LOCUS       DATDBY010000001         5056 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2039229, whole genome shotgun sequence.
ACCESSION   DATDBY010000001 DATDBY010000000
VERSION     DATDBY010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5056
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2039229"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1188
                     /locus_tag="VIT19_00005"
     CDS             <1..1188
                     /locus_tag="VIT19_00005"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY5837384.1"
                     /translation="TQRVLIAAEEYRLYSAVQSMIYLDNNATTQVAPEVFEAMQPFLT
                     SHYGNPSSGHALGRESRAAVEQARQEVADLLGARDANEIAFTSCGSESNNWAIGGFLE
                     QNPNRRHIITTRVEHEAVRKLCEHLGEIGCEVTWLEVDEQGSLDLDDLRKALRRDTGI
                     VSIMLANNETGVLFPIEEIGRIVREHSDAVFHVDGVQAAGKIPIKLREWEADLFSISG
                     HKFYAPKGIGALYIREGLKLPPFVIGGGQEHGRRSGTEAVPNIVALGRASKLAGDFLG
                     HEQLRALRDRLEDTILKTISDTTVNGSTEPHKRLPNTANISFDGVLGPDVVSMLDAAG
                     ICVSTGSACHSDSVDASPVLSAMKIPKSRALGSIRFSIGRYNTLAEIEQTLSALAQVV
                     VSR"
     gene            complement(1259..1723)
                     /locus_tag="VIT19_00010"
     CDS             complement(1259..1723)
                     /locus_tag="VIT19_00010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837385.1"
                     /translation="MIKLVSRFFLVFTLLGLFAITALAQTTHSVWSENKPFQARDGAT
                     GASFTTFVSGNATFAWTQATTRGFARAHVVVTPALNYDFQLVSITGSDNDTISGRWVI
                     RRNGAVVCNNCLGRAYGLNQPVGQYFKIYVGTALAYGEKWHYSGYITDRFDF"
     gene            1992..2987
                     /locus_tag="VIT19_00015"
     CDS             1992..2987
                     /locus_tag="VIT19_00015"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HEY5837386.1"
                     /translation="MSAAIQATNPDLRTELLNWRLRLEETAKTANGDFQLNGLLREVQ
                     SAIENLNRAESYGVCQVCHDLIGQAAMTADPLARFCLSCLTPHQLEELERDLDRAWLI
                     QGESLPKQNLKVNGWEVAHYYQPAGLVGGDYCDLIITDANELYFMIGDVSGKGIAASF
                     LMSRLHAIFRSLINTGLSVTELVERANGVFADTTMRPYYATLVCGKASANGTIEICNA
                     GHCAPLHLHDGIVTPIPATGLPLGMFCNQTYSATTIDAVKGDRLVLYTDGLSEARNHD
                     EEEYGKDRLQMMLNEFHEHPTESLLTRVVDDARKFAEGLPITDDLTLMAIELTGH"
     gene            3116..3634
                     /locus_tag="VIT19_00020"
     CDS             3116..3634
                     /locus_tag="VIT19_00020"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY5837387.1"
                     /translation="MLEDQKTEEHDLRKGGSRDRQLPKARHQRVRVLQTSDYVAVSPF
                     TPLSQAIEAMKSDEGGCVIVSDDGRVAGIFTERDLLTKVIGQQVDLNSPISQWMHPTV
                     ETLSPDATVGDAVKLMNEKGFRNIPLVRKGELIGLISVFDIITYLAECYPKATMNLPP
                     LPAQVMDTVEGG"
     gene            3747..>5056
                     /locus_tag="VIT19_00025"
     CDS             3747..>5056
                     /locus_tag="VIT19_00025"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HEY5837388.1"
                     /translation="MSAVLEPPVETIDKNLEELDTVTIRFAGDSGDGMQLTGTQFTNT
                     SAMMGNDISTLPDFPAEIRAPAGSLPGVSGFQLNFSNHDIRTPGDQPSVLVAMNPAAL
                     KVNLPDLEEGGTIIVNTDEFTKDNLEKAAYHSNPLEDGALTGYRVHHLPISTLNMNAL
                     KGAVELSRKEMARSKNFFALGVLYWLYDRPLEPTLDWVRAKFKKNPELVKANEVALKT
                     GYNFAETTEVFTTHYRVKKAVIAPGRYRKITGNEATAIGFVAAAELAGRPLFYGSYPI
                     TPASEILHELARHKNFGVKTFQAEDEIAAVCAAIGASFAGHVGLTGTSGPGVALKQEA
                     IGLAVMTELPLVIVNVQRGGPSTGLPTKTEQADLFQAVWGRNGECPAIVIAPSTPADC
                     FDMAIESVRLAFKYMVPVFYLSDGYLANGAEPWALPAIEKLPRI"
BASE COUNT         1152 a         1380 c         1436 g         1088 t
ORIGIN      
        1 acgcaaaggg ttctcatagc cgccgaagag tatcggttat actccgcagt tcaatcaatg
       61 atttatctcg acaacaatgc caccacgcag gttgcgcccg aggttttcga ggcgatgcaa
      121 cccttcctga cttcgcacta cggcaatccg tcttcgggac atgcgctcgg ccgcgagtcg
      181 cgcgcggcgg ttgaacaggc ccggcaggaa gttgcggatt tgcttggcgc tcgcgacgct
      241 aacgagattg ccttcacttc ctgcggctct gaatcaaaca attgggcgat cggaggattt
      301 ctcgagcaga atcccaaccg tcgtcacatc atcacgacgc gcgttgagca tgaagccgtg
      361 cggaagctat gtgagcatct cggcgagatt ggttgcgaag ttacctggct ggaagtcgac
      421 gagcagggtt cgctggatct tgacgatctg cgaaaggctc tgcgccgcga tactggcatc
      481 gtttcgatca tgcttgccaa caacgagacg ggcgttctgt ttccgattga agaaatcgga
      541 cgcatcgttc gcgagcattc ggacgccgtg ttccacgttg acggtgtcca ggccgccggc
      601 aagattccca tcaaacttcg cgaatgggaa gccgatctgt tttcaatttc aggtcacaag
      661 ttctacgcgc caaaaggcat cggcgcactc tacattcgcg aaggcttgaa gctgccgccg
      721 ttcgtcattg gcggtgggca ggagcatgga cgccgctcag gcacagaagc tgtcccgaat
      781 attgtcgcgc tcggccgcgc cagtaagttg gcgggggatt tccttggaca cgaacaactc
      841 agagcgttga gagatcgttt ggaggacaca atcctcaaga ccatttcgga cacgaccgta
      901 aacggctcaa ccgaaccgca taaaaggtta cctaacacgg ccaatatttc gttcgacggc
      961 gttcttggcc cggacgtcgt ctcaatgctg gacgccgccg gcatctgtgt ctcgacaggt
     1021 tcggcttgtc attcagattc tgtggacgcc tcgccggtgc tgagcgcgat gaagattcca
     1081 aagagccgcg cgctcggttc aattcgcttt tcgattggac gctacaacac cctggcggag
     1141 atcgaacaga cgctgagcgc cctcgcccag gtagtcgtat cccgataacg actgctgcgc
     1201 tgcgatagac cgccttagac ggcttcaaga atctcagtgt gcagtcagta attgggattc
     1261 agaaatcaaa tctgtcagtg atgtatccgc tgtaatgcca cttctcaccg taagccaacg
     1321 cggtacccac ataaattttg aaatattgtc cgaccggctg attaagcccg taggccctgc
     1381 cgaggcagtt gttgcaaaca acggcgccgt tgcgacgaat aacccagcgc ccggagattg
     1441 tgtcgttatc ggagccggtg atactgacca actgaaagtc gtagttcagc gccggagtca
     1501 caacgacatg ggcgcgtgca aaccccctcg tggtggcttg tgtccatgcg aaggtagcgt
     1561 tgccgctgac aaatgtagtg aaacttgcgc cagtcgcacc gtccctggct tggaaaggtt
     1621 tgttttcgct ccagacgctg tgcgtggtct gcgccagcgc ggtgattgcg aacaacccca
     1681 acagcgtgaa aaccaggaaa aatcgggaaa cgagtttaat catgagagtc ctcctttaag
     1741 attggaaaat ggcgacggta agatcgccca gatgaccctg gatcggtctt ttgtggggcg
     1801 aagtctactc tcggcattag tcgaaggcaa ggtttttatt tggcaacttt aagtggcaat
     1861 aatcggatag attgccatca aatttcgcgg caaaatgcgc gcgtgaaaac gaactccagc
     1921 gtggaaaaga gcgtataatt agctgactct ttttctcatc agaatcgcca cgaaagacca
     1981 ggggaacgaa catgagcgct gccatccaag ccaccaatcc tgacctgcga accgaactac
     2041 taaactggcg cctgcgtttg gaagagaccg ccaaaaccgc gaatggagat tttcaattga
     2101 acgggctgct gcgcgaagtt cagtcggcga ttgagaatct gaaccgggct gaatcgtacg
     2161 gcgtctgcca ggtctgtcac gatttgatcg gccaggccgc gatgactgct gacccattgg
     2221 cgcgattctg tctgagctgt ctgacaccgc atcaattgga agagctggag cgtgacctgg
     2281 atcgcgcgtg gctgattcag ggcgagtcac tgccaaagca gaaccttaaa gtgaacggct
     2341 gggaggtcgc ccattattat caaccggcag ggctcgtagg cggcgactac tgtgatctga
     2401 tcattactga cgcgaacgaa ctctacttca tgatcggcga cgtgtcgggc aaagggatcg
     2461 ccgcgtcgtt tttgatgagc cgcctgcacg ctatctttcg cagcttaatc aacacgggtc
     2521 tgtccgtgac cgaactggtc gagcgcgcca atggggtatt cgccgacaca accatgcgtc
     2581 cttactatgc gacgctggtt tgcggcaaag cgtctgcgaa cggcacgatt gagatttgca
     2641 acgccgggca ctgtgcgccg ctgcaccttc acgacggtat agtcacgccc attccggcga
     2701 ccggactgcc gctcggaatg ttctgcaacc agacttactc tgccaccacg attgacgcgg
     2761 tgaagggcga ccggttagtg ctctacaccg atggactctc tgaagctcga aatcatgacg
     2821 aggaggagta cggcaaagat cggttgcaaa tgatgctcaa cgagtttcac gaacatccga
     2881 ctgaatctct cctgactcgg gtggttgatg atgcgcggaa attcgcggaa gggctgccta
     2941 tcacagacga tctgaccttg atggcgattg aactgaccgg tcattgatga cgatttgcgc
     3001 ccgattcttt ccctgccccg gttcgtgcgg cagatcacat tcagccatcc tttcctgtga
     3061 taagatgacc ggctttcccg ccttagcagc ggaagtgagt tagaatcgac ttcggatgct
     3121 ggaagatcaa aaaacagaag aacacgattt gcggaagggc gggtcgcgtg accgtcaact
     3181 tcccaaggcg cgccaccagc gagtgcgcgt gctgcaaacg tccgactacg tcgcggtctc
     3241 tccattcact cccctgtccc aggcgattga agccatgaaa agcgacgaag gtggttgcgt
     3301 aatcgtttcc gacgatggac gcgtcgccgg aatctttact gagcgcgact tgctgacgaa
     3361 agtcatcggc caacaagtcg atttgaattc gccgatttcg cagtggatgc atcctacggt
     3421 cgagaccctt tcgccggacg cgaccgtggg cgatgcggta aagctgatga acgaaaaggg
     3481 ctttcggaac atcccactgg tcaggaaagg cgagttgatt ggattgattt ccgtgttcga
     3541 catcatcacc tacctggcag agtgttatcc gaaggcgacc atgaatctgc caccgctgcc
     3601 ggcccaggtc atggatacgg ttgaaggagg ctaatcagtg aatcgtaaat ggtaaatcgt
     3661 aaatagccgg ccgtttctat ttgcgatttg cgattcacga tttacgattt acgggtttga
     3721 ttcgaaagga atcacagaaa taaccaatga gcgcagtctt agaaccaccg gtcgaaacta
     3781 tcgacaagaa cctggaagaa ctcgacaccg tcacgattcg cttcgccggc gactcaggcg
     3841 acggcatgca gttgacgggg acgcagttca cgaatacgtc ggcaatgatg ggcaacgaca
     3901 tctcgacgct gcccgacttt ccggcggaga ttcgggcgcc cgcgggcagc ttgcccggcg
     3961 tcagcggttt tcagctgaat ttttccaatc acgacattcg cactccgggc gatcaaccga
     4021 gcgtcctggt ggcgatgaat cccgcggcgc tgaaagtaaa cctgccggac ctggaagaag
     4081 gcggcaccat catcgtcaac actgatgagt tcacgaaaga caatctcgag aaggccgcgt
     4141 atcactcgaa cccgctggaa gatggcgcgc ttaccggtta tcgcgtgcat catctgccca
     4201 tctcgacgct gaacatgaac gcgttgaaag gcgcggtcga gctttcacgt aaagagatgg
     4261 cgcgctccaa gaacttcttc gcgctcggag ttttgtactg gctttacgat cggccgcttg
     4321 agccgaccct cgattgggtg cgcgcgaaat tcaagaagaa tccagagctg gtcaaggcaa
     4381 acgaagtggc gctgaaaacc ggctacaact tcgcggaaac gaccgaagtc ttcactactc
     4441 actatcgggt taagaaggcg gtcatcgcgc cgggtcgtta ccgcaagatt acgggcaatg
     4501 aagcgaccgc catcggtttt gtggctgctg ccgaactggc gggccggccg ctcttctacg
     4561 gttcgtaccc catcacgccg gcctcggaga ttctgcacga gctggcgcgt cacaaaaatt
     4621 tcggcgtcaa gacttttcaa gctgaagacg aaatcgccgc cgtttgcgca gctatcggcg
     4681 cgagcttcgc cggtcacgta ggactgacgg gaacctcagg ccccggcgtt gctctgaagc
     4741 aggaagcgat cgggttggcg gtgatgacag agttgccgct cgtgattgtg aatgtccagc
     4801 gcgggggtcc atcaaccggc ttgccgacaa aaaccgagca ggccgatctg ttccaggccg
     4861 tctggggacg taacggcgag tgtcccgcga tcgtgatcgc tccatcgact ccagccgatt
     4921 gtttcgacat ggcgatcgaa tcggtgcggc tggctttcaa atacatggtg ccggttttct
     4981 atctctcgga tggttatctc gcgaatggcg ccgagccatg ggccctgccc gcgatcgaaa
     5041 aactgccgcg catcga
//
LOCUS       DATDBY010000002        10437 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2037529, whole genome shotgun sequence.
ACCESSION   DATDBY010000002 DATDBY010000000
VERSION     DATDBY010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 10437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10437
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2037529"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VIT19_00030"
     CDS             <1..382
                     /locus_tag="VIT19_00030"
                     /inference="COORDINATES: protein motif:HMM:NF019887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HEY5837389.1"
                     /translation="TRSDGMGLAKLTALGIATVVISTEPNPVVSARSRKLKIDCIQDC
                     ADKRAAIDQVAGNLGLTLEQVAFVGNDINDLPCLTAVGLPIVVGDAHPDVVQWAAYQT
                     KKLGGYGAVREVCDLFEAVWRGES"
     gene            383..1183
                     /locus_tag="VIT19_00035"
     CDS             383..1183
                     /locus_tag="VIT19_00035"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY5837390.1"
                     /translation="MLKNLFDVEDKIVIVTGGWGQLGREFTSALSARGARVAIFDIAA
                     GETSDFDFRERILAIEADVTSRASIEAGLKQVTSAWGVPHALINNAGLDSPPNAPIEE
                     TGPFESYPESSWDKVMAVNSKGVFLCCQVIGGAMANAGRGSIVNINSIYGLISPDQRI
                     YEYRRAQGDQFFKPAAYSASKSSLLNLTRYLATYWAGRGVRVNTLTLAGVFNNQDPQF
                     LEPYTARVPLGRMAGPDEYNGAVVFLISDASSYMTGANMIVDGGWTAW"
     gene            1186..2667
                     /locus_tag="VIT19_00040"
     CDS             1186..2667
                     /locus_tag="VIT19_00040"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY5837391.1"
                     /translation="MANPQQIKAPAEILNWINGKERPALSGEFFEKLNPADGTVMSRV
                     ARSRSADVAEAVAAAQAAQGGWANVPPVKRGELLLAIAMRLQAQREAVAQIVAAETGK
                     SVRDALGETDGAIAQGVFMAGEGQRLYGRTTTSAVPNKHAMTVRQPMGIAGLIIAANT
                     PIANVAWKVFPALICGNAVVLKAAEDTPATAWAFSKIAHDAGLPPGVLNVVNGYGEEA
                     GAPLVQHEHVSVVSFTGSTAVGRRIAVEAGQRLAKVSLELGGKNPLVVCDDANLEDAV
                     KWVLLSAFSNAGQRCASGSRIIVYDAVYDDFRKLLIERCVEMKVGTADDDDFGPVINE
                     RQLLNMLAAIEQAKNAGASVITGGQRLTDPEHRAGFYLAPTVIEQADPGDEISVKELF
                     GPIAVLYRVKNFAEALALANNSPYGLTACIHTRNLHRAVEFATKVQAGMAVVNAGTFG
                     SEPHMPFGGVKQSGNGSREPGVEALDIYSNLKNVYISIDPEQV"
     gene            2673..3434
                     /locus_tag="VIT19_00045"
     CDS             2673..3434
                     /locus_tag="VIT19_00045"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF014409.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase family
                     protein"
                     /protein_id="HEY5837392.1"
                     /translation="MAAETAPSAIALVPARAGSKRVPDKNVRLLSGHPVLAYTIAAAR
                     ESGVFAAVVVSTDAEEYGEIARHYGAEVPFTRPPEIAGDLSPDIEWVDYTLTKLRAQG
                     RVYDCFSILRPTSPFRQADTIRRAWNQFLSEEGVDSLRAVEKCKQHPGKMWVVQQNRM
                     TPLLPLTPGELPWHSRQYQSLPEIFVQNASLEIAWSRVVFESRSISGTVLMPFFTEGY
                     EGFDINDPIDWRRAQDMVETGDAHLPHVSQSRYPA"
     gene            3447..5363
                     /locus_tag="VIT19_00050"
     CDS             3447..5363
                     /locus_tag="VIT19_00050"
                     /inference="COORDINATES: protein motif:HMM:NF012670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEY5837393.1"
                     /translation="MVNISLIPLDEFRRVRSATAPREKTLALLADMCRANTLASVKRA
                     GSGHLGSSFSSLDIVTLLYYQEMDMTGIGARDPNRDIYFSSKGHDAPGQYSVLFSCGI
                     LPKEQFVRLRRLGGTYGHPDVTTPGVEANTGSLGMGISKGKGFAFGKRARGWAGRVFV
                     MTGDGELQEGQIYESLQSAVTQNLTNLTVIVDHNKVQSDQQVSQISDLGDLEAKFRAF
                     GWHVARCCGHDFSALSRVFDEFRTTNDKPKVLIADTIKGRGVSFMEHPQALKAGGGFY
                     RWHAGAPDDESFVSGYEEIVRRINSNLLELDLAPLKLEEYPTEAKVDSSVSTEYVVDA
                     YGEALADVAKDHENLIVLDADLTADCRLKRFKAEYPERFIQNGIAEQDMVSMAGGLAL
                     AGFLPVVNTFASFLSARANEQIYNNGCEQTRIIYVNHYGGLIPGGPGQSHQSIRDISL
                     LGSLPNFVIVQPCNAAETREAVEYGVAKCEDNFVLRLAIGPSPRIIDLPDGYRLTLGR
                     GVALTEGEDAVLFAYGPVMLNEALIAAEALRARGFRLKVVNMPWLNRVDEQWLTETVE
                     PSSAIYVLDDHAPVGGLGDTLLNQLMRANLLQNRTFKKFAVNGYPACGTPREVLNFHG
                     LSGQSMAAQIGGKH"
     gene            5368..7080
                     /locus_tag="VIT19_00055"
     CDS             5368..7080
                     /locus_tag="VIT19_00055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837394.1"
                     /translation="MSSLPRRVWHRLNRWPEDPYPKWEKLLRADSRFWNEAVQNAKNG
                     PRILIATSAGGFRPGAIVESTLAAALTLRGANVEILLCDEVLPACIQSLVTQSDSREQ
                     SSELAGRRSQEKLCADCFTPGNSMYESLGLPIHRYSQFVSTDERAAARALASTHPRDE
                     IGDYRLDGIAVGEHALAGALRFFASGNLNAEPNAEPILRRYFEASLLTTYATRRLLET
                     TDYAAACFHHGIYVPQGLIGEVARAKDVRVVNWNPAYRKKCFIFSHHDTYHHTLLDEP
                     TSHWENIEWNSAMEDELMGYLKSRWHGTQDWIWFHEKPEEDLATIAAELGVDFNRPCI
                     GMLTNVMWDAQLHYRANAFPNMLEWVIQTIRYFIGRPELQLLIRVHPAEIRGNLPSRQ
                     PLVAEIQREFPRLPGNVIVIQPESQVSTYAAMAQCDSVIIYGTKTGVELASMGIPTIV
                     AGEAWIRNKGITRDAATAEQYFQLLDQLPGKTRMSDSEIERARKYAYHFFFRRMIPLS
                     FMEENKGGSPFRVNLQSITQLLPGREPGLDVICNGILNGSEFIYPAEHGGKPRTPEPM
                     YAHS"
     gene            7227..8042
                     /locus_tag="VIT19_00060"
     CDS             7227..8042
                     /locus_tag="VIT19_00060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837395.1"
                     /translation="MELRHLSERDSNNLSDYGFRVFSQWGEDGMIQFLLKHVAPENKI
                     FVEFGADAYIFESNTRFLLTNDNWRGLIIDSNERAFEDLKRNRAWELYDLTAVQAFIT
                     RENINELLTQHGISGEIGLLSIDIDGNDYWVWQAINVIQPVIVIAEYNHRFGPDRAVT
                     IPYDAKFDRKAAHPSSLYFGASLRALCKLGKAKGYALVGCNGVNAFFVRADKKPQMLK
                     ELTPAEGFVPGKFGQPFQRNGQTIKLTPEEESAFLQNLDLPLVDVSNQELSQN"
     gene            8254..9528
                     /locus_tag="VIT19_00065"
     CDS             8254..9528
                     /locus_tag="VIT19_00065"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5837396.1"
                     /translation="MKIAVWYNLPSGGAKRALYNHVRALVERGHTVEAWCPPTADRTY
                     LPLGELVREHVVPATRRRASSPYSPSNLLRLRTVNMLWLEENDEYARLCAEEINRGDF
                     DLLFANTSLEIAVSSIGRHVRAPSVLYLQEPSRWLYEAQPELAWAAPPPNGRAFWTPR
                     GIKNFLHDTVRVHGFRVQAREEWVNARAFDAMLVNSFFSRESVLRTYGVDARVCYLGV
                     DNSKFVNLHLPRENFVVGVGAVAPRKNVRLVIESLALIGEPQRPRLVWIGDTSKPEHF
                     EELKELARARRVDFVVEVRITDDALIDYLNRAAMMVYTPRLEPFGYAPLEANACGMSV
                     VGVAEGGLKETVVDGVTGLLVEHDDPHQIAAAVEHLLRNPDVASKLGENGERLVAERW
                     TVDAAAGRLEGRLLETLQEVRAQRGSTQKGEG"
     gene            9525..>10437
                     /locus_tag="VIT19_00070"
     CDS             9525..>10437
                     /locus_tag="VIT19_00070"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY5837397.1"
                     /translation="MKGGRELAGGGHLQQPPSNDIVVGEVEVPVKLSFVIANWNGGDL
                     LKACVASIENYPPAIPWEIIVVDNASTDGSCEWLRSLAEDRSPKGIPLRLIENAENVG
                     FGKANNQAFAVSKSDFLFLLNADAELTAGACDALVETLSSSDQIGACGPRLLNSDGSL
                     QPSVWRNPPSAREMIVGSLGLWRLIPRRLRGELLLGGHWDHATRREVPLLFGAAILAK
                     RKMIDEVGGFDERFHMYSEDREWCFRIVRAGWQLVFDPTASVVHHGAQFSLQRWTSME
                     KLRVQIQSNFQYNRYCLSRGQSIAYLLA"
BASE COUNT         2250 a         2810 c         3132 g         2245 t
ORIGIN      
        1 tacgcgtagt gacggcatgg gcctggcgaa gcttaccgcg ctggggattg ccaccgtcgt
       61 catctcgacc gagccgaacc cagtagtttc cgcgcgcagt cgcaagctga agatcgattg
      121 cattcaggat tgtgcggaca agcgcgcggc catcgatcaa gttgccggca acctgggtct
      181 aacgcttgag caggttgcgt tcgtgggaaa cgacattaac gacctgccct gtctaacggc
      241 cgtcggactg ccgatcgtcg tcggtgacgc tcatcctgac gtcgtgcagt gggctgcata
      301 tcaaacgaag aagttgggtg gatacggcgc ggtgcgggaa gtgtgcgatt tgtttgaagc
      361 cgtttggcgc ggcgagagtt aaatgctgaa gaacctcttc gacgttgaag acaagatagt
      421 gattgtcacc ggcggttggg ggcagctcgg ccgggagttt acgagtgccc tcagcgcccg
      481 cggcgctcgt gtagcaatat tcgacatcgc cgcaggcgag acatctgatt tcgacttccg
      541 agagcggatt ttggcgatcg aggctgacgt aacgagccgg gcttcgatcg aagccggact
      601 gaaacaagtg acctccgcgt ggggcgtgcc gcacgcgctc attaacaacg ccggcctcga
      661 ttcaccgcca aacgctccca tcgaagaaac aggtcccttt gagtcctacc ctgagagttc
      721 gtgggacaaa gttatggcgg tgaactcaaa gggcgtcttt ctatgttgcc aggttatcgg
      781 cggcgcgatg gcaaacgccg gccgcggttc gattgtgaat atcaactcga tctacggttt
      841 gatttcaccg gatcagcgca tttatgagta tcgacgcgct caaggcgacc agttctttaa
      901 acccgcggct tactccgctt cgaaatcgtc gctgctaaac ctgacgcgat acctggcaac
      961 gtattgggcc ggccggggcg tgcgcgtcaa tacgttgacg ttggcgggcg tctttaacaa
     1021 ccaggatcca caattcctgg aaccgtatac ggctcgcgtc ccgctgggca gaatggccgg
     1081 tcccgacgaa tacaacggcg ccgtagtttt tttgatttcc gatgcgtcgt cttacatgac
     1141 cggcgcgaac atgatcgttg atggcggctg gaccgcgtgg taagcatggc aaacccccag
     1201 caaataaagg cgcctgcgga aatcctgaac tggattaacg gtaaagagcg gccggcgctt
     1261 tcgggcgagt tctttgagaa gctgaatccc gccgacggta ccgtgatgtc gcgggtcgcc
     1321 cgttcgcgca gtgccgatgt ggctgaagcg gtagcggcgg cgcaggcggc ccagggtgga
     1381 tgggcaaatg tgcccccggt aaagcgcggt gaactgctgt tggcgatcgc tatgcgtttg
     1441 caagcgcaac gcgaagccgt ggcccaaatc gttgccgctg agactggcaa atctgtccgg
     1501 gatgctttag gggaaaccga cggagcaatc gcgcagggtg ttttcatggc gggtgaaggc
     1561 cagcggctgt atggccgcac cactacatcg gcggtgccga acaagcacgc gatgaccgtc
     1621 cgccaaccga tgggcatcgc cggattgatc atcgctgcca acacgccaat cgcgaatgtt
     1681 gcctggaaag tgtttcccgc gttgatctgc ggaaatgctg tcgtgttgaa agcggctgaa
     1741 gacactccag caacagcctg ggccttcagc aagattgctc acgacgcagg tctgccgcca
     1801 ggtgtgctca acgtcgtgaa cggttacggc gaagaagccg gcgcgccatt ggtgcagcat
     1861 gagcacgtca gcgtcgtaag tttcaccggt tcaactgccg tcggacgacg cattgcggtc
     1921 gaagccggac agcggctcgc aaaggtttcg cttgaacttg gcggcaagaa ccctttggtg
     1981 gtttgtgacg atgccaacct cgaggatgct gtcaaatggg tcttgttgtc ggctttcagc
     2041 aacgccggac agcgttgtgc ttcgggcagt cgcatcatcg tctacgatgc cgtctacgac
     2101 gattttcgca agctgctgat tgagcgctgc gtagaaatga aagtcggaac ggcagacgat
     2161 gatgattttg gtccggtaat taatgagcgc cagctgctta acatgttagc ggcgatcgaa
     2221 caggcgaaga acgcgggggc cagcgtcatt accggcggtc agcggcttac ggatccggaa
     2281 caccgcgcag gcttttacct ggcgccgact gtcatagagc aggccgatcc cggcgacgag
     2341 atttccgtga aggagttgtt tggcccaatc gcggttctgt atcgcgtaaa aaacttcgcg
     2401 gaagcgctgg ccctggcgaa caactcgccg tatggcctga cggcgtgtat tcacacgcgt
     2461 aacttgcacc gcgcggtcga attcgcgacg aaggtccagg ccggcatggc ggtggtgaat
     2521 gcgggaacat ttggcagcga gccgcacatg ccgtttggcg gcgttaagca gtcgggaaac
     2581 ggttcgcgcg aacccggcgt tgaagcgttg gacatttatt ccaatctcaa gaatgtctac
     2641 atcagcattg atcctgaaca ggtgtgatgt gcatggctgc tgaaactgct cccagcgcaa
     2701 tcgctctggt tcccgcccgt gccggctcaa agcgcgtgcc tgacaagaac gttcgtttgt
     2761 taagcgggca tccggttctc gcatacacga tcgctgctgc tcgcgagagc ggcgtgtttg
     2821 ccgccgtcgt agtctcaacc gatgcagagg aatacggcga gatcgcccgt cattatggcg
     2881 ctgaggttcc gtttacccgg ccaccggaaa tcgcgggcga tctttcgccg gacattgagt
     2941 gggtcgatta cactttgaca aaacttcgcg cgcagggtcg ggtctatgat tgtttcagca
     3001 tcctgcgccc gaccagtccg tttcgacaag cagacaccat tcgccgcgcg tggaaccaat
     3061 ttctcagcga agagggggtt gattcattgc gggccgtcga gaaatgcaag cagcaccctg
     3121 gcaagatgtg ggtcgtgcag caaaacagaa tgactccctt gctgccgtta acaccaggcg
     3181 agttgccctg gcatagccgg cagtaccaat cactgccgga gatttttgta caaaacgcca
     3241 gcctggaaat cgcgtggtcc cgagtcgtct tcgaaagtcg ttcgatttcc ggcacggtac
     3301 tcatgccgtt ttttactgaa ggttacgaag ggttcgacat taacgatcca atcgattggc
     3361 gacgcgctca ggatatggtt gaaaccggcg acgcccattt gcctcacgtc tctcaatctc
     3421 ggtatcctgc ttaactcaaa aaactgatgg tcaatatttc gctcataccc ctcgatgagt
     3481 tccggcgagt tcgctccgct acggcgccac gagaaaaaac actcgcgttg ctggctgata
     3541 tgtgtcgcgc caataccctt gcctcggtca aacgtgcagg ctcagggcac cttggctcga
     3601 gttttagttc cctcgacatt gttactttgc tctattacca ggaaatggat atgaccggca
     3661 tcggcgcgcg agatcctaat cgtgacatct acttttcttc caaaggtcac gacgcgccgg
     3721 gccagtattc agttctgttc tcgtgcggca ttctcccgaa ggaacagttt gtgcgactcc
     3781 gccggttggg gggcacctac ggccatccgg acgtgaccac tcccggcgtt gaagcaaaca
     3841 caggctcgct cggcatgggg atcagcaaag gtaaaggctt tgcgtttggt aaacgcgcgc
     3901 gtggctgggc gggtcgagtt tttgtgatga ctggagacgg cgagttgcag gaaggccaga
     3961 tttacgaatc gcttcaaagc gcggtcaccc agaacctaac gaatctcacg gtcatcgtcg
     4021 atcacaataa agtgcaatcg gatcagcagg tcagccaaat cagcgacctc ggagatctgg
     4081 aagcgaaatt ccgagccttt ggttggcacg tggcgcgctg ttgcggccac gacttttctg
     4141 cattgtcgag ggtctttgac gagtttcgga ccactaacga taagccaaaa gttctcatcg
     4201 ccgacacgat caaaggccgt ggagtttcgt tcatggagca tccacaagcc ctaaaggccg
     4261 gcggaggttt ttaccggtgg cacgcaggtg cgccggacga cgagtcgttc gtttccggat
     4321 acgaagagat cgtgcgccgg atcaatagca atttgctgga actggatctg gcgccgctga
     4381 agctcgagga gtatcccacg gaggccaaag tcgacagcag cgtctctact gagtatgtgg
     4441 tcgatgcgta cggtgaagcc ctggctgacg tcgctaaaga ccacgagaat ctgatcgtgc
     4501 tggatgctga cctgacggcc gactgccgct tgaagagatt caaagctgaa tatcccgagc
     4561 gattcatcca gaacggaatt gccgaacagg acatggtttc gatggccggc ggattggcct
     4621 tagcgggctt tctgcccgtc gttaacacgt tcgcctcgtt tctgtccgcc cgcgccaacg
     4681 agcaaatcta caataacggt tgcgagcaga ctcggatcat ctacgtgaac cattatggcg
     4741 gattgatccc gggggggccg gggcaatctc accaaagtat tcgcgacata tccttactcg
     4801 gctcgctccc aaacttcgtg atcgtccagc cttgtaatgc ggccgaaacg cgagaggcag
     4861 ttgaatatgg agttgcgaaa tgcgaggaca attttgtcct gcgtttggca attggaccgt
     4921 cgccgagaat tattgatttg cccgacggct atcgattgac actcggccgc ggggttgcat
     4981 taacggaagg tgaggatgca gtgctctttg cctatgggcc ggtaatgttg aatgaagcgt
     5041 tgattgccgc tgaggccttg cgtgcgcgcg gtttccgttt gaaagttgtg aacatgccgt
     5101 ggctaaatcg cgttgacgag cagtggctga ccgaaacggt tgagccttcg tcggcgattt
     5161 atgttctgga tgatcacgcg cccgtcggag ggcttggcga cacgttgttg aatcaactca
     5221 tgcgagcaaa tctgctccag aaccgaacgt ttaagaagtt cgcagtcaac ggatatccag
     5281 cgtgcggaac gcctcgcgag gttctgaact ttcacgggct cagcggtcaa tcgatggcgg
     5341 cgcaaatcgg tgggaagcat tagcattatg agttcactgc cgcgaagagt ttggcatcgc
     5401 ctgaatcgtt ggcccgaaga tccatatccg aagtgggaaa aacttttgcg cgcggacagc
     5461 cgcttttgga acgaagcggt ccagaatgcg aagaatggtc cgcgcattct gatcgccacg
     5521 agcgccggcg gctttcgccc gggcgcaatc gtcgagagca cgctcgctgc cgcgctgacg
     5581 cttcgcggcg ccaatgttga gatcctgctt tgcgacgagg tgcttccggc atgcatccag
     5641 tcactggtta cgcaatcgga ttcgcgcgag cagtcgtccg aactggccgg gcgcaggtcg
     5701 caggagaagc tttgcgccga ctgcttcacc ccgggcaact cgatgtacga atcgcttggg
     5761 ctaccaattc atcgctacag tcagttcgtc tcaacagacg aacgcgcagc ggcccgggcc
     5821 cttgcttcaa cgcatccacg agatgagatt ggcgattacc ggcttgacgg catcgcggtc
     5881 ggcgagcatg cgctcgccgg cgcgctgcgg ttctttgcga gcggcaacct gaacgctgag
     5941 ccgaacgctg aaccgatcct gcgccggtac ttcgaagcct cactgctgac gacgtacgcg
     6001 acacggcgtt tgctggagac aactgattac gccgcggcct gtttccatca cgggatttat
     6061 gtcccacaag gactaattgg cgaagtcgcg cgcgcgaagg atgttcgcgt cgtcaactgg
     6121 aacccggctt accggaagaa gtgtttcatc ttcagtcatc acgatactta tcaccacacg
     6181 ctgctcgacg agccgaccag tcactgggaa aacatcgaat ggaatagcgc gatggaagac
     6241 gagttaatgg ggtatttgaa gagccgttgg cacggcacgc aggattggat ttggtttcac
     6301 gaaaagccgg aggaggatct cgcgaccatt gctgccgaac ttggcgtaga tttcaatcgg
     6361 ccgtgcattg gcatgctgac caatgtcatg tgggacgcgc aactgcacta tcgagcaaat
     6421 gcgttcccca atatgttgga atgggtaatc caaaccatca ggtactttat cggacgtccg
     6481 gagctgcaac tcctaattcg cgtccacccg gccgaaattc gcggtaattt gccttcgcgc
     6541 cagccgctcg tcgcggaaat tcagcgggaa tttcctcgcc ttccgggaaa tgttatcgtg
     6601 attcagccgg agagccaggt gagcacgtac gcagcaatgg cgcaatgcga ctctgtaatc
     6661 atctacggca caaaaaccgg agtcgaactc gccagcatgg gaattcctac gatcgtcgcc
     6721 ggcgaggctt ggattcggaa caaaggcatt accagggatg ccgccacagc cgaacagtat
     6781 tttcaattgc tggatcagtt gccgggcaag acgcggatga gtgattcgga aattgagcgc
     6841 gcacgcaaat atgcttatca tttctttttt cggcgcatga ttccgctgtc gttcatggag
     6901 gaaaacaaag gaggaagtcc attccgcgtt aacctgcaaa gcatcacgca gctcttgcca
     6961 ggccgcgagc caggtctcga cgtaatttgc aacggcatct tgaacggaag tgagtttatt
     7021 tatccggcgg aacatggcgg aaaaccaaga acaccggaac cgatgtacgc gcattcgtag
     7081 ttaaccgaca agttaccgac tcttcacccc aaggcatgtt tctgtttcac ccaatcaaat
     7141 ccagtaaggc aatcctcagg tcgttcgatt tccgcttgca acgtatcgag tggcgcctgg
     7201 agtccattca agaagcgctc ggaaggatgg agctgcgaca ccttagtgag cgagacagta
     7261 acaacctcag tgattacggg tttcgcgtgt tctcgcaatg gggcgaggac ggaatgattc
     7321 agtttttgtt gaaacacgtc gcccccgaga acaagatatt cgtcgaattc ggagcggatg
     7381 cctacatttt tgaatcaaac acgcgctttc tgcttaccaa tgacaattgg agaggcttga
     7441 taattgatag taatgaacgc gcctttgaag acttaaagag aaatcgtgcc tgggagctgt
     7501 atgatctgac ggcagttcag gcgttcatca ccagagaaaa cattaacgaa ctcctgacac
     7561 aacacggaat cagcggcgaa attggtctgc tctcgatcga tatcgatgga aatgattatt
     7621 gggtttggca ggccatcaat gtgatacaac cggtaatcgt gatcgctgaa tacaatcacc
     7681 gctttggccc ggatcgggcc gtgactattc catacgacgc aaagtttgat cgtaaggcag
     7741 cacatccgtc cagtctttat tttggagcct cgttaagagc tctctgtaag ctcggaaaag
     7801 cgaagggtta cgcactggtc ggatgtaacg gggtgaatgc gttctttgtg cgcgccgaca
     7861 aaaaaccgca gatgcttaaa gaactgaccc ctgcggaagg atttgttccg ggcaaattcg
     7921 gccagccgtt ccagcgaaac ggtcaaacaa tcaaacttac cccggaagag gaatccgcat
     7981 ttcttcagaa tttggatctg ccgttggtgg acgtatcaaa ccaggaatta agccaaaact
     8041 aaacgcatca ctatgattcg attggacaag atagcgcccg tcttgcgtca ctcgcgccat
     8101 tcagtcaaaa gttggtaggt ctgccggacg acgggcgcac cgactgtcgc cgcgtgtcgg
     8161 aggcaggaat cgcagcgaag gccgaagtac agcaggcgca gcctgtttgc tgaagcgggt
     8221 cttcggcgcg gtggcggaca caaagatggt gagatgaaga ttgcggtctg gtacaactta
     8281 ccgagcgggg gcgcgaagcg cgcactgtac aaccacgtgc gcgcactcgt tgagcgcggc
     8341 cacacggtcg aggcgtggtg cccgccgaca gcggatcgga cttacctgcc gttgggtgag
     8401 ctcgtgcgcg agcacgtagt tcccgcgaca cgacggcggg cctcttcgcc ctactcgcct
     8461 tcgaatctcc tgcgcttgcg caccgttaac atgctctggc tcgaagagaa cgacgagtac
     8521 gcgcgcctgt gcgccgagga gatcaaccgc ggcgacttcg atctactctt cgccaacacc
     8581 tcgcttgaaa tcgccgtcag ttcaatcgga cgccatgtcc gtgcccccag cgttctgtac
     8641 ctccaggagc cctcacgctg gctctacgag gcgcagccgg agctggcgtg ggcggctccg
     8701 ccccccaacg gcagagcgtt ttggacgccg cgcggaataa aaaacttcct gcacgacacg
     8761 gtgcgtgtgc acggcttccg cgtgcaggcg cgggaggagt gggtgaacgc gcgggcgttc
     8821 gacgccatgc tcgttaactc cttcttcagc cgcgagagcg tcctgcgcac ttacggtgtg
     8881 gacgcaaggg tctgctatct cggcgttgac aacagcaagt tcgtcaacct ccacctgccg
     8941 cgtgagaatt ttgtcgtcgg cgtcggggcc gtcgcgccgc gtaagaacgt gcggctcgtg
     9001 attgagtcgc tggcgctcat tggcgagcct cagcgcccgc gcctcgtgtg gattggtgac
     9061 acttccaagc cggaacactt tgaggaactg aaggaactgg cgcgtgcgcg ccgggtcgat
     9121 ttcgtcgtgg aggttaggat taccgacgac gcgctgatcg attacctgaa ccgcgccgcg
     9181 atgatggtct acacgccgcg gcttgagcct ttcggctacg cgccgctgga ggcgaacgcc
     9241 tgcgggatgt ccgtagtcgg cgtggccgag ggcgggctga aggagacggt tgtagacggc
     9301 gtcaccggcc tgcttgtcga gcacgacgac ccgcaccaga tcgccgccgc ggtcgagcac
     9361 cttttgagga accccgacgt tgcctcgaaa ctcggcgaga acggcgagcg gctggtggcc
     9421 gagcgctgga cggtcgacgc ggcagcgggg cgcctcgaag ggcgcttgtt ggaaacgctc
     9481 caagaggttc gtgcgcagcg gggcagcaca cagaaaggtg aagggtgaag ggcggcaggg
     9541 agttggcggg cggcggacat ctgcagcagc ctccgtcgaa cgacatagtt gtcggggaag
     9601 tcgaagtgcc ggtcaaatta tcttttgtca tcgcgaactg gaatggcggc gatttgctaa
     9661 aggcgtgtgt cgcgagcatc gaaaattatc cgccagctat tccctgggag atcatcgtcg
     9721 ttgacaacgc ttcgaccgat ggcagctgcg aatggcttcg ttcgttagcg gaagacagat
     9781 cgccgaaagg aattccgctc cgcttgattg agaatgccga gaatgtcgga ttcgggaaag
     9841 ctaataatca ggcgtttgcg gtcagtaaaa gtgatttcct gtttctgctc aacgccgatg
     9901 cggaactcac tgccggcgcg tgcgatgcac tggttgagac actttcgtcc agcgatcaaa
     9961 tcggagcttg cggtccgcgg ttgttgaatt ctgacggttc tttgcaaccc agtgtctggc
    10021 ggaatccgcc cagcgcgcgg gagatgattg ttggcagcct gggtttatgg aggctaatcc
    10081 cgcggcgttt gcgcggggaa cttttgctcg gtggtcactg ggatcatgca acgcgccggg
    10141 aggtcccact gctgttcggc gcggctatcc tggccaagcg aaaaatgatc gacgaggtcg
    10201 gtggctttga tgaacgattt catatgtaca gcgaagaccg ggaatggtgt tttaggattg
    10261 tgcgtgccgg gtggcaattg gtgttcgatc caaccgcctc ggtcgtgcat cacggggccc
    10321 agttttcgtt acagcgctgg accagcatgg agaaactgcg agtgcaaatt caatcgaact
    10381 ttcaatataa tcgttactgc ctatcgcgcg gacaaagcat tgcttacctg ctggcca
//
LOCUS       DATDBY010000003         2335 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_204371, whole genome shotgun sequence.
ACCESSION   DATDBY010000003 DATDBY010000000
VERSION     DATDBY010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204371"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..846)
                     /gene="argH"
                     /locus_tag="VIT19_00075"
     CDS             complement(<1..846)
                     /gene="argH"
                     /locus_tag="VIT19_00075"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEY5837398.1"
                     /translation="MHDGQSPKLWGGRFTGQADRGFAEFNQSFSFDRRLFQADIHASV
                     AHCEGLVSAGVLTAAEAEQIKFALNQIGEAGKTNPNYFNELPSEDVHSFVEARLVQMI
                     GDAGRKLHTGRSRNDQVATDLRLWLRDDIDRLQDSLRDTQLALLEFAEANQAVVLPGY
                     THLQRAQPILLAHWCLAYFEMLARDRARLADVRKRVNVMPLGSAAVAGTSYAIDREAV
                     ARSLGFDSVSRNSLDAVSDRDFVIEFVSAASLFMVHLSRLAEDVILYTTTEFGFFELG
                     DAVATG"
     gene            930..1343
                     /locus_tag="VIT19_00080"
     CDS             930..1343
                     /locus_tag="VIT19_00080"
                     /inference="COORDINATES: protein motif:HMM:NF014864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837399.1"
                     /translation="MIKRERQKRILNLIRAKRIGTQEELRAELERSGVPATQSSVSRD
                     LDELGVVKHHGFYALPQANGDAARGLVSLDVAGDVLVIAKCLPGRASAVAVEIDDAAM
                     AEIVGTLAGEDTIFIATHDQKSQRAVMKRIWEMFQ"
     gene            1405..>2335
                     /locus_tag="VIT19_00085"
     CDS             1405..>2335
                     /locus_tag="VIT19_00085"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF001770.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEY5837400.1"
                     /translation="MTSKTINKIVLAYSGGLDTSVMLHWLKEKYQCEIVCYCADVGQG
                     AEMDGLEEKAKATGASKLYIEDLREEFVRDYVWTSVKANAVYEGVYLMGTSLARPVIA
                     KRQIEIARLENADAVAHGATGKGNDQVRFELTYYALQPDIKVIAPWREWEFGGRTDLI
                     AYAESYGIPVTATIDKPYSTDANLMHVSYEGGILEDPWAEPPENIFQMTVSPERAKDE
                     AEYIEIGFEKGEPVSVDGEQLDPVSLLSKLNEIGGAHGIGRVDLVENRFVGMKSRGVY
                     ETPGVTILHAAHRALESITMDREVMHLRDSFGVK"
BASE COUNT          537 a          609 c          705 g          484 t
ORIGIN      
        1 acccgtggcg accgcatcgc ctaattcgaa aaacccaaat tccgtcgtgg tgtagagaat
       61 cacgtcttcg gccaggcgcg agagatgcac catgaatagc gacgccgcgc tgacaaactc
      121 aatcacgaag tcacggtcac tgaccgcatc cagactgttc cgtgaaactg agtcgaatcc
      181 aagcgagcgc gccaccgctt cgcgatcgat cgcataagaa gttccggcca cggcggcgga
      241 gccgagcggc atcacattaa ctcgtttacg aacgtcggca agccgcgcgc gatcacgcgc
      301 cagcatttca aaataagcga gacaccaatg cgctaaaaga ataggttggg cccgttgcag
      361 atgagtgtag ccgggaagca cgaccgcttg attggcttcc gcgaattcaa gcagagcaag
      421 ttgagtgtca cgcagcgaat cttgtagacg atcaatgtcg tcgcgcagcc agagacgcag
      481 atcagtggca acctgatcgt tccggctgcg gcccgtgtgc agcttgcggc cggcgtcgcc
      541 aatcatctgc accagccgag cttcaacaaa cgaatgcaca tcttccgacg gtagctcgtt
      601 gaaatagttg ggattcgttt tcccggcttc gccgatttgg ttgagagcaa atttgatctg
      661 ttcggcttca gcggccgtca ggactcccgc gctgactagg ccttcgcaat gcgcaacgct
      721 ggcgtggatg tccgcttgaa atagccggcg gtcgaacgaa aacgactgat tgaattcggc
      781 aaatccgcga tccgcttgcc cggtgaagcg gcctccccac agtttcggcg attgaccatc
      841 gtgcataatt gctgtagttt atgcagctat gcggataaaa tgcaactatt ctgcatcagc
      901 aggcgtctga agaatcggct acgcgtcgga tgataaagcg agaacgacag aagcgcattc
      961 taaatcttat tcgggcgaag cgcattggta cgcaggagga acttcgcgct gaactcgagc
     1021 ggtcgggcgt accggccacc cagtccagcg tctcgcgcga tttggatgag ctgggcgtcg
     1081 tgaagcatca cggcttttac gcgctgccac aggcgaatgg tgacgcggcg cgcgggttgg
     1141 tgagtctgga cgttgcgggt gacgtgctgg tgattgcgaa gtgtttgccc ggccgggctt
     1201 ccgcggtcgc cgttgagatt gacgacgccg cgatggcgga aatcgtcggc acgctggccg
     1261 gtgaagacac aatcttcatc gcgacgcacg atcagaaatc acagcgcgca gtcatgaaaa
     1321 ggatctggga gatgtttcag taggtcagtt gtcggttgtc agttgcaact gaccactgac
     1381 gactgaccac tgacagcacg aagtatgact agcaaaacaa taaataagat cgttctggct
     1441 tactcgggcg ggctcgacac gtcggtcatg ctgcactggc tgaaagagaa gtatcagtgc
     1501 gagatcgtct gctactgcgc cgatgttggt cagggcgctg agatggacgg tctcgaagag
     1561 aaggcgaagg cgaccggcgc gtcgaagttg tacatcgagg acctgcgaga agagttcgtc
     1621 cgcgattacg tgtggacatc cgtcaaagcg aacgccgttt atgaaggcgt gtacctgatg
     1681 ggcacttcgt tggctcgccc cgtgatcgcg aagcgacaga ttgagatcgc ccggctggaa
     1741 aatgccgatg ctgtcgctca cggcgcaacc ggcaagggaa acgatcaggt gcggttcgaa
     1801 ctcacttatt acgctttgca acctgatatc aaggttattg cgccctggcg cgagtgggag
     1861 tttggcggtc gcacagatct gattgcttac gccgaaagct atggaatccc ggtgacggca
     1921 acgatcgata aaccgtattc gaccgatgcg aacctgatgc acgtttccta tgaaggcggg
     1981 attcttgaag acccctgggc cgaaccgccc gagaacattt ttcagatgac ggtgtcgccc
     2041 gaacgtgcca aagatgaagc cgagtacatt gaaattggat ttgaaaaagg tgagccggtc
     2101 tcggtggatg gcgaacagtt ggatcccgtt tcgctgcttt caaagctgaa tgagatcggc
     2161 ggcgcgcacg gcataggccg cgtcgatctg gtcgagaatc gtttcgtagg catgaagtca
     2221 cgcggcgttt atgaaactcc gggcgtgacg atcttgcacg ccgcgcatcg cgctttggaa
     2281 tccatcacga tggatcgaga ggtgatgcac ttgcgcgatt cgttcggagt gaagt
//
LOCUS       DATDBY010000004         2648 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_199538, whole genome shotgun sequence.
ACCESSION   DATDBY010000004 DATDBY010000000
VERSION     DATDBY010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2648
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199538"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..969)
                     /locus_tag="VIT19_00090"
     CDS             complement(<1..969)
                     /locus_tag="VIT19_00090"
                     /inference="COORDINATES: protein motif:HMM:NF012693.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein
                     phosphatase"
                     /protein_id="HEY5837401.1"
                     /translation="MSTPTPANNVKVASISDRGLNQKRPLNEDSLLSDHERGIFAVAD
                     GVGGAEAGEVASQTAVDVLSEAFRHRIHDGDDVEDLMELAIQRANASIHQMANEHPRF
                     SMMATTIVALHVDGLRATFGHVGDSRLYRVRPNGELRRETEDHSIVEEEVRAGRMTPE
                     QAANHPSKNVISRALGAEPSVEVDMQTIEIEDGTSFLLCTDGITRHLSDKELRDLIVS
                     GQSIEAACEEMKRRCYERGAEDNLTAVIVQIGTPKYNAAVDADRTIDTKLPPELARTT
                     PDIAEPRVLLTPASRIAFPGPATETSTAPAAIAAEPAPATGGRAVRR"
     gene            complement(966..>2648)
                     /locus_tag="VIT19_00095"
     CDS             complement(966..>2648)
                     /locus_tag="VIT19_00095"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEY5837402.1"
                     /translation="MRNRLSSHIFVLLALIAVEVVGYFAIYRSGLIRGYETSWIGAAR
                     DLLLFFPLIVAAFWLSRTWRFKGSWVLYTTAIVLFSMGMLVQYRLYSDPEYGARNKAA
                     ARQEKTQTLRLRYINENYDANKRALMGLPPTPPANEEFAVKKANYTFFNALTSSYTWV
                     PVFALIGFGLAFAFCMSDRLLSWVQRNSFIIVLVTLLPLAIAIINSSAGKSLGNTTPW
                     EPAKVPFLLGFAGLLTARYKDLARTYWGIPRARDIIPLVVMAVIPFIPFFALKDFGQM
                     LIFSGAYATLYLVAVRRWPQLLIFVGSIVLVISILVIGALPRDMQEKFPLLPTLARPI
                     QTVLPSRIQQRFHLWLDGFNPPSPETSWWKPEFEEALAENPRMRELAAESETMRQSVN
                     NDVWFDKLAFQPAQAIFGIASGRTTGRGLGLGFPEVIPIADSDYVYAAIAEELGLIGG
                     ALVILAVIILVIAGIRTSIDARDMFTKLCAAGLTAFIGVQALVNIGGIVRALPMTGIT
                     LPFVSHGGFSLITSFAMLGMLMAFSHRNAVDARAMARVKHEPESSIKLEAVE"
BASE COUNT          574 a          754 c          803 g          517 t
ORIGIN      
        1 gcgacgcaca gcacgacctc ctgtcgcagg cgctggttcc gctgcgatcg cagccggagc
       61 agtcgaggtt tcagttgcgg ggccagggaa agcgatgcgc gacgccggtg tcagcagcac
      121 gcgcggctca gcgatgtccg gcgtcgtgcg ggcgagttcg ggcggcagct tagtgtcaat
      181 tgtgcgatcc gcatctaccg cggcgttgta tttgggcgtg ccgatctgga cgatgacggc
      241 cgtgagattg tcttcggcgc cgcgttcata acagcgccgt ttcatctctt cgcacgccgc
      301 ttcgatagac tggccgctca cgattaagtc gcgcagctct ttatcggaaa ggtgacgggt
      361 aatgccatcc gtgcagagca ggaacgaagt gccgtcttcg atctcgatcg tttgcatgtc
      421 cacttcgacc gaaggttcag cgccgagggc gcggctgatg acgttcttgc tggggtggtt
      481 cgctgcctgt tcaggcgtca tgcgtccggc gcgaacttct tcttcgacga tcgaatgatc
      541 ctcagtttcg cgacggagtt cgccgttcgg tcttacgcgg taaagacgcg aatcaccaac
      601 gtgtccgaag gtagctcgca agccgtcgac gtgcagcgcg acgatcgtgg tcgccatcat
      661 tgaaaaccgc ggatgctcgt tcgccatctg atggatcgac gcgttggcgc gttgaatcgc
      721 caattccatc aggtcctcga cgtcgtcgcc gtcgtggatc cggtgacgaa acgcttcgct
      781 gagaacatcg acggcggttt gggacgcgac ctcgccggcc tctgcgccgc cgacgccgtc
      841 ggctacggca aagatgccgc gttcatgatc gctgaggagt gaatcttcat tgagtggacg
      901 cttctgattc agtccacgat cgctgatgga tgcgactttc acgttgttgg caggggtagg
      961 ggtgctcact caacagcctc cagcttgatg ctgctctccg gttcgtgctt cacccgagcc
     1021 atcgcgcggg catcaaccgc gttgcgatgt gagaaggcca tcagcattcc gagcatcgcg
     1081 aaacttgtga tcagactaaa gccgccgtgg ctgacgaatg gaagagtgat tcccgtcatc
     1141 ggcagagcgc gcacgattcc gccgatattc accagtgcct gaacgccgat gaaggccgtg
     1201 agcccggcag cgcataactt ggtaaacata tcacgcgcat caatcgatgt gcgaatacct
     1261 gcgatgacta aaataatcac cgcgagaatg accagcgcgc cgccgattaa gcccaattcc
     1321 tcagcaattg cggcgtacac ataatccgaa tccgcaatgg gtatcacctc gggaaaacca
     1381 aggcctaagc cacggccggt ggtccggcct gaggcgatgc caaagattgc ctgcgccggc
     1441 tggaaagcca gcttgtcgaa ccagacgtcg ttgttgacgc tctgccgcat cgtctcgctt
     1501 tcggccgcga gctctcgcat gcgcggattc tcagcgagag cttcttcaaa ttcaggcttc
     1561 caccaggacg tctcaggcga aggcggattg aaaccgtcga gccagagatg gaaacgttgc
     1621 tgaatgcggg agggcaggac cgtttggatc ggacgggcca aagtcggcaa caggggaaac
     1681 ttttcctgca tgtcgcgcgg caacgccccg atgaccagga tcgagatcac cagcacgatc
     1741 gatccgacga agatcagtaa ctgcggccag cgacggactg cgaccagata aagcgtcgcg
     1801 tacgcgccgc tgaagatgag catctgcccg aaatctttga gcgcgaaaaa gggaatgaac
     1861 ggaatcaccg ccatcaccac caggggaatg atgtcgcgcg cgcggggaat gccccagtaa
     1921 gtgcgcgcca gatctttgta gcgcgccgtc agcaggcccg cgaagccaag caggaatgga
     1981 actttcgccg gctcccaggg cgtggtgttg ccgagcgact tacccgcgct cgagttgatg
     2041 atcgcgatgg ccagcggtaa caaagtgacc agaacaatga tgaaactgtt gcgctgaacc
     2101 cacgacagca aacggtcgct catgcagaaa gcaaatgcga gcccaaatcc gatcaacgcg
     2161 aacacaggga cccaggtgta acttgaggtc agcgcattga agaaagtgta gtttgctttc
     2221 ttgaccgcaa attcttcgtt tgccggcggc gtcggtggca gacccattag cgcgcgcttg
     2281 ttcgcgtcgt agttctcgtt gatgtaacgg aggcgcagcg tctgcgtttt ttcctgacgg
     2341 gccgcggctt tgttgcgcgc gccgtattcc gggtcactgt acaaacggta ctggaccagc
     2401 atgcccatcg agaaaagaac gatggccgtt gtgtacagca cccagctgcc tttgaatcgc
     2461 cacgtgcgtg agagccaaaa cgcagccacg atgagcggga agaacaaaag gagatcgcgg
     2521 gccgcaccga tccaggaggt ttcgtaaccg cgaatcaggc cggagcggta gatggcaaag
     2581 tagccgacaa cctcgaccgc gatcagcgcg agcagtacga aaatatgtga tgaaagacga
     2641 ttcctcat
//
LOCUS       DATDBY010000005         5894 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1226919, whole genome shotgun sequence.
ACCESSION   DATDBY010000005 DATDBY010000000
VERSION     DATDBY010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5894
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1226919"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VIT19_00100"
     CDS             complement(<1..208)
                     /locus_tag="VIT19_00100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837403.1"
                     /translation="MRISGRQLSLTILAAASLLAAAVIFAVFAFAPEVAGVYQPFLLT
                     SFIVALFMSLVAIAWLLRGILRPYN"
     gene            complement(215..1090)
                     /locus_tag="VIT19_00105"
     CDS             complement(215..1090)
                     /locus_tag="VIT19_00105"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEY5837404.1"
                     /translation="MSLLAIENVFDLPLPIVAAFTGILGAIIGSFLNVVIHRIPLEQS
                     IVFPNSACPSCRTPLRAYDNIPILSFLVLRGRCRSCRNPISIRYPIVEALTALLFVAV
                     ALRDGISYALPFDLAFVAALIALIFIDAEHMILPNVITYPGIIFAVLTRIALPYLVGP
                     EQFDDLPGLLARMPQLPVWSVSLIGAGIGALVGGGSLWLMGFLWEKLRGVEAMGLGDV
                     KMMFMVGAYLGWRLAVLTIFFGVFTGSFVGIAVMAKRGRNMQMMLPFGIFLGIGAIFS
                     LFFGHRIIEWYASQF"
     gene            complement(1495..2271)
                     /locus_tag="VIT19_00110"
     CDS             complement(1495..2271)
                     /locus_tag="VIT19_00110"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY5837405.1"
                     /translation="MKISACIIAFNEEENIQAACESVSWADEIVVVDSESTDATAENA
                     RACGARVLLNKWPGFAKQKQFATDAAAHDWVFSLDADERVSPELESSIAALRRKPETA
                     WAHGYRLARRTFYMGRWIRGGGWYPDFQLRLFNRRHGSWGDRLIHESFAMKSGSRVET
                     LAGDLLHYTVRDAAHHQQMIEERYAPLGAQQMFREGKRTSSLQAAVAGPSAFVRSYVL
                     KSGFRDGSAGLAIAKFAARHASLKHQLLRELQEQNQANSE"
     gene            complement(2351..4303)
                     /locus_tag="VIT19_00115"
     CDS             complement(2351..4303)
                     /locus_tag="VIT19_00115"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY5837406.1"
                     /translation="MKVSSKIATFALLLTFSVLATGSVVAQTPTPRPTPVNPAVQPPG
                     QDPLPTPAPNAPPGTQPISPQSPPGVLVQPTPFPTPVDPTLPEPREPNFPVQQAQPLM
                     PMPDLSRVGIISSNILSLSLTEAIRKALQNNNEIEIARDDVRYAETQLRGLYGVYDPT
                     FSITPQIIHNITPQQSSLGGGGASGTTTTTIFNFSPQLTKYFERGGGNYTLSFANSRQ
                     TTSNTFSSLSPFYSSNLSLQFNQPLFRNRSIDLNRRSIKIQKKFIQQTDSDFRQRTIQ
                     IISQVQAAYWNLVFALRNQQNQLESLNVARQNMRNIEAQIEAGAKAPLDRAQVQTDIS
                     ARESLLFTSTQNVSIAENSLKQLMLRDPAAPEWTAQITPTDTPVLDLSPVNLQLALDE
                     AHKNRPEIRRLNLQKEINAIDLDFYKNQTKPQVDLTGTIATTGLAGTPTGVPAGTVVP
                     LISGNPTANTSAFLLSQIQDIQTRAGFPVATSPTTVVSGPPANLVGGYGQDLRNLFSG
                     STRNLTVGVTISFPFKNRTAEANLAGARIQRDQLEASFRSQDQAIEMDVRNAAQAVDT
                     ARRRVLTSRMARESAEQQLAGEEKLYEVGRSTTFLLLSRQNELTFARTNELQAQTDYN
                     KALADLQRATGSTLRINNISVEPTKE"
     gene            4810..5814
                     /locus_tag="VIT19_00120"
                     /pseudo
     CDS             4810..5814
                     /locus_tag="VIT19_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012077405.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integron integrase"
BASE COUNT         1339 a         1650 c         1676 g         1229 t
ORIGIN      
        1 ggttgtaagg gcgaagaatt ccgcgcagca gccaggcgat cgcgaccaga ctcatgaaga
       61 gggcgacgat gaaactcgtc agcaggaatg gctgataaac gcccgcgacc tcaggagcga
      121 aagcgaagac cgcaaagatg acggccgcgg cgagcaggga tgccgccgcc agtatggtga
      181 gcgaaagttg ccgcccgcta attcgcatga gtcatcaaaa ctgcgacgcg taccattcga
      241 ttatgcgatg accgaagaac agactgaaaa tggcgccgat gccgagaaag attccaaacg
      301 gcagcatcat ctgcatgttt cgtccgcgtt tagccatcac cgcgatgccc acgaacgagc
      361 cggtgaaaac gccaaagaag atcgtgagca ccgcgaggcg ccatccgaga taggcgccga
      421 ccatgaacat catcttgacg tcgcccagcc ccatcgcctc aaccccgcgc agcttctccc
      481 aaagaaatcc catcagccaa agtgaaccgc caccaaccag cgcgccgatg cctgcgccaa
      541 tcagcgacac gctccacacc ggaagctgcg gcatccgcgc caacagcccc ggcaaatcat
      601 cgaactgttc aggcccaacc agataaggca gcgcaatccg cgtcagcacg gcgaagatga
      661 tcccgggata agtgatcacg ttcggcagaa tcatgtgctc ggcgtcgatg aagatcaggg
      721 cgatgagtgc cgccacgaaa gccagatcga aaggcagcgc atacgaaatg ccgtcacgca
      781 gggcgaccgc aacgaagagc agcgcggtca acgcctcgac gattggataa cggatcgaaa
      841 ttggattgcg gcacgagcga cagcggccgc gcagaactaa gaagctcagg atcggaatgt
      901 tgtcgtacgc gcgcaaaggc gtgcgacacg acgggcaggc tgaattcgga aagactatcg
      961 attgctcaag cggaatccga tgaatgacga cgttgagaaa gctgccgatg atggcgccga
     1021 gaattccggt gaacgcggcc acgattggca gcggaaggtc aaagacgttc tcgatcgcca
     1081 acaggctcat tcgtctgcga ttgtaacccg accgggaagc gctgcctact gaatttcttg
     1141 atctcctctt gggagagggc gataacatac cgactcatca tcaacggtca ttttcataga
     1201 ttgggtcagc ccgcagggct gaaagagagt agccgggggt tgagcgcgca cgcgataccc
     1261 ccggatcgag tgtccatgat tttgtgaccc tgaaaggtca cagaactcgt ctagacattt
     1321 ccgggggtct acgcttcgct gcgacccctg gctactttct tgcaacccct tcagggttgt
     1381 aaacaaataa ctcgctttcc caggttagcg cgctaaagcg cgcaaccctg ggctgaggtt
     1441 agtgaacgcc cttcggcgtt cggcgttact caactcccac agggggaggg gatatcactc
     1501 gctgttagct tgattttgtt cttgaagctc gcgaagaagc tgatgcttca gtgacgcatg
     1561 acgcgcggca aactttgcaa tcgcgagtcc cgctgagccg tcgcgaaagc cggacttcaa
     1621 gacgtagctg cgcacgaacg ccgacgggcc ggcaacggcg gcttgcagcg aagacgtgcg
     1681 cttgccttcg cggaacatct gctgcgcgcc gagcggggcg tagcgttctt caatcatctg
     1741 ctgatgatgc gctgcgtcgc gtaccgtgta gtgaagcaag tccccggcaa gcgtttcgac
     1801 tcgcgatccc gatttcattg cgaaggattc atgaatcaaa cggtcgcccc agcttccgtg
     1861 ccgccgatta aaaaggcgca attgaaaatc cgggtaccat ccaccgccgc gaatccagcg
     1921 gcccatgtag aacgtccgcc gcgcgagccg ataaccgtgt gcccaggccg tctcgggctt
     1981 gcggcgcaaa gctgcgattg atgattcgag ttccggcgag actcgctcat cagcatcaag
     2041 gctgaaaacc caatcgtgcg cggccgcgtc ggtcgcgaac tgcttctgct tcgcaaatcc
     2101 gggccatttg ttgaggagga ccctggcccc gcaggcgcgg gcgttttcgg ccgtcgcatc
     2161 ggtggattcc gaatcgacaa cgacaatctc gtccgcccat gaaaccgatt cacaggcggc
     2221 ttgaatgttt tcctcttcgt tgaaggcgat gatgcaggcg gagattttca ttgccaattg
     2281 ccgatttacg attgccgatt agtatacatt tcgctaatcg gcaatcgaca atcttcaatc
     2341 ggcaatgatg ttactccttg gtaggctcaa ccgaaatatt attgatgcgg agcgtcgacc
     2401 cggtcgcacg ctgaagatcc gcgagcgcct tgttgtagtc agtctgcgcc tggagttcgt
     2461 tggttcgcgc gaaagtcagt tcgttctgcc gcgagagcag caggaacgtg gtcgagcggc
     2521 cgacttcgta gagtttctct tcgccggcga gctgttgctc agcgctctct ctcgccattc
     2581 gtgaagtcag gacccgccgc cgcgccgtgt ccaccgcctg cgccgcgttg cgaacgtcca
     2641 tctcgattgc ctggtcctga gagcggaacg aagcttccaa ctggtcgcgt tgaatgcgcg
     2701 cgccggcgag attggcttcc gcagttcgat tcttgaacgg gaaggagatc gtcaccccaa
     2761 ccgtcaggtt gcgcgtgctg ccgctgaaca gattacggag atcctgtccg tagcccccca
     2821 ctaaattggc gggaggtccg ctcacaacag tcgtaggcga agtagccacc ggaaagcccg
     2881 ctcgagtttg aatatcctga atctggctca atagaaaagc gctcgtgttc gcagtcggat
     2941 tccctgaaat cagtgggacg accgttcccg ccggaacgcc ggtcggagtt ccagccaagc
     3001 cggtcgtggc aattgtaccg gttaaatcaa cctgcggctt cgtctggttc ttgtagaagt
     3061 cgaggtcaat ggcattaatt tctttctgca ggttcagccg ccgaatctcg ggccgattct
     3121 tgtgcgcttc gtcgagcgcg agttgcagat ttaccggcga cagatcgagc accggcgtgt
     3181 ccgtcggcgt aatctgcgcc gtccattcgg gcgcggccgg gtcgcgcagc atcaactgct
     3241 tcaaagagtt ctcagcgata gaaacgtttt gcgtcgaggt gaaaagtagc gactcgcgcg
     3301 ccgaaatgtc cgtctgtacc tgcgcgcgat cgagcggagc tttcgccccg gcttcaatct
     3361 gcgcttcaat gttgcgcatg ttctggcgcg cgacgttcaa actctcgagc tggttctgct
     3421 gattgcgcag cgcaaacacc aggttccagt aagcggcctg tacctgcgaa ataatctgaa
     3481 tcgtccgctg ccgaaaatcc gagtcggttt gctgaatgaa cttcttttga atcttgatcg
     3541 agcggcgatt gagatcgatg cttcgattcc gaaacagcgg ctgattgaat tgcagcgaca
     3601 ggttcgaaga gtagaacgga ctcagcgagc tgaatgtatt acttgtcgtc tgacgcgaat
     3661 tggcgaagct cagagtgtag ttgccgccgc ctcgctcgaa atacttagtg agctgcggac
     3721 tgaagttgaa aatcgtcgtg gtcgtcgtac ccgacgcgcc gccgcctccc aggctgcttt
     3781 gctgcggcgt gatgttgtga attatctgtg gcgtgatgct gaaggtcgga tcgtacacgc
     3841 cgtagagtcc gcgcagttgc gtctcagcat agcgaacatc gtcgcgcgcg atttcgatct
     3901 cgttgttgtt ctggagcgcc ttgcgaatcg cctcggttag cgacaggctc aggatgttgc
     3961 tgctgatgat gcctacgcgc gacaggtccg gcatcggcat caacggctgc gcctgctgca
     4021 ccgggaagtt cggctcgcgg ggctccggca aagtcggatc gacgggcgtg ggaaacggtg
     4081 tcggctgtac aagaactccc ggcggcgact gtggcgagat tggctgcgtt cccggcggcg
     4141 cattcggcgc gggcgtcggc aaaggatcct gcccgggcgg ttggacggct gggttaaccg
     4201 gcgtcggtcg cggggtcggc gtttgcgcga ccacgctgcc cgtagccaga accgaaaatg
     4261 tcagcagcag ggcaaacgtc gcgatctttg aagagacttt catttcgggt gctcctaaaa
     4321 acttaaagcg taaactaact tgaaacctga agctttgagc ctgaaacggc cgtggccgta
     4381 cgcgattcaa acacagatcg gcttcaaaag gtcaaatttc tactacgtta ccaattaatc
     4441 atcggtttca agaagctgag gaggtcgaga gcaagatcgg ctcccaatcc tgagtttgat
     4501 gacattgctt attgcgagct cggttgaacc ttcggcattc ccctgcgaac acgaagaagc
     4561 ctcatgtaaa actcggccga tacaaataaa ggatgctgcg tacagccgca agacctccac
     4621 gtatggatgc aaaggtgccg cgtcacccgc aaaacctcga cgtacacgtg caaagacgcc
     4681 acaacgtcgc aaaaacctca ccatctcgcg cacattcttt gaaaacaggc gcaaaaatcg
     4741 cggaatcgtg ctctagtccc gcggctatca gccaaccgcc ccttcaatgt aaaaaggttt
     4801 taccacggta tgcgggaata taatcgccgg attgtggcgc aatcagctca cactttcgaa
     4861 aagcctcggc tgttcgatga agttcgtaat gtcgcacgca tgcgacacct cagcctgcgg
     4921 actgaacaag cgtacacaaa ctggatccga cgctatattc tctttcatcg caagcgccat
     4981 ccgcgggaga tgcaggaaac ggaaatccgc gagtttatct cccatctcgc cgtcaacaaa
     5041 ggcatctcag cctcaactca gaccgtagct ctgagcgcct tgttgtttct ttaccgcgat
     5101 gtcctcaagc ttggaacttc cttacgtgtc caacattgag cgcgctcaaa agccgaagcg
     5161 acttccagtt gtgtttaccc gtgatgaagt gaatcgcctt ctggcgcacc tggaaggtct
     5221 tcattggttg ctagctggcc tactctatgg gtcaggcttg cggttaatgg aatgtcttcg
     5281 tctccgtgta aaggacatcg acttcacata cggacaagtg acagtacgtg atggaaaagg
     5341 cgagagaccg gatcactatg cttccggtaa aactgaagca accgctgatg cgacatcttc
     5401 agaaggtaaa aatctcccac gatgaagatc ttgcggccgg atttggcgaa gtgtttttgc
     5461 cgtacgcgct tgctcggaaa tatccaaacg cgcccaagca gtggggctgg caatatgttt
     5521 ttccgtcagc cactcgatca gttgacccgc gcagcggcaa agaaggacgg caccatctct
     5581 ctgactcagc tgttcaacag gcggtgaagg gggcggtcca acgcgctggg atcgtgaaaa
     5641 atgccagttg tcacaccttc cgccacagtt ttgccacgca cctccttgag agcggttacg
     5701 acatccggac agttcaggaa ttactgggac acaaagacgt tcggactacc atggatttac
     5761 acgcatgtgc ttaaccgcgg agggcgcggc gttcagagtc caatggacta ttgagactgg
     5821 cagcagagct tggcggtgcg gataagacgc gctataaggg gcttatacgg aatcgttccg
     5881 tataatactt agtt
//
LOCUS       DATDBY010000006         2391 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2029453, whole genome shotgun sequence.
ACCESSION   DATDBY010000006 DATDBY010000000
VERSION     DATDBY010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2029453"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..975)
                     /locus_tag="VIT19_00125"
     CDS             complement(<1..975)
                     /locus_tag="VIT19_00125"
                     /inference="COORDINATES: protein motif:HMM:NF037667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837407.1"
                     /translation="MTIVPGFLRSQRATRIFFVAIVLAGCATLVPAQRRERVVTNWRP
                     LHYDVSLSFNDAMTEISSARTEVTLRVLKPRVTKIDFDFGEMPITSVTVAGKPARYQR
                     TSNTLDVMLPAAARNGAEFKIAISYHGRPKDGLILANDGDGKPSATGDNWPNRVHHWI
                     PALDHPSAKAAVSFNVSAPTHYQVTANGKLGTVTRSGAISFWRFQEGKAIPPYCMIVA
                     VNQGAIIDSPDKSVTNLFYNVPHRDAEYAPKGFSPAAPSLAFFSQTIAPYPYEKLALI
                     VGATQFGGMENSSAIVFASTMFNLRPNEKMSARFDIPQRLESLVAHEIA"
     gene            complement(984..1340)
                     /locus_tag="VIT19_00130"
     CDS             complement(984..1340)
                     /locus_tag="VIT19_00130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837408.1"
                     /translation="MDAPFAPGDDLIFQLESGFGLLRVIAVEEHETVRVWHLMAYEEF
                     FADPESAEAALTSPESLQVRRAHMALTDRAFERTPAAKLGNRPVTENEQAVYQNWRDS
                     DGRVSDRSALLMLGIR"
     gene            1435..1989
                     /locus_tag="VIT19_00135"
     CDS             1435..1989
                     /locus_tag="VIT19_00135"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEY5837409.1"
                     /translation="MSQFDPKKNYYEVLGADDDASRRDIERLYRRLAHRRHPDRGGSE
                     DEMKTLNEAYAVLHDDAMRKDYDKQRTRPVAAAPDINTAAPARDVGVYGQALNALACL
                     AAGLMLLLLVRFNGLWFLWPLGILAVGVMLFGVFIAHAAVRNARESLRGSHPVRRLRA
                     VQELAFWTIVVGAVYGLYLILTAV"
     gene            2006..2380
                     /locus_tag="VIT19_00140"
     CDS             2006..2380
                     /locus_tag="VIT19_00140"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5837410.1"
                     /translation="MVTGLDALFLEVNNLEESLSFYRDQLGFVLESHNADAEPPMATV
                     RAGALKINLVQQLETMLKRGRGVHFVLGVEDVDALFAKIPALDNRVLSPRDEGWGGRF
                     ISVLDPDNYRFVFVEWNANQPK"
BASE COUNT          506 a          638 c          706 g          541 t
ORIGIN      
        1 cgcgatttcg tgggcgacga ggctttcgag acgctgcggg atgtcgaaac gcgcgctcat
       61 cttttcgttt ggtcgcagat tgaacatcgt gctggcgaag acgatcgcgc tggagttttc
      121 catcccgcca aactgagtcg caccaacaat cagcgccagc ttctcgtaag gatacggcgc
      181 gatggtttga ctgaagaacg cgagcgatgg cgccgcgggc gagaatcctt tcggcgcgta
      241 ctcggcatct cgatgcggca cgttgtaaaa gaggttcgtg acactcttgt ccggcgagtc
      301 gatgatggcg ccctggttca cggccacaat catgcagtac gggggaatgg cttttccttc
      361 ttgaaacctc caaaaggaaa tagcaccgct ccgcgtgaca gtcccgagct ttccatttgc
      421 ggttacctgg taatgtgtgg gcgccgacac gttgaacgag acggcggcct tcgccgaagg
      481 atgatccagc gccggtatcc aatgatggac acggttgggc cagttgtctc cggtagcgga
      541 aggtttgccg tcgccatcat tcgccaaaat cagcccgtcc ttcggccggc cgtgatagct
      601 aatcgcaatt ttaaattcag cgccgttccg cgcggcggca ggcagcataa cgtccagcgt
      661 gtttgacgtc ctttggtaac gcgccggctt gccggctact gtgacggaag tgattggcat
      721 ctcgccgaaa tcaaaatcta ttttcgtgac gcgtggcttc agcacgcgca gcgtgacttc
      781 tgtcctggcc gacgaaatct cggtcattgc gtcgttgaaa gacagagaga cgtcgtaatg
      841 aagcgggcgc cagttggtga ccacgcgttc gcggcgctgc gccggaacaa gtgtggcgca
      901 gccggccaga actatcgcta caaagaaaat gcgcgtggcg cgctgtgacc gcagaaagcc
      961 tgggacgatt gtcatgctgt ttctcaacgt atgccgagca ttaataaggc tgaacgatcg
     1021 gagacgcgtc cgtcgctgtc gcgccagttt tgataaacgg cttgttcatt ctccgtgacc
     1081 ggtcgattgc cgagctttgc cgctggcgtg cgctcgaacg cgcgatcagt caacgccata
     1141 tgtgctcggc gcacttgaag cgactccgga ctcgtcaaag cagcttctgc gctttccgga
     1201 tcggcgaaga attcttcata agccatcaaa tgccacacgc gaacggtctc gtgctcttcc
     1261 acggcaatga ctcgcaataa tccgaagcca ctctcgagct gaaagatcaa atcatcgcca
     1321 ggcgcaaacg gtgcgtccat ttaagtctcc tgttgctcag attaacagag agccattgtc
     1381 agccgtaagt gaattcgttg ccaaacgtgg aaatgcgaaa ctacaatcca gccgttgagc
     1441 caattcgatc cgaagaagaa ttattacgaa gttttaggcg cggacgatga cgcatcgcgc
     1501 cgcgacatcg agcgtttgta tcgaaggctg gcgcacagac gacatccgga tcgcggaggc
     1561 tcagaagacg aaatgaaaac gcttaacgaa gcctacgctg tgctgcacga cgacgcgatg
     1621 cgaaaggact atgacaaaca gagaacgcga ccagtcgcgg cggcgccgga catcaacacg
     1681 gcagcgcccg cacgagatgt tggcgtgtat ggacaggcgt tgaatgcgct ggcgtgtttg
     1741 gcggcgggcc tcatgttgtt gctgttggtt cgtttcaatg gactctggtt tctgtggccg
     1801 ctgggaatcc tcgcggtcgg cgttatgttg ttcggcgtgt ttatcgcgca cgcggcggtg
     1861 cggaacgcgc gcgaatcatt gcgcggctcg catcctgtcc gccgccttcg cgcggtacag
     1921 gaactcgcgt tctggacgat cgtggtgggc gcagtctatg gcctttactt gattctcact
     1981 gccgtgtgac ggacactccg caacaatggt gacaggtctt gatgcgctgt tcctggaagt
     2041 aaacaacctt gaagagtctc tgtcttttta tcgagaccaa cttggtttcg ttttggagtc
     2101 gcacaacgct gacgctgagc cgcccatggc caccgtgcgc gcgggcgctt tgaaaatcaa
     2161 tttagtccag cagcttgaga cgatgttgaa acgcggccgc ggcgtgcact ttgtgttggg
     2221 tgtggaggac gttgatgcgc ttttcgcaaa aatcccagcc ctcgataatc gtgttctgtc
     2281 accacgcgat gaaggctggg gtggcaggtt tatcagcgtg ctcgatcccg acaattatcg
     2341 atttgtgttt gttgaatgga atgccaatca accgaagtga ggtaatgaga t
//
LOCUS       DATDBY010000007         2140 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1425832, whole genome shotgun sequence.
ACCESSION   DATDBY010000007 DATDBY010000000
VERSION     DATDBY010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1425832"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..1396
                     /locus_tag="VIT19_00145"
     CDS             137..1396
                     /locus_tag="VIT19_00145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837411.1"
                     /translation="MTKYIIISAILLASGMSATAQTITVSPSETTVYSQGATSVLLTF
                     GNLGGRRPTESTWCGALIPAAPDIGMKCNPTVIFGRLPVRYNQSRLSGTNAYTDIMSV
                     TPSVARRAYLDATRGSTATFFYVRRFVLPSGGPDEYVPVTLRLGGNGAAVPFSITNVR
                     LLWDGGNKTVPFVKSGEALPRITAEIFYTGSGRLIGRWEIVKPGETAPTQRDLLPEAS
                     LPVEERGTQRRFTQVKRFNVFLPPLGRTTIPGPENQRIEKTVDGMYLLLLRIEAVTEG
                     VGRSDLQAVNAGQGTLNSGGASGFAMPVLRYYVGTGGAQVDEFNAIDYQLAPADLAEF
                     GASQQVVFTWPAVSQATYYRLIIEDATGTEVLSAVLLRDTHSYRAPSWLLSQTNTNQL
                     RWRVTAFDANRVKLTETVTRTLRRVAE"
     gene            complement(1481..>2140)
                     /locus_tag="VIT19_00150"
     CDS             complement(1481..>2140)
                     /locus_tag="VIT19_00150"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5837412.1"
                     /translation="GALDVQPDVEINQHGVRFLVSPLGSQKTGAFLDQRENYLAAKRV
                     ARGRALDCFTFNGGFALHIAKECDSVLGIDISGDAISGARHNAELNEISNVEFRAANV
                     FDALREFEVAGEKFDTIILDPPAFAKNRASVKSAARGYKEINLRALKLLNPGGVLVTC
                     TCSYHMPEEMFLEVLAAATLDARRRLQIVEVRGQSSDHPVLMGVPETHYLKCVIARVV
                     D"
BASE COUNT          465 a          622 c          596 g          457 t
ORIGIN      
        1 aggtgcaaac gcaactattt attcgctacg ccgatcgcta tgcgcggtcg cacgatctcg
       61 tttttcaaac ttcgaatcta acgcgcgtca aaatagtaaa tgccggagtg aacattacgt
      121 tcttctagga tccatcatga ccaaatacat cattatttcg gcgattctac tggcgagcgg
      181 gatgtctgca acggcacaga ccatcaccgt gtctcccagc gaaaccaccg tctattcgca
      241 aggcgcgacg agcgttcttc tcactttcgg aaacctgggc gggcgacgcc cgaccgaatc
      301 gacctggtgt ggcgccttaa ttcctgccgc gccggacatc ggaatgaaat gcaatccgac
      361 cgtaatcttc ggacgattgc cggtgcgcta caaccaatcc cgtctgagcg gaaccaacgc
      421 ctataccgat attatgtccg taacgccatc ggtggcgcgg cgggcttatc tggacgcgac
      481 gaggggatca accgcaactt tcttttatgt gcggcgattt gtcttgcctt ccggaggtcc
      541 ggatgagtat gtgccggtaa ctctgcgact gggtggtaac ggcgcggccg tccccttctc
      601 gatcacgaac gtacgtttat tgtgggacgg gggtaacaag accgtgccct tcgtgaagtc
      661 aggcgaggca ctgccgcgca ttaccgcaga aatcttctat accgggtccg ggcgattgat
      721 aggacgttgg gaaattgtga aaccaggcga aactgcccct acgcagcgtg atttgttgcc
      781 ggaagcctct ctgccggttg aagagcgcgg tacccagcga cggtttacgc aggtaaagcg
      841 cttcaatgtt ttcctgccac cgcttggccg gacaacgatt cccgggcccg aaaatcaacg
      901 catagagaaa accgtcgacg ggatgtacct gttactcctt cgaatcgaag ctgtgaccga
      961 gggcgtaggt cgatccgatc tgcaggctgt aaacgcggga caaggaacac tcaacagcgg
     1021 cggcgcctcg ggctttgcca tgcccgtgct gcgatactat gtcggcaccg gcggcgcgca
     1081 ggtcgacgaa ttcaacgcca tcgattatca acttgcgccg gctgacctgg cagagtttgg
     1141 agcctcgcag caggtcgtct tcacctggcc cgcggtctcg caagcaacgt attaccggct
     1201 tattatcgaa gacgccacgg ggacggaggt tctttccgcc gtcctgctgc gcgacacgca
     1261 cagttatcgc gctccttcat ggctgttgtc gcaaactaat accaaccaac ttcgctggcg
     1321 agtcaccgct ttcgatgcga acagagtgaa actgactgaa accgtgacga gaacgctgcg
     1381 gcgtgtggct gaatgaactc ctctttttcc gaggggagca cccgcacagt caggcgatca
     1441 atgcgttact taaaactctg aaaagccgac ttattgctga ctaatcgacg actcgcgcga
     1501 tcacgcattt caagtaatgc gtctccggca ctcccataag caccgggtga tcgcttgatt
     1561 gaccgcgcac ttcgacaatc tgcaggcggc ggcgcgcgtc cagcgtcgcc gcggccaaca
     1621 cttccagaaa catttcctcg ggcatgtgat aggaacaggt gcaggtcacc agcacgccgc
     1681 cgggatttag gagtttcaag gcgcggagat tgatttcctt gtagccgcgc gcggccgact
     1741 taacgctcgc gcggtttttc gcaaatgccg gcgggtcgag gatgatcgtg tcgaactttt
     1801 cgcccgcgac ttcgaactct cgtaacgcat cgaagacgtt ggcggcgcga aactcaacgt
     1861 tcgaaatttc gttaagctcc gcattgtgac gcgcgccact gattgcgtcc ccggaaatgt
     1921 cgattcccag aacactgtcg cattccttcg cgatgtgcag cgcgaacccg ccgttaaaag
     1981 tgaagcagtc gagggcgcga ccgcgcgcga cgcgctttgc cgccagataa ttctcacgct
     2041 gatcgagaaa cgccccggtt ttttgcgagc cgagcggcga aacaagaaag cgcacgccgt
     2101 gttggttgat ttcgacgtca ggctgaacat ccaaagcgcc
//
LOCUS       DATDBY010000008         3922 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2850957, whole genome shotgun sequence.
ACCESSION   DATDBY010000008 DATDBY010000000
VERSION     DATDBY010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3922
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2850957"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..906
                     /locus_tag="VIT19_00155"
     CDS             <1..906
                     /locus_tag="VIT19_00155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837413.1"
                     /translation="SEDRVLIEQLRGDAQQLAALPLTVRGKVVAVLYLDSAWPHQDAI
                     RLDALEVLTQVAGMAVELASPRATRSAPAVTPAVEAVQPAEAAPTAPHETAQAEPEQP
                     EEPEQPEEPSYIPQIETQLPQVEAQAPAASVEEPSASVVETAEVETPAVEAVPEPEIP
                     REESIAPPPPPETPVETPVFTEEYSTPLGRSRRYGTPEAELPVQVNDEERRLHHDARR
                     FARLLVSEIKLYNEQKVSEGRNQSDIYDRLREDIDRSRQMYDKRVAPPVAARHDYFHQ
                     ELVNTLAEGDPAKLGGSYPGAAVAV"
     gene            1010..1474
                     /locus_tag="VIT19_00160"
     CDS             1010..1474
                     /locus_tag="VIT19_00160"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEY5837414.1"
                     /translation="MPKEGSDAPDFTLPDGAGKPWRLSDYRGKVVVLLFYPGDETPIC
                     TRQMCSVRDRWDDYVATGAEVVGISTDSVESHRKFSEHHKLPLRLLSDPNRKVADMYG
                     ANSLVPGKVARSVFVIDGEGAIRHRDVRPLGLFRPKDDDVLQAIRACQTRER"
     gene            1565..1846
                     /locus_tag="VIT19_00165"
     CDS             1565..1846
                     /locus_tag="VIT19_00165"
                     /inference="COORDINATES: protein motif:HMM:NF003817.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HEY5837415.1"
                     /translation="MPDEIKCARCGQKRSPLGYAPLPTELGQKVAKEVCQACWAEWLQ
                     NQTRIINHYGLDLTNPEAQGFLMDNMKGFFYGENELAQIDTSKEGSIKW"
     gene            2034..>3922
                     /locus_tag="VIT19_00170"
     CDS             2034..>3922
                     /locus_tag="VIT19_00170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837416.1"
                     /translation="MLKRIVSIRVFLPLLVALVAATTASAQTKLLRFPDIHGDRVAFT
                     YAGDLWTAPANGGSAIRLTAHPGIEVFAKFSPDGKWIAFTGQYDGDEQVYVMPASGGV
                     PRQLTFYPAKGPFTPRWGWDNQVYGWTRDGKRIVFKSQRDSWSLPIARLYTVSAEGGA
                     AEALPMPQAGSGDYSPDGTRMVYSPQSRDFRPEKRYGGGQANRLYIYDLKTHATKPIA
                     DGPRASRDPMWIGDTIYYDSDRDGHFNLYAYNTGNGKTTQVTQSKLWDVRWPSADDQN
                     RIVYEMNGELQVLDTRSGKAAPISITVPDDGLARRPSRVPAAGNIESYELSPKGERAL
                     MSARGDIFTVPIEKGPTRNLTHSSGAHDKWPSWSPDGSQIAFISDLSGEEEVYVIAQD
                     GLKPPQQITTGGKAMRYQPEWSADGKRLAFSDKDGKLYVVTLADKKVTEIIDAPRGQL
                     RDYTWSPTGNYLAFSMATSGNGFSQLHIWNGADNKVTRVSSQMFNATSPAWDSSGSYL
                     YFLSDHEFAPQISQVEFNFATNRTSYIYAMALRKDVKHPFPPESDEVAVTKAREEGAA
                     PAEPKKEGEAEAPKADAPKPAAPPPPRAMTIDFDGIMNRVARVPIGADNFGGLGTKPG
                     FLVYAT"
BASE COUNT          866 a         1161 c         1150 g          745 t
ORIGIN      
        1 tccgaagacc gcgttctgat cgaacaactt cgtggcgatg cgcaacagct cgccgcgttg
       61 ccgctaacgg ttcgcggaaa agtcgtcgcc gtcctttatc ttgattcggc gtggcctcat
      121 caagacgcta tccggttgga cgcgctcgag gtattaacgc aggttgccgg catggccgtt
      181 gagttggctt cgccgcgggc tacccgttcc gccccagccg tcacacccgc agtcgaagct
      241 gtgcaaccag ccgaagctgc acccaccgcg cctcacgaaa cggcccaggc cgaacctgag
      301 cagccggaag aacctgagca gccggaagaa ccttcgtaca ttccacagat tgaaacgcaa
      361 ctgccgcaag tcgaagctca agcaccggca gcgtcggtcg aagaaccatc cgcatcagtc
      421 gttgagaccg cggaagttga aacgcctgcg gttgaagctg tgccggaacc cgaaatcccg
      481 cgtgaggaat caatcgcgcc gccaccgccg cccgagacac cagtcgaaac tccggtgttc
      541 accgaggaat acagcacgcc gttggggcgc tcgcgccgtt acggcacgcc cgaggccgag
      601 ctgccggttc aagtcaacga tgaagagcgc cgtctgcacc acgatgcgcg ccgcttcgcg
      661 cgtctgctgg tttccgagat caagctttac aacgaacaga aggtcagcga ggggcgtaac
      721 cagagcgaca tctacgatcg acttcgcgaa gacatcgatc gctcgcgtca aatgtacgac
      781 aagcgggtcg cgccgccggt cgcggctcgt cacgactatt tccatcagga attggtaaat
      841 acgctcgcgg aaggcgatcc ggcgaaactg ggaggcagtt acccgggtgc ggcggtagcg
      901 gtttagtcgt aatcacattt gtgagaaagg gcacgggacg accgtgccct ttttattgtt
      961 ggtcgagccc gtttgccaca gcctgcattt ggcccttaaa gtcagacgca tgcccaaaga
     1021 aggatcggac gcgcccgact tcactctgcc cgacggagca gggaagccct ggcgcctttc
     1081 agactatcgc ggcaaagtcg tcgtgctgct tttctatccc ggcgacgaaa ctccgatctg
     1141 tacgcgccag atgtgttccg tgcgcgatcg ttgggacgac tacgtggcga ccggcgcgga
     1201 agtcgtcggc atctccactg acagcgtcga atcccaccgg aagttctcag aacatcacaa
     1261 attgcctctg cggcttcttt ctgatcccaa tcgaaaagta gcggacatgt acggtgcgaa
     1321 ctcgctcgtg ccgggcaaag tcgcacgctc ggttttcgtg atcgatgggg agggcgcgat
     1381 tcgtcatcgc gacgtgcggc cgttgggatt gtttcggcca aaggatgacg atgtgctgca
     1441 agcgattcgc gcgtgtcaga cccgggagcg gtagctaccg gatcggcaat tcaagttgag
     1501 atttgatccg gtcgctaccg ttcccggttc tgacacggct ataatccgtc cgaggtaatc
     1561 atccatgcca gacgaaatca aatgcgcccg ctgtgggcag aaacgtagtc cgctcgggta
     1621 tgcgccactc ccgactgaac ttggtcagaa agtcgccaaa gaagtttgcc aggcatgttg
     1681 ggctgagtgg ttacagaatc agacccgcat catcaaccat tacggtttgg atctgacgaa
     1741 ccctgaagcg caaggcttcc tgatggataa catgaaaggc ttcttctacg gcgagaacga
     1801 gctggcgcag atcgacacct cgaaagaagg ctcgatcaag tggtgatttt acaatcattt
     1861 tgaaaccgaa cccgcccgcc aggcgtaaaa aagcctgagc atcctgtcgc gtttttgaaa
     1921 taacaatcaa cgaaacgatg gtcagagcac cgactttagt cgggcagttc gtcagttcac
     1981 cgaaaggccc agctaaagct ggcactctaa acaccgctta aaggagagag cccttgctta
     2041 aaagaattgt atctatccgc gtcttccttc cccttctcgt cgccttagtc gcagcgacaa
     2101 ccgcgtccgc acagacaaag ctgctgcgtt tcccggacat tcacggcgac cgcgtcgctt
     2161 tcacttacgc cggcgacctt tggaccgcgc ccgccaacgg cggcagcgcg attcggctga
     2221 cggcgcatcc cggcattgaa gtgttcgcga agttctcgcc ggacggaaag tggatcgctt
     2281 tcaccggaca gtacgatggg gacgagcagg tgtacgtgat gcccgcgagc ggcggcgtgc
     2341 cgcgccagct cactttttat ccggccaagg gcccttttac gccccgctgg ggttgggaca
     2401 atcaggttta cggctggaca cgcgacggca agcgcatcgt tttcaagtcg cagcgcgatt
     2461 catggtcgct cccgattgcc aggctctaca cggtttcagc cgagggtggc gcggcggaag
     2521 ccctgccgat gccgcaagcg ggttccggcg attactcgcc tgatggaacg cgcatggttt
     2581 actcgccgca gtcgcgcgac tttcgtccag agaagcgtta cggcggcggc caggcgaacc
     2641 gtctctacat ctacgatttg aagacgcatg ccacaaagcc gatcgcagat ggcccgcgcg
     2701 cgtcacgcga tccgatgtgg attggcgaca cgatctacta cgactcggat cgcgacggcc
     2761 atttcaacct ctacgcctac aacaccggca atggaaagac gacgcaggtg acgcagagca
     2821 aactttggga cgtgcgctgg cccagcgccg atgatcagaa tcgcatcgtc tacgagatga
     2881 acggtgagct gcaagtgctc gacacgcgca gcggaaaagc tgccccaatt tcgatcaccg
     2941 ttcctgatga tggcttagca cgccggccaa gtcgcgtccc agccgcaggc aatattgaat
     3001 cttacgaact gagcccgaaa ggcgaacgtg cgttgatgtc ggcgcggggt gacattttca
     3061 cggtgccgat tgagaaaggc ccgacgcgca atctgacgca ttcatcgggc gcgcacgaca
     3121 agtggccgag ctggtctcct gatggatcgc agatagcctt catttctgac ttgagtggcg
     3181 aagaagaggt ttacgtcatc gcccaggatg gtttgaaacc gccacagcag atcacgaccg
     3241 gcggcaaagc gatgcgttat caaccggagt ggtcggcgga cggaaagcgt ctcgcgttca
     3301 gcgacaaaga cggcaagctt tacgttgtca cgctcgccga taagaaggtg acggagatca
     3361 tcgacgctcc gcgcggtcag cttcgcgatt acacctggtc accaaccggt aactacctcg
     3421 cgttcagcat ggcgacaagc ggtaatggtt tttcgcagct tcacatttgg aacggcgccg
     3481 acaacaaggt cacgcgcgtc agcagccaga tgttcaacgc caccagtccc gcgtgggaca
     3541 gctcgggcag ctatctgtat ttcctgagcg accacgaatt cgcgccgcag atttcgcagg
     3601 ttgaattcaa cttcgcgacg aaccgcacga gctacattta cgcgatggct ttgcgcaaag
     3661 acgtgaagca tccattcccg ccggagagcg atgaagttgc ggtgacgaag gcgcgcgaag
     3721 aaggcgccgc gccggctgag ccgaagaaag aaggcgaagc tgaagccccg aaagccgatg
     3781 cgccgaaacc cgccgcgccg ccgccgccga gagcaatgac gatcgatttc gacgggatca
     3841 tgaatcgcgt ggcgcgcgtg ccgattggcg ctgacaactt tggcggactc gggactaagc
     3901 cgggatttct ggtttacgcc ac
//
LOCUS       DATDBY010000009         2243 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2434877, whole genome shotgun sequence.
ACCESSION   DATDBY010000009 DATDBY010000000
VERSION     DATDBY010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2434877"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /locus_tag="VIT19_00175"
     CDS             complement(<1..681)
                     /locus_tag="VIT19_00175"
                     /inference="COORDINATES: protein motif:HMM:NF014665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HEY5837417.1"
                     /translation="MVFVLTAKAKDPRPKTKPKMSKGVHRFALFVAGATFFLIIAGAN
                     VTSRDAGLATSDWPLSNGQFFPTMVGNLYWEHGHRMIAASVGFLTFVLAVYLQFRERR
                     SWVKRLGWAALGLVIVQGLLGGLTVKMNLPLAVSSAHGTLAQLFFLTTVSLAVFTSRS
                     WIEAPASVHESSGGISLRSLCVASLVLILAQLVLGATLRHSASWDQWLPTSLLIAHIT
                     GAIIVTLSL"
     gene            complement(700..1572)
                     /locus_tag="VIT19_00180"
     CDS             complement(700..1572)
                     /locus_tag="VIT19_00180"
                     /inference="COORDINATES: protein motif:HMM:NF026037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEY5837418.1"
                     /translation="MFTKRARLWLGLTAALAVLSLGSSCSKTDTTTDSGPETGSAYTS
                     KGDEGTITGTVAYAGAAPEAKKIDTSADPQCSAKSANLTSEEWAVKDGKLANTFVYIK
                     DGTLADGKKVGDFAWAAPSAPATLDQDGCHYKPHVFGVVTKQSISIKNSDPTTHNVHF
                     TPKNNPDWNQSQPNGAGPLTHKLNVAEAMVPVKCNQHPWMKAYVGVMKHPFFAVSAEN
                     GSFTIANVPPGTYTVVAWHEGPGAGTEKTMQVTVPAKGAGTADFSFGASAALRGQPSS
                     LPMLPAVEFPMLHR"
     gene            complement(1839..>2243)
                     /locus_tag="VIT19_00185"
     CDS             complement(1839..>2243)
                     /locus_tag="VIT19_00185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837419.1"
                     /translation="PCLKCHITGDPGHDATAIAPNFLLASERLKPDWTFRWLLDPAQI
                     SPGTAMPTGLFKKEGERWVVNLPNPPAAVTNYHGDHAKLMVRYMFLMTPDEQRRLLSA
                     SPSTPAPAAQPSATSGHHVNSSRRLMSHRLRR"
BASE COUNT          491 a          682 c          609 g          461 t
ORIGIN      
        1 aagtgaaagc gtaacgataa tcgctcccgt gatgtgcgca atgagaaggc tggtcggcag
       61 ccactggtcc caactagccg aatgccgcaa cgtggcgccc agcaccagtt gcgcgagaat
      121 caaaaccagc gatgcgacgc acaacgagcg caacgaaatg ccgccgctcg actcgtgcac
      181 gctcgccggc gcctcgatcc agcttcgcga tgtgaacacc gccaaactta ccgtggtgag
      241 aaagaacaat tgcgccagcg tcccgtgcgc ggacgaaacg gcgagcggca gattcatctt
      301 gacggttaat ccgcccagca atccctgcac aatcaccaac ccaagagccg cccaccccag
      361 acgcttgacc catgaacgtc gctcgcggaa ttgcagatag acagcgagga caaatgtcag
      421 gaagccgacg ctcgctgcga tcatccgatg accgtgttcc cagtacaggt taccaaccat
      481 cgtgggaaag aattgcccgt tcgacagcgg ccagtctgag gtcgcaagtc cggcatcacg
      541 gctggtgaca ttcgcgcccg cgatgatgag aaagaacgtt gcccccgcca cgaatagcgc
      601 gaaccgatga acccctttgg acattttcgg tttggtcttt ggccttgggt ctttggcctt
      661 tgctgttaag acaaagacca aagcccaaag ttctaagacc tatctatgca gcatcggaaa
      721 ctcgaccgcc ggtagcatcg gcaatgagct cggctgtcca cgcagggctg cgctggcgcc
      781 gaaactgaaa tcggccgtgc cggcgccctt tgccggaaca gtcacttgca tagtcttctc
      841 agttcctgct cccggacctt catgccacgc gactacggtg taagttcccg gaggcacgtt
      901 cgcgattgtg aagctgccgt tttccgcact gaccgcgaag aatggatgct tcatcacgcc
      961 gacgtaggct ttcatccacg gatgctggtt acatttcacc ggcaccatcg cttctgcgac
     1021 gttcagcttg tgcgtcaaag gccctgcgcc gttcggctgc gactggttcc agtcagggtt
     1081 gttcttcggc gtgaagtgaa cgttgtgtgt cgtcgggtcg ctgttcttaa tcgagataga
     1141 ttgcttcgtt accacaccga aaacgtgcgg cttgtaatgg caaccgtcct gatcgagcgt
     1201 cgcgggcgcc gatggcgcgg cccacgcaaa gtcgccaacc ttcttgccgt cagccagcgt
     1261 tccatctttg atgtagacga acgtgttggc gagcttgccg tccttgacgg cccactcttc
     1321 cgacgtcaga ttcgccgact tggcgctgca ctgtggatcg gctgaggtgt cgatcttctt
     1381 cgcttcgggc gcagcaccgg cgtacgccac ggtgcccgtg atcgtgcctt cgtcgccctt
     1441 tgaggtgtaa gccgaaccgg tttccggtcc cgagtcagtg gtcgtatcgg tcttactgca
     1501 tgatgagccg agcgacagga cggccagagc cgccgttaac ccgagccaca aacgtgcgcg
     1561 tttagtgaac ataatctttt aagtcctcca aaaaattgaa actgtctgta aatttgcgta
     1621 aagcataccg taaagacaac ccacccgcta ccgcaggtaa tggttcattt gagatttctc
     1681 attcacaccg cggctttagc ccggtggcaa cctgtaacga tacaagcgaa accgtttaaa
     1741 cggtttccca gcgcgacccg cccaacctgc tcaccgcgct gaagcgacgg cgagaatgag
     1801 acacctctca aactaaacca gattgatacc ccagtcgctc atcgtctcag tcgatgactc
     1861 atcagccgac gactggaatt cacgtggtga ccactggtag cggacggttg agccgccggc
     1921 gccggagtcg aaggcgacgc tgacaacaat ctgcgctgct cgtccggtgt catcaggaac
     1981 atgtagcgca ccatcaattt cgcgtgatcg ccgtgatagt ttgtgacggc cgcgggcgga
     2041 ttaggaaggt tcactaccca ccgctcgcct tctttcttaa acagacccgt cggcatcgcg
     2101 gtcccgggcg aaatctgcgc cgggtccagc aaccaacgga acgtccaatc cggcttcaaa
     2161 cgctcagacg ccaaaaggaa gttcggcgca attgccgttg cgtcatgccc cggatcgcca
     2221 gtgatgtgac acttcaaaca agg
//
LOCUS       DATDBY010000010         2349 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1009488, whole genome shotgun sequence.
ACCESSION   DATDBY010000010 DATDBY010000000
VERSION     DATDBY010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2349
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1009488"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1015)
                     /locus_tag="VIT19_00190"
     CDS             complement(<1..1015)
                     /locus_tag="VIT19_00190"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY5837420.1"
                     /translation="MDSFIQTIPFFTPQQRALAMSVAEFTEREIEPRASADERDVEEA
                     LRSYVRLLSEQALLRYAAGAPGERFDLRAFCIIRETLSYFSALADLAFVMQGLGTYAI
                     SLAATEHVRDFWLDRARSGQAIAAFALTEPDAGSDVLALKTEARREGDGYIINGHKRF
                     ISNAGVADFYTVFARTGTREDGRAEISAFIVSARMPGFRVAERTEMIAQHPIGELEFK
                     DCRVPAEDMIGNPGDGLRLALQTLDMFRASVGAAACGMARRALDESLKYAKTREQFGK
                     PLSGHQLIQEKLADMITELDAARLLVYRAAYLKDAGDERSTREASEAKLFATEAAGRI
                     SDQA"
     gene            complement(1077..1466)
                     /locus_tag="VIT19_00195"
     CDS             complement(1077..1466)
                     /locus_tag="VIT19_00195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837421.1"
                     /translation="MEAWAVFSNHYHFVGHSPDEGADNLAQMVGFLHEKTAKWINTLD
                     KSAGREVWHNFWETKLTHKNSYLARLNYVHQNPVKHGLVYVANQYPWCSAGWFERTAR
                     PAQVKTIYGFKIDKLKVLDDYDVSLVE"
     gene            complement(1717..>2349)
                     /locus_tag="VIT19_00200"
     CDS             complement(1717..>2349)
                     /locus_tag="VIT19_00200"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY5837422.1"
                     /translation="VITGAGRAFCSGGDVVDIIGELTGRDAEGLLQFTRLTCELIHNM
                     RALPKPIIASLNGTVAGAGACIALASDIRIAAEEAKIAFIFVKVGLAGTDMGATYLLP
                     RVVGLAKATELLMTGDFTEAAEAERIGLYNRVVPRAQLETATREFAEKLARGPALGIA
                     KTKEMLNRELHMGFDSALEAEAVAQALCMQTPDFKEAHAAFIEKRPAKFG"
BASE COUNT          477 a          688 c          656 g          528 t
ORIGIN      
        1 cggcttgatc gctgatgcgg ccggccgctt cggtggcaaa tagttttgct tcactggctt
       61 cacgcgttga acgttcgtcg cccgcgtctt tcaagtacgc ggcgcgatat acgagcagcc
      121 gagccgcgtc gagttcggtg atcatgtccg cgagcttctc ttgaattaac tgatggccgg
      181 acaatggttt gccgaactgt tcgcgcgttt tcgcatattt caggctttcg tccagggccc
      241 ggcgcgccat gccgcatgcc gccgcgccca cgctcgcgcg aaacatatcg agtgtttgca
      301 gcgcgaggcg cagaccgtca cccggatttc cgatcatgtc ttcggccggc acgcgacagt
      361 ctttgaattc cagttcgcca atgggatgtt gcgcgatcat ctcagtccgt tctgcaacgc
      421 ggaatcccgg catgcgcgcg ctgacgatga atgcggaaat ctccgcacgt ccgtcttcgc
      481 gcgttccggt gcgagcgaac acggtataga aatcagcgac gcctgcgttt gagatgaagc
      541 gtttgtggcc gttgatgata tagccgtcgc cttcgcgtcg tgcttcggtt ttcaaagcca
      601 agacgtctga gcctgcgtca ggctcggtca aagcaaaagc cgcgattgct tgtccactgc
      661 gcgctcgatc caaccagaaa tcgcgcacat gttcagttgc ggcgaggcta atcgcgtacg
      721 tgcccaggcc ctgcatcaca aacgcgagat ccgctagcgc ggagaagtag gaaagcgttt
      781 cgcgaatgat gcagaaggcg cgcagatcga atcgttctcc aggcgcgccc gcggcgtagc
      841 ggagcaatgc ctgttcactc agcagccgaa catacgatcg caacgcttct tcaacgtccc
      901 gctcgtcggc gcttgcgcgc ggttcgattt cgcgttcggt gaattcggcg acgctcatag
      961 ccagcgcgcg ttgctgtggt gtgaagaatg gaattgtttg aatgaagctg tccattttaa
     1021 gaaccgctag tcatttggag tgcgccggca gagcgaagcg acgacggcgc tttggattac
     1081 tcgactaacg atacgtcata atcatcaagc accttcaact tgtcgatctt gaaaccgtaa
     1141 atcgtcttca cctgcgccgg tcgtgcggtg cgctcaaacc aaccagcaga acaccaggga
     1201 tactggttag caacgtaaac caatccgtgc ttcacgggat tctgatgcac gtagttgagt
     1261 ctggcaagat aggaattctt gtgggtaagt ttggtttccc agaaattgtg ccagacctca
     1321 cgtccggcgg acttgtcgag tgtgttgatc catttcgcgg ttttctcatg aaggaagcca
     1381 accatttgcg ccaggttgtc ggcgccctca tcgggcgaat gtcctacgaa gtgatagtga
     1441 tttgaaaaga cagcccaagc ctccaaccgc caaccaaatt ctttgagcca ccgaaagtaa
     1501 accgcgatga agtacgttca ggcgcttgcg ttcacgaaag tggtgcgcct tctgataagt
     1561 gcccgcagta acaatgtaag tgccgcgtgc tgatagttgg tgaagcggtg cgtgcggcca
     1621 ggtgattcgt tgaggcgtgc tcatttgcga atccatccaa agcgccgtcg ccgcttcgct
     1681 ctgccggcgc actccaaatt gccggcgcac tccaaatcac ccaaattttg ccggccgctt
     1741 ctctataaag gcggcgtgcg cttctttgaa atccggcgtt tgcatacaca aggcttgcgc
     1801 gaccgcttca gcttccaggg ccgaatcaaa tcccatgtgc agctcgcgat tcagcatctc
     1861 tttcgtcttc gcaattccca gcgccggtcc gcgcgcaagt ttctcagcga attcgcgcgt
     1921 cgcggtttca agttgcgccc gcggcacgac gcgattgtaa agcccaatcc gctcggcttc
     1981 ggccgcttcg gtaaagtcgc ccgtcattaa caactcggtt gccttcgcga gacccacgac
     2041 gcgtggcaac aaataagttg cacccatgtc tgtgccggct agtccaactt ttacaaagat
     2101 gaaagcaatc ttggcttctt cggcggcgat ccgaatgtct gaagccagcg cgatgcaggc
     2161 gccggcgccg gcaactgtgc cattcaggct ggcgataatc ggtttcggca gtgcgcgcat
     2221 gttgtgaatc agctcgcacg tcagccgcgt gaattgaagc agcccttcgg cgtcgcggcc
     2281 cgtgagctcg ccaatgatgt ccacgacatc tccgcccgag caaaacgcgc ggcccgcccc
     2341 ggtgatcac
//
LOCUS       DATDBY010000011         3210 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2650692, whole genome shotgun sequence.
ACCESSION   DATDBY010000011 DATDBY010000000
VERSION     DATDBY010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3210
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2650692"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            253..642
                     /locus_tag="VIT19_00205"
     CDS             253..642
                     /locus_tag="VIT19_00205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEY5837423.1"
                     /translation="MSKFLIALFLVAATFAVGLAQDQSQNPNDPPNMGAAPKEANGVG
                     RLDLRVVDEQGNPVKGAYAKLESTRTDGYFCESWNDTDERGVAVLPPIHMGTLKLKVK
                     AKGFKTMEIEVPASSLNEPVRITLIKK"
     gene            1045..2076
                     /locus_tag="VIT19_00210"
     CDS             1045..2076
                     /locus_tag="VIT19_00210"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY5837424.1"
                     /translation="MKTAFETYLEQQTEESWAAALVTLLRSVHEVDRNATQIWFAFYP
                     LSLHRALLETDDREKLARELLLQGDYELKAQIDSSHHFLYGHRFWPQVKSAVEQFLGT
                     ADGSGKLADQILAVARTVAGELKKDESLLVGITAVAFMTVRQVGLEAFKAAPGTLAID
                     KKHIKQSPESILHERAKDDSQGWLGFLKTVDKQWTITWDENDNGAKYKLREAQDLAWG
                     AAEDQSRDWSAIDPRRIEGPIPVECRSASCGTCWVGVLGGAEKLSDVAAREGKQIKLF
                     GYIDTAEPKPLIRLACQAQASGAVSIVIPPWNGQFGKYLKQSQKTGDATLGQSDAVPE
                     SANTRDVVN"
     gene            2135..2605
                     /locus_tag="VIT19_00215"
     CDS             2135..2605
                     /locus_tag="VIT19_00215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837425.1"
                     /translation="MMKRSTYLVILCLAVISLSGQAAGGSPDSKAKFNPPEWILGEWA
                     NVAESNADLVENFVFSKDDIQFTRGYLYHGKIQFSRAFKKHEVKETVEPDLYRVRLSA
                     GDDVQVYEFKRCRDEKCPATSREIMTYSFTKNDKIVREHSTSMTNVLFKRTRLK"
     gene            2641..>3210
                     /locus_tag="VIT19_00220"
     CDS             2641..>3210
                     /locus_tag="VIT19_00220"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY5837426.1"
                     /translation="MAGNSNPAIQSATVSPLLLVLGAAILWSTGGLFIKATDLSAFEL
                     SFGRSLLAAIIIAIFTRREGLRINRISAITAVLYAALLLLFVLATKLTTAANAIFLQY
                     TAPIYVLLLEPLFYKEKFRSRDFITVAACLAGMSLFFVGKLRPQDVTGNLFALASGVC
                     FAFFFLLLRHSKARQVNRAVSTIYGNLLVV"
BASE COUNT          760 a          865 c          855 g          730 t
ORIGIN      
        1 aagagggaat ttaggtagtt gctgaattat cagcgtacat gcgcgcaagt caaacactcg
       61 gtcgcaacaa aagccttccc agcagcccat tcgactcgct ataatccaaa agcaggacgc
      121 ctgtaatggc aaccctgaaa gacccctgag acactaagtt tagcgggtta caagttggct
      181 caacagccgc atcgcaaacc tcacacaatc gatagcgtcg gcttcacaat aaacaaggag
      241 tttcaaagta ttatgtcgaa gtttctaatc gctctatttc tagttgccgc gactttcgca
      301 gtcggtctgg cgcaggatca atcccaaaat cccaacgatc cgcctaacat gggcgccgcg
      361 ccgaaggaag cgaacggagt cggacgcctt gatctgcgcg tagtcgacga gcagggaaat
      421 cctgtcaagg gcgcctacgc caaactggaa tccacgcgca cggatggata tttctgtgag
      481 agctggaatg acaccgacga gcgtggtgtg gcggtcctgc cgcccattca catgggtacc
      541 ctgaagctga aagtgaaagc caagggtttc aagacaatgg aaattgaagt tccggccagt
      601 tccctcaatg agcccgtgcg gataacgttg atcaaaaagt agccagcact caacttaatc
      661 gcgggttttt gctccgctag gagcaggatg tttatagccc gcgccatcgt aagaaattgc
      721 tccacgcgaa gcgagagcac atctcgcttc gcgtggagtt ctttttatca gtgacgacca
      781 ataaggaaat cgcttttcat tcacacctcg cttcagcgag gtgtttgggc aggcagcagt
      841 gtcatcaacc gtttcaacgg ttttcgttaa gccgttaaaa cggctgagtt ctaggacgct
      901 gagctcgtcc acctcgctga agcgaggtgt gaatgagagc tttgagacca ctgaaattag
      961 gggcccagct ttttcggagc acccgatgct gttaaactac acgttttctt agggcgagaa
     1021 attcctgtct gaacgctggt gatcatgaaa actgctttcg aaacatacct ggaacaacag
     1081 accgaagagt cctgggcggc cgcgctcgtg acgctgctgc gctcagttca cgaagtcgac
     1141 cgcaacgcga cgcaaatctg gttcgcgttt tatccactgt ctttgcatcg cgcgcttctg
     1201 gagactgacg atcgcgagaa gctcgcccgc gagctgcttc tccagggcga ttatgaactg
     1261 aaagcccaga tcgattcgtc gcatcacttt ctttatgggc atcgtttttg gcctcaggtt
     1321 aaatctgcgg ttgagcagtt tttaggcact gccgacggat ccgggaaatt ggctgatcaa
     1381 attctcgccg tcgcgcgcac tgttgccggc gaactgaaaa aagacgagtc gctgctggtc
     1441 ggcattacgg cagttgcctt catgaccgtc cggcaagtcg gactcgaagc attcaaagcc
     1501 gcgccgggca cactcgcgat cgacaaaaaa catatcaagc agagtcctga aagcatcctg
     1561 catgagcggg ctaaggacga cagtcagggc tggctaggtt ttctcaagac ggttgataag
     1621 cagtggacaa tcacatggga cgagaacgat aacggagcga aatacaaact gcgcgaggcc
     1681 caggatcttg cgtggggcgc cgccgaagat cagtcgcgcg actggagcgc gatcgatccg
     1741 agacgaattg aaggcccgat ccccgtcgaa tgtcgctcag cttcttgcgg cacgtgttgg
     1801 gtgggcgtgc tgggcggcgc ggagaagctt tcagacgtcg ccgcgcgcga gggcaagcag
     1861 atcaaattgt tcggctacat cgacacggct gaacccaaac ctctgattcg tttggcgtgc
     1921 caggcgcagg ccagcggcgc cgtctcgata gtgatcccgc cctggaatgg gcaatttgga
     1981 aagtatctca aacagtcaca aaagaccggc gatgcgactc ttggtcagtc ggatgcggta
     2041 ccagagtccg cgaacacacg cgacgtcgtg aattaaattg gttgctgaga ggatctcgca
     2101 aagccgcaaa ggaaaccgag agagcgaaaa acacatgatg aaacgatcta cctatctggt
     2161 tattctttgc ctcgccgtca tctctttaag cggacaagcc gccggagggt cgccagactc
     2221 gaaggccaaa ttcaatcccc cggagtggat acttggtgag tgggcgaatg tggctgagtc
     2281 gaacgcagac ctcgttgaaa actttgtttt ttctaaagat gacatccaat ttacccgcgg
     2341 ctatctctac cacggtaaaa tccagttcag tcgcgcgttc aaaaaacatg aagtgaaaga
     2401 gacagtcgag cctgatctct atcgcgtccg gttgtccgcc ggagacgacg tacaggttta
     2461 tgagttcaaa cgttgtcgcg acgaaaagtg tcccgcaacc tcgagggaaa taatgacgta
     2521 ttcattcact aagaacgata agattgtccg ggagcactcg acatcgatga ctaacgtttt
     2581 gttcaagcga actcgcctta agtaagagtc tgttattcca ttcgtgattc gaccgcaccg
     2641 gtggccggca actctaatcc tgcaatccag tccgcaacgg tctctccgct gctgcttgtt
     2701 ctcggcgccg cgatcctttg gagcaccggc ggcctcttca tcaaagcgac tgacctctct
     2761 gcatttgaac tttcgtttgg acgttcgctg ctggcggcga tcatcatcgc aatcttcacg
     2821 cggcgcgaag gtctcagaat caatcgcatc agcgcgatta ccgcagtcct ttatgcggcg
     2881 ctactgctgt tgtttgtgct cgccacaaaa ctaacgacgg cggcgaacgc catctttctg
     2941 caatacacag ccccgatcta cgtgctcttg ctcgagcccc ttttctacaa agagaagttc
     3001 cgctcgcggg atttcatcac cgtcgccgct tgtctcgccg gcatgtcgct ttttttcgtc
     3061 ggcaagctga ggccacagga cgttaccggc aatctcttcg cgttggcttc cggcgtttgt
     3121 ttcgccttct tctttctgct gttgcggcat tcgaaagcgc gtcaggtcaa ccgggccgtc
     3181 tcaacgatct atggcaacct gctggttgtt
//
LOCUS       DATDBY010000012         7188 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2428586, whole genome shotgun sequence.
ACCESSION   DATDBY010000012 DATDBY010000000
VERSION     DATDBY010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 7188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7188
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2428586"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            115..1068
                     /locus_tag="VIT19_00225"
     CDS             115..1068
                     /locus_tag="VIT19_00225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837427.1"
                     /translation="MNKFRFTFKLMAIAIFMFAFASMAQAQATRTWVSGVGDDVNPCS
                     RTAPCKTYAGAISKTAANGEISTLDPGGFGAVTITKGMTIDGTTGAGFGSILASGTSG
                     VIINDAGVSVAVVTLRNLSINGASTTAGSGIRFLAGKALIIENCDISGFTGTGSVGRG
                     ISVELTAGPRNVYIKDTNITNCTVGARIGATASFVTAVFDNVNIDSTGNQVAATTGIE
                     NAAGGFSVIRDSTISRWQNGINNTGGANSGATLIGTTLFSNVTGLNGGASTSRSSMSS
                     YLSNTTGVALAGGAFNSGCDNFFNGNTSDISGGAITNNCVK"
     gene            complement(1241..2245)
                     /locus_tag="VIT19_00230"
     CDS             complement(1241..2245)
                     /locus_tag="VIT19_00230"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF018696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5837428.1"
                     /translation="MISNWVRGRLYRLMRIAPGTLAEMRANIIFNGFGHFLHGAGSRR
                     DRDVSENEYSWFAGSTIDYVHTRDIEKFAIIDDEVRKVSMREVISRCYAERNDILAQL
                     QFKSVLEVGAGELTFMHSVYERFGPSLDLYGLDITLNRVLHGLRFAQSRQMPVTVVQA
                     DGTAIPFPDNSFDLVVSHHALEQMPTIFRDAISEMIRVSRKHIVLFEPFYQSASLLEK
                     LRMRTSDYVRGIYPFVRTLPGVRLHPPFVCKNHGTPYNHTGVFLLEKTDEGVSNDPRV
                     ICPVSRGELQAFPDGHYSVKSSLFYPTVRGVPVLYKKYAQVITADLLTAPPAETREMV
                     "
     gene            2597..3493
                     /locus_tag="VIT19_00235"
     CDS             2597..3493
                     /locus_tag="VIT19_00235"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5837429.1"
                     /translation="MSTQSNRLSIDSATTSASAQEADELPRRPFVIIEASRGWRAINL
                     RELWVYRELLYLLIWRDIKVRYKQTLLGVAWVVLQPVLTTLVFTVFLGILLRVPTNGP
                     PYLLFVYSGLLMWIFFSSAITTSGISLVGNAQLLTKVYFPRALLPVAAVAARLMDFAI
                     GFVILILLMFFYGVRPTSSLFLLPVLVALMILLALAVGMIASALNVKYRDVGVLIPVL
                     LHLWMYASPVVYPASLVPGRWRQLYELNPMAGLIGGFRTAVLGGPINWTSLAVSAAVI
                     IGLLIIASIQFRRMENQFADVI"
     gene            3505..4773
                     /locus_tag="VIT19_00240"
     CDS             3505..4773
                     /locus_tag="VIT19_00240"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5837430.1"
                     /translation="MIKIENVSKQYRLGTNQLAYQTLRDRLADIASFRINRRGNGNGN
                     GNGNDNTIWALRDISFEVAKGEVLGIIGRNGAGKSTLLKILSRITEPTTGRIELYGRV
                     GSLLEVGTGFHPELTGRENIFLNGVIMGMKRRELALKFDEIVAFAEISKFIDTPVKRY
                     SSGMYVRLAFAVAAHLEPEILIVDEVLAVGDDMFQKKCLGKMATIAGEGRTVMFVSHN
                     MPAVTNLCPRAILLDHGGVVRDGNSADVTSYYLSSGGASDADREWDDISTAPGDEIVR
                     LRRVSVVDENGDVCPSIDIRKKVGIRLEYDILHEGRVLLPGFGISTEGGQLAFYAGDS
                     EPDWQNSPRPKGRYVSTGWIPGNFLNAGTMIVGVTVSQPRPTHKHVHEQGVLSFQVID
                     RMGPGTARGNYPGRHFAGAVRPLLKWETDS"
     gene            4926..5696
                     /gene="rfbF"
                     /locus_tag="VIT19_00245"
     CDS             4926..5696
                     /gene="rfbF"
                     /locus_tag="VIT19_00245"
                     /EC_number="2.7.7.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018040698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047343 - glucose-1-phosphate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate cytidylyltransferase"
                     /protein_id="HEY5837431.1"
                     /translation="MKAVILAGGLGTRLAEETEVKPKPAVEIGGYPILWHIMKHYAHY
                     GIGEFFIALGYRGEVIKRYFLDYYTCNGNLTIDFSKGEVTTRKKDCEDWIVHLEDTGE
                     DTNTGGRVKRLEPYLKDGTFMVTYGDGVCNVDLKKLAEFHKAHGRVATITAVRPPARF
                     GGLVFDGDVVKEFTEKPQIGEGWINGGFLVFEPAVFEYLAGDDSSLEADALERLAADD
                     QLAAYRHEDFWQCMDTLRDKRFLESLWQQKQAPWKVWQ"
     gene            5687..6688
                     /locus_tag="VIT19_00250"
     CDS             5687..6688
                     /locus_tag="VIT19_00250"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEY5837432.1"
                     /translation="MAVEFWRDRPTFVTGATGLVGGWLVKNLVAAGADVVCLVRDWVP
                     QSEFSRTGLSDKVKVVRGDVQDQALLERVLGEYEVDTVIHLAAQTIVPIANRNPASTF
                     ESNIGGTWSLLEASRRSPLVKQIVLASSDKAYGEHDQLPYTEDAPLQGRHPYDVSKSC
                     ADLIAQSYATTFGLPVVITRCGNFYGGGDLNWNRLIPGTIRSVLRGQRPVIRSDGQHI
                     RDYFYVEDGAAVYMLLTESLAGNPDLKGQAFNFSNETQVTVLEIVQKLLSLMKSDLEP
                     DIRNEANNEIRHQYLSASKARKHFNWTPRFSLDEGLQETIKWYKALLGDPLDKSAAR"
     gene            6685..>7188
                     /locus_tag="VIT19_00255"
     CDS             6685..>7188
                     /locus_tag="VIT19_00255"
                     /inference="COORDINATES: protein motif:HMM:NF020013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837433.1"
                     /translation="MNTPPVRCRSCDQTNLTPILSLGETPLANALLSREQLNDIEEKF
                     PLELVLCPSCALVQITETVPPEKLFREYFYLSSFSETLLRHSKENVEQLILSRRLGSD
                     SLVIEIASNDGYLLQYYKQAGVPVLGIEPARNIAVTAEERGIPTLCEFFDGELAENLK
                     AQGKSADV"
BASE COUNT         1604 a         1902 c         2018 g         1664 t
ORIGIN      
        1 gatgagcatt ttctcgttat caacccggga atactcggcg cagcagtggt ccggaacaga
       61 tccgtgttct actggcggcc atccccaact tcaaatgaaa aaaggagact ccaaatgaac
      121 aagtttcggt tcactttcaa actaatggca atcgcgatct tcatgttcgc ttttgcttcc
      181 atggcccagg cgcaggcaac ccgcacctgg gtatcgggtg tcggcgacga cgtaaacccc
      241 tgcagccgca ccgcgccctg caaaacctac gctggcgcta tctccaagac cgcggcaaac
      301 ggtgagatta gcaccctcga tccaggtggt ttcggagcgg tgacgatcac aaaaggaatg
      361 acgattgatg gcactaccgg tgcgggtttc ggatccatcc tggcttccgg cacatcaggc
      421 gtcattatta atgacgcggg tgtcagtgtt gccgtcgtca ccttacggaa cctttctatt
      481 aacggcgcaa gcaccacggc cggtagtgga attcggttcc tggcgggcaa agcgctaatt
      541 atcgaaaact gtgacatctc cggatttacc ggcaccggct cggtcggaag gggcatcagc
      601 gtcgaactca cggccggccc gcggaacgtg tacatcaagg acacgaacat caccaattgc
      661 acagtcggcg ccaggatcgg ggcgacggcc agcttcgtta ccgcggtttt tgacaatgtg
      721 aatattgact cgacgggtaa ccaggttgcc gcaactacgg gtattgaaaa tgcggccggt
      781 ggattctccg ttattcgcga ttcgaccatc tcacgttggc agaatggcat taacaacacg
      841 ggcggcgcca actccggagc caccctgatt ggcacaaccc tctttagcaa cgtcaccggc
      901 ctcaacggcg gtgcgagcac atcgcgttct tcgatgtctt cgtacctaag caataccacc
      961 ggcgtcgcgt tggccggcgg ggcgtttaat tccggttgtg acaacttctt taatggcaac
     1021 acaagcgaca ttagcggcgg tgccataacc aacaactgcg ttaagtaacc tcgtgagccc
     1081 ttctaattag gcttgcgaca atccgcgccg tagtcgcggt taacctggaa tcgcccgcgg
     1141 gcgcgtcagt ctcttccctt gatgactgac gcaccgcggg cgatttttca tctaagttag
     1201 tcaggccgcc gcagcttctg tgctattcaa cgcagagttg tcagaccatc tctcttgtct
     1261 cggcgggcgg ggccgtcagc aaatcggcgg taataacttg tgcatatttc ttgtaaagaa
     1321 cgggaacacc gcgaaccgtc gggtaaaaga gggacgactt cacggaataa tgtccgtctg
     1381 gaaacgcctg caactcgccg cgggacacag ggcagatcac ccgaggatcg ttgctgacac
     1441 cttcgtcggt cttttccaaa aggaacacgc ctgtatggtt gtagggggtg ccgtggtttt
     1501 tgcaaacaaa cggcgggtga agacgcactc ctggcagagt gcgcacgaac gggtagatcc
     1561 cacggacgta atccgacgtt ctcattcgca gtttttcgag cagcgacgcg ctctgataaa
     1621 agggttcgaa caggacaatg tgctttcgac tgacgcgaat catctcggaa atggcatctc
     1681 tgaaaatcgt cggcatctgt tccagcgcgt ggtggcttac gaccagatca aaggaattgt
     1741 caggaaacgg aatggctgtg ccatccgcct gcacgaccgt gaccggcatc tgtcgtgatt
     1801 gagcgaaacg tagtccatgg agcacgcggt ttagcgtaat gtcgagacca tagagatcga
     1861 gcgacggccc aaatctctcg tagacactgt gcatgaatgt cagttcaccg gcaccgacct
     1921 cgagaacgga cttaaactgc agttgcgcga gaatgtcatt gcgctcagcg taacaacggc
     1981 tgatcacctc gcgcattgag accttgcgga cttcgtcgtc gatgattgcg aatttttcga
     2041 tatcgcgcgt gtgaacataa tcgatggtac ttcctgcgaa ccacgaatac tcgttctcgg
     2101 atacatcacg atcgcgtctc gaaccggcac cgtgcaagaa gtgcccaaat ccattgaaaa
     2161 tgatatttgc ccgcatctcg gcaagtgtgc cgggcgcaat cctcatcagc cgatacagcc
     2221 ttcccctaac ccaattcgat atcatcttcg ttccatcctc tctggagttg cgcaattctg
     2281 cttgaaatga gcaccaatgt aaaaagtgag tcttttccta atttggattc ttatttatgt
     2341 ccatgtgaac tccaccgcgc tgaccgtcgc ggggggactg gtcgtgagac taatccggtc
     2401 gaagcaggcg gtttcacgcc aagacgcgaa ggcgcaaagc atcgccaagg cggatcagga
     2461 cttaattcgt tgcgagcgtt tgaccccgcg acttcgcgac actagactga gtttttatca
     2521 ttattgcctc gcaccgccgg ttacacttcc ggtcaatcga ggccacgcca aatctttgcg
     2581 agctttcgcg attcccatga gcacccaaag caatcgccta tcgatagatt cagccacaac
     2641 cagcgcatca gctcaggaag ctgacgagtt gccacgccga cctttcgtga ttatcgaggc
     2701 tagccgcggg tggcgggcga tcaatcttcg agaactctgg gtctatcgcg aactgcttta
     2761 cttgctcatc tggcgagaca ttaaggtgcg ctacaagcag acattgctgg gcgttgcctg
     2821 ggtggttctt cagccggtct tgactacgct cgttttcaca gtcttcctcg gtattctgct
     2881 tcgcgttccg accaatggcc cgccgtatct gttgttcgtt tacagcggcc tgctgatgtg
     2941 gatctttttc agctcagcta ttaccactag cggtatcagc cttgtcggca atgcgcaatt
     3001 gctgacgaaa gtttactttc cccgggcgtt actgcctgtg gcagcagtcg cggcccgatt
     3061 gatggatttc gcgatcggtt ttgtgattct gattctgctg atgttctttt acggcgtgcg
     3121 cccgacgtcg agccttttcc tcttgccggt gctggttgct ctgatgatcc tgctggcgct
     3181 tgcggtcggt atgattgcgt cagccttaaa cgtaaagtac cgggacgtcg gtgtgttgat
     3241 tccagtgctg ctgcatttgt ggatgtatgc ctctccggtc gtgtatccgg cgagtttagt
     3301 gccaggtcgc tggcgtcaac tttacgaact caatcccatg gctggcttaa tcggtgggtt
     3361 tcgaactgcc gtgttaggcg gcccgatcaa ttggacgtca ctggccgtct ccgccgcggt
     3421 cattattggt ctgctgatta tcgcgtcgat ccaattcaga cgcatggaaa accaatttgc
     3481 tgacgtcatc tgatgcgtaa cccgatgatt aagattgaga atgtctccaa gcaataccgg
     3541 cttggcacaa accagcttgc ctatcaaacc ttgcgcgacc gtctcgccga catcgccagc
     3601 tttcgaatca atcgtcgggg caacggaaac ggaaacggaa acggaaatga caacaccatc
     3661 tgggcgttgc gtgacatcag ctttgaagtt gccaaaggtg aagtgttggg aattatcggc
     3721 cgcaatgggg ccggaaaatc taccttactg aagattcttt cgcgtattac tgaaccgact
     3781 acgggccgga tcgaattgta cggccgagtc ggcagtctgc tggaagtggg gaccggtttt
     3841 caccctgagc tgaccggccg cgagaacatc tttctgaacg gcgtcatcat ggggatgaag
     3901 cgccgcgagt tggctctaaa attcgacgag attgtggcgt tcgcggagat tagcaaattc
     3961 atcgacacac cggtcaagcg ctatagcagc ggcatgtacg tccgtttggc ctttgcggtg
     4021 gccgcgcatt tagagcctga gattctgatc gttgatgagg tgctggcggt cggtgatgac
     4081 atgttccaaa aaaagtgcct gggcaaaatg gctacgattg cgggagaagg ccggaccgtc
     4141 atgttcgtat cgcacaatat gcccgcggtc accaatctct gtccccgggc gattctcctg
     4201 gatcatggcg gggtggttcg cgatggtaac tcagcggatg tcacgagtta ctacctgagt
     4261 tccggagggg cgagcgacgc ggatcgtgag tgggacgaca tctcgacggc tccgggcgat
     4321 gaaattgtac gtctgcggcg ggtttctgtc gtcgacgaaa atggggacgt ctgtccgtcg
     4381 atcgatattc gtaagaaagt aggaattcga ttggagtatg acatcctgca cgagggtcgt
     4441 gtgctgcttc ccggcttcgg tatctcgacc gaggggggcc aactcgcgtt ttacgccggc
     4501 gactcggagc cggattggca gaattctccg cgtccaaaag gtcgatacgt cagcaccggc
     4561 tggataccag gtaacttcct aaatgcagga accatgattg tcggcgttac ggtcagccag
     4621 cctcgcccta cacataaaca cgtgcatgaa caaggtgtgt tgtcgtttca agtaattgac
     4681 cgaatggggc cgggtactgc ccgtggtaat tatccgggcc gccatttcgc aggtgcggtc
     4741 agaccgctgt taaagtggga aacggattcc taacgcgaaa aagaagggag cacggaacgg
     4801 tgtaagccgg agtattttga ttggcatctt cgaactcgaa gctgatcgca tcgctccctt
     4861 cattttgcaa tgatactatc tcgtttgtcg ttcgatcatt ctcaaaaata tccgaaggtt
     4921 ggtctatgaa ggcagtgatt ctagccggag gcttgggcac acgtctggcg gaagaaaccg
     4981 aagtgaagcc caaacccgcc gttgagatcg gtggctatcc aatcctctgg cacatcatga
     5041 agcattatgc tcactatggg attggagagt tctttattgc gcttggttac cggggagaag
     5101 ttatcaaacg gtacttcctt gactattaca cctgcaacgg caacctgacg atcgattttt
     5161 cgaagggcga agtcacaacc agaaagaaag attgcgagga ctggattgtg cacctcgaag
     5221 atacgggtga ggacactaac acaggcggcc gcgtcaaacg tctggagccg tacctgaagg
     5281 acggcacgtt catggtcacg tacggcgacg gcgtctgcaa cgtcgatctg aaaaagctgg
     5341 cagagttcca caaagcacac ggccgggttg cgacaattac cgccgtccgg cccccggccc
     5401 gcttcggtgg tctggtcttt gacggagatg tggtgaagga gttcaccgaa aagccgcaaa
     5461 tcggcgaagg ctggatcaat ggtgggttcc tggtttttga gcccgccgtt tttgaatatt
     5521 tagccggcga cgacagcagt ctggaagccg acgcgttgga aagattggcg gccgacgatc
     5581 aactggcagc ttatcgccac gaagattttt ggcagtgcat ggatacgctt cgcgacaaac
     5641 ggtttctgga gtctctttgg cagcagaaac aggccccttg gaaagtatgg cagtagaatt
     5701 ctggcgcgac cggcccacgt ttgtgacagg cgccacgggt ctcgtgggcg gctggctggt
     5761 gaagaatctg gtcgcggcgg gcgcagatgt tgtttgcctg gtgcgcgact gggtgcccca
     5821 gtcagaattc tcgcgcacgg gtctttccga caaagtaaaa gtagtccgcg gcgacgtgca
     5881 ggatcaggcg ctgcttgagc gcgtgttggg cgagtacgaa gtcgacacgg tcattcatct
     5941 cgccgcccag acaatcgtgc ccatcgcgaa tcgcaatccg gcgtcaacgt tcgagtcgaa
     6001 catcgggggt acctggtcgt tgctggaagc gagccgtcgc agcccgctgg tgaagcaaat
     6061 cgtgctggct tcttcagata aggcgtatgg cgagcatgat cagttacctt acacggaaga
     6121 cgcgccgctg cagggacgtc acccgtacga cgtaagcaag tcgtgcgcgg atctaatcgc
     6181 ccaatcatac gccacgacat tcggtctgcc ggtagtaatc acgcgctgtg gaaactttta
     6241 cggcggcggc gatctgaact ggaatcgcct gattccaggc accatccgat ctgtcttgcg
     6301 cggtcagcgg ccggtgattc gttcagacgg ccaacacatc cgggattact tctatgtcga
     6361 ggacggcgcg gctgtttaca tgcttctgac agagagtctg gccggcaatc cagacctgaa
     6421 agggcaggcg tttaattttt cgaacgagac tcaggtgacg gtccttgaaa ttgtgcagaa
     6481 attactttcg ctgatgaagt ccgatctgga acctgacatc cgtaacgaag cgaacaacga
     6541 gatccgacat cagtatctca gcgccagcaa agcccgcaag catttcaatt ggacgccgcg
     6601 attttctctc gacgaaggat tacaggaaac aatcaagtgg tacaaagcgc ttttgggaga
     6661 ccctcttgat aaatccgccg caagatgaat acgcctccag tccgctgtcg ctcttgtgac
     6721 cagacaaatc tgacgcccat cctctcgctc ggagagacgc cgttagccaa tgcgctgctg
     6781 agtcgcgagc aacttaacga catcgaggaa aagtttcccc ttgagcttgt tctctgtccc
     6841 agttgcgcgc tggtacaaat cactgaaaca gtgccgccgg aaaagctttt tcgcgaatat
     6901 ttctacctgt cgtctttttc cgaaactctg ctgcggcatt caaaggaaaa tgtcgagcaa
     6961 ctgattcttt cgcggcggct gggttcggac agtttagtga ttgagatcgc gagcaacgat
     7021 gggtacttac tccagtacta taaacaggca ggggtcccgg tgctgggaat tgaaccggcg
     7081 cggaacattg ccgtcaccgc tgaagaacgc ggtatcccga ccttgtgtga gttcttcgat
     7141 ggcgagttgg ccgagaacct gaaggcgcag ggaaaaagtg cagacgtc
//
LOCUS       DATDBY010000013         2097 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2235402, whole genome shotgun sequence.
ACCESSION   DATDBY010000013 DATDBY010000000
VERSION     DATDBY010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2235402"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1005)
                     /locus_tag="VIT19_00260"
     CDS             complement(<1..1005)
                     /locus_tag="VIT19_00260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4398 domain-containing protein"
                     /protein_id="HEY5837434.1"
                     /translation="MKISRGLLSFLTLPLIVVALCVGALAQSDVRRTTTAITYPLDQT
                     IEVPFRGTTRLPRLKGDAKVRRQGRRGTRVQLSLDHLPRGYELGGAYTTFVLWAISPD
                     GTVDNLGEIKRSGSGIIDSKIDVTTPLQTFALIVTAEPHFLVRAPSRMVVLENLRPAM
                     PRDAQIDTVPVTYIGNSSDYFRDASVPTIAQSDFRDIPNALLGARQALNLARYAGAER
                     DAPNELRAAVADLEQAEAALRMRQAEAEVDVLARQATSSAAKAEAMALARRAARERRE
                     EIERRDQAVRSAEETAASANQEITRLQKDLGNERHARELAERDSLRSQEQLRDARTEI
                     A"
     gene            complement(1229..1402)
                     /locus_tag="VIT19_00265"
     CDS             complement(1229..1402)
                     /locus_tag="VIT19_00265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837435.1"
                     /translation="MLYYIGSLFLIIWLVLKFGMHKGGFVHTLLLTGLGFIAVQFVQH
                     LRTRQYEREQRDS"
     gene            complement(1454..>2097)
                     /locus_tag="VIT19_00270"
     CDS             complement(1454..>2097)
                     /locus_tag="VIT19_00270"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5837436.1"
                     /translation="ISYRGARAVAVALDDGAMHVFDESGRLMIAANAGSLTTTGPLMI
                     RTARGELVLVGTRSGLTALAAEDLRPLGRVTLKDDSPRGSLIAQDLDSDGRSEVVMFT
                     ERGRVVIVKSDEGRVVWEADAGRAESAAFADVNGDRVLDLLLAGREGFAFALSGRDGS
                     VVWKDERVSSVTANHAPGAAPRGTLAVPSVSGVLIIAADPNRTGLRAIEFPKR"
BASE COUNT          423 a          629 c          627 g          418 t
ORIGIN      
        1 ggcgatttcg gtgcgcgcgt cgcgaagttg ttcctgcgac ctcagcgaat cgcgttcggc
       61 aagctcgcgt gcgtggcgct cattgccgag gtctttttgc agtctagtga tttcctgatt
      121 ggcggacgcg gccgtttctt ccgcgctccg cacggcctga tcgcgacgct cgatctcttc
      181 gcgtcgctct cgcgcggcgc gccgggccag cgccatcgcc tccgcttttg ctgcgctact
      241 ggttgcctgc cgcgcaagaa catccacttc cgcttcagcc tggcgcatgc gcagcgcggc
      301 ttcagcctgt tcgagatcgg cgacggccgc gcgcaactcg ttcggggcat cgcgttccgc
      361 acccgcgtac cgcgcgaggt tcagcgcctg ccgcgcaccc agcaaagcgt ttggaatgtc
      421 tcgaaaatcg gactgagcga tggtgggaac gctggcgtcg cgaaaatagt cgctggagtt
      481 gccgatgtag gtgaccggca cggtatcaat ctgcgcatca cgcggcattg ccgggcgcaa
      541 gttctccagc acaaccatgc ggctcggagc gcgcaccaga aaatgcggtt cggccgtcac
      601 gatcaatgcg aaggtttgca gcggcgttgt cacatcgatc ttcgaatcga taatcccgct
      661 gccgctgcgc tttatctcgc cgaggttatc gaccgttccg tcaggcgaga tggcccacaa
      721 cacgaacgtc gtgtacgccc cgcctaactc atatccgcgc ggcaaatgat ccaggcttaa
      781 ctggacgcgg gtgccgcgac gtccctggcg ccgaactttt gcatcgcctt tcaagcgcgg
      841 caaacgcgtc gtcccgcgaa acggcacctc gatcgtttga tccaatggat aagtgatcgc
      901 ggtcgtggtt cgccgcacgt cgctctgggc aagagctccg acacagagag caacaacaat
      961 tagcggaaga gtaaggaacg acagtaaccc gcgagatatt ttcatcaaac cctctaattg
     1021 aagaacaggc tacctgcctg ttcagtttat gtcgagcaga ccaggctgat tcctgtccta
     1081 tgtcgtagat gcacggcccg aggttaattg ttgccgaacg gggagaaact gacaagaagg
     1141 tttctgctgg gacgggccgc actccctctc tctctgggag agggctgagg tgagggtgcg
     1201 aagcttaggg tggggggaga gggaaagatt aagaatcgcg ttgttcgcgc tcatactgcc
     1261 gtgttcgcaa gtgctgcacg aattgaactg cgatgaaacc taaacccgtc aatagaagcg
     1321 tgtggacgaa tcctcccttg tgcatcccga acttcaggac cagccagatg atgagaaaca
     1381 atgatccgat gtaatagagc atttagagcc tggggcccgt cagccgggca agaggcgcat
     1441 tgtaattgga gagctagcgt ttaggaaatt cgatcgcgcg gagacctgtg cgattcggat
     1501 cggcggcgat aatcaaaaca ccggaaacgg agggcacggc aagcgtcccg cgcggagcgg
     1561 cgccgggggc atggttcgcg gtgacactcg agactctttc gtctttccag accacggagc
     1621 catcgcggcc ggacagagcg aatgcgaatc cttccctgcc cgccagcaac aagtcgagca
     1681 ctcgatcgcc gttcacgtcc gcaaaggcgg ctgattcggc acgaccggcg tcagcttccc
     1741 aaacgaccct gccttcatcg gacttgacga tgacaacgcg accgcgttcc gtaaacatca
     1801 ctacttccga tcgtccatcg ctgtccaggt cctgcgcgat caaacttccg cgcggcgagt
     1861 cgtctttgag agttacgcgg ccgagcggac ggagatcctc ggcggcgagt gccgtcaatc
     1921 cgctgcgcgt tccgaccaac acgagttccc cacgtgctgt gcgtatcatc aatggcccgg
     1981 tcgttgtgag gcttcccgcg ttagcggcaa tcattaatct gcctgactcg tcaaagacgt
     2041 gcatggcgcc atcgtcaaga gcgacggcga cagcgcgcgc gccgcggtaa ctaatgg
//
LOCUS       DATDBY010000014        14097 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_3047791, whole genome shotgun sequence.
ACCESSION   DATDBY010000014 DATDBY010000000
VERSION     DATDBY010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 14097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14097
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3047791"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            605..736
                     /locus_tag="VIT19_00275"
     CDS             605..736
                     /locus_tag="VIT19_00275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837437.1"
                     /translation="MANAPQDFHTSSSTFQDFHTKQQHIPGEITLIVGPSRDTTRQR"
     gene            1218..4589
                     /locus_tag="VIT19_00280"
     CDS             1218..4589
                     /locus_tag="VIT19_00280"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY5837438.1"
                     /translation="MDVGGWLRNLDLGQYESSFIENAVDSDVLPELTEGDLEKLGVPL
                     GDRKRLIRAIKTMVSGPAGALITSKAENAPGDLSIMNATERRHLTMMICDLVDATALS
                     ARLDPEDMRAVMDAYHAACARITLFYDGFLAHFRDDRISAYFGYPYAHEDDAERSVRG
                     GLDIAAAVARLKTPAAAPLSVRIGIATGLVLVRSFDGEGPLRDHSVVEEAPNTAARLQ
                     ALVAPGTVVIAASTRRLLGARFRLRDLGRHEVKGIGEPVAAWAVDGITDSGSRLEAVR
                     AAGLTDLTGRENEIEFLLKRQRLAWNGEGQIVLITGEPGIGKSRLAAALEDRLADEPH
                     TVLRYQCSPYHTNSALYPFISQLARAARFKAHDTAEQRLDKLEALLAIASPSGQDTAS
                     IFAELLSIPFDDRYPKLVHNPVQQRRRTFAALLDQFENLSRQKPILLLFEDAHWADAT
                     SLELLNLTVERIRYLPVLALFTFRPEYEPPWIGLRNVGTLTLDRLDRSSVESIVTHVA
                     GGRVLPAQVMKQIVDQTDGNPLFVEELTKALLEGDILIKGVDGYRVNEPLPPLAIPAT
                     LQDSLMARLDRMGAVKEISQIGAAIGREFSYSLMRELVRGDETVLKGGLGKLEQAELV
                     FRRGEPPEAIYTFKHALVRDAAYESLLKSRRHQLHGQIGRAMEEKFADIVVSQPEILA
                     HHFTEAGLVDPAIEYWLKAGNLALRRSANAAVEHLKQGLKLLPNVDDPMLRNKSELLL
                     QTSLGNSLREIEGWSTHNVKHAYTRAIQLCKENKLEKYSSPAVFGLWTWNFLRATLGE
                     AQALAEHLLNIAENVGDSVYRVLAHQALGFTLFGQGKFAAAHIELERSMVLCQDGEAT
                     AYLELSAQDPRSHVRSYDAMTLWFLGFPDQALLRSTEACHYADTSRHPFSEAMARTIN
                     LRVHQFRGEAGAVAGQANAAIAFCEEHDFVHYLAMALILRGWARAKEGEFEEGISEIQ
                     EGLKKERATGALLFESYSLALMADACIKNDRYGQALEALKQAQLRLEEESSGCFYEAE
                     IYRLFGETHLRSNQNLDQAEHYFAKGLKVAREQKAKSLELRLSLSMCDLYELRKNAGK
                     YLSQLGEVYAWFNEGFDSPDLLRAKARLENARLDV"
     gene            5781..6056
                     /locus_tag="VIT19_00285"
     CDS             5781..6056
                     /locus_tag="VIT19_00285"
                     /inference="COORDINATES: protein motif:HMM:NF012442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEY5837439.1"
                     /translation="MTKDELIYAVADKAQMTRIAAACAVEATFEVITSTLRDGGAVKI
                     TGFGQFRVTKLEERQGRNPQTGAPMKIGASRRPRFSPGKRLRDALNR"
     gene            7481..7729
                     /locus_tag="VIT19_00290"
     CDS             7481..7729
                     /locus_tag="VIT19_00290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837440.1"
                     /translation="MAATYLNYAAELIIKANDSEGKEQIGFLRSPPSGDRPLNESSRK
                     QQQDKREQVSPVNSHMTHTIRSTRKAAAAGGIRLSRNA"
     gene            complement(7839..8831)
                     /locus_tag="VIT19_00295"
     CDS             complement(7839..8831)
                     /locus_tag="VIT19_00295"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HEY5837441.1"
                     /translation="MHIEKRILVTGGAGFLGSHLCTRLLEVGHHVLCVDNFYSSSRSN
                     VEHLLDHRHFELIRHDVCFPLYVEVDEIYNLACPASPIHYQRDPVQTTKTSVIGAINM
                     LGLAKRLKARILQASTSEIYGDPTVHPQTEEYWGNVNTVGPRSCYDEGKRCAEALFFD
                     YLRQHDLPIKVARIFNTYGPRMHPNDGRVVSNFIIQALLGQDITVYGQGAQTRSFCYV
                     NDLVEGLIRLMASPESVTGPINLGNPEEFSILELANHVVQLANSRSRIVHRPLPQDDP
                     RQRCPDISKAEEILGWAPRTPLKEGLTLTLAYFEKLILNAKVRERIAGPVIQSN"
     gene            complement(9185..10144)
                     /locus_tag="VIT19_00300"
     CDS             complement(9185..10144)
                     /locus_tag="VIT19_00300"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY5837442.1"
                     /translation="MSSDNQMRVLITGATGFVGKHVIRALLELKDVEVIATTHRAKMT
                     GNPNDRLVALDVTDAEQTSAVIKAEQPTHLIHLAGVAGLADANRDARKTWEVNAQGAL
                     HVAFAIQQGAPRCRLLFCSSALVYGGSFCSGKPLSEDAPIDPLNLYAASKAAPDLFIG
                     QMAKEGLLAIRMRPFNHTGPGQGLDFVVPSFAAQIAAIERGEQESVIKVGNLTVRRDF
                     LDVRDVVDAYMRAIVRFDSLPNGAVFNIASGIATSVGEVLKSLIAMSCKKIDVVFDPA
                     RMRSDDVAVVVGDANAARKALHWAPKYAIADTLNDVLTYYRKV"
     gene            complement(10152..11132)
                     /gene="gmd"
                     /locus_tag="VIT19_00305"
     CDS             complement(10152..11132)
                     /gene="gmd"
                     /locus_tag="VIT19_00305"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017944086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008446 - GDP-mannose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEY5837443.1"
                     /translation="MKRAFITGVTGQDGAYLSQFLLLKGYEVTGLVRRSSSSDLMDAK
                     LRWLGIEKDVRLIDGNLTDLSSLVRIIREVKPDEIYNLAAQSFVRSSWNQPLLTANVT
                     AVGATNMLEAMRLEAPGARFYQASSSEMYGLVQEPVQTEATPFYPRSPYAVAKLYAHW
                     MTVNYRESYKLHTTSGILFNHESPLRGLEFVTRKVTHTVAQIKLGVAKKLALGNVSAK
                     RDWGHAKDYVAAMWLMLQQDEPEDFLIATGRTTTVEDMYKIAFKCVDLNPEDHVVIDK
                     QFLRPAEVELLLGNPAKAKAKLGWQAETSLETLIQEMVEADLMRVGAQMS"
     gene            complement(11513..11650)
                     /locus_tag="VIT19_00310"
     CDS             complement(11513..11650)
                     /locus_tag="VIT19_00310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837444.1"
                     /translation="MNPFMWLYRDRSSPFYSSDEATENEQPVLAHAVAAVFGSAGFDV
                     S"
     gene            12476..13615
                     /locus_tag="VIT19_00315"
     CDS             12476..13615
                     /locus_tag="VIT19_00315"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5837445.1"
                     /translation="MIRVLHTYKTFRPDATGGVAEVISMIVANLKGNFRHSILVGRER
                     GGDRSYSDEVLSVQAIGSFGLWSSMPIAPRYPKEMIRALKESDLVVHHAPFPLADLGL
                     LFRRRNGPKLIVHWHAEVVRSSLAVAAASILVNRSLQQASAIVVSDQCMIERSQLLGR
                     FAEKCVVIPYATDCRYWSELTEDECIQVRSLRSKYPDLIVTTGRLVPYKGHDVLLEAM
                     QNVQASLVVIGEGPLQNRLRAMAANLGLQSRVHFLGHQPKERLKLFLHAGKVFAFPST
                     TIAESFGIAQVEAMAAGLPIVNTNLATAVPRVARHELEALTVEPGDPTALASALSRLL
                     ANPTLAFRLGAAAKARARQEYDQQPFVTRIGKVYQDVMRRDAAGT"
     gene            complement(13612..>14097)
                     /locus_tag="VIT19_00320"
     CDS             complement(13612..>14097)
                     /locus_tag="VIT19_00320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837446.1"
                     /translation="YVILRPTLTYGPTVRGNMDRILRLSLMRVAPPLAGMRNRRSLLA
                     IENLCDAVEFGLTSVTALEQVYLVADAFPVSIAEIVENIRKGAGLRGKGLAIPPRLLS
                     VLVRSCGLGESWEKLGGDLVASVQKLRSHGFRWRIDTATALQRLGALSVGKAWTDDSR
                     S"
BASE COUNT         3189 a         4030 c         3917 g         2961 t
ORIGIN      
        1 gaacgtttcc tttcaactga tcttcgcctg cgcgccgggc gagcagcctt tggttatcgg
       61 tctcggtaca aaggggcaat atactgcgtt gatcgctccg cgttgtccct aaacaacccg
      121 catcaaaccg gtctgcaaaa gcctagaaaa gtcgcggcca agtacaggga gccaaatggc
      181 caaacttgga gcggccgcgg attaaaaccg ctttggctga catcgtttga gcgcgagacc
      241 tatttcacca ccagagttgc atgcgctgta atcaagaagc aaaccaacga ttggccaggc
      301 tttacgatct cgcatcgtca gattcggatg tcgccagcca gtcaaccaat gacggctccg
      361 gacggtctcg gtggatgctc gtagcgtcga agttcttcgg tccacttctg ggtaagatgc
      421 caatcaacaa tcggatggct cggagctaag agctgtaaag gcgaagagat caagatcgtc
      481 gcgaatccgt cgcaatgaat aactggttca aatccagaaa ggtagccgcg aggaatgggc
      541 cgtcccggcg ttcgccgcca catcaaatct cgtgctcgaa aagctctcgt gccgccctaa
      601 cctcatggcc aacgccccgc aggatttcca taccagcagc agcacatttc aggatttcca
      661 taccaagcag cagcacattc caggtgaaat cacgttgatc gttggtccat ctcgcgacac
      721 gactcggcag cggtaagacg tccgaaacat ctgaagcgta acggcgtcga aagtttcgtc
      781 cggggttgtt gtaaattgca aggtagcacc aagagccgat agcctttgga ttaggcactc
      841 cacagccggt gcttgaccga acggaatact tgcacgttga ggattgcttg gattcaacga
      901 catcgccctg ccgaccgcac ctgaccagat cacgcactga tcaaacactg cgccactaga
      961 catcctaacg gctcggatac tcattttgac ggagtactta accgctttat ggcattgggc
     1021 ctagggtcag cgctcactct ttggcttcgc taagctcgca cgaaacgctc acagcaaagg
     1081 ctgtgccctg cattaagcct gccaagcgcc cgccgctgcc gttccgttgg cttattttca
     1141 atgccgtcca attttgctac agttcagatg atcctagcgt cccgactcgc gagttggaac
     1201 aggattgggg cacgatcatg gacgttggcg gctggctgcg aaatctggac ctcggacagt
     1261 atgagtcatc attcatcgag aatgctgtcg acagcgatgt gctgccagag ttgaccgaag
     1321 gcgatcttga aaagctaggc gtgccgctgg gagacaggaa gcgtctgatc agggccatca
     1381 agactatggt tagcggccct gctggtgcgc tcatcaccag caaagcagaa aatgcgccgg
     1441 gcgatctctc catcatgaat gcgaccgaac gccgccactt gaccatgatg atctgcgacc
     1501 tggtagacgc gactgccctg tcagcgcgcc tcgatccaga ggatatgcgc gccgtaatgg
     1561 atgcctatca cgcggcctgc gcgcggatta ccctgtttta tgatggcttc ctcgcccatt
     1621 ttcgggacga ccgtatatcg gcatattttg gctatcccta cgcgcacgaa gacgatgcag
     1681 agcgaagcgt acgcgggggg ctcgatatcg ccgccgccgt tgcacgactt aaaacgccag
     1741 cggcagctcc gctctcggtc cgtattggca tcgcaaccgg cttggtgctg gttcgcagtt
     1801 tcgatggcga gggtccatta cgggaccatt cagttgtgga agaggcgccg aacacagcag
     1861 cccgccttca agccctggtc gcgccgggga cggtcgtcat cgcagcctct acacgcaggc
     1921 tgcttggcgc ccgcttccgc ctgcgcgatc ttggccgtca cgaggtcaag ggcattggcg
     1981 agccggtcgc ggcgtgggcg gttgacggca tcacggattc cggcagtcgt ttggaagcgg
     2041 tccgcgcagc gggtttaact gatcttaccg gccgcgaaaa cgagatcgaa ttccttctga
     2101 aacgccagcg cctcgcttgg aacggtgaag gccagatcgt gctgatcacg ggcgagccgg
     2161 ggatcggcaa gtcccgcctc gcggcggcac tcgaagatcg cctggctgac gagccgcaca
     2221 ccgtcttgcg ttaccaatgt tcgccttacc acaccaacag tgcgctttat ccgttcatct
     2281 cgcaattggc acgagcggcg cggttcaagg cccacgatac cgcggagcaa cgcctcgaca
     2341 agctggaagc gcttctcgcc attgcttcac caagtggtca ggacacagca tcgatttttg
     2401 cggagctgct gtcgattccg tttgacgacc ggtatccaaa actggtgcac aatcccgtac
     2461 agcaacgccg ccgcacgttc gcggcgttgc tcgatcaatt cgagaatctc tcgcggcaga
     2521 agccgatcct gctcttgttc gaagatgcac actgggccga tgccacctct ctcgagctac
     2581 tcaatctgac agtcgaacgg atccgctatt taccggtcct tgccttgttc accttccgac
     2641 ctgaatacga gccgccctgg attggtcttc gcaatgtcgg cacgttgacg ctcgatcgcc
     2701 tcgaccgcag cagcgttgaa agcatagtca cacacgtggc gggcggccgt gtattgccag
     2761 cccaggttat gaagcagatt gtcgaccaga ccgacggcaa cccgttgttc gttgaggagc
     2821 tgaccaaggc gttgcttgaa ggggatatcc tgatcaaggg cgtcgacggc taccgagtca
     2881 atgagccgct gcccccactc gccattccag cgacccttca agactccttg atggcgcggc
     2941 tcgaccgcat gggcgccgta aaggaaatca gtcaaatcgg ggcagctatc ggacgtgagt
     3001 tctcctattc gttaatgcgc gagttggtgc gaggcgatga aaccgtacta aagggtgggc
     3061 tcggcaaact cgagcaggct gagctcgttt tccgccgcgg tgagcctccg gaggctatct
     3121 atactttcaa gcacgcgctg gtacgggatg ccgcatatga gagcctgctc aagagccgcc
     3181 ggcaccaatt gcatggccag attgggcgcg ccatggagga gaagtttgcc gacattgtgg
     3241 tgagccaacc ggaaatcctt gctcatcact ttactgaagc cggtcttgtt gaccccgcaa
     3301 tcgagtactg gctcaaagct ggtaatctcg cgctgcgtcg ctcagcgaac gctgctgtcg
     3361 agcatctgaa acaagggttg aaattgctcc ccaatgttga cgacccgatg ctacgcaaca
     3421 agtccgaatt gctgcttcaa acgtcgcttg gcaattccct gcgggagatt gagggctgga
     3481 gcacacacaa tgtgaagcac gcgtatacgc gagcaataca actgtgcaaa gagaacaagc
     3541 tcgaaaaata ttcctctccc gcagtgtttg gtttgtggac ctggaacttc ctgcgtgcaa
     3601 cgcttggtga agcgcaagcc ctcgccgaac atttgctgaa tatcgcggag aatgtaggcg
     3661 actcggtgta cagggttctt gcccaccagg ccttaggatt taccttattt ggacaaggga
     3721 aatttgcggc cgcccacatc gagctagaac gcagcatggt cttgtgtcag gacggcgagg
     3781 ctacggctta tcttgagctg tcagcgcagg acccgcgatc tcatgtaaga tcatacgatg
     3841 ccatgacact ttggtttctc ggctttcctg atcaagcctt gctgcgttct accgaggcct
     3901 gccattatgc agatacatct cgacatccgt tcagtgaggc aatggcacga accataaacc
     3961 tccgagtaca tcagtttcgt ggcgaggctg gcgctgttgc aggccaagct aacgcggcaa
     4021 tcgcattctg cgaggagcat gactttgtgc actatttagc catggccttg atattgcgtg
     4081 gatgggcaag ggccaaggaa ggcgagtttg aggaaggtat ttccgagatt caagaaggtt
     4141 tgaaaaagga acgggccacg ggcgccttgt tatttgagtc gtactctctc gcgctaatgg
     4201 cggatgcatg cataaagaat gaccggtacg ggcaagcgct cgaggctttg aagcaggcgc
     4261 aattaaggct agaagaagag agctccggat gcttttacga ggcagaaata tatcgtttgt
     4321 tcggggaaac gcatctgcga tcgaaccaaa atctagatca ggcggaacat tattttgcta
     4381 aaggccttaa ggtcgcgcgc gaacagaaag ccaaatcact tgaacttaga cttagtctca
     4441 gcatgtgtga cttgtacgag ctgcgaaaaa atgccggcaa gtatctttca caactcggcg
     4501 aggtctacgc atggttcaat gaaggttttg acagtccgga tcttctcaga gccaaagcca
     4561 ggttagagaa cgctcgatta gatgtttaag tctcactccg atcatgctgc tgaatgcggc
     4621 ccgtccagcc agcgcgcaag cttggctctc cagtcgacgg aaactcttca ttaatccatc
     4681 cggcgtagac cgcaggcgtg cggtcgagat cgacaccgcg cgggtcgacg ctgggggcca
     4741 gatgaacttt ccgcgctcca gccgtttggc atagagcgac atgccggtcg tgccagagaa
     4801 tcttgatcag cttgcagctc ctgccgcgga acgccgccgc ccgcatgaaa gcgcagcaac
     4861 ggccgacgtc agtgtcgccg ggtcggctgc gccggcaatc cggatccccg cccggctccc
     4921 aactcgatct cgacgatagt tccaggaccg atgaggccgg caggtccgtc cggcgcgatc
     4981 cgcactggcg cgaggctcat tggcggctgc gcccgcagtt ggcgaggccg ggccgtacaa
     5041 ctggctggcg tggattccgg ccgcgggcgt ccccgatcac aaactgccta gcggctgccc
     5101 gtgccgcggc accgccttcg atcaatgggg cttaacgacg caactcgctg accgagatct
     5161 gaacattaca tcagccgttc ctgaaccggc ctgggcttct taggaccccc gtctttgtga
     5221 aggatgatgc ggcccataca acgattgacg tactctcgtc gtttcagaaa ttttacgcca
     5281 ggatgttgct tccgggcctg tgccttgcaa ctgacttctc gttgagcaag gatttgatcc
     5341 cgtttggaat ttgcagcctg agctgcttcc gaaaatacga aaattgctac caatacggcc
     5401 agaacgattc tcacgcgact attcccctct aggccccaat acgaaggcat gacgatgcgc
     5461 cgtctgcttc gatgcatctt agcatagata ctctgtccac atagttctcg gatacgtaag
     5521 gggcgttttc gcttgtcggg gtggtcagac ccccgacctc ccctggaaac gtgcagagcc
     5581 tggtgaattt ccctggcacc gccgctgaaa ctttcacagc gaacgtgtcg cagtaaatat
     5641 gcgcggggtg catcttccct ggcgccaatc tcgtcagttc tgaaacttga ccacccaatt
     5701 gtgcaattgc ggcggtttcg gcaaactcgt cgtctccgcg tgcaacggca aaatgcccga
     5761 tgcagaaaag gatcggtcgg atgactaagg acgagctcat ttatgcagtg gccgacaagg
     5821 cgcaaatgac gagaatcgct gcagcttgcg ccgtcgaagc aacctttgaa gtcatcacat
     5881 caacgttgag ggacggcggc gcagttaaga tcacgggctt cggtcaattc cgggtaacca
     5941 agctagaaga gcgccaggga cgaaatccgc aaaccggcgc cccgatgaag atcggggcga
     6001 gcaggcgtcc gcgcttctcg ccgggcaaga ggctcaggga cgctttgaac agatgacgcc
     6061 gcgcgaaaga gcattgggct attgggcatg attgacgact tggaaacaat cgcaagcgct
     6121 ttagtgaggt cggcagtgaa gcggcgcaag ggttaggttg gtccagcttc accgttaact
     6181 ggtctccaac gtagcactac tcggctccgt gtcgtgcgtg tgccggttgg cttatgtgca
     6241 ctgaagcgct cgctcggatc ggcgcggcgg tgatttctaa ctgatcccgg gcgccggtct
     6301 cttctcgcgg acgcggccgg ggcagcggga cgacggcagg cgttccgatc gtgagtcgcg
     6361 accttggctg tgggatcgga cccccgaccg tcgctggctc ggtttcggtc ctacctgatt
     6421 ggcgcgtggt gcctggcggt ggcggatcgg gaagaaccgg ggcggccgcc agtatagcac
     6481 ttgaggattg gggtgtgggg gacgcactgg agatcgaagg ctccttcgca gatgcttcga
     6541 cctgcaagtc cacttgcacg gggagcggag gggcgaccag atgctccagt ctggggatga
     6601 tggtgggcgg cgtcacgtat tgccggatga accaagtaac accagcggcg caccccagga
     6661 ccggcaagct cacggctaaa gcggaaatca accgtcgagc agacttgcgt ccgacgaagg
     6721 gcagattgcc ttcaaggtcc atatcggctc ctcccggggc tccggttcaa taagccgcat
     6781 gataatcgaa ttccaggcgg caatcctccg aatccgccgg gggtgcctcc gaacgcaaaa
     6841 cggccttttt gtgatggcca gcacatcggc tccgacaggg cctccgtagg atcttccacg
     6901 gacaatggct cagggaggct caaatactca aaacagtcgg ctacgctttc gcagtttgcc
     6961 tcgtcgccac cgtggccatc ggctggtcgc aaaaacaaag cccagcacag cagcctgttc
     7021 accccttgag acgatttcgc ccgaaaagct cacggtgggc catagcgcgc tttccgagtt
     7081 gaagttcacc gacatgtcgt tcgtattcac agacgccaat tgacgacatc ccgattgcct
     7141 ccggtcctgg gtgcacttta ctcagcccct agcatccaag gccgaacggc agttaattca
     7201 ggcggagcaa gccatatgtc ggaccaacaa atctgcgaac actgcgcggg tccaacgaat
     7261 gtcgctactg aaatccaacc ttttggcagc gatcctggcc accgcatctt ttattgcgac
     7321 gcttgcaagc gtctcacctg gaccacgtgg cgtgtcgctc aacataagcc gacgcaccac
     7381 gggccgaatc ggccagacgg ctaggcatcc gcgctatgcc agttgacgcc acgggagggc
     7441 tcccatggtc ctccgagggg atttgacgaa gcccaccacg atggcagcta cttacctaaa
     7501 ttatgccgcc gagctgatta tcaaagccaa cgacagcgaa ggcaaagagc aaatcggctt
     7561 tttgcgttcg ccgccaagtg gtgacaggcc gctgaacgag agctcgagaa agcaacagca
     7621 agacaaaaga gaacaagtaa gtcctgtgaa tagtcacatg actcacacga tcagatccac
     7681 tcgcaaggcg gctgctgccg gagggatacg gttgtcgcgt aatgcatagc ggtcggccct
     7741 cctcaacccg accgcccatg agtcacagaa aaactgattg gtaatcccgt tgcctctacg
     7801 gggccaaatc cggccgcacg gattaattga agacagccct agttggactg aatcacaggc
     7861 cctgcaatcc gttcccgaac tttggcatta agaatcaatt tttcgaaata agctaaagtt
     7921 agcgtcaatc cttccttaag cggggtccgc ggtgcccagc ccagtatttc ttcagctttg
     7981 gaaatatcag gacaacgctg tcgcgggtcg tcctgcggaa gcggccggtg cacgatacgg
     8041 gatcgcgagt tcgccagttg aacaacgtga ttggccaatt ccagtatgga aaattcctcc
     8101 ggattcccga ggttaatcgg tccggtcacc gattcagggg aagccatcag ccgaattaag
     8161 ccctcgacca gatcgttcac ataacaaaag gaccgagtct gcgccccttg gccgtataca
     8221 gtaatgtcct ggccaaggag ggcttggatg atgaagtttg acaccacccg gccgtcattg
     8281 gggtgcatac gcggcccgta ggtgttgaag atccgagcca ccttgatagg caagtcatgc
     8341 tgccgcaaat agtcaaaaaa tagtgcctcc gcgcagcgct ttccttcatc gtagcaagag
     8401 cgcgggccga ccgtgttgac atttccccaa tactcttcgg tctgcggatg aacggtagga
     8461 tcgccataaa tctccgaggt ggaagcctgg agaattcgag ccttcagccg cttggccaag
     8521 cccagcatgt tgatggcgcc gatcacactg gtcttcgtcg tctgcaccgg atcgcgctga
     8581 taatgaatcg gagacgcggg gcacgccaag ttgtatatct cgtcgacctc cacataaagc
     8641 ggaaaacaaa cgtcgtggcg gatcagttca aaatgtcgat gatctagcag atgctcgaca
     8701 ttgctgcgag agcttgaata aaaattgtcg acgcagagaa cgtggtgacc aacctccaat
     8761 agacgcgtac acaaatgcga gcctaggaag ccggcgcctc cggtgaccag aatacgcttc
     8821 tcgatgtgca ctacgaataa tccccgacgc tgatagccgc tagcctagcc cgaataattc
     8881 atgacggcag gatttttggg ccacggatgt agcggaagcc gcgactcacc gcatgattct
     8941 ggtgttgagc ctcatcaaac gagcgatcga ggagcgccac gcccgtcatg caacaggatg
     9001 gcttcctctc cttcgacttg ccagcagttg cgctgatcga acccgcgaac gtcatacacg
     9061 accggcagcc atcgaacgtc aagatgacta tccggataga tggcaagaat gagccttcag
     9121 cacagcgtga aacgctattg agacaccaaa cctgtgcaaa tcgcggtggc atcccaaacc
     9181 tcagctaaac tttgcgataa taggtcagaa cgtcgttcag ggtgtccgcg atcgcatatt
     9241 tcggcgccca gtgtagcgct ttccgagctg cattagcgtc gccaacaacc acagcgacat
     9301 catcagaacg catccgcgct gggtcgaaaa ccacgtcgat tttcttgcag gacatcgcta
     9361 tcaagctctt caggacctct cccactgacg tagcaatacc agacgctatg ttgaagactg
     9421 caccgtttgg caaactatca aaacgtacga tggctcgcat gtaggcgtcc actacgtcgc
     9481 ggacatcaag aaaatctcgg cgcactgtta agtttcctac ttttatcacc gactcctgct
     9541 cgccgcgctc gattgctgcg atttgtgccg caaatgaggg tacgacgaag tctaatcctt
     9601 gaccgggtcc ggtatgattg aatgggcgca tccggatagc gagcagccct tcttttgcca
     9661 tctgtccgat aaaaagatca ggggctgcct tgctagcggc ataaagatta agcggatcaa
     9721 tcggcgcgtc ttcactcaat ggcttccccg aacaaaagct tccgccgtac accagtgcac
     9781 tgctgcaaaa caataaccga catcgtggcg cgccctgctg aatggcaaat gcgacgtgga
     9841 gggccccttg ggcgttcacc tcccacgtct tccttgcatc gcgattggcg tcagctaatc
     9901 ccgctacccc cgcgagatgt attagatggg taggctgctc agcctttatg acggcagacg
     9961 tctgctccgc atcggtcaca tctaatgcga caaggcggtc atttggatta ccagtcattt
    10021 tggcgcgatg ggtcgtggca ataacctcca cgtccttcaa ttccaaaagc gcgcgaatca
    10081 catgtttacc aacgaagcca gtcgcgccgg ttattaggac acgcatctgg ttatctgagg
    10141 acatccaagc gctaactcat ctgagccccg acgcgcataa gatcggcttc caccatttct
    10201 tgtattaggg tctccagcga ggtctcagct tgccatccaa gtttagcttt tgccttcgcc
    10261 ggatttccaa gcaacaattc aacttcggct gggcggagga attgtttatc gatgacaacg
    10321 tgatcctcgg gatttaaatc cacgcatttg aacgcaatct tgtacatatc ttcgacggtg
    10381 gtcgttcgtc cggtcgcaat aagaaagtcc tcaggttcat cctgctgcag catcagccac
    10441 atcgccgcga cataatcctt ggcgtgcccc caatcgcgtt tagcggacac gttgccaaga
    10501 gcgagtttct tggcaacgcc aagcttaatc tgagcgactg tgtgagtaac cttacgcgta
    10561 acaaattcca gaccgcgcaa aggcgactca tgattaaaca aaatcccgct cgtcgtgtgc
    10621 agtttatagc tttcgcggta attaactgtc atccaatggg cgtagagttt tgctaccgcg
    10681 tacggtgagc gcggataaaa gggggttgcc tcggtttgca ccggttcttg cacaagccca
    10741 tacatttcgg acgacgacgc ttggtaaaag cgcgccccgg gcgcttccag ccgcatcgct
    10801 tcgagcatat ttgtggcacc gaccgcggtg acgttggcgg tcagtaaggg ctgattccac
    10861 gaggatctaa cgaacgattg ggccgcaagg ttatagattt catccggctt tacctctcga
    10921 atgatcctga ccagcgaaga gaggtcggtt agattcccgt cgatcaggcg cacatctttt
    10981 tcgataccca gccaacgcag tttggcgtcc attagatcgc tggaactgct tcggcgaacc
    11041 aatccggtga cctcgtaccc tttaagaagc aaaaattgcg acaggtaggc cccatcttgc
    11101 ccggtcacgc ccgtgataaa tgcccgtttc acaccccacc tcaagttaac gcggaaggct
    11161 caacctgccg ggctatggcg ctgaaggcaa caataaaatc aacccagtag ggcggtaaac
    11221 gatcagcagc gcagcggcgg gcataggtca gggcggcggc agaccgaatt attcgatagg
    11281 ttgcatgagc aactccatca atcgaagctc agcacgcccg atttcgagcg cttagcgcgc
    11341 acgccatgcc tccttggcgt cctccggcat caaggccttg agttcgcacg cggccgcagc
    11401 ggtcgcatga atccgaggtc gaagaccgcg gcatcgaccc atttgtagat cggcagcaag
    11461 agctgcgccc aactcgacgg tatgtagcgg tagaagacgc cggagagaaa attcacgaca
    11521 cgtcgaaacc cgcgcttccg aaaaccgccg ccaccgcgtg cgcaagcacc ggttgctcgt
    11581 tctcggtcgc ctcgtccgag ctgtagaacg gcgacgaccg atcgcgatac agccacatga
    11641 agggattcat caggttcgca tcgaacgcag cgaaccgtcc gccaggacgc agcgcgggaa
    11701 aacctcgccg cgcaaccggg gcgggccgac tgcgtcggcc tcgagatcag cccgaaattc
    11761 ggccgccgca ccggacatcg agttcctcga aggcgatgtc gagcgtggtt gcggagagga
    11821 catggcgccg gccatcgctt ctccggggcc caatccgacg cgcgttctgt ccgaaggtcc
    11881 aggcctgatg ctgattcttt ctgtgcacgt cgttggccat cgcgccggcc agagtgacga
    11941 accgtggtcg acaggaacca gccgtgcgga acgaccaaaa tcaaggatcg cggacaaact
    12001 cgtccccgcc tctgcccgaa gaacgccggt gcccgggtca gcggctattg aacggagaga
    12061 accagttgcc aaaggtcgtt ttccaaaacg gaatcgaggt cacggaagat cggctcacca
    12121 cgccgcctga tcaacctcgt cacccaaaat cccgcatagc tggaagcgtc atgccgtcag
    12181 ccacggctcg ctgcaagacc cctggtgaca gtcgatcaat cggggaggct ggttcacgct
    12241 ttagcaggcc gctgacagca gcctgttagg ggctcataac tggctgttca gcggtgggga
    12301 catcgttggt ttcagcgtgt attcaaacat gagtacccta cccttttgga tattcagtct
    12361 acagtgccac aatcccagta tgagaattcc gggccacaat ctggtccgca gtagctgatc
    12421 aagttcttgt tgaatctgca tcttcggctt tcgcagccta ggacggttac ttctgatgat
    12481 ccgcgtgctg cacacataca agacattcag gccggatgct accggcggtg ttgccgaggt
    12541 catttcgatg attgtggcga atctgaaggg caactttcgc cattctattt tggtagggcg
    12601 agaacgaggg ggcgaccgga gctattctga tgaagtccta tcggtgcagg cgatcgggtc
    12661 gttcggccta tggtcgtcga tgccaatcgc cccgcgttat ccgaaagaaa tgatacgcgc
    12721 gctgaaagag tccgatctcg ttgtccacca cgcgcctttc ccattagctg atttgggttt
    12781 gctgtttcgt cgccgtaatg gccctaaatt gattgtgcat tggcacgcgg aggttgtgcg
    12841 gtcaagcttg gctgtggcag cagcatccat tctcgtcaat cgcagtttgc agcaggcaag
    12901 cgcaatcgtc gtttccgacc agtgcatgat cgagcgctcc cagcttttag gccgatttgc
    12961 tgagaaatgc gtcgtcatac cttacgcaac agactgtcga tactggagcg aactgaccga
    13021 ggacgaatgc atacaggtcc gatcacttcg cagcaaatat cccgacttga ttgtcaccac
    13081 ggggagactt gtaccataca aagggcacga cgtgctgctt gaagcgatgc aaaacgtgca
    13141 agcttccttg gtcgtaattg gcgagggacc tctgcaaaac aggctgcgtg ccatggccgc
    13201 taatctgggt ctgcagtcac gcgttcactt cttggggcat cagccgaagg agaggttgaa
    13261 actgttcctg catgccggca aggtttttgc ctttccttct accacaatag ccgagtcgtt
    13321 tggtatagca caggttgaag cgatggctgc cggacttccc atagtgaata ccaacctcgc
    13381 aacagcggtt ccccgcgtgg cgcggcacga attagaggct cttacagtag aaccgggaga
    13441 tcccaccgct ctggcgagcg cgctctcacg tctgctcgca aatcctactc ttgcattccg
    13501 gctgggagca gccgccaaag cacgagcccg tcaagaatat gaccagcagc cgtttgtaac
    13561 tagaattggc aaagtctacc aggacgtgat gcgccgcgac gcagccggca cctaggatcg
    13621 gctgtcgtcg gtccacgctt tacccacaga aagcgctccg aggcgttgca atgcggtggc
    13681 tgtatcgatg cgccatcgaa aaccgtgcga ccgaagtttt tgaacggaag ccaccaaatc
    13741 gccgccaagc ttctcccagc tttcaccaag accgcacgac cgcacgagga ccgacaagag
    13801 ccttggcggg attgctagac ccttgcccct gaggcccgcg cctttgcgaa tattttcgac
    13861 aatttcagcg attgaaacag gaaaggcgtc agcaaccaag taaacctgtt ctaacgctgt
    13921 aaccgaagta agcccgaact cgacggcgtc acaaagattt tcgatggcca gaagggaacg
    13981 gcgatttctc attcctgcaa gtggtggcgc gacacgcatc agtgagaggc gcagaatacg
    14041 atccatattg ccgcgaacag tcggaccgta ggtcagtgtg ggccgcagaa tgacgta
//
LOCUS       DATDBY010000015         3212 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1404929, whole genome shotgun sequence.
ACCESSION   DATDBY010000015 DATDBY010000000
VERSION     DATDBY010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3212
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1404929"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..360)
                     /locus_tag="VIT19_00325"
     CDS             complement(<1..360)
                     /locus_tag="VIT19_00325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837447.1"
                     /translation="MNPRIIFKVASLLLLLTGPLALTLSSDAQQYDQTARCDIAFPLP
                     RPSEVGTKAFQKTLYAFLEKRCYQNWVTDREIRNTGPFIMGKSFGTHNAVKIFYSPEA
                     WDWLKKRNREGEIADGAV"
     gene            656..1357
                     /locus_tag="VIT19_00330"
     CDS             656..1357
                     /locus_tag="VIT19_00330"
                     /inference="COORDINATES: protein motif:HMM:NF016704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEY5837448.1"
                     /translation="MDYTLLIGQLSGHLASILTMVAYLLRDILWLRFLTILSCFAGIL
                     FNYVVPATPLWTVIWWNVLFAIINVVQIAIIIRERTGIDFTEEEKELHDTLFKNFAPF
                     EFMKLMRIAHWRQIAPGDILAVEEQPLDEVMMIYNGRLSVERGGKVFAELLDGNFIGE
                     VSFISGGAATATVRAVEPTRYLAWSKKEIDGLLSRNPTMRLAMQALLSSDLSRKLARR
                     KPSFEAKIPVTLAGD"
     gene            complement(1354..1614)
                     /locus_tag="VIT19_00335"
     CDS             complement(1354..1614)
                     /locus_tag="VIT19_00335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837449.1"
                     /translation="MKGIPTVLITVSPEVSAQMRPPRALYPKGFKIGNSLGRPGMRDL
                     QKKVLRDALDLLTQNTRPGEAVTIEYPDYGEQYEPPRVKKIG"
     gene            complement(1663..2088)
                     /locus_tag="VIT19_00340"
     CDS             complement(1663..2088)
                     /locus_tag="VIT19_00340"
                     /inference="COORDINATES: protein motif:HMM:NF019003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase
                     selenoprotein B family protein"
                     /protein_id="HEY5837450.1"
                     /translation="MTLSRKCVPFTPFERELSKTTIAIVTAGGVHLKDQDGFNIADEL
                     GDLTYREIPPDVNSADLMVTHHHYDHRDADEDINVVFPIDVLRDLHAEGFIGGIAKKH
                     IGYMGYTMQLKAMYEGTAREIANDIDKNSRADAVILTGG"
     gene            2402..2935
                     /locus_tag="VIT19_00345"
     CDS             2402..2935
                     /locus_tag="VIT19_00345"
                     /inference="COORDINATES: protein motif:HMM:NF020348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding beta-barrel domain-containing
                     protein"
                     /protein_id="HEY5837451.1"
                     /translation="MRRAVLFLFLVPLLAVGQEPAKKPDVWSPLKYFLGNWHGTGKGE
                     AGVSQLEREYQSILNGKYIQIKHKSVYAPQEKNPKGETHEEIGFISFARGPKAFMMRQ
                     FHVEGFVIHYKAETISDDGKLMVFSSETIENIPAGWRAKETYRIVNENEFTETFELAE
                     PGKDFHVYTTNHFKRKK"
BASE COUNT          735 a          867 c          877 g          733 t
ORIGIN      
        1 aaccgcgccg tcggcaatct cgccctcgcg atttctcttt ttgagccagt cccacgcttc
       61 cggcgaataa aaaatcttga ctgcgttatg cgtgccgaaa gacttgccca tgataaacgg
      121 gccggtatta cggatttcgc gatcagtcac ccagttttgg tagcaacgct tttcaagaaa
      181 cgcatagaga gtcttctgaa aagccttcgt gccgacctcg ctcgggcgcg gcaaaggaaa
      241 agcgatatcg cacctggcgg tctgatcgta ctgttgagcg tcgctcgaca gagtaagcgc
      301 gagcgggccg gtcaacagca acagcaggga cgcgacttta aagatgatgc gggggttcat
      361 agatgtctcc gcagtgagcg gcgtacatac taaattagtt tacgctgaac cggaaagagt
      421 ttttggcaat cgttcggact ctaccattca caccgtggct ttagcccggt ggaacgtagg
      481 ggctatgcaa gcggaaaccg tttcaaacgg tttccatgcg cgggtcgcca acggatcgcc
      541 gcgctaaagc gacggcgtga ctgagaaccc tttcaaactg ggcttgcgcg tcaaaactct
      601 gaatggcaag atgcgaatgt tcagatcgcg ggcgtgaact ggcgcccatc gacggatgga
      661 ttacaccctc ttaatcggtc aactctcagg gcatctcgct tccatcctga cgatggtcgc
      721 gtatctgctg cgagacattc tctggctgcg cttcctcacg atcctgtcct gctttgccgg
      781 catccttttc aactatgtcg tgcccgcgac gcctttgtgg acagtgattt ggtggaacgt
      841 gctcttcgcc atcattaacg ttgtccagat cgccatcatc atccgcgaac gtaccggcat
      901 cgacttcact gaagaagaaa aggaactgca cgacacgctt ttcaagaatt tcgcgccgtt
      961 tgagttcatg aagttgatgc gcatcgcgca ctggcggcag atcgcgcccg gcgacatcct
     1021 ggccgttgaa gaacagccgc ttgatgaagt catgatgatt tacaacgggc ggctttccgt
     1081 cgaacggggt ggcaaagtat ttgcggagtt gctggatggc aacttcatcg gcgaagtgag
     1141 tttcatcagc ggcggcgccg ccacggcgac cgtgcgcgcc gttgagccaa cgcgttacct
     1201 tgcctggtca aagaaagaga tcgacgggct cctgagtcgg aatccgacca tgcggctggc
     1261 catgcaggcg ttgttgagca gcgatttaag caggaaatta gcgcggcgta agccgtcgtt
     1321 tgaagcaaag atcccggtga ctctggccgg agattagcca atcttcttca cgcgcggcgg
     1381 ttcgtactgt tcgccgtagt ccgggtattc aatcgtcact gcctcaccgg gtcgcgtgtt
     1441 ctgcgtcagt agatcaagag cgtcgcgcag aactttcttc tgcaaatcac gcatgcccgg
     1501 acggcccagg ctgttgccga tcttaaatcc cttcggataa agcgcgcgcg gcggacgcat
     1561 ctgcgctgac acttccgggc tgacggtaat caagaccgtc ggaatcccct tcatttcaat
     1621 ttcacgttgg accgcaacga ccgtgcggtg acagacgctc ggtcaaccac cggtgagaat
     1681 taccgcatcc gcgcgcgagt tcttgtcgat gtcattggca atttcacgcg cggtcccttc
     1741 gtacatcgct ttgagctgca tcgtgtagcc catgtagccg atgtgctttt tggcgatgcc
     1801 accgatgaaa ccctccgcat gcaggtcgcg cagcacgtcg atcggaaaga cgacgttgat
     1861 gtcttcgtcg gcgtcgcgat gatcatagtg atgatgcgtg accatcaggt ccgcggaatt
     1921 aacgtcgggt ggaatttcgc gatacgttag gtcgccaagt tcgtcggcga tgttgaaccc
     1981 gtcctgatcc ttgaggtgca caccaccggc ggtaacgatc gcaatggtgg tcttcgaaag
     2041 ctcacgttcg aagggagtga acggaacgca tttgcgagag agtgtcataa aacagatgtc
     2101 agaagtcaga tatcagatgt cagactagca aatctattga ctcgtcccta acggccgtaa
     2161 cttcaggtgc tctaatttca gctttattcg gcgtgatctc tgctctgcga ctctgcggtg
     2221 aagcgcttga gaattccgtc accgccgaga cgcagagaac gcggaggtgt cgcagagagc
     2281 ttcaaaacga ggcaccaccc aatttcatga cacctctgaa tcgccggcgg gtcagcgtct
     2341 ccaaaaactg gatcgacact tcaaacgtgc atgttaagct ctcggtttgg agattaagcc
     2401 aatgcgaaga gcagttctgt ttctctttct cgttcctttg ctcgcggtag gtcaggagcc
     2461 ggctaagaag ccagatgtct ggagtccgct caaatacttt ctcggaaact ggcacggcac
     2521 cggcaagggc gaggcgggtg tctcgcagct agaaagagaa tatcaatcaa tcctgaacgg
     2581 caaatacatt caaatcaaac acaagtccgt ctatgcgcca caggaaaaga acccgaaagg
     2641 cgagacgcat gaggaaatcg gtttcatcag cttcgcgcgc ggcccaaagg ctttcatgat
     2701 gaggcaattc cacgtggaag gcttcgtgat tcattacaaa gctgaaacta tttctgatga
     2761 tggcaagctg atggtgtttt cttcagagac gatcgagaac attccggcgg gctggcgcgc
     2821 caaagagact taccggattg tgaatgagaa tgaatttact gagaccttcg aactcgccga
     2881 gccgggaaaa gactttcacg tctacacgac aaaccacttc aagcgtaaga agtaaccgcc
     2941 ctcgtggatc gcgctttcat tcacacccgg gtcagccggg tgatcaggct gtcatggcca
     3001 gcttacaaag aaatgccaga tgccgaactt gcgtccgaca tctgacatca tctctgacct
     3061 ctgtttctta cagcttccgc aagacctcaa acaactcttc gttgtccggc tgatcggaaa
     3121 tgtcgtgaat gtctacgtgg gcgaacttgc cttccttgtc gacgatgaat atcgcgcgct
     3181 cggaaatgcc gtcgctcgcg cggtacgcgc cg
//
LOCUS       DATDBY010000016         2664 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2638494, whole genome shotgun sequence.
ACCESSION   DATDBY010000016 DATDBY010000000
VERSION     DATDBY010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2638494"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1974)
                     /locus_tag="VIT19_00350"
     CDS             complement(<1..1974)
                     /locus_tag="VIT19_00350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837452.1"
                     /translation="MKTKLRSLRALPGLTAALLLTTSAVVAQPAPTPTQSPEATNTST
                     KTTTKASKPAKTESVPTSATTGEDAGDYTVTSTLEFGYRGIRVGGDVNKFKSDLNYKA
                     GPRLFDSSLLVQAKNGKGGFFDSLLVTSTGWGADPSGNVRIRMEKPQAYRFDGNYRRF
                     KYYRVLNNIVNPVWSFGLQPNPVSGFHSYNTRTQMGDFDLTILPKNETISFNIGYSPE
                     RYTGPFFTTYSAGGNQFQLLANARSRANDFRVGAEGKLGPIDWTFLQGFRRFQDDTFT
                     DTVPFAINPASTAARLTSYTRTEPSKGSVDFTRASLHSLIAKKLDLTARIVYSKAESS
                     FAFIENFTGVNWNPRVTGWPPTAIPRVPGPGTVTVAATPNTLNQGRYNITGSAERPSI
                     LFDFGATFFATDNFRLSNTFRVEDWDITGTAVFADFFSITRNLPATAGGGTRTDTVGF
                     SNLDATEITRYRKYQNTFEGDYQFSNRLGIHFGYRYGKREIERFFDGFNLGSQGSLTP
                     PNARSTHEESFDNTTHAFFAGFKARPAKEWTVYLDVEHGTADNAFTRIGNYDYTNFRA
                     KSRYVPNRKVILNLGMIVRNNANPSEIAGVTLENFGVSFKTRIFTSSLDIVPNSRFML
                     NMGYNYNWVNSEALIDYSYLSSTNSAIRGTSLYY"
     gene            complement(2065..>2664)
                     /locus_tag="VIT19_00355"
     CDS             complement(2065..>2664)
                     /locus_tag="VIT19_00355"
                     /inference="COORDINATES: protein motif:HMM:NF021235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEY5837453.1"
                     /translation="HWRNDIGCTDCHSSHSNVTGRNVASSNQFVTTPNAEKPGFATIA
                     MLKANDPQLCIGCHSEVKPAFNMPFHHKVLEGAMRCSDCHNPHGGFELKQTRLATGAD
                     AACIKCHADKQGPFTYEHAPIKTEGCQACHTPHGSANPRLLQYSAINQLCLTCHSVDH
                     GVGALEPVGPTHNQNQQYRDCTTCHVKIHGSRSSPVFFR"
BASE COUNT          543 a          734 c          780 g          607 t
ORIGIN      
        1 gtagtacaac gaggttccgc gaatggccga gttcgtcgag ctgaggtacg agtagtcgat
       61 cagcgcttcg ctgttgaccc agttgtagtt gtaacccatg ttcaacataa agcgagagtt
      121 gggcacgatg tctaatgacg acgtgaaaat cctcgtcttg aacgagacgc caaagttctc
      181 gagcgttacc ccggcaatct ctgacgggtt cgcgttgttc ctcacaatca ttcccaggtt
      241 caggattact tttcggttcg gtacatagcg gctcttcgca cggaagttcg tgtagtcgta
      301 attgccgatg cgcgtaaacg cgttgtcggc cgttccgtgt tcgacgtcaa ggtaaaccgt
      361 ccactccttt gcggggcgcg ctttgaatcc agcgaagaaa gcgtgcgtgg tgttgtcaaa
      421 agattcctcg tgggtgctgc gagcgttcgg cggggtcagc gacccctgcg accccagatt
      481 aaagccgtca aagaaccgct cgatttcgcg tttgccgtag cgatatccaa aatggattcc
      541 aagccgatta ctgaactgat agtcgccttc gaaggtgttc tggtatttgc ggtatcgcgt
      601 gatctcggtc gcgtcgagat tgctgaaacc aaccgtgtcc gtgcgcgtgc cgccgccggc
      661 agtcgccggc agattgcgcg tgatcgaaaa gaagtctgcg aaaacagcgg tgccggtaat
      721 gtcccagtct tccactcgaa acgtgttcga caacctgaag ttatcggtgg caaaaaacgt
      781 ggccccaaaa tcaaacagga tgcttgggcg ttccgccgag ccggtgatgt tgtatcgacc
      841 ctggttcaaa gtgttcggcg tcgccgcgac ggtcacggta cccggacccg ggaccctcgg
      901 aattgcagtc ggaggccagc cggtgacgcg cggattccaa ttaacgccgg taaagttctc
      961 gatgaaggca aagctggact cggccttgct gtaaacgatc cgcgcggtaa ggtcgagctt
     1021 cttcgcaatc agcgagtgca gactggcgcg agtgaagtca acacttcctt tggacggctc
     1081 ggttcgggtg tagcttgtca gacgggccgc cgtactcgcg ggattgatcg cgaacggcac
     1141 cgtatcggta aaggtatcat cctggaagcg gcgaaagccc tgtaggaagg tccagtcgat
     1201 tggcccgagc tttccttccg cgccgacacg aaaatcatta gcccgcgagc gcgcgtttgc
     1261 caacagttga aactgattgc cgccggcgga ataagtcgtg aagaagggac cggtgtaacg
     1321 ctcaggcgaa taacctatgt tgaaactgat ggtctcgttc tttggcagaa tagtgagatc
     1381 gaagtcgccc atctgagtgc gcgtgttgta gctgtgaaat ccgctgaccg gattaggttg
     1441 caggccaaag ctccaaactg gatttacaat gttgttgagg acgcgatagt acttgaagcg
     1501 gcgatagttt ccatcgaacc gatacgcctg cggcttttcc atgcgtattc gcacatttcc
     1561 cgatgggtca gcgccccagc cagtagaggt caccagcagc gaatcgaaga agccgccctt
     1621 gccgttcttc gcttgcacca acagacttga atcaaacagc cgcggccccg ctttgtaatt
     1681 caaatcgctc ttgaacttgt tgacgtctcc accgacgcga attccgcggt agccaaactc
     1741 aagcgtcgag gtcacggtgt aatcgccagc gtcctcgccg gtggtggcag acgtaggaac
     1801 agattcagtc ttcgccggct tgctggcctt cgtggtcgtc ttcgtacttg tgttcgttgc
     1861 ttcaggagac tgcgtcggcg tcggcgccgg ttgtgccacg acggcactcg tcgtcagcag
     1921 aagtgccgcg gtcagtcccg gcaacgctcg cagacttctc aatttggttt tcataccatt
     1981 gatcctttgg ctcatctgtt tcgaggcggg gtaacgcccg ccggtggcag cggcggatcg
     2041 tcctccgccg ctgaactcac gacgctatcg gaagaagaca gggctcgaac gcgagccgtg
     2101 gatcttcacg tgacacgtgg tgcaatcccg gtattgctga ttctggttgt gcgtcggtcc
     2161 gaccggttcc agcgccccaa cgccgtgatc gacgctgtgg caggtcaggc agagctgatt
     2221 aatcgcgctg tactgaagca accgcggatt cgccgatccg tgcggcgtgt gacaggcctg
     2281 acagccttcg gtcttgatcg gtgcgtgctc gtaagtgaac ggcccctgct tgtcggcgtg
     2341 acacttgatg caagcggcat ccgcgcccgt cgccagcctg gtctgcttca actcgaaacc
     2401 gccatgcgga ttgtggcaat cgctgcaacg cattgcgcct tccaacactt tgtgatggaa
     2461 aggcatgttg aacgctggct tcacctcgct atgacagccg atgcagagct gcgggtcgtt
     2521 tgccttgagc atcgcaatcg tcgcgaagcc cggcttttcc gcattaggcg tggtaacaaa
     2581 ctgattcgag ctggcaacat tccgccccgt tacattcgaa tgtgacgagt gacagtcagt
     2641 gcagccgatg tcattgcgcc agtg
//
LOCUS       DATDBY010000017         2450 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2636109, whole genome shotgun sequence.
ACCESSION   DATDBY010000017 DATDBY010000000
VERSION     DATDBY010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2636109"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VIT19_00360"
     CDS             <1..182
                     /locus_tag="VIT19_00360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837454.1"
                     /translation="EKGKRADLILLNANPLDNIEATKNRAGVMLKGKWYPQAALNREL
                     DEIAPKIQNSFIEKK"
     gene            395..604
                     /locus_tag="VIT19_00365"
     CDS             395..604
                     /locus_tag="VIT19_00365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837455.1"
                     /translation="MRDPMLAGILSFIVPGVGQLYNGRILAGILWLIVTPGFWIGSGG
                     TLGWICHIISAWTAYSYAKDHPVRV"
     gene            complement(674..1297)
                     /locus_tag="VIT19_00370"
     CDS             complement(674..1297)
                     /locus_tag="VIT19_00370"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEY5837456.1"
                     /translation="MLLLIDNTIEGVGSSPREIRSALERIEPGVRIVTERFEDISPEH
                     VKVLGPSHIFLSGQSHPWERYSRDELAGVFHVIHHASQPILGVCGGQQQIALAYGARV
                     DLIKRIAPGEGYEGAVRERGYCSVDLQSSNGIFGGLPETITVWESHCDEVKDLPADFI
                     QTATNETSHIQAMQHTSRPLFGVQFHPELFDEEHPHGRTILENFLKL"
     gene            complement(1377..2372)
                     /locus_tag="VIT19_00375"
                     /pseudo
     CDS             complement(1377..2372)
                     /locus_tag="VIT19_00375"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
BASE COUNT          563 a          684 c          644 g          559 t
ORIGIN      
        1 tcgagaaagg caaacgggcc gatctaatcc tgttgaatgc caatccgctc gacaatattg
       61 aggcgacaaa gaaccgggcg ggggtaatgc tcaaaggcaa atggtaccca caggccgcgc
      121 tcaaccgcga gctggatgaa atcgctccca aaattcaaaa ttcgtttatt gagaagaaat
      181 aagataggcg aatcttcaag gcctcacctg attgtgccaa ctcgttctgt gtctctgtga
      241 aaaactctgt gactctgtgg tgagtgtttg ttagatattt tccaccacag aggcacaaag
      301 gactcacgga gacacagaga aaaacccaga gcgcgacttc atccgaacaa atccctaaga
      361 gccaacgtat attttcgcgc ggaggtaatc acttatgcgc gatccaatgc tcgccggcat
      421 tctcagtttt atcgttcccg gagtagggca actctataac ggccgaattc tggctggaat
      481 tctctggctc atcgtcactc caggcttctg gattggatcg ggcgggacgc tgggctggat
      541 ctgtcacatc atttcggcct ggaccgccta ctcgtacgcg aaagatcatc cggtgcgggt
      601 gtgaactcgc cggtacgcag gcctccggcc tctaaagaag gaacaaaagc aggcgggacg
      661 cctgcgtacc cgcttacaac ttcaaaaagt tttccaggat ggttcggccg tgcggatgct
      721 cttcatcgaa gagttcggga tggaactgca cgccgaagag aggccgcgac gtatgttgca
      781 tagcctgaat gtgtgacgtt tcgttcgtgg cggtctgtat gaaatcagct ggaagatctt
      841 tcacttcatc acaatgtgat tcccagaccg tgattgtttc gggcaaccct ccgaagattc
      901 cgttcgagga ttgcagatcc actgaacaat aaccgcgctc acgcacagca ccttcgtaac
      961 cttcgccggg cgcaatccgt ttgattagat cgacgcgtgc accgtacgcg agcgcaatct
     1021 gttgctgacc gccacacacg ccgagaatcg gctgcgacgc gtgatgaatc acgtgaaaaa
     1081 ctccggcaag ctcatcgcgc gaatagcgtt cccacggatg gctctggcca ctgaggaaga
     1141 tgtgggacgg gcccaggact ttgacgtgct ccggcgaaat gtcttcgaag cgctcagtaa
     1201 cgatgcgaac tcccggttca atccgttcga gcgccgagcg aatctcacgt ggacttgagc
     1261 cgacgccttc gattgtgttg tcgatgagta agagcataag aacagaggtc aagatcagac
     1321 atcagaggtc agtagtcagt ggtaacgcat aaccgtcgag aattcggacg actagactaa
     1381 cgtctgacct ctgacgtctg atctctgact tcttcctgct tgggttccat tcccaaacaa
     1441 tgcagcttcc cattgaacgc gccgatgtaa atgcgtccgt cgagaatcgc cggcgttgag
     1501 ttgatgttgt cgccaatctt cagttcggaa atcagctcac cgttgtcggc atcgaccatg
     1561 tgcatccatc cggctttgtc gccaaagatg acccggcctt cgaccaccgg cgaggtaccc
     1621 caaatgctcg cgcgcgcttt gtatttccac acgagctcac ctttgtcggc actcaggcag
     1681 tagagatagc gattgcccgc gccgatgtag atgcggtctt tgtagtaaat cgggctcgcc
     1741 cagattccgt ttctctcgct ggcgtgacca acgcgaccgc cttccgtcac gtactgccaa
     1801 accaactcgc ccgtgtcctg tttgtacgcg cgcaccacgc cgtcttccgc cgccgtgtaa
     1861 accaggccgt tcacgactgc cggcgttgaa tcggaatcag cgccaatcct cgtcttccaa
     1921 atcgttcgtc cgtcggccgg atcgacgcaa tagagatcgc cttgctcagt gctgaagtaa
     1981 gcgcggccgt ctttcatcgt gatgttgcct tcgaccgagc cgaccggcac tttgtagatg
     2041 agagaaccgt ccgtgaaatt cagacaatag aagtttcgat cttcggcgcc gaagtaaagc
     2101 cgatcaccaa ccagcacggt cgagccatcg atttcgaagc cagtcttgta ttcccaaatc
     2161 agcgtgccgt cgttcgcgtt gatgcaataa atactgtgat ccagaccgct ggcaatgatc
     2221 ctgtcgccga agattgcggg agtcgctttg aagctgtctt tgcctttgaa cttccagata
     2281 acgctgccgt catctttgtc gaggcagtaa acgttgccgt cggccgaagg aaagtaaacg
     2341 cgatcgtctt tgattgaggg ctggcccggc cacgatgtgc caccccaagg tctttgtgca
     2401 gtcggcccga gatgaagccg gtttcaactt cccagatgac tgtcaactcg
//
LOCUS       DATDBY010000018         2636 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_804129, whole genome shotgun sequence.
ACCESSION   DATDBY010000018 DATDBY010000000
VERSION     DATDBY010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2636
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_804129"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..439)
                     /locus_tag="VIT19_00380"
     rRNA            complement(<1..439)
                     /locus_tag="VIT19_00380"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(827..1990)
                     /locus_tag="VIT19_00385"
     CDS             complement(827..1990)
                     /locus_tag="VIT19_00385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837457.1"
                     /translation="MTAKAPHSQVVLVIYISAVIISTFVLAGCSTFASRANTGVVVSQ
                     RAQIRSSTAVVAADLLEVSRGDAVEILDSTEVPDPTDNSRNELWYRVRATTDVDKTEG
                     WIEARNIMPEDVLEKSRKLGAEDKDIQAQATGQLHASSNLRLTPERTTNDNIMMRLDS
                     GSSFEIVGWKRMPRVKDAEGDSDVAPKAGSAAVATRRTGRGDERAEEEQETTELWYKV
                     RLAPEISPAPAGWIFGKQVELTVPSDIIYYRTGREFVAWRRLDEEPSDETSATTKTKD
                     VAKESRPGSWVILERSNPKNEPRKIGEPDFDRIYVLGYEKHDQDHYTAYRSPDVEGYL
                     PVRVEGRGANKTFTVRIKDESGQVKDMTFSLYRDQHGVMRVNSPEQMKTAKKK"
     gene            complement(2169..>2636)
                     /locus_tag="VIT19_00390"
     CDS             complement(2169..>2636)
                     /locus_tag="VIT19_00390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837458.1"
                     /translation="YDGSVATTNAPPLSLIDASKQRWTIGAPSVYSKAMVVAFLYDLN
                     LRSQTGGKRSLDDVYRRVFRDHPRKSAVKQAEADGNAAATMALRSELSAANFIERFIT
                     APVSIDLKNELAPFGLRVEKMVRTHISVSEDVSKRQRDLLKQLGYNEPRVRRR"
BASE COUNT          518 a          765 c          676 g          677 t
ORIGIN      
        1 tcccgaggga tttcatcctt cacgcggcgt tgctgggtca ggctttcgcc cattgcccaa
       61 aattcccgac tgctgcctcc cgtaggagtc tgacccgtat gtcagtgtca gtgtgaccga
      121 ccgccctctc aggccggtta cagatcgtcg ccttggtaag ccgttacctt accaactagc
      181 taatctgccg caggctcctc ttcaggcgcg aggtcctaaa atcccccgct ttaacaactg
      241 tcaccatgtg gtgccgctgc attatgcggt gttagcccaa gtttccctgg gttattcccc
      301 acccgaaggt agattaccta cgtgttactc acccgtgcgc cactctactc accccccgaa
      361 ggggactttc gcgttcgact tgcatgtctg aggcacgccg ccagcgttga ttctgagcca
      421 ggatcaaact ctcgttatta gtttgttcac tggaacatta tctcttactg gtctaaatat
      481 cagtttcgat aatgactctt cttcagagtt ttgcgcgaac tttatcgttc gcgttttgac
      541 tctcaaaggt ctaattgaaa cggacacgct ctatctagtt ttcaaagatc gaaccgaatt
      601 gtgatccggg cttggatggg ttaaggacta ctttgagttg gcctttatga ggatattatc
      661 ctcccaagca atcgcgtaat atagcggacg cgcatcggtg tgtcaagcgc aggaacaaag
      721 tttttcaaca ttaactctgt tgcggttcac cgtgaggctg ccccgcgctt tcgttgcgac
      781 cgggtttaga tgagcaaata gtcttccggt tgcccgctgt cccagcctat ttcttcttcg
      841 ctgttttcat ctgctcaggt gaattgacgc gcatgacgcc gtgttggtcg cgatacagac
      901 tgaacgtcat atctttgacc tggcctgatt catctttgat acgaaccgtg aaggtcttgt
      961 tggcgccgcg gccctcgacg cgcaccggca agtagccttc gacgtccgga ctgcggtaag
     1021 cagtgtagtg atcctgatcg tgcttctcgt aaccgagcac ataaatccga tcgaagtcag
     1081 gttcgccgat tttgcgcggc tcattttttg gattgctccg ttcgagaatt acccaactgc
     1141 cggggcgcga ttctttcgca acgtcctttg tcttcgtcgt cgctgatgtt tcgtcgcttg
     1201 gctcttcatc cagccggcgc caggcaacga attcccttcc cgtgcggtaa tagataatgt
     1261 cactcggaac cgtgagctca acttgctttc cgaagatcca gccggcgggt gcgggtgaga
     1321 tctcgggcgc cagacgtacc ttgtaccaaa gttccgtcgt ctcctgctct tcctcggccc
     1381 gttcgtcacc ccggccagtt cttcgagttg cgacggcggc gctcccagcc ttgggcgcca
     1441 cgtcgctgtc gccttcagca tccttaacgc gcggcatccg cttccacccg acgatctcaa
     1501 agctcgatcc actgtcgagc cgcatcatga tgttgtcatt cgttgttcgc tctggcgtca
     1561 ggcgcaagtt ggaacttgcg tgcagctgtc cggtggcttg cgcctgaatg tccttgtcct
     1621 cggcgccgag cttgcgcgac ttctcgagca cgtcctcggg catgatgttg cgggcttcga
     1681 tccagccttc cgtcttgtcg acgtcggtgg tggcgcgcac gcgataccac aactcgttcc
     1741 ttgagttgtc cgtcggatca ggaacttcag ttgagtcgag aatttcaacc gcgtcaccac
     1801 gacttacttc cagaaggtcg gcggcaacga cggcggtaga gctgcgaatc tgagcgcgtt
     1861 gcgacacgac aacgccggtg ttagcgcgac tggcaaaggt gctgcatccg gcaagcacaa
     1921 atgtcgaaat gatcacagca gagatgtaaa tcactaaaac aacctgggag tgcggagctt
     1981 tggcagtcaa ttggtttagc gcaaagactt ctcccctctc cgcttcgcgg agaggggttg
     2041 cgggagaggt tgagcgacgt gccaacccca cccttaatcc ctccccgcac cgcggggagg
     2101 gaaaccttgt agagttatcg atcatattcc tgtcgacccg aacagttccg aacttgcgtt
     2161 gtgcaacctt atcttctccg cacgcgcggc tcattgtaac ccaactgctt caacaaatcg
     2221 cgctgacgtt ttgagacgtc ttcgctgacg gaaatgtgag ttcgcaccat cttttcgact
     2281 cgcagaccaa acggtgcaag ctcgttcttc aaatctatcg acacaggcgc ggtgatgaaa
     2341 cgctcaatga aatttgcggc tgacagttcg cttcgaagcg ccatcgtagc cgcggcgttt
     2401 ccgtcggcct ctgcctgttt gaccgcggac ttgcgcggat gatcccgaaa gactcgccgg
     2461 tagacatcat cgagcgaacg cttccctcct gtttgcgatc tcaaattcaa atcgtaaagg
     2521 aaagctacga ccatcgcctt cgaataaact gatggagcgc cgattgtcca ccgctgtttt
     2581 gatgcgtcaa tcaatgataa gggcggtgca ttagttgtcg ccaccgatcc gtcata
//
LOCUS       DATDBY010000019         3877 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2003267, whole genome shotgun sequence.
ACCESSION   DATDBY010000019 DATDBY010000000
VERSION     DATDBY010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3877
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2003267"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..412
                     /locus_tag="VIT19_00395"
     CDS             20..412
                     /locus_tag="VIT19_00395"
                     /inference="COORDINATES: protein motif:HMM:TIGR00049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HEY5837459.1"
                     /translation="MSANPAITTSTTPAAPAAPSVNLNVTEPAAVEIKKFMSSEEGLP
                     ETAGLRVRVVPGGCSGFQYSLNIEEASRQGDFVLDEKGVRLFVDMFSAQYLNGVQSDY
                     VTNVMGAGFTFTNPNATGSCGCGSSFTA"
     gene            485..1021
                     /locus_tag="VIT19_00400"
     CDS             485..1021
                     /locus_tag="VIT19_00400"
                     /inference="COORDINATES: protein motif:HMM:NF040422.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6438 domain-containing protein"
                     /protein_id="HEY5837460.1"
                     /translation="MKSFLLFLLISLTIMVAGLDCSAQTQSPSTINEIVLEATAGLKL
                     TEPGGLYGTAFKVTFQRDGLALYAGSRNVKLIGSYQGTISAEEFNNLVEFVNARDFSP
                     IPADPVQASRTTGGAETYALKPKMTITITYESGNLQRNSRLAELSPLDREKLPKALFE
                     IEQAILDASARIKWREVE"
     gene            1043..1537
                     /locus_tag="VIT19_00405"
     CDS             1043..1537
                     /locus_tag="VIT19_00405"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5837461.1"
                     /translation="MATIRQVAGEEDVKQARGLFREYEAWLGLDLCFQNFEKELAELP
                     GAYAPPTGRLLLAFEDDQLAGCVALRKLEEGICEMKRLFLRPEFQGKGWGRVLAQRIM
                     DEARRAGYKRMRLDTLPQQMGKAIGLYYSLGFREIEPYYDNPVAGAIFLERSLNQRIV
                     DLLD"
     gene            complement(1771..3531)
                     /locus_tag="VIT19_00410"
     CDS             complement(1771..3531)
                     /locus_tag="VIT19_00410"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY5837462.1"
                     /translation="MAAHRHRFCLILIKPSHYDDDGYVIQWWRSAIPSNSLAVLYGLA
                     LDCAEQKVLGEDVEIEIHAFDETNTRVSTRRIASLIESAGAGMVMLVGVQSNQFPRAL
                     DIARPLRERGVMVAVGGFHVSGTIAMLPERDPDVSRAEQLGVSLFAGEAEGRLAEVLR
                     DAANDRLKPLYNFMQDLPNLDGAAIPLLPPERVKRTIGATTSLDAGRGCPYQCSFCTI
                     INVQGRKSRWRSADDVERIVRTNVARGLHSFFITDDNFARNKDWEAILDRMIYLREDE
                     KLRISFIIQVDTLCHRLPNFIEKCARAGIKRVFIGLENINPDNLLGAKKQQNKITEYR
                     EMLLGWKHAGILTYCGYILGFPNDTPDSILRDIRIIQRELPVDLLEFFYLTPLPGSED
                     HLNLYREGAWMDPDLNKYDLNHAVMEHVHMPKAVWERTYRAAWETYYTSEHVETVLRR
                     AMATGTSPGKAVLFITWFKGCIGIENLHPLEGGFVRLKFRRDRRSGMHLESPFLFYPR
                     LLGQLIGKQLRWVFLYARLYRTYQKIKRDPNRLDYTDVALTPDTDDEMETRELFQTAA
                     AQNFVQKIQRVERLSKGAAA"
     gene            complement(3581..>3877)
                     /locus_tag="VIT19_00415"
     CDS             complement(3581..>3877)
                     /locus_tag="VIT19_00415"
                     /inference="COORDINATES: protein motif:HMM:NF014669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HEY5837463.1"
                     /translation="FGPTGGYLLSFPAAAFITGAFAEQGWDRKFSTAVAAMFIGSLVI
                     MLCGWLWFSYLTRTSPLVAFQFTVLKFIPGDIIKILLAAAVLPTGWKLLRKTGK"
BASE COUNT          931 a         1029 c         1064 g          853 t
ORIGIN      
        1 atcaggagtt aactaaaaca tgtcagctaa tccagcaata acgacttcta caacccccgc
       61 ggcgccggcc gccccgtcgg tgaacttgaa cgtcaccgaa ccggccgcag tcgaaattaa
      121 gaagtttatg tcgagtgaag aaggcctgcc ggaaactgcc ggcctgcgcg tgcgcgtcgt
      181 gccgggcggc tgctcgggat ttcaatacag tttgaatatc gaagaggctt cgcgccaggg
      241 cgactttgtg ctcgatgaaa aaggcgtgcg cctttttgtc gacatgttca gcgcgcaata
      301 cctgaacggc gtccagagtg attacgtcac aaacgtgatg ggcgcaggct tcacgttcac
      361 taacccgaac gcgaccggaa gctgcggctg cggatcatcg ttcactgcgt aaagtattct
      421 ttctctttca aaggtgcggc tcgggctaat aggttcgcgc cgcccttttt attttgcaaa
      481 gcccatgaaa agtttcctct tgttcctgct catcagtctg acaatcatgg tggcaggcct
      541 cgactgctca gcgcaaacac aatctccatc gacgattaac gaaattgttt tggaagcaac
      601 ggcgggactt aaactcaccg agcctggagg gctttatggc actgctttca aagtaacttt
      661 tcagcgagat ggtcttgccc tctacgccgg gagccgaaat gtgaagctca tcggtagtta
      721 ccaggggact atatccgctg aagaatttaa caatctcgtt gagttcgtga acgccaggga
      781 cttttcacct attcccgctg acccggtaca ggcatctcga actactggcg gcgctgagac
      841 ttatgctctc aaaccgaaaa tgacaataac tatcacctac gagagcggca atctgcagag
      901 aaactcgcgt ctcgccgaat tgagtccgct cgatcgggag aagttaccga aagccctatt
      961 tgagatcgag caagcaattc ttgatgcctc agcccggatt aaatggcgcg aggtcgaata
     1021 aaacccacaa attcaaaaca gcatggccac tatccgccag gttgcgggcg aagaagacgt
     1081 caaacaggcg cgcggacttt tccgcgaata tgaagcctgg ctcggactcg atctgtgctt
     1141 tcagaacttc gaaaaggaac tggctgaact gccgggagcc tacgcgcctc caaccgggcg
     1201 tttgctgctg gcctttgaag acgatcagtt ggcgggctgc gttgcgttgc ggaaactcga
     1261 agagggcatc tgtgagatga agcggctatt cctgcggccg gagtttcaag gaaagggctg
     1321 ggggcgagtg ttagcacagc gcatcatgga cgaagcgcgg cgcgccggtt acaagcgaat
     1381 gcggctcgac acgcttcctc agcagatggg aaaagcgatc gggctttatt actcgctcgg
     1441 cttcagagag atcgagcctt attacgacaa cccggtggcg ggcgccatat ttctcgagcg
     1501 cagccttaac caacgaatag ttgatcttct agactagtga atgatgttgg cgggagctca
     1561 ccgctttatt gatttggcct atttcttctt cagcagtttc caaccggtgg gaagcaccgc
     1621 cgccgccaaa gagatcttaa ggatatcgcc gggaatgaac ttcaagacgg tgaactgaaa
     1681 agcgacgagc ggtgacgtgc gcgttattta tggagttagt gcttgatcag gcgctgataa
     1741 cgtaaaggcg aatcgaccaa cccggccggt tcatgcggcc gcgcctttac ttagacgttc
     1801 cacgcgctgg atcttttgga cgaagttttg agctgcggca gtttgaaata gttcgcgcgt
     1861 ttccatctcg tcatcagtat ccggcgtcag agcgacgtcc gtgtagtcga gtcggtttgg
     1921 gtcgcgtttg attttctgat aggtccggta taaccgagcg tacagaaaga cccaacgcaa
     1981 ctgcttgccg attaactgcc caagtaaccg cggataaaac aaaaagggag attccaagtg
     2041 cataccactg cgccgatcgc gccggaactt taatcgcaca aaaccgcctt cgagtggatg
     2101 caggttctcg attccgatgc agcccttaaa ccaggtgatg aacaaaaccg ctttgcccgg
     2161 agaagtgccg gtagccattg cgcgccgcaa taccgtctcg acgtgttcag aagtgtagta
     2221 ggtttcccac gccgcgcgat aagtccgttc ccatacggct ttcggcatgt gcacatgttc
     2281 catcaccgca tgattcaggt cgtatttgtt gagatccgga tccatccacg cgccttcgcg
     2341 ataaagattc aaatggtcct ctgaacccgg caacggcgtc agataaaaga attcgagcag
     2401 atcgacagga agctcccgtt gaattattcg aatgtcgcgt agaatcgagt cgggcgtgtc
     2461 gttcggaaaa ccgagaatat agccgcagta cgtgaggatg cctgcatgct tccaccctaa
     2521 caacatctcg cgatattcgg tgattttgtt ttgctgcttc ttggcgccaa gcagattatc
     2581 ggggttgata ttctcgagac cgatgaacac gcgcttgatg cctgcgcgag cgcacttctc
     2641 aataaaattc ggcagacggt ggcagagcgt gtccacctga atgataaagc tgatgcggag
     2701 tttctcatct tcgcgaagat aaatcatccg atcgagtatt gcttcccaat ccttgttccg
     2761 cgcgaagttg tcgtcggtaa tgaaaaacga gtgtaatccc cgcgcgacat tggtgcgcac
     2821 aattctttcg acgtcatcgg ctgaacgcca gcgcgacttg cggccctgca cgttaataat
     2881 cgtgcagaag ctgcattgat aaggacagcc gcgtccggca tcgagactgg tagttgcgcc
     2941 gatcgttcgc ttgacccgtt ccggcggtag cagcggaatc gctgcgccat ccagattggg
     3001 caggtcttgc atgaaattgt aaagcggttt caatctgtca ttcgcggcat ctcgcagtac
     3061 ttcggccagt cgtccctcgg cttcgcccgc gaaaagcgaa acacccagtt gttcagcacg
     3121 gctgacatca gggtcgcgtt ccggcagcat ggcgattgtg cctgacacgt gaaacccacc
     3181 gacagcaacc attacgccgc gctcgcgcaa cgggcgtgcg atatcaagtg cccgcggaaa
     3241 ctggtttgac tgtacgccga ccagcattac catgccggcg cccgcgcttt caatcaaaga
     3301 ggcaatgcgc ctggtactaa cccgggtatt agtttcatcg aaggcgtgaa tctcgatctc
     3361 gacgtcctcg ccgaggactt tttgttcggc gcagtcgagc gccagcccgt agagtaccgc
     3421 tagagagttc gaagggatgg ctgatcgcca ccactgaatg acgtagccgt catcgtcgta
     3481 gtgtgatggc ttgatcagaa tgagacagaa acgatgcctg tgagctgcca tggaaaaagg
     3541 tgagccggag cccgggaaca ggttgaaaat gtgacaaaga ttactttccg gtcttgcgca
     3601 acagcttcca tcccgttgga agcacggcgg cagccagaag aatcttgatg atatcgccgg
     3661 gaatgaactt caggacagtg aactgaaaag cgacgagcgg cgaagttcgc gtcaaatacg
     3721 aaaaccaaag ccagccgcag agcatgatca ccaatgagcc tatgaacatg gcggcgaccg
     3781 cagtcgaaaa ctttcgatcc cagccttgct cagcgaacgc accggtgatg aacgcggccg
     3841 cggggaacga cagaagatag ccgcccgtgg gtccgaa
//
LOCUS       DATDBY010000020         2721 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_803969, whole genome shotgun sequence.
ACCESSION   DATDBY010000020 DATDBY010000000
VERSION     DATDBY010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_803969"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(351..1457)
                     /locus_tag="VIT19_00420"
     CDS             complement(351..1457)
                     /locus_tag="VIT19_00420"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5837464.1"
                     /translation="MKPRRQSALAVVSLFALVCFSAFLASHNGKAQKKPDAKPSPTPA
                     KELLTVEPVLPPAPAKESGPAKETPKAQSGDAQQKPGTEVDDKIPVITNTDLITFTVT
                     VTDLYGRFVSGLSKNAFTIFDNKEAQDIVYFSDDDSPVSVGVLFDVSGSMSGDKVRRA
                     RDALAHFIQTSHDRDEYFLIGFNSRAQLLLDKTRDGNAVLDKLTFVQTKNNTALYDAC
                     YLGVERVQRGAHSKRALLLISDGQDNNSRYTFNELRRVLKESDVVLYSVGILGGSDVG
                     SSLGMEGQSILDELAGVSGGKAFYPRSPAEMDDIFEQIALELRHQYSIGYRPKNFVND
                     GKWHRIKVKVNAPRGLPRLFVRSREGYYAIANPK"
     gene            complement(1725..>2721)
                     /locus_tag="VIT19_00425"
     CDS             complement(1725..>2721)
                     /locus_tag="VIT19_00425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837465.1"
                     /translation="GGRHRAEDGGTNQAELSRQVKKTILHPTRLVTATLLCLLTASCS
                     SNLVKSLSGMNALRQHLIQKYGDQVNLNIHNSRYLNVAFINSQLNHQDRAKRMERAQD
                     AARFVAQNYDDIKSIEQVWISFVATETRYLIIHYTQGIDSFGFDRNGARLSAPAVGKD
                     PVVITDTTESSDPRAPVARYSQAANRTDISVTRIQLEGDIKRGMALVPHYTVLGDARI
                     LGAATTPPDFVVFDFASYADKPLFQQSPPLEIYCDGRLALKGVASLVPTAESGFDETV
                     GQFLSVQVSFKLLQRMADSRRVRIVLGQKQFELLPDDINALARMTAYVPRSSTVP"
BASE COUNT          601 a          738 c          781 g          601 t
ORIGIN      
        1 gtcggggtag gcgacgccgt cgttgtccgc ggacgttcct gcgcagtcgt aatgccggcc
       61 acaattacag acagggtcgc gagcgcgctt aaccaaacga ccaacgtgcc gcgacgggag
      121 ccaataccct caaaaccctt aagacgcatc aatgagtacc ttgtttgaat aaaagaccaa
      181 tgtcaaacca atttcgggtg caggaggaga atgtaaagat gcggaaatgg cgagtctgcg
      241 ttggctgcac ggcgcccaaa gtccaaagtc ccgcgtccaa agtctaaagt cccctttgga
      301 aggagatggt tctaacattg gaccttgggc gttggactgg cgacgcgtgc ttacttaggg
      361 tttgcgatgg cgtagtaccc ttcgcggctg cggacgaaca agcgcggcaa accgcgcggc
      421 gcattcacct tgaccttaat cctgtgccat ttgccgtcgt tgacgaaatt cttcgggcgg
      481 tagccgatgg aatattgatg gcgcaattcg agcgcgatct gctcgaagat gtcgtccatc
      541 tcggccgggc tgcgcggata aaaggccttg ccgccggaga cgccggccag ttcgtcgaga
      601 atgctctggc cttccatgcc gagcgaactg cccacgtcgc tgccgcccag aatgccaact
      661 gagtacagca cgacgtccga ttctttcagc acgcgacgca actcgttgaa ggtgtaacgc
      721 gagttgttgt cctgtccgtc actaatcagc agcaacgcgc gcttcgaatg agcgccacgt
      781 tgtacgcgct cgacgcccag ataacaggca tcgtacaggg cggtattatt cttcgtttgc
      841 acgaaggtta gtttgtcgag cacggcgttc ccatcgcgcg ttttatccaa caaaagttgc
      901 gcacgcgaat tgaagccaat cagaaagtat tcgtcccggt cgtgactggt ttgaatgaag
      961 tgggccagag cgtcgcgcgc gcgccgcact ttgtcaccac tcatcgatcc ggaaacgtcg
     1021 aagagcactc cgacagaaac gggcgaatcg tcgtcgctga aatacacaat atcctgcgcc
     1081 tctttgttgt cgaaaatcgt gaacgcattc ttcgacagtc ctgaaacaaa tcggccgtaa
     1141 aggtccgtga cggtaacggt gaaagtgatc aggtcggtgt tggtgatgac tggaatcttg
     1201 tcgtcaactt cagttcccgg cttctgctgg gcatcaccgc tttgcgcttt cggcgtttct
     1261 ttggccggcc cggattcttt cgcgggcgca ggcggcagca ccggctcgac cgtcagcaac
     1321 tctttggccg gtgtcggaga tggcttggca tccggctttt tctgggcttt gccgttgtgc
     1381 gatgcgagga aagcggagaa acagacgaga gcgaatagag agacaacggc gagtgctgac
     1441 tgacgacgcg gcttcattaa gaacccccga cctcggaaaa gctttccggc attcgcttcg
     1501 atgagcggca ggacgcgatc agttgcgtgt ggggaaacca gatatgccgc ttgacccgaa
     1561 acaagattcg gtttgagcta ttccacttta aagagtctgc gctgccttga aaagttaagc
     1621 gcagcttcac ccgatgaacg ctgcggggag acgctgcgat tgccaggaca gtcggctaat
     1681 gcgacgcatt gtaggacgag cacccgccaa cgcgcaagat gggattatgg cacggtgctc
     1741 gaccggggaa cgtaggcggt catccgggcc agtgcgttaa tgtcatccgg caacagctcg
     1801 aattgctttt gtcccagaac gattcgaact cgccttgaat ctgccatgcg ctggagcagc
     1861 ttgaacgaga cctgaactga cagaaactgg ccgaccgttt cgtcaaagcc ggattccgcg
     1921 gtcgggacca atgatgcgac acctttcaaa gccagccggc cgtcgcagta gatttccagc
     1981 ggcggacttt gctggaacaa aggcttatcg gcataagacg caaagtcgaa caccacgaaa
     2041 tccggtggcg tcgtggccgc gcccagtatc cgagcgtctc caagaacggt gtagtgtggc
     2101 acgagcgcca tgccgcgctt tatgtcgcct tcgagttgga tacgcgtgac acttatgtct
     2161 gtccggttcg ctgcctgact ataacgtgcg accggagccc gtggatcgct tgactccgtg
     2221 gtatcggtga tgaccaccgg gtccttgccg actgccggcg cgctaagcct ggccccgtta
     2281 cgatcgaaac cgaacgagtc aatgccctgg gtgtaatgaa taatgaggta acgcgtttcg
     2341 gtcgccacaa aggaaatcca gacttgttca attgacttaa tgtcatcata gttctgcgcc
     2401 acaaagcgag ccgcgtcttg tgcccgctcc attcgtttgg cacgatcctg atgattcaat
     2461 tgcgagttga taaaggcgac atttaggtaa cgtgagttat gaatgttgag attaacctgg
     2521 tcgccgtatt tctgaatcag gtgctggcga agcgcattca tgccgctcaa ggatttcacg
     2581 aggttgcttg agcagctcgc ggtgagcaag cagagcaatg tcgccgtcac taaacgagtg
     2641 ggatgcaaaa tcgtcttttt cacttgtcgg ctaagttctg cctgattcgt tccgccgtct
     2701 tcggcccgat gccgtccacc a
//
LOCUS       DATDBY010000021        15848 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1621786, whole genome shotgun sequence.
ACCESSION   DATDBY010000021 DATDBY010000000
VERSION     DATDBY010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 15848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15848
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1621786"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..453
                     /locus_tag="VIT19_00430"
     CDS             <1..453
                     /locus_tag="VIT19_00430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837466.1"
                     /translation="NLTSNLKASEKDVIKLGLVYGEGIQNYMNDADTDVGIRLNPGGD
                     PRRPIVGAALPMLGITAFLDHNWSKRFSSAIGYSMLNVENFNGQAPNAYRRGHYGLGN
                     LLYYPVENVMIGGELQWGRRENFLDGYNSEDVRIQFSFRYNFKKDLKF"
     gene            526..2004
                     /locus_tag="VIT19_00435"
     CDS             526..2004
                     /locus_tag="VIT19_00435"
                     /inference="COORDINATES: protein motif:HMM:NF023165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HEY5837467.1"
                     /translation="MRRAHSGRGTWARLSVAIGCVVALIAAGPAAIARGSIEATSHNE
                     VPALADDTAAKIPPEQLDSLVAPIALYPDNLLAQTLVAATYPLELVQLHQWLQKNAEM
                     AKDQKKLAEAVKKQPWDPSIQAMAPLPDLVKRLTDDIQYTTDLGNAFLAQQKDVMDAI
                     QRMRGKAQEKGALKSNEQQKVQTQTVENNQVIVIEQANPQVVYVPQYDPQYVYPPPAY
                     PYPPIYYPPYYPGTGAVIAATAISFGVGWAMGAAWGGGWGWGAGWGGGDININRNNNF
                     NRNTNIQGGNRGGNSWQHNPSHRGGAPYGDRGTANRFGGTTRGDSLGNRQRAAQRDIG
                     RQGGNLGSQRGDIGNRGGVGDRGGVGNRGGVGDRGGVGNRGGVGDRGGVGDRGGVGNR
                     NGVGDRGSGLSNRGGVSDRSSGLSNRSSSGSFGNRSGGFGGGSGGFSGRDAGMSSSRG
                     SSSMSRGGGSGGGSRGGGGFGGGGGGRGGGGGGRGGGGGRRR"
     gene            2024..2992
                     /locus_tag="VIT19_00440"
     CDS             2024..2992
                     /locus_tag="VIT19_00440"
                     /inference="COORDINATES: protein motif:HMM:NF022892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2950 domain-containing protein"
                     /protein_id="HEY5837468.1"
                     /translation="MKNTTLELKRATVHFFIVAGASCALLLATVLVAQAQNKTSAARG
                     RTFLTPEQAAAALIDAAEKYDEKALIDILGPDSYDIVHTGEPARDKEMAAQFAAQAKI
                     RQRVTKAARNTKIATLFVGDEDWPFPVPINERQGKWSFNTAAGRREILMRRIGRNELD
                     AIEICRNYVDVQHEYALMKKTAGVNQYAQRIVSTDGQQDALAWKNADGTWGGPLGEEA
                     AAALSKGHQTGQPYHGYFFKVLKGQGPGAPLGELDYVIKGVMIGGFALIASPAQYRNT
                     GVKTFLVSQDGVVYEKDLGPRTLEIFQSIDRFNPDPTWRPVLDKDK"
     gene            complement(3176..4612)
                     /locus_tag="VIT19_00445"
     CDS             complement(3176..4612)
                     /locus_tag="VIT19_00445"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY5837469.1"
                     /translation="MSDVLIIGGGPAGVVAAFRAADAGAKTTLVTRDQFGGMAANDGP
                     VPVRTLAHAARLIRDARQLGRYGIVVGEPRLDFATLLATVRDVVKDVRANSTFRSQID
                     SLGVTVHENSGSARFLDPHTVKTESGLRLSAAKIVICTGGISRQLTVPGAEFTAIHSD
                     AWTLTSVPASILVLGAGATGVQVASVFNAFGSKIQLFQAGPRILPTEDEEVSTAVADA
                     FRNSGVMVRENFGTVDSFEKTPAGVRMWFSKNGRRESVEASLAVCAIGWKADTAELDL
                     ETAGVETDARGFIRVDEFLRTSSQNIFAAGDVTGLLMLVPQAIQQGFVAATNAVRGLT
                     MTIGDRVAPVGSFTDPEYAQVGLTEAKAREKHSIAAATIRFDSTTRTIIDGRTYGFCK
                     LIVDRETRLILGCHVIGERAVDIAQVAAVAIAARMRVDDLAQVPLSFPTYAGALGRVA
                     AKLTHQLNNTRDWESSPADLPPQIRCCL"
     gene            complement(4639..5040)
                     /locus_tag="VIT19_00450"
     CDS             complement(4639..5040)
                     /locus_tag="VIT19_00450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837470.1"
                     /translation="MRDMLIRGWMNLTARVGGPMTFRVILQPLMAALLAFRAGLKDAR
                     TDRPAYFWTVLTDKRQGADLLREGWKSIARVFVLAITMDVIYQLIFLRWIYPLELILV
                     AILLAVVPYLMVRGPVNRIVRRLRSKREAAP"
     gene            complement(5278..6585)
                     /locus_tag="VIT19_00455"
     CDS             complement(5278..6585)
                     /locus_tag="VIT19_00455"
                     /inference="COORDINATES: protein motif:HMM:TIGR01413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HEY5837471.1"
                     /translation="MLELDDIQSGVLRPRPSPYVATYIAFRIDDRKVGRELMRRVSQV
                     VTSAANPKSPLADTWVSVALTYQGLKALGVPQESLNSFSWEFRQGMAARHKDLGDTGE
                     SHPGKWEQPLGSSDLHVVLVAVSPDSERLEAALDRAREAYRAMSGITAIWRQDCHALP
                     NEKEPFGFRDGISHPAIEGSGIPGSNPHEKPLKAGEFVLGYVDEMGGIQKTEPEILGR
                     NGTYVVFRKLHQRVAAFRKYLNANSNGSGDEELLAAKMMGRWRSGAPLALCPMHDDPE
                     LGADAKRNNAFLFEADDPTGLKTPGGSHIRRCNPRDASIAGVARIHRMIRRGTAYGPL
                     LPEGVLDDDGADRGLMFAFVGASLRRQFEFVQSQWINDGVFFGADDDKDPITGSNGVN
                     FTLPRKPLRKRFQGIPQFVITRGGEYCFMPGLRALRWLSELDT"
     gene            complement(6658..7671)
                     /locus_tag="VIT19_00460"
     CDS             complement(6658..7671)
                     /locus_tag="VIT19_00460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837472.1"
                     /translation="MSDAKIARTYNQNHVPRKYTPGKRRLSIYWSWSYAWESQRDLTD
                     LENRFSTMTEVRRVAWPNYEKPEWGSAQFLQGIAGTLELFHRSALSFQEIAGDATGHP
                     VAVFQRIDQAGYKHPVDERILDDCDTLLVFGLDHLASGEQALPEEVQAINEWLRREGT
                     CLLLAPHHDVGFTDDPEQRQVEYEHHGDALVPRQQRFSSYARSLLKALEIPVWNRWGL
                     RPALVEGTRDIAPLTSFRDLDKLELLANVPTLNFHPHLPHYELTNNRGNNVQVLARQP
                     IDPKRPHPFTAEGNTEFNCLLWLPPAGDRAGDIVMVDSTNFTTLFGGTDSLKNFWKNL
                     ATM"
     gene            complement(7710..8246)
                     /locus_tag="VIT19_00465"
     CDS             complement(7710..8246)
                     /locus_tag="VIT19_00465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837473.1"
                     /translation="MEIRPQAMAIPAVSDLENGKYGPIYPKTPACYGFSILAKIIPGR
                     EPVFHEYAKNIEAAVKAQPDVLAPLKLHYLRWLLFPINGETYFMYQGIFDTDFDKYTE
                     DAVALFGAAGVRTVFENLQDFPMDWQTNPEGFVQFVRAHQIPSFLEYGEYPFFSADEI
                     KKALKAKHSLSEMLDQLA"
     gene            8529..9221
                     /locus_tag="VIT19_00470"
     CDS             8529..9221
                     /locus_tag="VIT19_00470"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEY5837474.1"
                     /translation="MKRFLTVAALITVLAQGAFAQSDDYKKWEFFGGYSALGFDTLAG
                     NTGSPVVDEVLGGRNILRGFELSLTRNIHRYVGVKGDYSLHLREDNFSRPAGSGTVDT
                     SVQNFLGGLQFKDNASEARFKFFGHALVGVAVQKVDVDSPDLGAVFGVSDFKTNETSF
                     AMAFGGGLDIRLNSKIDIRAAQIDWNIINRGDQQTGIVLTPTPFQTVGTPFFVPGSRQ
                     DNLRLSIGIVIR"
     gene            9418..9798
                     /locus_tag="VIT19_00475"
     CDS             9418..9798
                     /locus_tag="VIT19_00475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837475.1"
                     /translation="MAIAVAGLAAAQQPASLVASAKGEGKIKLGKEEFKLDGVVVKLF
                     EDGKAELNLITDITVFITGTWSRPSGDDKSIDIKITGNVTARNLNGDGKILLSDDRQS
                     IVGLKLQLFNKVSRKNITAEFLAK"
     gene            10269..10781
                     /locus_tag="VIT19_00480"
     CDS             10269..10781
                     /locus_tag="VIT19_00480"
                     /inference="COORDINATES: protein motif:HMM:NF024978.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HEY5837476.1"
                     /translation="MIAATLGTAHAQKVKVAADPGVDLSKYKTYAWAKGAAAANPIIN
                     QLIKDTIDQTLTAKGLTRVTDEPDITLVAWTAVNSDLHLFQPTWGRSVGSATSSGIPA
                     TVHSAAIANGALVVDIADARTKATVWRGTATQTIKETPSGNMAQDAKNAEKSIRKAVE
                     KMFKKFPAPK"
     gene            10986..11579
                     /locus_tag="VIT19_00485"
     CDS             10986..11579
                     /locus_tag="VIT19_00485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837477.1"
                     /translation="MRTKRLIWVTGFAVLLPTLTLTTSSRSNSGDLASELNAPYTIQA
                     QAMGTSTQLGRNYNITARVKEYSPPEDQAILLEAFKAKGNEGLVNALSKMPAKGRLAI
                     TGTLGGDLAYIRRFDQPDGSIMLRMITNRLLRFGEVWADSRSSDYQLSGLEIVFTKDG
                     KSTGTLIPAAQLKLDKQERIGIETFQWPWNLVNIQIR"
     gene            11628..12536
                     /locus_tag="VIT19_00490"
     CDS             11628..12536
                     /locus_tag="VIT19_00490"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEY5837478.1"
                     /translation="MRYDTAFSEGQHVKLDDELPKPYSSLVAVDVFAMSHQGHVKSNN
                     EDHFLVIRGGRALETVLTNIPQTRPGDLFEETAYGLIVADGVGGEVAGEVASRHAIFT
                     FLNLALRTPDWQVRWGSKEKNTVMHRMQDRFRRVNAALLQEATADSVLTGMCTTMTAA
                     LTHGSSLIVAHIGDSRAYLWRRGHLKRLTRDQTVAERLKDELKSDDEDPLLLELRSVL
                     LQALGSNRNECRVEVGDFVLENGDCLLLCTDGLTDMVSETEIQSVLAKRSSAKSACRT
                     LVDLALANGGRDNVTAIVARYSIPQT"
     gene            12550..13350
                     /locus_tag="VIT19_00495"
     CDS             12550..13350
                     /locus_tag="VIT19_00495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837479.1"
                     /translation="MPIWLYQTHPLFTAIILIAFIETVALIGLFLTRKFVLPRFRYDA
                     EVNDAVSGSVQVIGVFYGITVGLIAVGVWNSHSSSAELVSKEAASIGAMHRDLGGYPS
                     PIKEELRAKLRDYTVFLINDAWPAQKTGQGLFVNRGTAVLDEFQASLFAFQPANPAQQ
                     ALHSETLRAYNILIDYRRLRIDAVNQGLSGVMWAVIWVGAVISIGVAYLFHIEDPKIH
                     FILIGLMAGFLAVVLFMIIVNDRPFYGYVSLTADPYKIILDRVLDLSK"
     gene            13405..14187
                     /locus_tag="VIT19_00500"
     CDS             13405..14187
                     /locus_tag="VIT19_00500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837480.1"
                     /translation="MQDLLTKAVGVTLVSVALASVTFGQSSPDAPRNEIEVRGVVSVP
                     SGEANFSGTTNSGSTLDFNRDFDFKNELGFQIRYTNRSENKKHKIVASYESSSWDRST
                     TLTRSFVFRGETYVANANIQGDLKLRTFRAMYAYRWGNDKIRFGPMVDMGVISAGLDL
                     AGTTNNGTRTTEGSVTKFAATVGYDLDYDPAPNVNIFNNLGVIAFQNDRLFHTEGGVR
                     YYPARQFGVVGGYRYQRYRWVDDNDFLRISAQGPFFGGIFRF"
     gene            14401..>15848
                     /locus_tag="VIT19_00505"
     CDS             14401..>15848
                     /locus_tag="VIT19_00505"
                     /inference="COORDINATES: protein motif:HMM:NF008909.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEY5837481.1"
                     /translation="MRRGLYIERRPGMQSTNMSWFRIRKSRALASLLAVVMLTAPVPV
                     WAQAQTSADKPRIEKDLLGEKEIPANAYYGVQTARALENFQLSGVSISHYPGFIEAWA
                     IVKLAAARANTDVGAMKKERLDAIEKASQALLAGKYHDQFLVDWYQGGAGTSTNMNAN
                     EVMANIGLELTGRKKGEYHHLEPHDDLNMSQSTNDSYPTALKVAIILRNDKLIAELQK
                     LVASFRAKGNAYIEIVKMGRTEMQDAVPMTVGQEFHAFAASLEDEIGGLRDAEKSLYA
                     VNMGATAIGTGINVPKGYPEKCAAHLAKLTGKPIVPASDMLAATWDQRGFVAYSAALK
                     SVAIKLSKISGDLILLASGPRAGLAEIDLPALQPGSSIMPGKVNPVVPEVMNLVAFRV
                     MGNDYVTTLAAHSGQLQLNAYEPIEGLCIIESQHLLFNTSKLFRTKCVDGITVNEKVL
                     ARYMETTVGIVTALNPIVGYEKATELAQEAYK"
BASE COUNT         3612 a         4308 c         4575 g         3353 t
ORIGIN      
        1 aaccttactt caaatctgaa ggcgagcgag aaagacgtta tcaagctggg tctggtttac
       61 ggcgaaggta tacagaacta catgaacgac gcggacaccg acgtcggaat ccggcttaat
      121 cccggcggtg atccgcgacg accaattgtg ggagccgcgc tgccgatgct cggcatcact
      181 gcttttctcg atcacaactg gagcaagagg ttcagcagcg cgattggcta ctcgatgctg
      241 aacgttgaga acttcaacgg acaggcgccg aatgcttacc gccgtggcca ttacggtttg
      301 ggcaacctgc tctactaccc ggtcgaaaac gtaatgatcg gcggcgagtt gcagtggggc
      361 cggcgcgaga attttctgga cggctacaat tcggaagacg tccgtatcca gttttcattt
      421 aggtacaact tcaaaaaaga cttgaagttc tgaaacaaaa gtcactcgcg aatcgccgcg
      481 taaactcaac tcccgaagat cggaggctta gaaatgatca cgacaatgcg acgagcacac
      541 tcagggcggg ggacttgggc gcggctgtca gtggcgatcg gatgcgtcgt tgcattaatt
      601 gccgccggtc ccgctgccat cgctcgcggt tcaatcgaag caacgagtca caacgaagtg
      661 ccggccttag cggatgacac ggccgccaag attccgccgg aacagcttga ttccctggtg
      721 gcgccgatcg cgctctatcc tgacaacctg ctggcgcaga cgttggtggc ggcaacctat
      781 ccgttggagc ttgtgcaact tcaccaatgg ctgcaaaaga atgctgaaat ggccaaggac
      841 cagaagaagc tggcagaagc ggtcaagaag caaccatggg atccgagcat ccaggcgatg
      901 gctccgttgc cggatcttgt caaacgactt acggacgata ttcagtacac gacggatctg
      961 gggaacgcgt ttctggcaca acagaaggac gtcatggacg cgattcagcg catgcgcggg
     1021 aaggctcaag agaaaggcgc gttgaagtcg aacgagcaac agaaggttca gactcagact
     1081 gtggaaaaca atcaagtgat cgtgatcgaa caggcaaacc cacaggtggt ttatgttccg
     1141 caatacgatc cgcagtacgt ttatccgcct ccagcatatc cttatccgcc gatctattat
     1201 ccgccgtatt accccgggac gggcgccgtg atcgcagcga cggcaatctc tttcggtgtc
     1261 ggctgggcca tgggcgcagc gtggggcggc ggttggggat ggggcgcagg ctggggtggt
     1321 ggcgacatca acatcaaccg gaacaataac ttcaaccgca ataccaacat tcaaggcggc
     1381 aatcgtggcg gtaacagctg gcagcacaat ccgtcccatc ggggtggcgc tccttatggt
     1441 gatcgtggga ccgcgaatcg atttggtgga acaacgcgcg gtgattcatt aggcaatcgc
     1501 cagcgcgctg cacagagaga tattggccga cagggtggca acctcggcag tcagcgaggt
     1561 gacatcggca atcgcggcgg cgttggcgat cgaggtggcg tcgggaatcg tgggggagtt
     1621 ggtgatcgag gtggcgtcgg caatcgtggc ggcgttggag atcgcggcgg agttggcgac
     1681 cgcggcggag ttggaaaccg caatggagtc ggtgatcgcg gtagcggcct gtctaaccgc
     1741 ggtggcgtca gtgatcgcag cagcggactt tccaatcgca gtagttctgg aagcttcggc
     1801 aatcgaagtg gcggatttgg tggcggcagt ggcggcttta gcggccgaga cgccggcatg
     1861 agtagcagcc gcggttcttc gagcatgagt cggggcggcg gttccggcgg tggcagccgg
     1921 ggcggcggcg gtttcggtgg tggtggcggt ggtcgcggcg gcggcggagg cggccgtggc
     1981 ggcggtggcg gtcgtcgacg ttaagaagag aaggagcacg aaaatgaaaa acacaacgct
     2041 tgaactcaaa cgcgcgaccg tacatttttt tattgtcgcg ggagcttcgt gtgcattgtt
     2101 gctcgccact gtcctggtcg cgcaggccca gaacaaaacc tccgctgcca gaggacgtac
     2161 gtttttgacg cctgaacagg cggcagcagc tctaatcgac gcagccgaga aatatgacga
     2221 gaaagcgctg attgatattc tcggccccga cagctacgac attgttcata ccggcgagcc
     2281 cgctcgcgat aaggaaatgg ccgcgcaatt cgcggcgcag gcgaaaattc ggcaaagggt
     2341 aacgaaggcg gctcgcaaca ccaaaatcgc caccttgttt gtgggcgacg aagattggcc
     2401 cttcccagtg ccaatcaatg aacgtcaggg caaatggtct ttcaacacag ccgctgggcg
     2461 gcgcgaaatt ctgatgcgtc gcattggccg taatgaattg gatgcgattg agatttgtcg
     2521 caattacgtc gacgtccaac acgaatacgc gctcatgaag aagaccgccg gcgtcaacca
     2581 atacgctcag cgaatcgtca gcacggatgg tcagcaggat gcgctcgcgt ggaagaacgc
     2641 ggacggcacg tggggtggac cattgggcga agaggcggca gccgcgctca gtaagggcca
     2701 tcagacaggc cagccctatc acggttactt cttcaaagtg ctcaaagggc agggaccggg
     2761 ggcgccgttg ggtgagctcg attacgtgat taaaggggtg atgattggcg gcttcgcgct
     2821 gatcgcgtct ccggcgcagt atcgcaacac cggcgtcaag acgttccttg tcagccagga
     2881 cggcgtcgtc tatgaaaagg acctcgggcc caggaccttg gaaattttcc agtcaatcga
     2941 tcggttcaat cccgacccta cctggaggcc ggtattggat aaggacaagt aaggatgagg
     3001 tcagtacagg gagcggtagc tacctggtaa ggcgtttctg tgaaatgggc cgttggtgtt
     3061 aacgcattga ccaacggctc tgctgcgagg cggcccggcg agaggtgttg gctcctcttt
     3121 ttcgccgggc tcgctccgcg gtcaattccg atcgtgcttc caggcgggcc aacttctaaa
     3181 ggcaacagcg aatttgcggg ggcaaatcag ccgggctgct ttcccagtcg cgcgtattat
     3241 tgagctggtg ggtgagcttg gcggcgactc ggccaagcgc cccggcataa gtgggaaatg
     3301 aaagcggcac ctgggccagg tcatctacgc gcatccgcgc cgcgatggct acggcagcaa
     3361 cctgggcgat gtccaccgcc cgttcgccaa ttacatgaca accgagaatt agccgtgttt
     3421 cgcgatctac gatcagcttg cagaagccgt aggtccggcc atcgataatc gtccgggtag
     3481 tcgagtcaaa gcgaatcgtc gccgcagcaa tactgtgttt ttcgcgagct ttcgcttcgg
     3541 tcaagcctac ttgcgcgtat tccggatcag tgaaactgcc aaccggagct acgcgatcgc
     3601 caatcgtcat ggttagaccg cggaccgcat tagtggccgc gacaaatccc tgctgaattg
     3661 cttgtggcac cagcatcagc aagccggtaa cgtcgccggc ggcaaagata ttttgagacg
     3721 atgtccggag gaactcgtct actcgaataa acccgcgcgc gtctgtttcg actccggcgg
     3781 tttcaaggtc cagctctgca gtatctgctt tccaaccaat cgcgcatacc gccaggcttg
     3841 cttccacgct ctcgcgccgg ccgtttttgg agaaccacat cctgacaccc gccggcgtct
     3901 tttcgaacga gtcaacggtc ccaaagtttt ctctcaccat cacgcctgaa ttccgaaacg
     3961 catccgcgac tgccgttgaa acttcttcgt cctcggtcgg taggatgcgt gggccggcct
     4021 gaaacaattg aatctttgaa ccgaaggcat tgaaaaccga agccacttgc acgccggtcg
     4081 cgcctgcgcc caggaccagt atcgacgcgg gaacagaagt taacgtccag gcatcactgt
     4141 ggatagcggt gaattcggcg ccaggaacag tgagttggcg gcttatgccg ccagtgcaaa
     4201 ttacgatctt ggcggcgctc agtcgcagcc cactctcagt tttaacagtg tgcggatcaa
     4261 ggaagcgagc gctgccggaa ttttcatgga ccgtcacgcc cagcgagtcg atctggctgc
     4321 gaaaagtcga gttcgcccgg acgtctttaa cgacgtcacg cacggtggcc aacagcgtgg
     4381 caaagtccaa ccttggttcg cccacgacga ttccgtatct gccaagctgg cgggcgtctc
     4441 ggatcaaacg cgccgcgtgt gcgagcgtgc gcaccggaac tggcccgtca ttggcggcca
     4501 tgccaccgaa ctggtcgcgt gtaaccagcg tggtcttcgc gcccgcatcg gcggcgcgaa
     4561 acgcggcaac tactccagcc ggcccgcctc caattattaa aacgtcgctc atctgaagta
     4621 acgccgcgga cgcggccctc aaggcgcggc ttcacgcttg cttcgcaggc ggcgcacgat
     4681 tcgatttacc ggacctcgga ccatgagata aggaactacg gccagcagaa ttgcaaccag
     4741 gatcaactcg agggggtaaa tccaccgcag gaagatcaat tgataaatta cgtccatggt
     4801 gatcgcgaga acaaacacgc gcgcgatgga cttccatcct tcgcgcaaga gatccgcgcc
     4861 ctggcgttta tccgtgagaa ctgtccagaa ataagcaggc cgatccgtgc gcgcatcttt
     4921 taatccggca cgaaaggcaa gcagcgcggc cataagtggt tgaagaatca cccgaaacgt
     4981 cattggccca ccgacgcgag ccgtcaggtt catccatcca cgaatgagca tgtctctcat
     5041 ttcaagatgc tcctcattga tctagcgggt gactctaaaa gcctaaacat aattgctgct
     5101 ctcgccgcag agccgcgaaa tgtttataga caagtgcccc aaagaacccc gcctcgctcc
     5161 ggaggagcga aatgtgcttt tcggaaaccc aacgtttcgc tcggcaacga gtgcgagaag
     5221 cagcactcgc aacgcggttg atacaaatcg ctggggcatg atgatcatcg cttcgtctca
     5281 tgtgtccagc tcgctcaacc accgcaaggc tcgcagtccc ggcatgaagc aatattcacc
     5341 gccgcgggtt attacgaatt gcgggatacc ctgaaagcgt ttgcgcagcg gcttgcgcgg
     5401 cagcgtgaag ttcactccgt tcgatccagt gatcggatcc ttatcatcgt cggcgccaaa
     5461 gaagactccg tcgttaatcc attgagactg cacgaactca aactgccgtc taaggcttgc
     5521 gccgacgaat gcgaacatca agccccggtc ggcgccgtca tcatcgagaa ccccttcagg
     5581 aagcaaagga ccatatgcag tcccgcggcg aatcattcga tgaattcgcg ccacgcctgc
     5641 aattgaagcg tcgcgcggat tgcagcgccg aatatgcgag ccgccaggtg ttttcaatcc
     5701 ggttggatcg tcggcttcaa acaggaaagc attgttgcgt ttcgcgtcgg cgcccagctc
     5761 aggatcatcg tgcattggac agagggcgag cggggcgccg ctacgccagc ggcccatcat
     5821 cttcgctgcg agtagttctt catcgcctga gccgttcgaa ttggcgttaa ggtacttgcg
     5881 gaaggcggcg acgcgttgat gcagcttgcg aaacactacg taggtgccat ttcgtccgag
     5941 aatctcaggc tcggttttct ggatgccgcc catctcatca acatatccga ggacaaactc
     6001 gccggccttc agcggcttct cgtggggatt ggatccggga ataccactgc cttcgatcgc
     6061 tggatggctg atcccgtcgc ggaatccaaa aggctctttc tcgttgggaa gcgcgtgaca
     6121 atcctgacgc cagatcgccg ttattcccga catcgcacga taggcttcgc gcgcgcggtc
     6181 taaagcagcc tcaagccttt ccgagtcggg cgaaaccgcc actagcacca cgtgaagatc
     6241 cgaactgccc agcggctgtt cccatttgcc gggatggctc tcgcccgtgt cacccaagtc
     6301 cttatgacgg gccgccattc cctgacgaaa ttcccaggag aagctgttaa gcgattcctg
     6361 cgggacgccg agcgctttca gaccctgata ggttaaagcc acgctcaccc aggtatcggc
     6421 cagaggactt ttgggattgg ccgctgaagt aacgacctgt gaaacgcgac gcatcaactc
     6481 gcgcccgact ttgcgatcat caatacgaaa agcgatgtag gtggcgacgt aaggagaggg
     6541 acgcggccga agcacgccgc tttgaatgtc gtcgagttcg agcatcgctt tcaactacca
     6601 accaaggtga tcaatctgaa cgtccgcagt acttaccaag tcagcgctcc gtcccgatca
     6661 catcgttgcc aaattcttcc aaaagttctt caagctgtcg gtcccgccaa acaacgtcgt
     6721 gaaattggtt gagtcaacca tcacgatgtc acccgcacgg tcacctgccg gtggcagcca
     6781 aagcaaacag ttaaattcgg tgttgccttc agccgtgaac gggtgcggtc gcttagggtc
     6841 gatcggctgc cgtgccagca cctgcacgtt gttcccgcga ttgttcgtca gctcgtaatg
     6901 agggaggtgt ggatgaaagt tgagtgtggg aacattcgcg agcagctcca gcttgtcgag
     6961 atccctgaac gaggtcagtg gcgcaatatc gcgcgtccct tcgaccagcg ccggccgcag
     7021 accccaacga ttccagacgg gaatctccaa agctttgagc aatgaacgcg cgtacgagct
     7081 gaaccgctgt tgccgcggca ccagcgcatc accgtgatgc tcgtattcca cctggcgctg
     7141 ctccggatcg tcagtgaagc ccacatcatg atgaggagcg agaagcaaac aagtgccttc
     7201 acgccttagc cactcgttaa tggcttgtac ttcttccggt aaagcttgct cgcctgaggc
     7261 gagatgatcc agtccaaaca cgaggagcgt atcgcagtca tccagaatgc gctcatcaac
     7321 ggggtgcttg tatcctgcct gatcaatgcg ctgaaagacc gccaccggat gtccagtcgc
     7381 gtcgccggcg atctcctgaa agctcaacgc cgagcggtga aacagttcca aagtgcccgc
     7441 gataccctga aggaattgcg cgctgcccca ctcaggcttc tcgtaattcg gccacgccac
     7501 tctgcgtact tcggtcatgg tcgaaaaccg attctccagg tccgtcagat cgcgttgtga
     7561 ttcccaggcg tagctccaac tccagtagat actcagccgt cgcttgccgg gtgtgtattt
     7621 ccgaggcaca tgattctggt tgtaggtgcg cgcaatcttt gcgtcgctca tcctgtctcc
     7681 tttcaataag ccagtcgaac gagttcttct taagccaact gatccagcat ctcggacaat
     7741 gaatgcttgg ccttcaaggc cttcttaatt tcgtcggcgc tgaagaaggg atactcgccg
     7801 tactcaagga aactcgggat ctgatgtgca cgcacaaatt ggacgaagcc ctccggatta
     7861 gtctgccaat ccatcgggaa gtcctggagg ttctcgaaca ccgtcctcac gccggccgcg
     7921 ccgaaaaggg cgacggcatc ttcggtgtac ttgtcgaagt cggtatcgaa gattccctgg
     7981 tacataaagt aggtttcgcc gtttatcggg aacagcagcc aacgcagata atgcagtttc
     8041 agcggcgcca gcacatcggg ctgggccttg actgccgctt cgatgttctt cgcgtattca
     8101 tgaaaaacgg gttcgcgtcc gggaatgatc ttcgccagga tcgagaagcc gtagcacgcg
     8161 ggcgtcttcg gataaattgg accgtacttg ccgttctcaa gatcgctcac tgcggggatt
     8221 gccattgcct ggggtctgat ttccatcgtc gttgctcctt ttcgtcggta acagccgccg
     8281 ctgatgctct tatcaaaacg gtactttggt gaaaatctat atcgctaagc agggttctaa
     8341 cactgttatt tttgtcaggt tctgagcgga ctctcgacga gtttgagggc aggagtgtgc
     8401 cccgattaca gcctcgtcca ttaatgcaac ctacatcgac tggcaaaact gacagtggta
     8461 ccgccatgcc cgcattgtta ggttggaaat tgtcgcaaga ctaaacaaac gactcggagg
     8521 aaattctgat gaaaagattt ttaacagtgg cagcgctgat caccgtcctg gctcaggggg
     8581 catttgcgca atccgacgac tacaaaaagt gggagttctt cggcggctat tccgcgttgg
     8641 gatttgacac tttggccggc aataccggca gcccggttgt cgatgaagtg ttgggcgggc
     8701 gaaacattct gcgcgggttc gagctctcgc tgactcggaa tattcacaga tatgtcggag
     8761 ttaagggtga ctactcactg catctgcgtg aggacaactt ttcgcggccg gcaggtagcg
     8821 gcacggtaga tacatcggtt cagaatttcc ttgggggctt gcagttcaag gacaatgcgt
     8881 ccgaggctcg gttcaagttt ttcggacacg ccctggttgg agtcgcggtg caaaaggttg
     8941 atgtcgacag tcccgatctc ggcgcggttt tcggtgtcag cgatttcaaa acgaacgaaa
     9001 ccagctttgc gatggccttc ggcggcggcc tcgatattcg actcaacagc aagatcgata
     9061 ttcgggcggc gcagattgat tggaatatta tcaaccgggg cgatcaacag accgggatcg
     9121 tactaactcc cactccgttt cagacggtgg ggactccttt cttcgttccc ggctcgagac
     9181 aggataactt gcggctaagc atcggcatcg tgattcgcta ggacaacgtg tcgtcagggg
     9241 ccgtctgcgc ggagtacctg cggcggtcaa cgtcgaccaa gtcctggaca ctacgtgcgg
     9301 atcacattca aagcgggaga caaagcgttg cgcaaactgt tttcgcgaca aataagcgga
     9361 cgatttcgaa ggtgcttgac gattgtcggt gccacggctg gctgcgccgc gattgtcatg
     9421 gcgatcgcag tagccggttt agcggccgcg caacaacctg cttcgctggt cgccagcgcc
     9481 aagggcgaag gaaagatcaa acttggaaaa gaagaattca agcttgatgg agtagtagta
     9541 aagctgttcg aagatggcaa agcggaactc aatctgatca ctgacatcac ggtcttcatt
     9601 accggcacct ggtcgcgacc gtccggcgac gacaaaagca tcgacataaa aattacgggg
     9661 aacgtgaccg cgaggaacct gaatggtgac ggcaagattc tgctcagtga tgaccgccaa
     9721 tcgatcgtgg gtttgaagct ccagctgttt aataaagtca gccgaaaaaa catcacggct
     9781 gagttccttg ccaaataacg tccactcaat ctcaagttac aggcagccag ctaaaggacg
     9841 tctggattcg ttccgggagt gagttaggcg ggtgcgttgg cgcgacgatt tacttttccg
     9901 tcgctctcca actgacaaac cgcgtcactg tcaatagtga cagtatctcc cgggcggcca
     9961 gctcacctac gatttccgtg gtaaggatcg gcgcggggag gaacggccgc gtcggtgcag
    10021 ggaggaacct accgcgcgat ctgtgtgcca gtaagagcgc gggcaatgcc tcctaagggc
    10081 cgagtcgggg gtgtctcggc cctttccttt tgaactaagt cgagaagcga tgactccggc
    10141 aaacatcttt tcccgccctg taaaaactga cagttagctg ggtgaaggtt ccaacttagc
    10201 attgctgttc ggttcgccag gtacagctaa tcattcactt acttatgaaa aagttcctaa
    10261 ttctattggt gattgccgcg actctcggca ccgcccatgc ccagaaagta aaagtggcgg
    10321 ccgatcctgg cgtagatttg tcgaagtaca agacctacgc ctgggccaaa ggagctgcgg
    10381 cggccaatcc catcattaac cagttgatca aggacacgat tgatcagacg ttgactgcaa
    10441 agggtctgac tcgggtgact gatgaaccgg acataacgct ggtcgcttgg acggcggtca
    10501 attcggattt gcatcttttt cagccgactt ggggccggtc ggtcggcagc gcaaccagca
    10561 gtggtattcc agcaaccgtg cacagcgctg ctatagcgaa cggagcactg gtcgttgaca
    10621 ttgctgacgc gaggacaaaa gccactgtgt ggcgcggaac tgcgacgcag acaattaagg
    10681 aaactccatc agggaatatg gctcaggatg ccaagaacgc cgaaaagtct attcggaagg
    10741 ctgtagagaa aatgttcaag aaatttcctg cgccaaagtg agcggggaac cgccaggccc
    10801 gctaacggaa gacgagttac cgttaccgtt cgcggccgtg gctagaaaag ttgaaatggc
    10861 ttgctttcga tcgcagcgca ggctgctaag gcgcccatga gcaaggcgtc tcctccgcgt
    10921 ctgagcatgt cacttgagcg gcatgctcag acttttttta gtgattggca acggtgaggg
    10981 ttgacatgag aaccaagaga ttaatttggg tgactggttt cgcagtttta ctgcctaccc
    11041 tgacgcttac tactagttca cgttcgaaca gcggggatct tgccagtgaa ctcaacgcgc
    11101 cttacacgat tcaagcgcaa gcaatgggga cgtcgaccca gctggggcgc aactacaaca
    11161 tcactgcgcg ggtcaaggaa tactcgccgc cggaggatca ggcgattttg ctcgaggctt
    11221 tcaaggcgaa ggggaatgag ggcctggtta atgcgctttc aaagatgccg gcgaaaggcc
    11281 gcctggcaat caccggcacc ttgggcggcg acctcgccta catccgccga ttcgaccagc
    11341 ctgacggcag catcatgctt cgcatgatta caaatcgact gctgcgcttc ggcgaagtct
    11401 gggccgactc gcgttcaagt gactatcaac tctcgggcct cgagatagtt tttaccaagg
    11461 acggaaagag cacaggtacg ttaatccccg ccgcgcagtt gaagctcgac aagcaagagc
    11521 gcattgggat cgaaacgttt cagtggccgt ggaacctggt gaatattcaa atccgctaga
    11581 cctgtattag tagggcgccg gccgctcaac gccattgatg gtttttcatg agatacgaca
    11641 cggcattttc cgaaggccaa cacgtcaagt tggatgatga gctgcccaag ccttactcgt
    11701 ccctcgtcgc ggttgacgtg tttgccatgt ctcaccaggg acacgtcaag agcaataacg
    11761 aagatcactt cctggtaatc agaggcggcc gcgcgcttga gacagtgtta acgaatattc
    11821 ctcaaactcg ccccggcgac ctttttgaag agaccgccta cggactaatc gtggccgacg
    11881 gcgtcggcgg agaggtcgcc ggcgaagtag ccagccgcca cgcgatcttt acgtttctga
    11941 atctggcact ccgcacccct gattggcaag tccgctgggg atcgaaagag aagaacacgg
    12001 tcatgcatcg aatgcaggat cgttttcgtc gcgtaaatgc cgcgttgctt caagaggcga
    12061 ctgccgattc ggtgctaaca ggaatgtgca cgacgatgac cgccgcgctc acgcacggct
    12121 ccagtctcat tgttgcccac attggcgact cgcgcgcgta cctttggcgg cgcggtcact
    12181 taaaaaggtt gacgcgcgat caaactgtcg ctgaacgcct gaaagacgag ctaaagagcg
    12241 acgatgaaga tccacttcta ctggagctga gaagcgtctt gttacaggcg ctcggatcga
    12301 accgaaatga atgccgcgtg gaggttggcg attttgtgct cgagaacggc gactgcttat
    12361 tgctgtgtac tgacgggctc acggacatgg taagtgaaac ggaaatccaa tccgtgttgg
    12421 ccaaacgatc gtccgcaaaa tcggcctgca ggacgctggt tgatctggct ttggcgaatg
    12481 gaggccggga taacgtgacc gccattgtgg cccgttactc aatcccgcaa acataaagac
    12541 cggcccccga tgcccatttg gctctatcaa actcatccac tcttcaccgc aattatcttg
    12601 attgcgttca ttgagacggt tgcgctgatt ggcctctttc tcaccagaaa gtttgtgttg
    12661 ccgcggttcc gctacgacgc tgaagtcaat gatgccgtca gcggttcggt gcaggtgatt
    12721 ggcgtcttct acggaattac cgtcggttta attgccgtcg gcgtttggaa cagtcattcg
    12781 agttctgccg aactggtatc gaaagaggct gcctcgatcg gtgcgatgca tcgggacctg
    12841 ggcggatacc cctcgccgat caaagaagag ctgcgcgcaa agctgcgcga ctacacagtc
    12901 ttccttatta atgatgcatg gccggcccaa aaaacgggcc agggactttt cgtaaaccgc
    12961 ggcacggcgg tgctggatga atttcaagcc tcgctcttcg cgttccaacc agctaatccc
    13021 gcgcagcagg cgcttcactc agagacactg cgcgcatata acatcctgat cgattatcgc
    13081 cgtctgcgaa ttgacgccgt gaatcagggt ctgtccggag tcatgtgggc ggtgatttgg
    13141 gtgggcgcag tcatcagcat tggcgtggcc tacctctttc acatcgaaga cccaaagata
    13201 catttcattc tgattgggtt aatggcgggt tttctagcgg tggtcctttt catgatcatc
    13261 gttaatgacc ggccgtttta tggttacgtc agcctcacgg ccgatccgta caaaataatt
    13321 ttagatcgcg tactcgacct atcgaagtag cagcgcgtga tgcgagaaag aaactttgag
    13381 aaagaaactt taaggggtca tctgatgcag gatctgttaa ctaaagcagt tggagtcact
    13441 ttggtatcgg tggcgctcgc gagcgttacg ttcggccagt cttcaccgga cgcgccgcga
    13501 aatgaaatcg aggttcgggg cgtggtttcg gtgccctcgg gggaagccaa tttctcaggc
    13561 acaaccaatt ccggatcgac cctggacttc aatcgagatt ttgattttaa gaacgagctg
    13621 ggcttccaga tccgttacac caatcgcagc gagaataaga aacacaaaat tgtggccagc
    13681 tacgaaagca gcagttggga tcgcagcacc acgttgacgc gcagctttgt cttccgcggc
    13741 gagacttacg tcgccaacgc aaacattcag ggggacctta aactgagaac gtttcgcgca
    13801 atgtatgcgt atcgttgggg caacgataaa attcggtttg gaccgatggt cgatatgggc
    13861 gtcatctccg cgggcctcga tctggccgga acgacgaaca acggaaccag gacgactgag
    13921 ggctcggtca caaagttcgc ggccaccgtc ggatacgatc tcgactatga tccggcgccg
    13981 aacgtgaaca tcttcaataa cctcggcgtg attgctttcc aaaacgatcg cctgtttcac
    14041 actgagggtg gcgtccgata ctacccggcg cgacagttcg gcgtggtggg aggctaccgg
    14101 tatcaacgtt atcgctgggt cgacgataac gacttcctga gaatatccgc gcaaggcccg
    14161 ttcttcggcg gcatctttcg tttctaaatg cgcgcgtttg ctcgtcacgg caggtgacct
    14221 gttcctttac ccaacatggt aaagaattcc gcacgccggg atccggcctc actgcgctgg
    14281 tagttttgac agtgacagcg cttccagatc gtatttaata ctgagccgaa aagtacagcg
    14341 gaattagttg cctgagcgcc tactcttcaa gcgccgtcca ggcagtggag gacgagcagt
    14401 atgagacgcg gtttgtacat tgagcgacga cccggcatgc aatccacgaa catgagttgg
    14461 tttcggatcc gaaagtcgag agcgctggcg agcttgttgg ccgtggtgat gctcacggct
    14521 ccggtccctg tttgggcgca agctcaaaca tctgcggaca aaccgcgaat cgaaaaagat
    14581 ctactgggtg aaaaagagat ccccgcgaac gcctattatg gcgtgcagac cgcgcgggcg
    14641 ctggaaaatt tccagctctc cggcgtatcg atcagtcact atcccggatt catcgaagca
    14701 tgggccatcg tcaaacttgc ggcagcgcga gccaacaccg acgtgggcgc gatgaaaaaa
    14761 gagcggctgg atgcgattga gaaagcttcg caagccctgt tggccgggaa ataccacgat
    14821 caatttctcg tcgattggta tcagggcggc gcgggaactt cgaccaacat gaacgcgaac
    14881 gaagtgatgg cgaacatcgg cctcgagtta accgggcgca agaaaggtga gtatcaccac
    14941 ctcgagccgc acgacgacct gaacatgtcg caatccacaa atgattcata tcccacggcg
    15001 ctcaaggtgg cgatcatcct tcgtaacgac aagctaatcg ctgaattgca gaaattggtc
    15061 gcgtcattcc gcgccaaagg caatgcctac atcgagatcg taaagatggg acgcacggaa
    15121 atgcaggatg cggtacccat gaccgtcggg caagaatttc acgcgttcgc tgcatcatta
    15181 gaagacgaga ttgggggact cagagacgcg gagaaatcgc tctatgcggt aaacatgggc
    15241 gccacggcca tcggcaccgg aatcaacgtg ccgaagggtt atcccgaaaa gtgcgctgcg
    15301 catctggcga agttaacggg caagcctatc gttccggcgt cggacatgct cgcggcgacc
    15361 tgggaccagc gaggttttgt cgcctattcg gccgcgctta agagtgtcgc gatcaagctt
    15421 tcaaagattt caggagacct gatccttttg gcttccggac cgcgcgcggg attggctgag
    15481 atcgacctgc cggcacttca gcccggttcc tcaatcatgc cgggcaaagt taatccggta
    15541 gttccggaag tgatgaacct ggtcgccttt cgcgtgatgg ggaatgacta tgtgacgaca
    15601 ctcgcggcgc attcgggcca gcttcaactg aatgcgtacg agccgattga agggctctgc
    15661 attattgagt cgcagcatct gctcttcaac acctcgaagc tgtttcgcac aaagtgcgtt
    15721 gacggaatca cggtcaatga aaaggtgctg gctcgctata tggaaacgac cgtcggcatc
    15781 gtgaccgcac tgaatccgat tgtgggctac gagaaggcga ccgaattggc gcaggaagcc
    15841 tacaagag
//
LOCUS       DATDBY010000022         2688 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_995691, whole genome shotgun sequence.
ACCESSION   DATDBY010000022 DATDBY010000000
VERSION     DATDBY010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_995691"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1195)
                     /locus_tag="VIT19_00510"
     CDS             complement(<1..1195)
                     /locus_tag="VIT19_00510"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY5837482.1"
                     /translation="MKALGNGSLVSRAVICAFIFLLAFSVRSLTWHDTRFEVGKVQSS
                     VAADYQRVAELLRQEGIGGFFSSSSSLADLNNLGHPPGYSILIALVRAIFGSSNAAVQ
                     FTQILFDSFAAVLLFLIVLELFSLAPATIAGLFAALSPQFAWNSVLLLPDSLATFPIL
                     LGVFLLARSRAKPRLATFVIIGALVGLSCWLRANAMLLTVFFATAVFLLHGKKQWRYS
                     LAVIAGTLLIVLPLTIRNAIATRHFIPVSLGAGQTLLEGIADYDPNNRFGIPNTDMGI
                     MKQEAEMFQRPDYYGTLFNPDGVQRERARMKRGLGVIASNPVWFASVMARRAASMTRL
                     ERTRLISNTPTVTNPFETANLSPVVAPTTTQHLESCRPQSSEQKAVFELANPKALILT
                     GNNQKY"
     gene            1352..>2688
                     /gene="asnB"
                     /locus_tag="VIT19_00515"
     CDS             1352..>2688
                     /gene="asnB"
                     /locus_tag="VIT19_00515"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HEY5837483.1"
                     /translation="MCGIAGLIDSNPEARIGAMLKAIEHRGRDDEGVWTSSAINDEGQ
                     RVCFGHRRLSIIDTSSAGHQPMLSHEGRFVVILNGEIYNYRELRTELTAKGHQFRTHT
                     DTEVLLAAWAEWGEKSLDRLNGMFAFALWDNKERALFLVRDRVGIKPLYYFCGQDARA
                     PGRPLAFASEIKSIIASGLIKPELDHESLHQFMTFLWAPDPNTLFKDIRTVPPGHFVK
                     VLNGNTTVHEWWDISFDEIEEGRDDAWWQERVLETLHRVVKLEMVADVPLGSFLSGGV
                     DSSSIVAMMKQHSNGRQVGTYAIGIEAEDLRYDIIPDDVKWARRVNQQLTTDYHEIML
                     KPEVAELLPMLVRHMDEPAIDMAIPSYLISRAARESMRVMLSGMGGDEVFAGYPRQMA
                     MKLAGAFDPVPQLLRRPLMRTVAAVLPGGMPGRLTAPLRNAKKFARSAALEFQ"
BASE COUNT          638 a          739 c          772 g          539 t
ORIGIN      
        1 catatttttg attgttgcct gtcagtataa gcgcctttgg gttagcgagc tcaaacacgg
       61 ccttctgttc ggaggattgg ggacgacacg attcgagatg ttgcgtcgtc gttggggcga
      121 caaccggcga caaattagca gtttcaaatg gatttgtgac ggtcggcgtg tttgaaatca
      181 atcgcgtcct ttccagacgc gtcatcgagg cggctcgtcg cgccatcacg ctcgcaaacc
      241 acacagggtt cgaagcaatc acgcctaagc cgcgcttcat ccgtgcacgc tcacgttgaa
      301 ctccgtcagg attgaataac gtgccgtagt aatccggccg ctgaaacatt tcagcttcct
      361 gtttcatgat gcccatgtcg gtattcggaa ttccaaagcg attattcggg tcgtaatccg
      421 cgatgccttc aagcagagtt tgcccggcgc cgagcgagac cggaatgaag tgtcgcgtcg
      481 caatcgcatt gcggatcgtg agcggcagaa caatcagcag cgtgccggca atgacagcca
      541 gcgaataccg ccattgcttt ttgccgtgaa ggagaaacac ggccgtggcg aaaaacacag
      601 tgagtaacat cgcattggct cgcagccagc acgaaagacc cacgagcgcg ccaatgatga
      661 cgaaagtggc cagcctcggc tttgcccggc ttcgcgcaag caaaaacact cccagcaaaa
      721 tgggaaatgt ggcgagcgag tccggcagca gcagcaccga attccatgca aactgtggtg
      781 agagggccgc gaataggccg gcaattgtcg cgggcgccag cgaaaacaat tcgagcacga
      841 ttagaaagag cagtacggcc gcgaagctgt cgaaaagaat ctgggtgaat tggaccgccg
      901 cgttcgaact gccgaagatt gcccgcacca gcgcgatcag aatcgagtat cccggcgggt
      961 ggccgaggtt gttcaaatcg gccaaagatg aagacgagct gaagaaaccg ccgatgcctt
     1021 cctgtctcag aagttcggca acgcgttgat aatcggcggc gacagagctc tgtacttttc
     1081 caacttcaaa acgagtatca tgccaggtca gtgaacgcac gctgaacgcc agcaggaaga
     1141 tgaaagcgca gattaccgca cgcgaaacta ggctgccatt acccaaagct ttcattcaca
     1201 cctcgcttca gcgaggtgta ccagattgaa gtccaactcg caaagtcgtt tcaacggctt
     1261 accgcaaaac cgctaaaaca gttctcgaat tagaatgcgc tttgtgtcac cttgccgaag
     1321 caaggtgtga atgagaacct tctgctaact catgtgcgga atcgccggcc taattgactc
     1381 aaatcctgaa gcgcgcattg gcgcgatgct gaaagctatt gagcatcgcg ggcgcgacga
     1441 cgaaggtgtg tggacttcgt cagcgatcaa tgacgagggg caacgtgtct gcttcggcca
     1501 tcgccgcctg tcgatcattg ataccagcag cgccggccat cagccgatgc tctcgcacga
     1561 aggccgattc gtcgtgattc tgaacggcga aatctacaac tatcgcgaac tccgcactga
     1621 actcacagcc aagggccatc aatttcgaac ccacaccgac acagaagttc ttctcgccgc
     1681 ctgggcagaa tggggtgaaa aatctctcga tcggttgaac ggcatgttcg ccttcgcgct
     1741 gtgggacaac aaagagaggg cgctattcct ggtgcgcgat cgcgtgggca tcaagcctct
     1801 ctactacttt tgcgggcagg atgcccgcgc tcccgggagg ccgctcgcat tcgcctcaga
     1861 aatcaaatcg attatcgcca gcggcctgat taagcctgaa ctcgatcacg aatcactgca
     1921 ccagttcatg acgtttcttt gggcgcccga tccaaacacc ctcttcaaag acatcaggac
     1981 ggtgccgccg gggcatttcg tgaaagtgct gaacggaaac acaaccgttc atgaatggtg
     2041 ggacatttcg ttcgatgaga ttgaagaggg aagagacgac gcgtggtggc aagagcgggt
     2101 gttggaaacg cttcatcgcg tcgtgaagct cgagatggtg gccgatgtac cgctgggctc
     2161 gtttctttcg ggcggcgtcg attcgtcatc gatcgtcgcg atgatgaagc aacacagcaa
     2221 cggccgacag gtaggcacct atgccatcgg catcgaagcg gaagacctgc gttacgacat
     2281 cattcctgac gacgtaaagt gggcgcggcg cgtcaatcaa caactcacaa ccgactatca
     2341 cgagatcatg ttgaagcccg aagtcgccga gcttctgccg atgctggtcc gtcacatgga
     2401 cgagccggcg atcgacatgg cgattccgag ttacctgatt agccgcgccg cgcgcgaatc
     2461 gatgcgcgtg atgctgtccg gaatgggcgg agacgaggtc tttgcgggtt atccgcgaca
     2521 gatggccatg aagcttgccg gcgctttcga tccagtgcca cagcttctgc gacgcccgtt
     2581 gatgagaacg gttgccgccg tgctgccagg cgggatgccg ggccggctga ccgcgcctct
     2641 gcgtaacgcg aagaaatttg cgcgcagcgc ggcgctggag tttcagga
//
LOCUS       DATDBY010000023         2912 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1392571, whole genome shotgun sequence.
ACCESSION   DATDBY010000023 DATDBY010000000
VERSION     DATDBY010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2912
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1392571"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..335
                     /locus_tag="VIT19_00520"
     CDS             <1..335
                     /locus_tag="VIT19_00520"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837484.1"
                     /translation="RAALTSSDSKPILFYSQASNSSASIDLNVLHNDFEPTAFQLEPE
                     IERAKVALLKSGARAAMLSGSGSAVFGIFENQDAQERAIQAIELETGWRAFPCKTVGR
                     NDYRRALG"
     gene            361..435
                     /locus_tag="VIT19_00525"
     tRNA            361..435
                     /locus_tag="VIT19_00525"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:393..395,aa:Gln,seq:ttg)
     gene            520..1467
                     /locus_tag="VIT19_00530"
     CDS             520..1467
                     /locus_tag="VIT19_00530"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016445698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEY5837485.1"
                     /translation="MSTTGGIKVFSGNANRALAKEICHELHCDLGSAQTARFSDGEFN
                     FQIEENVRGADVFIVQPTCPPTDSHLMELLVMLDAFRRSSAERLTAVLPYYGYARSDK
                     KDRPRVPIAAKMVANLIRTAGADRIVTMDLHAAQIQGFFDIPVDHLYAAPVMIRHYQE
                     NPMPNLTVVAPDTGGAERARAYAKRLGAELALCDKRRDKPNEAEIMNVVGDVQGRNCL
                     IVDDMCDTGGSITKVAKALKKAGAERVHACFTHPVLSGRAAMHLEASDIEQIVVTNTI
                     PLNSKAAELKNITVLSIAPLLAKAIKSIHEETSVSSLFV"
     gene            1619..2293
                     /locus_tag="VIT19_00535"
     CDS             1619..2293
                     /locus_tag="VIT19_00535"
                     /inference="COORDINATES: protein motif:HMM:TIGR00731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HEY5837486.1"
                     /translation="MAEKKDIVIKAQAREGRGKNDSRRARRNGQVPVVIYGGQGESVA
                     ALAQLSELAAILRSDTGRNTIFTVDVEGVGASEVMFADRQIDPVRMRLIHADFKRLVK
                     GEKIEATVPLRLVGEPIGVREQSGMLEQIVRNIDIRCEPREIPEHIDIDVTNLGVHEV
                     LHVSDIPVAAGIEILESPDTVIATVGVVKEEVVEVAPVEGEVPAEPEVISKGKKEDEG
                     EGEEAK"
     gene            2361..>2912
                     /gene="pth"
                     /locus_tag="VIT19_00540"
     CDS             2361..>2912
                     /gene="pth"
                     /locus_tag="VIT19_00540"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF013368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEY5837487.1"
                     /translation="MRLIVGLGNPGEEYKWTRHNLGFMLIDKLAAEADVTVKRRDCRS
                     LVGSAVIGGERIRLVKPQTFMNLSGEAVACLLAKENVDETSQDLIVISDDLALPFGTI
                     RLRERGSAGGHNGLKSIISTVGTNEFIRLRMGIQPDHPVSDAKAFVLEDFRKPQRDEV
                     EKILARAAEAVHSVLRDGIRKAMS"
BASE COUNT          667 a          713 c          916 g          616 t
ORIGIN      
        1 atcgggcagc cttgacatcc tcggactcga aacctattct gttttattct caggcgagca
       61 actcctccgc ttcaatcgat ctgaacgtgc tgcacaacga tttcgagccg actgcgtttc
      121 agcttgaacc ggagatcgaa cgtgcgaaag tggccttgct gaaatcagga gcgcgcgcgg
      181 caatgctcag cggcagcggc tcggcggtat tcgggatttt tgaaaatcag gacgctcaag
      241 agcgcgccat tcaggcgatc gaactcgaaa ctggttggcg cgcgtttcct tgtaagacgg
      301 ttgggcgcaa cgactatcga cgcgcgttgg gatagggggc cgattgttcg gcgagaatgc
      361 tggggcgtcg ccaagtggta aggcaccggt ctttggaatc ggcattcgta ggttcgaatc
      421 cttccgcccc agccaatttt tcacgtagca cagacttcag tctgtgaatc aaagcgtgag
      481 gattagaact cacagactga agtctgtgcc actgacttaa tgagcaccac cggcggcata
      541 aaagtctttt ccggtaatgc gaatcgcgcg ctggcaaaag agatttgcca cgagctgcac
      601 tgcgatttgg ggagcgcgca gacagcgcgc ttttcggacg gcgagttcaa ttttcagatt
      661 gaagagaacg tgcgcggcgc ggacgttttc attgtgcagc cgacctgccc gccgaccgac
      721 tcgcacttga tggagttgct ggtgatgctt gatgcgttca ggcgttcatc ggcagaacgt
      781 ttgaccgcgg tgctgcctta ttacggttac gcgcgttcgg acaaaaagga tcggccgcgc
      841 gtgccaatcg cggcaaagat ggtcgcgaat ttaattcgca ccgccggcgc cgatcgaatt
      901 gtgacgatgg atttgcacgc cgcgcagatt caggggttct ttgatattcc ggtggaccac
      961 ttgtacgcag cgccggtgat gattcggcac taccaggaga atccgatgcc gaatctgacc
     1021 gtcgtggcgc cggatacggg cggggccgaa cgggcccggg cttacgcgaa gcggctgggt
     1081 gcggaactgg ctctctgcga taagcgccgg gacaagccga acgaggctga aatcatgaac
     1141 gtcgtcggcg acgtgcaagg ccgtaactgc ttgattgtcg acgacatgtg cgacaccggc
     1201 gggtcgatta cgaaggtcgc gaaagcgttg aaaaaagcgg gcgcggaacg cgtccacgca
     1261 tgcttcacgc atccggtgct ttcgggccgc gcggccatgc acctggaagc gtcggacatc
     1321 gagcagattg tagttacgaa cacaattccg ctaaactcta aggcagccga actcaagaac
     1381 attacggttc taagtattgc gcctcttttg gcgaaggcaa ttaagtcgat ccatgaagag
     1441 acttcggttt cttcgctctt cgtatgaagg gcaaaaactg aaaagctttt agccgtcagc
     1501 tctcagcttt cagtaaacaa cttgggatag tcgcgagcgg agccatcgac tggtttcgtg
     1561 ttttcgcttg ctgatagctg aacgctgaaa actgacagct tatttttgga gagcaatcat
     1621 ggcagagaag aaagacattg taatcaaagc gcaggcgcgt gaaggacgtg ggaagaatga
     1681 ttcgcgccgc gcgcgtcgta acggacaagt ccccgtcgtc atctacggcg gccagggcga
     1741 aagcgtagcg gcgttggcgc agttaagcga gttggcggcg atccttcgct cggacaccgg
     1801 tcggaatacg atcttcacgg tggatgtcga gggcgtgggt gcgagcgaag tcatgttcgc
     1861 ggatcgccag attgatccgg tgcgcatgcg gctgattcat gcggatttca aacgactggt
     1921 caagggcgag aagatcgaag cgacggttcc gctgcgactg gttggtgagc cgattggcgt
     1981 gcgcgagcag tcaggcatgc tcgaacagat cgtgcgcaac atcgacattc gttgcgaacc
     2041 ccgcgagatt cccgaacaca tagatatcga cgtgacgaac ctcggcgtgc acgaggtgct
     2101 gcacgtttcc gacattccgg tcgcggccgg gatagaaatt ctggaatctc cagacacagt
     2161 gatcgcgact gtcggcgtgg tgaaggaaga agtcgttgaa gttgcgccgg tggaaggcga
     2221 agtaccggcc gaaccggaag tcatcagcaa gggcaagaag gaagacgaag gcgagggcga
     2281 agaagccaag taaaaaggca aaaggaaaaa ggaaaagagc ggtgctgcta cttttgcctt
     2341 ttaccttgga cttttacctt atgcggctca tcgttggatt gggaaacccg ggcgaagagt
     2401 acaagtggac gcgccacaac ctgggtttca tgttgattga caagttggct gcggaagcag
     2461 atgtgaccgt caagcggcgc gattgtcgat ccctggtggg gtcggcggtg attgggggtg
     2521 aacgtatccg gctggtgaag ccgcaaacgt tcatgaactt gagtggcgaa gcggtcgcat
     2581 gtttgctcgc gaaagaaaat gttgacgaga catcgcagga cttaatcgtc atcagtgacg
     2641 atctggcttt gcctttcggc acaattcgat tgcgtgagcg tggcagcgcc ggcgggcaca
     2701 acggactgaa gtcgattatc agtaccgttg gcacaaatga gttcatccgg ctgcggatgg
     2761 gaatccagcc ggatcatccg gttagtgacg cgaaagcttt cgtgcttgag gattttcgaa
     2821 agccgcagcg ggacgaggtt gaaaagattt tggccagagc cgctgaagcc gtgcattcgg
     2881 ttttgcggga cggcatcagg aaagcgatgt cg
//
LOCUS       DATDBY010000024         2527 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1613415, whole genome shotgun sequence.
ACCESSION   DATDBY010000024 DATDBY010000000
VERSION     DATDBY010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2527
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1613415"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(404..1372)
                     /locus_tag="VIT19_00545"
     CDS             complement(404..1372)
                     /locus_tag="VIT19_00545"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEY5837488.1"
                     /translation="MSILVFIEHKSGALNKTSLEAIAAGQKLAGDTGQKVSAVVLGSA
                     ELAGEIAGYDLEKVISVENDKLTDYTPDAYAAALEQVVRATNPEYVVMSHTYQARDFA
                     PKVAARFQKGLIGDCIRMNVEGDKRVFTRRIFLGKLDADVVSEGEPPTFVTFQSGAFR
                     GDQAVKGSGAPVESMSIEVGEVRMKPEAPFQEAKQAVDLSKADVIVAVGRGIKSKDNL
                     ALAEKLAEALGGDLAASRPICDAEWLPIDRQIGSSGQTVAPKLYIAIGISGAIQHLVG
                     MKNSQTIVAINKDPEAPIFDIADYGIVGDLFEAVPVLTEEIKKLKG"
     gene            complement(1445..2218)
                     /locus_tag="VIT19_00550"
     CDS             complement(1445..2218)
                     /locus_tag="VIT19_00550"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEY5837489.1"
                     /translation="MKILVLMKQVANKDAILRINKDSTWIEEADLSFEVNESDGYALE
                     ESLRIKEKVGGEVVVVSMGPQRAKSVIKDALARGADRAIHVVGDNVGHLSPFAAASVL
                     AEAIREENADLVMTGLQSDDYGYAQTGVILAEVLGLPHATIVIELDATGEQLRVKREL
                     ESGWYQWYTMPTPALLTIQSGISQIRYATLKGIMAAKKKEIKEVPASPDIVGKPSHQR
                     IEKIYLPQKSKQTQFLGNGDAKKGAVELAEKLRTEARVI"
     gene            complement(2330..>2527)
                     /locus_tag="VIT19_00555"
     CDS             complement(2330..>2527)
                     /locus_tag="VIT19_00555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ACP synthase"
                     /protein_id="HEY5837490.1"
                     /translation="EGVFSVLSIYRNILLPTINYQTPDPDCDLDYIPNQAREVRINYA
                     LSNSFGFGGTNAALLFKRYED"
BASE COUNT          519 a          723 c          678 g          607 t
ORIGIN      
        1 atctttagta atgtgagttt ctgatcgaaa agcgtcgtga cgtcactggc cagacgctcc
       61 agaagagacg gcaggtcctg aggctgttca agggtcgtgg ttgtttgtcg ttctgccatt
      121 agtcggtgca gacaaacaaa cggcaggcca aagagatgcg gttgggctgg accgaatttg
      181 cgaagctaca taaagcttag cgatgaagcg tgacggctga ggaacatttt aatgggacag
      241 attgactggt cgctcgtact agaaaactac agtctgaacc ttcgattacc tcatggtcgg
      301 gaagggtgct tgcgcccgct cactctaaat attaacaggc gggggcaaag ccacccttcc
      361 tcaccacgag acacccgtgg agcgcgccag atgcccaagg cccttaccct ttgagcttct
      421 tgatttcttc ggtgagcacc ggcacggctt caaagagatc gccaacgata ccgtaatcgg
      481 cgatgtcgaa gatgggagct tccggatctt tgttgatggc gacaatggtc tgcgagttct
      541 tcatcccgac caggtgttgg atcgcgcctg agattccaat cgctatgtaa agcttcggcg
      601 cgaccgtctg gccggacgat ccaatctgcc gatcgattgg cagccattcc gcgtcgcaaa
      661 tgggccgcga tgccgcgaga tcgccgccca gcgcttcagc taatttttcc gcgagcgcca
      721 gattgtcttt gctcttgatt ccacggccga cggccacaat cacatccgct ttgctgagat
      781 cgaccgcctg tttcgcttcc tggaaaggcg cttcgggctt catgcggact tcaccgactt
      841 caattgacat cgattcgacc ggagctccac ttcccttcac tgcctggtcg ccgcggaacg
      901 cgccggactg aaacgttacg aaggtcggcg gctcgccttc cgaaacgacg tcagcatcca
      961 acttgccgag aaagattcgc cgcgtaaaga cgcgcttgtc gccttcgacg ttcatgcgaa
     1021 tgcagtcgcc gatcaaaccc ttctgaaatc gcgccgcgac cttcggggca aagtcgcgcg
     1081 cctgatacgt gtgcgacatc actacgtatt ccggattcgt cgcccgcaca acctgctcca
     1141 gcgcggccgc gtaagcatcg ggcgtgtaat cggtaagctt gtcgttttcg accgagatta
     1201 ctttctcgag atcgtaaccg gcaatctcgc ccgccagctc agctgagccc agcacgaccg
     1261 ccgagacttt ctggcccgtg tcgccggcga gtttctgtcc cgcagcaata gcctcgagtg
     1321 aagtcttgtt cagcgcgccg cttttgtgtt cgatgaatac gagaatgctc attttggatg
     1381 tggcacagtc ttcagtctgt gactttgttc gatagtcgaa atacagagtg aagtctgtgc
     1441 cacttcaaat cacacgcgct tcagtccgca gcttctcagc caattcaacg gcgcccttct
     1501 tcgcatcgcc attaccgagg aactgtgtct gtttcgactt ctgcggcaga tagatttttt
     1561 caatgcgttg atgcgaaggc ttgccgacaa tatcggggga cgccgggact tccttaatct
     1621 ctttcttctt cgcggccatg atgcccttca gcgtcgcgta gcgaatctga ctaatgccgg
     1681 attgaatcgt gaggagcgca ggcgtcggca ttgtgtacca ctggtaccag ccactttcga
     1741 gttcgcgctt cacgcgcagc tgctcgccgg tggcgtccaa ttcgatgacg atcgttgcgt
     1801 gcggcagtcc gaggacctcc gccagaatca cgccggtttg ggcgtagccg taatcgtcag
     1861 actgcagccc ggtcatgacg agatcggcat tctcttcgcg aatcgcttcc gccaaaacgg
     1921 aggcggccgc gaacggtgaa aggtgcccga cgttgtcgcc cacgacatga atcgcgcgat
     1981 ccgcgccgcg cgccagggcg tctttgatta cgctcttcgc gcgctgcgga cccatcgaca
     2041 cgaccacgac ttcgccgccg accttttcct tgatgcgcag agattcttcg agggcgtagc
     2101 cgtccgattc gttcacttcg aacgacagat cggcctcttc gatccaggtc gagtctttgt
     2161 ttatgcgcag gatcgcgtct ttgttcgcga cctgcttcat aagaacaagt attttcattt
     2221 cccgagttgc gtgttctgat ctttgtactt tgaactttgt actttgaact gctgctcaag
     2281 tcgcggtaga catcaaagta caaagcacaa agtacgaagc acagcttttc tagtcctcgt
     2341 accgcttgaa caacagcgcc gcgtttgtcc cgccgaatcc gaaactgttc gacagggcgt
     2401 agttaattct aacttcgcgt gcctggttcg gtatgtaatc cagatcacag tcgggatcag
     2461 gcgtttggta gttgatagtc ggcagcagaa tgttccggta aatcgagagt acagagaaca
     2521 cgccttc
//
LOCUS       DATDBY010000025         8308 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1391509, whole genome shotgun sequence.
ACCESSION   DATDBY010000025 DATDBY010000000
VERSION     DATDBY010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8308
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1391509"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..651)
                     /locus_tag="VIT19_00560"
     CDS             complement(<1..651)
                     /locus_tag="VIT19_00560"
                     /inference="COORDINATES: protein motif:HMM:NF015655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837491.1"
                     /translation="MLDQLNKLPDSHTPRVLYDRLVERDSSIAKLLERDKGLFLDVLA
                     LAAWSPWLATTLEQNADYLSWLQRERLDTRVRSREDIGESLARFALTHSQLDPHDVFA
                     RFRRRELLRIYLHDIRRAHTVAETTEELSNLADAILEYALRLSRQRLDNRFGSPQRID
                     SEGRVVATEFCVVALGKLGSRELNYASDIDLMFLFSDEGMTAVGGTRGQVTNREYYV"
     gene            complement(844..2268)
                     /gene="glnA"
                     /locus_tag="VIT19_00565"
     CDS             complement(844..2268)
                     /gene="glnA"
                     /locus_tag="VIT19_00565"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEY5837492.1"
                     /translation="MNAKTVLKYASEHKAKFVSVRFTDLPGSWQHLTFPINQLNEDSF
                     EDGFGFDASSIRGWAAIHESDMLLVPDASRHWMDPFADEPTLCLFANAVDPLSRQGYA
                     FDPRMVAVRAESYLKSSGIADVANFGPEAEFFVFDSVQFHNEPHKAGYAIDSDEGHWN
                     TGRDGNDTFGPNLGHRIRAKEGYVPVPPIDTLADLRSAISLTLAECGINVECHHHEVA
                     TAGQCEIDFRYATLLGTADNLQLFKYIVKNTAYEYGKTATFMPKPLYGDNGSGMHCHQ
                     SLWKGDKPLFAGDGYAGLSETALHYIGGLLKHAAAIVAFAAPTTNSYKRLVPGFEAPV
                     NLAYSARNRSAAIRIPMFSTNPKLKRLEFRPPDPSCNPYIAFAAMLMAGIDGIQNRID
                     PGAPLDKDIYDLSPEELKDVPSLPGSLDDALTALENDHDFLLKGDVFTPQMIDRWISY
                     KREREIQVLRMRPHPLEFSMYYDV"
     gene            2693..4642
                     /gene="speA"
                     /locus_tag="VIT19_00570"
     CDS             2693..4642
                     /gene="speA"
                     /locus_tag="VIT19_00570"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF003763.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEY5837493.1"
                     /translation="MTTAIEQTVETYGIENWGAGYFDVNRKGNLVVRPAEGDPRAADV
                     REIIEDLTRRGISAPVLLRFPQLVAGQVRKLQRAFSKSIREFEYQGAHMCVYPMKVNQ
                     QRAVVEEYLREGSRYDFGLEAGSKAELYAAMALEQSPDSLLVLNGFKDEEFIQLAFGS
                     AKSGKRVVIVIEKLSELDHILRIAETHEGNSPIIGMRVKLYSKGSGRWEKSGGEAAKF
                     GLTTTELLEVINRLKEADRIDMLKLLHFHIGSQLTDIKRIKNAMKEAARVYAKVYQMK
                     VPVELLDVGGGMAVDYDGSKTAFDSSANYTAQEFANDVIYTIKQVCEDENVPHPTIIQ
                     ESGRFLSAYHAILVTNVLDEIETVVEDITPIEIEEDDPQVVIELADLRETITIKNYRE
                     YYHDALEHREELFTMFNLGLISLEDRAKGEVLFWDVCERADRYAQQSKYVPEEFGELR
                     RLLCAKYLTNFSVFKSVPDHWALDQLFPIVPIQMLNKTPTEFATLCDITCDSDGVVDK
                     FVDLHDVKQTLELHKLDPNEPYYLAFMLVGAYQEVMGNNHNLFGTPHEAQIHIDEEGY
                     LIKKVIRGTTVGEAAGRARYERGLLHDGFRRQVTQRIKDDEMTEAEGAELVDFYESRF
                     DAYTYVAVNGNGSNGKGNRGRRRHD"
     gene            4707..5768
                     /locus_tag="VIT19_00575"
     CDS             4707..5768
                     /locus_tag="VIT19_00575"
                     /inference="COORDINATES: protein motif:HMM:NF014027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HEY5837494.1"
                     /translation="MVTQRKPKPSKYLTIPTRPVAVDRDRSVAGLLEKMEGAGFGGRQ
                     LAEAHRIWLDMLGDATTITVTASGALIPAGMRRLLAYVIKNRFVDVLVLSGNVIFHDL
                     HETLGRHHFQAHPNMTDAELEVAQINRMWDLLASEEEYHEAEEWVGGFASQLDQSRPY
                     STREFLHLLGRELAEIAAEDGVLTAAYKSRVPVFCPGIGDSGIAVGIAGSRFEKKNNF
                     TFDLVQDVLDLTQIALRARVSGLISLGGGISKSFGKQSEMAAHIFKQQVLGHKYAIQI
                     AADSPHPGGRSTAVVFNEQEIYGKLARNALTAYVNCDATIALPIIITALSQTAAKYMK
                     GRRRPNFTFAGKDLMIDVP"
     gene            5953..6285
                     /locus_tag="VIT19_00580"
     CDS             5953..6285
                     /locus_tag="VIT19_00580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837495.1"
                     /translation="MPLSERARVEVYLPDLPRATYQELLAALTREFTYTFGGCPINAD
                     LDGSYLSADGVQIHDRINLIYTDTPYTFEENFEIISAYADKLKAAVFAALEEDAILVA
                     VMKTYHAE"
     gene            6425..7339
                     /gene="speB"
                     /locus_tag="VIT19_00585"
     CDS             6425..7339
                     /gene="speB"
                     /locus_tag="VIT19_00585"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR01230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HEY5837496.1"
                     /translation="MSESQSLPMNFGGIAEEEFSSFENSRVLVWPIAYEGTVSYGGGT
                     GKGAAAIIDASRNMELYDEETDAEVYKLGIHTLDESTSIDPPERMMNSLYLRAKELIS
                     SEKFVTMIGGEHSVSAPVIRAHAEKYSNLSILQIDAHADLRDTYDGTPYSHASIMARV
                     VKDLQIPAVQVGIRSISVEEARELDQLPTRIFWAKDIVGRDDWWDEAVDGLTENVYLT
                     VDIDGLDPSLVSATGTPEPGGLGWYETIGLLRTLARKRNVIGMDLTEYSYVEGQNASA
                     FLCAKLIYKTLGFVFEKETEKVRKLSAP"
     gene            complement(7528..>8308)
                     /locus_tag="VIT19_00590"
     CDS             complement(7528..>8308)
                     /locus_tag="VIT19_00590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837497.1"
                     /translation="RRHLAALKDGNDAVDKHRAVIKLDPNYRDAEMTIGLYDYTVGAL
                     PLPTKIAVGFLGHRGSKKRGIATIERVAREGNWVKEDAKTLLIMLYKRENRFTDAVAL
                     GRELGAKYPRNYLYKLETAEALVSQAALGRKANPSAATSAAETEAFATFETLLRDKNL
                     RETAGKALDLIHFKYGEALMTAGQNEKAAKEFLAAASAPGAQQGLATMALLYAARALD
                     LSGKRNDALTQYRAVLTRPNVYDAHEQATEGLKESYKKKLT"
BASE COUNT         1904 a         2275 c         2364 g         1765 t
ORIGIN      
        1 gacgtaatat tctcgattcg tgacctggcc acgcgtcccg ccaacggctg tcatcccttc
       61 atccgaaaaa aggaacatca gatcgatgtc cgaagcgtaa ttgagttccc gcgaaccgag
      121 ctttccgagc gcgacgacgc agaactcagt ggccacaacg cggccttccg aatcgattcg
      181 ttgcggtgat ccaaatcggt tgtccaaacg ttgtcgtgat aaacggagcg catattcaag
      241 aatggcgtct gccagattcg acaactcctc agtggtctcg gcgacggtgt gcgcgcggcg
      301 gatgtcgtgc aggtaaatcc gcagaagctc acggcggcga aaacgcgcga acacatcgtg
      361 cggatcgagc tgtgagtgcg ttagcgcaaa ccgcgccagc gactcgccga tgtcttcgcg
      421 actgcggacg cgcgtgtcca ggcgttcgcg ttgtaaccag ctcaggtagt ccgcattttg
      481 ttccagcgtt gtcgccaacc acggactcca cgccgccagc gccagcacgt ccaggaacaa
      541 acccttgtcg cgctcaagca gtttcgcgat cgagctgtcg cgttcaacga gccgatcgta
      601 aagtacccgc ggcgtgtgcg agtcaggtaa tttgttgagc tggtcgagca tgtcgcttgc
      661 cgcctatctt acgcggcgag tgatgacacg agccagtgag aagctttaac ggagtttagc
      721 gtgaggttcc tctgtgtctc tgtgcacgca ctccgtgcct ctgtggtgga cattcgctga
      781 acggctagcc accacagaga caccgaggtt ccacagagac acggagaggt gtgtgaccga
      841 cgactagacg tcgtagtaca tcgaaaactc aagcggatgc ggccgcatgc gcagcacctg
      901 aatctcacgc tcgcgtttat acgaaatcca gcgatcgatc atttgcggcg tgaacacgtc
      961 gcccttcaag agaaagtcgt gatcgttctc taatgcggtc agcgcatcat cgagcgagcc
     1021 gggaagactc ggaacatcct tcagttcttc gggcgaaagg tcgtagatgt ccttgtcgag
     1081 cggcgcgccg ggatcgatgc ggttctgaat gccgtcgatt cccgccatca gcatcgccgc
     1141 aaacgcgata tagggattgc acgacgggtc gggcggacga aactccaggc gtttcagctt
     1201 tggattcgtc gagaacatcg gaatgcgaat cgcggccgaa cgattccgcg ctgagtaagc
     1261 cagattcact ggcgcttcga aacccggaac cagtcgcttg tagctgttcg tggtcggcgc
     1321 ggcaaaggcg acgatagccg ccgcgtgctt cagcaacccg ccgatgtaat gcaaggccgt
     1381 ttcagacagt cctgcgtagc cgtcgccggc gaacagaggt ttgtcgcctt tccacagcga
     1441 ctggtgacag tgcatccccg aaccgttgtc gccatacagg ggcttcggca taaacgtcgc
     1501 agtcttgccg tactcgtacg ccgtgttctt gacgatgtac ttgaataatt gcaggttgtc
     1561 ggccgtgccc agcagcgtcg cgtatcggaa atcaatttcg cactggccgg cggtggcgac
     1621 ttcgtgatgg tgacattcga cattgatgcc gcactcagcc agcgtcagcg aaatcgccga
     1681 acgaagatcg gcgagggtgt cgatgggcgg caccggcacg tatccctctt tcgcgcgaat
     1741 acgatgaccg aggtttggcc caaacgtgtc gttgccgtcg cgcccggtgt tccagtgacc
     1801 ttcgtcggaa tcgatggcgt agccggcttt gtgcggctcg ttatgaaact gcacactgtc
     1861 gaaaacaaag aactcggctt cggggccaaa gtttgcgacg tcggcgattc ccgagctctt
     1921 gagatagctc tcagcacgca ccgcaaccat gcgcgggtcg aacgcgtagc cctgacgcga
     1981 aagcgggtca actgcattcg caaacaaaca cagcgttggt tcgtccgcaa agggatccat
     2041 ccaatggcga ctagcgtccg gaaccaggag catgtctgac tcgtgaatgg cggcccaacc
     2101 ccgaatggac gaggcgtcaa aaccaaagcc atcctcgaac gagtcttcgt tcagctggtt
     2161 gatcggaaaa gtcaggtgct gccaggagcc gggcaagtcg gtaaatcgca ccgagacaaa
     2221 tttcgccttg tgctcagagg cgtacttcaa cacagtttta gcgttcatct gatctcctgt
     2281 ctggaaaagt gagtgatgtg cttgaccttc gccccttacg ggtgtttggt gcgaagactt
     2341 tcgtggaccg gacggtgtgt agcgcgcgaa gaagcgtcat gaaccgcgca tcaaaaaacg
     2401 tgcattataa ccgcggaatt cgttctgtca acagtccgtt tgggttttat ttgcccactg
     2461 caaaacattg tgcgcgctga catgtcttcg acaaaacacg cgagttccgg catttagcga
     2521 agaaaacaac acaaaagtac cggaaaaaag ttatagaccg acccctcatt ttctgttaaa
     2581 ttttccgctt aaggttccaa ccccaatata tccgctcaga attgcattcc cgacccgtcg
     2641 ggattgtcgc gcggacaaac gcgttaagag aactccaggg agagaccgct agttgaccac
     2701 agctatcgaa cagacagtcg aaacctacgg aatagagaat tggggcgcag gctacttcga
     2761 cgtaaatcgc aaaggaaatt tggttgtccg gcccgccgaa ggcgatccac gcgcggcgga
     2821 tgtgcgcgag atcatcgagg atctgacgcg cagaggaatc tccgcgcccg tgctgctgcg
     2881 gtttccccaa ctggtcgccg ggcaagtacg caagttgcag cgcgccttca gcaaatcaat
     2941 tcgcgaattc gagtaccagg gcgcgcacat gtgcgtgtat ccaatgaagg tgaaccaaca
     3001 acgggcagtc gtcgaagagt acctgcgcga aggatcgcgt tacgactttg gcctcgaggc
     3061 cggttcgaaa gctgagttgt atgcggccat ggcgctcgag caatcgcccg acagcctgct
     3121 cgtgctcaat ggcttcaaag atgaagagtt catccagttg gctttcggca gcgcgaagtc
     3181 gggcaagcgg gtcgtcatag tgatcgagaa actgagtgag ctcgatcata ttctcaggat
     3241 cgccgaaacc catgaaggca actcgccaat catcggcatg cgcgtgaagc tgtattcgaa
     3301 gggctcgggc cgctgggaaa aatcaggcgg cgaagcggcg aagttcggac tgacgacgac
     3361 tgagctgctc gaagttatca accggctgaa ggaagccgac cgcatcgaca tgctgaagct
     3421 gctgcacttt cacatcggct cgcagcttac cgacatcaag cggatcaaga atgcgatgaa
     3481 ggaagccgcg cgcgtgtatg caaaggtcta tcaaatgaaa gtgccggttg agctgctgga
     3541 tgtgggcggc ggcatggcgg tggactacga cggctcgaaa accgcgttcg attcatcggc
     3601 gaattacacg gcccaggaat ttgcgaacga cgtcatttac acgatcaaac aggtctgcga
     3661 agacgaaaat gttccgcatc ccacgattat tcaggagtca ggccgttttc tttcggcata
     3721 tcacgcgatt ctcgtgacga acgtgctcga cgaaatcgaa acggtcgtcg aagacatcac
     3781 gccgattgaa atcgaagagg acgatccgca ggtcgtgatt gaacttgccg atctgcgcga
     3841 aacgatcacg attaagaact atcgtgagta ctatcacgac gccctcgagc atcgggaaga
     3901 actcttcacg atgttcaacc tgggtttgat ttcgctggaa gaccgggcga agggcgaagt
     3961 gcttttctgg gacgtttgcg agcgcgcgga tcgatacgcg cagcaatcga aatacgttcc
     4021 tgaagaattc ggcgagctgc ggcggctgct gtgcgcgaaa tacctcacga atttttctgt
     4081 tttcaaatct gttcccgatc actgggcgct ggatcagctt tttccgatcg tgcccataca
     4141 gatgttgaac aagactccga ctgaattcgc cacgctgtgc gatatcacct gtgactcaga
     4201 cggtgtggtc gataagttcg tggaccttca cgacgtcaag cagaccttgg aattgcacaa
     4261 gctcgatccg aacgagccgt actatctcgc attcatgctg gtcggcgctt atcaggaagt
     4321 gatgggcaac aatcacaacc tgttcggcac gccgcacgaa gcgcagattc atatcgacga
     4381 agaaggctat ctcatcaaga aagtgattcg cggaacgacg gtcggcgaag ccgcggggcg
     4441 cgcgcgttac gagcgcggat tgctgcacga tggctttcgc cggcaggtaa cgcaacgaat
     4501 taaagacgac gaaatgaccg aagcggaagg cgcggagctt gtagattttt acgagtcgcg
     4561 tttcgacgca tacacatacg tcgcagttaa cggtaacggt agtaacggta agggaaaccg
     4621 cggccgccgt cgtcatgatt agtagtaaca cagacttcag tctgtgataa cgccgcggcg
     4681 ttagctgaag cacaaaggaa gaatttatgg tcacacaacg caaacctaaa ccaagtaagt
     4741 atctgacaat tccaactcgg ccggtggcgg ttgatcgcga tcggtctgtc gccggactgc
     4801 tggagaagat ggaaggcgcc ggctttggcg gacgacaact cgcggaagcg caccgtatct
     4861 ggctcgacat gctgggcgac gcgaccacga ttaccgtcac ggcttcaggg gcattgattc
     4921 cggcaggcat gcggcgcctg ctggcttacg tcatcaagaa ccgtttcgtg gatgtgctgg
     4981 tgctgtccgg caacgtgatt ttccacgact tgcacgaaac gctcgggcgg catcattttc
     5041 aagcgcaccc caacatgact gacgctgagc tggaagtggc ccagatcaat cgcatgtggg
     5101 atttgctggc gagtgaagag gagtatcacg aggcggaaga gtgggtgggc gggtttgcca
     5161 gccagcttga ccagtcgcgg ccttattcga cccgcgagtt cctgcatttg ctcggtcgtg
     5221 aactggctga gatcgccgcc gaagatggcg tgctgaccgc ggcttacaaa tcgcgcgtgc
     5281 cagtcttctg tccaggtatc ggtgacagcg ggatcgccgt gggcatcgcc ggttcgcgct
     5341 ttgaaaagaa aaacaacttc acgttcgatc tggtccagga cgtgctcgac ctgacgcaga
     5401 tcgccctgcg tgcgcgcgtt tcgggcctga tcagcctggg cggcggcatt tcgaagagct
     5461 tcgggaagca atcggaaatg gcggcgcaca tcttcaaaca gcaggtgctc gggcacaagt
     5521 acgcgattca gatcgccgct gactcgccgc atcccggggg ccgttccacc gcggtggtct
     5581 ttaacgagca ggagatatac ggaaaacttg cccgcaacgc actgacggct tacgtcaatt
     5641 gcgacgccac gatcgcgctg ccaatcatca tcacggcgct ttcacagacg gccgcaaagt
     5701 acatgaaggg ccgccgccgg ccgaacttca cgttcgcggg taaagacctg atgatcgacg
     5761 tcccgtagcc gtccgcgtag aggtgggtag aattcgacag tccgttttgc gatcgagcta
     5821 aactatcaac catggcgaga cgattgaaag acttaaaaga agcgaaggtt gaacgcgcac
     5881 cgcggctcaa gctatcagcc aaagaatcgt tgaagcgaac acaggagttc gacaagcgaa
     5941 aggagcagtt cattgcctct gtccgaaagg gcaagagttg aagtctattt gcccgacctt
     6001 ccacgtgcta cttatcaaga gctgctagcc gccctcacgc gagaattcac ctacactttt
     6061 ggcggttgcc ccatcaatgc agacttggat ggcagttatc tttcagcgga cggcgttcaa
     6121 atccacgatc gcattaattt gatctacaca gacacgccgt acacgttcga agaaaacttc
     6181 gaaatcattt ctgcctatgc cgacaaattg aaagcggctg tctttgctgc gctggaggaa
     6241 gatgcaattc tggtggcggt gatgaaaacg tatcacgcgg agtgagcgtt tacggtttca
     6301 ggcgaagcgt ttttgagtcc aactgatttc ggctagattc aagcaactaa cgcggaaacg
     6361 agcaaaagcc tttcctcgtt gagcggttct ggcttctcgt tcacgccttc gctaaactca
     6421 attcatgtct gaatcgcagt ccctgccgat gaacttcggc ggcatcgccg aagaagaatt
     6481 ctccagcttc gaaaactcac gcgttctggt ttggcctatt gcgtatgaag gcacggtttc
     6541 atacggcggc ggcacgggca aaggcgcggc ggcaatcatc gacgcgtcgc gcaacatgga
     6601 gttgtacgac gaagagaccg acgccgaagt ctataagctc ggcattcaca cgctggacga
     6661 gtcgacatca atcgatcctc ctgagcggat gatgaattcg ctttaccttc gcgcaaagga
     6721 acttattagc agcgaaaaat tcgtcacgat gatcggcggc gagcattcgg tgagcgcacc
     6781 cgtgattcgc gcccatgccg agaagtattc gaacctctcg atcctgcaaa tcgacgcgca
     6841 cgccgactta agagacacct acgacggcac accttattca cacgcttcaa tcatggcgcg
     6901 cgtggtgaag gatcttcaaa tcccggctgt gcaggttggc attcgatcca tttcagtcga
     6961 ggaagcgcgc gagcttgatc aactgccgac gcgaatcttc tgggccaaag acatcgtcgg
     7021 tcgcgacgat tggtgggatg aagcggttga tgggctgacc gagaatgttt acctgactgt
     7081 tgatatcgac ggtctcgatc cttcgctggt ctcagcgacg ggaacgcctg aacctggcgg
     7141 gctgggctgg tacgagacga ttgggctgct tcgcaccctc gcgcgcaagc gcaacgtcat
     7201 cggcatggat ctgactgagt attcgtacgt cgaaggccag aacgcctctg cgtttttatg
     7261 cgcgaagttg atctacaaga cgcttggatt tgtgtttgag aaagaaactg aaaaggttag
     7321 aaagctttcc gctccgtagg agccgaatgt ttatagaaca cgaacacggt caaaagacta
     7381 agctccttta ggagcgcaac gtttatcgcg ctcctaaagg agcttaaata atttctggca
     7441 gggccgtaac tataaacatt gagcgcctaa cggcgctgaa tagccagcat tgcgggcaaa
     7501 agcccacctc taaaccgtcc ggtcgattta agttagcttc ttcttgtacg actccttcaa
     7561 tccttccgtc gcctgttcgt gcgcgtcgta aacattcgga cgcgtaagga ctgcgcgata
     7621 ttgcgtcaat gcatcgttcc gcttgccgct tagatccaat gcgcgggccg cgtaaagtaa
     7681 cgccatcgtc gccaagccct gctgggctcc cggcgcgctc gcggcggcga gaaattcctt
     7741 tgccgctttc tcgttttgtc ccgcggtcat cagcgcctcg ccgtatttga agtgaatcag
     7801 atccagagcc ttcccggccg tctcgcgcag attcttgtcg cgcagaagag tttcaaaggt
     7861 agcgaaagct tccgtctcag ccgcagacgt ggccgccgac ggatttgctt tgcgtccgag
     7921 cgctgcctgc gagaccaacg cctcagcggt ttccagctta tacaagtaat ttcgcgggta
     7981 cttcgcccct agttcacgcc cgagggccac ggcgtcggtg aatcggttct cacgcttgta
     8041 gagcatgatg agcagcgtct tcgcgtcttc cttgacccaa ttgccttcgc gcgcaacgcg
     8101 ctcaatggtc gcgataccgc gcttctttga tccgcggtgc cccaaaaagc cgacggcgat
     8161 cttcgtgggc aaaggcagcg cgcccaccgt gtaatcgtaa aggccaatcg tcatttcagc
     8221 gtcgcggtaa ttcggatcga gtttgatcac cgctcgatgc ttatcaaccg cgtcgttgcc
     8281 gtctttcagc gccgcgaggt gccggcgc
//
LOCUS       DATDBY010000026         2557 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1391338, whole genome shotgun sequence.
ACCESSION   DATDBY010000026 DATDBY010000000
VERSION     DATDBY010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2557
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1391338"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1284)
                     /locus_tag="VIT19_00595"
     CDS             complement(<1..1284)
                     /locus_tag="VIT19_00595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837498.1"
                     /translation="MPVNDQEPAETKRSAPPSASRRGRRRFINRRNTIIVAIVAAVGI
                     VALILIALLSYRFGYVDAYIAAQVKNTLATYGIRAEIREFRTAVSVGPQTVEMLGVEL
                     YDAQTGEKLGKIDRMVATVRIEDLYALNLQRNINLKDLQIEGLELWVNFDAQGQSNFR
                     NLRMPPPEPNQRILFAYSTAHIDVKNALIHYGDALHSLSGEARNLQATIQPDDPNAPA
                     ESWMNTVTLSATNSTLAYDGRPINNIDIEARGRVNQIRAEIHELKLRSPVAEATLNGV
                     MGDWRKLQYNFNVTSTVDLTQLSDVLATGTALRGVSNFTATITGEGDKYQLNGGVKSD
                     ALAAGNIRLQGLNVTAKGSGQGESYDFNGRAVAQLLTAGDFQLNAVQLTGGVMGTGSD
                     FRWVGELRAAAEKSYGTTITGLILRDAVAEYRGGVL"
     gene            complement(1475..>2557)
                     /gene="ribB"
                     /locus_tag="VIT19_00600"
     CDS             complement(1475..>2557)
                     /gene="ribB"
                     /locus_tag="VIT19_00600"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: protein motif:HMM:NF013118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEY5837499.1"
                     /translation="AAEKVTPEVINFMARHARGLICLPLTEDRCDELHLAPQVADNTS
                     FLGTAFTVSIEARRGVTTGISAADRATTILTAVDSRTKPQDLARPGHVFPLRAKKGGV
                     LVRPGQTEAAVDIARIAGLYPAGVICEIMNEDGTMARLPQLKDFAVKHGLKIITVADL
                     VRYRIQKEVLVRRAVETDLPTVYGKFRAIAFENTINGDVHLAMVMGDVRTDDPVMVRV
                     HTENVTCDMFGSTIDDTGYQLRRALEKIAEAGQGVVLYLRQSEHGLDLIHQLRTYALM
                     QERGASKREASAETGYGLNRDYGIGAQILHELGLRRILLLTNHPPKISAIEGFELEVV
                     GNVPLGSPATKESALSSITDLVAQTD"
BASE COUNT          521 a          751 c          738 g          547 t
ORIGIN      
        1 caagacgccg ccgcgatatt cagcgacggc atcgcgcaga atcaggccgg tgatcgttgt
       61 gccgtaactc ttttcagccg ccgcgcgcag ttcaccgacc cagcgaaagt ccgagcccgt
      121 gcccatcacc ccgccggtta actgcaccgc gttcaactga aagtcgccgg cggtcagaag
      181 ctgggcgact gcgcggccgt taaagtcgta gctttcaccc tggccagagc ctttcgccgt
      241 tacgttgagc ccttgcagac gaatgttgcc ggcggcgagc gcgtcggatt tcacaccgcc
      301 attgagttga tacttgtcgc cttcaccagt gatcgtcgcg gtgaagttcg aaacgccgcg
      361 caacgctgtg ccggtagcca ggacatccga aagctgagtg agatcaaccg tcgaagtaac
      421 gttgaagttg tattgcagct ttcgccagtc acccatcacg ccgttcaacg tggcttcggc
      481 aaccggtgat cggagcttca actcgtgaat ctcagcccta atctgattga cgcggccacg
      541 cgcctcgatg tcgatgttgt tgatggggcg gccatcgtac gcgagcgtcg agttggtcgc
      601 gctcaacgtc accgtgttca tccagctttc ggccggcgca ttcggatcgt caggctgaat
      661 cgtcgcctgc aggttgcgcg cttcacccga caaactgtgg agcgcgtcgc catagtgaat
      721 cagcgcattc ttcacatcga tatgcgcggt tgagtacgca aacagaattc gctggttcgg
      781 ttcgggcggc ggcatccgta agttgcggaa gttggattgc ccttgcgcgt cgaagttcac
      841 ccacagctcg agcccttcga tctgcagatc cttcaggttg atgttgcgct ggagattgag
      901 cgcgtacaga tcctcgatgc gaacggtcgc gaccatccga tcgatcttgc cgagcttctc
      961 tccggtttgg gcgtcgtaaa gttcgacgcc gagcatctcg acagtttgcg gtccgacaga
     1021 tacagcggtg cggaactcgc ggatctctgc gcggatgccg tacgtcgcca gcgtgttctt
     1081 aacttgcgcg gcaatgtacg catcgacgta accgaaccgg taactcaaca gggcaatcag
     1141 aatcagggcc acaatgccga ccgcggcgac gattgcgaca atgatcgtgt tgcggcgatt
     1201 gatgaaccgg cgacggcccc gtcgtgaggc cgacggcggc gcgctccgtt tagtttcggc
     1261 aggctcttga tcgttcacag gcattaaccg gcagtcgcga ccacggctga acagtaactg
     1321 agattttaca ggagagcccg aaaagtagaa gtcagatgtc agaaatcaga tgtcagatgg
     1381 ccactaacga taaagtctga actctgatct ccgacatctg acgtctgtct tttcaaactg
     1441 aaatcaaggg gaatttaaga acgtagcata gactttagtc tgtctgcgcc accaaatccg
     1501 taattgagct cagcgccgac tctttagtcg cgggcgagcc gagcggcacg ttaccgacca
     1561 cttccaattc aaaaccttcg atcgcggaaa tcttcggggg gtgatttgtc aggagaagaa
     1621 tcctccgcag accgagttca tgcagaatct gcgcgccaat tccgtagtcg cgattgagcc
     1681 cgtagccggt ttccgcgctc gcttcgcgtt tgctggcgcc gcgctcctgc atcagcgcgt
     1741 acgttcgtaa ctggtgaatg agatcgagac catgctcgct ttgccgcaag taaagcacga
     1801 cgccctggcc ggcttcggcg attttttcca acgcgcgccg aagctggtag cccgtgtcgt
     1861 caatcgtcga tccgaacatg tcgcaggtga cgttctcagt atggacgcgc accatcaccg
     1921 gatcgtcggt gcgcacgtcg cccatcacca tcgccagatg gacgtcgccg ttgattgtgt
     1981 tttcgaaagc gatggcgcga aactttccgt aaaccgtcgg cagatcagtt tcgacagcgc
     2041 gtcgcacgag cacttctttt tgaattcgat accgaaccag atcggcgacg gtgatgatct
     2101 tcaggccgtg tttgaccgcg aagtctttga gctgcggcag acgagccatc gtgccgtctt
     2161 cgttcatgat ttcgcagatg acgccggcgg gataaagacc ggcaatgcgt gcgatgtcca
     2221 cggccgcttc cgtctgacca gggcgaacaa gcacgccacc cttcttcgcg cgcagcggaa
     2281 acacgtgacc cggtcgcgcc aggtcctgcg gcttcgtgcg cgaatcgacg gccgtcagaa
     2341 tcgtcgtcgc gcgatcggcg gccgagattc ccgtggtcac gccccggcga gcttcgattg
     2401 aaaccgtaaa cgcggtcccg agaaatgaag tgttgtcggc aacctgcggc gccagatgta
     2461 attcgtcgca gcgatcttca gtcagcggca gacaaatcag gccgcgcgcg tggcgcgcca
     2521 taaagttgat gacttcggga gtgactttct cagccgc
//
LOCUS       DATDBY010000027         5662 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_793073, whole genome shotgun sequence.
ACCESSION   DATDBY010000027 DATDBY010000000
VERSION     DATDBY010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5662
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_793073"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..993)
                     /locus_tag="VIT19_00605"
     CDS             complement(<1..993)
                     /locus_tag="VIT19_00605"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEY5837500.1"
                     /translation="MDLIIRGGTIVTMDGSRRVIDNGGVAVKGGRIVAVGRAAEIDRT
                     YAAREVINATDKVVIPGLINGHTHVPMTLFRGIADDLDLQDWLTKYIFPAEAKNVTED
                     FVRAGTRLGLAEMIRGGTTTYCDMYYFEDAIADETFKAGVRGVLGETVIDFPVADNKT
                     YEEGLAYVERFVKKWKGNALITPAIAPHAPYTVSEDHLKAARALSDRLGCPIVIHISE
                     TKREVDDSIKAKGAPPIVYLDRIGFLSNRVIAAHVVWPMANELNLLKKHGVGMVHNPQ
                     SNMKLASGVAPVPQMLKENLAVGLGTDGAASNHDLSLWEEIDTAAKLHKLFSNDP"
     gene            complement(1333..1749)
                     /locus_tag="VIT19_00610"
     CDS             complement(1333..1749)
                     /locus_tag="VIT19_00610"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF004064.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009972 - cytidine deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HEY5837501.1"
                     /translation="MSETENLIKIATDARLCSLAPFSNFLVGAALRTAEGKIYTGCNI
                     ESASYGLTVCAERVAIWKALSDCERDFTDLVVVVDTEQLTPPCGTCRQIIWEYCKEAK
                     ITLANLRGQRQEVDIAQLLPRAFDARFLNESSSQPK"
     gene            complement(1746..2378)
                     /gene="udk"
                     /locus_tag="VIT19_00615"
     CDS             complement(1746..2378)
                     /gene="udk"
                     /locus_tag="VIT19_00615"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002638452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004849 - uridine kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HEY5837502.1"
                     /translation="MIIGICGGTGSGKTTVANRILESVRADEVVFIQQDLYYRDLKDM
                     PLDYRNAANFDHPDALDNDLLVNHLKKLNAGEPVELPIYDFKTHTRLPATTRVEPKPI
                     VIVEGILIFAEPRLLEQMDIKVFVDTPDDIRFIRRLGRDIAERGRTLDSVTEQYMATV
                     RPMHMQFVEPSRRFADVIIPEGGHNLVSVDLISGKIRERLARDVKVGGQI"
     gene            complement(2535..3374)
                     /locus_tag="VIT19_00620"
     CDS             complement(2535..3374)
                     /locus_tag="VIT19_00620"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF006054.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEY5837503.1"
                     /translation="MSAEPVSSSLYERAEKAVRMIRGRTQTESPIAIVLGSGLGGFAD
                     ELSAATAIPYAEIPGFARATVEGHAGRLVVGKIGDSAVAAMQGRFHFYEGYSLEDVTF
                     PIRVLKLLGVRTLILTNASGALNVEFLPGSLMVITDHINLLGMNPLMGPNDERFGPRF
                     PDLSNTYAHELQEIVLTEARAMGMKMGRGVYASLSGPSYETPAEIHMVRALGADAVGM
                     STVPEAIVARHMGMQVVGISCITNLAAGVSNEPVDHSQVMATGEQVREEFTELLRRVV
                     PKL"
     gene            complement(3475..4611)
                     /locus_tag="VIT19_00625"
     CDS             complement(3475..4611)
                     /locus_tag="VIT19_00625"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5837504.1"
                     /translation="MRQLFTISLLFSTLRLATPLVLASIGGLYSERAGVINIALEGLM
                     LAGAFTAASVTFYAASPWVGMGAAMVAGIAVAMIIALACIKFKADQVVTGTGINIMFL
                     GLPAVLSGAMFLSSGSTPQIPKEQLLPNLSRLLPGFVPQWRIFTEVNIVTVLAVVLVL
                     VTSYVLYRTPFGLRLRAVGENPEAADAAGVSVNKIRYLGVILSGALAGIGGAYLSIGQ
                     SSLFTRNMTAGRGFIALAALIFGKWRPVQTMLACLLFGFADALTIQLQGVPVTMDVLV
                     KALLVLVALILAWIIVRQVSALTRNIALQVLATLVLALGLWNIGWRVSIAFLRGFFAS
                     QAPIEIPVQFIQMIPYVVTIVVLAGFIGQSRAPKAIGIPYEKER"
     gene            complement(4668..5042)
                     /locus_tag="VIT19_00630"
     CDS             complement(4668..5042)
                     /locus_tag="VIT19_00630"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEY5837505.1"
                     /translation="MERTNFEKLQVYQLSEKIADSIWNIVVTWNPLARDTVGKQIVRS
                     ADSIGANIAEGSGRGSLVDNRRFVRMARGSLYETLHWLRRSYTRKLLSQSEVKKLRVL
                     VQELSPKLNAFLRSVDERAKSR"
     gene            complement(5102..>5662)
                     /locus_tag="VIT19_00635"
     CDS             complement(5102..>5662)
                     /locus_tag="VIT19_00635"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837506.1"
                     /translation="APVSGSAHIARLGKFIPGLPERIPVNLAFILAILACVFVYILLW
                     KTKWGYEIRATGANPSAAEYGGISVRKQIVLAMAISGGLAGMVGINEVLGYRYTYYDG
                     FSANYGFVGIAVALLGRNHPVGVFLAAILFAILLRGGIFVDAYTLHVSKDIVDMLQGI
                     VIVFVAAEAMFRGPIKKLGLLKRIRT"
BASE COUNT         1316 a         1685 c         1498 g         1163 t
ORIGIN      
        1 cggatcgttg ctgaacagtt tgtgcagctt cgcagccgtg tcgatctctt cccaaaggct
       61 caggtcgtgg ttcgatgccg cgccgtcagt gcccaagccg accgccagat tctctttcag
      121 catttgcgga acgggagcga cacccgaagc gagcttcatg ttcgactgcg gattgtgaac
      181 catgccgacg ccgtgtttct tcagcaggtt cagctcgttc gccatcggcc aaacgacgtg
      241 cgccgcgata acgcgattgc tcagaaagcc aatccggtcg agataaacaa ttggcggcgc
      301 gcccttcgcc ttgatgctgt catcaacctc acgcttcgtc tcagaaatgt gaatgacgat
      361 cggacagccc agacgatcag aaagtgcgcg cgcagctttc agatgatctt cggaaacggt
      421 gtacggcgcg tgcggcgcga tcgccggagt aatcagcgcg ttccctttcc actttttcac
      481 gaaccgttcg acgtacgcga ggccttcttc gtacgttttg ttatcagcga cgggaaaatc
      541 aatcaccgtt tcgcccaaaa cgccgcgcac gccggccttg aacgtctcgt cggcgatcgc
      601 gtcttcgaag tagtacatgt cgcagtaagt ggtcgtgccc ccgcgaatca tttcggccag
      661 gccgagacgt gtgccggcgc gcacaaagtc ttccgtgacg ttcttcgctt ccgctggaaa
      721 gatgtacttc gtgagccaat cctgtagatc aagatcgtcg gcgatgccgc ggaacagcgt
      781 catgggcacg tgcgtgtgcc cgttgataag gccgggtatg acgaccttgt cagtagcgtt
      841 gatgacttca cgcgccgcgt aggtccgatc gatttcagcc gcgcggccga cggccacaat
      901 gcgcccgcct tttacggcca cgccgccgtt gtcgatcacg cggcgcgagc cgtccatcgt
      961 gacgatggtg ccgcctctga tgattaagtc cacctgagtt ttcctgcgct gagcaaatga
     1021 ctcaattagc gttcccgagg ccaacgtaat aactaacgca gaaaccagca tacgttccgc
     1081 gccggatcga gttcgttggg atcgacgatt caaccagcct gcgaagcagg cgttatgttg
     1141 atagccccgg gcgtaagccc ggggaaacaa tgcgtaaatg aattgaagag ccccgaaggg
     1201 gcgaaaggag aattgccgaa agaacgcaat catgtgaacc tctgccgccc gctccgcggg
     1261 ctataatttt tgtgatgctc aacccccggg ctcacgcccg gggctactac ctgccgcccg
     1321 ctttgcgggc tgctacttcg gctgactgga actctcgttt aaaaaccttg catcaaacgc
     1381 ccgcggcagc aactgggcga tgtccacttc ctgtctctgg ccgcgcagat tcgcgagcgt
     1441 gatcttcgcc tccttgcaat actcccagat gatttgccgg caagtgccgc acggcggcgt
     1501 cagttgttcg gtatccacca ccacaaccaa atcggtgaag tcgcgctcgc aatcggacaa
     1561 agctttccaa atcgccaccc gttcagcgca cacggtcagg ccgtagcttg cgctctcaat
     1621 attgcagccg gtgtagatct ttccttcggc agtgcgcagc gccgcgccca caaggaagtt
     1681 cgaaaagggt gcgagcgaac acaggcgcgc gtccgtcgca atcttgatca agttttcagt
     1741 ttcgctcaaa tctggcctcc aactttgacg tctcttgcca gcctctcgcg aatctttccg
     1801 ctaatcaaat cgacgctcac aagattatga ccaccctcgg ggataattac gtcggcaaaa
     1861 cgccgggacg gttcgacgaa ctgcatgtgc atcgggcgca ccgtcgccat gtactgctcg
     1921 gtcaccgaat ccagcgttcg tccacgctcg gcgatgtcac ggcccaaacg gcgaatgaag
     1981 cgaatgtcgt ccggcgtatc gacaaacact ttaatgtcca tctgctcgag cagccggggc
     2041 tcggcaaaga tcaggatgcc ttcgacaatg acaatcggct tcggctcaac gcgcgtcgtg
     2101 gccggcaagc gcgtgtgcgt cttgaaatca taaatcggga gctcgaccgg ctcgccggcg
     2161 ttcagcttct tcaggtgatt taccagcagg tcgttgtcga gcgcgtccgg atgatcgaag
     2221 ttcgccgcat tgcgataatc gagcggcatg tctttcaggt cgcggtagta gagatcctgc
     2281 tgaatgaaga cgacctcatc cgccctcacc gattccagaa tgcgattggc gaccgtcgtc
     2341 ttacccgatc cagttccgcc acaaatacca atgatcataa cctactcgtc agttgctctt
     2401 tgttttgtac tttgtgtttt ggactttgtg ctttgacgtg tatcccagcg atgctattcc
     2461 actaaaggca actttgccga cacatcaaag tacaaagtac caagctcaaa gcaccgtcac
     2521 agcacaaagc accgtcacag cttaggaact acccgtctta acaactcagt aaactcttcc
     2581 cgcacctgtt cgccggtggc cattacctga ctgtgatcaa cgggttcatt tgagacgccg
     2641 gcggccaaat ttgtgatgca cgaaatgccc acgacctgca tgcccatgtg gcgcgcgacg
     2701 atcgcctcag gcaccgtgct catgccgacg gcatccgctc ccagcgcgcg caccatgtga
     2761 atctcagccg gcgtttcgta acttgggccg ctcaacgacg cgtacacacc gcgccccatt
     2821 ttcatgccca tcgcacgcgc ctccgtcaaa acgatctcct gcaattcatg cgcgtaggtg
     2881 ttggacaagt ccggaaagcg cgggccgaag cgttcgtcat tgggccccat cagcggattc
     2941 atgcccaaca agttgatgtg atctgtaatc accatcagcg agcccgggag gaactcgaca
     3001 ttcagtgcgc cggacgcgtt ggtcagaatc agcgtacgca cgccgagcag cttgagcacg
     3061 cggatcggaa aggtgacgtc ttccagcgag tagccttcgt aaaaatgaaa tcgcccctgc
     3121 atcgcggcga cggctgaatc gccgatcttc ccgaccacca aacgaccggc atgaccctcg
     3181 acggtcgcgc gcgcaaagcc gggaatttcg gcgtaaggga tcgcagtcgc ggcggacagt
     3241 tcgtcagcga acccgcccag gccgctgccg aggacgatcg cgatcgggct ttcggtttgc
     3301 gtacggccgc gaatcatgcg cacagctttt tccgcgcgtt cgtaaagtga tgaagagact
     3361 ggttctgctg acatggtgat ctaagccatt acaacaatat ctgactcaag agttcaagcg
     3421 tcagcgggct tccaggcgcc gcggacaacc tgaggattga actctggaac ggatttacct
     3481 ttccttttcg tagggaatgc cgatcgcttt gggggcgcgc gattggccga tgaagccggc
     3541 caggacgacg atcgtgacga cgtaaggaat catctgaatg aattggacgg gaatttcaat
     3601 tggcgcctgg cttgcgaaaa agccacgtag aaaagcaatc gaaacgcgcc aaccaatatt
     3661 ccaaagtcca agcgctaata cgagcgtcgc caaaacttgt aacgcgatat tgcgggtcag
     3721 ggccgagacc tggcgcacaa tgatccatgc caggattaaa gcgaccaaaa cgagtagagc
     3781 ttttactaaa acatccatgg ttacgggaac gccctgcaac tgaatcgtca gggcgtcagc
     3841 gaacccgaac aacaaacacg cgagcattgt ttgcaccgga cgccactttc cgaagatcag
     3901 cgccgccagg gcgatgaagc cgcgaccggc ggtcatgttg cgcgtaaaca gcgatgactg
     3961 cccgatggaa agatacgccc cgccgattcc cgcgagcgct cccgagagaa tgactcccag
     4021 ataacgaatc ttattgacgc taacgccggc ggcatcggct gcctcaggat tttcgccaac
     4081 cgcacgcagg cgcaagccga acggggtgcg gtacaaaacg taggacgtca ccaacacaag
     4141 gaccacggcc aacacggtga cgatattaac ctcggtgaaa attcgccact gcggaacaaa
     4201 gcctggcaga agccgcgaca ggttgggcag cagctgttcc ttgggaatct gcggcgtcga
     4261 gcccgaagaa agaaacatcg cgccactcag gacggccggt aacccgagaa acatgatgtt
     4321 gatgccggtg ccggtcacga cttgatcggc tttgaacttg atgcaagcca gcgcgatgat
     4381 catcgcgacc gcgatgcccg ccaccatggc cgctcccata ccaacccacg ggctcgccgc
     4441 gtagaaagtg accgaggcgg ccgtgaaagc tccggcgagc atcaagcctt ccagggcaat
     4501 gttgatgact ccggctcgct cggaatacaa acccccgatc gatgccaaca ccaaaggcgt
     4561 cgcgagccgc aacgtggaaa acaaaagcga gatggtgaac agttggcgca tcgaaaaaag
     4621 gtactttgta ctttgtactt tgtactttgt actttgtact ttgctcgcta gcgcgacttg
     4681 gcgcgctcat ctaccgaccg aagaaatgcg ttgagctttg gcgacaactc ctgtaccaga
     4741 acgcgaagtt tcttgacctc cgactgcgac agcaacttcc tcgtgtaaga acgacgaagc
     4801 caatgaagag tttcgtagag tgagccacgt gccattcgga cgaatcgccg gttatccacc
     4861 aaacttcctc ggccgcttcc ctctgcaatg ttggcaccta tgctatctgc cgacctcacg
     4921 atctgtttgc caactgtgtc acgggcaagc ggattccaag ttacaacgat attccaaatg
     4981 ctgtcggcga tcttctctga caattgataa acctgcagtt tctcgaaatt cgttctttcc
     5041 atgggagtct ccaatctgaa tctcaacttt gaattcacgt caaagcacca agtacaaagc
     5101 actaagtacg aattcttttc agcaacccta atttcttaat cggtccgcgg aacatcgctt
     5161 cagccgcaac aaagacgatc acgattccct gcagcatgtc cacgatgtct tttgaaacgt
     5221 gcagagtgta cgcgtcgacg aagattccac cgcgcaacag aatcgcgaac aggatcgccg
     5281 cgagaaaaac tccgaccgga tgattgcgtc ccagcaacgc tacggcaatt ccgacaaagc
     5341 catagttcgc cgagaaaccg tcatagtagg tatagcggta acccagcacc tcgtttattc
     5401 caaccatgcc ggccagaccg ccggaaatcg ccatggccag aacgatttgc ttgcgcaccg
     5461 aaatgccacc gtattcagcc gcgctggggt ttgcgccggt cgcgcgaatc tcatagcccc
     5521 acttcgtttt ccaaagcagg atgtaaacga acacgcacgc gagaatcgcc agaatgaaag
     5581 cgagattcac gggaatccgt tcgggcagac cgggaataaa ttttcccagc cgcgcaatgt
     5641 gcgcgctacc actgaccgga gc
//
LOCUS       DATDBY010000028         8100 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1171049, whole genome shotgun sequence.
ACCESSION   DATDBY010000028 DATDBY010000000
VERSION     DATDBY010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8100
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1171049"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1523
                     /locus_tag="VIT19_00640"
     CDS             <1..1523
                     /locus_tag="VIT19_00640"
                     /inference="COORDINATES: protein motif:HMM:NF013570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alanine--tRNA ligase-related protein"
                     /protein_id="HEY5837507.1"
                     /translation="YKELARLYDTFGTPRDLIRVSMEERGVEIGEDEFLQNFDLALQE
                     LQQASGVGKTEQKTKTKPLYADLAARVQSPFRGYETTRVDDARVLAIIRGDDEVSDLH
                     EGDDAGVVLDQTPFYAESGGQVGDVGTIIKSAANENDTALVARVADTYSPVQGLIIHK
                     VRIEKGSLKVGDTVTAEVDVFTRDATRRNHTATHLVHAALREVLGAHVKQAGSVVAPS
                     YLRFDFTHYQQMTDEEMQEVERLVNEQILRNVKVDTDVMPVEDAIRGGAMALFGEKYS
                     GMMRVLTVQGFSKELCGGTHVRATGDIGVFKITSDESIASGVRRIRAITGFDAYERFR
                     EDERLIEQAAANLRTSRAELPAVIGKLQEELKKARREAEELRLKIASGAIGTSASNGD
                     EAREVAGVKVLAKEATGLDAAGMRQLSDTLLARIKSGVVVLGRTNDGKVSLIVRTSDD
                     LTKKVPAGQVIKELAPIIGGKGGGKADMAEGGGSQPEKLSEALQASYGVIEKMLAT"
     gene            complement(1531..4797)
                     /locus_tag="VIT19_00645"
     CDS             complement(1531..4797)
                     /locus_tag="VIT19_00645"
                     /inference="COORDINATES: protein motif:HMM:NF019313.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase fold protein"
                     /protein_id="HEY5837508.1"
                     /translation="MQSPRPDAFRPPQVLLSFSWWRYPLEWNAPARLPKIESDFNALY
                     VAPKTETVWAVGNKGLVAVSTDGGATWNKRGISASQVIPASSPTPGNLPKDPPKRPRN
                     NAFLNFPDLIPTAAAANISAKPNDLLEVGSATPAPTVNPGQRDQSIQGATPTASPTRS
                     TDESPSATPARGSVNPPGSLIAVTVLDDVEPTWPPSSGTVAVGEDLGQSTRIFITSDG
                     GATWSIEPLYDWFFSQWRQGKWEVPLVAPTIPSRLYGIYSQYPRTMPSWWTVGPAGGV
                     WLISGPTAIRLQTGSSDDLYGVYFLDDGQRGWVSGSNGAILATSDGGTSWHRQISGTT
                     SQLNAIVFLADGRRGWVVGNYGLVLSTDDGGATWLHRTQGNDASGSYLRFPAPWFFVV
                     LFVVAPLLLRRAKVQPPEAEESVADVLVSDRPLDSSVGDVLAFNSIALGLSRFLRNEN
                     TMPPLTIAIVGEWGTGKSSLMNLLRADLSSYKFRPVWFNAWHHQKEEHMLASLLENIK
                     LQAVPRWWSNRGLVFRAKLLGIRGWRHWLPLVLLVFFIYVLLIYHFGREGTDATYGGL
                     MNWLATAVSHPLETAPNLVPFVPLLAGICTFLGAVWRGITAFGVKPASLLAGVSSGAS
                     IRGLEAQTSFRQKFAVEFNDVTRALGNRSLLIFIDDLDRCRPENVLETLEAVNFLTTS
                     GECFVVIGMAREYVERCVGRAFKDIAEEMMNNLDKPQPVNGEDQSPNGLAKEKRIEFA
                     RQYLDKLINIEVPIPAAKQGQSLQLLLAGAYQPSAPEPKGRWREFKSSTAGLLARHWR
                     VFPALTALAVLLTLGYFLAMSLIAQSPGSPATTQSVATPDASPSPPQTPTPTPTSATV
                     GTSTPTPTPTALPRPSPSPTAEILNERAEIIAGGRGLFSRSLLPGIALLVMLWAGVTV
                     LTRRPDLVVKDSPNFVDALKIWHPLIFSRQSTPRSIKRFMNRIRYLAMRQRKATASEQ
                     SWLRRLFASFNQPGETQPGTGPVTESPVDPIPDEALVALAAIEHFSKSVFGDSAPGVD
                     WPPKKIRSTDSVVTYTYHADLQNLLTTARAEHEKRFGNFDVLKYRDRFVDIAASVEIR
                     "
     gene            5059..5211
                     /locus_tag="VIT19_00650"
     CDS             5059..5211
                     /locus_tag="VIT19_00650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837509.1"
                     /translation="MTARMVRRSHLFVNELWSKVADMAEGGGSQPEKLSEALQASYGV
                     IERMLS"
     gene            5317..7905
                     /locus_tag="VIT19_00655"
     CDS             5317..7905
                     /locus_tag="VIT19_00655"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HEY5837510.1"
                     /translation="MSAAIDHLDFELNVSRVEGNQYLVRAKCGKESAKTTFTNPFSED
                     KKNLIKAEIKANLRSSRKVRSISGPSEVKQLKTWGTQLFEQTITGDVAKLYDKFKAQA
                     DQADRGIRWRLALDTSVDDLPWEFLCREGEFLALNPFSPVVRYMPRKARLTPLKESDQ
                     PLRLLVVIASPCDEVPLDTGAERDRITRAFESLVAQGVVEIDFIEGAETWRQLYEAVT
                     DQDTHILHFIGHGAYDEETQEGVLVMEDAGRNAEKIRSEAFRVLMQGKSRLRLVVLNS
                     CLGTRGDDSTPFSSVAAGLIQAGVPAVIAMQAEISDDAAHEIADTFYKALARNMPVDA
                     ALTEARRKIFLFDLQSLEWATPILYMQVPDGQLFQFKERVGLPAAAPPRPVKLGPETI
                     QGAVAILVRSDNGSEISLSGKSFRIGRGEGNNINVDEQSVSRKHTLLTQVGSTYVIEN
                     FGRGGTLVNDKPISGPVTLKHNDVIGVGEARFKFSSLADLVAEVSKPKPESARRDQTT
                     ASPDANTFESKAAARYEEGVQFMARGNWPEAIKAFGAARTYVPGFLDVDQKLSVCQSR
                     HRIASLYDEAKKQCAARNYDQALVTLSEVQKLDPDLQDTDKIGELSQTGQKHQQAIAE
                     LQRGNLEGGKALLREVLSRHPNFEDAAQRFDNLASGGNGLIAGTGSGTDWIEAGKKWG
                     QEWGKAAWKWFESTPQPQPQLQAPAQGGLAPASPATTAIEPASTTGYAWRTYELADAN
                     LDEISEEIRQYFYANSYESQAVEHNGTWAVQGRKAGLVRLIGMGKAATIVIEATSNGM
                     KVSIGGGQWLEKGAVLVAAGVLTGGLTFITSTIGMVQQQQLLDDLWQVTENIVKKRGG
                     RQLAFG"
     gene            complement(7915..>8100)
                     /locus_tag="VIT19_00660"
     CDS             complement(7915..>8100)
                     /locus_tag="VIT19_00660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837511.1"
                     /translation="VGNAMRTAFDYYRGNILKRFNLTMPNDIEEERVVWLRLAAFLRR
                     GESFYFPTDFRSENKKN"
BASE COUNT         1857 a         2210 c         2417 g         1616 t
ORIGIN      
        1 actacaaaga gctggcgcga ctgtacgaca cgttcgggac accgcgcgat ctgattcgcg
       61 tgagtatgga agagcgtggt gttgagatcg gcgaagacga gtttcttcag aacttcgatc
      121 tggcgcttca ggaactgcaa caagcgagcg gagttggaaa gactgaacag aaaaccaaga
      181 cgaaaccgct ctacgcagat ctcgctgcgc gcgttcagtc ccccttccgt ggttacgaaa
      241 cgacgcgcgt cgacgatgcc cgggtgctcg cgatcattcg gggtgatgat gaagtttctg
      301 acctgcacga gggcgatgac gccggcgtgg tgctcgacca gacaccgttc tatgccgaga
      361 gtggtggcca ggtgggcgac gtcggcacga tcattaagtc ggcggcgaac gaaaacgaca
      421 cggcacttgt cgcacgcgtg gctgatacat actcgcccgt gcagggcctg atcattcaca
      481 aggtcagaat cgaaaaaggc tcgctcaagg tcggcgacac cgtcactgcc gaagtcgatg
      541 tcttcacgcg cgatgcgacg cgacgcaatc acacggcgac ccaccttgta cacgcggcgc
      601 tgcgcgaagt cctgggtgcg catgtgaagc aggcgggctc agtcgtggcg ccgagttacc
      661 tgcgctttga cttcacgcat taccagcaaa tgactgacga agagatgcag gaggtcgagc
      721 ggctggtcaa cgaacagatt ctgcgcaacg tgaaggtcga cactgacgtc atgccggtcg
      781 aagacgcgat tcgcggcggc gcgatggcgc tgttcggcga aaagtattcg gggatgatgc
      841 gcgtcctgac cgtgcaggga ttttcaaaag agctctgcgg gggcacgcac gtgcgcgcca
      901 ccggcgacat cggcgtcttc aaaattacga gcgacgaatc gatcgcttcc ggagtgcgtc
      961 gcattcgcgc catcaccggc ttcgacgctt acgaacgttt ccgcgaagac gagcgtttga
     1021 ttgaacaagc cgccgcgaac ctgcgcactt cgcgcgcgga actccccgcg gtcatcggga
     1081 agttgcaaga ggaattaaaa aaagcgcgcc gcgaagcgga agagttgcgt ttgaagattg
     1141 ccagcggtgc aattgggaca tccgcatcga acggcgacga agcgcgggaa gttgccggcg
     1201 tgaaagtcct cgccaaagaa gccaccggcc tcgatgctgc cgggatgcgc cagctttccg
     1261 atactttgct cgcccgcatc aaatcgggtg tcgtcgtgct cggccgcacg aacgacggca
     1321 aggtttcact gattgtgcgc acgtcggacg acctcacaaa gaaggttccg gccgggcagg
     1381 tcatcaaaga actcgctccg atcatcggcg gcaaaggggg aggcaaagcc gacatggccg
     1441 aaggcggcgg cagccaacct gagaaacttt cggaagcact gcaagccagc tatggggtga
     1501 tcgagaagat gctggcgacc taatcgccag ctagcggatt tcaacgctcg cggctatatc
     1561 cacaaaccgg tcgcgatact tcagcacatc aaaatttccg aaacgtttct cgtgctctgc
     1621 tcgcgctgta gtcagaagat tttgcagatc cgcatgatag gtataggtga caacgctgtc
     1681 ggtggacctg attttctttg gcggccagtc cacccctggc gcgctatctc cgaacacaga
     1741 cttactgaag tgttcaatgg ccgccaatgc gaccagtgcc tcatcgggaa tcggatcaac
     1801 tggactctcg gtcacagggc cagtgcccgg ctgcgtctct cctggttgat taaatgatgc
     1861 gaataaccta cggagccagg actgttcgct cgcggtcgct tttcgttggc gcatcgccag
     1921 gtagcgaatg cgattcatga aacgcttaat cgatcggggc gtcgattgtc gtgaaaagat
     1981 cagcgggtgc caaatcttca gcgcatccac aaagttcggc gagtccttca cgaccagatc
     2041 cggccggcgc gtcagaactg tcactccagc ccacaacata accaacaggg caatgcctgg
     2101 tagcaagctt cttgagaaga gacctcgtcc gcccgcgatg atctcggcgc gctcgttaag
     2161 gatttcggcg gtcggagacg gagacggtct cggcaaagca gttggggtcg gcgtcggagt
     2221 gctcgtaccc acggtcgctg aagtaggcgt cggggtgggc gtctgaggcg gactcggtga
     2281 agcgtctgga gtcgcaactg actgcgtggt cgcaggtgag cccggtgatt gagcgatcag
     2341 gctcatcgcg agaaagtaac cgagcgtcaa cagcacagcc aaagcggtta acgccgggaa
     2401 cactcgccag tggcgcgcaa gcaaaccggc agtcgacgat ttgaattccc gccaacggcc
     2461 tttcggttca ggcgcggacg gctggtaagc gcccgccaac agaagctgca gcgactgtcc
     2521 ttgcttcgct gccgggatcg gcacttcgat gttgataagt ttatccaggt actggcgcgc
     2581 gaattcgatc cgtttttcct tcgccaggcc attcggggat tgatcttcac cgttaacggg
     2641 ttgcggtttg tcgagattgt tcatcatctc ttccgcaata tctttgaacg cgcggcccac
     2701 gcagcgctcg acatactcgc gcgccatgcc gatgaccacg aaacattcac cggaggttgt
     2761 caggaagttc accgcttcga gcgtctccaa aacgttctca ggccggcagc gatcgagatc
     2821 gtcgatgaag atcaacaggc tccggttacc caaggcccgc gtcacgtcat tgaattcgac
     2881 ggcaaacttc tgccggaaac ttgtttgagc ttcgaggccg cggatgcttg cgccggatga
     2941 gacgccggcc aagagactgg cgggtttaac tccgaaagcg gtaatcccgc gccagaccgc
     3001 accgagaaat gtgcagatgc ccgcgagcag tggcacaaat ggaaccaggt tcggggctgt
     3061 ctccagcgga tgtgaaactg ctgtcgctag ccagttcatc aggccgccat aagtcgcgtc
     3121 tgttccttcg cgtccaaagt ggtaaatcag caacacgtaa ataaagaaca ccagcaggac
     3181 gagcgggagc cagtgacgcc aacctcgaat gccgagtagt tttgcgcgga acaccagtcc
     3241 acgattgctc caccaccgcg gtactgcctg aagcttgatg ttctcaagca gcgacgccaa
     3301 catgtgctct tctttttggt gatgccacgc gttgaaccag accggccgga atttgtacga
     3361 actcagatcg gcgcgcagca gattcatcag ggagctcttg cctgttcccc actcgccgac
     3421 gatcgcgatc gtcagcggcg gcatcgtgtt ttcgtttcgc aaaaatcggg aaaggccgag
     3481 cgcgattgag ttgaaggcga gaacgtcgcc gaccgatgaa tcaagcggcc ggtctgagac
     3541 gagtacatcg gcgaccgatt cttcggcctc aggcggttgc acctttgcgc gccgcaacag
     3601 aagcggcgca acgacaaaga gaaccacaaa aaaccagggt gccggaaacc taaggtagct
     3661 gccactagca tcgttcccct gagtgcgatg caaccatgtc gcgccaccat cgtcggtcga
     3721 aaggacgaga ccgtagttcc cgaccaccca ccctcggcga ccgtcggcaa gaaagacaat
     3781 cgcgtttaat tgactggtcg tgccactgat ttgacggtgc cagctcgtgc cgccgtcgga
     3841 cgtggcgagg attgcgccgt tgctgcccga aacccaaccg cgttgaccgt catctagaaa
     3901 gtaaaccccg taaaggtcat cagaactgcc cgtttggaga cgtattgcgg tcggacccga
     3961 tataagccaa acgcctcccg ctggcccaac agtccaccac gacggcatag tgcggggata
     4021 ctgagagtaa atgccatata aacgtgacgg aatcgtaggc gcgaccaacg gtacttccca
     4081 ctttccctgc cgccattgcg aaaaaaacca gtcgtacaac ggctcgatgc tccatgtcgc
     4141 tcctccgtcg gaagtgatga atatcctggt cgattgtccc aggtcttcac ccacagcgac
     4201 ggtgcctgaa gacgggggcc acgtcggctc gacgtcatcg agaacagtta ctgctatgag
     4261 ggagcccgga gggttaacag atccccgtgc cggtgttgcc gatggggatt cgtctgtgga
     4321 acgggtcgga gatgcagtcg gcgtggcgcc ctgaattgat tggtcccgtt gccccggatt
     4381 gacagtcggc gcaggagtcg cactccccac ctccaacaag tcgttgggtt tagccgaaat
     4441 atttgcggct gctgcggttg gaatcaggtc aggaaaatta agaaaagcgt tattgcgggg
     4501 ccgtttggga gggtcctttg gaaggtttcc cggtgtcgga gacgaagccg gaataacctg
     4561 acttgcggag ataccacgct tgttccaagt agcacctccg tccgtgctga ccgccactag
     4621 tcctttgtta cctacggccc agacagtttc cgtcttgggc gccacgtaaa gtgcgttgaa
     4681 gtcgctttcg atcttcggca agcgcgcggg tgcattccac tcaagcggat aacgccacca
     4741 actaaacgag agcagcacct gcggcggtcg aaatgcgtcc ggtcgaggtg actgcacgat
     4801 tgtaagtacg cttgcggcaa tgacgataac aagagcgatc cacaagcgaa tcgcaaaagg
     4861 caccgcgaac cagcccccgg gcgactgcgc cctatgtgaa gcgcttgccg gatctgaact
     4921 ggaggtgttc ggtgcggtca tcgtcgtccg actttttagc gcgcgaagcc gaattgttca
     4981 gcttcgagag atgacgccgt cacatgaaag gtatggtcgc gttgggtcgt ctgtgagagc
     5041 gcctgagttt tgactcgatt gacggctcgc atggtaaggc ggtcacattt gttcgtcaat
     5101 gaattatggt cgaaagtcgc cgacatggcc gaaggcggcg gcagccaacc ggagaaactt
     5161 tcggaagcac tgcaagcgag ctatggcgta attgagcgca tgctcagttg acgggtgctt
     5221 tctgcggaat cgctccattt tcaaaaacgt tgcattagct cttgctgctg cgtacaattt
     5281 cggccactca aacccttaac ccacggaggg ccagccatga gcgccgcaat cgaccacctt
     5341 gatttcgaac tcaatgtctc gagagttgaa ggtaaccaat atctggttcg cgccaagtgc
     5401 ggcaaggaat cagctaaaac cactttcacg aacccattca gcgaagacaa gaagaatctg
     5461 attaaggccg agatcaaagc caacctgcgt tcctcgcgca aagtacgaag catcagcggt
     5521 ccgtcggaag tcaaacagtt gaaaacgtgg ggaactcaat tgtttgagca gaccattacg
     5581 ggcgacgtgg cgaagcttta cgacaaattc aaggcccagg cggaccaggc cgaccgcggc
     5641 attcgttggc gattggcgct ggacacttca gttgatgatt tgccgtggga gtttctttgt
     5701 cgcgaaggcg aattcctggc gctcaatccg ttcagtcccg tcgttcgtta catgccgcgc
     5761 aaggctcgtc tgacgccgct gaaagaatct gatcagccgc tccggctttt ggtcgtcatc
     5821 gccagtccct gtgatgaagt cccgctggat accggcgccg aacgagatcg aataacgcga
     5881 gcatttgaat cgctggtggc gcagggagtg gtcgaaatcg acttcatcga aggggctgaa
     5941 acctggcggc aactttatga agccgtgacc gatcaggaca cgcacatttt gcactttatt
     6001 ggccatggtg cttacgacga ggaaacgcag gaaggcgtgc tggtcatgga ggatgccggc
     6061 cgaaacgccg aaaagatccg gagcgaagcg tttcgggttc tgatgcaggg caaatcgcgc
     6121 ttgcgattag tggtgctgaa ttcatgcctg gggacgcgcg gcgatgacag cacgccattc
     6181 tcgagcgtag cggctggttt gattcaggcg ggtgttccgg cggtgattgc gatgcaggcg
     6241 gaaatcagcg acgacgcggc acacgaaatt gccgacacgt tttacaaggc gctcgcacgg
     6301 aacatgccgg tcgacgcggc gctgactgaa gccagacgaa aaattttcct atttgatttg
     6361 cagagcctgg aatgggcaac gccgattctc tacatgcaag tccccgatgg gcagttgttc
     6421 cagttcaagg aacgggtcgg gcttcctgct gccgctcctc ccagacctgt gaaattggga
     6481 cccgaaacaa ttcagggcgc ggttgcgatc ctggttcgat ctgacaatgg gtctgagatt
     6541 tcgttgagcg gaaagtcgtt cagaatcggc cgcggcgagg gcaacaacat caacgtcgac
     6601 gaacagagcg tgtcgcggaa gcacaccctg ttaacgcaag ttggttcgac gtatgtgatc
     6661 gaaaattttg gtcgtggcgg caccctggtg aacgacaagc cgatctcagg gccggtcacg
     6721 ctgaagcaca atgacgttat cggcgtcggg gaggcgcggt ttaagttcag ctcgttggct
     6781 gacctggtgg ccgaagtcag caaaccaaaa cccgaaagcg cccgccggga ccagacgaca
     6841 gcttcgcctg acgcgaatac tttcgaatcc aaagccgcag ctcgttacga ggagggtgtg
     6901 cagtttatgg cgcgtggcaa ttggccggag gcgatcaagg cttttggcgc cgcgcgcaca
     6961 tacgttcccg gtttcctcga tgtagatcaa aagctcagtg tttgccaatc acgccaccga
     7021 attgcgtcac tctacgatga ggcgaaaaaa cagtgcgcag ccaggaatta cgatcaggca
     7081 ctggtcactt tgtctgaggt tcagaagctt gatccggatc tgcaagatac ggacaagatc
     7141 ggtgagttaa gtcaaaccgg acagaaacat caacaagcca tcgccgaatt gcagagagga
     7201 aacctggagg gcggtaaagc gctgctgcgc gaggtgctca gccgccatcc caatttcgaa
     7261 gacgccgcgc agcgtttcga taatcttgcg agtggcggta atggcttgat tgccggtaca
     7321 ggctcgggta cggactggat cgaggcagga aagaaatggg gtcaggagtg gggcaaagca
     7381 gcctggaagt ggttcgagtc aacaccccaa ccccaaccgc agctgcaagc gccggcgcag
     7441 ggggggctcg cgcctgccag ccctgccaca accgcgatcg agcctgcgtc aacgactggc
     7501 tatgcgtggc gtacttatga attggctgat gcgaatctcg atgagatttc cgaagagatt
     7561 cggcaatact tctacgcgaa tagctacgag agccaggccg tcgagcataa cggcacttgg
     7621 gccgtgcagg ggcgtaaggc cggtctggtc agattaatcg gaatgggtaa agctgccacg
     7681 atcgtgattg aagcgacgag caacggaatg aaagtttcaa tcggcggagg tcaatggctc
     7741 gaaaaaggag cagtcctggt ggccgctgga gttttgacgg gcggcctcac gttcatcacc
     7801 agcacaatcg gaatggttca gcagcaacag ctgttggacg atctgtggca ggtcactgag
     7861 aacattgtga aaaaaagagg cgggcggcag cttgcctttg gataattact cttcttagtt
     7921 ctttttattc tcgcttctga agtccgtagg aaaataaaag gactcaccgc ggcgcaggaa
     7981 ggcggcaagt cttagccaaa cgacccgctc ttcctcgata tcgttaggca tcgttagatt
     8041 gaaccgcttc aggatgttgc cccggtaata gtcgaaggct gttcgcatcg cattgcctac
//
LOCUS       DATDBY010000029         8676 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1171018, whole genome shotgun sequence.
ACCESSION   DATDBY010000029 DATDBY010000000
VERSION     DATDBY010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8676
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1171018"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..556
                     /locus_tag="VIT19_00665"
     CDS             <1..556
                     /locus_tag="VIT19_00665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837512.1"
                     /translation="RDPRTRNIRVFGHTYSKSSGREEVETITPDMVAFGVARISSTSV
                     VEVWVETLDSSLGEDFGWKREAGAIVRDDLAQASGDPTITNFTVTQRRARAKELMIHR
                     EFEALVEESLIDQVFVSPTLWKGSVTLPITPASGVQKRYRLVVAEYEEYLVDDDVDDR
                     GGDAYDRLLMSKDRRLVFIEYVEL"
     gene            1088..3598
                     /locus_tag="VIT19_00670"
     CDS             1088..3598
                     /locus_tag="VIT19_00670"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /protein_id="HEY5837513.1"
                     /translation="MAAVVSAAFTGQAGVSSIVFGGRRYFRLDLSDFPSSAFTFTCLL
                     RLAGGGPLMMYGSPDEGSDINGQTTFLSIQINGASIEISSQSGQVTVPGTALADGHWH
                     RLAARFVQVPDPRGRASIDLFIDGFLVSGASSIILPMANDQGPARTLNRVNTLALGIR
                     PHDPGTDNHAVPNSFFEGQLRDVRIWSSALSDAAVVQSDFASPVNGTEAGLYLALPLD
                     DAHLDVASGRSLDLTSAHRNALWVAVPSVAASFGLINNFVGFPLNDRTVQMWVRCGID
                     AGPTTLFSYGPVRSSDASNDEGQPWRVEARQAVQDGSWHHLSVVVDSKAQTEVLYVDG
                     ILKTSTRSVGSGPLANQMLLLGAHWATDADEQIFTGQMRDVRLWSTARTAEQIATDAR
                     GTTPTDDSNLVARWPLDPAAPGQDVSGNDHNLSFNAVHVSEGQQFVDPGAGYFTTDTV
                     ISGRPCHLIISNLDELVIAPVGATGQPPGTKTVPIDKDLLVFANRLTIYGKIHVPGGR
                     IEIYTKRLAVVGGSQPELSTEPEPRPRTLPEVAGGGFLPGTRPTLKSEMNRLPISAQA
                     FLERGGSVKTLALPIALPEDWYAAQAGIWGNPDGFPQLGIPPASVEQSGLPGAGASAS
                     PSASGVDAVISELPSIRIVARRVHLTEKLKLTARGGAGAPGQSGQTGANGSDAKAFFS
                     PIALVTRGGPNPSFGGFGGNGGDASPGGSGGAGGLIEWVVFDDPSASQWFDFDAGGGP
                     PGEDGIPGAGGRGGLGSLFTRESTFILQVPRSPDGAPGTLKGARSTKGKDGTVQALPP
                     NPLLMFRLKFFLQLLSSAEERGTTGYQDCLIDSDPDPV"
     gene            3785..6004
                     /locus_tag="VIT19_00675"
     CDS             3785..6004
                     /locus_tag="VIT19_00675"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEY5837514.1"
                     /translation="MKANLQVRNQTGGTATVTVAHLGSANPVAEFHVWPDLAAGETSD
                     SFEINFDPAAADKWYVSAAVRDGLAPGIYETAGSRGRPLLKWSVPLRVENQDLIMTVT
                     NRRFRIILPGFQFDGQLDKSGPFTRQIRNVFVLMLENRSFDHMFGWTDIEGFNADGSG
                     ATKIDGAKPQPEGGNDPTFFNLYNNQIIACAPAPAAAMNLSADPGHEWEDMMEALCGA
                     GAVLGQGGSYPAITRSGFVTSYARALDKADVPQNPQHLAEIMSGVAREPGLILHRIAE
                     QYAICDRWFCSLPGPTWPNRFFAVVGSSGGLEISPTKGQMFASEYLRGFTMDHGSIFT
                     ALRAANLDYRIYKDHDNSFAPNPVDFRGMGGGTIAAGLTGVHRAEVHKFRDFAEDLQG
                     RYPYQFTFIEPHYGDAFDDTYFGGSSQHPMDYLEGGERLIAATYKAIRNSSHWEHSLL
                     IITYDENGGLYDHVTPPPTVAPNDTSRYSKRSFDFKQLGPRVPAVIVSPFIPPFTIDK
                     HIYDHTSIISTVFSLFAPNTFLTERDRQARNLTALIDHQLRLENDCPLSFDVPAMQEK
                     RSLTLTNQQARDADPLPESGNVIGFIHLAAKTDFELSDGSQETADAIVQKIKSFQTHG
                     AARAYAADVLTRSNDDETDGDKIDDWVYGTAAAALIAQVAGDVSMEVSDVNGLLTRVF
                     ATSFKRNLNADGLKSDRVGLLLQKAEEYEANQTEIIDEEDDVYLIPRGTSALLRSWS"
     gene            complement(6017..8014)
                     /locus_tag="VIT19_00680"
     CDS             complement(6017..8014)
                     /locus_tag="VIT19_00680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837515.1"
                     /translation="MNRKQSVALVVLIALLVPGFYFSTRTHAQNPSPSPSPTPENPFA
                     PEVAPALPPGMTGSDTSDPRANLTPGMYDAGEAALGLKHLLLLKKPDAFQLGSDNPED
                     PKVQKTLAQLGIGDTSKLEKSALLPTAQLAFANSDLAFQGNRLFMGNFYGLNIYDIST
                     PASARLLTSIICPGGQNDVSVYKNLLFMSVEMANGRLDCGPQGFRPGPPPPAGQEKDP
                     PPPPAEKDRFRGVRVFDITDVSNPRQVAAVQTCRGSHTHTLVVDPKDKRNVYIYVSGT
                     SYVRRNEELAGCSGDQPEKDPNTALFRIEVIKVPLAAPQNAKVVSSPRIFIDPRTGNV
                     AGLTSGPTHGKAGEAMEKPSLTNQCHDITVYSQLGLAAGACSGNGILLDIRDPVHPKR
                     VDAVNDPNYAYWHSASFSNDGKKVVFTDEWGGGLGARCRANDPNKWGANAIFNLRNKK
                     LSFASYYKMPAAQTDSENCVAHNGSLLPVPGRDIKVQAWYQGGISIMDFTDAEHPVEI
                     GYFDRGPILPHMLVLGGDWSAYWYNGYVYASEIARGLDIFELTPTKDLTQNEIDAAKT
                     VRMTEFNVQNQQKIVWPRKLVVARAYLDQLERSQALPANQIASVREAIETVESSRMSR
                     ASLAKLRGVATLAQKSAATAKSAADSSRLRALAEVLMRPAP"
     gene            complement(8226..>8676)
                     /locus_tag="VIT19_00685"
     CDS             complement(8226..>8676)
                     /locus_tag="VIT19_00685"
                     /inference="COORDINATES: protein motif:HMM:NF015658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HEY5837516.1"
                     /translation="QAVEMVALIDSHTTNKELRLLGARISTSQSDEMAFMKRWLVARG
                     EPVSHAMPSKGTHMPGMDMTNHATLMPGMLTPKQMDALRKAKAAEFDNLFLTGMIQHH
                     NGALLMVKELFDTAGAGQDAELFSFATDVDSGQRAEIRIMEKMLDGQ"
BASE COUNT         1809 a         2450 c         2466 g         1951 t
ORIGIN      
        1 acgagatcca cggacccgaa acattcgcgt cttcggacat acttattcga agtcgagcgg
       61 acgcgaggaa gtagaaacca tcacgcccga catggtggcg ttcggtgtag ccaggatctc
      121 gtcgacaagt gtcgtcgaag tgtgggtcga gaccctggat tcttctctcg gcgaagactt
      181 tggttggaaa cgagaggcgg gagcaatcgt tcgagatgat ctggcccagg cgagtgggga
      241 tccgactatt acgaacttca ccgtcaccca gcggcgtgcg cgcgccaaag agctaatgat
      301 tcaccgcgag tttgaagctt tggtggaaga aagcttgatc gatcaggtct ttgtcagtcc
      361 gacactctgg aaaggcagtg taactttgcc gataacgccg gcatcaggcg ttcagaaacg
      421 ttatcgcctg gttgtcgccg aatacgagga gtatttggtt gatgacgacg tcgacgaccg
      481 gggtggggac gcttacgatc gtctcctgat gtcgaaggat cggcgtttgg tcttcatcga
      541 atacgtcgag ctatagcgac gcgtcgtgat ctcattggat ccctggcggg cgcccgcgcg
      601 tcagggaacc agtttctcga gtggtttgat tcggggaatg gtgattttcc tggtcacaag
      661 gtcatagcct cgcacaaaaa tctggaaatt ccgagaccca gaatccacag attacacaga
      721 taatctcttt cttggtcttt ggtctttggt cccacgcgga gtgttaggaa gaccggcgga
      781 accaggtctt cgattcttga agcccgaagg gccgtcatga attagcccac gaccgcaggg
      841 tcgtggttgg cttctctaga acccaacttg agtaattgac acgaagccct tcatccctca
      901 tcctgccgtc ttcgcctttt gccttcagtg agcgtagctc aaagctagag cgccggcttc
      961 ccaagcgggc ctcgtcgcac gcaccaatgt tccgcagcct taccgcagta cctcaggatc
     1021 aaaggcagtc ctgagtttga ataatagttc attcgtagtc ccactctggt aaataggagc
     1081 agcattaatg gcagcggtcg tctcagcagc attcaccggt caagccggtg tttcctcgat
     1141 cgtgtttggc gggcggcgct actttcgcct ggatttgtct gacttcccgt cgtcagcatt
     1201 caccttcacc tgtcttcttc gtctcgcggg cggtggtccg ctgatgatgt acggtagccc
     1261 cgatgaggga tcggacatca atggccaaac gacttttctc tcgattcaga ttaacggggc
     1321 ctccattgaa atcagtagcc agagtggaca ggtgaccgtg ccaggcactg cactcgccga
     1381 cggtcactgg catcgtttag cagcgcggtt cgtccaggtt cccgacccca ggggccgggc
     1441 cagtatcgac ctatttatcg atggattcct cgtcagcggt gcatcctcaa taatcctgcc
     1501 aatggccaat gaccagggcc ctgccagaac gctcaatcga gtcaacacac tggctctggg
     1561 aatcaggcca catgatccag gcaccgataa ccatgctgtg ccgaacagct ttttcgaggg
     1621 ccagttgcgc gacgtacgca tctggtcgtc cgcactaagc gatgcggccg tcgtgcagag
     1681 cgattttgcg tcgcccgtta acggtactga agccgggctg tacctcgcgc ttccgctcga
     1741 cgacgcgcat ctggatgtcg cgtcgggtcg ctctctcgat ctcacttcgg cccaccgcaa
     1801 cgcgctgtgg gttgcggttc ccagtgttgc agccagcttc ggcctcatca acaatttcgt
     1861 cggctttcca ctgaatgatc gcaccgtgca aatgtgggtg cgctgtggta tcgatgccgg
     1921 tccaactact ttgttcagtt atgggccggt tcggtcgtcc gacgcctcga atgatgaagg
     1981 gcagccatgg cgcgtcgagg cacgccaggc ggtgcaagat ggcagctggc atcatctgtc
     2041 agtcgttgtc gatagcaaag cgcaaaccga agtgctttat gtcgacggca tactcaagac
     2101 ctcaacccgt tccgtcgggt cgggcccgct ggcgaatcag atgttgctac tcggagcgca
     2161 ttgggccacg gacgcagacg aacaaatctt taccgggcag atgcgtgatg tccgcctgtg
     2221 gtccacggcg cgcaccgctg agcagattgc gactgacgca cgcggcacga ctcctaccga
     2281 cgactcaaat ctggtggcgc gctggccgct cgatccggca gcgccgggac aggacgtttc
     2341 cggtaatgat cacaacttat cctttaatgc ggtccatgtg agcgaaggcc agcagttcgt
     2401 tgatcccggg gccggttact ttacgactga cacggtgatt tctggccggc catgccacct
     2461 catcatttct aacctcgacg agttggtgat cgcgccggtt ggagcgacgg gtcaaccgcc
     2521 gggaaccaaa accgttccca tcgataagga cttattagtc tttgccaaca ggctaacgat
     2581 ttacggaaag atacatgtgc ctgggggccg gattgagatt tacaccaaac gccttgcagt
     2641 tgtgggtggc tctcagccgg aattgagtac ggaaccggag ccacgcccgc gaaccttgcc
     2701 ggaggttgct ggcggaggtt ttctgccggg cacgcgaccg actctgaagt ccgagatgaa
     2761 tcgtttgccc atctcggccc aggcgtttct ggaacgtgga ggatcagtca aaacgctggc
     2821 ccttcctatc gccttgccag aagattggta tgccgcccag gctggcattt gggggaatcc
     2881 ggatggcttc ccgcaactag ggatacctcc agcatcggtg gagcagagcg gattgccggg
     2941 ggcaggggcc tcagcgagtc cttcagcttc tggagttgac gcagtgattt ccgagctacc
     3001 cagcatacgg atcgtcgcca ggcgggtcca tctcaccgag aaacttaaac tgaccgcgcg
     3061 cggcggagct ggtgcgcccg gccagagtgg ccagactggc gccaacggtt ctgatgcgaa
     3121 ggcgttcttt tcccccattg ccttggttac caggggcgga cccaatccat ccttcggtgg
     3181 ctttggcggt aacggagggg atgcgtcccc gggaggctcc ggcggagcgg gtggattaat
     3241 cgaatgggtg gttttcgatg acccgagtgc gagccaatgg ttcgacttcg atgccggagg
     3301 tggcccacct ggggaggacg gcatcccagg cgcaggcggt cgaggaggtt tgggtagtct
     3361 ctttactcga gaatcaacat tcatcctcca ggtcccgaga agtccggatg gcgctccggg
     3421 aactctcaaa ggtgcgcgat caacgaaagg taaagatggc accgtgcaag cgctgccacc
     3481 caacccgctg ttgatgtttc ggcttaagtt ctttctgcaa ctgttgtcga gtgcagaaga
     3541 gcgggggacg acgggctatc aggattgttt aatcgactca gatccggatc cagtctagta
     3601 gggaaaaaca gatcgtgaat gcaccgagct acaaatttgg agtgcgccgg cagagtcccg
     3661 attttatcgg gacggcgacg gcgctttgga tggttgagag attatcccag gcgatatcgc
     3721 gctctgcatg cgccactact cccagtcact tttcagcagc tgctaaaacc agggcgaaac
     3781 taaaatgaaa gctaatcttc aagttcgtaa tcaaactggt ggcaccgcca ccgtaactgt
     3841 cgcgcacctc ggttcggcaa atcccgttgc ggaatttcac gtgtggcctg atttagcagc
     3901 aggcgaaacg agtgattctt tcgaaatcaa ttttgatccc gccgccgctg acaaatggta
     3961 cgtttcggcc gccgttcgcg atggcctggc acctggcatc tatgaaacgg caggttcacg
     4021 ggggcggcca ttgttgaaat ggagtgtgcc acttcgtgtt gagaatcaag acctcatcat
     4081 gacagttacc aaccgccgct ttcgcataat actgcccggt tttcagtttg atggccaatt
     4141 ggacaagtcg ggccctttta ccaggcaaat ccggaacgtc tttgtgctga tgcttgaaaa
     4201 ccgctcgttc gaccatatgt tcggctggac tgacattgag ggtttcaatg cggatggatc
     4261 aggcgccacg aagatcgacg gcgccaagcc gcagccggag ggtggcaacg atcccacttt
     4321 ctttaatctg tacaacaatc agattatcgc atgcgcgccg gctcccgcgg cggcgatgaa
     4381 tctttccgcc gatcctggtc acgaatggga agatatgatg gaggccctct gcggagcggg
     4441 cgctgttctc ggccagggcg ggtcatatcc ggcgataacc cggagcggtt ttgtcacgag
     4501 ctatgcaaga gcactggaca aagccgacgt ccctcaaaac cctcagcacc ttgccgaaat
     4561 aatgtcagga gtggctcgcg aacctggact catccttcac cggatcgcgg aacaatatgc
     4621 aatttgcgat cgctggtttt gctctctacc cggacctacc tggcccaatc gcttcttcgc
     4681 ggtggtaggt tcgtcgggag gattggaaat ttcaccgacc aaggggcaaa tgttcgccag
     4741 cgagtacctg cgcgggttca cgatggacca tggaagtatc tttacagcgc tgcgagctgc
     4801 gaacttggac taccgaattt acaaggatca tgacaacagt ttcgctccta acccggttga
     4861 tttcagaggg atggggggcg gcacgattgc cgccggcctt accggtgtcc atcgagctga
     4921 agtgcacaaa ttcagagact ttgccgaaga tctacaaggc cggtatccat accagtttac
     4981 cttcatcgag cctcactatg gggatgcctt tgacgatact tatttcggcg ggtcatcaca
     5041 acaccctatg gactatctcg aaggcggaga gagactgata gcggccactt acaaagcgat
     5101 tcgaaactcc tcgcactggg agcacagtct tctgatcatc acttacgatg aaaacggagg
     5161 cttatatgat catgtgacac cgccgcccac tgttgctccc aacgatacct cgagatactc
     5221 aaagcgcagt ttcgacttta agcagctcgg tccacgagtt ccggccgtga ttgtttcacc
     5281 cttcattccg ccattcacga tcgacaaaca tatctacgat catacttcga tcatttcgac
     5341 tgtcttttct ctctttgctc cgaatacctt tctgacggag cgggaccgtc aagcgcgcaa
     5401 tctgacagca ctcatcgacc accaactgcg actcgagaat gattgtccgc tctcatttga
     5461 cgtacccgcg atgcaggaga aaagatcact cactctcact aaccagcagg ctcgcgatgc
     5521 agatcccctg cctgagagcg gtaacgtgat cgggtttatc catctcgcgg cgaaaaccga
     5581 tttcgagctc tccgatggca gccaggaaac cgccgatgcc atagttcaaa aaattaagag
     5641 ctttcagacg cacggcgccg cgcgcgccta cgccgcagac gttttgacgc gatctaacga
     5701 tgacgaaacc gatggcgata agatcgacga ttgggtctat ggcaccgccg cagccgcatt
     5761 gatcgcgcag gttgcgggtg atgtcagcat ggaggtttcg gatgtcaacg ggcttctgac
     5821 aagggtgttc gctaccagct ttaagcgaaa cctcaatgcc gacgggctca aatcggatcg
     5881 ggtgggattg ttgttgcaga aggccgagga atatgaagcc aaccagacag agatcatcga
     5941 tgaggaggac gacgtatacc tgatcccacg cggaacttca gcgttgttac gcagttggtc
     6001 ttgacagtgc tctcctctag ggtgcaggtc tcatcaaaac ctctgccaac gcccgcaacc
     6061 gagatgaatc ggccgcgctc ttcgcggttg ccgcgctctt ttgtgccaac gtcgccacgc
     6121 cacgcagctt cgcaagcgag gcgcgactca tgcgcgaact ctccaccgtc tcaatcgcct
     6181 cgcgcacact cgcaatctga ttggcgggca gagcctgcga acgctctaac tggtcaagat
     6241 acgccctcgc caccaccaac ttgcgcggcc agacgatctt ttgctgattc tgcacattga
     6301 actcagtcat ccgcactgtt ttcgcggcgt cgatctcgtt ctgcgtgaga tccttcgtcg
     6361 gcgtcagctc aaagatatcc aggccgcgag cgatctcaga ggcgtagacg tagccgttgt
     6421 accagtaggc tgaccagtcg ccgcccagca cgagcatgtg gggaagaatc ggtccgcgat
     6481 cgaaatagcc aatttcgacc ggatgttccg catcagtgaa gtccatgatt gaaatgccgc
     6541 cctggtacca agcctgcact ttgatgtcgc gtcccggcac cggaagaagc gagccgttgt
     6601 gcgccacaca attttcgctg tccgtctgcg cggccggcat tttgtagtag ctggcgaagc
     6661 tcagcttttt gttccgcaag ttgaaaatcg cattcgcacc ccacttgttt ggatcgttag
     6721 cgcggcagcg cgctccgagt ccgccgcccc actcgtcagt gaagacgact tttttcccat
     6781 cgtttgaaaa cgaggcggag tgccaatagg catagtttgg atcgtttacc gcgtccacac
     6841 gtttcgggtg aaccggatct ctgatgtcca ggaggattcc atttcccgag cacgccccgg
     6901 ccgccaatcc gagctgcgag tacacggtga tgtcgtgaca ctgattggtg agcgatggct
     6961 tttccattgc ctctcccgct ttgccgtgcg tggggccgct cgtgagtccc gcgacgttac
     7021 ccgttcgggg atcgataaaa atgcgcgggc tggaaacgac tttggcattc tgcggcgccg
     7081 ccagcggcac cttgatcact tcaatgcgaa agagtgccgt attcggatcc ttctcgggtt
     7141 ggtcgcccga gcagccggcc aactcttcgt ttcggcgcac gtaagaggtg cccgaaacgt
     7201 agatgtagac gtttcgctta tctttcggat cgacaacgag ggtgtgggtg tgcgagccgc
     7261 ggcaagtttg cacggcggcc acctgtcggg gattgctgac gtcggtgata tcgaaaactc
     7321 tcactccgcg gaaacgatct ttttccgcgg gcggaggagg cggatccttt tcttgtccgg
     7381 ccggtggcgg cggacctggt cggaatcctt gaggcccgca atcgagtcga ccgttcgcca
     7441 tctcaaccga catgaacaag agattcttgt aaaccgacac atcgttctgt cctcccgggc
     7501 agattatcga tgtcaaaagg cgggcgctcg cgggcgtcga gatgtcatag atattcaagc
     7561 cgtaaaaatt ccccatgaag aggcggttgc cctggaatgc caggtcagag tttgcaaacg
     7621 cgagctgggc cgtaggcaac agagcggatt tttccagctt cgaggtgtcc ccgataccca
     7681 gttgggccag ggttttctgc actttcggat cttcagggtt gtcagagccc agttgaaaag
     7741 cgtcgggttt tttaagtagc aagagatgct ttaaacccag ggccgcttcg ccggcgtcgt
     7801 acattcccgg cgttaggttc gcgcgcgggt ccgaagtatc tgagcccgtc attcccggcg
     7861 gcagcgccgg cgccacttcg ggcgcaaacg gattctcagg cgtcggtgac ggcgacggcg
     7921 aagggttttg cgcgtgcgtt cgggttgaga aataaaaccc tggaacaagc aaagctatta
     7981 gcacgaccaa agcgacactc tgttttcgat tcattgttct cctccgaagg ttaccggcac
     8041 cgggcttgct gaaagtctgc ggctgtgccg cttgatgtgc ggaaggcctc tggccttccg
     8101 gcggcaagcc tggctggatt ttgggctttg cccagtgttg gggcggagcc ccgagctcac
     8161 tatcaagctg gacggaagcg catagcgctt ccgcacatca aacggcacag ccgagtcacg
     8221 ttgggctact gcccgtccaa cattttctcc atgattctga tttcggcacg ttggccactg
     8281 tcaacgtccg tcgcaaaact gaacagctcg gcgtcctgac ccgcgccggc cgtatcgaac
     8341 aactctttga ccattaagag ggccccgttg tgatgctgaa tcattccggt caaaaacagg
     8401 ttgtcgaact ccgcggcttt cgcttttcgc agcgcatcca tctgcttcgg cgtaagcatg
     8461 cccggcatga gcgtcgcatg gttcgtcata tccataccag gcatatgagt ccccttcgac
     8521 ggcatcgcgt gtgacaccgg ttcgcctctg gcgacgagcc agcgcttcat gaatgccatc
     8581 tcgtccgact gcgacgtgct gatgcgcgcg ccaagcaagc gcagctcttt gttcgtcgta
     8641 tgcgagtcaa tcagcgccac catttcaacg gcttgt
//
LOCUS       DATDBY010000030         2071 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1379775, whole genome shotgun sequence.
ACCESSION   DATDBY010000030 DATDBY010000000
VERSION     DATDBY010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1379775"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2071
                     /locus_tag="VIT19_00690"
     CDS             <1..>2071
                     /locus_tag="VIT19_00690"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5837517.1"
                     /translation="EVERRGDQRLFLPKLDWHVNDSNVLTVTYNRLRWNSPNGIQTQA
                     TNTRARDNFGDDLVDIDWLTTRLSSTLSSNLLNEFRFQWGRDNETQFSRAPQAGEPTN
                     SIDGRSPQTFITNGLSFGIPEFLDRPAFPDERRWQFANTTTWTQGKHALKFGGDINFV
                     KDIINNLRFIGGEFSYTGANAINDFLFDYTNFTTSGAIRALNPVDVAGQRNRGVCPRI
                     ASATGTNLNTSPFRGGQCYAGNFTQGIGPAGLTMKTTDFNFFIQDDWRITPRLTLNLG
                     LRYEYQRNPDAVAPNPALPQTANKVDDKNNFGPRVGFAFDMTGDGKTSLRGGWGLYYG
                     RVINSTVYSALTNTGLGPTISQQQLTIAANNLPPATSTCGGNPVTAQNCLPIYPNLLV
                     PIGSSTTNIVVRPAVQFFDDDFQLPQIHQGDLIVEREVGRNTVVSASYLFSFGNSLPT
                     FVDTNLPPPARTVTLNIVGGPLAGQNYITPIFVGGRPNTTYAQLTEIRSTIISKYHAL
                     VLQANRRLTDGLQFQINYTLSRAMDNGQGSQTFVANNSPFNAFDPEAEDALSNFDRRK
                     KFVASLVYNTDFAGLRGNAAGHIFNGWTIAPILNAFSGARVTGFISGGISPTAFAFSG
                     SACTPGVIPTATGCSTPGGGANGSGGANRFAGLPRNYFKQPNIWYVDLRLSRRFKITE
                     GTKLEILG"
BASE COUNT          439 a          605 c          579 g          448 t
ORIGIN      
        1 cgaagttgag cgtcgcggcg atcaaaggct gttcctgccg aagctcgact ggcacgtgaa
       61 tgacagcaac gtcctaacgg tgacttataa ccgtctgcgt tggaattcgc cgaatggcat
      121 tcagacgcag gccaccaaca cacgcgcgcg cgacaacttt ggcgatgact tagttgacat
      181 cgactggttg accacccggc tcagttcaac gctttcgtca aacttgttga atgagttccg
      241 tttccagtgg ggacgcgata acgaaacgca gtttagccgc gctcctcagg ccggcgagcc
      301 gacgaactcg atcgatggcc gctcgccaca aacgttcatt acgaatggcc tgagcttcgg
      361 tatccctgaa ttcctcgacc ggccggcgtt tccggatgag cggcgttggc agttcgctaa
      421 caccacgacc tggacgcaag gtaaacacgc gttgaagttc ggcggagaca tcaacttcgt
      481 taaggacatc atcaataacc ttcgttttat cggtggcgag ttcagctaca ccggtgctaa
      541 cgccatcaat gactttctct ttgactacac taacttcacg accagcggag ccatccgtgc
      601 gctgaatcct gtggacgtgg cgggacaacg aaaccgtggc gtctgccctc gtatcgccag
      661 cgcgaccggc accaatttga atacctcgcc cttccgcggc ggccagtgct atgcgggcaa
      721 tttcactcag ggcatcggac cggccggcct gacgatgaag accacggatt tcaacttctt
      781 cattcaggac gactggcgta ttactccgcg cctgacgctg aacctcggtt tgcgttacga
      841 gtaccagcgg aatcctgacg ccgttgcgcc taacccggcg ttaccgcaaa cggccaacaa
      901 ggtagacgac aagaacaact ttggtccgcg cgtcggattc gcgttcgata tgacgggcga
      961 tggtaagacg tcgcttcgtg gcggctgggg cctgtactac ggtcgcgtga tcaattcgac
     1021 tgtttacagt gcgctcacca acacgggtct tggtccaact atttcgcagc agcagttgac
     1081 gattgccgcg aataatctgc caccggcgac atccacctgt ggaggtaacc ccgtcacggc
     1141 ccaaaactgc ctgccgattt atccgaacct gctggtgccg atcggctcga gtacaacgaa
     1201 catcgttgtg cgtccggcgg tccagttctt tgatgacgac ttccagttgc cgcaaatcca
     1261 ccagggcgat ctcatcgtcg aacgtgaggt tggtcgcaac acggttgtgt cggcttcgta
     1321 tctgttcagc ttcggaaatt cgctgccgac ctttgttgac acgaatttgc cgccgcccgc
     1381 gcggacggtg acgctgaaca tcgtaggcgg accattggcc ggtcagaatt acatcacgcc
     1441 gatcttcgtg ggcggccgtc caaatacgac ttacgcacaa ctgacggaaa tccgcagcac
     1501 tatcatctcg aagtatcacg cgctggtgct tcaggcgaat cgtcgtctga cggacggatt
     1561 gcagtttcag attaactaca ccttgtcgcg agcgatggac aacggccagg gatcgcaaac
     1621 gttcgtcgcg aacaatagtc cgttcaatgc gtttgatcct gaggcggaag atgccctgtc
     1681 gaattttgac cgccgaaaga agttcgtggc gagcctggtt tacaacacgg acttcgccgg
     1741 cttacgaggc aacgcggctg ggcacatttt caacggctgg acgattgccc cgattctgaa
     1801 cgcattttca ggtgcgcgcg tgaccggctt catcagcggt ggaattagtc ccaccgcctt
     1861 cgcgttctca ggcagcgcat gtacgcctgg tgtgatcccg acagcgacgg gttgtagcac
     1921 gccgggcggg ggcgccaacg gttcgggcgg cgccaaccgc tttgcgggtc tgccgcggaa
     1981 ctacttcaaa cagccgaaca tttggtacgt tgacctgcgc ctctcgcgac ggttcaagat
     2041 taccgaagga acgaagctgg aaattttggg c
//
LOCUS       DATDBY010000031         3144 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_3020430, whole genome shotgun sequence.
ACCESSION   DATDBY010000031 DATDBY010000000
VERSION     DATDBY010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3144
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3020430"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(254..1327)
                     /locus_tag="VIT19_00695"
     CDS             complement(254..1327)
                     /locus_tag="VIT19_00695"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY5837518.1"
                     /translation="MNTQSTYMQWAKKRPKVKYDLALSGILNLPFAELEATIDDIDLN
                     GDNSYGYSPLVNAIAEHCHVEPESVVTISGGTSMANHLAMAAAIDHGDEVLIEQPTYE
                     PLLALAEYFGLKVKRFSRASENNFQVDLDELQTKVSSRTRLIVLTNLHNPSSALVDEE
                     TVRRTGEIAESVGARVLVDEVYLEAMFENAPRSSVHLGPQFIATSSLTKGYGLHGVRC
                     GWILAEPELAERMRLLHDIFGAVAPHPAERLSALAMRKLPKFVTRAKDILESNRAVLN
                     DFLDSREELTAPRSEIGTTCFPRLEKGSVDSLWTLLNDKYETAFVPGRFFESPQHLRI
                     GMCAEPQLFNEGVQRLAKALDEL"
     gene            complement(1395..2852)
                     /locus_tag="VIT19_00700"
     CDS             complement(1395..2852)
                     /locus_tag="VIT19_00700"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEY5837519.1"
                     /translation="MEHDGQISPSPHAERGLGGEVERGRNPTPIPSPLAGRGKPPPIH
                     NQLARRLTLFDATMIVMGGIIGAGIFTNPYVVAQLVHSTSLILGVWIAGGLIALAGAF
                     IYAELSSQVSETGGQYVYLRDAMHPVVGFVYGWSMLFVIQTGAMAAVALIFANHVFAV
                     AGVTASEWSAALLAASALILLTIVNCVGVRAGTFTQNTFMILKLVAIAALVVIGLALA
                     TPASTEVSAVAPAESIWQTLIAFGAALIPAQFAYGGWQTSCYVAGEVREPRKTLPRAL
                     LIGVVGVIIVYLSVNFVCVYVLGPEMLARTKTPASAIMGLALGDKGARFIAAGIAIST
                     IGFLSQSMLTAPRVYFAMAEDRLFFKRLASLNRSRVPAFAIALQGGLAAAIALVGSRY
                     EQILNYAVSVDVVSFGMTAACVFVFRKRLRADADVFRIPGHPFTTLFFIGACAVITFS
                     MIYKYPRNSAISFGIMFLGVPAYFLWTRNRAVARP"
     gene            complement(2864..>3144)
                     /locus_tag="VIT19_00705"
     CDS             complement(2864..>3144)
                     /locus_tag="VIT19_00705"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY5837520.1"
                     /translation="TELDAARLLVYRAAYLKDAGDERSTREASEAKLFATEAAGRISD
                     QAVQIHGGSGLVRGSVVERLYRDVRALRIYEGTSEIQKLVIANQLLKE"
BASE COUNT          674 a          947 c          884 g          639 t
ORIGIN      
        1 gactccccaa ccaaacgtgt cgtcggggcc gttgcgttcg tagatagtga tgtcgtggtt
       61 ggcgtcggcc tgcttcatga ggatggcgaa gtacatcccc gccggcccgc cgccgataat
      121 gttgattttc atgcgggtac ggacgcttcc agcgtgctct tagttgatcg ccggccgaag
      181 ggtacagcac gcttgaggcg tgcgtaccca aagcccaact gaagttggta ctctaacgcc
      241 gtaaattaga gttctataat tcatccaggg ctttagcgag tctctgcact ccttcgttga
      301 aaagttgagg ttcggcacac atgccgatgc gcaggtgctg cggtgattca aaaaagcggc
      361 cgggcacaaa agctgtttcg tacttgtcgt tcagtagagt ccaaagcgaa tcgacgctcc
      421 ctttctccaa acgtggaaaa caagtcgtgc cgatttcgga tctcggggca gtgagttctt
      481 cgcgcgaatc caggaaatca ttcagcacgg cgcgattgct ttcaagaatg tccttcgcgc
      541 gggtaacgaa cttcggcagc ttcctcattg cgagcgcgct cagcctttcc gccggatggg
      601 gcgccaccgc gccgaagatg tcgtgcagca gacgcattct ttcggcaagc tccggttccg
      661 ccagaatcca gccacagcgg actccatgca gcccgtaacc cttcgtcaaa ctgctggtcg
      721 cgatgaactg cggcccaaga tgaaccgacg agcgcggcgc gttttcgaac attgcttcga
      781 gatacacctc gtcaaccagc acgcgcgcac cgacactctc ggcgatttca ccggtccgtc
      841 tgaccgtttc ttcatcgact aacgcgctgc tcgggttatg cagattcgtc agcacgatta
      901 agcgcgttcg cgaactgact ttcgtttgta attcgtccag atcgacctgg aagttgtttt
      961 cggacgcgcg tgagaaccgt ttgaccttca atccaaagta ttcggcgagc gcgagcagcg
     1021 gctcatacgt cggttgctca atcaagactt catcgccgtg atcgatcgcc gccgccatcg
     1081 cgaggtgatt tgccatcgac gtgccgccgg aaatggtgac tacgctttcg ggctcgacgt
     1141 gacaatgctc ggcaatcgcg tttaccagcg ggctgtagcc gtatgagttg tcgccgttca
     1201 gatcgatgtc atcaatggtt gcttcgagtt cagcgaaggg aagattcaga atcccgctca
     1261 gagccaggtc gtacttcacc ttcggccgct tcttggccca ttgcatgtat gtggattgag
     1321 tgttcattgc aggagcgccc gcatcctgcg ggcagttcgc gggcatcttg cccgctcatt
     1381 tgttacgccc tccctcacgg tcgggctact gcccgattcc tcgtccaaag gaaatacgcc
     1441 ggcacgccga gaaacataat tccaaaactg attgcgctgt tccgcgggta cttatagatc
     1501 atgctgaacg ttatcacggc acacgcgccg atgaagaaaa gcgtcgtgaa cggatgtccg
     1561 ggaatgcgga acacatcagc gtcggcgcga agtcgcttgc ggaacacgaa cacgcaagcc
     1621 gccgtcattc cgaacgagac gacatctacc gacacggcat agttcaaaat ctgttcgtag
     1681 cggctgccaa ccaaagcgat ggccgccgcc aatccgcctt gcagcgcgat cgcaaatgcc
     1741 gggacgcgtg agcgattcag cgacgccaga cgtttgaaga acaaacgatc ttcagccatc
     1801 gcgaaataaa ctcgcggcgc ggtcagcatg ctctggctca aaaacccaat cgtcgaaatt
     1861 gcgatgccgg cggcgatgaa gcgcgcgcct ttgtcgccga gggccagccc catgattgct
     1921 gacgcgggcg tcttcgtcct ggctaacatc tccggcccga gcacatacac gcacacaaaa
     1981 ttcactgaaa ggtaaacgat gatcactccc acgaccccga ttaacagggc gcgcggcagg
     2041 gttttgcgcg gctcgcgtac ttcacccgcg acatagcagg acgtttgcca gccgccgtag
     2101 gcgaactgcg ccgggatcaa agctgcgccg aacgctatca atgtttgcca aatgctttcg
     2161 gcaggcgcga cggcgctgac ttccgtggac gccggagtcg ctaatgccag gccgatgacg
     2221 acgagcgcgg cgatggcgac aagcttcaga atcatgaacg tgttctgcgt aaacgtgccc
     2281 gcgcgcacgc cgacgcagtt cacgatcgtc aaaagaatca gagctgaagc ggccagcaac
     2341 gccgcgctcc actcgctggc cgtcacgccg gcaaccgcaa atacatggtt cgcgaagatc
     2401 agcgcgacgg cggccatcgc gccggtttga atcacgaaca gcatgctcca gccgtaaaca
     2461 aagccgacga ccgggtgcat tgcgtcgcgc agataaacgt actgcccgcc cgtctcggaa
     2521 acctgcgatg aaagctccgc gtaaatgaac gcaccggcca acgcaatcag cccgcccgca
     2581 atccacacgc caagaatcaa agacgtcgaa tgcaccaact gagcgacgac gtaaggatta
     2641 gtgaagatgc ccgcgccgat gattccgccc atgacgatca tcgtggcgtc gaagagagtt
     2701 agccggcgcg cgagctgatt gtggatcgga ggcggtttgc ccctccccgc aagcggggag
     2761 gggatggggg tggggttgcg tccgcgctca acctctcccc ccaaccccct ctccgcgtgc
     2821 ggagaggggg agatttgacc gtcatgctcc attcgattcc ttgttactct ttcaagagtt
     2881 gattggcgat cacgagcttt tgaatctctg aagttccctc gtaaatccgc agcgcgcgca
     2941 cgtcgcgata cagccgctca acgactgatc cgcgcacgag tccgctgccg ccatgaatct
     3001 gcacggcttg atcgctgatg cggccggccg cttcggtggc aaatagtttt gcttcactgg
     3061 cttcacgcgt tgaacgttcg tcgcccgcgt ctttcaagta cgcggcgcga tatacgagca
     3121 gccgagccgc gtcgagttcg gtga
//
LOCUS       DATDBY010000032         2718 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1600703, whole genome shotgun sequence.
ACCESSION   DATDBY010000032 DATDBY010000000
VERSION     DATDBY010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1600703"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(216..419)
                     /gene="rpmI"
                     /locus_tag="VIT19_00710"
     CDS             complement(216..419)
                     /gene="rpmI"
                     /locus_tag="VIT19_00710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006163215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEY5837521.1"
                     /translation="MPKLKTHKGAAKRFRLTATGKIKRGHSHARHILTKKTNKRKRYL
                     DVDVLVSESDQKRVERMLPYGRD"
     gene            complement(471..1334)
                     /locus_tag="VIT19_00715"
     CDS             complement(471..1334)
                     /locus_tag="VIT19_00715"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEY5837522.1"
                     /translation="MRKALQLLALFGVLLAVQLQTTVAQKGDGARLAKEVSAISAGAD
                     TKARGTAIKARLDALGIKYRIEPFMHADRQGENIVVELPAAGATKQLMLGAHYDRVSQ
                     GHGAIDNASGSLAVLELLAALKARPLKNYAVVAAFFDLEEIGLRGSANYIKAREGKPL
                     PNIFINFDVFGYGDTLWTMTPDEKSSSAVAVNSAAAAAKFPLQIGAQYPPSDHLSFIR
                     AKVETLSFSLIDGKEIPFILKVFQGERPEQMPRVMTIIHSPNDTPDKVDGAAIARALL
                     VVEQAIRLMDK"
     gene            complement(1346..2101)
                     /gene="infC"
                     /locus_tag="VIT19_00720"
     CDS             complement(1346..2101)
                     /gene="infC"
                     /locus_tag="VIT19_00720"
                     /inference="COORDINATES: protein motif:HMM:TIGR00168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEY5837523.1"
                     /translation="MATGFRGRGRPDFRRGPVIRINERIRVPQVRVIGEDGEQFGVLD
                     TRDAIRRAREQGMDLVEVAPNAEPPVCKIIDFGKFQYEAKKKANEAKKKQVVITVKEI
                     KFRPGTDVHDYTYRMKRAREWLAEGNKIKATIWFRGREMTHRELGSRILEQLEKDLIE
                     VGDVEMRPRMEGNQMFTIFAPKKHGGGKGGGGSHQSSPARPEPARPERPRSETLASAS
                     EPKPEPKPEPKPEPKTEPKTEPEVEPKVEPTTS"
     gene            complement(2194..>2718)
                     /locus_tag="VIT19_00725"
     CDS             complement(2194..>2718)
                     /locus_tag="VIT19_00725"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF015113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEY5837524.1"
                     /translation="DFKIEDAIGRLWQLGTVQWDFNLPERFELEYIGEDNKPHRPVMV
                     HRALFGSIERFFGVLIEHYAGAFPMWLAPVQVALLPITDRINEYAEKIAQELRGSGLR
                     VEVNVRSDKIGAKIRDAQLQKIPFMLVLGDREMEEAKVAVRERTKGDIGAMALNEFKE
                     MATRLVKTRALTNT"
BASE COUNT          547 a          834 c          647 g          690 t
ORIGIN      
        1 aagcgaagtt cagcccacgc tcaactgatt ctttcgcgga acgataaagc ttcgacttag
       61 tgccgcgata tcctttcgcg agttttaaaa tcttcttgcg ccgttcgagg cgcttatttc
      121 cacgttttgc tcttggcatg acaaccctcc aatgatttgg tcattggctc attgattcat
      181 tgaatcaatg actaaatgac tcgatgaatc aattcctaat ctcgtccata tggcaacatc
      241 cgctcgaccc gtttctgatc actttcagaa accagcacgt cgacgtccag atatcgcttt
      301 cgcttattag tcttcttcgt cagaatgtga cgcgcatgcg aatggccgcg cttgatcttg
      361 cctgtggccg tcaagcgaaa gcgcttcgcc gcgcctttgt gtgttttcag ttttggcata
      421 aatgctcctc cttaaatctc ggatctcaaa tttgagatct caaacaaact tcacttgtcc
      481 attaatcgaa tcgcctgttc gactaccagt aaagcacgcg cgatcgccgc gccatcaacc
      541 ttgtccggtg tgtcgttggg gctgtgtatg atcgtcatca cgcgtggcat ttgctccggc
      601 ctctcgcctt gaaagacctt gagtatgaat ggaatctctt ttccatcgat cagactaaac
      661 gagagcgttt ccaccttcgc cctaataaaa ctcaggtgat cactcggcgg atactgcgca
      721 ccgatttgca ggggaaactt cgctgctgcg gcggctgaat tcaccgccac agccgacgaa
      781 gatttttcat ccggcgtcat cgtccaaagc gtgtcgccat acccgaagac atcgaagttg
      841 atgaaaatgt tcggcagagg ttttccctct cgcgccttga tgtaattcgc cgatccgcgc
      901 aggccaatct cttccaggtc aaagaatgct gcgaccacgg catagttctt taacggtctg
      961 gctttcagcg ccgccaacaa ctccagcacc gccagcgacc cggaagcatt atcaattgcg
     1021 ccgtggccct ggctaacgcg atcatagtgc gcgcccaaca tcagctgctt cgtcgctccc
     1081 gccgcaggca gctcaaccac gatattttcg ccctgccggt ctgcgtgcat gaacggctca
     1141 atgcggtact tgatgcccag cgcatccaat ctcgccttga tcgccgtccc ccgagctttg
     1201 gtatcggctc cggccgaaat ggctgaaacc tctttcgcca gccgggcgcc gtcgcccttc
     1261 tgcgccacag tcgtttgcaa ctgaacggcg agcagaacgc caaacagcgc caataattga
     1321 agtgctttgc gcataaagtt tctcgtcagg acgtcgtcgg ttcaaccttc ggctcaacct
     1381 ccggttcagt ctttggttca gtctttggtt caggcttcgg ttcaggcttc ggttcaggct
     1441 tcggttcgct cgcggacgcc aatgtttcgg accgtggcct ctcgggccgc gctggttccg
     1501 gtcgtgcggg gctgctttga tgagagcctc cgccgccttt gccgccgcca tgtttcttcg
     1561 gcgcaaagat cgtaaacatc tggttacctt ccatgcgcgg gcgcatctcg acgtcgccaa
     1621 cctcgattaa atctttctcg agttgctcca aaattcgcga acccaattcg cggtgcgtca
     1681 tctcgcgtcc gcgaaaccag atcgtcgcct tgatcttgtt gccttccgcc aaccattccc
     1741 gcgcgcgctt catgcgatag gtgtagtcgt gcacgtcggt gccggggcga aacttaattt
     1801 ccttgacggt gatgacgacc tgtttcttct ttgcctcgtt cgccttcttc ttcgcttcgt
     1861 actgaaactt tccgaagtcg atgattttgc aaacgggcgg ttcggcgttg ggcgcaacct
     1921 caaccagatc catgccctgc tcccgcgcgc gacgaattgc atcgcgcgtg tccagcacgc
     1981 caaattgttc gccatcttca ccgatcacgc gcacttgcgg cacgcgaatc cgttcgttaa
     2041 ttctaattac cggcccacgg cggaagtccg ggcgaccgcg gcctcgaaaa cctgtagcta
     2101 tgtgtgcacc tcctctaagt taggtttcca gttccaagtt tcaagtttca agttctgaaa
     2161 gcgaacttta gacctgaaac ttgaaacctg aaactacgtg tttgtcagcg ctcgcgtctt
     2221 tactaaacgc gtcgccatct ctttgaattc attcagcgcc attgcgccga tgtcgccttt
     2281 agttcgctca cgaacggcga cctttgcctc ttccatctct cgatcaccga gcacgagcat
     2341 gaaaggaatc ttctgcaact gcgcgtcgcg aattttcgcg ccaatcttgt cgctgcgcac
     2401 gttcacttcg acgcgcaggc ccgagccgcg cagttcctgc gcgatcttct cggcatattc
     2461 gttgatccga tcagtaatcg gcaacagcgc tacctgcacc ggcgccagcc acatcggaaa
     2521 cgcgcccgcg taatgctcga tcaagacgcc aaagaagcgt tcgatcgatc caaacagagc
     2581 gcgatgcacc atcaccggcc ggtgcggttt attgtcttcg ccaatgtact ccaactcgaa
     2641 acgctccggc agattgaagt cccattgaac cgtgccgagc tgccaaagcc ggccaatcgc
     2701 atcctcgatc ttgaaatc
//
LOCUS       DATDBY010000033         4682 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1167897, whole genome shotgun sequence.
ACCESSION   DATDBY010000033 DATDBY010000000
VERSION     DATDBY010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4682
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1167897"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1437
                     /gene="recJ"
                     /locus_tag="VIT19_00730"
     CDS             <1..1437
                     /gene="recJ"
                     /locus_tag="VIT19_00730"
                     /inference="COORDINATES: protein motif:HMM:TIGR00644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEY5837525.1"
                     /translation="AVLLRALRMLGATCGYHVPHRFTEGYGIQQPALEKAASEGYKLV
                     VSVDCGIRAHEPLIWARQNGLDVIITDHHLPDEDEGAPPAFAVLNPNQHGCNYPDKNL
                     AGVGVAFKLVHALFRERGRESVVPGFLKMVAIGTVADVAKLVGENRAIVALGLSDLPK
                     AVNCGLRALIDIAGCGDGAEVNAYDLGFRIGPRINAAGRMDAASAVVDLFNATDQEEA
                     RRLAEHLDTRNRERMEMQREIFNRAVEEFETGTERASQTHVAVIAGDGWHRGVIGLAA
                     SKIAERLNRPCVVISFEDDMGHGSARSIEAYHLFNGLTACSDLFEKFGGHSHAAGLSI
                     RRECVAEFRRRLNEHAASCLTEDDLTPAITLDAEVGANDLTFALSQDLRQMEPFGAGN
                     PRPVFMTRGLRVLGDPKVIKEQHLKFRVAGENNRPLEAIWWRGLEESTATPQPGQRID
                     LAYEFEAQTWMGDIRLQLNVRDMKSSES"
     gene            1504..3816
                     /gene="lptC"
                     /locus_tag="VIT19_00735"
     CDS             1504..3816
                     /gene="lptC"
                     /locus_tag="VIT19_00735"
                     /inference="COORDINATES: protein motif:HMM:TIGR04409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEY5837526.1"
                     /translation="MEVARKRRISAVDLRARVPAIARALALFLLIAGSIFVGVSYYKM
                     RNNTPFRLRSEAPALSKEITSIINGYERRMTKDNRLYLWLRAARDVTYADGHHELEQV
                     NLQVFPANSPKPDQITADRALYDQENGLLQFNGNVQIETHEALKVKTDSLLYYQDKEM
                     GETSSAITFERENISGKSTGAVVDDKNKRLELKNDVEITVAPETANNANLKGARGKPV
                     TIRSKQAVFEQASLRLTFSGGATAEQEQDIMSGETLTANLNAQKKLQKLEMRGNSYLR
                     SMTEGHAAEARAIDIDFYLDANQQLQRAYAVRDIRAQTLNADSDVQLSGANILDINFQ
                     VQGDRSVIKEMKSEGRSVVNLSAPKTRANDPRAASKRLTADSIKLLWRLKGKDLEKAE
                     AAGNAELYVEPAQKTATADAKTLTATRFDCDFFEVGNITRNCVATGGSKAVIQPFQPS
                     DKRGTRTITSQKMNADFVRETQDIEKVDASGESKFNELDRNGTADAASYTAADETIRL
                     RGGEPTVWDSRARTKAAEIDSNNSTRVSYCRGKVQTTYYSQEQTNGAAPFRKVKSPVY
                     LLADRAELNHDSGNATYTGNGRMWQDDNFVRGDVINLYREQKQMDARGHVQTALYQAK
                     QKTGSSINVVPVFVTSEYMRYSDAERVVHYETNVDIKQGTDRMTAGVADVYLQKEVNE
                     LEKVIAQRNVVLIQPGKRGTGDWCQYTAVDEVAVLKGNPAHVEDAEQGSTDGNRLTMY
                     RRENRVVVDDPGGSQSPGRVRSTHPIKKSP"
     gene            3867..>4682
                     /gene="trpB"
                     /locus_tag="VIT19_00740"
     CDS             3867..>4682
                     /gene="trpB"
                     /locus_tag="VIT19_00740"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEY5837527.1"
                     /translation="MPRSKQPATVTSGTKPDSLGHWGPYGGRFVPETLMAPLEELTAA
                     YESARADQTFQNDLNALLCDYAGRPTPLFFARRLTELSGGASIYLKREDLLHTGAHKI
                     NNTLGQVLLARRMGKRRIIAETGAGQHGVATATVCALFGLNCSVYMGAEDMRRQAVNV
                     FRMQMLGAEVREVNIGSRTLKDAINEALRDWVTNVEDSYYLLGSALGPHPYPLMVRDF
                     QSVIGRETREQILEKTGRLPKYLIACVGGGSNSIGLFHPFLNDESVRMIGVEAG"
BASE COUNT         1079 a         1263 c         1413 g          927 t
ORIGIN      
        1 gcggtgttac tgcgcgcttt gcggatgctc ggcgcgacgt gcggctatca cgtgccgcat
       61 cgctttaccg aaggttatgg cattcaacaa cccgcgttgg agaaggcggc gagcgaagga
      121 tacaagctgg tggtcagcgt cgactgtggc attcgcgcgc acgaaccact gatttgggcg
      181 cgccagaatg gcctcgacgt catcatcacc gatcatcatc tgccggacga agacgaaggc
      241 gcgccgcccg cgttcgcggt gctgaaccct aatcagcacg gctgtaatta tccggacaag
      301 aacctggccg gcgttggcgt cgctttcaag ctggtgcacg cgttgtttcg cgagcgcggt
      361 cgcgaatcag ttgtgccggg cttcctgaag atggtcgcga tcggcacggt tgccgacgtc
      421 gctaaactcg tcggcgagaa tcgcgcgatt gtggcgcttg gtctttcaga tttgccgaag
      481 gcggtgaact gcggcttgcg cgcgctgatc gacattgccg gttgcggcga tggcgcagaa
      541 gtgaacgcgt acgaccttgg ctttcgcatc ggcccacgca taaacgctgc cggtcgcatg
      601 gacgcggcga gcgccgtcgt cgatctgttc aatgcaacag atcaagagga ggcgcgccgt
      661 ttggctgaac atctcgacac gcgcaatcgc gagcgaatgg agatgcagcg cgagattttc
      721 aatcgcgcgg tggaagagtt tgaaaccggt accgagcgcg catcgcagac gcacgtggca
      781 gtgattgccg gtgacgggtg gcatcgcggc gtcatcggtc tggcggcgtc aaaaattgcc
      841 gagcgattga atcgcccctg cgtcgttatt tcgttcgagg atgacatggg ccacggatcg
      901 gcgcgcagca tcgaggccta ccacctgttc aatggcctga cggcttgcag tgacttattt
      961 gagaaattcg gcgggcattc gcacgcggcc gggctttcga ttcgtcgcga atgtgtggcg
     1021 gaatttcggc gtcgcttgaa tgaacatgcg gcgtcgtgtt tgactgaaga tgacttgacg
     1081 cctgcgatca cccttgatgc ggaagtaggc gcgaacgatt tgacgttcgc tctgtcgcag
     1141 gatttgcgcc agatggagcc gtttggcgcc ggcaatccgc gcccggtttt catgacgcgc
     1201 gggctgcgcg tccttggcga tccaaaggta ataaaggagc agcatctgaa attccgcgtc
     1261 gccggcgaga acaatcggcc cctggaagca atctggtggc gaggtctgga agaatcgaca
     1321 gcaacgccac agcccggtca gcgcatcgat cttgcatacg agttcgaggc gcagacgtgg
     1381 atgggcgata tccgattgca attgaacgtt agggacatga aaagcagtga atcgtaaatg
     1441 gtaaatcgta aatagaccgc gacatgaaac acctatccac gatttacgat taacgattta
     1501 ctaatggaag tagcccgcaa aagacgaatc agtgccgttg acctgcgtgc gcgcgtgccg
     1561 gccatcgctc gcgcgctggc gctgtttctg ttaatcgcgg ggtcaatttt cgtcggcgtg
     1621 tcttactaca agatgcgcaa caacaccccg tttcgcttgc gatcggaagc tcccgccctc
     1681 tcgaaagaaa tcacgagcat catcaacggt tacgagcggc gcatgaccaa agacaaccgg
     1741 ctctatcttt ggctgcgggc ggcgcgcgac gtgacctacg ccgatggcca tcatgaactg
     1801 gagcaggtca atctgcaggt ctttcccgcg aacagcccca agcctgatca aatcaccgct
     1861 gaccgagcgc tctacgatca agagaacgga ttgctgcaat tcaacggcaa cgttcagatt
     1921 gaaacgcacg aggctttgaa ggtgaagacg gattcgttgc tctactatca ggacaaagag
     1981 atgggcgaga cgtcttcggc gattactttc gagcgcgaaa atatttccgg taaatccacg
     2041 ggcgccgtcg tcgacgataa gaacaaacga ctcgaattga agaacgatgt cgagatcacg
     2101 gtcgcaccgg aaactgccaa caatgcgaat ttaaaaggcg cgcgcggaaa gccggtgaca
     2161 atccgctcaa agcaagccgt tttcgagcag gcttcattgc gtctgacttt ctcgggcggc
     2221 gccacggcgg aacaggaaca ggacatcatg agcggcgaga cgttgaccgc gaatctcaac
     2281 gctcagaaaa agcttcagaa gctcgagatg cgcggcaact cgtacttgcg ttcgatgact
     2341 gaaggacacg ctgcggaagc tcgcgcaatc gacatcgatt tttatctgga cgcgaatcag
     2401 caattgcagc gcgcttacgc agttcgcgat attcgcgcgc aaacgctgaa cgcggattcg
     2461 gatgtgcagc tttccggcgc gaacattttg gacatcaact ttcaggtgca gggtgaccgc
     2521 agcgtcataa aagagatgaa gagcgaggga cgctcagtcg tgaatctatc ggcgccgaag
     2581 acgcgcgcaa acgatccgcg ggcggcgagt aagcgtttga ccgcggactc gatcaaattg
     2641 ctctggcgcc tgaaaggcaa agacctggaa aaggccgaag cggccggcaa tgccgagctg
     2701 tacgtcgagc cggcgcaaaa aaccgcgacc gccgacgcga aaactttgac ggcgactcgg
     2761 ttcgattgtg atttctttga ggttggcaac attacgcgaa actgcgtcgc gacgggcgga
     2821 tcgaaagctg tcatccagcc gtttcaaccc agcgacaaac gaggcacgag aactatcacg
     2881 tcgcaaaaaa tgaatgctga cttcgtccgc gaaacacagg acatcgagaa ggtcgatgcc
     2941 agcggcgagt caaagtttaa tgaattggat cgcaacggaa ctgccgacgc cgcctcgtac
     3001 accgcggccg atgaaactat ccgtttgcgc ggcggcgaac ccacggtttg ggactcgcgg
     3061 gcgcgcacga aagctgccga gatcgattcg aataactcaa cccgcgtctc ttattgtcgc
     3121 ggaaaagttc agacgaccta ctacagccag gaacaaacaa acggcgccgc gcccttccgc
     3181 aaggtaaaga gtcccgtgta cctgctcgcc gatcgcgctg agctgaatca tgattccggc
     3241 aacgcgacat acaccggcaa cgggcggatg tggcaggacg ataacttcgt ccgcggcgac
     3301 gtcatcaatc tgtatcgcga acaaaagcaa atggatgcgc gcggacatgt ccaaacggcg
     3361 ctctatcagg caaagcaaaa aacgggcagc agcatcaatg tggtgccggt gttcgtgacg
     3421 tcagagtaca tgcgttactc ggatgccgag cgggtggtgc actacgaaac caacgtcgat
     3481 attaagcagg gaactgatcg catgacggct ggggtggccg acgtttatct gcaaaaagaa
     3541 gttaacgaac ttgagaaggt aatcgcgcaa cgcaacgtcg tgctgattca acccggcaag
     3601 cgcgggaccg gcgattggtg tcaatacacg gccgttgatg aagttgcggt tttgaaaggc
     3661 aatccggccc acgtcgaaga tgccgaacag ggctcaaccg acggcaatcg cttgacgatg
     3721 tatcggcgcg agaatcgcgt cgtcgtcgac gacccgggtg gctcgcaatc gccggggcgt
     3781 gtgcgctcga cgcatccgat taagaagagt ccttgaccac cacaaaaatc gtttagaggc
     3841 gggcgttgcc cgccaaatgt ggggcggtgc cccgctctaa acaacctgcg actgtgacat
     3901 ccggaactaa acctgactcg ctcggccact ggggtcccta cggcggtcgg ttcgtgcctg
     3961 agacgctgat ggcgccgctc gaagaactaa cggcggccta tgaatcagcg cgcgctgatc
     4021 agacttttca aaacgatctc aacgcgctgt tgtgcgacta cgccgggcgg ccgactccgc
     4081 ttttcttcgc gcgacgatta actgagcttt ccggcggcgc gagtatttat ctcaagcgcg
     4141 aagatcttct tcacaccggc gcgcacaaga tcaacaacac gctgggccag gttctgttgg
     4201 ctcggcgcat gggcaaacga cgcatcatcg cggagaccgg tgcgggccag catggcgtgg
     4261 cgactgcaac tgtgtgcgcg ctctttggtt tgaattgcag tgtctatatg ggggccgaag
     4321 acatgcggcg tcaggcggtg aatgtctttc ggatgcaaat gcttggcgcc gaagtgcgcg
     4381 aggttaacat tgggtcgcgc actttgaaag acgcaattaa cgaggctctg cgcgattggg
     4441 tgacgaacgt tgaggatagt tattatctgc ttgggagcgc cttggggccc catccatatc
     4501 ctttgatggt gcgcgatttt caaagtgtca tcggacggga aacgcgcgaa cagattctcg
     4561 aaaagaccgg gagactcccg aaatatctga tcgcttgtgt cggtggcgga tcgaattcaa
     4621 tcggcctgtt ccatccgttt ctcaatgatg aatccgtacg catgattggt gtcgaagcgg
     4681 gc
//
LOCUS       DATDBY010000034         2042 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_356828, whole genome shotgun sequence.
ACCESSION   DATDBY010000034 DATDBY010000000
VERSION     DATDBY010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356828"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..303
                     /locus_tag="VIT19_00745"
     CDS             <1..303
                     /locus_tag="VIT19_00745"
                     /inference="COORDINATES: protein motif:HMM:NF024748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY5837528.1"
                     /translation="VNPARSAQMMELLKRDYGAPTKDQDDQGHGFTGIALKDVVGAKL
                     WSKAGWTSTTRHDTAYIELPGGAKFVLTVFTEGHANEREIIPTVARVVIDGINSVH"
     gene            316..681
                     /locus_tag="VIT19_00750"
     CDS             316..681
                     /locus_tag="VIT19_00750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837529.1"
                     /translation="MRLLVSIVFLSYFPVLFASFLLFDQIVKQEYHHHRKDWLADGQP
                     HGFFWVPHESTFARGWLIRIGSWAAFRRLSRILLFATPQWLKQDRKARKLLFAWRTLI
                     FGWLLILFLTFALMFYLSR"
     gene            722..1600
                     /locus_tag="VIT19_00755"
     CDS             722..1600
                     /locus_tag="VIT19_00755"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEY5837530.1"
                     /translation="MYEDLSTHHRAVTTLFRQPHSRDEWNKFRLTDDQIQFFHTNGYL
                     AGIRALNDEQIEALRSELTKLIDPGHPGHRLFYEFNSNESTDPSTVLFHALGAWRLSP
                     GFHDLLWNPAILMPASQLIDGAVRFWHDQLFCKPAAHGGVVAWHQDYSYWTRTQPMAH
                     LSCWIGLDDSTVENGCVHYVPGSHLWNLLPVTGLANDMNAIQSVLSAEQKSQFKPVAI
                     ELKAGECSFHHPLMVHGSFENRSDRPRRGAVINVLRDGVRSASDDSLLAGVPPIPSGE
                     KIQGQFFPLLFDPASF"
     gene            1659..>2042
                     /locus_tag="VIT19_00760"
     CDS             1659..>2042
                     /locus_tag="VIT19_00760"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEY5837531.1"
                     /translation="MRTNASRGERDNFAKPNINVTPLIDVLLVMLIIFMVVSPLKPAR
                     FLTKTASKPDETPVDASPLGLVVTINRDGTLMLNRTANMGSVFDTAKLSAALRDVFEE
                     RLRNRAFRSESRDRIDLPDNDRIEKT"
BASE COUNT          441 a          572 c          551 g          478 t
ORIGIN      
        1 gtcaacccgg cccgcagcgc acagatgatg gaactcctga agcgcgatta cggggccccg
       61 acgaaagacc aggatgatca agggcacgga ttcaccggca ttgctttgaa ggacgtcgtt
      121 ggggcgaaac tctggtcaaa agcaggctgg acgagcacga ctcgtcacga taccgcttac
      181 atcgagttgc ccggcggcgc aaagttcgtg ctgacggtat tcaccgaagg tcacgcaaac
      241 gaacgcgaga ttatcccgac cgtggcgcgc gtagtgatcg atggtatcaa cagcgtgcac
      301 tagttcttcc ggtcaatgag actactagtt agcatcgttt tcctttcgta ctttccagtg
      361 ctcttcgctt ccttcttgct gtttgaccaa attgtgaagc aggagtatca ccaccatcgc
      421 aaagattggc tggcggacgg tcaacctcac ggcttctttt gggttcccca cgaatcgact
      481 ttcgcacgtg gctggcttat cagaatcgga agttgggcgg catttcgtcg actgtcacgc
      541 attttgttat ttgctacacc gcaatggcta aagcaagatc gcaaagcacg caagctgcta
      601 tttgcgtggc gtacgttaat tttcggttgg ttgttgattc tcttcctaac tttcgcactg
      661 atgttctatc tgtcgcgctg atttgtggca acgcgacgct gacagccgat ccgtcaagcg
      721 catgtacgag gacctctcaa cacatcatcg ggccgtgacg acgctgttcc gccagccaca
      781 ctcaagggat gaatggaata aattccgcct cactgacgat caaattcagt tctttcacac
      841 aaacggctat ctcgcgggca tccgcgccct caacgacgaa cagatcgaag cgctgcggag
      901 cgaactaaca aagctgatcg atccgggcca tccgggccat cgtctcttct acgaatttaa
      961 ttcaaacgaa tcgacggatc cttcgacggt gctttttcac gctttgggtg cgtggcgact
     1021 ctcgcccggc tttcacgatc tgctttggaa cccggcgatc ctgatgcctg cgtcgcagct
     1081 catcgacggc gcagtcagat tttggcacga ccagcttttc tgcaagcccg ccgctcatgg
     1141 cggcgtggtc gcgtggcatc aggactactc gtattggacg aggactcagc cgatggcgca
     1201 cttgtcgtgc tggattgggc tcgacgattc aactgttgag aacggctgtg ttcattacgt
     1261 ccccggcagt catctctgga atcttttgcc cgtcaccggc ctggcgaacg acatgaacgc
     1321 gattcagtcc gtgttgagtg ccgagcagaa gtcgcaattc aagccggtcg caattgagct
     1381 gaaggctgga gaatgttctt ttcatcatcc actgatggtg cacggctcgt tcgagaatcg
     1441 cagcgaccgc ccgcgccgag gtgcggttat caacgtgctt cgggatggtg tgcgttcagc
     1501 ttccgacgat tctctgctcg caggcgtgcc gccaattccg tccggcgaaa agatccaagg
     1561 gcaattcttt ccgctgctat ttgatcccgc gtcattctaa gaacgggaac cttgccgtcg
     1621 tccgcgtgtc taattcgcaa gacaggagga cacaccgaat gcgaacgaac gcctcaagag
     1681 gcgagaggga taactttgcc aaacccaaca tcaatgtcac accgctaatc gatgtactgc
     1741 tggtgatgct gatcatcttc atggtggtat cgccgttaaa gcctgcacgg tttttaacga
     1801 agacggcttc aaagcctgac gaaacgcccg tcgatgcgtc gcctctggga ctggtggtga
     1861 cgattaaccg tgacgggacg ctcatgctca accgcacggc gaacatgggt tcagtttttg
     1921 acaccgcgaa gctgagtgcg gcgctccgcg atgttttcga agagcggctg cgcaatcgcg
     1981 ctttccgttc cgaatcgcgc gaccgaattg atttgcccga caacgatcgc atagaaaaga
     2041 cc
//
LOCUS       DATDBY010000035         2323 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1371197, whole genome shotgun sequence.
ACCESSION   DATDBY010000035 DATDBY010000000
VERSION     DATDBY010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2323
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1371197"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..901)
                     /locus_tag="VIT19_00765"
     CDS             complement(<1..901)
                     /locus_tag="VIT19_00765"
                     /inference="COORDINATES: protein motif:HMM:NF017393.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease"
                     /protein_id="HEY5837532.1"
                     /translation="MNRKIMSVVLTGFVLAVVCGSTALTRNNATANMGTAALAKNPRD
                     RCATRHIDETTATQYEQALNKFNSKRSPGQIRKSGAVTIPVYFHVVNKGSGLENGDVP
                     DKWLRDQVSVLNAAYAGADPAAVSTSANTPFRFAMAGVDRVTNEEWFNSAIGSEEERE
                     MKTALHVPGANVLNFYVNNAGGVYLGWATFPFWYAGDPTQDGVVVLYDSLPGGGCCAP
                     RAYNQGDTGTHEVGHWLGLFHTFQGGCAANFNDFVADTPSERSPAFGCPFGRDTCPKP
                     GLDPIENFMDYSEDPCMYQFTGGQ"
     gene            1110..1607
                     /locus_tag="VIT19_00770"
     CDS             1110..1607
                     /locus_tag="VIT19_00770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837533.1"
                     /translation="MKTKIVLLVGLFCVFSSMAVAQRTTAPEVVVRNLYTAQKKDATD
                     PFFQAKSRARLDKFFAKELADLIWNDAVSSARTNEVGQLGGDPLYNAQDMKITGFRIK
                     RPMVGEGNLDLVDVPVTFKNFGKEQTILFRLERDKRRAWKITEIFYPDNEDSASSLSK
                     ILSAP"
     gene            complement(1771..2256)
                     /locus_tag="VIT19_00775"
     CDS             complement(1771..2256)
                     /locus_tag="VIT19_00775"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEY5837534.1"
                     /translation="MGIFDKMFGSGAGEAQQQPNSEQRFNTLKQKYQSVLNAADQEKL
                     QFQNLHVQDDKLYIRATAPSEDVKNKIWDQIKLANPTMDDITADISVDAKAMGAAAGG
                     GLGSGGSSYTVKSGDTLSKISKEFYGDANEYMRIYYANRDQLRDPDKIQIGQQLNIPA
                     K"
BASE COUNT          520 a          650 c          609 g          544 t
ORIGIN      
        1 actgcccgcc ggtgaactga tacatgcacg ggtcttcgct gtagtccatg aagttctcga
       61 tcggatcgag accgggtttc ggacaggtat cgcgcccaaa tggacatccg aatgccggtg
      121 aacgctcgga cggcgtgtca gcgacaaagt cgttaaagtt cgccgcgcag ccaccctgga
      181 acgtgtggaa cagtccgagc cagtgaccga cttcatgcgt gccggtgtca ccctggttgt
      241 atgcgcgcgg tgcgcagcag ccgccgccag gcaggctgtc atatagaacc acgacgccgt
      301 cttgagtcgg atcgcccgcg taccagaacg ggaacgtcgc ccaaccgaga taaacaccgc
      361 cggcgttgtt cacataaaaa ttcagaacgt tagcgccggg gacgtgcaac gcggttttca
      421 tctcgcgttc ttcttccgag ccaatcgctg agttgaacca ttcttcgttc gtcacgcgat
      481 cgacacccgc catcgcaaag cggaatggcg tgttcgccga ggtcgaaaca gcggccggat
      541 cggccccggc atacgcggcg tttagcacgc tgacttgatc gcgcaaccat ttatcaggca
      601 cgtcgccatt ttcgaggccg ctgcctttat taacgacgtg aaagtaaacc ggaatggtga
      661 ctgctccgga cttgcgaatc tgccccggcg agcgtttcga attaaacttg ttcagcgcct
      721 gttcatattg cgtcgctgtc gtttcatcaa tgtgtcgcgt ggcgcagcgg tcgcgaggat
      781 ttttcgctaa agccgcggta cccatgttcg cggtcgcgtt attacgcgtt agcgctgtcg
      841 aaccgcacac tactgccaac acgaagccgg tcaacacaac cgacatgatc tttctattca
      901 tgtataagcc ctcctgggtc taaagcgtga cgttaaagcc gagccggtga tcgggacagc
      961 accggcgagt gtctaagaga ggctgaaact ttatggcagg catctgatgc tgtcaacggt
     1021 tgccgatcga gggccaactt gactcgcgcg agacgcaaag ttagattgcg gctgtacttc
     1081 taatccgctc tccgaaatac tttaaaccca tgaaaacgaa aattgttcta ctggtaggcc
     1141 tcttctgtgt atttagctcg atggccgtgg cccagcgcac taccgcgccc gaagtcgtcg
     1201 tgagaaacct ctacacggcg caaaagaagg acgcgacaga tccgttcttt caagcgaaga
     1261 gccgcgcccg tctggataag ttcttcgcga aagaattggc cgatttgatt tggaatgatg
     1321 cggtttcgtc ggcgcgaacc aatgaagtgg gccagctcgg cggcgatccg ctttacaacg
     1381 cgcaggacat gaaaatcacc ggcttcagaa ttaagcgacc aatggtcggt gaaggcaacc
     1441 tcgatctcgt cgatgtgccg gtgacgttca agaacttcgg caaagagcag acgatcctgt
     1501 ttcgcctgga gcgagacaag cgccgggcat ggaaaatcac agagatcttc tatcccgaca
     1561 acgaagactc cgcctcatcg ctcagcaaga tcctgtccgc gccctagtgg tgaccattaa
     1621 gtctaaggtc ttcctcagtg tctctgtgga actttgtgtc tctgtggtga aattatcgct
     1681 ggaaacattc accacagagg cactgaggag acacagagac acagagtgat aacaaatgga
     1741 cgctgctcag ctatttagct gtccgccaaa ctacttcgcc ggaatattca attgctggcc
     1801 gatttgaatc ttgtccggat cgcgcagctg gtcgcgattc gcataataga tccgcatgta
     1861 ctcgttcgcg tcgccgtaaa actctttgct tatcttcgac agagtgtcac cagatttgac
     1921 cgtgtaactg gacccgccac tgcctaagcc gccgccggcc gccgcgccca tcgctttagc
     1981 gtccaccgaa atgtccgccg tgatgtcgtc cattgtcgga ttagccagct tgatctgatc
     2041 ccagatcttg ttcttaacat cctcagacgg cgccgtggcg cgaatgtaca gtttgtcatc
     2101 ctgcacatgc agattctgaa actgcagctt ttcctgatcc gcagcattca gcactgattg
     2161 atatttctgt tttagcgtat taaagcgctg ctcactgttc ggttgttgtt gagcctctcc
     2221 tgccccactt ccgaacatct tgtcaaaaat ccccatgatc aaagtacctc cctaaagttt
     2281 cgttatgtga ggagcaatgc ttatgccgtt gagtatcggt tgg
//
LOCUS       DATDBY010000036         2751 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_351236, whole genome shotgun sequence.
ACCESSION   DATDBY010000036 DATDBY010000000
VERSION     DATDBY010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351236"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1235)
                     /locus_tag="VIT19_00780"
     CDS             complement(<1..1235)
                     /locus_tag="VIT19_00780"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY5837535.1"
                     /translation="MRKLFAATLLGVISLSIVIAQPNQSASRGVQTPPNLERFITDLH
                     KGFYPEQIAPGAVVVVVKDSRVILVKGFGYADLEAKRPVTPQTVFYTASSSKPYLALT
                     AALLDHKGTLDLDAPLSRLLPNLKLQAPLSPDSIKLRDLLTHTHGISGGPVDFRLTLT
                     GHGTTSQHVEALAQHPASRSGKDFAYSNIGYQIAGLAFDTSLKQNWKNLVQQTVITPL
                     GMKGTTPYLSRANREQLAMPYEATTTGYKRLHYAKADSNMHAAGGLVTTGEDQAKWLI
                     MNINRGRVGRAQIFPAAVIAETHRRQVDQDTPFSWVRRYEYGLGWNIGSYEGEKLIHA
                     HGAFSAFYAHVSFMPEHRLGVAVLTHESLLGDQFAENVAQYVYDSFLKTPGAKYRWEK
                     RLAAAPQTGKRYRDGLAAE"
     gene            complement(1355..2194)
                     /locus_tag="VIT19_00785"
     CDS             complement(1355..2194)
                     /locus_tag="VIT19_00785"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEY5837536.1"
                     /translation="MTRQSASRQTFTTRSSRRSAAFAGNVRVIEHVYSPGDRQDKHAH
                     SYASISVVLAGSLSESVGNNVEDAFPLSVVVKPGDTEHADRFGTVGARMFSVQFEPPI
                     IQSLIDGDLKLNRWQWIHGGALARWMLTLLQTYRRTALPNEELEDTVYEVLASLPTAK
                     TVRASSPPRWLERVRQELDETFSAGVRVCDLAAQANVHPVYLARVFRRYVGCSITDYR
                     TLLKARAAAELLASSGVTLATAAHDCGFADQSHMGRSFKSVTGLTPRDYRTIVNGPYR
                     RAA"
     gene            complement(2274..>2751)
                     /locus_tag="VIT19_00790"
     CDS             complement(2274..>2751)
                     /locus_tag="VIT19_00790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837537.1"
                     /translation="ESEQAVADEQLRIAGVQNQMKGAETQISQTLLEMEGEKDIARLR
                     LKPKGGLIQTTSFIRYTGAGSWAISQAGKLEMFFQQTFKRPLPIAVFGQGAIHNRWHL
                     DHRNAMDVSLHPDGAEGQALIDFMRRNGIPFSAFRGAIPGVATGPHIHIGRPSSRY"
BASE COUNT          582 a          753 c          793 g          623 t
ORIGIN      
        1 tattccgccg ccaggccgtc acggtacctc tttcccgtct gcggtgcggc ggcaagtctt
       61 ttctcccacc ggtattttgc gccgggtgtt ttcagaaaac tgtcatagac gtactgcgcc
      121 acgttttccg cgaactggtc accgagcaat gactcgtgcg ttaagaccgc gacaccgagc
      181 cgatgttccg gcatgaacga aacgtgcgca tagaaggctg agaatgctcc gtgtgcgtga
      241 atcaactttt cgccttcata cgatccgatg ttccaaccga gcccatattc gtaccggcgc
      301 acccacgaga acggcgtgtc ctgatcaact tgccggcgat gagtctcggc aattacggcg
      361 gcgggaaaaa tctgcgcccg tccgactcgg ccgcgattga tattcatgat cagccacttc
      421 gcctggtctt caccggtggt caccaggcct ccggcggcgt gcatgtttga gtcggccttc
      481 gcgtaatgga gtcgcttata acccgtcgtg gttgcttcgt aaggcatcgc gagctgttcg
      541 cgattcgcgc gcgaaaggta tggtgtcgtg cctttcattc ccagaggggt gatgaccgtt
      601 tgctgaacga gattcttcca gttttgctta agcgaagtat caaaagccaa acccgctatt
      661 tgataaccga tgttgctgta agcgaaatct tttccggacc ttgacgccgg atgctgggcc
      721 agcgcctcca cgtgttgtga cgtcgtgcca tggccggtca aggtcagtct gaaatcgacg
      781 ggtccgccag agattccgtg agtatgagtt aacaggtcgc gcaacttgat cgagtcaggt
      841 gagagcgggg cttgtagctt caagtttggg agcaaccggc tcaagggcgc gtcgagatcc
      901 aacgtgccct tgtgatcaag caatgcagcg gtcagcgcca ggtacggttt tgatgaagac
      961 gcggtgtaga agacagtctg cggcgtgacc gggcgtttag cctccagatc ggcgtaacca
     1021 aaacccttca ccaggattac gcgcgagtct ttgacgacca cgacgaccgc accgggagca
     1081 atctgttcgg ggtagaagcc cttgtgcaga tcggtgatga acctctcgag gttgggcggc
     1141 gtttgaacgc ctcgggaagc agattgattc ggttgggcga taactatgct cagcgagatc
     1201 acgcccagga gtgttgccgc aaatagtttt ctcacattaa gtactcccga tttcgacgaa
     1261 gagaggtccg tcccttaatg ctgagcagga taccgcgggc ggcgcaggtc gatatagaac
     1321 agttgaaacc agcgatcggc gagtagaaaa acctttaagc ggctcgccga taagggccgt
     1381 taacgatggt tcggtaatcc cgcggggtca aaccggtgac tgacttgaaa gagcgaccca
     1441 tgtgactttg atcggcgaat ccacagtcgt gagcggcagt cgccagcgtt acgccggacg
     1501 atgcgagaag ctccgcggcc gcgcgtgctt tcaggagcgt ccggtaatca gtaattgaac
     1561 aaccgacata gcgccggaac acgcgagcta gataaacagg gtgaacattg gcctgcgcgg
     1621 caaggtcgca aacgcggaca cccgcggaaa atgtttcgtc cagttcttgc cggacacgtt
     1681 caagccatcg gggagggctg ctcgctcgca cggtcttagc agtgggcagc gaagccagga
     1741 cttcatacac ggtatcttcg agttcttcat ttggaagagc tgtgcgccgg tatgtttgca
     1801 agagtgtcaa catccagcgc gcaagagcac cgccatgaat ccattgccac cggttgagtt
     1861 ttagatcgcc gtcaataagc gactggatga ttggcggctc aaactggact gagaacatgc
     1921 gcgcacccac agttccaaat cgatccgcat gttctgtgtc gccgggcttg accacaacgc
     1981 tgagaggaaa agcgtcttca acgttgtttc cgacgctctc actcaacgac ccggccagta
     2041 caactgagat gctggcgtac gaatgtgcat gtttatcctg ccggtctcct ggcgagtaga
     2101 cgtgctcgat aacgcggaca ttgccggcaa atgcggcact gcgtctcgag cttcgcgtgg
     2161 tgaaagtttg cctggatgcg gactgccgtg tcataccctg atgacgcagc tatacgccga
     2221 ctgatcgatt tgtgttccgt ggttcctgag agagcttggc tgtctttatt gcttcagtac
     2281 cgacttgatg gccggccaat gtgaatatgc ggccccgtag ccacgccggg aatcgcaccg
     2341 cgaaatgccg aaaaggggat tccattgcgg cgcatgaaat cgatcagcgc ctggccttca
     2401 gctccatccg gatgcagtga aacatccatc gcattgcggt gatccaagtg ccagcgattg
     2461 tgaattgcgc cctgcccgaa aacagcaatc ggcagcggcc gtttgaaagt ctgttgaaag
     2521 aacatctcga gcttgccggc ttgtgagatg gcccagctgc ctgcgccggt gtagcgaatg
     2581 aatgacgtcg tctgaatcaa tccgcctttt ggcttcagtc gcagcctggc aatgtccttt
     2641 tcaccttcca tttccagcag cgtttgcgag atctgcgtct cggcgccttt catctgattc
     2701 tgaacgccgg cgattctgag ttgctcgtcg gccaccgcct gttcgctttc t
//
LOCUS       DATDBY010000037         4828 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_349834, whole genome shotgun sequence.
ACCESSION   DATDBY010000037 DATDBY010000000
VERSION     DATDBY010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4828
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349834"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..586)
                     /locus_tag="VIT19_00795"
     CDS             complement(<1..586)
                     /locus_tag="VIT19_00795"
                     /inference="COORDINATES: protein motif:HMM:NF013538.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837538.1"
                     /translation="MRLVLAARRSELARIQAFQVGRTLQNAHPNISIEYSFHESLGDK
                     NQNDPLWQMPEKGVFTQDLREGLLAGQYDLAVHSWKDLAIEDDGETVIAATLPRADMR
                     DLMLVRRDRWEEVRRTGRLTILTSSPRRSYNLDSFLRTALPRRIEELIFEPVRGNVPT
                     RVRKMWNPGADGLIVAKAALDRLLEAPEEEFEATK"
     gene            complement(577..1479)
                     /locus_tag="VIT19_00800"
     CDS             complement(577..1479)
                     /locus_tag="VIT19_00800"
                     /inference="COORDINATES: protein motif:HMM:NF017051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837539.1"
                     /translation="MLEDLIVLHHPAKPGERWPMAINGLEWQTCLRRIVLLHKSESAA
                     LIPALPEGFETYEGQLAHNFLLEVICGLRSPLVAETAVMGQFKEFCASARFPMNEWGA
                     FLRRVTSDLLVDAKHVRRRHLEGLGSQSYGGMVRQHLKGVPSVVVLGAGQLAEEILPW
                     MVGKTDVTVCARNPERAGSLTEKFPQVRLAQFALIAPVEESRETAIVIAAPISASDVK
                     QWMAAQPTPVVKVIDLRGEAETDPLNCSLPVVRLSEMFAALKNERPESAARVAAARDE
                     IRKAGQRLIEQAQFRPFGWEDLCA"
     gene            complement(1564..2034)
                     /locus_tag="VIT19_00805"
     CDS             complement(1564..2034)
                     /locus_tag="VIT19_00805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837540.1"
                     /translation="MFCPSCGTEQHQTLSYCNRCGANLRPLQSGVPPGKLVGASWAIS
                     VAVALVTLGGFGMIFGLVLALISSGMSLSAGGIGLVILISLIILTIDWLLIRQLSRVL
                     NLPRAARETATVSQPALNESSPTLLADPPQPVSSVTDRTTRTFEPVVRERDTKR"
     gene            complement(2081..4372)
                     /locus_tag="VIT19_00810"
     CDS             complement(2081..4372)
                     /locus_tag="VIT19_00810"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEY5837541.1"
                     /translation="MLDRSLLRKPALALVAMVFAGGWVAGRIKAAPVEIIGKVEINGQ
                     TLTITKLDPISHLTSSITSCGQGVLYSAFTDGTLWVNLKGGIGAWKKVDAGSPGPKIA
                     CDRINLYALQGNGVLLHAKTRSDGQLAARNASGPQVWSQSNDGKLLKVPVRTSDIQGG
                     MGNIYALVFDQSTRVGTLYASELRQAMSPSGYAQGSEDSWVQLANNLGAHLATGAGSK
                     AMYTAFTTSLGYRKANRAFIANPDSTLYYNDASLYGQNFWTPFPNAGFVIESITADDS
                     NTMYALVLKNYAKHLIRFSFDESNCGDSLDNDANGLIDVEDSVCRGKLATDWCRGRTG
                     SYCIDRIEHSQGRADALVTCNSGGQQPTIKMGRCTMVTPGNDSLTPDRVMNEPFGSGH
                     YCNVISPDGSWDFHYMGSTPCQTLLDKPGRATVVRAGIYSTNGLNNVHVRCDDGWTFT
                     APENAGTTPLASAHNLARNFNKKRCVFTVSPKAMRVFNAPFPTSVWGDPLLGGRGYFV
                     GHVFDHVPKCAPFDPGCPCPTLDCLVALSDYGVESGTTSWLDNNGREVKHFGENQNSY
                     DFGMNEGTPLRSLGYGRVVISRDRDLSSQGATGTPYQGEIFIRYEVGTPPYSETFVAY
                     YAHVGKRLVVTDQTVAPGQLIGYVGTTGSSSEPHLHFGLVRLSNTNGRTVQRGDRFGY
                     LVPFLSDLTNVYGVNRESLPGLIDPYGWRAPTGVDPMGYRWSRARWFDPVYGSSSVIG
                     AGAWSPQMWSSPSETPPYPAPKK"
     gene            complement(4462..>4828)
                     /locus_tag="VIT19_00815"
     CDS             complement(4462..>4828)
                     /locus_tag="VIT19_00815"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HEY5837542.1"
                     /translation="HRCARIIFSLSFHLEKMTPQECIDYLVNRVGHERDNATAEVRRS
                     FDGSYGPLYQIAYLLGGRQFYALHHELVDSKKMTNREFHDWILKENRIPVEMVRAILT
                     NQKLTRDFKTSWRFLPNSL"
BASE COUNT         1024 a         1384 c         1369 g         1051 t
ORIGIN      
        1 ctttcgtggc ctcaaactct tcctccggcg cttccaacag ccgatcgagc gcggctttgg
       61 cgacaatcaa cccgtccgct cccggattcc acattttgcg cacccgcgtc ggcacgttgc
      121 cgcgaaccgg ctcaaatatc agttcctcaa ttcgtcgggg aagggcagtt cgcaagaacg
      181 aatcgaggtt gtaactgcgt cgcggcgagg aagtgagaat cgtcaatctc ccggtgcgcc
      241 gaacttcctc ccaacgatct cttcgcacca acatcagatc gcgcatgtcg gcgcgcggta
      301 gtgttgccgc gattacagtc tcgccgtcgt cttcaatcgc gagatctttc catgagtgca
      361 cggccagatc gtattggccg gcgagcagac cttcgcgcag gtcttgggtg aagacacctt
      421 tctcaggcat ctgccacaac ggatcgtttt gattcttgtc gccgagcgat tcgtgaaagg
      481 aatactcgat gctgatgttt gggtgtgcgt tttggagagt gcggccgact tgaaatgcct
      541 gaatacgcgc caactcgctg cgacgcgcag cgagaactag gcgcataaat cttcccaacc
      601 gaaggggcga aactgcgcct gttcaatcag ccgctggccc gcttttctga tttcgtcacg
      661 cgccgcagcc acgcgtgcgg cggactcggg tcgctcgttt tttaaggccg cgaacatttc
      721 cgacaatctg acaacaggca acgaacagtt caatggatcg gtttccgctt cgccgcgaag
      781 atcgatcact ttgacgactg gagttggctg cgccgccatc cattgcttca catcgctcgc
      841 gctgatcggc gccgcgatta caattgcggt ctctcggctt tcctcgaccg gcgcgatcaa
      901 agcgaattgc gccagacgaa cctgcggaaa cttttctgta agcgatcctg cgcgctcagg
      961 attgcgggcg cagacagtta cgtcggtctt gccaaccatc cagggaagaa tctcttcggc
     1021 aagctgaccg gcgcccagca cgacaactga cggaacgccc ttgagatgtt gcctgaccat
     1081 gccgccatac gattggctgc ccaggccttc gaggtgccgg cgccgcacgt gtttagcgtc
     1141 gacgagcagg tcggaagtta ctcgccggag gaacgcgccc cattcgttca tcggaaatct
     1201 tgcgctcgcg cagaactctt tgaactggcc catgactgcc gtttcagcaa ccaggggcga
     1261 acgcaacccg caaatcactt cgagcaggaa attgtgtgcg agttgtcctt catatgtttc
     1321 gaagccctcg ggaagagcag gaatcagcgc ggcgctttcc gatttgtgca gcaggacgat
     1381 tcggcggaga caggtctgcc actcgagccc gttgatggcc atcggccacc tctcgcccgg
     1441 tttggcggga tggtgcagaa cgattagatc ttccagcacg gcatcatttt agaagtcgcg
     1501 caacgccgag tgtcatgatt ttgtcatagc ccagagaatt tttggatttt cgatcgctgg
     1561 cgtttatcgc ttcgtgtcgc gctctctgac gacaggctca aaagtgcgag tggtgcgatc
     1621 ggttacgctg gaaacgggtt ggggtggatc agcgagcagt gtcggcgagc tttcgttcag
     1681 cgcgggctgt gaaactgtgg ccgtctcgcg ggcggctcgg ggcaggttaa gtacccggga
     1741 caactgtcga atcaatagcc aatcgatggt caggataatt agcgaaatga gaattaccag
     1801 accgatgccg cctgctgaca gcgacattcc gctactgatt agcgctaata ccaaaccgaa
     1861 gatcattcca aagccgccaa gcgtcaccaa cgccacggcg actgagatag cccaagatgc
     1921 tcccaccagt ttgccgggcg gcacaccgga ttgaagaggc cttaagttgg cgccgcaccg
     1981 attgcagtaa ctcaacgtct gatgctgttc ggtgccgcac gacggacaaa acatatttgg
     2041 ttctcacttc ctgacttcat aagtctgtgt agccggcgac tcacttcttc ggcgcgggat
     2101 agggcggagt ttcggacggt gagctccaca tctgtggcga ccacgcaccg gcgccaataa
     2161 cgctactcga gccgtatacg ggatcaaacc atctggcgcg ggaccatcgg tatcccattg
     2221 gatcaacgcc cgttggggcc cgccaaccat agggatcgat caggccgggt aaagattcac
     2281 ggttgacccc gtaaacgttc gtaagatccg agagaaacgg aacgaggtaa ccaaatctgt
     2341 ctcccctctg aacggtgcgg ccgttcgtgt tgctcaggcg aaccagacca aagtggaggt
     2401 gcggctcact ggacgaaccc gtcgtgccca cgtaaccgat caactggccg ggcgccactg
     2461 tctgatccgt aactaccaga cgcttgccga cgtgagcata gtacgccacg aaggtctcgg
     2521 aataaggcgg agttcccact tcgtagcgaa tgaagatctc gccctggtaa ggcgtgccgg
     2581 tggctccttg cgaagagagg tcgcgatctc gcgaaataac gacgcgtcca taaccgagtg
     2641 agcgcagtgg cgtgccctcg ttcatgccaa agtcgtacga gttctggttc tcgccaaaat
     2701 gcttcacttc gcggccgttg ttgtcgagcc acgaggtcgt gccagattca accccgtaat
     2761 cactgagcgc gacgaggcag tcaagggttg ggcaggggca gccggggtcg aagggcgcgc
     2821 actttgggac gtgatcgaag acatgaccca cgaagtagcc gcggcctcca agcaagggat
     2881 ccccccaaac gctcgtcgga aacggggcat taaagacccg catagctttt ggagaaaccg
     2941 taaatacgca acgcttctta ttgaaattgc gggccaggtt atgggcggac gcaagcggag
     3001 tcgtccccgc gttctcaggc gcagtaaagg tccagccgtc gtcacaccga acatgaacgt
     3061 tgttgaggcc gttagtcgaa tagatgcccg cgcgaaccac ggtcgcccgc ccaggtttgt
     3121 ccagcaaggt ctgacacggc gtactaccca tgtagtgaaa atcccacgac ccatcaggag
     3181 agattacgtt gcagtagtga ccggatccga aaggctcgtt catgacgcgg tccggagtca
     3241 ggctgtcatt gccgggcgtt accatcgtgc agcgacccat tttgattgtc ggctgttgtc
     3301 ccccggaatt gcaggtaacg agcgcatccg cgcgtccctg cgagtgctcg atccgatcga
     3361 tgcagtagct gcccgtgcga ccgcgacacc agtcggtggc caacttgcca cggcagaccg
     3421 agtcctcaac atctatcagc ccgttcgcgt cgttatccag gctgtcgccg caattgcttt
     3481 cgtcaaacga gaacctgatg agatgtttag catagttctt aagcaccagc gcgtacatcg
     3541 tgttcgaatc gtcggcagtg attgactcga tcacgaatcc ggcattcgga aaaggggtcc
     3601 agaagttttg tccgtagagc gacgcgtcgt tgtaatagag agtagagtcc ggattggcta
     3661 tgaaggcgcg attggctttg cgatagccca ggctggtggt gaaggctgtg tacatcgcct
     3721 tcgaaccggc tccggtcgcc aggtgagcgc cgagattgtt ggcaagctgc acccacgaat
     3781 cctctgagcc ttgcgcgtaa ccggaaggtg acattgcctg gcgcaactcg ctcgcataaa
     3841 gcgttcccac acgtgtgctt tggtcaaaca ccaatgcata gatgtttccc attcctccct
     3901 gaatatcgct cgtgcggacc ggtaccttga ggagtttgcc gtcgttgctt tggctccaga
     3961 cctgcgggcc gctcgcattc ctcgcggcga gctggccgtc gcttcgagtc ttcgcgtgaa
     4021 gtaacacacc attcccctgg agtgcgtaga ggttaatccg atcgcaggcg atcttggggc
     4081 cagggcttcc ggcatccacc tttttccagg ccccaatgcc gcctttaaga ttgacccaca
     4141 gcgtgccgtc tgtgaaagct gagtaaagca cgccctggcc acacgacgtg atactcgagg
     4201 ttagatggct gattggatcg agcttcgtaa tggttaaggt ctggccgtta atttcaacct
     4261 tgccgatgat ttcgaccggc gcggctttga ttctgccggc gacccaacca cccgcgaaca
     4321 ccatggctac gagcgcaagg gccggcttcc gtaacagtga gcgatcaagc atggcttcct
     4381 cctgtggact cgacgcgagg tgttttcgcg cggttagtcg aagtgaataa atcttaaact
     4441 cgcttttctg cgggattgac ttcaaagcga gttcggcaaa aatcgccaac tggtcttgaa
     4501 gtccctcgtc agtttctgat tagtcaaaat cgcgcggacc atttccaccg gaatccggtt
     4561 ctctttcaag atccaatcgt gaaattcgcg gttcgtcatc ttttttgaat ccaccagttc
     4621 gtgatgcaaa gcatagaact gcctcccgcc gagcaggtaa gcgatttgat agagcggccc
     4681 atagcttcca tcgaatgaac ggcgcacttc ggccgtggcg ttgtcgcgct cgtgtccgac
     4741 acgatttacg agatagtcga tgcactcctg cggcgtcatt ttttccagat ggaagctcaa
     4801 cgagaaaatg attcgcgcgc agcggtgc
//
LOCUS       DATDBY010000038         2210 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2197046, whole genome shotgun sequence.
ACCESSION   DATDBY010000038 DATDBY010000000
VERSION     DATDBY010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2197046"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..807
                     /locus_tag="VIT19_00820"
     CDS             <1..807
                     /locus_tag="VIT19_00820"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5837543.1"
                     /translation="AFVGWRNKIPTIGFQKGFEYNGKPNRFVLRSGWYDHHVACSNAI
                     ANCLFELGLPRERCSIMYDGVAPPPDGFDAERRTDRAPVISMYSLLQEWKGQDVFLKA
                     VAKVVKKYAEPFRVVIAGDSPDGSREFPDHLKALAAELGIADRVDFRGHIRNVWQLLA
                     ETDIAVHASTKPEPFGTVVAEAMIAGVAVIATKGGGVAEYVTPGETGLQVEMGDVDAM
                     AQAIERLLRDAELRRSLAQRGRDFALKEFRPSLYAERMTELYQRVLASRN"
     gene            815..2023
                     /locus_tag="VIT19_00825"
     CDS             815..2023
                     /locus_tag="VIT19_00825"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5837544.1"
                     /translation="MNASFHNSSKPNVLLLLNSFETGGAEGQLVLLARLLIESGRFGV
                     HLAGLSRTGPLLAEAEKLGIGPIPEFPLTSFYDRNMFKQLRRFRSFLRERKIDVVHTD
                     GFYTNVFGIIGAKLAGVPARIGFRGETQTDGRTPAQNFIERSAFRFASVVHANSEAVK
                     DFLVEQGVPARDIAVVYNGLDFARVIPPPALTRDAALQLFDLPRERRFVTMVANLHNP
                     VKDYPMFLRAAASVRANISKAAFVVAGEGEMLEDLRALARDLRIEQDVFFIGRCNRVA
                     ELLFASDVCVLSSKAEGFSNAILEYMGAARPVVATDVGGAREAIAEGENGYLVASGDY
                     QTMATRIAELLRDPQQASAMGERGRAIVQQKFSSEVQLQRTAELYEKFLSKSLSPELQ
                     RVMASPERAL"
BASE COUNT          446 a          619 c          661 g          484 t
ORIGIN      
        1 gcattcgtcg gatggcgtaa caagattccc acgatcggct ttcaaaaagg attcgaatac
       61 aacggcaagc cgaatcgatt cgtgctgcgc agcggctggt acgatcatca cgtcgcctgc
      121 tcaaatgcga ttgccaattg cctgtttgag ttgggactac cgcgcgagcg ctgttcaatt
      181 atgtatgacg gagtcgcgcc gcctcccgat ggatttgacg ccgaacgccg gaccgatcgc
      241 gcaccggtta tttcgatgta cagcctgtta caggagtgga agggacagga cgtcttcctc
      301 aaggcagtcg cgaaagttgt caaaaaatat gcggaacctt tccgcgtcgt catcgcaggc
      361 gattcgcccg atggcagccg tgaatttccc gaccatctca aagctttggc ggcagaattg
      421 ggaatcgccg atcgcgtgga cttccgcgga catatccgca acgtttggca gttgctggct
      481 gagacggata ttgccgtcca tgcgtcaacg aaaccggagc cattcggaac cgtcgttgct
      541 gaggcaatga ttgccggcgt agctgttatc gcgaccaagg gtggcggcgt cgccgaatac
      601 gtgaccccgg gtgagaccgg tcttcaggtt gagatgggtg atgtggacgc catggcgcag
      661 gcgatcgaac gtttgttgcg cgatgccgaa ctgcggcgct cgctggcgca gcgcggccgc
      721 gactttgcgc taaaggaatt tcgaccctct ctgtatgccg agcgaatgac tgagttgtat
      781 cagcgcgtac tggcgagcag aaactgattt aacgatgaac gcctcttttc acaattcatc
      841 gaaaccaaac gttctgctgc tgctgaatag ctttgagacc ggcggggcgg aaggacaact
      901 cgtgctgctc gcgcgtttgc tgatcgaaag tggacggttt ggagtgcacc tcgccggctt
      961 gagtcgcacc ggccccttgc tcgccgaagc agaaaaactt ggtatcggtc cgattcccga
     1021 gtttccgctc accagcttct atgaccgaaa catgttcaaa cagcttcgcc ggtttcgatc
     1081 attcctgcgc gagcgcaaga ttgacgtggt tcacaccgac ggcttctaca caaatgtttt
     1141 tggcatcatc ggcgcgaagt tggccggagt tccggcgcgc ataggttttc gcggcgagac
     1201 gcaaaccgat ggacgtacgc ccgcacagaa tttcatcgag cgctcagcat ttcgtttcgc
     1261 cagtgtcgtt cacgcaaact ctgaagcggt gaaagacttt ttggttgaac aaggcgtgcc
     1321 tgcgcgagac attgcggtgg tttacaacgg cctcgacttt gcgcgagtga tcccgccgcc
     1381 ggccctgact cgcgacgcgg cgctgcaact tttcgattta ccgcgcgaga ggcggttcgt
     1441 cacgatggtc gcgaacctgc acaatccggt gaaggattat ccgatgttcc tgcgcgccgc
     1501 agcttccgtt cgcgcgaaca tttcgaaagc ggcttttgtg gtcgccggcg aaggcgagat
     1561 gcttgaagac ctgcgcgcac tcgcgcgtga tctgcgaatc gagcaggatg ttttctttat
     1621 cgggagatgc aatcgcgtgg cggaactgct gttcgcgtcg gacgtgtgcg tgctcagttc
     1681 gaaagccgaa ggattctcga acgcgattct tgagtacatg ggcgcagcgc ggccagtcgt
     1741 agctaccgat gttggcggcg cgcgcgaagc aatcgccgaa ggtgaaaatg gttacctcgt
     1801 cgcctctggc gattatcaaa cgatggcgac tcggattgca gagttgctgc gcgatccgca
     1861 gcaggcaagc gcaatgggcg agcgcggccg cgcaatcgtg cagcagaagt tttcctccga
     1921 agttcagctt cagcgaacgg ctgagcttta cgagaagttt ctatcaaaga gcctgtcgcc
     1981 agagttgcaa cgcgttatgg catcgcccga acgcgcgctt tgagcaacac acgcgattcg
     2041 cgcttcgcgc tcaggcgggc agggatgccc gcgcccctcc cggtactgac atgaaacttc
     2101 gtcgccgcct attgaagcgc gtgctgatca cgacgctctg tctcgcactc gtctggccgt
     2161 ttgtcgcctg ggcggccgcc aaatttctgc acgtgcaaca acccgtcgcg
//
LOCUS       DATDBY010000039         2041 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_126972, whole genome shotgun sequence.
ACCESSION   DATDBY010000039 DATDBY010000000
VERSION     DATDBY010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126972"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..744
                     /locus_tag="VIT19_00830"
     CDS             <1..744
                     /locus_tag="VIT19_00830"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEY5837545.1"
                     /translation="VDQLFPELKALIDVPQEPEWHPEGDVWIHTLLTVDRARELIDDL
                     TYAKQVTVMLAALAHDFGKPATTAFIDGRIRSREHEEAGVAPTISFLDRLNIHTLDGY
                     DVRAQVIAIVRDHLKPGEFFKKRQEVSVGAFRRLARKCDLDLLYRVAKADSLGRNAEW
                     VPIEKWYDAEAQEWFIERVRELELQDGAPAPILLGRHLLEMGMQPGPRVGEITRAVYE
                     MQLDGRVLGLADAQEAAKEMISTDYTEVG"
     gene            818..>2041
                     /locus_tag="VIT19_00835"
     CDS             818..>2041
                     /locus_tag="VIT19_00835"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY5837546.1"
                     /translation="MIDFQLTDDHDALVQAVREFAQKEVAPYIKEWDEKQEAHPEIFK
                     KMAELNLLGVCIPEQYGGAGFDYISLGLVCEELEAVDTFLRVAMSVHTGLNCLTLYAW
                     GTEEQKQKYLVPQAKGEKIATYGLTEPGAGSDVVGSRSTARREGDEYVLNGEKMWISL
                     AGFADNFLFFCWTDEEKRRKRDHSGMSCFIIERGMKGFASGTIHGKLGIRAGNTGYFS
                     LQDVRVPKENRLGEEGEGFKIAMFALEQGRYTVAAGATGVIRASRDASVAYANERETF
                     GTKIANHQLVKQKIADMEADYQMSRLLWLKAGWQKNEGVPSGRATSLAKWQATVRSEK
                     AASMAIEVHGANGYSNDYPVERYLRNCKAAVIYEGTRDIHTLMQADWALGLKKEKPAR
                     KSLPPWKAHETRGAGA"
BASE COUNT          466 a          515 c          650 g          410 t
ORIGIN      
        1 gtcgatcagt tgttcccgga actcaaggcg ctgatcgatg tgcctcagga accggaatgg
       61 catccggaag gtgacgtctg gattcacact ctgctgacag tcgaccgcgc gcgcgagtta
      121 attgacgatt tgacgtacgc gaaacaagtg accgtgatgc tggccgcgct cgcccatgat
      181 tttggcaagc ccgccaccac cgcttttatc gacggtcgca ttcgttcgcg cgaacatgaa
      241 gaggcgggcg ttgcgccgac gatcagcttt ctcgatcgat tgaacatcca cacgctcgat
      301 ggctatgacg tgcgcgcgca ggtgattgcc attgtccgcg atcatctgaa gccgggagag
      361 ttcttcaaga aacgtcagga agtaagcgtc ggcgcgtttc gtcgtttggc gcgtaagtgc
      421 gatctcgatt tgctttatcg agtggcaaag gcggattcgc tcggccgcaa cgcggaatgg
      481 gtgccgatcg agaaatggta cgacgcggaa gctcaagagt ggttcattga acgcgtgcgc
      541 gaacttgagt tgcaagatgg cgcgcccgcg ccaattctgc ttggccgcca tttgctggag
      601 atgggaatgc aaccggggcc gcgcgtcggc gagatcacga gagcggttta cgagatgcag
      661 ctggacgggc gagtgcttgg tttagccgat gcgcaggaag cagcgaaaga gatgatctcc
      721 accgattaca cagaagtggg ataggaccca taggtcttta tgggacacat gggacccata
      781 agtctcatcg tctaacgttg tgctaaagta tcgcgccatg attgattttc aacttaccga
      841 cgatcacgac gcgctggtgc aagctgtgcg cgagtttgcg cagaaagaag tcgcgcccta
      901 catcaaagag tgggacgaga agcaggaagc gcaccccgaa attttcaaga agatggctga
      961 gctgaatctg ctcggcgttt gtattccgga acagtatggt ggcgcgggat tcgactacat
     1021 ttcgctcggc ctggtttgtg aagaactgga agccgttgac acgttcttgc gcgtcgcgat
     1081 gtcggtgcac acgggcctga attgcctgac gctttacgcg tggggcactg aggagcagaa
     1141 gcagaaatat ctagtgccgc aggcgaaagg cgaaaaaatc gcgacctacg gactgactga
     1201 gcccggcgca ggttctgacg tggttggctc gcgttcgacc gcccggcgcg agggcgacga
     1261 atacgttttg aatggcgaga agatgtggat cagtctcgca ggcttcgccg acaacttcct
     1321 tttcttctgc tggaccgatg aagagaagcg tcgcaagcgc gatcactcag gcatgtcctg
     1381 cttcatcatc gaacgtggca tgaaaggatt tgcctcggga acgattcacg gaaagctcgg
     1441 cattcgcgcc ggcaacactg gctacttttc tttgcaggac gtgcgcgtgc cgaaagaaaa
     1501 tcggctcggt gaagaaggcg aaggtttcaa gatcgccatg ttcgcgctcg agcagggaag
     1561 atataccgtc gcggccgggg cgacgggggt gattcgggca tcgcgtgatg cgtcggtggc
     1621 ttacgcgaac gagcgcgaaa cattcggaac gaaaatcgcc aaccatcaac tcgtcaaaca
     1681 gaagattgcc gacatggagg ctgactacca gatgtcgcgg ctgctttggt taaaggccgg
     1741 ttggcagaag aacgaagggg tgccgagcgg ccgggcgact tcacttgcta agtggcaggc
     1801 gactgtacgc agcgagaaag cggcatcaat ggcgatcgag gttcacggcg caaacggtta
     1861 ctcgaacgat tatcccgttg aacgttacct gcgaaactgt aaagccgccg tcatctacga
     1921 agggacgcgt gacattcata cgttgatgca ggcggactgg gcgctgggtt tgaagaaaga
     1981 aaagcctgcc cggaagagtc tgccgccgtg gaaagcgcac gagacgcgcg gcgccggggc
     2041 g
//
LOCUS       DATDBY010000040         2207 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1363563, whole genome shotgun sequence.
ACCESSION   DATDBY010000040 DATDBY010000000
VERSION     DATDBY010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1363563"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..779
                     /gene="aqpZ"
                     /locus_tag="VIT19_00840"
     CDS             <1..779
                     /gene="aqpZ"
                     /locus_tag="VIT19_00840"
                     /inference="COORDINATES: protein motif:HMM:NF003838.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015250 - water channel activity [Evidence
                     IEA];
                     GO_process: GO:0006833 - water transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HEY5837547.1"
                     /translation="LQGSASRLGSIRRTAMGLSKKLTAEFFGTFWLVFGGCGSAVLAA
                     AFPAVGIGLLGVSFAFGLSVLTMAYAVGHISGGHFNPAVTIGLFAAKRIPGSDVLPYI
                     VAQVIGAIVAAAMLYLIASGKAGFDVSAGFASNGFGAHSPGGYSLLAAAVSEVVMTLM
                     FLLIILGATDPRAPQGLAPIAIGFALTLIHLVSIPVTNTSVNPARSTGPALFVGGWAL
                     TQLWLFWVAPIVGAVLAGLVHRAFLHNIDATPAMARSEKP"
     gene            complement(816..1235)
                     /locus_tag="VIT19_00845"
     CDS             complement(816..1235)
                     /locus_tag="VIT19_00845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837548.1"
                     /translation="MGWLTDLFRDVPLSVELREKLAAVEAENDGVKTDNVILRDDLRE
                     AKAQILRLQKQLDQYTHQTKLDETDISILQEVALTSEPAASYLAKKLSIDFGVMDFRL
                     AQLTETDYLSAWSIGGVERYSLRPKGREYLIRHNLVS"
     gene            complement(1671..>2207)
                     /locus_tag="VIT19_00850"
     CDS             complement(1671..>2207)
                     /locus_tag="VIT19_00850"
                     /inference="COORDINATES: protein motif:HMM:NF024487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C-terminal helicase domain-containing protein"
                     /protein_id="HEY5837549.1"
                     /translation="SRPENANQRLNVAGPLGGTGLRFVPVEHDANQSDSPEEAKNVAE
                     LVQTLLSNATWTDKQCQIGLVTLEDILIVAPYNAQVSLLLRELPKGSRVGTVDKFQGQ
                     EAPVVIYSMATSTAQDAPRGMEFLYSGNRLNVATSRAQCVTVLVASPALFDVLCKTPR
                     QMELANAFCRYLEMSEVI"
BASE COUNT          460 a          590 c          603 g          554 t
ORIGIN      
        1 tactgcaggg cagcgcttcg cgcctcggaa gcataaggag aacggcgatg ggtctcagca
       61 aaaaattgac ggctgaattc ttcggtacat tctggctagt cttcggcggt tgtggcagcg
      121 cggtattggc tgcggcattt ccagcagtcg ggatcgggtt gttaggtgtt tcgttcgctt
      181 ttggtctttc cgtgctgacc atggcttacg ccgtggggca catctcaggt ggacacttca
      241 atcctgcggt aacgatcggg ttgtttgccg cgaagcgcat tcctggttca gacgtcttgc
      301 cttacatagt tgcgcaagtg attggcgcga tcgtcgcggc ggcgatgctc tatctgatcg
      361 cgagcggcaa ggcgggcttt gacgtatcgg cgggtttcgc ttcaaacgga ttcggcgcgc
      421 actctcccgg tggttactct ctgctcgcgg cggcggtttc ggaagtggtg atgacgctta
      481 tgttcctgct gatcattctg ggcgcgactg atccgcgcgc gccacaggga cttgcgccaa
      541 ttgctatcgg tttcgcgttg acgttgattc acctcgtcag cattccggta accaacacgt
      601 ccgtcaatcc cgcgcggtca accggcccgg cgttattcgt tggaggttgg gcgctcacgc
      661 agctctggct tttctgggtg gctccgattg tgggcgcggt cctggcaggt ctggtgcacc
      721 gtgcgttctt acataacatc gatgcgacgc ctgctatggc caggtctgag aagccgtgaa
      781 ccttggcaag cgtatttaat tctcgcaacc ggcagtcagg aaacgagatt atgcctaatc
      841 agatattcgc ggccctttgg tcggagtgaa taccgttcaa cgccaccgat gctccacgcg
      901 ctgaggtaat cggtttcagt cagctgggcc aaacgaaaat ccatcacgcc gaaatcgata
      961 ctcagcttct ttgcaagata tgatgcggca ggttcgctgg tgagggctac ttcctgcagt
     1021 atgctgatat cggtttcatc aagcttagtc tgatgcgtat attgatcaag ctgtttttga
     1081 agccttagta tttgagcttt cgcttcccgc aagtcatctc taagaatcac gttgtccgtc
     1141 ttgacgccat cgttctcagc ctcaaccgcg gctaacttct cgcgcagttc aaccgaaagc
     1201 ggaacatctc gaaacagatc agtgagccag cccataatgt taagtcgaga ggtaagatcg
     1261 gggcagggac gacaattaac tttgtatcac accggataag ttttccgcca gattctaatt
     1321 ggaaatttgt tggtggagca gagagggatc gaacccctga cctccgcaat gcgaacttcg
     1381 atcgactcag gaactgacag gctttgcctc aaaaagtctg gaagttcatg gtctgaaggt
     1441 tccgcctgtc attcacaccg ggcttcagcc cggtgatcca cagccggtaa aggaaccgtt
     1501 tcaacggttt ttccaggtgc aggcacaact ggatcatgat caggccctcg gttcggtaag
     1561 aagtggaaac ctaaaacggt ttcacggatc tctccctgcc aaagatcacc gggctgaagc
     1621 ccggtgtgaa tgagagactt ggcactctct gactcttgag ccaaagcctc tcagattact
     1681 tcgctcatct ccaaatagcg gcagaatgca tttgccagtt ccatctggcg cggggtcttg
     1741 catagcacat cgaacaacgc aggactcgca accaggaccg tcacacattg ggcgcgcgag
     1801 gttgcgacat tcaatcggtt tccactgtac aagaattcca ttccgcgagg cgcatcttgt
     1861 gcagttgatg tcgccatcga ataaatcact acgggagcct cctgcccctg aaacttgtcg
     1921 acggttccca cccggcttcc ctttggtaac tcccgcagca gcaacgacac ctgagcgtta
     1981 taaggggcga cgatcagaat gtcttccagg gtaactaatc cgatttggca ttgcttgtca
     2041 gtccacgttg cattgctaag taacgtctgg actaactcag ccacgttttt cgcttcttcg
     2101 ggtgaatcgc tttggtttgc gtcatgttcg acgggaacga aacgcaagcc agtaccgccg
     2161 agtggaccag cgacgttcag tcgttgattc gcgttctcag gtcgcga
//
LOCUS       DATDBY010000041         2035 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2602441, whole genome shotgun sequence.
ACCESSION   DATDBY010000041 DATDBY010000000
VERSION     DATDBY010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2602441"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..985
                     /locus_tag="VIT19_00855"
     CDS             <1..985
                     /locus_tag="VIT19_00855"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5837550.1"
                     /translation="ATLGLFLSLVVILVIQNLMSREAFATWGWRLPFIISIFLVAVSL
                     YIRLRMQESPIFTHIKAAGMTSAQPLKEAFTQWDNLKRVLISLFGATAGQGVVWYTGQ
                     FYALFYLQAILKVNTTSANYIVATALLLGIPFFVLFGALSDRFGRKKIMMLGCLLAAL
                     TYLPIYHAMQQAAGSQVVTAVSQRNAVTGAINLTPQTSVNGTLQPAAEVLTYTSLGNL
                     FQNTVAWKLILLVFVQVIFVTMVYGPIAAYLVEAFPAKIRYTSLSLPYHIGNGVFGGL
                     LPLIGLSVIAQTGNIYAGLYYPIVVAGLTFIIGSLLLPETRHVRIWQEVKE"
     gene            1131..1610
                     /locus_tag="VIT19_00860"
     CDS             1131..1610
                     /locus_tag="VIT19_00860"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5837551.1"
                     /translation="MSVKPIPEGYHSVTPYLILRGGGAAIEYYQKAFGAVELFRIPAP
                     GGTVGHAEIKIGDSIIMLADEHPDMGYNGPETIGGSAVSLMIYVEDVDTVFERAVTAG
                     ATVKQALEDKFYGDRSGTIVDPFGHIWHISTHKEDVPAEEMERRAKEHSAAASGGGQ"
     gene            1736..>2035
                     /locus_tag="VIT19_00865"
     CDS             1736..>2035
                     /locus_tag="VIT19_00865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837552.1"
                     /translation="MKPRIYTALFLTLLLSGAACSSSANRTTNQQPGAPASGELRFKA
                     PDGWITEKTTSTMRVAQYKLPKADGDAEDASLVLYYFGAAQGGSTQANVERWINQL"
BASE COUNT          444 a          551 c          569 g          471 t
ORIGIN      
        1 agcgacgctc ggtttgtttc tctcgctggt cgtcatcctc gttattcaga acttaatgag
       61 ccgggaagca ttcgccactt ggggatggcg gctgcccttc atcatctcaa tattcctcgt
      121 cgccgtttcg ctttatatcc gtctgcggat gcaggagtcg ccaatcttca cccacatcaa
      181 ggctgcggga atgacttcag cgcaaccgct gaaggaagcg ttcactcagt gggacaatct
      241 caagcgcgtc ctgatctctt tgttcggcgc gacggcaggg cagggagtcg tgtggtacac
      301 cggccagttc tacgcgctct tctatttgca agcgattctg aaggtgaaca cgacgtcggc
      361 gaactatatc gtcgcgaccg cgctgttgtt gggcatcccg ttctttgtct tgtttggcgc
      421 gttatccgat cggtttggac gaaagaaaat catgatgctc ggctgtttgc tcgccgcgct
      481 cacatatttg ccgatctatc acgcgatgca acaagccgcg ggttcacagg tcgtcactgc
      541 cgtatcacaa agaaatgcgg taacgggcgc gattaatctg acgccgcaga catctgtcaa
      601 cggaactctt cagcccgccg ccgaagtcct gacctacacg agtttgggaa acctttttca
      661 aaacaccgtg gcgtggaagc tgatcctact cgtatttgtg caggtgattt ttgtcaccat
      721 ggtgtacggg ccaattgctg cctatctcgt cgaagcattt ccggcgaaga ttcgttatac
      781 gtcgctgtcg ctgccatatc acatcggtaa cggtgtgttt ggcgggctgc tgccgttgat
      841 cggcttgagc gtcatcgccc aaaccggcaa tatttatgcg ggactgtatt acccgattgt
      901 tgtcgccggg ctgactttta ttatcggctc gctgctgctt cccgaaaccc gccacgttcg
      961 aatctggcaa gaagtgaagg aatgagaccg cgtaaaggac gcgttgaact gttcagaata
     1021 atggttatgc tttgtagtta tacggacgtt gaagtgtcag acgccggcaa ccgttaaagc
     1081 taacactcga acttctgaca cgattcccaa aaccaaaagg agaaacaatt atgtcagtca
     1141 aaccaattcc cgagggttat cattcggtga caccttactt gattctgcgt ggtggcggtg
     1201 cggcgatcga gtactaccag aaagcgttcg gcgcggttga gctgtttcgc atccccgcgc
     1261 ccggcggaac ggttggccac gctgaaatca agattggcga ctcgatcatc atgctcgccg
     1321 acgaacatcc ggacatgggt tataacgggc cggaaacgat cggcggttcg gccgtgagtc
     1381 taatgattta cgtcgaagac gttgacacag tatttgagcg tgcggttact gcgggcgcca
     1441 cggtgaagca agccctcgaa gacaagttct atggcgatcg gtcgggcacg atcgtggatc
     1501 cttttgggca tatctggcac atctcgaccc acaaagagga cgttcccgcg gaagagatgg
     1561 agcgccgcgc gaaagaacac agtgcggcgg catcgggcgg cggccagtaa ctttgcctaa
     1621 ggtggcacgc gcatcttgcg cgtgagttca cgggcgggac gcccgtgcca catttagacc
     1681 gaagtaactt tgcctaacta atcaagccgg tgtagattct tcagccgagg taaacatgaa
     1741 gccaagaatc tacaccgcac ttttcctgac gctgctcctg tctggagcgg cttgctccag
     1801 tagcgcaaac cgaaccacga atcagcagcc tggcgcgccg gcgtccggcg aactacgatt
     1861 caaagctccc gacggttgga tcaccgagaa gacaacttcc actatgcgcg tcgcgcagta
     1921 caagctgccg aaggcggacg gggatgcgga ggatgcttca ctcgtgctgt actatttcgg
     1981 cgccgcgcag ggcggttcga cgcaggcaaa cgttgagcgc tggatcaatc aactc
//
LOCUS       DATDBY010000042         2149 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1421468, whole genome shotgun sequence.
ACCESSION   DATDBY010000042 DATDBY010000000
VERSION     DATDBY010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1421468"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VIT19_00870"
     CDS             complement(<1..222)
                     /locus_tag="VIT19_00870"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5837553.1"
                     /translation="MESNIEKSGVAVNALKAHLALNVNDVTESIEFYRKLFGIEPSKV
                     RTGYAKFDVQNPPLNFTLNQGSVPNRGALS"
     gene            306..806
                     /locus_tag="VIT19_00875"
     CDS             306..806
                     /locus_tag="VIT19_00875"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5837554.1"
                     /translation="MSEAVIESMAADDWLAVRAVYREGIATGDATFETEAPSWEEWDA
                     AHLSFARLVARDGEEVIGWAALSPVSQRKAYLGVAEVSVYVAAHSRGKGLGRALLERL
                     IQESEQNRIWTLQATVFPENAATIALHEGFGFREVGRRERISKLNGNWRDTILLERRS
                     EIVGVA"
     gene            858..1247
                     /locus_tag="VIT19_00880"
     CDS             858..1247
                     /locus_tag="VIT19_00880"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEY5837555.1"
                     /translation="MSKNYDIEDLFKALADRTRLRLISLIGDSEVCVCFLVAILKTSQ
                     PKISRHLAYLRRAQIVDARREGKWMHYRLIDPPDDHAARIFREVRASLVDLPELQRDR
                     EKLMQICCAPQLPVQLRHAPKPIEVVA"
     gene            1259..1675
                     /locus_tag="VIT19_00885"
     CDS             1259..1675
                     /locus_tag="VIT19_00885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837556.1"
                     /translation="MTALEHNKYLSIGFGIFAALFGLTFLLLMFVTLGVFVALGISFA
                     NETGDANQAGIGVLGGVFTVVFYVVLGLLLVLPPATASRKLWKLRRGARGWGIIAAIL
                     VFWAFPVGTFLAIYALWFLFSTEGRKLYAGVRPTLP"
     gene            1729..1819
                     /locus_tag="VIT19_00890"
     tRNA            1729..1819
                     /locus_tag="VIT19_00890"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1763..1765,aa:Ser,seq:gct)
     gene            1919..>2149
                     /locus_tag="VIT19_00895"
     CDS             1919..>2149
                     /locus_tag="VIT19_00895"
                     /inference="COORDINATES: protein motif:HMM:NF012951.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HEY5837557.1"
                     /translation="MTTRVRFAPSPTGYLHIGAARSALFNWLYARKTGGKFLLRVEDT
                     DLQRSTEESTQSIIEGLKWLELDYDEEIIFQSD"
BASE COUNT          441 a          558 c          627 g          523 t
ORIGIN      
        1 cgacagggcg ccgcgattcg gcacgctgcc ctggttcaaa gtgaagttca gcggcggatt
       61 ctgcacgtcg aatttcgcgt atccggtgcg aaccttgctt ggctcaatcc caaacaattt
      121 acgataaaac tctatgcttt ccgtcacatc gttcacgttc agtgccaagt gagccttcag
      181 ggcgtttact gcgactccgc ttttttcaat gttgctttcc atctcaattc tcctttagaa
      241 tcatattcgc ctgtgcgaat gtgtggcgat aataacgggg gctggatata tctgtcaagc
      301 cgaatatgag cgaggccgtc attgagtcga tggccgctga cgattggctc gcggtgcggg
      361 ccgtataccg ggagggaatt gcgacaggcg acgcgacctt tgaaacggaa gcgccctcgt
      421 gggaggaatg ggacgcggcg cacttatcgt ttgctcggct ggtagcgcgc gacggtgaag
      481 aggtgatcgg ctgggccgcg ttgagtcctg tatctcaacg aaaagcctat ttgggcgtag
      541 ccgaagtcag tgtctatgtt gctgcgcaca gccgcggcaa gggacttggt agagctttgc
      601 ttgagcgact gattcaggaa tccgagcaga acaggatttg gactctgcaa gcgaccgtat
      661 ttccggaaaa cgccgcgacg attgcgctcc acgagggctt tggttttcgc gaagttggaa
      721 ggcgagagcg gattagtaag ctaaatggta actggcgcga tacgattctg ctcgagcgac
      781 gcagtgaaat agttggagtc gcttgaggca aacctgagtt agaggcgggc tactgccctc
      841 gagttggtgt ggataaaatg agcaagaatt acgacattga agaccttttt aaggcgttgg
      901 cggatcgcac gcgtctgcgg ctgatcagtt tgattggcga ttcggaagtg tgtgtctgtt
      961 ttttggtagc gattcttaag accagccagc cgaagatttc gcggcacctc gcatacctgc
     1021 gccgggcgca gattgttgat gcacggcgcg aaggaaaatg gatgcactac cgcctgatcg
     1081 atccacctga cgaccacgcc gctcgtattt tccgcgaagt gcgcgcatcg cttgtcgacc
     1141 ttcctgagtt gcagcgcgac cgggagaagc tcatgcagat ctgctgcgcg ccccagcttc
     1201 ccgtgcaact gcgacacgcg ccaaaaccga tcgaagtcgt ggcctagctc gctctcccat
     1261 gaccgctctt gaacacaaca aatacctgtc cataggcttt ggcatattcg cggctttatt
     1321 cggcctcaca ttcttgctcc tgatgttcgt taccctcggg gtgttcgtcg cgttgggtat
     1381 ttctttcgcg aacgaaactg gcgatgcgaa tcaggccggt atcggagttt tgggcggcgt
     1441 atttaccgtt gtcttttatg tagtccttgg cttgctgctc gtgttgccgc ccgccaccgc
     1501 gagccgcaag ctctggaaat tgcggcgcgg cgcgcggggc tggggcatca tcgccgcaat
     1561 cctggtcttc tgggcttttc cagtaggaac gttcctggcg atttacgcgc tgtggttttt
     1621 attcagcaca gaaggccgga aattatacgc cggcgtaagg ccgaccctgc cgtgacttac
     1681 cttgactttg cttcttcgcg ccttagaata acttttcacg gatcgcgcgg agatgtggcc
     1741 gagtggctga aggcggcggt ttgctaaacc gttataggtc aaaagcctat cgcaggttcg
     1801 aatcctgcca tctccgccag aaaggcagag gtcagaggtc ggagggtcag aggtcagaaa
     1861 aaagacggat cgcgcgtctt tgctgacttc tgacatctga cttctgacct ctaattctat
     1921 gacgaccaga gttcgctttg ccccgtcacc aaccggctat ctgcacatcg gcgcggcgcg
     1981 ttcggcgctg ttcaattggc tctatgcgcg caagaccggc ggcaagtttc tgctgcgcgt
     2041 agaagacacc gatctccagc gctcaacaga agaatcgacg cagtcgatta tcgaaggctt
     2101 gaagtggctt gagctggatt acgacgaaga gatcattttt cagtcagac
//
LOCUS       DATDBY010000043         3249 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1783756, whole genome shotgun sequence.
ACCESSION   DATDBY010000043 DATDBY010000000
VERSION     DATDBY010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3249
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1783756"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..945)
                     /locus_tag="VIT19_00900"
     CDS             complement(<1..945)
                     /locus_tag="VIT19_00900"
                     /inference="COORDINATES: protein motif:HMM:NF014919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEY5837558.1"
                     /translation="MVSKKPKQLSENKLPPKRRATPTVREEADLKTKTSSRKVAKTKS
                     SATEFPPILSDLDLHLFGEGKHHRIYEKLGAHVMSHGGKRGVTFAVWAPAADRVSLVG
                     NFNSWDVTKHPMRRLGTSGVWELFIPGLRAGELYKYVINTAGHEFFKADPYAFMMEVP
                     PDTSSVVFTSNYKFRDHAWIAKRTRREAWREPLAIYEVHLGSWRRIAEENNRPLTYRE
                     LAPVLADYVIENGFTHVEFLPLKEHPYGPSWGYQVSAFYAPSSRYGTPDDFRFLVDHL
                     HKAGVGVIMDWVPAHFPKDAFALGRFDGTALYEHLDPRK"
     gene            complement(1096..2685)
                     /locus_tag="VIT19_00905"
     CDS             complement(1096..2685)
                     /locus_tag="VIT19_00905"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3536 domain-containing protein"
                     /protein_id="HEY5837559.1"
                     /translation="MEIPNPTPDSQPPTPSLIVHGHFYQPPRENPWTGVIEAQPSAAP
                     FHDWNERIQAECYQPNSSAVISDPVTGEPRAVNNYESISFNFGPTLLSWIEQNHPETY
                     NRIIDADRASVLTRQGHGNAIAQAYGHAILPLCNERDLTTQIRWGLADFRHRFGREAE
                     AMWLPETACNDRVLEALIDEGLRYVVLAPHQAALVRTGSGSDRVQDSTNDRHSVVAEN
                     LDISLPYRYTHSHDAGKSIAVFFYHGPLSRAIAFEGLLRSSGALVDSFVQAVRGNELL
                     HLATDGETYGHHFKFGDLCLAHALTVEAPARGFKITNYGEYLDQHSPQHEVEINNGSD
                     GQGTSWSCQHGVGRWIRDCGCVTGGEPGWNQKWRTPLRDALDFLRDENISHFKATRGD
                     LFTFPWLARDDSISLILNPHQSREQFLFEHAGRWLSADEQSRSLAYLELQRMLLLMYT
                     SCGWFFNDIFGIETIQILGYAARAMDLMRQLNLPSVRERFLEILSEAKSNRPELGTGA
                     DIFRRFVEPSSRELRQETILI"
     gene            complement(2747..>3249)
                     /locus_tag="VIT19_00910"
     CDS             complement(2747..>3249)
                     /locus_tag="VIT19_00910"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEY5837560.1"
                     /translation="LWRGADGTAGEIGHASVHPFGRVRCKCGNIGCLEVYASATAIVR
                     MTLDALSNHPASQLNSVAESALTARQVADAAARGDELALEIFRKMGTYLGVAAGNIVN
                     TLNPEMIVIGGGVSAAFDLFAQTAREEMARRAFPVPAARCQIVKAECGDDAGLLGAAW
                     LALARV"
BASE COUNT          698 a          938 c          918 g          695 t
ORIGIN      
        1 cttgcgcgga tcgagatgct cgtaaagcgc ggtgccgtca aagcgcccca gcgcgaatgc
       61 gtctttcgga aaatgcgccg gcacccaatc catgatcacg ccgacgcccg ctttgtgaag
      121 atggtcgacg aggaaacgaa agtcgtccgg cgtgccgtaa cgtgatgacg gagcgtagaa
      181 cgcactgact tgataacccc acgaagggcc gtagggatgt tcttttagcg gcagaaattc
      241 gacgtgggta aacccattct cgatcacata gtcagcgagt actggcgcca gttcgcgata
      301 tgtcagcggc cggttatttt cttcagcgat tcgccgccac gagccaagat ggacttcgta
      361 gatcgccaac ggttcgcgcc aggcctctcg cctggtgcgt ttagcgatcc atgcgtggtc
      421 gcggaatttg tagtttgatg tgaaaacaac cgacgaagtg tcgggcggga cttccatcat
      481 gaaggcgtac ggatcggctt taaagaactc atggccggca gtgttgatga cgtatttgta
      541 gagttcgccg gcgcgcaaac cggggatgaa gagctcccac actcccgacg ttcccaggcg
      601 gcgcatcgga tgtttcgtga cgtcccagga gttgaagttg ccgacaagac tgacccggtc
      661 cgctgcgggg gcccagacgg cgaacgtgac gccgcgcttg ccgccgtgtg acatgacatg
      721 cgcgcccagc ttttcgtaaa tccggtggtg cttgccttcg ccgaacaggt gaaggtcgag
      781 atcgctaaga atgggtggga attccgtggc ggagctcttc gtctttgcga ctttgcgtga
      841 agatgttttc gtttttaagt cggcctcctc ccgaacggtc ggggtagcgc gccgtttggg
      901 cggaagcttg ttttcactca gctgttttgg cttcttcgac accattttct gtcgcccgct
      961 aaagcgggct gagtatcaaa actaaccggt ccccgggttc tcccgaccca tcgggactcc
     1021 acccggggct actatctgcc gccagcttcg ctggctcgtt gagtgctgcc gccacggctg
     1081 cgctccattc cacgatcaga tcaaaatggt ctcttggcgt agttcgcggc tggatggctc
     1141 aacaaatcgg cgaaagatgt ccgcgcccgt gccgagctct ggccgattgc tctttgcttc
     1201 cgaaagaatt tccagaaacc gttcccgcac ggacggcaga ttcaattgcc tcatcaaatc
     1261 catggcccgc gcggcgtagc ccaggatttg aatcgtttcg atcccgaata tgtcgttgaa
     1321 gaaccaaccg cagctcgtgt acatcaacaa cagcatccgc tgcagctcga gataagcgag
     1381 cgagcgcgat tgttcatcgg cagataacca tcgtccggcg tgttcaaaca aaaactgttc
     1441 gcgtgactga tgcggattga gaataagcga gatgctatca tcgcgcgcca gccacggaaa
     1501 cgtgaacagg tcgccgcgtg ttgccttaaa gtgcgatatg ttttcgtcgc gaagaaagtc
     1561 gagcgcatca cgcagaggcg ttcgccattt ctgattccac cccggctcgc ctccggttac
     1621 gcacccacaa tcacgaatcc aacgtcctac gccgtgctga caactccacg aagtgccctg
     1681 gccatccgat ccgttgttga tctccacctc gtgctggggc gaatgctggt cgagatactc
     1741 gccatagttc gttattttga aaccgcgggc cggagcttcg actgtaagtg cgtgcgccag
     1801 acacaaatcc ccgaacttaa agtgatgtcc gtaagtctcg ccgtcggtgg cgagatgcag
     1861 taattcgtta ccgcgcacgg cttgaacgaa tgaatcgacg agggcaccgc tcgatcgcag
     1921 caaaccttca aacgcaatcg cgcgcgaaag gggcccgtga tagaagaaga cagcgatcga
     1981 tttaccggca tcgtgggaat gcgtgtagcg gtaagggagg cttatatcga ggttctccgc
     2041 gacgactgaa tgcctgtcat tagttgagtc ttgtacccgg tcgctaccgc tcccggtacg
     2101 gaccagagca gcttgatgcg gcgcgagcac tacgtagcgc aaaccttcat cgatcagcgc
     2161 ctcgagcacg cggtcgttgc aagccgtttc gggcagccac attgcttctg cttcacgccc
     2221 aaaccgatga cgaaaatcgg cgagacccca gcgaatttgc gtggtcaggt cgcgctcgtt
     2281 acacaaaggc aaaatcgcgt ggccgtacgc ctgcgcaatc gcgttaccgt ggccttgacg
     2341 agtcaaaaca cttgcgcgat ccgcgtcaat aattcggttg taggtttccg gatgattctg
     2401 ctcgatccaa ctgagcaacg tcggcccaaa gttgaaactg atgctctcgt agttgttaac
     2461 cgcgcgcggc tcgcccgtca caggatctga aattaccgcg gaggaattcg gctgatagca
     2521 ttcggcttga atgcgttcgt tccaatcatg gaaaggcgca gcgctgggtt gtgcctcgat
     2581 gacgcccgtc cagggatttt cccgcggggg ttggtagaag tgaccatgga cgatcagaga
     2641 gggtgtcggg ggttggctgt cgggtgtcgg gtttggaatt tccattaaca gttgatcaga
     2701 accttcaatt aagcccgtaa gactcctaaa ccctacaccc aaccccctac accctcgcaa
     2761 gtgccagcca agctgcgccc agcaagcccg catcgtcacc acattcggct tttacaatct
     2821 gacaacgcgc ggccgggaca ggaaaggcgc gccgggccat ttcttcccgt gcggtttgag
     2881 caaataggtc gaacgcagct gagaccccac cgccgatgac aatcatttcc ggattcagcg
     2941 tattgacaat gttccccgcc gcgacgccga gataagttcc cattttgcga aatatctcga
     3001 gagcgagctc atcgcccctg gcagcggcat ctgctacttg acgagccgtt aaggcgcttt
     3061 cggcaaccga attcaattgc gaggccggat ggttagaaag cgcatccaga gtcatacgca
     3121 caatcgccgt tgcggaggca taaacctcca ggcagccgat gttgccgcac ttgcaccgga
     3181 cgcggccgaa agggtgaacg ctcgcgtggc caatctcacc tgctgtccca tccgcgccgc
     3241 gccacaagt
//
LOCUS       DATDBY010000044         3155 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_3002349, whole genome shotgun sequence.
ACCESSION   DATDBY010000044 DATDBY010000000
VERSION     DATDBY010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3155
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3002349"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2448
                     /locus_tag="VIT19_00915"
     CDS             <1..2448
                     /locus_tag="VIT19_00915"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEY5837561.1"
                     /translation="LDIDAETQENDVEMRAFASEANDYDLAPNSRRLVVSVHGELFTV
                     PVEEGDIRQLTDSPARDRFVDYSPDGKSVAFVSDRSGREELYVAPIDGAAEALKLTDI
                     DALKSGYNWSPDSKEIAFTSSDSKLRKVNVATKQIVEVDASRFGNISTPEWSPDGKWL
                     AYSKSDASRTTDIYVIASSGAEKEAHKVTFDSYDERTPRFSPDGRKLFFIRSDAIGGA
                     QGATNPSVQIYSVGLEKLDRDPDDPEERAEAESPQPGAGEGGEGPGPQRRPMGPRPPH
                     ETKMDWAGMKRRTRQITRMPFPISQFTVAPDSRTLIFVTSEPSATASLPVVYSIQDDG
                     RRLTRVASGAPPQGDGDGPPGGGGGFGGGISNLNVSRDGRTLFFSERDGIYSVPLAAG
                     AASAATAGRGPSTGGGDAARRRINFNVRVKINRPDEWAEMFGDAWRTMKYRFYDTAMH
                     GTDWNAMKAKYEPLVQYVGDRQELLNIINEMIGELNASHTGAGAPPRGPGGGGVSTGN
                     LGIELEPDASAGRYRVNYIYENGPADKDWVKVKVGDYLIAIGGKPVKAGDNYWELLNN
                     RLNRKIEVTFNSKASEEGAWKTRMETTSTQGFGQLRYDRWVKERRQKVDELSNGRIGY
                     VHIQAMNQPSLRKFEKEIREFRNKEALIIDQRWNGGGNIEQELLAILVQRQYQVWQPR
                     GVEAAGRPFAGYFGPKVVLQNWRSASNAEMFPAGFRALGLGKVIGTPTMGAVIGTGSY
                     SLIDGSTVRTPGVGVYLADAKRTNMENYGVQPDILVDNPPADNLAGRDRQLEVAVEDL
                     LKQLGATRRNIATKEQQ"
     gene            complement(2795..>3155)
                     /locus_tag="VIT19_00920"
     CDS             complement(2795..>3155)
                     /locus_tag="VIT19_00920"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5837562.1"
                     /translation="WAVVEKSTGEFIGFGGLRSLFGTPEVVYHLTKAHWGKGYATELA
                     RAALRFGFQERGFDRIVAITKPQNAGSIHVMDKLGLRFEKHARYYEIDVVQYEINREE
                     FPSGEAAFKFLPDIQGE"
BASE COUNT          673 a          897 c          965 g          620 t
ORIGIN      
        1 ctcgacatcg atgccgagac ccaggagaac gacgtcgaga tgcgcgcgtt cgcttcggaa
       61 gcgaatgact acgacctcgc gccgaattcg cggcggctgg tcgtctcggt tcacggcgag
      121 ctgttcacgg tgccggttga agaaggcgac attcgccagt taactgacag tccggcgcgc
      181 gatcgtttcg tggattactc gcccgacggc aagtcggtgg ccttcgtttc ggatcgcagc
      241 ggccgggaag aattgtacgt ggcgccaatt gacggcgccg ccgaagcgct gaagctgact
      301 gacatcgacg cgttaaagtc cggttacaac tggtcgcccg attcgaaaga gattgcgttc
      361 acttcatccg acagcaagct gcgcaaagtg aacgtcgcga cgaaacagat tgtcgaagtc
      421 gatgcttcgc gcttcggcaa catctcgacg cctgagtggt ccccggacgg caagtggctc
      481 gcgtactcga agtccgacgc gagtcgcacc accgacattt atgtaatcgc ctcttcaggt
      541 gcagagaagg aagcgcacaa ggtgacgttc gattcatatg acgagcgcac gccgcggttc
      601 agtcctgatg gccgcaaact gttcttcatt cgttccgacg cgatcggcgg cgcccaggga
      661 gccacgaacc cttcggtgca gatttattcc gtcggtttgg aaaaactcga tcgcgatcca
      721 gacgacccgg aagagcgcgc tgaagccgaa agcccacaac ccggcgccgg tgaaggcggc
      781 gaaggccccg ggcctcagcg tcgtccgatg ggtccgcgtc cgccacacga aacaaagatg
      841 gattgggccg gcatgaagcg gcgcacgcga caaatcacgc gtatgccctt cccgatttcg
      901 cagttcacgg tcgcgcctga cagccgcacg ctgatcttcg tgacgtctga accgtcggcg
      961 acggcgtcgc tgccagtcgt ctattcaatt caggacgacg gccggcgttt gacgcgcgtc
     1021 gcttccggcg ccccgccgca aggcgacggc gacggacctc cgggaggcgg tggtggcttc
     1081 ggcggcggca tctcgaattt gaacgtgtcg cgcgacggcc gcacgctctt cttcagtgaa
     1141 cgtgacggaa tctattcagt gccgctggct gcgggcgctg cgtcggccgc aactgccggc
     1201 cggggaccat cgacgggcgg tggcgatgcc gcgcgacgcc gcatcaactt taacgtgcgc
     1261 gtgaagatca atcgtcccga cgaatgggct gagatgtttg gcgacgcgtg gcgcaccatg
     1321 aagtaccgct tctacgacac ggccatgcat gggacggatt ggaacgccat gaaggctaag
     1381 tacgagccac tcgtgcagta cgtcggcgat cggcaggaac ttctgaacat catcaacgag
     1441 atgatcggtg agttgaatgc gtcacacacc ggcgccgggg cgccaccgcg tggtccggga
     1501 ggcggcggag tttcgaccgg caacctcggg attgaactcg agcccgatgc atcggccggc
     1561 cggtaccgcg tcaactacat ttacgaaaac ggtccggctg acaaggattg ggtgaaagtg
     1621 aaagtcggcg attacctgat cgcgatcggc ggcaaaccgg tcaaagccgg agacaactat
     1681 tgggaactgc tgaacaaccg tttgaatcgc aaaatcgaag tcacgttcaa cagcaaggct
     1741 tcggaagaag gcgcctggaa gacgcgcatg gaaacgacct cgacgcaggg attcggccaa
     1801 cttcgttacg accgttgggt gaaagagcgg cggcagaaag ttgatgagtt gtctaatggc
     1861 cgcatcggct acgttcacat tcaggcaatg aaccagccgt ctttgcggaa gttcgagaag
     1921 gagattcgcg aattccgaaa caaggaagcg ctgatcatcg atcagcgttg gaatggcggc
     1981 ggcaacatcg aacaggagct gcttgccatt ctcgtgcagc ggcagtatca ggtctggcaa
     2041 ccgcgcggcg tcgaagccgc cggtcgtccc ttcgccggat acttcgggcc aaaggtcgtt
     2101 ttgcaaaact ggcgctcggc ttcgaatgcc gagatgtttc cggcaggttt ccgcgcgttg
     2161 ggcttaggca aagtgatcgg cacgcccacc atgggcgcgg tgatcggcac gggcagctat
     2221 agcttgattg acggttcgac cgtgcgcaca cctggcgtcg gtgtctacct ggcggatgcg
     2281 aaacgcacga acatggaaaa ctatggcgtg cagcctgaca tcctggtgga caatcccccg
     2341 gcagacaatc tggccggccg cgatcgccaa ctggaagttg cggttgaaga tctgttgaag
     2401 cagctcggag ctaccaggcg gaatatcgcg accaaggaac agcagtaaag cgataccgat
     2461 tgattcggga ttgcgctcaa gatttcatct tgcgtttacg agaggcggga cttgtcccgc
     2521 ctctattttc ttgatgtcct ggcggttggg tcagggcgtt ttccgtgtgc gactttgtcg
     2581 cctcgctgtg cggaaggacc gcgtcttcgc tccgtcaaga gcaagatgtt tatagccggg
     2641 tgtggacgag atcatttcgc tcctttagga gcgaatattc aggctgggtt ttgggactat
     2701 aaatattcgg cccctaacgg agctgacgaa tatgggcttt tccttacagc gaggtggcaa
     2761 actcgcaaaa cggcaccgtg atattgccag atagtcactc accctgaata tcaggcaaga
     2821 acttgaatgc ggcttcacca gacgggaatt cctcgcggtt aatctcgtat tgcactacat
     2881 cgatctcgta gtaacgcgcg tgcttctcga agcgcaggcc aagtttgtcc atcacatgta
     2941 tcgagcccgc gttctgcggc ttggtaatcg ccacgattcg atcaaaacca cgctcctgaa
     3001 atccgaaccg cagcgccgcg cgggccaact cagtcgcgta gccttttccc caatgcgctt
     3061 tggtgaggtg gtaaacgacc tccggtgtgc cgaagagcga acgcaatccg ccgaagccga
     3121 tgaactcgcc agtgcttttt tccaccacgg cccag
//
LOCUS       DATDBY010000045         3590 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1359169, whole genome shotgun sequence.
ACCESSION   DATDBY010000045 DATDBY010000000
VERSION     DATDBY010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3590
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1359169"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>3590
                     /locus_tag="VIT19_00925"
     CDS             <1..>3590
                     /locus_tag="VIT19_00925"
                     /inference="COORDINATES: protein motif:HMM:TIGR03607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="patatin-like protein"
                     /protein_id="HEY5837563.1"
                     /translation="PNVDYKKEIRFAVVMYGGVSLAIYINGVAQELLRMVKATAPRGE
                     GEDVARDLGTTGDKPCGTEAVYRKLSYLIDDLNLRAELRSKLVADKKAITNWQPDGDI
                     TVRFMVDVLAGTSAGGINSIYLAKALANDQDIDELKNLWVTEGDIHLLINDSKSLNDT
                     TLARQKPPQSLLNSRRLYLKLLAALDAMDARPKEKHSPLVDELDLYITATDIRGLALP
                     IRLADAVVFERRHKNVFRFKYMTREATGSDVNEFRKQLNPFLAFAARTTSSFPFAFEP
                     VRLSDIRDLLDHSEEHRAVKDNFKPDSPLIRRFFQDNLTQDVEFGSVNYDLRSFADGG
                     YLDNKPFSYATSTLTRRTPTVPVDRKLIYVEPSPEHPEREVQSNEPPDAIQNVMAALD
                     LPRYETIREDIQAVLDRNRLIERVNRLTQVIERDIETYENRVEQFSSKMEGVTDPTER
                     AELRKKEELNLLSTTVKAVLKDPDKQEEFAKQMRKNRPEVPPELWDAMQLSDMVGLYG
                     LHYLPYRRLRMSALTDEIATLTARMVDVDERSAMFQAVRALVQTWRDETYSDDEPKEG
                     TSNRFLNRFDLSYRLRRLNFLVAKVDELLSLFDWHGKGDVFESKTAKRLVQKLDKAWN
                     DLLSKNPGKGKPMDFDFVGMKGTAERQQAIRFLLYLKCELNQSFIELRKFGRDLRRSP
                     GKTTDIQPSQTAVHSMAATFDPEGEKRYQEINEYKQKVRDIGLTVEHLKLVLGATARN
                     QRIELEGAATACLGEDEALLRAQALWDQCDKYGLAGLPERFKAAGVHLEKILGSVFVP
                     SRARSRQLLDPQGETYESHPRCAEKEGANYFTEPFAVAIRGYLWHHYEHFDDYDQISF
                     PIYFDTDHGESDVVEIIRISPEDAPSLINEKTDVRGRKKLAGTQLANFGAFLDAAWRV
                     NDIMWGRLDGAERLIKSMLPDEGDTDIRDALTREAHQTILAEELSPAAQADLANLLGE
                     ALVQRRAGVSVSDAIDKILKPVDNEVVKQRLASVMTTCLQGDELYAFIRDHYEVNRKF
                     EPEPTLRVLGRATRVIGYILDDISKKNNLENKSTKWISRVGQIFMGLVEVAVPDSLAS
                     LLFRHWLKLLYALEVVLLVLATVVISTPEVVSFAWKLLALTLATNFAVLVLRDYMRGK
                     NRWIRLGKLAAVAVVIALVLVGIQDIRGKNWSGKVVGAWEAVTKSVASIS"
BASE COUNT          835 a          943 c         1061 g          751 t
ORIGIN      
        1 ccccaatgtc gactacaaga aagaaattcg cttcgccgta gtcatgtacg gcggtgtgtc
       61 gctcgcaatc tatatcaacg gggtggcgca ggaacttttg cgcatggtta aggcaaccgc
      121 gccgcgcggc gagggggaag acgtcgctcg agatctggga acgaccggcg acaagccgtg
      181 cggaaccgaa gcggtctatc gcaagctgag ttatctgatt gacgatctca atcttcgcgc
      241 ggaacttaga agcaagctgg tcgccgataa gaaggccatc accaactggc agccggatgg
      301 cgacattacc gtgcggttta tggttgacgt gttggcgggc acctcagccg gcggcatcaa
      361 ctcgatctac ctggcaaagg ccctggcgaa tgaccaggac atcgacgagc tcaagaatct
      421 atgggtcacc gagggtgaca ttcacctgct gattaacgac tcaaagtcgt tgaacgacac
      481 gacgcttgcc cggcaaaagc cccctcagtc cttgctgaac agccggcgac tgtatctgaa
      541 gctgttggcc gccctcgacg cgatggatgc gcggccgaag gaaaaacatt cgccgctggt
      601 ggacgagctc gacctttaca tcacggcgac agatattcgc ggattagccc tgcccattcg
      661 cctggctgac gcggtggttt ttgagcggcg tcataagaac gtgtttcggt tcaagtacat
      721 gacgcgcgag gctacgggca gtgatgttaa cgagtttcga aaacaactga acccatttct
      781 ggcgtttgcg gcgcggacca cttcgtcgtt cccgtttgcc tttgagccgg tccgcctctc
      841 ggacattcgt gacctgcttg accactctga agaacatcgc gcggtgaagg acaatttcaa
      901 acctgactcg ccgctaattc gcaggttctt tcaggacaac ctgactcagg acgtggagtt
      961 tgggtcggtg aactatgact tgcggtcgtt tgccgacggg ggctatctgg acaacaagcc
     1021 attcagctac gcgaccagca cgctcacgag gcgcactccc accgtgcccg tggatcgcaa
     1081 actgatttat gtcgagccct cgccggaaca ccccgagcgc gaggtgcaat cgaatgagcc
     1141 gcccgatgcg attcagaatg tcatggcggc gctcgacctg ccgcgttatg aaaccatccg
     1201 cgaagacatt caggcggtgc ttgatcgcaa ccggctgatc gaacgcgtca atcgcctgac
     1261 ccaggttatc gagcgcgaca tcgagactta tgaaaatcga gtggagcagt tctcgtcgaa
     1321 aatggagggg gtgacagacc ccacggaacg agcggaactc aggaaaaaag aggagctcaa
     1381 ccttctgtcg acgacagtaa aggccgttct caaagatccg gacaaacaag aagagttcgc
     1441 caaacagatg cggaagaatc ggccggaggt gccacccgag ctttgggacg ccatgcaact
     1501 gtccgacatg gtaggcctgt acgggcttca ctatcttccc tatcgccggc tgcgaatgtc
     1561 ggctttgacg gatgaaattg cgacgctcac cgcgcggatg gtcgacgtgg acgagcgttc
     1621 agcaatgttt caggcggtgc gcgcgttggt gcaaacctgg cgcgacgaaa cctattccga
     1681 cgacgaacct aaagagggca cttcgaaccg tttcctgaac cgatttgatt tgagctaccg
     1741 gctcaggcgg ctgaatttcc tggtggcgaa ggttgacgag ctcttgtccc tgtttgattg
     1801 gcatggaaaa ggggacgtgt ttgagtcgaa gacggccaaa cgtctagtgc agaaactcga
     1861 caaggcatgg aacgatcttc tcagcaagaa ccctggcaaa gggaaaccca tggatttcga
     1921 ttttgtcgga atgaaaggga ccgcggaacg acaacaggcc attaggtttc tgctgtacct
     1981 gaaatgtgaa ctgaatcaat cgttcattga actccgaaaa ttcgggcgcg acctgcgccg
     2041 atcgccggga aagacaactg acatccagcc gtcacaaacg gcggttcact cgatggcagc
     2101 caccttcgat ccggagggcg aaaaaagata tcaggagatt aacgagtaca aacaaaaagt
     2161 ccgtgatatc ggtttaactg tcgaacatct gaaattagtt ctgggagcga ccgcccgcaa
     2221 ccaacgaatc gagttggaag gcgccgcgac ggcttgcctg ggtgaggacg aggcgctatt
     2281 gcgagcgcaa gcgctttggg accagtgcga taagtacggt ctggcaggtc tgcctgagcg
     2341 gtttaaggct gccggagtac atcttgagaa aattcttggt tcggtctttg ttccaagtcg
     2401 cgcgcgttcc cggcaattgc tcgacccaca gggagaaacc tatgaatcgc acccgcgctg
     2461 cgctgagaag gaaggcgcta attacttcac cgagccattt gcggtagcca tccgcgggta
     2521 tttgtggcac cactacgaac actttgacga ttacgatcag attagctttc cgatctactt
     2581 cgacaccgat cacggcgaat cggacgttgt tgaaatcatc cgtatcagtc cggaagacgc
     2641 gccgagtttg ataaacgaaa agaccgacgt gcgcggccgc aagaaactgg ccggcacgca
     2701 actggcgaac tttggcgcgt ttctggatgc ggcctggcgc gtgaacgaca ttatgtgggg
     2761 gcgcctcgac ggcgccgagc ggctgattaa gtcgatgctg ccggatgaag gggacacgga
     2821 catccgcgac gcgctcacgc gcgaagctca tcagacgatt ctcgccgaag aactttcgcc
     2881 ggcagcacag gccgacctgg cgaatctgct gggcgaggcg ctggtgcaac gcagggccgg
     2941 cgtcagcgtt tcggacgcga tcgacaagat tctcaagccg gtcgataacg aagtcgtaaa
     3001 gcaacgcctg gcgagcgtca tgacgacttg tctgcagggc gacgaactgt atgcgttcat
     3061 tcgcgaccac tacgaagtga atcgcaagtt cgagcccgag ccaaccttga gagttttagg
     3121 gcgggcaact cgcgtcattg gctatatcct cgatgacatt tcgaagaaga acaatctcga
     3181 aaataaatct acgaaatgga tttccagggt cggccaaatt tttatggggc tggttgaggt
     3241 ggccgtgccc gacagtctgg cgtctctgtt gttccggcat tggctgaaac tgctttatgc
     3301 gttggaggtg gtgctgctgg tcctcgcgac cgtcgtaatt tcgacgccgg aagtagtgag
     3361 ctttgcatgg aagttactgg cgctgactct agctacgaac ttcgccgttt tggttttgcg
     3421 cgattacatg cgcggcaaga atcggtggat ccgtttggga aaacttgcag cagttgccgt
     3481 tgtaattgcc ctggttctgg tcggtattca agacatccga ggcaagaatt ggtctggcaa
     3541 ggtcgtgggc gcatgggagg cagtcacgaa gtcggtcgct tctattagtg
//
LOCUS       DATDBY010000046         2451 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_3001738, whole genome shotgun sequence.
ACCESSION   DATDBY010000046 DATDBY010000000
VERSION     DATDBY010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3001738"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..569)
                     /locus_tag="VIT19_00930"
     CDS             complement(51..569)
                     /locus_tag="VIT19_00930"
                     /inference="COORDINATES: protein motif:HMM:NF021384.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2085 domain-containing protein"
                     /protein_id="HEY5837564.1"
                     /translation="MIASPSPGETFTTRDSRIVLVVWSLLASVALLIVVTTVAAPVAL
                     SRGHAGFSEVIYQAFSYLCHQIPERSFHLAGHPFAVCSRCTGLYAGFAFATLALPLAR
                     SLKRTDTPHVIWLLLSGVPLAIDFGLTYFEIWENNHFTRVTTGALFGAVAAIYVVPGL
                     IELASKAAGRLR"
     gene            complement(588..1637)
                     /gene="glpX"
                     /locus_tag="VIT19_00935"
     CDS             complement(588..1637)
                     /gene="glpX"
                     /locus_tag="VIT19_00935"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR00330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HEY5837565.1"
                     /translation="MAPELRTERELSLDFLRVTEAAAIAAARTMGQGDRKYSDQVAVE
                     AMREVMDTVPMRGRVVIGEGERDEAPMLFIGEEVGGGFGVGEEMAASCPEVDIAVDPL
                     EGTNLCALGANNAIAVLAAAERGGLLHAPDIYMDKIVVGPSSRGVVDIDAPIKENLRN
                     IARRLGRDIDDLTIIILDRKRHKKIIDDVREAGARIRLISDGDLSAGISAAVAGTNIH
                     ACIGIGGAPEGVLTAAAVKCLNGEIQARLVFDPERLGVDKSKVPPAAEVIARLKSMGV
                     TDPNKVYDTDDLAPGKKIIFAATGVTDGALMRGVRFFGSGKRTHSLVMTSESKHVRFV
                     DSIHIEGGPDTVIRF"
BASE COUNT          580 a          714 c          676 g          481 t
ORIGIN      
        1 cgggatcaaa acgcaagctg tgagtactgc tcttagtgtt ggcagtcgtt ctatcgcaac
       61 cgtcctgcgg ctttcgaagc gagttcaatc aatcccggca ccacataaat cgccgccacc
      121 gcgccaaaca acgcgcccgt cgtcacgcga gtgaagtggt tgttctccca aatctcgaaa
      181 tacgtcagcc cgaaatcgat ggcgagcggg acgcctgaca ataaaagcca gatcacgtgc
      241 ggcgtgtcgg ttcgtttcag tgagcgcgcc agaggcaacg cgagcgtcgc gaaagcgaat
      301 ccggcgtaca accccgtgca gcgagaacag acggcgaatg gatggccggc gagatgaaat
      361 gaacgctcgg gaatttgatg acagaggtaa ctgaaggcct ggtaaatgac ttctgagaat
      421 cccgcgtggc cgcgagacaa agccaccggt gcagcgacgg tagtgacgac gattagcaga
      481 gcaaccgaag cgagaaggct ccagacaacg agaacgatgc gtgagtcacg cgtggtgaaa
      541 gtttctccag ggctgggcga cgcgatcaaa aaccggaaat cccaaaacta aaatcgaatg
      601 accgtatccg ggccgccctc gatgtggatg ctgtcaacga agcgaacatg ttttgattcg
      661 ctggtcatca caagcgagtg agtgcgcttg ccggaaccaa agaagcgtac gccgcgcatc
      721 agcgcgccgt cggtgacacc ggtggccgcg aaaatgatct tcttgcccgg ggcgagatcg
      781 tccgtgtcgt aaaccttgtt cggatcggtc acccccatgg acttcaaacg cgcgatgact
      841 tcggcggccg gcggcacctt actcttatct acgccgagtc gttccggatc gaaaaccagg
      901 cgtgcctgaa tctcgccgtt aaggcacttc actgccgctg ctgttaacac gccttcgggc
      961 gcgccgccga ttccaatgca ggcatgaatg tttgtgccgg ccaccgcggc ggaaatgccg
     1021 gccgataagt cgccgtcaga gattaagcgg atccgggctc ccgcctcgcg cacgtcgtca
     1081 ataatctttt tgtggcgctt ccgatcgaga atgatgatcg tcaaatcgtc gatgtcgcga
     1141 cccagccgcc gcgcgatgtt gcgcagattt tctttgatgg gcgcgtcgat gtcgacgact
     1201 ccccgagatg aggggcccac gacgatcttg tccatgtaaa tgtccggggc gtgcaacaaa
     1261 ccaccgcgct cagcggcggc cagcacggcg atggcgttgt tcgctccgag ggcgcacagg
     1321 tttgttcctt ccagcggatc gacagcgata tccacttcgg gacaggacgc cgccatttct
     1381 tcaccgacgc caaagccgcc gccaacttcc tcgccgatga aaagcatggg cgcctcatcg
     1441 cgttcgcctt cgccaatcac gacacgcccg cgcatcggca ccgtgtccat gacttcgcgc
     1501 atggcctcaa ccgcgacctg atcggaatac ttgcgatccc cctggcccat cgtgcgggcc
     1561 gcggcaattg ccgccgcctc ggtcacacgc aaaaaatcca aagatagctc gcgctcggtt
     1621 ctcagttctg gcgccattct attcgctcct gtggcagacg aattgaaatg ctgaaacgaa
     1681 aggcggtacg cacgcctctg gcgtgcttgc atgccggagg catgcgtacc aaagagttaa
     1741 gaaagcgcgg acatagtacc agaggaatcg ttcgtgtcag aagccggagc gcagtcggta
     1801 atttgggtgt cgggatatta gattgatgcc aggttgctaa tttgctccgc cgccgcgggt
     1861 ccaaccagtt gtcatgcgcc aggtagttga gaagaatctt ttttcatccc gaatatttct
     1921 tgagccaacc aactcgagta ggtgatgaaa accccacagt acaatccgaa aaccagggcc
     1981 ttaccgagcc atgtgagaac cagaaaaacc gatataccgc cgaaaccaga tttccaaacg
     2041 tcccaagaaa actcagcgat taacgtccca agaaagaaga aaccagaatt ccaaagaaaa
     2101 atagcaaaga ggcggggcca acgcagactg cgcttcgcgt ttgattcgtc agtcttaacg
     2161 gttgaagttc gtaacggcgt ttcggacata gaaatatcat ccgcgaacga gattcttgcg
     2221 cataacttca gagttcaccg gccaggttag gcctgactct taacgtctaa tgatagacgc
     2281 aaagaaccgc aaagcatgtt gcgcttacag cgccccggcg ccgcgcgtct cgtgcgcttt
     2341 ccacggcggc agactcttcc gggcaggctt ttctttcttc aaacccagcg cccagtccgc
     2401 ctgcatcaac gtatgaatgt cacgcgtccc ttcgtagatg acggcggctt t
//
LOCUS       DATDBY010000047         4822 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1790629, whole genome shotgun sequence.
ACCESSION   DATDBY010000047 DATDBY010000000
VERSION     DATDBY010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4822
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1790629"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VIT19_00940"
     CDS             complement(<1..189)
                     /locus_tag="VIT19_00940"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY5837566.1"
                     /translation="MRRVYLDHSATTPVDPRVLAAMMPYLTENYGNASSVHQFGQQAR
                     AAVDKSRRQIASLIGARAN"
     gene            531..1520
                     /locus_tag="VIT19_00945"
     CDS             531..1520
                     /locus_tag="VIT19_00945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837567.1"
                     /translation="MKTRRISFSLFMALVLALPAVFASALAQDASQNQASALMRGYRT
                     GYSDGYPAGVQDSAKRAARDFRAKAEYQQADRAYSSTHGSLDEYRNGYRQGFETGYSA
                     GYDRRNFDSTIPDDLKIRDTSDDSQAPALTNPNQSDDNTPTPTNSASLIVIPGDTILR
                     VELLSNLATDASQKGDRFEVKVVEPAEFEGAVILGQLTRVQRPGKVKGTAELQLAFDQ
                     IRLRDGRSAQMSAQVIEVLPTGTSQGVGKVDQEGGVKGKDSTKGDVAKVGAATGIGAV
                     IGAIFGGGSGAAVGATIGAGVGTTGVMRERGKDIYLYTGQQLRIRTAGETEIQ"
     gene            1637..2449
                     /locus_tag="VIT19_00950"
     CDS             1637..2449
                     /locus_tag="VIT19_00950"
                     /inference="COORDINATES: protein motif:HMM:NF014003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent chlorinase/fluorinase"
                     /protein_id="HEY5837568.1"
                     /translation="MNPRMRVITLLTDFGAQDYFVGAMKGVILSLNPDATIVDITHEI
                     PPQDIQAAAFNLLACYQDFPAGTIHVAVVDPGVGSDRRAILVECANQFFIGPDNGLFS
                     WISEREGKFSAWQITNEQFFRNPVSSTFHGRDVFAPAAAALSNGLVAAEVGPPLENIV
                     MLAPLLPRTTTDAIEGSLIHIDRFGNCITNFTSEHINEERIAAGAKLIVNNNKITSIR
                     SFFADRSAPKNELFMLVGSAGFVEIAAQNASAAAIMSAKRGDSVLLVHDDCA"
     gene            2534..3682
                     /locus_tag="VIT19_00955"
     CDS             2534..3682
                     /locus_tag="VIT19_00955"
                     /inference="COORDINATES: protein motif:HMM:TIGR01800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEY5837569.1"
                     /translation="MDTAKQGGAVSAVATGLRGVIAAASSIGDVNGEKGELIYQGVNI
                     HDLATKSTFEEVVFLLWNGRLPKRDELDELRQSLAASYQIPESILELIKGFPADADPM
                     DSLRTAVSALALTDKDKRDLSRENSIKVATRLTAQFPTLVAAIDRARNGKVFVHPEPK
                     LDIATNFLYMLTGEMPDEFDAHALDVALILQADHELNASTFTARVVAGTLADMYSAVT
                     AAIGALSGPLHGGANTAIMKILLEIDDVNKVEGFVKDALSRKKKIMGFGHAVYKTEDP
                     RATHLRRFSKEMGERKGDSKWYDITAKLEEIMKREKGLLPNVDAYSASTYYMMGIPLD
                     LYTPIFAISRISGWTAHILEQYADNKLIRPRAEYVGPRDVTYVPIDER"
     gene            complement(3691..4281)
                     /locus_tag="VIT19_00960"
     CDS             complement(3691..4281)
                     /locus_tag="VIT19_00960"
                     /inference="COORDINATES: protein motif:HMM:NF045184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837570.1"
                     /translation="MSVPNLDTQLAFLESRGARSGQHSLSTLLDHLLGTRELLWQWQA
                     DEALCTAGLFHSVYGTDSFQLETVSLADRNLVRSVTGIDCEEIVYLFAVMTQESFAAN
                     LQRESGFRIKERTTGRWLPIRSKIFRQLCNLSAANWLEQRDRLPGQLRTAGRERYVPM
                     LKFLLPGAVDAICAAYNISRADNRLEIKRAVPAGDV"
     gene            complement(4294..>4822)
                     /locus_tag="VIT19_00965"
     CDS             complement(4294..>4822)
                     /locus_tag="VIT19_00965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837571.1"
                     /translation="YSSELVCDLKRVIQTIVLVPNIGDQERWSYNLRLAYFGAIFINP
                     FVVGCAGIAEALIHEYYHQRFWQWWAYDPPDGLPAEDQLITSPVTQRPKPARVMLQAF
                     VIYTAVHAFYETQLANHSARDHQTSKWIGDRTELLARAIVQLHERLREVVPEDTRAGA
                     MLDHVRQCSKPLVSA"
BASE COUNT         1118 a         1364 c         1339 g         1001 t
ORIGIN      
        1 gttcgcccga gcgccaatca acgaagcgat ttggcggcgc gatttgtcca cggcggcacg
       61 cgcttgttgg ccgaactggt gcacactgga ggcgttcccg taattctccg tcaggtacgg
      121 catcatcgcg gcgaggacac gcggatccac tggagtcgtg gcgctgtgat cgagatagac
      181 tcttcgcata ctgtcagttg tccgtagtca gtagtcagtt gtcggcgtaa tcaccgagct
      241 gaaaaatgac ggtgcaacag atgagaactt tacaacggac aactgacaac tgactacgga
      301 caaggccaca actgactacg gaccaccgac aactgacaac ggacagccat tttatagcat
      361 cagaacagcg atttcggcgg gctctgccgc agaatcaacg acgactgcag attgtcccgc
      421 ttgtcgtgcg atgttagcat tcgatcgaaa cggatgccga gacgtcggca ttcaaacaag
      481 tctctccctt tcaaactgcc cctatatttg cgggatgaaa ggtttagaaa atgaagacac
      541 gaagaatttc cttcagtctg tttatggcgc tggtgttggc gctgccggcc gttttcgcct
      601 cggccttggc ccaggacgca agccagaatc aggcgagcgc gctaatgcgc ggctatcgca
      661 ccggctactc tgatggctat ccggccggtg ttcaggattc cgcgaagcga gccgcacggg
      721 acttccgcgc gaaagctgag tatcagcagg ccgaccgcgc atattcatcc actcacggca
      781 gtttggacga gtatcgcaac ggataccggc aaggttttga gactggttac agcgcgggct
      841 atgaccgtcg aaactttgat tcaacgattc ccgacgattt gaaaattcgc gacacgagcg
      901 acgattcgca ggcgccggcg ttgacgaacc cgaatcagtc tgatgacaac accccgactc
      961 caaccaacag cgcgagcttg atcgtaattc cgggcgacac catcctgcgc gtcgagttgc
     1021 tttcgaacct ggcgaccgat gcgtcgcaaa aaggcgatcg cttcgaagtg aaggtcgtcg
     1081 agcccgccga atttgaaggc gcggtcatcc tcgggcagct cacgcgcgtg cagcggcccg
     1141 gcaaagtgaa ggggactgcg gaactccaac tagcattcga ccaaatccgt ttgcgcgacg
     1201 gtcggtctgc gcagatgagc gcgcaagtga tcgaagtgct gccaacaggc acaagccagg
     1261 gcgtcggcaa agtcgatcag gaaggcggcg taaaaggtaa agactcgacc aaaggcgacg
     1321 tcgctaaagt tggcgcggca accggaatcg gcgctgtcat cggcgccatc ttcggtggcg
     1381 ggagcggcgc tgccgtcggc gcgacgattg gtgcgggcgt cggcacgact ggcgttatgc
     1441 gcgagcgcgg caaagacatc tacctttaca ccggccagca actgcggatt cgcaccgcag
     1501 gcgaaacgga aattcaatag cccgaaatat ctgcgtgtca gaaccgcgag cggtagcgac
     1561 cggatcggaa agacaacttg caaaggtttg tcccggatct ggtcgctacc gctcgcggtt
     1621 ctgacacggg ctctccatga atccccgcat gcgcgtcatc actctgctta ccgacttcgg
     1681 agcgcaggac tatttcgtcg gcgcgatgaa gggagtgatt ctctcgctca atcctgacgc
     1741 gacgattgtt gacatcacac acgagattcc gccccaggat attcaagctg ccgcattcaa
     1801 tctgctcgct tgttaccagg actttcctgc gggaacaatt cacgtcgccg tggttgatcc
     1861 cggcgtcggc tcagatcgac gcgcaattct ggttgagtgt gcaaatcaat tttttattgg
     1921 tccggataac ggtttattca gctggataag tgagcgggaa gggaagttct ccgcctggca
     1981 gataacgaac gagcagttct ttcggaaccc ggtcagttcg acttttcacg gccgcgacgt
     2041 gtttgcgcct gcggcagcag cgctgtccaa cggcctcgtg gccgctgagg ttgggccgcc
     2101 gctcgagaac atcgtcatgc tcgcgccgct cttgccgcgc acgacgactg acgccatcga
     2161 aggctcgctc attcacatag atcgctttgg caactgcatc acaaacttca cgtcagaaca
     2221 catcaacgag gaacgaattg ccgcaggcgc caaactgatc gtcaacaaca ataaaatcac
     2281 ttccattcgc agcttctttg cggatcgaag cgcgccaaag aatgagttgt tcatgctggt
     2341 tggcagtgcg ggctttgtcg aaattgcagc gcaaaatgct tcagcggctg cgattatgtc
     2401 ggccaagcgt ggcgactcag tgttgctcgt tcatgacgac tgtgcgtagg ttcagcgacg
     2461 attcctgctc gcttgtcact ccacaaacgc tctgctatct tcaaatttaa ttcaaaccct
     2521 gaaggacaaa cagatggaca cagcgaagca aggcggcgca gtcagcgcag tagctaccgg
     2581 actgcgaggg gtgatcgcgg ccgcctcatc gatcggcgac gtcaacggag aaaaaggcga
     2641 gctgatttac cagggcgtga acattcacga cctcgcgacg aaatctactt ttgaagaagt
     2701 tgttttcctg ctttggaacg gtcgcttgcc caagcgcgac gagttggacg agttaagaca
     2761 atccctcgcg gcttcgtatc agattcccga aagcattctc gagttaatca aaggatttcc
     2821 cgccgacgcg gatccgatgg attccctacg caccgccgtt tcggcgctcg ctttaaccga
     2881 taaggacaaa cgcgatctgt ctcgtgaaaa cagcatcaag gtcgcgaccc gtctcacagc
     2941 gcagtttccc acactcgtcg ccgccatcga ccgggcgcgg aacggcaagg ttttcgtgca
     3001 cccggaaccg aaattggaca tcgccacgaa ctttctttac atgcttaccg gtgagatgcc
     3061 cgacgaattc gacgcgcacg cattggatgt ggcgctgatt cttcaggcgg atcacgaact
     3121 gaatgcatca accttcacgg cccgagtggt ggcgggcacg ctcgcggaca tgtacagcgc
     3181 ggtcaccgca gcgatcggcg ccctgtcggg ccccctgcat ggcggcgcaa acacagcgat
     3241 catgaaaatc cttcttgaga tcgacgacgt gaataaagtc gagggcttcg tcaaagacgc
     3301 tctgtccagg aaaaagaaaa tcatgggatt cgggcacgcg gtttacaaga ccgaagaccc
     3361 gcgcgcgacc cacctgcgcc gcttctcgaa agagatgggc gagcgcaagg gcgactccaa
     3421 gtggtacgac atcaccgcga agctggaaga aataatgaag cgcgaaaagg gtctgttgcc
     3481 gaacgttgat gcctattcgg cttcgacgta ctacatgatg ggaattccgc tggatctata
     3541 cactccgatt ttcgccatca gccgcattag tggctggacg gcgcacattc tggaacagta
     3601 cgccgacaac aaactcattc ggccgcgcgc cgaatacgtt ggcccacgcg acgttacata
     3661 cgtgccgatt gacgaacgtt agatgcagtt tcaaacgtcg ccggccggta ccgcgcgttt
     3721 gatctccagc ctgttgtcag cacgtgaaat gttgtaggcg gcgcaaatcg cgtcaaccgc
     3781 acctggcaag agaaacttca gcatcggcac atatcgttct cggcccgccg tgcgcagctg
     3841 tccgggtagc cggtctcttt gctcgagcca atttgcagcg ctgagattgc ataattggcg
     3901 gaaaatcttc gacctgattg gcagccaccg acccgtcgtt ctttccttaa ttcgaaatcc
     3961 ggattcacgc tgaagatttg cggcgaacga ttcctgagtc atcacggcaa acaggtagac
     4021 gatctcttca cagtcaatgc cggtcacgct acggaccaga ttacggtcag ccaggctcac
     4081 ggtttcaagc tgaaaactgt ccgttccata gaccgaatga aagagtccgg ccgtgcatag
     4141 ggcttcgtcg gcttgccatt gccataaaag ttctctggtg cccagcagat ggtcgagcaa
     4201 ggttgaaagg gaatgttgcc ccgaccgcgc tcctcgcgat tccagaaagg ccaactgcgt
     4261 gtccagattg ggaacagaca tcggcgaatt aagtcaggcg cttaccaacg gtttcgaaca
     4321 ctgccgaaca tgatccagca tcgcgcccgc tctggtgtct tccggcacga cttcccgcaa
     4381 cctttcgtgc agttggacaa tcgcccgcgc taacaattca gtccgatcac cgatccactt
     4441 actcgtttgg tggtcacgtg ccgaatgatt agcgagctgc gtctcataga acgcgtgcac
     4501 ggcagtgtaa ataacaaaag cctggagcat cactcgtgcg ggcttcgggc gctgagtgac
     4561 gggcgacgtg attagttggt cttccgccgg aagaccgtca ggcggatcgt atgcccacca
     4621 ttgccaaaat cgctggtgat agtattcatg aatcaatgct tccgcgatgc ccgcgcagcc
     4681 gactacaaaa gggttgataa aaattgctcc gaaataggcg agccttagat tgtagctcca
     4741 ccgttcttgg tcgccgatat taggtaccag cacgatcgtc tgaataactc tcttgaggtc
     4801 acaaaccagt tcagacgagt ag
//
LOCUS       DATDBY010000048         5243 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1147300, whole genome shotgun sequence.
ACCESSION   DATDBY010000048 DATDBY010000000
VERSION     DATDBY010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5243
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1147300"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /locus_tag="VIT19_00970"
     CDS             complement(<1..669)
                     /locus_tag="VIT19_00970"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY5837572.1"
                     /translation="MDSFIQTIPFFTAQQRALAMSVAEFTEREIEPRASADERDVEEA
                     LRSYVRLLSEHALLRYAAGTPGERFDLRAFCIIRETISYFSALADLAFVMQGLGTYAI
                     SLAATEHVRDFWLDRARSGQAIAAFALTEPHAGSDVSALKTEARREGDGYIINGHKRF
                     ISNAGVADFYTVFARTGTREDGRAEISAFIVSARMPGFRVAERTEMIAQHPIGELEFK
                     DCRVP"
     gene            complement(869..1039)
                     /locus_tag="VIT19_00975"
     CDS             complement(869..1039)
                     /locus_tag="VIT19_00975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837573.1"
                     /translation="MAGFLHEKTAKWINKLDKSAGREVWHNFWETKLTHKNSYLARLN
                     YVHQNPVKHGLV"
     gene            complement(1352..2143)
                     /locus_tag="VIT19_00980"
     CDS             complement(1352..2143)
                     /locus_tag="VIT19_00980"
                     /inference="COORDINATES: protein motif:HMM:NF006107.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase family protein"
                     /protein_id="HEY5837574.1"
                     /translation="MNSPKSFLYEQRDGIGTITLNRPERLNAITFEVYHELTDFIAKL
                     RDEKDVRVVVITGAGRAFCSGGDVVDIIGELTGRDAEGLLQFTRLTCELIHNMRALPK
                     PIIASLNGTVAGAGACIALASDIRIAAEEAKIAFIFVKVGLAGTDMGATYLLPRVVGL
                     AKATELLMTGDFTEAAEAERIGLYNRVVPREQLETATREFAEKLARGPALGIAKTKEM
                     LNREMHMGFDSALEAEAVAQALCMQTPDFKEAHAAFIEKRPAKFE"
     gene            complement(2150..3196)
                     /locus_tag="VIT19_00985"
     CDS             complement(2150..3196)
                     /locus_tag="VIT19_00985"
                     /inference="COORDINATES: protein motif:HMM:NF045451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837575.1"
                     /translation="MKRCPTCSRVYDDVSLRFCLDDGTELVIKPLETAPQTLLMPGTP
                     ENQPTIEGIQPPLPPSRAAATAPAFQSKRKRNIIIWVLVLGIGLPFIGGVLVAGWLVF
                     NKQQPLSWYLVVEVDPTAPDRISAVRQTSEVLANRLNALGLNHQIEPQGEAGSGRLVI
                     RLPSVENPERIKRIITTLGKLELAHIVSSKNPAPVEIYATREQALDWLNQANKSLSSY
                     RIVHYSAEPAWTPADEYKWVIVEVLPIVDGSSVRDAVAIKSRDTEYQVNFTLNPSGAE
                     RFGAWTAANINEYLAIILDDEVKSAPYIRSQITDQGQITGNFTKESSEDLALVLKAGA
                     LPAPLKFIDEGHNK"
     gene            complement(3202..3597)
                     /locus_tag="VIT19_00990"
     CDS             complement(3202..3597)
                     /locus_tag="VIT19_00990"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY5837576.1"
                     /translation="MAFTFINPESLGAPRGYSNGVLTEGGRLLFIAGQIGWDEQQQIS
                     SDDVVEQFDRALANVIAVVDEAGGRPDQIARLIIYVTDKNEYRDRTKEIGERYRARMG
                     KHFPAMVLVEVKSLLEDRARIEIEGTAVL"
     gene            complement(3686..4045)
                     /locus_tag="VIT19_00995"
     CDS             complement(3686..4045)
                     /locus_tag="VIT19_00995"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5837577.1"
                     /translation="MVIALHHVNVTVPAELEAAAKNFYGTVLGLKQIPKPLTSRQSGA
                     WYEIGETQLHLSVADEGPGQLSSGHVCFAISDLTEAEQNFREAGVEIIPEPKPNASRF
                     FVRDPGGNLLEIAQASV"
     gene            complement(4045..4410)
                     /locus_tag="VIT19_01000"
     CDS             complement(4045..4410)
                     /locus_tag="VIT19_01000"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5837578.1"
                     /translation="MFLGLRTAIYHVGDIEKGKMWYTKVLGIEPYFDQPFYVGFNVSG
                     FELGLQPDDTAAGIRADGAVAYWGVADADAVFKELIALGSTIHEPVQDVGSGIKVGTV
                     KDPFGNIFGIIENPHFKLA"
     gene            complement(4435..4980)
                     /locus_tag="VIT19_01005"
     CDS             complement(4435..4980)
                     /locus_tag="VIT19_01005"
                     /inference="COORDINATES: protein motif:HMM:NF019241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1572 family protein"
                     /protein_id="HEY5837579.1"
                     /translation="MTTQPLGQHYLEDALRTFRENKKLGERAFAQTSDEDFFRTIDDE
                     SNSIAVIIKHIAGNMLSRWTNFLNTDGEKPDRNRDMEFVMLPETTKDEMIAFWEKGWK
                     CTFDALEPLSPDDLMRTVKIRGEDHTVVQAINRQIAHYANHIGQIVYLAKHFKSSEWQ
                     SLSVPKNKSAEFTAQLQNRQL"
BASE COUNT         1091 a         1467 c         1418 g         1267 t
ORIGIN      
        1 cggcacgcga cagtctttga attccagttc gccaatcgga tgctgtgcga tcatctcagt
       61 ccgttctgca acgcggaatc ccggcatgcg cgcgctcacg atgaatgcag aaatctccgc
      121 acgtccgtct tcgcgcgttc cggtgcgagc gaacacggtg tagaaatcag cgacgccagc
      181 gtttgagatg aagcgtttgt ggccgttgat gatatagccg tcgccttcgc gtcgtgcttc
      241 ggttttcaaa gccgagacgt ctgagcctgc gtgaggctcg gtcaaagcaa aggccgcgat
      301 tgcttgtcca ctccgggctc gatccaacca gaaatcgcgc acgtgttcag ttgcggcaag
      361 gctaatcgcg tacgtgccca ggccctgcat cacaaacgcg agatccgcta gcgcggagaa
      421 gtaggaaatc gtttcgcgaa tgatgcagaa ggcgcgcaga tcgaatcgtt ctccaggcgt
      481 gcccgcggcg tagcggagca aagcatgttc actcagcagc cgaacgtacg atcgcaacgc
      541 ttcttcaacg tcccgctcgt cggcacttgc gcgcggttcg atttcgcgtt cggtgaattc
      601 ggcgacgctc atagccagcg cgcgttgctg tgccgtgaag aatggaattg tttgaatgaa
      661 gctgtccatt ttaagaaccg ctagtcattt ggagtgcgcc ggcaaagcgt agcggcgacg
      721 gcgctttgga tcacaccgct accgaccctt cataatcatc aagcactttc aacttgtcga
      781 tcttgaaacc gtaaatcgtc ttcacctgcg ccggtcgtgc ggtgcgctca atccaaccag
      841 cagagcacca gggatactgg ttagcaactt aaaccaatcc gtgcttcacg ggattctgat
      901 gcacgtagtt gagtctggca agataggaat tcttgtgggt aagttttgtt tcccagaaat
      961 tgtgccagac ctcacgtccg gcggacttgt cgagtttgtt gatccatttc gcggttttct
     1021 catggaggaa gccagccatt tgcgctaggt tgtcggcacc ttcatctggt gagtgtccta
     1081 cgaagtgata gtgatttgag aaaaccgacc acgcttcgag tcgccaacca aactcgtttg
     1141 ctaccgataa caagccgcgg tggaggacat ttaagcgatc acgcgtcctg aagtggtgcg
     1201 ccttcaggta ggtgcccgct gtgacaatgt aagtgccgcg tgctgatagt tggtgaagcg
     1261 gtgcgtgcgg ccaagtgatt cgttgaggcg tgctcatttg cgaatccatc caaagcgccg
     1321 tcgccgcttc gctctgccgg cgcactccaa atcactcgaa ctttgccggc cgcttctcta
     1381 tgaaggcggc gtgcgcttct ttgaaatccg gcgtttgcat gcacaaggct tgcgcgaccg
     1441 cttcagcttc cagggccgaa tcaaatccca tgtgcatttc gcgattcagc atctctttcg
     1501 tcttcgcgat gcccaacgcc ggtccccgcg caagtttctc ggcaaattcg cgcgtcgcgg
     1561 tttcaagttg ctcgcgcggc acgacgcgat tgtaaagccc gatccgctcg gcctcggcgg
     1621 cttccgtaaa gtcgcccgtc attaacaact cggtggcctt cgcgagaccc acgacgcgtg
     1681 gcaacaaata agtcgcgccc atgtctgtgc cggctagtcc aacttttaca aagatgaaag
     1741 caatcttcgc ttcttcggcg gcgatccgaa tgtctgacgc caacgcgatg caggcgccgg
     1801 cgccggcaac cgtgccattc aggctggcga taatcggttt cggcagcgcg cgcatgttgt
     1861 gaatcaactc gcacgtcagc cgcgtgaatt gaagcagccc ttcggcgtcg cggcccgtga
     1921 gctcgccaat gatgtccacg acatctccgc ccgagcaaaa cgcgcggccc gccccggtga
     1981 tcacaacgac gcggacatct ttttcatcac gcagcttcgc gatgaagtcc gtcagttcgt
     2041 gatacacctc gaacgtgatc gcattcagac gttcgggacg attcaaagtg atcgtgccaa
     2101 taccgtcacg ctgttcgtaa agaaatgatt ttggactgtt catctgcggc tacttgttat
     2161 gtccctcatc tataaatttc aggggcgccg gcaaggcgcc ggctttcaga accagcgcca
     2221 aatcttcgga tgattctttc gtgaaattgc cggttatctg cccttgatcc gtgatttggg
     2281 aacggatgta gggagcggat ttcacttcgt cgtccagaat gattgctaga tattcgttga
     2341 tgttcgcggc cgtccaggcg ccaaaccttt cggcgccgct tgggttgagc gtgaaattca
     2401 cctggtattc ggtatctcgg cttttgatcg caaccgcgtc tctaactgag cttccgtcga
     2461 caatgggcag gacttcaacg atcacccatt tgtattcgtc ggccggcgtc cacgccggtt
     2521 cggccgagta gtgaacgatg cgatagctcg acaaactttt gttcgcttga ttaagccagt
     2581 ccaaagcttg ttccctggtt gcgtagattt ccaccggcgc cggattcttc gaactcacga
     2641 tgtgcgccaa ctcaagtttt cccagcgtcg tgatgatgcg tttgattctc tcagggtttt
     2701 caactgaagg cagtctaatc accaaacggc ccgagccggc ttcgccttgc ggttcgatct
     2761 gatgattcaa accgagcgca tttagacgat tcgccaacac ctcggaagtc tgtctaacgg
     2821 cggagattcg atcaggcgca gttggatcaa cttcaaccac caaataccat gacaacggct
     2881 gttgtttgtt aaagactagc cagccggcga ctaggacgcc gccgataaag ggcaggccaa
     2941 tcccgagcac gagaacccaa ataatgatgt tgcgctttcg cttgctctga aatgctggcg
     3001 cggtggccgc ggcacgagat ggtggcagag gaggttgaat tccctcgatg gtgggctggt
     3061 tttccggcgt ccccggcatc aacagtgttt gcggagcagt ctcgaggggt ttgataacca
     3121 gttccgtccc atcgtcgaga cagaatcgta aactgacgtc gtcgtaaact cgactacacg
     3181 tgggacatcg cttcatcgtt tctagagaac agccgtccct tcgatttcga ttcttgcgcg
     3241 gtcttccaaa aggctcttca cttcgaccag caccatcgcg ggaaaatgtt tgcccatgcg
     3301 cgcgcgataa cgctcaccga tttccttcgt tcgatcgcgg tattcattct tgtctgtgac
     3361 gtaaatgatc agtcgcgcga tttgatccgg tcgcccaccg gcttcatcga cgaccgcaat
     3421 cacattcgcc agcgcgcgat cgaattgctc aacgacatca tcgctggaga tctgttgctg
     3481 ctcgtcccat ccgatttggc ccgcgatgaa aagtaagcgg ccaccttcgg tcaatacgcc
     3541 gtttgaatag ccgcgcggcg cgccgagtga ttccggattg atgaaagtga aggccatgcg
     3601 tttttctcag tgaacctctg tgattctctg tgcctctgtg gtaactgatc gtctttttac
     3661 cgcaaagaca cagagggcca cagagttaca cagaggcttg cgcaatttcc aacagattgc
     3721 cgcccgggtc gcggacaaaa aaccgtgacg cattcggttt cggctcaggg atgatctcga
     3781 ctccggcttc gcggaagttc tgttcagctt ccgtcaggtc agaaatggcg aagcagacat
     3841 gaccggaact caactggccg ggtccttcgt ctgcgaccga aaggtgcaac tgggtctcac
     3901 cgatttcgta ccacgcgccg ctttggcgcg acgtcaacgg ttttggaatc tgcttcaaac
     3961 caaggacggt tccataaaaa ttcttcgcgg ccgcttcaag ttccgcgggc accgttacgt
     4021 tgacgtgatg aagggcaatg accattaagc gagcttgaaa tggggatttt cgataatgcc
     4081 aaagatgttg ccgaagggat ctttaaccgt cccaactttg attcctgaac cgacgtcctg
     4141 cacaggttcg tgaatcgttg agcctagtgc gattagctct ttgaaaactg cgtccgcatc
     4201 agcgaccccc caatatgcga ctgctccgtc agctcggata ccggcagcgg tatcgtccgg
     4261 ttggaggccg agttcaaatc cactcacatt gaatccgacg tagaacggct gatcgaagta
     4321 aggctcgatt ccgaggacct tggtgtacca catcttgcct ttttcaatgt cgccgacgtg
     4381 ataaatagct gtgcgtagtc cgagaaacat gaattcaaac ccttgcctct gtgcctacag
     4441 ttggcgattc tgtaactgag cggtgaactc ggccgacttg ttcttcggca cgctcaggct
     4501 ttgccactca ctggatttaa aatgcttcgc gagatagaca atttgcccga tgtgattagc
     4561 gtaatgagca atctgccggt tgatggcctg cacgactgtg tgatcctctc cgcgaatctt
     4621 aaccgtgcgc atcagatcgt cgggcgataa tggttcgagc gcgtcgaacg tgcatttcca
     4681 ccccttctcc cagaacgcga tcatctcgtc cttcgtcgtc tcgggcagca tcacgaattc
     4741 catgtcgcga ttgcggtccg gcttttcgcc gtcagtgttc aggaaattag tccagcggga
     4801 aagcatgttg ccggcaatat gcttgatgat gacagcgata ctgttcgact cgtcgtcgat
     4861 cgtgcgaaag aaatcttcgt cgctggtttg cgcgaaggcg cgctcgccga gcttcttgtt
     4921 ttcgcgaaac gtccgcagcg cgtcttccag ataatgttgt ccgagaggtt gagtggtcat
     4981 tttgcgtttg tttctggcgg caaagccgca gcactgtgcg gtgaggcttt gcctccacgg
     5041 cgtgtcatga atttcgtaaa gaggctgcgc ctccgagcgt tgaggcgaag cctcaccgct
     5101 aacttcataa aaggcgtcta tcggtaagcc acaggcttac cgcactgtgc tgcggcaaag
     5161 ccgcactgcc gtcaacgtaa tcctcgaatg gtgttcgcgg cgtctgcgcg gggcacggag
     5221 ttctgctcgc cgcttcgcat atc
//
LOCUS       DATDBY010000049         2303 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_980251, whole genome shotgun sequence.
ACCESSION   DATDBY010000049 DATDBY010000000
VERSION     DATDBY010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_980251"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..521)
                     /locus_tag="VIT19_01010"
     CDS             complement(<1..521)
                     /locus_tag="VIT19_01010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837580.1"
                     /translation="MNTPEESAPQEPGSADPAIVSEASIASSNNIDPDNPPWGVVQAF
                     LTWTASVVLLWLVPQLCALPYIATHYGGTAGPTREILLADKTFIVILIAGFFPAHALT
                     LLVTWAVSSRLGKFRPWRTLGLSWPRSFGPWTSAGLAVLMFLIAMLIIYTFGQQETEL
                     ERILRSSRTAAILT"
     gene            complement(570..>2303)
                     /locus_tag="VIT19_01015"
     CDS             complement(570..>2303)
                     /locus_tag="VIT19_01015"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEY5837581.1"
                     /translation="PVVLDEEVLGLIGLHQTRAPRVWTDEEVAFLVSIATQLAIGYQY
                     TRIYTDKKREAETTKALLEIANVLNARSDFREVTSAVMQRTLSLIGADYCALGVLDSD
                     EKRIRLAAFEAAPHAVTDRVRGLIETHGQSLDITAYPAMVDVLAQGKTLKLVETDLPL
                     PVRMGFIATLGGRAALVSPVRVANHTFGLLGLVWSESRDGFRDQEIALVEGIADQIGT
                     ALERDQLTAEVLRLKHALHERYGEDRIIGQAPTIRRAMELALNVADTQTSVMIQGESG
                     TGKELLANLIHFNSGREDKPYIKLNCGAIPETLLESELFGHEKGSFTDARSRRRGRFE
                     EAHDGTLFLDEVGEMSLAAQVRLLRVLQDGEFTRVGGNEVLKSDVRIIAASNVDLEQA
                     VETGKFRRDLFYRLSVFPIQLPPLRERPEDIHLLVIHFLEHYKQRTGRFVSGISKDAL
                     RALISYEWPGNVRELENAIERAVIIAAGRQIELEDLPAAIANVAAQRQATVRAERAHA
                     ASEGRSATLEVDLPSSMDEIERHAIEATLDYTSGDKTRAAKLLNIGRKTIYRKLDQYN
                     GKKTESPSDQE"
BASE COUNT          464 a          692 c          667 g          480 t
ORIGIN      
        1 gtcaaaattg cggccgtacg cgaactgcgc aaaattcgtt cgagttcggt ctcctgttgg
       61 ccgaatgtgt agatgatcag catcgcgatt aggaacatca gaaccgcgag gccagcactt
      121 gtccatgggc caaaactgcg cggccagctc aacccaaggg ttcgccatgg gcgaaacttg
      181 cccagcctgc tactgactgc ccacgtcacc agcagcgtta acgcatgcgc cgggaagaat
      241 cctgcgatca ggatcacaat gaacgtcttg tccgcgagca gtatctctct ggtaggtccg
      301 gccgtcccgc cgtaatgcgt agcgatgtac ggcagcgcgc acaattgcgg caccagccac
      361 aacaaaacga cgctggcggt ccaggtcaga aatgcctgaa ctactcccca gggaggattg
      421 tccgggtcga tgttgttgga agacgctatc gaagcttcac taacgattgc cggatcggct
      481 gatccaggct cttgaggtgc ggactcttcg ggtgtgttca cgcggcagca gtttagcgca
      541 tgaactgaga gagcgctacg cgtacgtcgt tattcctgat cgctgggaga ctcggtcttc
      601 ttgccgttgt actgatcgag cttgcgatag attgtcttgc ggccaatgtt caggagtttc
      661 gccgcgcgcg tcttgtcgcc ggaggtgtaa tcgagcgtgg cctcgatcgc gtgccgttcg
      721 atttcgtcca tcgatgacgg aaggtcaacc tcgagcgtgg cggaacgacc ttcgctggct
      781 gcgtgcgcac gctcggcgcg cacggtggcc tgccgctgcg cggcgacgtt cgcgattgcc
      841 gccggtaaat cttccaactc aatctgtcgt ccggcggcaa tgatcaccgc gcgctcaatc
      901 gcgttctcga gttcgcgcac attgcccggc cactcgtagc tgatcagggc gcgcagcgcg
      961 tctttggaaa ttcctgaaac gaaacggccg gtgcgctgtt tgtaatgttc gagaaagtga
     1021 atcacgagca ggtgaatgtc ttccggtctt tcgcgtagcg gcggcagctg aatcggaaaa
     1081 accgacaagc gataaaagag gtcgcgccgg aacttgccgg tttcgactgc ctgttcaaga
     1141 tcgacattgg acgccgcgat gatgcgcaca tccgatttca aaacctcgtt gccgccaacg
     1201 cgcgtaaact cgccgtcctg cagcacgcgc aggaggcgca cctgggcggc caaactcatt
     1261 tcgccgactt catcgagaaa gagcgtgcca tcgtgagctt cttcgaaacg gccgcggcgg
     1321 cgcgagcgcg cgtcggtgaa cgagcctttt tcgtgcccga agagctcaga ttccagcagc
     1381 gtctcaggaa tcgcgccgca attgagtttg atgtaaggct tgtcttcgcg acccgaattg
     1441 aagtgaatca ggttcgccag gagttctttg ccggtgcccg actctccctg gatcatcacc
     1501 gacgtctgcg tgtccgctac gttcagcgcg agctccatgg cgcgccgaat cgtgggcgcc
     1561 tggccaatga tgcgatcttc gccgtagcgt tcgtgcagcg catgcttcag tcgcaaaact
     1621 tccgctgtca gttgatcgcg ttccagcgcc gttccaattt ggtccgcgat accttcgaca
     1681 agcgcgattt cctgatcgcg gaagccatcg cgcgattcac tccacaccag gccaagcaag
     1741 ccgaatgtgt gattggcgac gcgcacgggt gaaaccagcg ccgctcgccc gccaagcgtg
     1801 gcaatgaaac ccattcggac aggcagcggc agatcagtct caaccagctt tagcgttttg
     1861 ccttgcgcca gcacgtccac catcgccgga taggcggtaa tgtcgagcga ttgaccatgc
     1921 gtctcgatca agccgcgcac acggtcagtc accgcatgcg gcgcagcctc gaatgccgcg
     1981 agcctgattc gcttttcatc cgaatccagc acgccaagcg cacaataatc ggcgccaatt
     2041 agagacagcg tccgttgcat gaccgcggaa gtaacttcgc gaaagtccga tcgcgcgttc
     2101 agcacgttcg cgatttccaa aagagctttg gtcgtctcag cttcgcgttt cttgtccgtg
     2161 taaatccgcg tgtactgata gccgattgcc agctgcgtcg cgatcgagac gagaaacgca
     2221 acctcctcgt cggtccacac gcgtggcgcg cgtgtctgat gcaggccgat gaggccgaga
     2281 acttcctcgt caagcaccac cgg
//
LOCUS       DATDBY010000050         3391 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1579307, whole genome shotgun sequence.
ACCESSION   DATDBY010000050 DATDBY010000000
VERSION     DATDBY010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3391
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1579307"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1132)
                     /locus_tag="VIT19_01020"
     CDS             complement(<1..1132)
                     /locus_tag="VIT19_01020"
                     /inference="COORDINATES: protein motif:HMM:NF036484.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837582.1"
                     /translation="MTHEAIEVRGARVNNLKNISFSIPINQLTVVTGVSGSGKSSLAF
                     DTIYAEGQRRYVESLSAYARQFLERMDKPDVDEIRGIAPAIAIRQKNSTRNPRSTVGT
                     QTEIYDYLRLLFARVGTTICRACGREVHRDSPESAAAETLAHLAEGSRFHVLFPADAG
                     LFVELNGNGAATQTRRNGDAATRRKNKSTSLPLALSPSQRVAHVMSLMQRGFTRLLHE
                     GEQIDLASPDDYKLDHFENVYVLVDRLAAREDIRQRLVDSLETCFREGHGQAMIEVAD
                     GTHAGTHVSGVLPDKRAGGAPTATRLRFSEGFECKYDSILYATPEPRLFSFNNPFGAC
                     PTCQGFGNTIGLDLELVIPNPGLTLAEGAIEPWTKPQYEWFTK"
     gene            1352..2488
                     /locus_tag="VIT19_01025"
     CDS             1352..2488
                     /locus_tag="VIT19_01025"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEY5837583.1"
                     /translation="MRRALNAWKLSLCALLIFLVAPLAGAQQSSVAAKTEANAISPSL
                     SQAQIDNIIARFTAKETEFRRALNSYAFKRDALVQEVGMGGQVVGEFRRVSDFTFDDH
                     GNRYEKINFSPMPTFSGITKEDLEDLGGVNPFALEAPRIGLYNLKYVGKERIDELDLY
                     VFDVAPKVTPDPKKTKERFFIGRIWVDDNDLQIVKSKGKAIPETKDNKFPIVETYREQ
                     IDGKYWFPTYAYADDDLIFDNGTSYRIRMQVKYTDYKVGRGKVTITELEEVKPETSQT
                     QTDNRPRPVGPVESGELNGKAIDLPKPIYPGEARKAKVTGQVKVRVIVAETGKVLSAD
                     IVSGPKQLWLAAIEAARQARFKPTLIGGSAVKITGILTYDFVEE"
     gene            complement(2507..2827)
                     /locus_tag="VIT19_01030"
     CDS             complement(2507..2827)
                     /locus_tag="VIT19_01030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837584.1"
                     /translation="MSSRWRRFEVLLPLQFNDGSDIPAESLAEAVLEIVDHVGAASYE
                     TQKVEGHWRHGGVLIRDNLVKIVVDVPDAPDTRRWMRDYKMRWRTRLKQIELWMISYA
                     VEVE"
     gene            complement(3038..>3391)
                     /locus_tag="VIT19_01035"
     CDS             complement(3038..>3391)
                     /locus_tag="VIT19_01035"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY5837585.1"
                     /translation="VESLKVATERLRSGISFGVCPEGTRAKPGEMLPFKKGAFHMAAQ
                     AGVPIAPIALRNADNLMGKGTGEAWPGTIEMVFLPPVETSWVKNDKDLDSLVRQVEEM
                     IMKEMGIEKLSARRT"
BASE COUNT          758 a          954 c          941 g          738 t
ORIGIN      
        1 ctttcgtgaa ccattcgtat tgcggcttcg tccacggctc aatcgcgcct tcggcgagcg
       61 tcagcccggg attgggaatc acgagttcga gatcgaggcc tatcgtgttg ccgaagccct
      121 ggcacgtggg gcaggcgcca aacggattgt tgaagctgaa cagccgcggc tcaggagtcg
      181 cgtacaggat gctgtcgtac ttgcattcga aaccttccga gaagcggagg cgggtagcgg
      241 taggcgcgcc tccggcacgc ttatcgggaa gcacgccgga gacgtgcgta ccggcgtgcg
      301 taccgtcagc cacttcaatc atcgcctggc catgaccttc gcgaaaacaa gtctcaagtg
      361 aatcaaccag ccgctggcga atgtcctcgc gcgccgccag tcgatccaca agcacgtaaa
      421 cattctcgaa gtgatcgagc ttgtaatcat ccggagaagc taagtctatc tgctcgcctt
      481 cgtgcagcag gcgcgtgaag ccgcgctgca tcagactcat cacgtgcgct acgcgctgac
      541 ttggagatag ggcgagcggg aggcttgtgg acttattctt tctccgcgtc gccgcgtctc
      601 cgtttctccg ggtctgggtc gcagcgccat tgccgtttag ctcaacgaac aatcctgcgt
      661 ccgccggaaa caaaacgtgg aaccgtgagc cttccgccag gtgcgccagc gtttccgcgg
      721 cggctgattc gggcgagtcg cgatggactt cgcgtccgca tgcgcggcaa attgtcgtgc
      781 cgacacgcgc gaacaaaagt cgcaggtagt cgtaaatttc agtctgcgtg ccaaccgtcg
      841 aacgtggatt ccgcgttgaa tttttttgcc gaatcgcgat ggccggtgca atcccgcgga
      901 tctcatccac gtccggcttg tccatccgct cgagaaattg gcgcgcataa gccgagagcg
      961 actccacgta acggcgctgc ccttcggcgt aaatcgtatc gaacgccagc gaggatttgc
     1021 ctgacccgct gacgcccgta accaccgtca gctggttaat cggaatcgag aacgagatgt
     1081 ttttgaggtt gtttacgcgg gcgccgcgca cttcaatggc ttcgtgggtc atggcttaaa
     1141 aacacacgcg gaggctcacg gtcgggagtc tgagcgcatc cgcaaaccag ctatcttagc
     1201 ccgaatcgag ggtgggcgcg aatcgcaaaa caagcgaccg cgggcaacaa ctgtccatgc
     1261 ttagacatct gagagaattg cggacttaag acactgcggc gctataatct ggccgttttg
     1321 tgacccattt aatcaactgg aacaattcga tatgagacga gcccttaatg cgtggaagtt
     1381 gtcactttgc gcgcttctga ttttcttagt cgccccgctt gccggcgccc agcagtcttc
     1441 ggttgccgcg aagaccgaag cgaacgcgat ttcgccttct ctctcccaag ctcagatcga
     1501 taacatcatt gccaggttta cggccaagga aactgagttc cggcgcgccc tgaacagcta
     1561 tgctttcaaa cgcgatgcgc tggtccagga agtcggcatg ggtggccagg tcgtcggcga
     1621 gttccgccgc gtgtctgatt tcacattcga cgatcacgga aatcgttatg agaagatcaa
     1681 cttttctccg atgcccacct tcagcggcat tacaaaagag gatttagaag acctgggtgg
     1741 cgttaatcct tttgccctcg aagctccgag aattggtctg tacaacctta agtatgttgg
     1801 taaggagcgc atcgacgaac tcgatctcta cgtgtttgac gtcgcgccga aggtaacgcc
     1861 cgatccgaag aaaacgaagg agagattctt catcggtcgc atttgggtgg acgataatga
     1921 ccttcagatt gtgaaatcaa aagggaaggc catccccgag acaaaggaca ataagtttcc
     1981 catcgttgag acttaccgcg agcagatcga cggaaagtat tggtttccaa cctacgccta
     2041 cgccgacgac gatctaatct tcgacaatgg aacaagttat cgcattcgga tgcaggttaa
     2101 gtacacggac tacaaagttg gccgcggtaa ggtcacgatt acagaactgg aagaggtaaa
     2161 gccggagact tcccagaccc aaaccgacaa tcgaccgcgg cccgtcggtc ccgttgaatc
     2221 cggcgagctc aacggcaaag cgatcgattt accaaagccg atttatcccg gcgaagcgcg
     2281 caaggcgaaa gtgacgggtc aggtgaaggt gcgagtgatc gtggctgaga caggcaaagt
     2341 actgtcggcc gacatcgtgt ccggaccaaa gcagctttgg ctggcggcga tcgaagccgc
     2401 gcgccaggct cgcttcaagc cgactttgat tggcggttca gcggtgaaga taaccgggat
     2461 cctgacctac gattttgttg aagagtgagg attacgccca gaacgtttac tcgacttcga
     2521 cagcatagct gatcatccac aattcaatct gttttaggcg agtcctccac cgcatcttgt
     2581 agtctctcat ccaccgccga gtgtcgggag cgtccggcac gtcaacgaca atcttcacca
     2641 gattgtcgcg aattagcacg cctccatgac gccagtgtcc ctcgaccttt tgcgtctcgt
     2701 aactggcagc gccaacgtga tctacgattt ccaggactgc ctcagcgagc gattcggctg
     2761 gtatgtcgct tccgtcattg aattgaagtg ggagcaggac ctcgaatcgc cgccatctgc
     2821 tgctcataag tagttctgcc ttttacggag aatgggatgt cttgatcagc aagtgcttcg
     2881 agtgcggctt ccggaacgat atgttcgcct gacttcagaa tgcggccaga gaaacggccg
     2941 agcaaaaaag ccaacgcccg tttttcggtt tcgcggtcag ggaatgtaat cgtaaccata
     3001 ctgcgatact agtcacatcg aggttggcaa gcaagagcta ggtgcggcgc gccgaaagct
     3061 tctcaatccc catctctttc atgatcattt cctcaacctg acgcacgagc gagtcgagat
     3121 ctttgtcgtt cttgacccac gacgtttcga ccggcggcag gaaaaccatt tcgatggtgc
     3181 cgggccaggc ttctcccgtt cctttgccca tcaagttgtc cgcattccgg agcgcgatcg
     3241 gcgcaatggg cacgccggcc tgcgccgcca tgtgaaaagc accttttttg aacggcagca
     3301 tctcgccagg tttagcgcgc gtgccctcgg gacaaacacc gaatgaaatt ccggaccgaa
     3361 gacgttcagt cgccaccttc aggctttcga c
//
LOCUS       DATDBY010000051         6331 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1146178, whole genome shotgun sequence.
ACCESSION   DATDBY010000051 DATDBY010000000
VERSION     DATDBY010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6331
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1146178"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..284
                     /locus_tag="VIT19_01040"
     CDS             <1..284
                     /locus_tag="VIT19_01040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837586.1"
                     /translation="TDFAITTGIHNAQDVLKGLMAGAKVTMMASELLQHGVGRIDEIL
                     QALTGWMAEHEYESVNQMIGSMSQQHCAEPAAFERANYMKILGSYQPTT"
     gene            complement(365..2074)
                     /locus_tag="VIT19_01045"
     CDS             complement(365..2074)
                     /locus_tag="VIT19_01045"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: protein motif:HMM:NF010052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HEY5837587.1"
                     /translation="MSSLKFTPEITRKAATEAGLTGYLLLDHPLLNEGSAFPEAERRR
                     LGLLGLLPYHCSTVEEQLTRVYENYRRKDNDLERYIFLAALQDRNETLFYRLLREHIT
                     EMMPIIYTPTVGEGCRRYSHVFRRPRGLYISYPYREAIPLLLDNAREQDVEVIVVTDG
                     ERILGLGDLGVGGMGIPVGKLSLYTLCAGIHPATTLPVLLDVGTDNRQLLDDPLYLGW
                     RHERVRGAEYDQFIEAFVQAVTDKYPNVLLQWEDFSKHNAPRLLERYRDRLCTFNDDI
                     QGTGAVTVAGILAASKLTGTSFRDHRIVMLGAGSSAIGICDQIVAAMASHGVPAEVAK
                     RSLGLVDSQGLVHTGRVRKEPFKEKYAQPIERLADWQIVDRSRISFPEVISHVKPTIL
                     IGTSAQPGAFTEEVVREMARHVERPIIFPLSNPTSKSEATPIDIFKWTNERALIATGS
                     PYPPLVAERGLVRIGQCNNSFIFPGVGLGVIASGARRVTDAMFVAAARVLSDFSPALH
                     DAGAPLYPPLEQVGKISRRVALAVGIEAQQSDLAPATTVEALEQLISEKMWQLDYQAE
                     HPD"
     gene            complement(2083..3396)
                     /locus_tag="VIT19_01050"
     CDS             complement(2083..3396)
                     /locus_tag="VIT19_01050"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF004126.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEY5837588.1"
                     /translation="MTTDTLTITDNRTGKQYEVPIENETIKALDLRKIKVADDDFGLM
                     TYDPAFMNTASCKSRIAFIDGDKGILEYRGFPIEELAEKSTYLEVAYLLLHGSLPTEA
                     ELKDWTWNITHHTIINESIKKLMDGFHYNAHPMGMLISTLGALSTFYPDAKDIFNEEA
                     RRKQIYRLIAKVPTIAAFAYRHRVGMPYAYPDNDLSYEGNFLNMMFKTTELKYEPNPI
                     LERALSVLFILHADHEQNCSTNAMRSIGSAHTDPFSSLAGAAAALYGPLHGGANEMVL
                     GMLNEIGSVKNVPDYIKRVKAGEFRLMGFGHRVYKNYDPRARIIKKVAYEVFEVTGKD
                     PLLDIAIELERIALEDEYFVKRKLYPNVDFYSGIIYQAMRFPVDMFPVLFAIPRTSGW
                     LAQWAEMLDDGDQKIARPRQVYLGARGQAYIPISQRDGKSEFAKV"
     gene            complement(3501..3923)
                     /locus_tag="VIT19_01055"
     CDS             complement(3501..3923)
                     /locus_tag="VIT19_01055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837589.1"
                     /translation="MKTVFLFLALVGVAVLISTPAAGSKTLVGKKQKATVQFNDAVIL
                     QGVTLKGEYLFLHDDTAMTRGEACTRVYKGDAEIPSKLIVAFHCVPRERAKAAYFAVR
                     MNQVAPGVTEVTEYQFKGDTEAHGVPKAPATAHVHLAF"
     gene            4423..4827
                     /locus_tag="VIT19_01060"
     CDS             4423..4827
                     /locus_tag="VIT19_01060"
                     /inference="COORDINATES: protein motif:HMM:NF013427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HEY5837590.1"
                     /translation="MSSWALLESVEGLEETASSARFGALWELLQGEKEAACRELLAAG
                     PLVRYDSTAVNERDFSEEWTEAIEWRHRDQLEGRLRDIIDAQDRLVDGLYGQCADCGI
                     PIEAMRLVADPTATQCVVCKNSSEPEVTFHTM"
     gene            5844..6272
                     /locus_tag="VIT19_01065"
     CDS             5844..6272
                     /locus_tag="VIT19_01065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837591.1"
                     /translation="MKNLRRLGPALVLGLTIALAGVSFAQSTKQATSDDKHSCCCMSS
                     EGCGDSCQMKKKEGAKNHVTTNTEGCCGCCGDSCQMMKKEGAKNHATSNAKGCCGDSC
                     QMKGSATATAKADSDKHQCCCGDSCNMKHMKHTKDMKGKS"
BASE COUNT         1378 a         1734 c         1795 g         1424 t
ORIGIN      
        1 tgaccgactt cgccatcact accgggattc acaatgcgca ggacgtgctg aaaggactga
       61 tggccggcgc gaaagttacg atgatggcgt cagagctttt gcaacacggc gtcggtcgca
      121 tcgacgaaat cctccaggcg ctgacgggct ggatggctga acacgaatac gaatccgtca
      181 atcagatgat cggcagcatg agccagcagc attgcgccga acccgctgca ttcgaacgcg
      241 cgaactacat gaagattctt ggttcttatc agcccactac ttgaatcaga ttgcgggtag
      301 gtgtcgaaac tcgcgggcct ttcccctcag tctggggaga tctgcttatg ccccacggcg
      361 acgatcagtc agggtgctcc gcttggtaat ccaactgcca catcttttcc gaaatgagtt
      421 gctctaacgc ttcgacggtt gtggcgggcg ccagatcgga ttgctgcgct tcaattccca
      481 cggccagcgc gacccgcctc gagattttgc ctacctgttc gagtggcgga tagagcggag
      541 ctcccgcgtc atgtaaagcg ggcgaaaaat cgctgagtac gcgcgccgcc gccacaaaca
      601 ttgcgtcggt aacgcgccgc gcgccggaag cgattacccc caggcctacg cccgggaaaa
      661 tgaacgagtt gttgcattgc ccaattcgaa ccagcccgcg ctcggcgaca agtggcgggt
      721 agggactgcc ggtggcaatc agggcgcgtt catttgtcca tttaaagata tcgattggcg
      781 tggcttcgct ttttgaagtt ggattggaca gcggaaagat tatcgggcgc tcgacgtgtc
      841 tcgccatctc gcgcactacc tcttcagtga aggcgccggg ctgcgcggaa gttccgatca
      901 gaatcgtcgg cttcacatgc gaaatcactt cagggaaaga tatccgcgac ctatcaacga
      961 tctgccagtc cgccaaccgc tcgatcggtt gcgcgtattt ctccttgaac ggttctttcc
     1021 tgactcgacc tgtatgcacc aggccctggc tatctacgag cccgagcgaa cgctttgcta
     1081 cttctgccgg gacgccgtgg ctggccatcg cggccacaat ctgatcgcaa atgccaatcg
     1141 cggacgagcc ggcgcccagc atgacgatgc ggtgatcgcg aaaacttgtc ccggtcagtt
     1201 ttgacgccgc gaggattccc gccaccgtca ccgcgcccgt accctgaatg tcatcattga
     1261 aagtgcacag ccgatcgcga tagcgctcaa gcagccgcgg cgcattgtgt tttgaaaagt
     1321 cctcccattg cagcaggacg tttggatatt tgtcagtcac cgcctgcaca aaggcttcga
     1381 tgaactgatc gtactctgcg ccgcgcacgc gctcgtgccg ccagccgaga taaagcggat
     1441 cgtcaagtag ttgtcggttg tcagttccca cgtctagcag aaccggcagc gtggtcgccg
     1501 gatgaatccc ggcgcaaagc gtgtacagcg agagcttgcc gaccggaatt cccatgcccc
     1561 cgacacccaa atcccccagg ccgagaatgc gctcgccgtc ggtaaccacg atcacttcaa
     1621 cgtcctgctc gcgcgcattg tccagtagca ggggaatcgc ttcccgatac ggatatgaaa
     1681 tgtagagtcc gcgtggccgg cgaaagacgt gactgtatcg gcggcagccc tcgccaaccg
     1741 tgggcgtgta aatgatcggc atcatctcgg tgatgtgctc gcgtagtaat cgatagaaaa
     1801 gcgtctcgtt gcgatcctga agcgcggcga gaaagatgta ccgctcgagg tcgttatctt
     1861 tgcgccgata gttttcgtac acccgcgtca actgttcttc gactgtcgag cagtggtaag
     1921 gaagcagacc gagtagaccc aaacgccggc gctcggcttc gggaaaggcg ctgccttcat
     1981 tcagcaacgg atgatcgagc agaaggtaac cggtgagacc ggcttcggtg gccgcttttc
     2041 tggttatctc aggcgtgaac ttaagcgaac tcatcggcca ccttaaacct tggcgaactc
     2101 gctcttgcca tcgcgctggg aaatcggaat ataggcttgc ccccgcgctc cgagatagac
     2161 ctggcgcggg cgcgcaatct tctggtcgcc gtcgtccagc atctctgccc actgcgccaa
     2221 ccagcctgag gtccgcggaa tcgcaaacag caccggaaac atgtcgaccg gaaagcgcat
     2281 agcctgataa ataatcccgg aatagaaatc gacgttggga taaagttttc gtttcacaaa
     2341 gtattcatct tccagcgcga tgcgttcgag ctcgatggcg atgtcgagca gcggatcctt
     2401 accggtcact tcgaacactt cgtaagcgac tttcttgatt atccgcgcgc gcgggtcgta
     2461 gttcttgtaa acgcgatgcc cgaagcccat caggcgaaac tcgcccgctt tcacgcgctt
     2521 gatgtagtcg ggtacgttct tgactgagcc gatttcgttg agcataccca ggaccatctc
     2581 gttcgccccg ccgtgcagcg gcccatataa agccgcagcc gcgccggcca gcgatgaaaa
     2641 gggatcggtg tgcgcgctgc cgatgctgcg catcgcattt gtgctgcaat tctgctcgtg
     2701 gtctgcgtgc aggatgaaga gcacacttaa cgcgcgttca aggatcgggt ttggctcgta
     2761 tttcagctca gttgtcttga acatcatgtt gagaaagttg ccttcatagc tgagatcgtt
     2821 gtcgggatat gcatagggca tcccgacccg atgccggtaa gcaaatgcgg caatcgtcgg
     2881 cactttcgca atcagccggt agatctgttt acgacgcgct tcttcattga agatgtcctt
     2941 agcgtctgga tagaacgttg aaagtgcgcc caacgtcgag atcagcatgc ccatcggatg
     3001 cgcattgtaa tgaaagccat ccatcagctt cttaatgctc tcgttgatga tagtgtgatg
     3061 cgtgatgttc caggtccagt ctttcaactc agcttcagtc ggcaggctgc cgtgcaagag
     3121 caggtaagcg acttcgaggt aggtgctctt ctcagccagt tcttcaatcg gaaatccgcg
     3181 gtactcgaga attcctttgt cgccgtcgat gaatgcgatg cggcttttgc acgaagccgt
     3241 gttcatgaac gccggatcgt aagtcatgag gccaaagtca tcgtccgcga ctttgatctt
     3301 gcgcaagtcg agtgctttga tcgtctcgtt ctcgatggga acttcgtatt gctttcccgt
     3361 gcgattatct gtgatcgtca gtgtgtcggt ggtcatcctc aaaagacctc tttcctgtta
     3421 atgtcgcgca aagggtcttg cgccacgccc aggttattga gcgtgacgaa atgcaagacc
     3481 cgtggacgta agtttggcgc tcagaaagct agatgcacgt gcgctgtcgc aggcgccttt
     3541 ggcactccgt gggcttccgt gtcgcctttg aactgatact ccgtcacttc agtgacgcca
     3601 ggcgcaacct gattcatgcg aacggcaaaa taggccgcct ttgcgcgctc gcgcggcacg
     3661 cagtggaacg ccacgataag tttgcttggg atttcggcgt cgcctttgta cacacgcgtg
     3721 caggcttcgc cgcgcgtcat tgccgtgtcg tcatgcagga acaggtattc gcctttcaac
     3781 gtcacacctt gcagtatgac agcatcgttg aattgaaccg tggccttctg cttcttgccc
     3841 acgagagtct tactgccggc ggccggcgtg ctgataagca cggcgacacc aaccagcgcc
     3901 agaaatagaa aaactgtctt catgatgcgt actccttatg gaaaatgaaa acggactcgc
     3961 tgggcggccc acgccgggca gcggccgagg ttcgattaaa tgacgcgcac gcgcgcgtcc
     4021 agtattggcc cgccttgttc gttaaccaca aaaggattgc aatcgagttc cgcgatccgc
     4081 ggagtgtgtg gcgcaacatt ccatcgctat cgcgtcgcgc taacgacgcc gactgttcgg
     4141 aagtggtttg agtttgtgcc tgattggcaa tgggattggt catagaatcg gctcttggaa
     4201 atatgggaag ctctgcaacg tttgtgccct tagccgttgc aaattcattg aacggttcgc
     4261 cgtgcccggt ccgtcgattg cggaaacatc accaatgtct gcgagaaaat tctcattttc
     4321 agcatgcagt tcgtattaat ttcccctgat cgaaattgga atgaaggttg ctcattcacc
     4381 cggaccgagt ggtgtagttg aaattatttt gaggtggcta tcatgagcag ttgggctttg
     4441 cttgagagcg ttgaaggact agaggaaacg gcgtcgagcg cgcgtttcgg cgcgctttgg
     4501 gaattgttgc aaggcgagaa agaagcggcc tgccgcgagc ttttggcggc cggaccgttg
     4561 gttcgttacg attcaacggc cgtcaatgag cgcgatttct cggaagaatg gacggaagcg
     4621 atcgaatggc gacaccgcga tcaacttgaa ggccggctgc gtgacatcat tgacgcgcaa
     4681 gaccgcttgg ttgacggctt gtacgggcaa tgcgcggact gcggaattcc gattgaagct
     4741 atgcgtttgg tagccgatcc cactgccacc cagtgcgttg tgtgcaaaaa cagttcggaa
     4801 cctgaagtca cgttccacac aatgtaaacg ctttggcccg caggtcccgc gctcgcaact
     4861 cgcgagaaca tgcacattca agatagtgac agtgtgctga ttgctgttcg accctgggaa
     4921 tttggcaaca ggcgtgagag tcgccgaacg caaccgcacc gctgttcgca acgaacgtgc
     4981 cagcgtgcgg ctgggcgcgc tctcgcggtt tcgcttccga tcaacgccct catttctaac
     5041 tatcccgaat ctttttgcga gggtcttttt cgagaagaca cacgctaaca cggggaagtt
     5101 cgcgcaccgg gtgtggaagt tttcgcggta gtcagaccag gaaacgccat ttactgagca
     5161 aacccgcggc ataatggttg cactgttaga agttgtcgca ttgtgcagcc gcgacgaacg
     5221 ggttgacgta gagcactcaa gcatgagcga agtcggaggt aaactgcccg cgtgaccgac
     5281 cttggaaaat tccgtaagtc attggcgctg atgctcgtgt tctggtgcgc cggaacgggc
     5341 tgcatgctgg tgagttatgc aaccgccggc gaaaccaccg tcgcggagtc agcgtcggca
     5401 ccgtccgatg cgatgacggc tgtcccgtct tgtcacgcga accttcaaaa gaatcgaaaa
     5461 acgatctcca aaaagactgc tgcggataga gtcgggcaag ttgatcttcc caggccctct
     5521 cgatcacgcg cgatgagttg ctgtccgctg acaagcggat cgattgccgc tgctaatcgt
     5581 cctcaatccc acaactcggc ggctgcgtta gcgaattcgg aatctcagat actgaacctg
     5641 gacctcttat taccagcacc actcgcggcg tcgctgtggc gacctaatcg agcgcattcc
     5701 tatctgctcg attgtgcctt cctaatctag aactctgccg ggacgaacat tatccgcccg
     5761 ctaggcaggg cggtggtctg acaggcatca gtgcatctgc tggtgcaggc aataattttc
     5821 ttatcttatt aggagaaatg aagatgaaaa atctaagacg gctcggtccg gcgcttgtgc
     5881 tgggactgac gattgctcta gccggcgttt cgttcgcgca aagcacgaag caggcaacca
     5941 gtgacgataa acattcgtgt tgctgcatgt cctccgaagg ctgcggtgat tcgtgccaga
     6001 tgaagaagaa ggaaggcgcg aagaatcatg tgacgaccaa tacagaaggc tgctgtggtt
     6061 gctgcggtga ttcatgccaa atgatgaaga aggaaggcgc gaagaatcac gccacttcca
     6121 atgccaaggg ttgctgtggt gattcctgcc aaatgaaggg cagcgcaact gctacggcta
     6181 aggcggactc agacaagcat caatgttgct gtggcgattc gtgcaacatg aagcacatga
     6241 aacatacgaa ggatatgaaa ggaaagtcct aacaaacgcc gggcttggtt cttaacgcgg
     6301 gcgcggcgct cagtggccgc gtccgtgttt a
//
LOCUS       DATDBY010000052         4164 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2367381, whole genome shotgun sequence.
ACCESSION   DATDBY010000052 DATDBY010000000
VERSION     DATDBY010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4164
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2367381"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2026
                     /locus_tag="VIT19_01070"
     CDS             <1..2026
                     /locus_tag="VIT19_01070"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEY5837592.1"
                     /translation="KSIRYVAGKDKQWGVHFFRRIQRFNRELSSWMPFSRSISGNMNQ
                     AGHITGLDGISTERTIELVPSLTFSQDGRFVRSFGVFPFPDPRAATDPGRIVNEPVKF
                     DPGLTLKFVPSPAITLDLAINPDFAQVEADQLVVTANQRFPIFFPEKRPFFLEGIDIF
                     QTRITAVHTRAIVDPDIAVKTTGKIGRNSFGLILASDNGPGNLTIDQRRELASCFERR
                     EIGRTATPPINVVCSNEQFLDKNAYIGVLRLKRDIGKENTIGVLATTYNFIEKHNQLV
                     GLDGRFKLNKQTVFSFQTLGTTSRNFFFDPNEGLTRYRTGNGFGYSTVYSVSGRHWGY
                     EVGGDGFTQDYRADVGFFQRPNSNFNFGFLRYNSDRDPKKKLVSYHIHNFTHINYDWQ
                     GRMYLVESEQMFELSLPRSSWFGMFWEPAWERLFDHEFGATREARPCNPLGGNSATRC
                     TFYGPDNERSSMKHHLSAFFGSNFNKKVQFNGQVTQRWGHFDLDFGNLPKYPRISPPA
                     IEARRLAETGQCNPPAMNEPDLRPPLCFGVPLDPGRGNLLQINGGITYQPTNEFRTSL
                     SLNKQRLVRDDTGEVAFDVNILTWRGTYQFTKAWFARAIIDYNTLNSRARSQFLLGWT
                     PSPGKSFYAGYNDDMNYNGLHPFSQQILPGFRRNSRTYFVKMSWLFRKSF"
     gene            2249..>4164
                     /locus_tag="VIT19_01075"
     CDS             2249..>4164
                     /locus_tag="VIT19_01075"
                     /inference="COORDINATES: protein motif:HMM:NF018190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEY5837593.1"
                     /translation="MGSLRIILQRLIICFLPSAFILCAVSTSTAKSIPTATPAPSPVA
                     SPAGSPTDSPAATTPAPVKGRVVLPPEKSQPVNIGRFEKAPVIDGRLDDAVWQSSTTF
                     KNFYQTSPGDNTEPSKPTEVMMGYDSKTLYIAFHCFDDPDKVSASIAKRDDVLNGVED
                     SIRILLDTFNDQRKAYVLAFNPLGVQMDGIRTEGVNVDFSVDIVMDSKGTITSDGYVV
                     EVAIPFKSLRYEAGQGKLWGIQIFRIIQRLNGEQDSWMPISRDTNGLMNQAGKITGFD
                     GISTERTLELIPSLTVSETGKLLPHYNAIPNDPGRMVNEPVKFDLGLTAKYTLNPTST
                     INLAINPDFAQVEADATVVTTNQRFPIFFQEKRPFFLEGIELFQLPLNVVHTRTIINP
                     LVAAKWVGKQGRTSYGLMVAADRGPGTFTGDERLDSFNFPLLDKKAYIGVLRLTRDVG
                     KESRVGLVATSYNFIEKHNQILGIDGRFKLDKQTTLTLHTVGTTSNRYFRDPELDRTT
                     ACANLTGRERSFCQSRLVYRKGNGFGYLAQLDKAGRNLFIQAFAFGRTRDFRSDVGFV
                     RRTNTNENDFYISWNSTPKQKARLVSWNVESFNQLLYDWHGKIQGAQTGAHLFFNFQK
                     QSFFGGGFDDRYEKA"
BASE COUNT          962 a         1182 c         1107 g          913 t
ORIGIN      
        1 caaatctatt cgttacgtcg ccggcaaaga caaacagtgg ggcgtccatt ttttccggcg
       61 catccaacgc ttcaaccgcg agcttagttc gtggatgcca ttctcgcgca gcatcagcgg
      121 caacatgaat caggccggtc atatcacggg ccttgacggc atttcgacgg aacggacaat
      181 cgagttggtt ccaagtttga ccttctctca ggacggccgg ttcgtgcgct cgtttggtgt
      241 ctttcccttt cccgatccga gagcggcaac cgaccccggc agaatcgtga atgagccggt
      301 caagttcgat ccgggactga cgctgaagtt cgttcccagt ccagctataa ctctcgatct
      361 ggcgatcaat cctgactttg cgcaggtgga agcggatcaa ctcgttgtca cggccaatca
      421 aaggtttccg atcttctttc cggaaaagcg gccgttcttc ctcgaaggca ttgacatctt
      481 tcaaacgcga atcacggcgg tccacacccg ggcgatcgtc gatccggaca tcgccgttaa
      541 gacaacgggg aagatcggtc gcaacagttt cggactgatt ctcgcgagtg acaacggacc
      601 aggaaacctg actatcgacc aacgcagaga gcttgcatct tgtttcgagc ggcgggagat
      661 tggtcggact gctacccctc caatcaacgt tgtatgtagt aacgagcaat ttctcgataa
      721 gaacgcgtac atcggcgtgc tgcggctaaa gcgtgacatt ggcaaagaaa acaccatcgg
      781 cgtacttgcg acgacctaca actttatcga gaagcataat caactggtgg ggctcgacgg
      841 gcgcttcaag ctgaacaagc agacggtttt ctcttttcaa acgttgggca cgacttcgag
      901 aaattttttc ttcgatccga atgaaggtct gacgcggtat cgcaccggaa acggcttcgg
      961 ctattccact gtgtacagcg tctcgggcag gcactggggt tacgaggttg gcggcgacgg
     1021 cttcacccag gactatcgcg cggacgtcgg attcttccag cggccgaact cgaatttcaa
     1081 ttttggtttc ctgcgataca actcggatcg cgatcctaag aagaaactag tttcctacca
     1141 cattcacaac ttcacccaca tcaattacga ctggcaaggg cgaatgtacc ttgtggaaag
     1201 tgagcaaatg ttcgagctga gcctgccgcg cagcagttgg ttcgggatgt tttgggagcc
     1261 tgcgtgggag cgcttattcg atcatgaatt tggcgccacg cgcgaggcgc gcccgtgtaa
     1321 tccgcttggg ggcaacagcg cgacgcgctg caccttctac ggcccagaca acgaacgctc
     1381 ttcaatgaag catcacctgt cggccttctt cggttcgaac tttaacaaga aagttcaatt
     1441 caatggtcaa gtcacgcagc gctggggaca ctttgatttg gatttcggca acctgccgaa
     1501 gtacccacgt ataagtccgc cggcgattga agcgcgcagg ctagccgaaa caggccagtg
     1561 caatccaccg gcgatgaacg agccggacct gcgcccgcct ctctgttttg gcgtgcctct
     1621 ggatcccggc cgcggaaacc tgctgcaaat aaacggtggc atcacctatc agccgacgaa
     1681 cgagtttcgc acgtcgctga gtctcaataa gcagagattg gtgcgcgacg acaccggcga
     1741 ggttgcgttt gacgtcaata ttcttacctg gcgggggact tatcagttca ccaaggcctg
     1801 gttcgcgcgc gccatcatcg attacaacac gctgaattca cgcgcgcgtt cgcaattcct
     1861 gctgggctgg acgccgagcc ccggcaaatc gttctacgcg ggctacaacg acgacatgaa
     1921 ctacaacggc ttgcatcctt tcagccagca aattctgccc ggcttccggc gcaatagccg
     1981 cacgtacttc gtcaagatgt catggctgtt ccgcaagagc ttttgagcta actcaacttg
     2041 gcccgggcgc ggctccgccg cctgatgtgc ggtaaggctc tgccttaccg ataacatgca
     2101 gaagttagtc tttcgctgat tcgaggctgc gcctcgaatc agcgaagtaa gaatggaatt
     2161 tgatggcgtc cggaaaggca tagcctttcc gcacatcggg cggcagagcc gctctagctg
     2221 gacttcgata catttcggaa gaacaagaat gggaagttta agaattattc ttcaacgcct
     2281 gatcatctgc ttcctcccgt ccgcatttat cctttgtgcg gtttccacgt cgaccgcgaa
     2341 atcgatcccg acggccacgc ccgccccatc gcccgttgcg tctcccgctg gctcgccgac
     2401 agattctccg gccgcgacaa ccccggcacc ggtaaaaggg cgtgtcgtcc tccccccgga
     2461 aaaaagccaa ccagttaaca tcggcaggtt tgaaaaggcc ccggttatcg acggccgtct
     2521 tgacgatgcc gtctggcaaa gcagcacgac cttcaagaat ttctatcaaa ccagtccggg
     2581 cgacaataca gagccttcaa agcccaccga agtgatgatg ggctacgatt caaagacgct
     2641 ctacatcgcg tttcattgtt tcgacgaccc tgacaaggtc agcgcatcaa tcgccaaacg
     2701 tgacgatgtt ctgaacgggg tcgaagacag cattcgcata ctgctcgaca ctttcaacga
     2761 tcagcggaag gcgtacgtgc tcgcattcaa tccgctcggc gtccagatgg acggcattcg
     2821 taccgaaggt gtaaacgtcg atttcagcgt cgacatcgtg atggattcga aagggacgat
     2881 caccagcgac ggttacgtcg tcgaagttgc gattccgttt aagtctctgc gttacgaagc
     2941 cggccaggga aaactttggg gcattcagat ttttcgcatc atccaacgct tgaacggcga
     3001 acaggattcg tggatgccca tctcgcgcga cactaatggg ttaatgaatc aggcgggaaa
     3061 aattaccggg ttcgatggca tttcaactga acgtacgctc gagctgattc ccagtctgac
     3121 tgtttcagaa accggcaagc tgctgccgca ctacaatgcg attccgaatg atccggggcg
     3181 gatggttaac gagccggtca aattcgatct cggattaacc gcgaagtaca cgctgaaccc
     3241 gacctcgaca attaatctcg caatcaatcc cgactttgcc caagtcgaag ccgacgcgac
     3301 cgtagtcacg accaaccagc gctttccgat cttctttcag gagaaacggc ccttctttct
     3361 cgaaggcatc gaactttttc agttgccgtt gaacgtcgtg cacacgcgca cgatcatcaa
     3421 cccgctggtg gccgcaaagt gggttggcaa gcaaggacgc acctcttacg gtttgatggt
     3481 ggcggcagat cgcggcccgg ggacattcac cggtgacgaa cgactcgatt cattcaattt
     3541 cccgctactg gacaagaaag cctacatcgg cgtgctgcgt ctgactcgcg acgtgggcaa
     3601 ggaaagccgg gtcggattgg tggcgacgtc gtacaacttt attgagaagc acaaccagat
     3661 tctgggcatc gacggccggt tcaagctcga caagcagacg accctgacgc ttcacaccgt
     3721 gggcaccact tcgaatcggt actttcgcga tccggaactc gataggacga ctgcctgcgc
     3781 gaacctgacc gggcgtgaac gaagcttctg tcaaagccgc ctggtttacc gcaagggaaa
     3841 cggtttcggt tatctcgcgc aactcgacaa ggcgggacgc aacctcttca tacaggcgtt
     3901 cgcgttcggc cggacgcgcg attttcgttc ggatgtcggc tttgtccgcc gcaccaacac
     3961 gaacgaaaac gatttctaca tctcctggaa ttcgactccg aaacagaaag cgcgattagt
     4021 atcgtggaac gtcgaaagct tcaatcagct tctctacgac tggcacggta aaatccaggg
     4081 cgcgcaaacg ggtgcgcact tgttctttaa tttccaaaag caatcgttct ttggcggcgg
     4141 ctttgacgac cggtacgaaa aagc
//
LOCUS       DATDBY010000053         2481 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1145025, whole genome shotgun sequence.
ACCESSION   DATDBY010000053 DATDBY010000000
VERSION     DATDBY010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2481
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1145025"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..656)
                     /locus_tag="VIT19_01080"
     CDS             complement(<1..656)
                     /locus_tag="VIT19_01080"
                     /inference="COORDINATES: protein motif:HMM:NF014458.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEY5837594.1"
                     /translation="MLDLNYVRENLDAVRAALAKREMATAALDDFAAADADRRRVISE
                     SDQLNAERNAASREIGAMMKDGKRDEADARRKQVNELKERIAELDAARDQAEARMREL
                     LSTLPNIPHESVPVGKDESANVEIRRWGTKPEFDFEPKDHVDLGTALGILDLERATKI
                     AGARFAILNGAGARLERALIDFMLDLHTTEHGYTETLPPFIVNRDALFGTGQLPKFEQ
                     "
     gene            1127..1792
                     /locus_tag="VIT19_01085"
     CDS             1127..1792
                     /locus_tag="VIT19_01085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837595.1"
                     /translation="MADWLVNIVTGASGDAEFVVGLPGSKQGQALQADQDDLVSWNNE
                     TNDEHQPWQTDQNYDPLDTSDMSGLIKPGQSSDAYDCAQPSGSPPQWTVYYYCNRHPD
                     NPKERGSIQVAALPQSMVNITGTGPSTAFAPQNLKVAAPGGLPIGWFNSTSQPHQPWQ
                     TDQNYQPLAQSQLAGVIQPNTTSLVYTPPTPPPKTSSTIYYYCKLHPNAQNERGTIVV
                     TSS"
     gene            1861..>2481
                     /locus_tag="VIT19_01090"
     CDS             1861..>2481
                     /locus_tag="VIT19_01090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837596.1"
                     /translation="MTAETQKFNGDEMVTTGKSRKLTWRRWLCAALCLAALVAAFAAW
                     PAEPTSAQQYVPQQYVDCPPEQQSLLRIPELAAVGNILRGTIMLSDEQQAIPFRYPPQ
                     SKPGDPGSVMRCQPQYVRMLRGVNATPAPPAPTGQFPNPMPGPTLRARVGDIINLTFI
                     NQINAAHFGRSIDNGETGVGCDKPVPPGDVFPDCFHGSSTGNIHFHG"
BASE COUNT          513 a          779 c          698 g          491 t
ORIGIN      
        1 tcctgttcga acttcggcag ctgaccggtg ccgaacagcg cgtcgcggtt gacgatgaaa
       61 ggcggcagag tttccgtata gccatgttca gtcgtgtgca ggtcgagcat gaaatcgatc
      121 agcgcgcgtt ccagtcgcgc gccggcgccg ttgaggatcg cgaaccgcgc gccggcaatc
      181 ttagtcgcgc gctccaggtc gaggatgccg agcgccgttc ccaaatcgac gtggtccttc
      241 ggctcaaagt cgaattcagg tttggtgccc cagcggcgaa tctcgacatt tgctgattcg
      301 tctttgccga ccggcaccga ttcgtgcggg atgttcggca gcgtcgagag cagctcgcgc
      361 atccgcgctt cggcttgatc gcgggcggca tcaagttcag cgatccgctc tttaagttca
      421 ttgacttgct tgcggcgcgc atccgcttcg tcacgcttgc cgtccttcat catcgcgccg
      481 atttcgcggc tggccgcgtt gcgctcagcg ttcaattgat ctgactcaga aatcacacga
      541 cgacgatccg catcagctgc tgcgaaatcg tcgagcgcgg ccgtcgccat ttcgcgcttc
      601 gccaaggcgg cccgaacagc gtcgagattt tctcttacat aattcagatc aagcatttgt
      661 gaccgtatta gtttccgttc ttttcacgag ttcgccgatt gcggctcaga ttgtacctga
      721 ggcgtccttg gccgaccacg cccgcagcaa tcagccggtg atataggaag gccacacgcg
      781 tctcacctta cctgggctac ccaaaatacg cttcgttgta tgcgaacttg ctatccgaaa
      841 aaaactcttg actagcagga tacgtcagca tattctcccc gccattcaag aaccttagct
      901 agacgcgcta aaagatccta cttagaagca gttgccctcg cagtctcaac atttgagctg
      961 atgagcattc tattggttct ttcagtcgag gttctgagac agcggcgaac cgtctggctc
     1021 ctatctcaaa acgctgatct ggagatccac gccgctctag tttaatcggg gaagacctcg
     1081 caacagatgg ttcttctccc gccttcttca gccaaggaga aacgacatgg ccgactggct
     1141 agtgaatatt gttaccggtg cttcgggtga tgcggagttc gtggtggggc tacccggctc
     1201 gaaacaagga caagctctgc aagcggatca ggacgacctc gtttcctgga acaacgagac
     1261 caacgacgag catcaaccat ggcagaccga tcagaactac gacccgctcg atacttcgga
     1321 catgtccggc ctgatcaagc ccggccagtc ctctgacgcc tatgactgcg cgcagccgtc
     1381 tgggagcccg ccgcagtgga cggtttacta ctactgtaat cgccaccccg acaaccctaa
     1441 ggagcgcggc tctatccagg tcgcggccct gccgcagagc atggtcaaca tcacgggcac
     1501 gggcccaagc acagccttcg cgccgcagaa cttgaaggtg gccgcgccgg gcgggttacc
     1561 gatcggctgg ttcaacagca cgagccagcc gcaccagccc tggcagactg atcagaacta
     1621 ccagcccctt gcgcagtccc aactggcggg cgtgattcag cccaacacaa cgagccttgt
     1681 ctacacgcca ccgacgccgc cgccgaagac aagctcaaca atctattact actgcaagtt
     1741 gcacccgaac gcccagaacg agcgcgggac gatagtcgtt acgtcgagtt aggcagcgga
     1801 tgcggggaaa gcccctgagc ctgtgcgctc agatcgggac gcagataagg agatattgcg
     1861 atgactgcag agacgcaaaa gtttaacggg gatgagatgg ttaccacggg gaaaagtcgc
     1921 aagcttacct ggcgccgctg gctctgcgcc gctctgtgcc tggccgcact cgtggcggcg
     1981 ttcgcagcct ggccggcaga gccgactagc gcgcaacagt atgttccgca acagtacgtc
     2041 gattgtcctc cggagcagca gtcgctgttg cggataccag aactggcggc cgtgggaaac
     2101 atcctgcgcg gaaccatcat gctcagcgac gagcagcaag ccatcccgtt tcgctatcca
     2161 ccgcagtcga agcctggcga tccgggcagc gttatgcgtt gccagccgca gtacgtgcgc
     2221 atgctgcgcg gcgtgaacgc gactccggcc ccacccgcgc cgacggggca gtttccgaac
     2281 ccaatgccgg ggcccacact gcgtgcccgc gtcggcgaca tcatcaacct tacctttatc
     2341 aatcagatca acgcggccca cttcggccgg tcgatcgaca acggcgagac cggggtcggc
     2401 tgtgacaagc cggttccgcc gggcgacgtc tttcccgatt gcttccacgg gtcgagcacc
     2461 ggcaacatac acttccacgg c
//
LOCUS       DATDBY010000054         2863 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2217502, whole genome shotgun sequence.
ACCESSION   DATDBY010000054 DATDBY010000000
VERSION     DATDBY010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2863
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2217502"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1608)
                     /locus_tag="VIT19_01095"
     CDS             complement(<1..1608)
                     /locus_tag="VIT19_01095"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEY5837597.1"
                     /translation="MASRRIIERYILRTILPYAAAAFVLLTGILFVQQSGRYFETIFR
                     TTVPAQFLYGLSLALLPTVLVFTIPMAVLSGTIIGLGRMGSDSELIAMRAAGVSRWQI
                     LLPALVIGLIATVVALQLNLSEAPHAQQDLRALGARAALYKLDSPVEPQTFTTDIPGY
                     VIYVREGDKSRGQWGGVFIQTKEADGSTRLITARSGRIDSSAEKSELVLQDAVQTKLP
                     ASEATDQQYVVERLDQLRFLFKTGRNELITRLQKSENKPDEMGFRALRRFINESTGPQ
                     HREAVFLLHKRIALGLSPVVFAFFGAVLAMRFRRGSRGFGALTSFAVMVTYYLLVVAG
                     EQLTRGGTVPPVVGGWLATSLVLIFALILLLVNRTFRFSLRRARTANTDLAARDEVKT
                     PQQPARRRWTVRFPTLLDTSVVRTMALSFLFAFVALVIVFNIFTSFELWRFLVTRGGG
                     VKLLGEYLFFLLPLISVELFPGSVLVAALLTYALIARRREAVAWWASGQSVYRLMLPG
                     LVFAMVVAGGLWLIQERIMPAANVKQDD"
     gene            complement(1807..2289)
                     /locus_tag="VIT19_01100"
     CDS             complement(1807..2289)
                     /locus_tag="VIT19_01100"
                     /inference="COORDINATES: protein motif:HMM:NF014607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO C-terminal
                     domain-containing protein"
                     /protein_id="HEY5837598.1"
                     /translation="MAEVLGYMAELIGEFAPPHEANDKLYRMLNACVEALAAAPDAAK
                     LVLRYFEIWLLRLAGSFPDVRECSVCGTELTTAQPLYVDFESMVRCAKCSRGIGTTLM
                     PAIQQLLISSQRLGPSEFANTYQASFTQTDAELGEFTHRLIVRALERRPRTMVAPGRA
                     "
     gene            complement(2317..2556)
                     /gene="recO"
                     /locus_tag="VIT19_01105"
     CDS             complement(2317..2556)
                     /gene="recO"
                     /locus_tag="VIT19_01105"
                     /inference="COORDINATES: protein motif:HMM:NF023393.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEY5837599.1"
                     /translation="MNLVTTDAIVLRSYNLAEADRIVVCLTRDAGLVRAVAKGARRMR
                     SRFGAALEPFTVIRLDFYEKENRDLVTISRAEIVK"
     gene            complement(2578..2751)
                     /locus_tag="VIT19_01110"
     CDS             complement(2578..2751)
                     /locus_tag="VIT19_01110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837600.1"
                     /translation="MRHVLGMVVFAALTAVVFGIAAKGTDRQRLVYGVKVFGEFVAIA
                     FLLGWILYFIPSR"
BASE COUNT          655 a          842 c          807 g          559 t
ORIGIN      
        1 atcgtcttgc ttaacatttg ccgccggcat gatccgttcc tgaatcagcc aaaggccgcc
       61 ggcgacgacc atggcgaaaa ccaaaccggg cagcattaag cgatagacgc tctggccact
      121 ggcccaccag gcgacggctt ctcttctccg cgcgattagc gcgtacgtga gcagtgccgc
      181 gaccagtacg cttccgggaa atagctccac actgatgaga ggcaaaagga agaacagata
      241 ctcgccgaga agtttcaccc ctccgccacg agtaaccaga aaccgccaaa gctcgaagct
      301 ggtaaaaatg ttgaagacaa tcacgagcgc tacgaaggca aacagaaaac tcaacgccat
      361 cgtgcgcacg acactggtgt cgagcagagt gggaaagcga actgtccacc ggcgacgagc
      421 tggctgttgc ggagtcttta cttcatctcg tgccgctaaa tctgtattgg ccgtcctggc
      481 acgacgaagt gaaaacctga atgtccggtt caccagcaga agtataagag cgaagatcag
      541 caccagagac gtcgcgagcc atccgcctac aaccggcggc accgtcccgc cgcgcgtcaa
      601 ctgctcgccg gcgaccacca aaaggtaata cgtcaccatc actgcgaacg aggtgagcgc
      661 gccgaagccg cgactgccgc gccggaagcg catcgccaga actgcgccaa aaaatgcaaa
      721 caccaccggc gataagccga gcgcgattcg cttgtgaagc aaaaagaccg cttcgcgatg
      781 ctgtggccca gtgctttcgt tgataaaccg ccgaagcgcc cgaaatccca tttcgtcagg
      841 cttgttctcg gacttctgta agcgcgtaat cagttcgttg cggccggtct tgaaaagaaa
      901 gcgcaactgg tccagccgct caacgacgta ttgctgatca gtcgcttcgc tggccggcag
      961 ctttgtttgc acggcgtcct gaagcaccag ttcggatttc tcagcggatg aatcgatgcg
     1021 gcctgagcgc gcggtgatca gccgcgttga gccgtcggcc tctttcgttt gaatgaaaac
     1081 accgccccac tggccgcgtg atttgtcgcc ttcgcggaca tagatgacat atcccgggat
     1141 gtccgtcgtg aaggtttgcg gctcgaccgg agagtcgagt ttgtagagcg ccgcgcgtgc
     1201 tcccagggcg cgcaggtcct gctgggcgtg cggggcctca ctaagattga gctgcaatgc
     1261 gaccaccgtg gcgatcagtc cgattaccaa cgcaggaaga agaatctgcc agcggcttac
     1321 gccggccgcg cgcatcgcga tcaactcgct gtcactgccc atgcggccca gaccgatgat
     1381 cgtgccggac agcacggcca tggggatggt gaagaccagc accgtgggaa gcagcgcgag
     1441 cgaaagtccg tataagaact gcgccgggac ggtggtgcgg aaaattgttt caaagtaccg
     1501 gccgctttgc tggacgaaca gaatgccggt aaggaggacg aacgccgccg ccgcgtacgg
     1561 aagtatcgtg cggaggatgt aacgttcgat tatgcggcgg gatgccattg gttagtggat
     1621 tccggattag tccacagatt acacagatta agtcttttgg cctttgaact ttgtactttg
     1681 tactttgaat tcgatttgag actttgtgct gctgtcgcct gcctcctgcc gtctgttgtt
     1741 ctcaatctgc gtaatctgtg gataaaatcg tgtccgcccg ctaccgcagg cggttctgac
     1801 agccttctag gcgcgcccgg gagctaccat tgtgcgtgga cgccgctcga gcgcccggac
     1861 aatcaggcgg tgcgtgaact caccaagttc ggcatctgtt tgagtgaagc tcgcctgata
     1921 cgtgtttgcg aattcggacg ggccaagtct ctggctgcta atcagcagtt gttgaatcgc
     1981 cggcatcaac gtagtcccga ttccacggct gcacttcgcg caacgcacca tgctttcaaa
     2041 atccacgtag agcggctgcg ccgtagtgag ctccgtgccg caaacactac actcgcgcac
     2101 gtccggaaac gatccggcca aacgcagcag ccagatttcg aaatagcgca gcaccagttt
     2161 ggcggcgtca ggcgccgcgg ccaatgcttc gacgcacgcg ttcagcattc ggtacagctt
     2221 gtcgtttgct tcatgcggtg gcgcgaattc accgatgagt tccgccatgt agccgagtac
     2281 ttccgccact tcaagttgtg cggcaagttc aaagttttac ttgacgatct cagcgcgtga
     2341 aatcgtgacc agatcccgat tttccttttc gtaaaaatcc aggcggatga cggtgaacgg
     2401 ctcaagcgca gcgccgaagc gactccgcat ccgacgcgcg cctttcgcga ccgcccgcac
     2461 cagccccgcg tcgcgcgtca ggcagactac tatgcgatca gcctcggcaa ggttgtagct
     2521 acgcaggaca atggcatcgg tggtgaccag gttcacaacg aaccacgctc cgaaaggtta
     2581 tcgagaagga atgaaataca gaatccagcc gaggagaaac gcgatcgcga caaattcacc
     2641 gaagacctta acgccgtata cgagccgctg acggtccgtg cctttggccg caatcccgaa
     2701 aacgaccgcg gtgagggccg cgaaaacaac catccccaga acgtgtctca ttgctttctc
     2761 cccgcggcga tatcgaatgc gtcaagcatg actaagtaat ttagcagacc agcgacgagc
     2821 aaaaaggccc atccgtactc ggacgtcacc agctcgtggt gtt
//
LOCUS       DATDBY010000055         3525 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2367199, whole genome shotgun sequence.
ACCESSION   DATDBY010000055 DATDBY010000000
VERSION     DATDBY010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3525
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2367199"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1705)
                     /locus_tag="VIT19_01115"
     CDS             complement(<1..1705)
                     /locus_tag="VIT19_01115"
                     /inference="COORDINATES: protein motif:HMM:NF024120.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEY5837601.1"
                     /translation="MTWKNGAFRISWLLILVGFFAGNAVSSAKFHQPTNPKISSTAVA
                     AVTLNLMDFGAVGDGVADDGPALQAALDALATAGGGTLFVPAGHYALITPVSKDFSGL
                     ASSVVIVGETPVPVPESGGPGRGLGLSSEFVVKVGDTANAIAISGLESFLIQDIAFVG
                     VETVLTDARVVLTLTDINDATIQHCEFYGLASFVSGGAIVKSHHCNLKIHDSAFLGCT
                     TNSGITTSVVQVNQWQGFTITGTRFIDYGNRPFFGKTPWAAPYSWIMVGGAATIDGAS
                     AWREIVIRDVFLDEGAFIGLSLRPDLFPPSGPIDLFFISGLGMNVTNLGSYGHYLLRA
                     RRLFIEDSHYGWSHNSSGAMHVASAGEVILDQLECVDDATRISVDSETGKLTVINSIY
                     QELDSHAQITNVLNTSPGDDPVEIVRQQFLTSTSQEPEPAALFYWTSQLLNCGTDVQC
                     QQQTGSALATFLSNQPQTRFTISGHVQESDGSSVAGATVTLNNSVSVQTDSDGFYSFA
                     NLPTSGSYTVAVARNNYTFTPASQVITTPLSNSVLDFTGVMRTFLLYGYLIYPNGQGI
                     PN"
     gene            2056..3054
                     /locus_tag="VIT19_01120"
     CDS             2056..3054
                     /locus_tag="VIT19_01120"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5837602.1"
                     /translation="MKISVVIPVRNEEESLPILLEGLMGQSRRPEEIVITDGGSTDRT
                     PQIIEEYIERGAPIHLVRAGMAMPGRGRNLAAEQATSEWLAFTDGGMRVAGNWLEGMA
                     ERAEREGVDVVYGGMDPVVDTFFKECAAIAYVKPPKETSGTQVRPQFIASALMRRSVW
                     QAVGGFPEHLRSAEDLLFMNKVSEAKFRTVFAPDAKVFWNLQPTFWRTFRRFYIYSRH
                     NIRAGLARQWHANIFTQYAMILLCGLPALAFGWQWWVAATIAVWLLALTARSILSISR
                     NRSCLPAGVFRNAARTVMIVPLLAVIDLATFLGTISWIVRDKLNLGSASVGTPNGA"
     gene            3089..>3525
                     /locus_tag="VIT19_01125"
     CDS             3089..>3525
                     /locus_tag="VIT19_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837603.1"
                     /translation="MLDPLGQSQVIPYLRELSKAGVRFTLLSFERGTAWTDEGLARCA
                     NLKRELAAEGIEWHWLRYHKRFSLPATVYDVLAGTRYARGLVRRNSIEIVHARSHIPA
                     TIALSLKQDFGLKMIFDVRGLLAEEYADAGHWQKGSARYRLTKR"
BASE COUNT          820 a          945 c          985 g          775 t
ORIGIN      
        1 tgttcgggat tccttgccca ttcggataaa tcaaataccc atagagcagg aaggtgcgca
       61 tcactccggt aaagtccagg acgctattgc tgagcggagt agtaataacc tggctcgccg
      121 gcgtgaatgt ataattgttt cgggccacgg ccactgtata actcccgctt gtcggcaggt
      181 tcgcaaacga atagaagccg tcactgtcgg tttgaactga gaccgaattg ttcaacgtca
      241 cggtcgctcc ggccacgctg ctgccgtcgc tctcctgcac atgccctgag atcgtgaacc
      301 ttgtctgcgg ctgattactc aagaacgtag ccaaagcgct gccagtttgc tgctggcact
      361 gaacatccgt accacaattg agcagttgac tggtccagta aaagagcgct gccggctcgg
      421 gctcctgact tgttgacgtg agaaattgtt gacgcacgat ctcaaccgga tcgtcgccgg
      481 gactggtatt cagaacatta gtaatctgcg cgtgcgaatc aagttcctgg tagatcgagt
      541 tgatgaccgt tagctttccc gtctcgctat caacagaaat tcgggtggcg tcatcgacgc
      601 actccagttg atccagaatc acctcgccgg ctgaagcaac gtgcatggcg ccgctcgagt
      661 tgtggctcca gccgtaatgc gagtcttcaa tgaacaaccg gcgggcgcga aggagatagt
      721 gtccgtagga acccaaatta gtcacattca ttccgagacc cgaaataaag aacaaatcga
      781 tgggtccgct cgggggaaag agatcgggcc gcagacttaa gccgatgaag gcgccttcat
      841 cgagaaacac atcccgaatc acaatctcac gccatgccga tgcgccatca atcgttgctg
      901 ctccgccaac catgatccat gaatatggcg cggcccaggg agtctttccg aaaaacgggc
      961 ggttgccata atcaatgaag cgcgttcccg taatggtgaa cccttgccat tggttaacct
     1021 gcacaactga tgtggtgatg ccgctgttcg tcgtgcaacc cagaaaagcg gagtcatgaa
     1081 tcttcagatt gcagtgatgg cttttgacga tggcgcctcc gctgacaaaa ctcgccaagc
     1141 cataaaactc acagtgctgg atggtcgcgt cgttgatgtc ggtcagtgtg agaaccactc
     1201 gcgcgtcggt cagaacagtt tcaaccccaa cgaacgcaat atcctgtatg aggaaacttt
     1261 ccagtcctga aattgcaata gcgtttgcag tgtctcccac cttcacaaca aattctgatg
     1321 aaagaccgag tccccggcca ggccctccgg attcaggcac cgggactgga gtctctccca
     1381 caatgacgac tgaagaggca aggcctgaga aatctttgga taccggtgtg ataagggcgt
     1441 aatgtccggc cggtacgaag agggtcccac cgcctgcagt tgcgagggca tcgagggcgg
     1501 cctgtaatgc ggggccatcg tcggcaacac catcaccgac cgcgccaaag tccatgagat
     1561 ttaaggtgac cgccgccacc gcggtgcttg agattttggg gttagttggc tggtggaatt
     1621 tagcggagga aactgcgttg ccggcaaaaa agccaaccag gatcagcaac caggatatcc
     1681 ggaaagcgcc attcttccag gtcatgagga tcgaatttct tgctgcgtcg aaattttaga
     1741 cgcatcgtta ttgaatcgcc taatactgcc aagaaaatat catgtaagtg actctaatca
     1801 acttcaaatt aggcgcatca gcgtgggagc atttcaggca tcacaacgtt tttgatatca
     1861 tgccaaacga cgattagaca agcagcttgc gaaaacttgt gtggtttttt gaagacgcag
     1921 gcttcctgac aattctttcg gagaaccaat cagccactct gttttgaagt tgtttcggcg
     1981 cacgctgagc ctcacatcca cgctaaggag ttgagtcctc aggccccgat gccgaaagaa
     2041 tgaacgtgtt gtgacatgaa aataagtgtg gtcatcccgg ttcgcaacga agaagaatcg
     2101 ctgccgattt tattggaagg cttaatgggc cagtcgcgcc ggcccgagga aattgtcatc
     2161 accgatggcg gctcaacgga ccgcacgccg cagatcatcg aagagtatat cgagcgtggc
     2221 gcgccaatcc acctggttag ggccggcatg gcaatgccag gacggggccg taatctggcc
     2281 gcagagcagg ccacttctga gtggctcgcc ttcaccgacg gcggaatgcg cgtagccggc
     2341 aactggctgg aggggatggc tgaacgcgcc gaacgcgaag gcgtcgacgt tgtttacggc
     2401 ggcatggacc cggtcgttga taccttcttc aaagagtgcg cggccatcgc gtatgtaaag
     2461 cctcccaaag agactagtgg aacccaggtt cgcccacaat ttatcgcttc cgcgctgatg
     2521 cggcggtccg tgtggcaagc cgtcggaggt ttcccggaac acctgcgttc agcggaagac
     2581 ctcctcttca tgaacaaagt aagcgaggct aaatttcgta cggtctttgc gccggacgca
     2641 aaagtttttt ggaaccttca gccgaccttc tggcgcacat ttaggcgctt ctacatttac
     2701 tcgcggcaca atattagagc cggattggct cggcagtggc acgcaaacat ttttacgcag
     2761 tacgcgatga ttctcctctg tgggttgccg gcgctggcat tcggttggca gtggtgggtc
     2821 gcagcgacca ttgcagtttg gcttctggca ctcacggccc gatcaatact ctccatcagt
     2881 cgcaaccgta gttgtcttcc ggccggcgtg tttcgcaacg cggcgcgaac agtaatgata
     2941 gtgccgctat tagcggtgat cgatctcgcg acgtttctgg gcacgattag ttggatcgtt
     3001 agagacaaac tgaatttggg aagcgcgagc gtaggcaccc ccaatggcgc ttaaaggcag
     3061 gagcgttctt tacatctcat ataacgggat gcttgacccg ctggggcaaa gtcaggtgat
     3121 tccatacctg cgtgagctga gcaaagccgg cgtgcgtttt acgttgctca gtttcgagcg
     3181 cggtaccgcc tggactgatg aggggctggc ccgatgtgcg aacctcaagc gagagttggc
     3241 cgcagaagga atcgagtggc actggttacg ctatcacaaa agattttcgc tgcccgcaac
     3301 cgtctacgat gtcctcgccg gaacccgtta cgcgcggggg ctggtgcgcc gcaatagcat
     3361 tgagatagtg cacgctcgca gccacattcc cgccacgatt gctctgtccc tcaaacagga
     3421 ctttggtctg aagatgatct tcgacgtgcg cggcctgctg gccgaagagt acgccgatgc
     3481 cggacattgg cagaagggga gcgcgcgcta ccgccttacc aaacg
//
LOCUS       DATDBY010000056         3220 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_113281, whole genome shotgun sequence.
ACCESSION   DATDBY010000056 DATDBY010000000
VERSION     DATDBY010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3220
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113281"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..846
                     /locus_tag="VIT19_01130"
     CDS             190..846
                     /locus_tag="VIT19_01130"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEY5837604.1"
                     /translation="MFDWLDAIARRVGGFIVGVPVYYAGPAMILIGALDSSLLSLPEI
                     NDYLVVARCYSHPKTAFFFPLFPAIGSVLGCLLLYTIFKRGGLAVLHRRFRADRVEKV
                     ERAYARFGVFALAIPALLPPPLPFKIFVATAGALQFPRRKFLLTILIARSIRYYVEGI
                     LAVYYGEAVLRFMKDNGLLIVSIVAAVAVIGLAIYLISRRGRKAVAEAKDVTRDSLKG
                     "
     gene            853..1482
                     /locus_tag="VIT19_01135"
     CDS             853..1482
                     /locus_tag="VIT19_01135"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEY5837605.1"
                     /translation="MKALIHKITGALGQISQYLISFGPFGLFAIAFLDSVMVPMPGGV
                     DAVLLLLAAARPTGLLIYVAAATIGSTIGCVALYRLSQRAGKKALSRFSESKQKRVKD
                     LLDRYDVMSVLVASLLPPPFPFKLFVVSAGVFRLNLMRFTLAVAGGRTFRYLLLGYLA
                     ARYGDQAKELLTRYYPAIGITLAVLIVLFFVAKALIRQSGKNEPSGVES"
     gene            complement(1465..2298)
                     /locus_tag="VIT19_01140"
     CDS             complement(1465..2298)
                     /locus_tag="VIT19_01140"
                     /inference="COORDINATES: protein motif:HMM:TIGR00573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease domain-containing protein"
                     /protein_id="HEY5837606.1"
                     /translation="MLRRNLVSDSTLIDETLELVRAQGGRTSFVAVAESIFLLSNIDR
                     ELAASMVSELVRNDPRFVLEPEHLTAAEDSNSALLRELEFVVVDVEATHERRKPARII
                     EIGAYRVRGDEILDKFETLINPEAVVPRFLTNLTGISTEMLLTAPKFAEVVDEWLDFI
                     GDAVLVAHNANFDLPLMNREIARVFPGYRLRNAHLCTVDLARRLVPRVESHGLDSLVA
                     YFGFEVSRRHRAADDALATARVFLRLLNDLSENGILTLAKARSFQAKLAAGELQLAFN
                     A"
     gene            2340..2912
                     /gene="pyrE"
                     /locus_tag="VIT19_01145"
     CDS             2340..2912
                     /gene="pyrE"
                     /locus_tag="VIT19_01145"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR01367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEY5837607.1"
                     /translation="MKQTEVLETFKRTSALLEGHFVLSSGLHSSVYLQCAIALQTPAV
                     TAQFGEAIADQFRGAGIETVASPAIGGLIIGYEVARQLGVRFIWTEREQGTMTLRRGF
                     TVREGERILVVEDVITTGGSTRDTIKALTGNGADVVGAASIIDRSGGEADVGVPRCSL
                     ATLNVPAVQPADCNACKRGESAIKPGSRAQ"
     gene            3008..>3220
                     /locus_tag="VIT19_01150"
     CDS             3008..>3220
                     /locus_tag="VIT19_01150"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: protein motif:HMM:NF013575.4"
                     /note="mediates pseudouridylation (positions 38, 39, 40)
                     at the tRNA anticodon region which contributes to the
                     structural stability; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEY5837608.1"
                     /translation="MNFKLLLQYDGTDFHGWQIQENLRTVQGELTRVLSLLDGREVVV
                     HGSGRTDAGVHAEGQVASVQLNREIAP"
BASE COUNT          654 a          877 c          951 g          738 t
ORIGIN      
        1 ctgcgattcg atttcgccgg catcaaaggc ctgacaagtc agagccctcg ctcaggactt
       61 accgtaggcg ttacgtacga cactccttca atcttcaaac cggcacaata aacgggtgac
      121 aggtaactgg tgacaggtga caggttggac tgcgaggttc atcccgtcac ctgtcacctg
      181 tgacggatta tgtttgattg gctcgacgcc atagcgcgac gcgttggagg tttcatagtc
      241 ggcgttccgg tttactacgc cgggccggcg atgattctga taggcgccct ggactcgtcg
      301 ctgctctcgt tgcctgaaat caacgactac ctggtcgtcg cgcgttgtta ctcacatccg
      361 aaaacggcct ttttctttcc gttgtttccc gcaatcggct cggtgctcgg ttgtttgctc
      421 ctgtacacga ttttcaagcg tggcggttta gcagttcttc atcgacgctt ccgcgccgat
      481 cgcgtggaga aggtcgaacg cgcatacgcg cgctttggcg tgtttgcact ggcgattccg
      541 gctttgttgc cgccgccttt gcccttcaag attttcgtcg cgacggccgg cgctttgcag
      601 tttccgcggc gcaagtttct gctgacgatt ctgattgcgc ggtcgattcg ctattacgta
      661 gaaggcatcc tcgcggttta ctatggcgag gccgtcctaa gattcatgaa agacaatgga
      721 ctgctaatcg tgagcatcgt cgcggcggtt gcagtaattg gacttgcgat ttatctcatc
      781 tcgcgccggg gcagaaaagc cgtcgccgag gcgaaggacg tcaccaggga ttcactgaaa
      841 ggctagttat ctttgaaggc attaattcat aaaattaccg gggcgctcgg acagatctcg
      901 cagtatttga tttcatttgg gccgttcgga ctgttcgcaa tcgcgtttct agattcggtc
      961 atggtgccga tgccaggcgg cgttgatgcc gtattgcttt tgttggcggc cgcgcggccc
     1021 acggggttgt taatttatgt ggccgcggcc accatcggtt caacgattgg gtgcgtcgct
     1081 ttgtatcggc tctcgcagcg tgccgggaaa aaagcgttat caagattttc agaatcgaag
     1141 caaaagcgcg tcaaggactt gctcgaccgt tatgacgtga tgtccgtgct ggtggcctcg
     1201 cttctgccgc cgccttttcc ttttaagctg tttgtcgtct cggcaggtgt gtttcggctg
     1261 aacctgatgc ggttcaccct ggcagtcgcc ggcggacgca cgtttcgtta tttgctgttg
     1321 gggtacctgg ccgcgcgtta cggcgatcag gcgaaggagt tactgacgcg ttattatccg
     1381 gcgatcggaa ttacgttggc ggtgctgatc gttctgttct tcgtcgcgaa ggcgttgatc
     1441 cggcagtccg gcaagaacga accatcaggc gttgaaagct agctgaagct cgccggcggc
     1501 aagcttggct tgaaaactcc gtgccttggc aagtgtgaga atcccgttct cagacaaatc
     1561 attcagcaag cggagaaaaa cgcgggcggt tgccagcgca tcatcggccg cacgatgccg
     1621 gcgcgaaact tcgaacccaa agtaagcgac cagcgaatca agcccgtgac tctcgacgcg
     1681 aggcaccagc cggcgggcca ggtcaaccgt acacaggtgc gcgtttcgca aacggtaacc
     1741 gggaaagacg cgggcgattt cgcggttcat gagcggcaga tcgaaattcg cgttgtgcgc
     1801 gaccagcacc gcatcaccga taaagtccag ccactcgtcc acgacttccg cgaactttgg
     1861 cgccgtcaac agcatttcag ttgaaatacc ggtgagattc gtcaaaaacc tcggcaccac
     1921 agcttccgga tttatcaacg tttcgaactt gtcgagaatc tcgtcaccgc gaactcgata
     1981 agcaccgatt tcgattatcc gtgccggctt tcggcgttcg tgagtcgctt cgacatcgac
     2041 aaccacgaac tcgagctccc gcagcagggc cgagtttgag tcttcggctg ccgttagatg
     2101 ctcgggctcc aaaacgaacc gcggatcgtt ccggaccagc tcgctgacca tcgaggccgc
     2161 taattcgcgg tcgatgtttg acaggagaaa gattgactcg gcgaccgcca caaagctcgt
     2221 gcggccgcct tgggcgcgta ctagttcgag agtttcatct atcagagtag aatcagaaac
     2281 aagattgcgt cgcaacatca ctgagcattg tacgcgacgg tgcaagcgtg gtgctaacta
     2341 tgaaacagac cgaggtgctg gaaacattca aacgaacgag cgcgctgctt gaaggacact
     2401 tcgtcttgtc gagcgggctg cacagttctg tctatttgca gtgcgcgatc gcgctgcaaa
     2461 ctccggcagt gactgcgcag ttcggagaag cgatcgccga tcagtttcgc ggagcgggaa
     2521 tcgaaacggt ggcgtccccg gccatcggcg gactcatcat cggttatgaa gtcgcgcggc
     2581 agctcggggt gcgattcatt tggaccgagc gcgagcaggg aaccatgact ttgcggcgcg
     2641 gcttcaccgt gcgtgagggt gaacgcatcc tggttgtcga agatgtgatt acgaccggcg
     2701 gctcgaccag ggacacaatc aaggcgctga ctggtaacgg cgctgacgtc gtaggtgcag
     2761 cttcaatcat cgatcgatcg ggcggcgaag ctgacgtcgg tgtaccgcgg tgctcgctgg
     2821 caacactgaa tgttccggct gttcagccgg cggattgtaa cgcttgtaaa cgtggtgagt
     2881 cggcaattaa acctggtagc cgcgcccaat gagtttggag tgcggcgact cgtcgccgct
     2941 ttcaagatgc gcgcgctcgg cgtttccatg gaactggaaa agcggtgaca agtccccgca
     3001 ctccaaaatg aacttcaaac ttctgctcca gtacgacggc actgactttc acggctggca
     3061 aatccaggaa aatctgcgaa ctgtgcaggg ggaactgacg cgggttctct cgttgcttga
     3121 cggtcgcgaa gttgtcgtcc acggttcagg gcggaccgac gccggcgtgc acgctgaagg
     3181 acaagtcgcc agcgtgcaac taaaccgcga gatagctccg
//
LOCUS       DATDBY010000057         3466 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1986574, whole genome shotgun sequence.
ACCESSION   DATDBY010000057 DATDBY010000000
VERSION     DATDBY010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3466
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1986574"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VIT19_01155"
     CDS             <1..283
                     /locus_tag="VIT19_01155"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HEY5837609.1"
                     /translation="LTVRDANRRLKLDLPEDSGYTTLAGFLMAQAGRLLQPNETVTYQ
                     DFVFTIQRVERRRIRRVGLRMPEPKQDVTMAVLPFIGGFAFEPFAASLL"
     gene            complement(359..3040)
                     /locus_tag="VIT19_01160"
     CDS             complement(359..3040)
                     /locus_tag="VIT19_01160"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY5837610.1"
                     /translation="MNKPVSKTEPVVVSDRAAALFVAHQQTIYRTTDRMFAVLMPVQW
                     LAGIAAALWISPRTWIGTTSETHFHVWAAIILGGVINLLPVTLALKKPGAAITRYSIA
                     TGQVLMSALLIYLTGGRIETHFHVFGSLAFLAFYRDWRVLVPATVVVAADHFLRGLIW
                     PESVYGVLAASEWRWLEHAGWVLFEDAVLFVAIRRNLAEMRDNALHTAELDYNEERYR
                     AVVEQTSEGVMLSNVETLGIVECNAAFANMLGYTVGEVLALTAYDFVVDQREAIEARV
                     AEYRREGVGTTGERRFQRKDGTVLNVEINMTVIAYGGKDVFCTIVRDISERKRAEEAL
                     RQAHEELEAKVQERTAELDQQRVFLRQVIDLNPSFIFAKDRQGRFTLVNHALAEAYGT
                     TVEDVLGKTGADFNQNGEEIAHFRRDDLEVIETRMERFIPEEVVTDAAGNVRWLQTIK
                     RPMVAVDGSVTQMLGVATDITQRKCAEEALRDSEGMLRQAQKMESIGTLAGGIAHDFN
                     NLMTAVTGYSELVLRRMPREEPLRSKVEEIRKAGERAASLTRQLLAFSRKQMLKPVVL
                     NLNTVITGIGKMLPRLIGEDIELRFDLNASLGQVNADPGQIEQVLMNLVVNARDAMPA
                     GGLLTVKTENVEFADRFGHHRMIVEPGRYVVLSVNDNGIGMDAETQSHIFEPFFTTKE
                     VGKGTGLGLATVYGIVKQSGGSIWVYSEPLEGTTFRIYLPRVDEVVATMDDESAAQRL
                     VGRGDETILLVEDEDIVRALAEEILLEYGYTVLTASNGKEGLKVSREFTEKIDLILTD
                     VVMPQMSGHELVENIRTARPETRVLYMSGFTDDAVVRHGVSAYELCFIQKPFSPESLA
                     IKVREVLDNHAAPDGGILPDSRFPGDLNTYRDHPVTR"
     gene            complement(3021..>3466)
                     /locus_tag="VIT19_01165"
     CDS             complement(3021..>3466)
                     /locus_tag="VIT19_01165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837611.1"
                     /translation="AHPKCPCTRASIEELSKLMTTSRGRLNAVVIFVTPNKASSEWQQ
                     TDLRASAARIPGVTTIVDAGGREASSFGALTSGQVVLYDAHGQLMFYGGITGSRGHIG
                     DNAGRTAIEALILGQSARNGNSQVFGCPLFDASECPIPNNEQASK"
BASE COUNT          724 a         1007 c          951 g          784 t
ORIGIN      
        1 gttgacggtg cgcgacgcga accggcgcct caaattggat ctgccggaag acagcggtta
       61 cacgactctg gcgggatttc tgatggcgca agccggacgc ttattgcagc caaacgaaac
      121 cgtaacttac caggattttg tttttaccat tcagcgcgta gagcgccggc gcatacgacg
      181 cgtgggtctg agaatgccgg aaccaaagca ggatgtaacg atggcggtgt tgcctttcat
      241 cggcggcttt gcgtttgagc cctttgcggc atccctactt tgattgtcgc ctgcgtagta
      301 ttagccacga cgagacggcg aaccagaaca cggccgccaa cactgcggcg catttgtctc
      361 atcgagtaac cggatggtcg cgataggtgt tgagatcgcc ggggaagcgt gaatcaggga
      421 gtatcccgcc gtcaggtgca gcgtggttat ccaacacctc gcgcactttg attgccagcg
      481 attcgggaga aaacggcttc tgaatgaaac acagttcata agccgatacg ccgtgccgta
      541 cgacggcgtc atcggtgaac ccagacatgt aaaggacacg agtttcagga cgggccgtgc
      601 gaatgttttc aaccaattca tggccgctca tttggggcat tacgacatcc gtgaggatca
      661 agtcaatttt ttcggtgaat tcgcgactga ccttcaggcc ctcttttcca ttcgacgccg
      721 tgaggactgt gtagccatat tccagcaaaa tttcttctgc gagagcgcgc actatatctt
      781 catcttccac gagcagaatc gtttcatcac ctcggcctac cagccgctgg gccgcgcttt
      841 cgtcatccat tgtagcgacc acctcatcaa cgcgcggaag atagatgcgg aaggtcgtgc
      901 cctcaagcgg ctcgctgtaa acccagatgc tgcccccgct ctgtttcaca attccgtaaa
      961 ctgtggcaag tcccaaaccg gtgcccttac ctacttcttt ggtcgtgaag aatggttcga
     1021 aaatgtggga ctgcgtctca gcgtccatgc cgatgccgtt atcattgact gagagcacca
     1081 cgtagcggcc cggctcaact atcatgcggt ggtggccaaa gcgatcggcg aattcgacgt
     1141 tttcagtttt taccgtcaga agtccgcccg ccggcatcgc atcgcgtgca ttcacgacca
     1201 ggttcatcag aacctgttct atctgacccg gatcggcatt gacttgcccc aaagacgcat
     1261 tcagatcgaa ccgcagctct atgtcttctc cgatcaaacg cggcagcatt ttcccgatgc
     1321 ccgtaataac tgtgttcaga ttgagcacaa ccggcttgag catctgcttg cggctgaagg
     1381 cgaggagttg gcgtgtgaga gaagctgcac gctcaccggc ttttctgatc tcttcgacct
     1441 tggatcttaa cggctcctcc ctgggcatgc ggcgaagtac gagttcactg tagccggtaa
     1501 cggccgtcat caggttatta aagtcgtgag cgatgccgcc ggccaacgta ccgatgctct
     1561 ccatcttctg cgcctgccgc agcattccct cgctgtcgcg caacgcttct tcggcgcatt
     1621 tgcgttgggt gatgtcggtg gccacgccga gcatctgcgt cacgctgcca tcgaccgcca
     1681 ccatcggccg cttgatcgtc tgtagccagc gcacgttgcc agcggcatca gtaacgacct
     1741 cttcgggaat aaatctctcc atccgcgttt cgatgacttc gagatcgtcg cggcggaaat
     1801 gtgcgatttc ctctccgttc tgattaaagt cagcaccggt tttgccgagc acatcctcaa
     1861 ctgtcgtgcc gtaagcttcg gcgagagcgt ggttaacgag tgtgaaccgc ccttggcggt
     1921 ccttggcaaa gatgaaactt ggattgaggt cgataacctg gcgcagaaac acgcgctgct
     1981 ggtcgagctc tgctgtgcgt tcctgtacct ttgcttccag ttcttcgtgc gcttggcgca
     2041 aagcctcctc agcccgttta cgttcgctga tgtcccggac aattgtgcag aacacgtctt
     2101 tgcctccgta ggcgattacg gtcatgttga tttcgacatt gaggaccgtg ccgtccttgc
     2161 gttgaaagcg gcgttcgccg gtcgtgccga cgccttcgcg gcggtactcg gcgacccggg
     2221 cctcgattgc ttcgcgttgg tcgaccacaa aatcgtaggc cgtgagggcc agcacttccc
     2281 caactgtgta gccaagcatg ttcgcgaacg ccgcgttgca ttcgacgatt cccagtgttt
     2341 cgacgttcga aagcatgacc ccttcggatg tttgctcgac gacggcacga taccgctctt
     2401 cgttgtagtc cagttcggct gtatggagcg cgttgtcccg catttccgcg agattccgcc
     2461 taatggcgac gaacaacaca gcgtcttcga acagcaccca ccccgcgtgt tcaagccaac
     2521 gccactcgct ggctgccaac acgccgtaga cggattcggg ccagatcagt ccacgcagaa
     2581 agtggtcagc agcgacgacg acagtcgcgg gcaccagcac tctccaatca cgatagaacg
     2641 cgagaaaagc aagcgagccg aaaacgtgaa agtgagtttc gatgcgtccg ccagtcaggt
     2701 agatcagcag tgccgacatc aacacctgtc cggtagcaat tgaatatcgc gtgatggcgg
     2761 cgccgggctt tttaagcgcc agggttaccg gcagaaggtt aataacaccg ccgaggataa
     2821 ttgcggccca cacgtgaaag tgcgtctcac tggtcgtgcc gatccaggtg cgcggtgaga
     2881 tccacaacgc cgctgcaatg ccggcgagcc actgcacggg catcagtact gcaaacattc
     2941 ggtccgtcgt gcggtaaata gtttgttggt gggccacgaa caatgccgcg gctcgatccg
     3001 acacgaccac cggttctgtc ttacttactg gcttgttcat tattcgggat ggggcattca
     3061 gaggcgtcaa atagtggaca gccgaacacc tggctatttc cgttgcgcgc gctttggccc
     3121 agaatcagcg cctcaatcgc agtacgcccg gcgttgtcgc cgatgtggcc acgcgaacca
     3181 gtgatgccgc cataaaacat cagttgaccg tgagcgtcat acaacacaac ctgacccgaa
     3241 gtgagcgcac cgaagctcga agcttctcgc ccaccggcat caacaattgt agtgacgcca
     3301 ggaatgcgcg cggcactggc tcgtaaatcc gtctgttgcc attccgatga agctttgtta
     3361 ggcgtaacga agatcacgac tgcgtttagt cgtcctcgac tggtggtcat cagtttggat
     3421 aactcttcaa tgctggcccg cgtacaggga cacttagggt gggcca
//
LOCUS       DATDBY010000058         2625 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1777020, whole genome shotgun sequence.
ACCESSION   DATDBY010000058 DATDBY010000000
VERSION     DATDBY010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1777020"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VIT19_01170"
     CDS             complement(<1..295)
                     /locus_tag="VIT19_01170"
                     /inference="COORDINATES: protein motif:HMM:NF021371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2071 domain-containing protein"
                     /protein_id="HEY5837612.1"
                     /translation="MKDRKHLTDLERLAIRERPHGQSLMHQTWGKLLFMHWRIEEKLL
                     RPLIPEQLEIDTFDGTAWIGIIPFTMWDIRALPPFVPPVPGLSSAHELNVRTYV"
     gene            complement(457..894)
                     /locus_tag="VIT19_01175"
     CDS             complement(457..894)
                     /locus_tag="VIT19_01175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837613.1"
                     /translation="MPGWLKVLLIILLVGILLVVGVIAAGGIWFYRNKDALKAKLDTV
                     TTEARDFGKNTDNQGCVNETISRYKTGPGITSAMSNAIFVRICLDNSRSTPGFCESVP
                     KQREFTRTAQWQKEQCQRAGLERDSFCASLFTPIQQFCEKPGQ"
     gene            complement(983..1402)
                     /locus_tag="VIT19_01180"
     CDS             complement(983..1402)
                     /locus_tag="VIT19_01180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837614.1"
                     /translation="MRGWLKAILIIAVVVILLVVGVVGAGVFWWMRNKDGLRANATEG
                     KEFGKTTDNQGCFGEAVKRYKKAPGFLAAMSNQGFLTRCLEVSRPTNGFCENIPLGDL
                     AKMTEWRESQCRRYDLRSSIDCQTLTMPVVMFCGDKK"
     gene            complement(1429..>2625)
                     /locus_tag="VIT19_01185"
     CDS             complement(1429..>2625)
                     /locus_tag="VIT19_01185"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEY5837615.1"
                     /translation="GKSILYRSQATAGFEADRWRLMSYDRASGTSRELLRGFNLSVED
                     VVPSPDGGTIYFSTGERGRHTVYRVPVSGGAAQKVLNNVFATNLGITSDGRTLVFANS
                     TLAAPPDVYRANVDGSGLTPITRVNADLMSRADIKPAEEMEWTGALNQKVHGFLLKPR
                     NFDATRRYPLLVLIHGGPQGAWNDTWSYRWNPQIFTDAGYVVFMPNPRGSTTYGQQFT
                     NEISGDWGGKVFIDLKNGIAEVLRRNSYVDRNRIGAAGASYGGYMVDWILGHNTDPRF
                     RFKTLVSHAGVYNLTSMYGATEELWFPEWEFKGTPWTNKAMYERWSPHNFAGNFNTPT
                     LVTAGELDYRVPYTESLQLYTALQRRNVPSKLLMFPDEGHWILKPQNSKLWYNTVLDW
                     LNKYLK"
BASE COUNT          565 a          742 c          706 g          612 t
ORIGIN      
        1 gaacgtaagt gcgcacgttc agctcatgtg ccgagctcaa acccggcacg ggcggcacga
       61 acggcggcag ggctcgaatg tcccacatcg taaagggaat gattccgatc caggcagtgc
      121 cgtcgaaagt gtcaatttca agttgctctg gaatcagcgg acgcagaagt ttttcttcga
      181 tgcgccaatg catgaagagg agcttgcccc aggtctgatg cattaaagac tggccgtgcg
      241 gccgctcgcg gatggcgaga cgttctaaat cggtaaggtg ttttcggtct ttcatgaatc
      301 taactttgcg ttcctttgcg acttggcgcc tttgcgtgaa cccattctca cgccaagacg
      361 caaaggcgca aagaatcgca aagaaatacc gcggccatca cagttgaacg gcgatccggt
      421 cgctaccgct ctcggtactg acacggactg cctcggtcac tgtccgggct tttcgcagaa
      481 ctgctgaata ggggtgaaga gactcgcgca aaaactgtca cgttccagcc cggcccgctg
      541 gcattgctcc ttctgccatt gcgcggtcct cgtgaactct ctttgcttcg ggacgctttc
      601 acaaaacccc ggggtggagc gactgttgtc cagacagatg cggacgaaga ttgcgttcga
      661 catggctgag gtaattccgg gcccagtttt gtaacgcgag atcgtctcgt taacgcagcc
      721 ctggttgtcc gtgttcttac caaagtcgcg cgcctcagtt gtgacggtgt cgagtttcgc
      781 tttcagcgcg tctttgttgc gatagaacca gataccgccg gcggcaataa cgccaaccac
      841 taacagaatc cccaccagta aaataattag taggactttg agccagccag gcatttcgtt
      901 aacacctccg atcgatttat gaatcggcgt taatggtcaa gatgcgtcca acactaaatg
      961 agtgtcagtt ttgggtttgg gtttactttt tatctccgca gaacataact accggcatgg
     1021 tcagcgtctg acagtctatg ctgcttcgaa gatcgtaccg cctgcattgc gactctcgcc
     1081 actccgtcat ttttgctaag tctcccaacg ggatattttc gcagaacccg tttgtcggac
     1141 gactgacttc aagacagcgg gtcaggaatc cctgattgct cattgcggca aggaagcctg
     1201 gagctttctt gtatcgctta acagcctcgc cgaaacaacc ctgattgtct gtggtttttc
     1261 caaactcttt gccctcagtg gcgtttgccc gcaaaccgtc tttgtttcgc atccaccaaa
     1321 agacgccggc gcccaccacg ccaacaacaa gcagaataac tacgacggcg atgatgagta
     1381 tcgctttcag ccagccacgc acggacgtcc tcctgggtta gaagactctc acttcagata
     1441 cttattcagc cagtctagca ccgtgttgta ccacagcttc gagttctgcg gtttcagaat
     1501 ccagtgaccc tcgtccggaa acatcaacag ttttgacggc acgttgcggc gttgcagtgc
     1561 cgtgtagagc tgcaaacttt cggtgtaagg cacgcgatag tcgagttcgc ccgcggtcac
     1621 cagcgtcggc gtgttgaagt tcccggcaaa gttgtgcggc gaccagcgct cgtacatggc
     1681 tttgttggtc cagggagtcc ctttgaattc ccattcaggg aaccagagct cttcagtcgc
     1741 gccgtacatg ctcgtcaggt tgtaaacgcc ggcgtgtgac acgagcgtct tgaagcggaa
     1801 ccgcggatcg gtgttgtgcc cgagaatcca atcgaccatg tacccgccgt acgacgcccc
     1861 ggcggcgccg atgcgattgc gatcgacgta cgagttgcga cgcagaactt cagcaatacc
     1921 attcttgaga tcgatgaaga cttttccgcc ccaatcgccg ctgatctcat ttgtgaattg
     1981 ctgcccgtag gtggtggatc cgcgcgggtt tggcatgaac accacgtaac ctgcgtcggt
     2041 aaagatttgc gggttccagc gatagctcca ggtatcgttc caggcgccct gcggcccacc
     2101 gtgaatcagg acgagcaaag gataacgcct ggtcgcgtcg aagttgcgcg gcttgagcag
     2161 aaagccgtgt accttttgat tgagcgcgcc tgtccattcc atttcctcgg caggtttaat
     2221 atccgcacga gacatcaggt ccgcgttcac gcgcgtaatt ggcgtcaagc cactgccgtc
     2281 aacattcgcg cgataaacat caggcggcgc cgcgagcgtg ctgttggcga agaccagcgt
     2341 gcgaccatcc gaggtgatcc ccagatttgt cgcgaagacg ttgttcagca ctttttgcgc
     2401 cgcgccaccg ctgactggaa ctctgtagac ggtgtgacgt ccgcgttcac cggtgctgaa
     2461 ataaatcgtg cctccgtcgg gagacggcac gacatcttca acactgagat tgaaaccgcg
     2521 cagaagttcg cggctcgtgc cgctcgcgcg gtcataactc atcagacgcc agcgatcagc
     2581 ttcgaaaccc gccgtagctt gtgatcgata aagaattgat ttgcc
//
LOCUS       DATDBY010000059         2298 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2994839, whole genome shotgun sequence.
ACCESSION   DATDBY010000059 DATDBY010000000
VERSION     DATDBY010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2994839"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..450)
                     /locus_tag="VIT19_01190"
     CDS             complement(<1..450)
                     /locus_tag="VIT19_01190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837616.1"
                     /translation="MTPARAIDKRPKKWILRSRDAAEVREFAKELGVSPIVAGLLLSR
                     GYGNLKAAERFLKPTLEQLHDPMLMRGMTEAVARVLHAIDQHQPILIYGDYDVDGTTG
                     TAVLLRALRMLGATCGYHVPHRFTEGYGIQQPALEKAASEGYKLVVSV"
     gene            complement(605..1483)
                     /gene="uppP"
                     /locus_tag="VIT19_01195"
     CDS             complement(605..1483)
                     /gene="uppP"
                     /locus_tag="VIT19_01195"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: protein motif:HMM:NF001392.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphatase UppP"
                     /protein_id="HEY5837617.1"
                     /translation="MTLFQAILLGIVQGLTEFIPISSTAHLVLAMRAMDLALTPEQAT
                     ASMAVIQLGTLLAVLVYFAGDIWRITRAFVHDHLVILKDGRRDQFNRENEHARLSTDA
                     WLGWLIIIGTIPVVIVGLIFKKQIEGSFTKNLWIIATMMIVVALLLIVAEVVGKRKRR
                     LQDLGLGDAIAVGLAQCLALMPGSSRSGSTMMAGLFVGQTRETAARFSFLLSIPAIAA
                     SGLLELFEAVHKLPSGSLANLAVGTVVSAVVGYLSIWFLLRFLRTHSTGVFIGYRILV
                     GGAILVMLLAGRLTGL"
     gene            1670..2182
                     /locus_tag="VIT19_01200"
     CDS             1670..2182
                     /locus_tag="VIT19_01200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837618.1"
                     /translation="MEVIRKIFTVGYSGIIVLFFCCAVALIFFAALELWHGINPNAVL
                     PLRDRFNSILESIGLLTIAVVALELGQTIIEEEVQRKVQASSPTRARRFVSRFLVVVV
                     VALSIESLVAVFKLAHEDPSRLPQAAMVGIAAGVLLASWGVFIRLNRSAEELEPEAME
                     ETKSEDRKVK"
BASE COUNT          531 a          631 c          633 g          503 t
ORIGIN      
        1 gacgctgacc accagcttgt atccttcgct cgccgccttc tccaacgcgg gttgttgaat
       61 gccataacct tcggtaaagc gatgcggcac gtgatagccg cacgtcgcgc cgagcatccg
      121 caaagcgcgc agtaacaccg ccgtgcccgt cgtgccgtcc acatcgtaat cgccgtaaat
      181 cagaatcggc tgatgctgat cgatggcgtg gagcacgcgc gccacggctt cagtcatgcc
      241 gcgcatgagc atgggatcgt gaagctgttc gagcgtaggt tttaagaaac gttccgcggc
      301 ttttaagttt ccgtaacccc gcgataagag caggccggcg actatcggcg agacacccag
      361 ttcctttgcg aattcgcgga cttcagcagc gtcgcgtgaa cgcagaatcc acttcttcgg
      421 ccgcttatca atcgcgcgcg cgggagtcat ggcgggagtt tacttgttgt tttgcgtaag
      481 ggctaattat ttggagtgcg ccggcttgac ggcgcttttt ctgacgactt tcgtcgaagg
      541 actgacggct ttcgtcgacg gactagagca ggaagaaagc ggcgtcaaac cgccgcactc
      601 caaatcacaa acccgtcaac cgacccgcca gcagcataac caggatcgct ccaccaacca
      661 gaatgcgata tccaatgaag actccggtcg agtgcgttcg cagaaaacga agcagaaacc
      721 aaatcgagag ataacccaca accgcgctca caactgtgcc gacggcgaga ttagccaggc
      781 ttcccgatgg cagcttgtgt accgcctcaa acaattccaa caagccgctg gcggcgatgg
      841 ccggtataga aaggagaaag gagaatcgcg cggccgtctc gcgtgtttgc ccgacaaata
      901 gtcccgccat catcgtcgaa cccgagcggc tcgatccggg catcaaggcc aggcattgag
      961 cgagtccaac ggcgatcgcg tcacccagac cgaggtcctg aagtcgcctt tttcttttgc
     1021 caaccacctc agccacgatc aatagcagcg ccacgacgat catcatcgtc gcgatgatcc
     1081 aaaggttctt ggtgaacgaa ccttcgatct gtttcttaaa aatgaggccg acaatgacga
     1141 cgggaattgt gccaatgatg atcagccagc cgagccacgc atcggtcgaa agccgcgcat
     1201 gttcattctc gcgattgaat tgatcgcggc ggccgtcttt caagatcacc agatgatcgt
     1261 gaacgaacgc gcgcgtgatt ctccagatgt ccccggcaaa ataaaccaga actgccagca
     1321 acgttccgag ttgaatcaca gccatcgacg ccgtcgcttg ttccggcgtg agggccaaat
     1381 ccatcgcgcg catcgccagc acgaggtgcg ccgtcgaact gatgggaatg aattcagtta
     1441 agccctggac aatgccgaga aggatcgcct ggaacaaggt catgtctggt tttagctttg
     1501 gatcttacta atctggattt gaagagctgg atgtgccatg cgagccggca gagtataaac
     1561 taactttgct gtgagttgta tgattagttt gatgacgcag aaacggcaac tcatctatgt
     1621 tctccgcagc aacagataat ttatcaagtc atataggagg cttttcggcg tggaggtcat
     1681 tcgaaaaata tttactgtcg gctactctgg cattattgtc ctgttctttt gttgcgccgt
     1741 ggccttaatt ttctttgccg cgctggaact atggcacgga atcaacccaa acgcggtttt
     1801 gccgctccgc gaccggttta attctatcct tgagagcatc ggattattga ccatcgcggt
     1861 ggtcgcgctc gaactcggcc aaacaatcat tgaagaggag gtgcaacgga aggtacaggc
     1921 cagcagtccc acccgcgcgc gccgcttcgt ttcgcggttc ctggtagtcg tggtcgtggc
     1981 gctttccatt gaatcgttgg tcgccgtatt taaactcgct cacgaagatc cctcacggtt
     2041 accccaagcc gcgatggttg gaattgccgc cggcgtgctg ctcgctagtt ggggagtctt
     2101 tattcgtttg aaccggagcg ctgaagagtt ggagccggaa gcgatggaag agaccaagag
     2161 cgaggatcga aaggtcaaat agcgacgcga ttgcctttac tctcggaacg aatttctctg
     2221 cgagatccag tcgtacatgg cgttcggcat gatcatgccg gcgcgaacga tggtggcgag
     2281 ctgccaggga aaggcgta
//
LOCUS       DATDBY010000060         5187 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_956256, whole genome shotgun sequence.
ACCESSION   DATDBY010000060 DATDBY010000000
VERSION     DATDBY010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5187
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_956256"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(150..1067)
                     /locus_tag="VIT19_01205"
     CDS             complement(150..1067)
                     /locus_tag="VIT19_01205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837619.1"
                     /translation="MSWLGFELSVLRRLKFQSVALPIAGEPYLGQYLKRLNVTVAAND
                     PAEWAWTKSTAFIENNSEVLTEADIDLVLADAYVPANYFKNATLLSWFNETDAWWFDN
                     VRASAEKLQSPYKRALALTLGMAVGDYVFSFNLETRDLRQPLSLSNVFRRLWRTLPPP
                     VDNRLRNKSTNAPVRSFVAETFDTDLLFLRLPHPLRATDSRNSRVLSWREEWLRQSRA
                     SRDNGHFGSGRLAAPVETKEQYLRLVEDLLHIAAHVPTWAIAGISDGFISTDELVECV
                     ADARRIDAVYTKDFSELLGLKAVIITAGA"
     gene            complement(1102..1782)
                     /locus_tag="VIT19_01210"
     CDS             complement(1102..1782)
                     /locus_tag="VIT19_01210"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEY5837620.1"
                     /translation="MPLIETNDVDQVATIEIFRDLAAEADQFEQYSNPHAPRVAAIAE
                     EIGKSFSLGTRDRFSLRVAALAHDLGEAAMARDYIKRQGPLSDDERIDLARHPVLGER
                     AAAEAGADRGSQLLVRWHHEWWNGGGYPDGLRFEQIPLGARILRVADAYAALTDDRPF
                     RPALSEKQAREHLLEWIGLEFDPGVVKALLSLEPFNELRSYYKEDTPPDLPGIADDLM
                     ERIDHLGT"
     gene            complement(1795..3249)
                     /locus_tag="VIT19_01215"
     CDS             complement(1795..3249)
                     /locus_tag="VIT19_01215"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEY5837621.1"
                     /translation="MTKPTKGQLAQKPVAELIREVGEASASGALRLSRDRAKAVVYFE
                     NGDVAFAASNIRAHRLVEFLKRTGILDEGAVGALPPKATDDEVLKILVESRRIRADRV
                     GTIRANHVGEVLRGVLLWTDGDWQFDPRVRIAGDTRVAIDVRRLLLESTRHLPATYLS
                     SRFADTSERLELAQANGQHPSLLPAEAFVLSRINGPTTVNELLSVSGMNEEETLQSLY
                     ALAICGVVKRAAWATPQFDSNAGANAAVKSEAVADDKIDTLEGFFGRVEQAASYYDLL
                     GVGHQASADEVKNAYHSLARRYHPDRFHQADAQLRNQIESAFARVAQAYEVLGDQSSR
                     TSYDAQFAVPASPSASKAATRERSPASPKAPAESRAESSFQKGVAAINQRQPQQALRF
                     FAEAASIEPRCARYRAEYGRVLINDPKTRRLAEFELKAAIALEPDNTSYRVALAELYK
                     ALGLRRRAEGELQRALTVDPKNAAARTLLASLKQ"
     gene            complement(3331..4284)
                     /gene="xerC"
                     /locus_tag="VIT19_01220"
     CDS             complement(3331..4284)
                     /gene="xerC"
                     /locus_tag="VIT19_01220"
                     /inference="COORDINATES: protein motif:HMM:NF001399.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEY5837622.1"
                     /translation="MLAQLTTQFLDHLRYERNVSVHTLRNYESDLQQFVAYLVPPDAD
                     AANRNGKKRAAAPPPEPDIKQIDHITIREWLASLHSDRKKKSSIARKLAALRTFFQFL
                     VREGVIESNPAKLVATPRKEKKLPVHLSVEDAVRFIETPDADTHFGKRDRAILELLYA
                     TGMRVSELVQLNLRDIDFSNKLLRVFGKRRKERIVPFGDPAAKALRDYLSVREQFLMN
                     APATKRDAQPLILNYQGTRMTTRSVGRLIEKYIKLCAGIHDISPHALRHSFATHLLDS
                     GADLRDIQALLGHARLSTTQVYTHVSMEKLIEVYDKTHPKA"
     gene            complement(4290..4622)
                     /locus_tag="VIT19_01225"
     CDS             complement(4290..4622)
                     /locus_tag="VIT19_01225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837623.1"
                     /translation="MPLSEKVRIEIFIPDLPDPIYARILEGLGDELTYAFGGCTIVAT
                     DGKYRSSEGLILPDKVNLLFSDTSFNWQPDRLTIELYVERIRTVVQRALDREESVLVV
                     VYPVYHAA"
     gene            complement(4765..>5187)
                     /locus_tag="VIT19_01230"
     CDS             complement(4765..>5187)
                     /locus_tag="VIT19_01230"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5837624.1"
                     /translation="RPFSGRRVIVIVSDGRDTTSRHDHDFDATLKRLQGDECQIYVVQ
                     TGLYDNANVRDLAAERRMHEFAAQTGGAVYIPKNVDDLEIAFAQIAADLAQQYVLSYY
                     PPEDKRDGRYHNISIRVKDKSNLRIRARKGFLVKKRTV"
BASE COUNT         1046 a         1527 c         1480 g         1134 t
ORIGIN      
        1 ggagggccgg cccgtcctgt gcggcgagtg ctttgccgcc agccgcgctc aacgcggcgc
       61 ttaacgtgta acgcaagttg ttaacttgcg caccactcga tccagaatca accacaggca
      121 gaacgcaagt ttgcaacttg cgctacgctt cacgcgcctg ccgtgatgat caccgccttt
      181 aatccgagca actccgaaaa atccttcgtg taaacggcgt cgattcttcg tgcgtccgcg
      241 acgcactcaa ccagttcatc ggtcgagata aatccgtcgc taatgccggc gatggcccac
      301 gtcggcacat gggccgctat gtgcagcaga tcctcaacca gcctcaaata ctgttccttt
      361 gtttcgaccg gcgccgccaa acgcccgctg ccgaaatgcc cgttgtcgcg ggaagcacgc
      421 gactgtcgca gccactcttc gcgccacgaa agcacccgcg agttgcgact gtcggtcgcg
      481 cgcagcggat gcggcagccg gagaaaaagc aaatccgtgt cgaatgtctc ggcgacaaaa
      541 cttcgcaccg gcgcgttggt gcttttgttt cgcagccggt tatcaactgg cggcgggaga
      601 gtgcgccaca accgccgaaa gacgtttgac agcgatagag gctgacgcag atcacgggtt
      661 tccagattga acgagaaaac gtagtcgccc acggccatcc ccagcgtgag cgccagggcg
      721 cgcttgtacg gcgactgaag cttctcggca ctcgcgcgca cgttatcgaa ccaccacgcg
      781 tcagtctcgt tgaaccagga gagcagcgtg gcgttcttga agtagttggc cggcacgtac
      841 gcgtcggcca gcaccagatc gatgtcggct tccgtcaaaa cttcagagtt gttttcgatg
      901 aaggccgtcg actttgtcca ggcccattcc gccgggtcgt ttgcggcgac agtcacgttc
      961 aagcgcttca agtactgccc aagatacggc tcgcccgcga ttggcagcgc cacggactga
     1021 aatttcaaac ggcggaggac gctcagctcg aacccgagcc agctcatgcc gccagtattt
     1081 ataccgttct gagtgtgcaa actatgtccc caggtggtcg atgcgctcca tcagatcgtc
     1141 ggcgatgccc ggcagatccg gaggcgtgtc ctctttgtag tagctccgca attcgttaaa
     1201 cggttccagc gaaagcagcg ctttgaccac tcccggatcg aactccaaac caatccactc
     1261 gagcagatgt tcacgcgcct gtttctccga gagcgcggga cgaaacggcc gatcatccgt
     1321 caaagcagcg taagcgtcgg cgacgcgcaa aatgcgcgct ccgagtggta tctgttcgaa
     1381 acgcagaccg tcggggtatc caccgccgtt ccaccattcg tgatgccagc gaaccagcag
     1441 ttgcgagccg cgatcagctc cggcttcggc cgccgcgcgc tcgcccagca ccggatgccg
     1501 tgcgagatcg atgcgctcgt cgtcactcaa tggcccctgt ctcttaatgt agtcgcgcgc
     1561 catcgccgcc tcgccgaggt cgtgcgccag tgcggcaacg cgaagcgaaa accggtcgcg
     1621 tgtccccagg ctgaatgact tgccaatttc ctcggcgatc gccgcgaccc gtggcgcgtg
     1681 cggattcgaa tattgctcga actgatcagc ctcagccgcc aggtccctga aaatttcaat
     1741 cgtcgcgact tgatcgacgt cgttggtttc aattagcggc atagattcgt cgtgtcactg
     1801 tttcagactc gccagtaaag ttcgcgccgc ggcgtttttt ggatccaccg tcaaggcgcg
     1861 ttgcaattcg ccttcagcgc gacggcgcag cccgagggct ttgtaaagtt ccgcgagcgc
     1921 gactcgatac gaagtgttat ctggctccag ggctatggct gctttcagtt cgaattcggc
     1981 cagccgcctc gtcttcggat cgttgataag cacccgcccg tattcagcgc ggtagcgcgc
     2041 gcaacgcggt tcgatactcg cggcttcggc aaagaacctg agcgcttgct gcggctggcg
     2101 ctgatttatc gccgcgacac ctttttgaaa actcgattcc gcgcgactct ccgccggtgc
     2161 tttcggagaa gccggcgaac gttcgcgggt cgctgctttt gaagcggacg gagatgccgg
     2221 aaccgcaaac tgtgcgtcat aagaggtacg tgacgactgg tcacccagca cctcgtaagc
     2281 ttgcgcgacg cgggcgaagg ccgattcgat ttggttccga agttgcgcgt cggcctggtg
     2341 gaaacggtcc gggtgatagc ggcgcgccaa agaatggtac gcgttcttga cctcgtcagc
     2401 gctcgcctgg tgacccacgc cgagcaggtc gtagtaactg gctgcttgtt cgacccggcc
     2461 aaaaaaacct tcgagcgtat cgattttgtc atcggcgacg gcttcgcttt tcaccgccgc
     2521 atttgcaccg gcattgctgt cgaattgcgg ggtcgcccac gccgcgcgct taacgacacc
     2581 acagattgcc agggcgtaaa gcgactgcaa cgtttcttcc tcgttcattc cgctcaccga
     2641 cagcagctcg ttgaccgtcg tcgggccgtt aatgcgcgag agcacgaaag cttcggccgg
     2701 caacaaactt gggtgctggc cattggcttg cgcgagttcg agtcgctcag atgtatctgc
     2761 aaagcgtgac gaaagataag ttgccggcaa atgccgcgtc gattccagca agagccgtcg
     2821 cacatctatc gccacgcgcg tgtccccggc gatgcggaca cgaggatcga attgccagtc
     2881 accatcggtc caaagcaaaa caccacgcag aacttccccg acatgattcg cccgaatggt
     2941 accgactctg tcggcgcgaa tgcggcgact ctctacgagg atcttcagaa cttcatcgtc
     3001 ggtcgctttt ggcgggagcg cgcctaccgc gccttcgtcc aggatgccgg tgcgcttcag
     3061 aaattcgacc aggcgatgtg cgcgaatgtt cgaagccgcg aaagcgacgt cgccattctc
     3121 gaaatacaca actgctttcg cccggtcgcg cgagagtctg agcgcgcccg aggctgaagc
     3181 ttcgccaacc tcacgaatca gttccgcgac aggtttctga gcgagctggc ctttggttgg
     3241 cttggtcatg tttgcgcgtc ggccaatcgg aaatcataac gcacggcttc cgtggtgcgg
     3301 aagccacaat ctctaccgag cgcgagcgag tcaggcttta gggtgagttt tgtcgtagac
     3361 ctcgatcaac ttttccatgg aaacgtgcgt gtagacctgc gttgtcgaaa gccgggcgtg
     3421 gcccagcaag gcctggatgt cccgcaggtc ggcgccgctg tccagcaggt gcgtggcaaa
     3481 tgaatgacgc aacgcgtgcg gactgatgtc gtgaatcccg gcgcacagct tgatgtactt
     3541 ttcgatcaaa cggccgacgg agcgggtcgt cattcttgtg ccctggtaat tcaggattag
     3601 cggctgcgcg tcgcgctttg tggccggcgc gttcatcagg aattgctcgc gtacggaaag
     3661 ataatcccgc aaagccttcg cggcggggtc gccgaagggc acaatccgct ctttgcgtcg
     3721 cttgccgaaa acccgcagca gcttgttact gaaatcgatg tcgcgcaggt tcaattgcac
     3781 cagctcagac acgcgcatgc cggtggcgta aagcaattcc agaattgcac ggtcgcgttt
     3841 gccaaaatgc gtatccgcgt caggcgtctc aataaatcga actgcgtcct cgacagacaa
     3901 gtgaaccggc agcttctttt ctttgcgggg agtcgcgacc agtttcgccg ggttggattc
     3961 aatcacgcct tcgcgtacga gaaactgaaa aaaagttcgc aaggccgcca gcttccgggc
     4021 gatcgatgat ttctttttcc ggtccgagtg cagcgacgcc agccattcac gaatcgtgat
     4081 gtgatcgatc tgcttgatgt cgggttcggg aggtggggcc gccgctcgtt tcttgccatt
     4141 gcggtttgct gcatcggcat ccggtggaac caggtaggcg acaaactgct gcaagtcgct
     4201 ttcgtagttg cgcagcgtgt gaacgctgac gttgcgttca tagcgcaggt gatcgagaaa
     4261 ctgcgttgtt aactgagcca acatacgatt cacgcggcgt gataaacggg atacaccacg
     4321 accagcacgg attcctctcg atccagggct cgttgaacca cggttcgaat tcgttcgacg
     4381 taaagctcga tcgtcaatcg atcgggctgc cagttaaagg acgtatcaga aaaaagtaaa
     4441 ttgaccttgt caggaagaat caatccctca gacgaacggt acttgccgtc ggtcgcaacg
     4501 atggtgcagc caccaaaggc gtaggtgagt tcatccccga ggccctctag aattctcgcg
     4561 tagattggat caggtaaatc aggaatgaag atttcgatgc gaaccttctc ggatagcggc
     4621 aacgagcttc tccatgcgtt ttgggaacga tttgacgcgt ttcaaggttt cttcccgcgt
     4681 gagcttctct cttttcggtc gctcaatctt tactttcact tgttttgcac gatttctcat
     4741 ggcctgaacc ttgaacgtaa tctactacac ggttcgtttt ttgactagaa atcccttgcg
     4801 cgcgcggatc cgcagattgc ttttgtcctt cacgcgaatg gaaatgttgt gatagcgacc
     4861 gtcgcgtttg tcttcgggcg ggtagtagct cagcacgtac tgttgtgcca gatcagcggc
     4921 aatctgcgcg aaggctattt ccagatcgtc aacgttcttc ggaatgtaaa ccgcgccgcc
     4981 cgtttgcgcc gcgaactcat gcatgcggcg ttcagccgcc aggtcgcgca cgttcgcgtt
     5041 gtcatagagt ccggtttgca cgacataaat ttggcattcg tcgccttgca gccttttgag
     5101 cgttgcatcg aaatcgtgat cgtgacggct ggtcgtgtcg cggccatctg aaacaatcac
     5161 gatcacgcgc ctgccgctga acggtct
//
LOCUS       DATDBY010000061         4470 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2644859, whole genome shotgun sequence.
ACCESSION   DATDBY010000061 DATDBY010000000
VERSION     DATDBY010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4470
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2644859"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..619
                     /locus_tag="VIT19_01235"
     CDS             <1..619
                     /locus_tag="VIT19_01235"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5837625.1"
                     /translation="LLAVGRLSREKGHADLIESIALLRATEPDLKTKLLIVGEGPEQA
                     NLARAVSEQNIASQVVFVGHVTDVAPFYAIADVLALPSHSEGSPNVLLEAMAAGLPVV
                     ANSVGGVPEIATSEVNALLIPARDPSAFAEALRRMLTEVELAPTLKNNAIARAREFSP
                     ESHAQSLIEIYEELISATGAQASRLHGRSLQPRKRGRLRSSQTDA"
     gene            622..1572
                     /locus_tag="VIT19_01240"
     CDS             622..1572
                     /locus_tag="VIT19_01240"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HEY5837626.1"
                     /translation="MRVSVIIPLFNKAPFIERALRSVAAQTFADFEIIVVDDGSTDDG
                     LTSVEKFTDSRLRIVRQENAGPGAARNRGLREARGDFVAFLDADDEWLPEYLAESLHS
                     LDEPGSKAAAVVSGYFEHPAGVSRDEMWRRRGLRDGEMRLSGETEPSLAIALLAYMTP
                     CTTVARTEVLRKHGGFYERDLCAYGEDAHLWLKLLLNESVSVNLKPLARIHFEASGAT
                     QTRRSVRPVEPFLRDPDEIKSSCPPHLRELLSRVLATRALKTACMLGYWGRWREAREI
                     VKRFRAPGRWRLPYYAPSLICRTPFGSALGKVSRMVLSAE"
     gene            1592..2404
                     /locus_tag="VIT19_01245"
     CDS             1592..2404
                     /locus_tag="VIT19_01245"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5837627.1"
                     /translation="MTNSESVLVENLLSRPEMHRQWARDYRTDDNERFYEQAFDFIAG
                     RLKPEPGTTFLDAGCGSCAHSVRLARRGFKVHAVDFSESALRMALQFVREKGVQDRIT
                     LGRESLLELSFPDQSFDYVLCWGVLMHIPDVKRAVAELARVLKPGGALVISEGNKSSL
                     EAVAMRNLKRVLRREKAQVKDTPAGVEYWKEKDGDALVTRQANIRWLIQELDQHGLSL
                     TTRAPGQFTESYRMTSAPRLKRFIHGFNNFWFQRLRFARPAFGNILFLEKRR"
     gene            complement(2427..2999)
                     /locus_tag="VIT19_01250"
     CDS             complement(2427..2999)
                     /locus_tag="VIT19_01250"
                     /inference="COORDINATES: protein motif:HMM:TIGR02595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HEY5837628.1"
                     /translation="MITRLGQVVLLVFFFAAPAFAEPVVITFSSGPPISSELFPSYTE
                     GGFTFCCNFRIFQNADTGNFAISNNSFHISTPNSIFITFNGGGQFDFLGVDRLFGVGR
                     DVFIGSNGVAIDFDDDAGVDFGAVFRGITSLEWRHFGVGGEPGPAPVEMDNFRFNTSP
                     NTPVPEPATLILLGAGLLGVLKATRKRESN"
     gene            3104..3823
                     /locus_tag="VIT19_01255"
     CDS             3104..3823
                     /locus_tag="VIT19_01255"
                     /inference="COORDINATES: protein motif:HMM:TIGR02595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HEY5837629.1"
                     /translation="MKVVVLARSAWKLSPITTFYDQSIFHRTVDLTAVRTGQAKHGGG
                     LMLRSESTRRSRVFLLLPTAMLFGALFAAPAHAETITLTGGQVILDIGGARSVMTTNL
                     TGPNFQLSAQGDFAFGQTLNEFRICSTSGCGGLDTLAMATFNGLTTRLVRGGGSFDES
                     TITGSFTLHNSQIPGLDEPPYPFAIDFVGVGTLETTPTRVTFTVNSPVPEPGTMLLLG
                     TGLTAVAAAVRRRRGKRSPAN"
     gene            complement(3820..>4470)
                     /locus_tag="VIT19_01260"
     CDS             complement(3820..>4470)
                     /locus_tag="VIT19_01260"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEY5837630.1"
                     /translation="RAPPGTDMKLRRRLLKRVLITTLCLALVWPFVAWAAAKFLHVQQ
                     PVAAADAIVVLSGPGTYLERNDWAGRLYHERRAPLVVVSNEGLLSGWSASDDRNLYFY
                     ELAIRRLEQQGVPAKDLRVVSDIGAGTYQESVRLCDYAAAEKLNRILIVTSAYHSRRA
                     LWSIQRACKDKPFQIGMESPPPGWQTPAPASWWLHKSGWRMVAGEYVKMIYYRVAY"
BASE COUNT          973 a         1250 c         1267 g          980 t
ORIGIN      
        1 tctgcttgcc gtcggccgcc tttcgcgcga gaaaggtcac gccgatctga tcgaatcaat
       61 tgctttgcta cgcgcgactg aaccggactt gaaaactaaa ctgctgatcg tcggtgaggg
      121 acctgagcaa gcgaatctcg cgcgcgcagt ctctgaacaa aacatcgcgt cacaggttgt
      181 ctttgttggg catgtcactg atgttgcccc gttctacgcg attgcagatg tactggcgtt
      241 accttcgcac agcgaaggct cgcccaacgt tctgttggaa gcaatggccg ccggcttacc
      301 agttgtcgca aacagcgtgg gtggcgtgcc tgagattgcg acttcggaag tgaacgcgtt
      361 gctcattccg gctcgcgatc cttcggcgtt tgctgaagcc ttgcgacgca tgctcactga
      421 ggtcgaactc gcgcccacgc tgaagaacaa tgcaatcgct cgcgcacgcg agttctctcc
      481 tgaatcacac gctcagtcgc tgattgagat ttatgaggag ctgatttccg cgactggagc
      541 gcaagcgtcc cgcttgcacg gtcggtcact tcaaccgcgc aagcgaggac gcttgcgctc
      601 cagtcaaacc gacgcttaac catgcgcgtc tccgtcatca ttccgctttt caacaaagcg
      661 ccgttcattg agcgggcgtt gcgctccgtc gcggcccaaa cgtttgccga ctttgaaatt
      721 atcgttgtcg atgacgggtc aacggacgac ggattgacga gcgttgagaa gtttaccgat
      781 tcgcgtttgc gcatcgtcag gcaggaaaat gccgggccgg gagcagctcg aaatcgtggt
      841 ctgcgcgaag cccgcggcga ttttgtcgct tttctggatg ctgacgatga atggctgcca
      901 gagtatctcg ccgaaagtct gcactcgctt gatgagccag ggtcaaaagc cgcagccgtc
      961 gtttccggat acttcgaaca tcctgccggc gtttcacgcg atgagatgtg gcgccggcgt
     1021 ggcttgcgcg atggcgagat gcgtttgagt ggggaaacgg aaccaagtct cgcaattgcc
     1081 ttgctcgctt acatgacgcc gtgcacgacc gtggcgcgca ccgaagtcct gcgcaagcac
     1141 ggcggttttt acgagcgcga cctctgcgcg tatggcgagg acgcacactt gtggctaaag
     1201 ctgctgctga acgaatcggt gagcgttaat ctgaagccat tggcgcgcat tcactttgaa
     1261 gcgtcaggcg cgacccaaac gcgccgcagt gtgcgaccgg tcgagccctt cttgcgtgat
     1321 ccggacgaaa tcaaatcaag ttgtccaccg cacctgcgcg aactgctctc gcgtgttctc
     1381 gcgactcgcg ctttgaaaac cgcctgcatg ctcggttact ggggacgctg gcgcgaagct
     1441 cgcgaaatcg tcaaacgctt ccgcgcgccg ggacgttggc gcctgcctta ttacgcacct
     1501 tctttgattt gtcgaacgcc gtttggctcc gcgcttggca aagtaagtcg aatggttttg
     1561 tccgcggaat gaattcgagg gaacaagaac gatgactaat tctgaatcag tgcttgttga
     1621 gaatttgctg tcgcggccag agatgcaccg gcaatgggcc cgcgactatc gaaccgatga
     1681 caacgagaga ttttacgagc aggcctttga tttcatcgcc ggtaggctga agcctgaacc
     1741 ggggacaact ttcctcgacg caggctgcgg cagttgtgcg cactcagtcc gtctggcgcg
     1801 gcgcgggttc aaggtccacg cggtcgattt ttccgaaagc gcactcagaa tggccctgca
     1861 attcgtgcgc gagaaaggtg tccaggaccg cattacgctc ggccgcgaaa gtctgctcga
     1921 actttcattc ccggaccaga gtttcgacta cgttttgtgt tggggtgtgc tgatgcacat
     1981 cccggacgtc aagcgtgccg tcgccgagtt ggcccgcgtg ctgaagccag gtggcgcgct
     2041 cgtgatcagc gaaggcaaca agtcttcgct tgaagccgtc gcgatgcgaa atctgaagag
     2101 agttctacgc cgggaaaaag cgcaagtgaa agatacgccg gcgggcgtcg aatactggaa
     2161 agagaaagac ggcgacgcac tggttacccg tcaggcaaac atccgctggc tgatacaaga
     2221 gctcgatcag catggcctgt cgctgacgac gcgcgcgcct ggacagttta cggaaagcta
     2281 tcggatgacc tcagcacctc ggctgaagag attcattcac ggcttcaaca acttctggtt
     2341 tcaacgcttg agatttgcgc ggcccgcttt cggtaacatt ctctttcttg aaaagcgcag
     2401 gtaggccaag cctcgcgtcg tcagcgctag ttactttccc tttttctcgt tgccttcagg
     2461 acgccgagca gccccgcgcc cagcagaatc agtgtggctg gctcgggaac gggtgtgtta
     2521 ggggaggtat taaacctgaa gttatccatt tcaaccggcg ccggtccggg ttccccacct
     2581 acgccaaaat gccgccattc gagcgacgtg atgccgcgaa atacggcgcc gaaatcgaca
     2641 ccggcgtcat catcgaagtc gatcgcgact ccatttgagc cgatgaaaac gtccctgcca
     2701 acgccgaaca ggcgatctac acccagaaaa tcgaactgac ctccgccgtt gaaagtgatg
     2761 aaaatgctgt ttggagtaga gatatgaaat gaattgttgc taatggcgaa gttaccggta
     2821 tctgcgttct gaaatattcg aaaattgcag cagaaagtga agccgccttc cgtgtaactt
     2881 gggaataact cgctactgat tggtggaccc gaactgaaag taatgacaac tggctcggcg
     2941 aaagcgggcg cggcgaaaaa gaaaaccaat agtacaacct ggccaagtct ggttatcata
     3001 gttgggccct gcactggctg cacacacaga tgccttgatc ttagccctgt gcgaatatct
     3061 agtcctttag gtctggaaac gacgaattgg attcgggttc cgcatgaagg ttgtcgtcct
     3121 ggcccgttcc gcctggaaac tcagtcccat caccactttc tacgatcaaa gtatttttca
     3181 tcgaaccgtc gatctgactg ctgtgcggac aggtcaagca aaacacgggg gtgggttgat
     3241 gctacgttca gaatccacac gaagaagcag agtgtttcta cttcttccaa cggcaatgct
     3301 atttggtgct ctgttcgccg ctccagcgca cgccgaaaca attactctca cgggcggcca
     3361 agtcatattg gatatcggcg gagccaggtc ggtaatgacc acgaacctga ccgggccgaa
     3421 tttccagctc agtgcacagg gtgacttcgc ttttggtcaa acccttaacg aatttagaat
     3481 ctgtagcacg tccggttgcg gcggtcttga cacgcttgca atggccacct tcaatggtct
     3541 taccacccga ttagttagag gaggcggcag tttcgacgaa tcgacaatca ctggttcgtt
     3601 tacgctacac aacagccaaa tccccggtct tgacgagcca ccttatccgt ttgcaatcga
     3661 tttcgtcggc gtaggcactc ttgagacgac gccaacgaga gtgaccttca cagtgaactc
     3721 gccggttccg gagcccggaa caatgctgtt actcggcacc ggtctaaccg ctgtcgctgc
     3781 ggctgtcaga cgccgacgtg gtaagagatc accagcgaac taataagcga cccggtaata
     3841 aatcatcttc acgtattcgc ccgctaccat tcgccatccg gatttgtgca gccaccagga
     3901 cgcgggtgcg ggtgtctgcc agcccggcgg cggactttcc attccgattt gaaatggctt
     3961 gtctttacag gctcgctgaa tcgaccagag tgcccggcgc gagtgatagg ctgaggtcac
     4021 gatcaatatt cggttgagtt tctcagcggc ggcatagtca cacagacgca cgctctcctg
     4081 ataagttccg gcgccgatgt cggaaacgac gcggaggtct ttcgctggaa caccctgttg
     4141 ctccaaacgc cgaatggcca actcgtaaaa atacaaattg cggtcatcgc tcgctgacca
     4201 tccgcttaac aatccttcgt tgcttacgac aaccagcggc gcacgccgtt cgtggtaaag
     4261 ccggcccgcc cagtcgttgc gttcaaggta ggtgccgggg ccactgagga cgacaatcgc
     4321 gtcggccgcc gcgacgggtt gttgcacgtg cagaaatttg gcggccgccc aggcgacaaa
     4381 cggccagacg agtgcgagac agagcgtcgt gatcagcacg cgcttcaata ggcggcgacg
     4441 aagtttcatg tcagtaccgg gaggggcgcg
//
LOCUS       DATDBY010000062         2299 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2793623, whole genome shotgun sequence.
ACCESSION   DATDBY010000062 DATDBY010000000
VERSION     DATDBY010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2299
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2793623"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..471
                     /locus_tag="VIT19_01265"
     CDS             <1..471
                     /locus_tag="VIT19_01265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837631.1"
                     /translation="FDYPDGWSITDDSSSDAQQLTLGRSDSEALIKFFVHRGKVNTPD
                     KVALAKTKIIEPYLSYTEKQFVQMGAKPERAAATTKIAGADAEGVRITAVLDGEPGEA
                     GVYWATVGERLVVLTLFGPNKAIKKAEPTWDAVRNSLKIEASAPKATPSPTAKP"
     gene            complement(491..1708)
                     /locus_tag="VIT19_01270"
     CDS             complement(491..1708)
                     /locus_tag="VIT19_01270"
                     /inference="COORDINATES: protein motif:HMM:NF005744.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEY5837632.1"
                     /translation="MSGVTVSKVALSRRAIETPASPIRRLVPYADRAKARGIKVYHLN
                     IGQPDIETPAEMMDGYRDVDIKVLSYGPSQGLKEYIDALVLYYGRVGIEVRAQDILVT
                     TGGSEAIMFALDTVADAGDEVIVPEPFYTNYSGFASTASVKLVPVTCLAETGFALPPK
                     AEFERAITSRTRAIIYSNPGNPTGAVFTRPELEMLAELCVEHGLYLIGDEAYREFIYD
                     DDDGHTSVLNLAGIEDRAILVDSVSKRYSACGARIGCIISRNAELMAAVLKFGQARLC
                     PPTVDQMAALAAVKVPDSYFAEVRREYQSRRDLVCEAIAKIPGAVCRKPGGAFYVVPK
                     LPIRDGEEFAIFMLEEFQLDNETVMVAPAEGFYGTPGMGKDEVRIAYVLNCDDLARAM
                     KILAAGVEAYNRK"
     gene            complement(1854..>2299)
                     /locus_tag="VIT19_01275"
     CDS             complement(1854..>2299)
                     /locus_tag="VIT19_01275"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5837633.1"
                     /translation="IAAPIMSEDESSPLREAATSGANSQPCVLLVEDDRSVRRYLEVT
                     LQRSGYRVLTAEDGLQAMKVAMSSAIDVVVTDAIMPNLSGQQLAAFLRKNPKLSSIPI
                     VLLTGQENKAASAAGDVMIDAFLYKPVKADELKNCVGKLVKSPRG"
BASE COUNT          478 a          715 c          644 g          462 t
ORIGIN      
        1 ttcgactatc cggatggttg gtcgattact gacgacagca gctccgatgc gcagcaactg
       61 accttgggcc gttccgacag cgaagccttg atcaagttct tcgtgcaccg cggcaaggta
      121 aacacgccgg acaaggtggc cctggcgaag accaagatca tcgaaccgta tctgagttac
      181 accgaaaaac aattcgtgca gatgggtgcg aagccggaac gcgctgcggc aacgacaaag
      241 atcgcgggcg ctgacgcgga aggcgtgcgc attaccgcag ttctcgatgg tgaaccgggc
      301 gaagcgggtg tctattgggc gactgtgggc gagcgtttgg tggtgctcac gctgtttggg
      361 ccgaacaaag cgatcaagaa agcagagccg acgtgggacg cagtgcgcaa cagtttgaag
      421 atcgaagcgt ccgcacctaa agcgacgccg tcaccaacgg caaaaccgta agattagcta
      481 acgcggtcat ctacttccgg ttgtacgctt ccacgccagc ggcgaggatc ttcattgccc
      541 gcgccaggtc atcgcagttg agcacatagg cgatgcgaac ctcatccttg cccatgcccg
      601 gggttccgta gaatccttcg gccggcgcga ccatcaccgt ctcattgtcg agttggaact
      661 cttcaagcat gaagatggcg aattcctcgc cgtcacgaat cggcaacttg ggcacaacgt
      721 agaatgcgcc ccccggcttg cggcagaccg cgcccggtat cttcgcgatc gcctcgcata
      781 ccaggtctct ccggctctga tactcgcggc gcacctcggc gaagtagctg tccggcacct
      841 tcaccgcggc cagcgccgcc atttggtcca ccgtcggcgg gcaaagccgg gcctgaccga
      901 acttcaatac cgcggccatc aattccgcgt tccggctgat gatgcacccg atccgtgcgc
      961 cacatgcgct gtaacgctta gacacgctgt ccaccagtat cgcgcgatct tcgatcccgg
     1021 ccagattgag cacgctcgtg tgcccgtcgt cgtcgtcgta gatgaactcg cggtacgcct
     1081 cgtcgccgat gaggtagagt ccgtgctcga cgcataattc cgcaagcatc tccagttcgg
     1141 gtcgcgtgaa aaccgcaccc gtcgggttcc ccggattgga atagatgatg gctcgggttc
     1201 tgctggtgat ggcccgttcg aactccgctt tgggtggcag ggcaaagccc gtctcggcga
     1261 gacacgtcac cggaacaagc ttgacgctgg cggttgacgc gaatccggaa tagttggtgt
     1321 agaaaggttc cggcacgatg acttcgtcgc cggcatcggc caccgtgtcc agcgcgaaca
     1381 ttattgcctc gctgccgccg gtcgtcacca gaatgtcctg ggcccgcacc tctattccta
     1441 ctcgaccata gtaaagaacc agcgcgtcaa tatattcctt caagccctgc gacggcccgt
     1501 aagacagcac tttgatatcg acgtcccgat atccgtccat catctcggct ggggtctcga
     1561 tatccggctg gccgatgttc aggtgataga ccttgatgcc gcgggcctta gcccggtcgg
     1621 cgtacggaac cagtcgtcga atcggagaag ccggcgtctc aatagcccgg cgggaaagtg
     1681 cgactttgct cactgtgact ccactcacga tagctctacc tcgctcctcc gccgcgtgct
     1741 gctcggcaac acggcccacc gaatatacca gagcttcacg gtacgaacgc ctccggcgtg
     1801 ctagtccatc gaacagcgaa agcacgccag aggcatgcgt accgatagtc gcgtcacccc
     1861 cgcggactct tcacaagttt gccgacgcag ttcttcaatt catcagcctt caccggcttg
     1921 tagaggaacg catcgatcat cacatcacca gcagccgaag ctgctttatt ctcctgaccc
     1981 gtcaacagca cgatcggaat actcgagagc ttgggatttt tccggagaaa cgcggcgagc
     2041 tgttggccgc tcaagttcgg catgattgcg tccgtgacca caacgtcgat agccgaagac
     2101 atggccacct tcattgcttg caaaccgtcc tcagctgtca gtacacgata accagaacgc
     2161 tgaagagtga cctccagata tcgtctgacc gatcgatcgt cttctaccag cagcacgcaa
     2221 ggttgcgagt tggcgccgct ggtcgccgcc tcgcgcagag gcgatgattc gtcttcactc
     2281 atgattggcg ccgcgattt
//
LOCUS       DATDBY010000063         2031 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1571935, whole genome shotgun sequence.
ACCESSION   DATDBY010000063 DATDBY010000000
VERSION     DATDBY010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1571935"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VIT19_01280"
     CDS             <1..310
                     /locus_tag="VIT19_01280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837634.1"
                     /translation="ALDQALSVASLINGPVLGVFLVGVFLKRVSEPPALIGMVASMAA
                     MIYIRFATNIAWTWYVFIGSLITLIAAWLASFAFSAAPASRSQQLAVSPTEAVEEISE
                     "
     gene            323..>2031
                     /locus_tag="VIT19_01285"
     CDS             323..>2031
                     /locus_tag="VIT19_01285"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEY5837635.1"
                     /translation="MINSKRLPKKPARLATFLVVAFLLMPLPRIFAESVSVAREAAAV
                     RTPPECCTLEASLPTADKNPVKPYSRRPSKDALKWADKQLKQMSLEQKVGQLISVGVN
                     ATFLNQDSAAFNALRHQIVDNHVGGIILFRGPVYESVVLVNRMQELAKHPLLISADLE
                     AGAGMRFDDTINFPWAMATAATGNPEYARRAGDVTAREARALGVYHVYAPVADVNNNA
                     ANPVINVRSYGEDPAAVGRFVAAFVEGVQNAGVIATAKHFPGHGDTAVDSHRGLPEID
                     VTRERLNSVELVPFRAAVNAGVGSVMDGHIALPRIDPTVITPLPRDRKVGPIDTDEAG
                     EIVIERGTMPTTLSPKINAILRDDLQFDGLIVTDAMSMSGLTLYFTQEEASVRALEAG
                     ADQLLKPADTDAAFRGVIAAVKNGRLTEQRIEQSARKILAAKYDLGLVKQRITPIDEI
                     DRIVSGRQAGLLAEEIARHAVTLVRNDAGLLPLKLTPASKVFNLAITNGDDRLWITQT
                     FNGTMSRGGIKLETIVLDDRSSEAEVKKALDAAGRADVVLVSMYGRVRSGQARSVALP
                     EPGA"
BASE COUNT          424 a          586 c          612 g          409 t
ORIGIN      
        1 ggcacttgat caagcgctgt ccgtggcgtc gctaattaac ggtccggtgt tgggtgtgtt
       61 tctcgtgggc gtgtttctga aacgagtcag cgaaccaccc gcgctcatcg gcatggtggc
      121 gagcatggcc gccatgatct atatacgctt tgccaccaac atcgcgtgga cgtggtatgt
      181 ctttatcggt agcctcatta cgctcattgc cgcctggctg gcaagtttcg cattttcagc
      241 agcacccgcg agtcgcagcc agcagctggc ggtttcgccc acagaggcgg tggaagaaat
      301 ttctgaatag gattcgctct tcatgatcaa ttcgaaacga ttacccaaga agccggcaag
      361 actcgcgact ttcctcgttg tcgctttcct tctcatgcca ctgccacgaa ttttcgcgga
      421 gtctgtgtcg gttgcgcgcg aagctgcggc ggtacgcact cctccggagt gctgcacgct
      481 ggaggcaagt ctgcccactg cggacaagaa cccggttaag ccttactcgc gacggccgtc
      541 gaaagacgcg ttgaaatggg ccgacaaaca actcaaacag atgtcgctcg agcagaaggt
      601 cgggcagctg atttcagtcg gcgttaacgc cacttttctg aatcaggaca gcgcggcatt
      661 caatgcgctg cgtcatcaga ttgtcgataa ccacgtcggc ggaatcatcc tgtttcgcgg
      721 accggtctac gaatcggtgg tcctggtgaa tcggatgcag gaacttgcga agcacccgct
      781 cttaatatcc gccgatctcg aagccggcgc gggcatgcgc ttcgacgaca caataaattt
      841 cccctgggcg atggcaaccg cggccacggg aaatcctgaa tacgcgcggc gcgcgggcga
      901 tgtgaccgcg cgagaagcac gcgcgctcgg tgtgtaccac gtctacgccc cggtggcaga
      961 cgttaacaac aacgccgcga acccggtaat taacgttcgg tcgtacggcg aagacccggc
     1021 ggcggtcggc cgatttgtcg ccgccttcgt tgaaggcgtg cagaacgccg gcgtgatcgc
     1081 tacggccaaa cactttcccg gacacggtga cacggccgtg gattcgcatc gtggcctgcc
     1141 ggaaattgac gtgacacgcg agcgtctgaa cagcgtcgaa ctcgtcccgt tccgcgccgc
     1201 agtaaacgca ggcgtgggct cggtgatgga cgggcacatc gctttgccgc gaatcgatcc
     1261 gacagtaatc acacctttgc cgcgtgaccg gaaagtcggg cccatcgata cggacgaagc
     1321 cggcgaaatc gtgattgaaa gaggcacgat gccgacaact ctttcgccga agatcaatgc
     1381 gatactccgc gacgatcttc aattcgatgg tttgattgtg accgacgcga tgagcatgag
     1441 cgggctcacg ctctacttca cccaggaaga ggcatccgtg cgcgctctcg aagccggcgc
     1501 cgatcagctt ctgaagcccg ccgataccga cgctgctttt cgcggtgtaa tcgcggcggt
     1561 gaagaacggc cgcttaactg aacaacgtat cgaacaatcc gcgcgcaaga ttctcgccgc
     1621 caagtacgac ctcggtttgg tgaagcagcg aattacgccg atcgacgaaa tagatcggat
     1681 cgtttccgga agacaggcag gcctgctcgc tgaggaaatc gcgagacatg cggtaaccct
     1741 ggtgcgtaat gatgcggggc tgctgccgtt gaaactgacg ccggcttcga aagtcttcaa
     1801 tctcgcgatt acaaacggcg acgatcgtct gtggatcact cagacgttca acgggacgat
     1861 gagtcgtggc gggatcaagc ttgagacgat cgtcctcgac gatcgttcgt cagaggctga
     1921 agtgaagaag gccctcgacg cggcgggacg tgccgacgtt gtgcttgttt cgatgtatgg
     1981 ccgcgtgcgt tcaggccagg cgcgcagcgt ggcgctgcca gagcccggcg c
//
LOCUS       DATDBY010000064         3674 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1350575, whole genome shotgun sequence.
ACCESSION   DATDBY010000064 DATDBY010000000
VERSION     DATDBY010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3674
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1350575"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..602)
                     /locus_tag="VIT19_01290"
     CDS             complement(<1..602)
                     /locus_tag="VIT19_01290"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5837636.1"
                     /translation="MATTLRVLQVEDEERDATLLARHLSRHGYEVTSERVETQPEMRA
                     ALAAREWDIILCDYSMPEFNALAALSLMREMELDIPFIIISGTIGEGAAVEAMRAGAH
                     DYLMKDSLARLAPAIEREIAEAQNRSARREAEEQLRLQSAAVRAAANAIIITDRAGEI
                     LWINPAFTQTTGYSFAEVAGKNPRVLKSGKQDQGFYRDMW"
     gene            complement(611..2581)
                     /locus_tag="VIT19_01295"
     CDS             complement(611..2581)
                     /locus_tag="VIT19_01295"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY5837637.1"
                     /translation="MKNTTDTLKAAEDGLRRVEQVARESEERLHTVLESLSEGLVISD
                     LEGQVIHWNRAGLVMHGFSSMDECLVRLPDFQNIFELCSLDGNVLHLEQWPLARVIAG
                     EALVDYEVSVRRLDREWNRIFCYSGAIVQEPNGRALAFVAITDITEPKQAEQELRRSQ
                     KQLSGIINSAMDAVITVDDEQRIILFNAAAERMFLFPAADAVGQPLERFIPERFRATH
                     KHHVRDFGQTNVTRRSMGSLGALFGLRADGEEFPIEASISQIESDGQKLYTVILRDIS
                     ERKRAEEALKEQARILDLVPVVIHDLTDRIIFWNTGSEQMYGWKAEEALDKVTHNLLK
                     TEFPRPLEEIKARVLSRGHWEGELVHTTQDDRRLVIAGQWVLHRDEHGKPKAILQVNN
                     DVTERKQAEREIRRLNEELEQRVADRTAQLEAVNKELEAFSYSVSHDLRAPLRHINGF
                     SQALIEDYGDKLDAGAKSYLKQMREASQEMAQLIDDVLQLARVTRTEMKREKVDLTKV
                     ARRVIADLEKTNGQRKVDVKIEEGLSTRGDKRLLKVALVNLLGNAWKFTSRRNAAEVY
                     FGKLEENGEQVYVVRDNGAGFDMAYANKLFGAFQRLHTAGDFEGTGIGLATVQRIIGR
                     HGGRVWAEGEVNKGATFYFTLPNSQEQRDETP"
BASE COUNT          738 a         1096 c          967 g          873 t
ORIGIN      
        1 tcccacatgt cccggtaaaa accctgatcc tgttttccgg atttcaatac gcgggggttc
       61 ttacccgcga cctccgcaaa agagtagccg gtagtttgag tgaaggcggg attgatccag
      121 aggatttctc cggcgcggtc cgtgatgatg atggcgttgg ccgccgctcg taccgctgcg
      181 ctttgcaaac gcaattgttc ttcggcctct ctccgcgcgc tgcggttttg cgcttcggca
      241 atttcgcgct caatcgcggg cgctaaacga gccaggctgt ctttcatcag gtagtcgtgc
      301 gccccggcgc gcatggcttc gaccgcggct ccttcgccaa tcgtgcccga gataatgatg
      361 aagggaatgt cgagctccat ctccctcatc agcgagagcg cggccagagc gttgaattca
      421 ggcatcgaat agtcacagag gatgatgtcc cactcgcgcg cggccagagc ggcccgcatt
      481 tccggctggg tttccacccg ctcagaagtc acttcatacc catggcgaga caaatggcgc
      541 gccagcagag tggcgtcgcg ctcctcatct tcgacctgta atacccgcag agtagtggcc
      601 atattcttac tcagggtgtt tcatctcttt gctcctgaga atttgggagt gtgaaataga
      661 aggttgcgcc tttgttgact tcaccttcgg cccaaacgcg cccgccatgc cggcctatga
      721 ttcgttgcac cgtcgcaagt cctatccctg tcccctcaaa atccccggcc gtgtgcagtc
      781 gctgaaaagc gccgaataac ttgtttgcat aggccatatc gaatccggcc ccgttgtcgc
      841 gcacgacgta aacctgctcc ccgttctctt ccaacttccc aaaatagacc tctgcggcat
      901 ttcgcctgga agtgaatttc caggcatttc ccaaaagatt caccagggcc actttcagca
      961 ggcgcttgtc gccgcgcgtg gaaagccctt cctcgatctt gacgtcaacc tttcgttggc
     1021 cgtttgtttt ttccaggtcc gcgatcactc tccgcgctac tttggttaga tcgaccttct
     1081 cacgcttcat ctcggtgcgc gtgacgcggg cgagctgcaa cacatcgtca atcagttgcg
     1141 ccatctcctg gctcgcttcg cgcatttgct tgagataact ctttgcgccc gcgtccagtt
     1201 tgtccccata gtcttcaatc aatgcctggc tgaagccgtt gatgtgtctc agcggggcgc
     1261 gcaaatcgtg agagacggaa taagaaaaag cttccaactc tttattgacg gcctcgagtt
     1321 gtgcagtccg atcggcgacc cgctgttcga gctcttcatt gagccgccga atctcgcgtt
     1381 cggcctgttt gcgctcagtc acgtcgttgt ttacctgtag gatcgccttg ggcttcccat
     1441 gctcgtcacg gtgtaagacc cattggccgg caatcaccag ccgccgatca tcctgggtcg
     1501 tgtgtacaag ttcgccttcc cagtgcccac gcgataacac ccgcgcctta atttcttcca
     1561 acggccgggg aaactcagtt ttaaggagat tgtgcgttac cttgtcgaga gcttcttcag
     1621 ctttccagcc gtacatttgc tccgagccgg tgttccagaa aatgattcgg tcggtaagat
     1681 cgtgaatcac cacgggcacc agatccagga ttcgcgcctg ttcttttaaa gcctcctccg
     1741 cgcgcttgcg ctcgctgatg tcgcgaagga ttaccgtgta aagcttctgc ccgtccgact
     1801 cgatttgcga gattgaagcc tctattggaa attcctcgcc gtcggcgcga agtccaaaaa
     1861 gggcgcccag cgatcccatc gagcgcctgg tcacattagt ctggccaaaa tcccgtacgt
     1921 gatgtttgtg ggtggcgcgg aaacgttcgg gaatgaaccg ttcgagcggc tgacccacgg
     1981 cgtcggcggc gggaaagaga aacatccgtt cggccgcggc attaaagaga atgatgcgct
     2041 gctcgtcgtc gacggtgatc actgcatcca tcgctgagtt gatgattcca gagagttgct
     2101 tctgactgcg ccgcaactcc tgttcggcct gcttgggctc ggttatatct gtaatcgcga
     2161 caaatgcgag tgctcgcccg ttgggttcct ggacgatagc cccgctgtaa cagaagattc
     2221 ggttccactc gcggtcgagc cggcgtacgc taacctcgta atcaaccaac gcttcgcccg
     2281 cgatcacgcg ggccaggggc cactgctcca gatggagcac gttgccgtcc aggctgcaaa
     2341 gctcaaagat gttctgaaag tccgggagtc taacgaggca ctcgtccatg ctggaaaagc
     2401 catgcatcac aagtccggcg cgattccagt gaatcacctg accttccagg tctgagatca
     2461 ccaaaccttc gctcaggctc tcgagcacgg tatgaagccg ttcttcgctt tcacgggcta
     2521 cctgctcaac gcgtcggagt ccatcctccg ccgctttcaa tgtgtccgtt gtgttcttca
     2581 ttaaagaggc ttaatcgcgc cgcggatcga ataccgaggc gaaatctaat tgaggacacg
     2641 gctggggaga tcctgaaagg agagggacgc cggctcgccc ccgatacgac gtccctctcg
     2701 acgcggtggc cccccacgcg ggccggccgc gatcctcaaa acggatccta acggttggtt
     2761 gactcagcgt gcgtgcgtca acttcgttgc gcgatgtttc cggacttgct cgttcggctt
     2821 tggagggctc tccaggtagg tgtcctcttc aggaccgaga gagaactgaa ctatccacac
     2881 tagttgctct cgacttgggg cgcctaacaa aactgttgaa gcacggttgg ccagaaacga
     2941 tcgagaagcg atttacgctt cgcgacttct gtaaaccagc ttcttgtcgg gatcaggaga
     3001 ctcttcaggg gtgagagact cttcagggtg agggcatgct agcaccgaac gaagatcgca
     3061 caagcaagga agatcctgat tttgagcaag gctattcctg agcagcgttt ttactgcggt
     3121 tcgttcgcgg ctttgcgtaa aaggctcgag taatcttcga cctaaggcta gctgcgcgga
     3181 tgagcgagtg attactccgg ctagcctatt ccgttgcgcg agaaccaggt agcaggtaac
     3241 agcaaatccg gcttaccgag cctcaaactt tcgtcgcgca tgcatcaacg cggacttgtt
     3301 gaatatgcgg acgacccatc aatttttatc cgcagccgcg agtgaacgaa cacggctgaa
     3361 ctaatgctat tgaacacttc gatgtaaacg ggtctttgtc gcggcacacg atctgcaatc
     3421 atccgccagg acggcccaaa accggccttt agccactgtc ttctgcccag attaccccgg
     3481 cacctctcac accctgttgc gtttcgcctc aactgttttt tcttgagatt ccacgctcac
     3541 cttcgctcac gaaggttttt ccaagcttca gaaaggtccc aaatgaattc tatccaccaa
     3601 aagatccgac ccgcatcctt gttactggtc gtggccgcac ttgccgccgc acaattgata
     3661 tccgccgcgc ccgc
//
LOCUS       DATDBY010000065         2180 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2792018, whole genome shotgun sequence.
ACCESSION   DATDBY010000065 DATDBY010000000
VERSION     DATDBY010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2180
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2792018"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..747
                     /locus_tag="VIT19_01300"
     CDS             <1..747
                     /locus_tag="VIT19_01300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837638.1"
                     /translation="QFYDALITPQGMLILKVLLVVSLLCAGLGLFTAITTKSAALLFL
                     FYEGLVRSFGLFNHDEMIGVYILVVLAFTPCGDDLSIDKRWGRAAPRLPGIAYGYPIL
                     LMRILVAWSYFSSAVIKMRVTGLRYFSPDNLPVVSIWHSLDNLHESQHKLAFWLPNIR
                     GITGAIVVVALLWELAFPLAIFSKRARRIILPFGIVFHLSTIFFMNISFPYHLAAYVV
                     FIDWPWVAARIARSKIFQALRPSQPRSVPA"
     gene            829..1098
                     /locus_tag="VIT19_01305"
     CDS             829..1098
                     /locus_tag="VIT19_01305"
                     /inference="COORDINATES: protein motif:HMM:NF017239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqqD family protein"
                     /protein_id="HEY5837639.1"
                     /translation="MTQLAPQDHVVFTEFDGTEGILVDLNTKKYYQLNETATLIWKGL
                     GLGLGINDIADQIVAAYEITPSDARRNVDATLEKLISYNLVARHQ"
     gene            complement(1142..>2180)
                     /locus_tag="VIT19_01310"
     CDS             complement(1142..>2180)
                     /locus_tag="VIT19_01310"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY5837640.1"
                     /translation="PHLLEAVGRTIDELDMYSPSGKHLHLKLEEPFAVYSRIAFDTFL
                     RERAREAGAHVFADKVSGRGFKRSDDAWTIKTTSGAEFSGKYLIGADGANSAIAKKLA
                     GPLPPAEMEVAFGYRAPLPESSDAATVVAFLPQWVGYAWAFPRIDHVSFGIATTQDAF
                     DHEALDRLLWDFMVSYYEVAQAGNSRAMRLWSRKSDEAKVKNLRRKAERYAARIPGLA
                     PRTWDTRKACGDGWALLGDAAGFADPVTGEGIYYALKSAELFANAYLKGKPEEYESLW
                     RADFGGDLKRASQMRRRFYGNFWGAPFTDRMIEFARGHRGIRKVLGELVAGDQGYVGL
                     KKKLARSALKP"
BASE COUNT          439 a          643 c          581 g          517 t
ORIGIN      
        1 caattttacg atgccctaat aacgccgcaa ggcatgctta tcctgaaagt cctgctggtc
       61 gtttcgttgt tgtgcgccgg tctcggtctc ttcaccgcta tcaccaccaa gtctgcggca
      121 ctgctctttc tgttttacga gggactggtg cgaagcttcg gtcttttcaa tcacgacgaa
      181 atgatcgggg tctatattct tgtcgtgctc gcattcacgc cgtgcggcga cgatttatca
      241 atcgacaaac ggtgggggag agctgcgccg cgcctgcccg gtatcgcata tggctatccc
      301 attctcctga tgcggatttt ggtcgcgtgg tcttacttca gttcggctgt gataaaaatg
      361 cgagtgaccg gcttgcgata tttcagccct gacaatttgc ccgtcgtttc gatctggcat
      421 tcgctggaca atttgcacga gtcgcaacac aagctggcgt tctggctacc gaacatccgg
      481 ggaataaccg gggcgattgt ggttgtggcg ttgctgtggg aactcgcttt cccgctggca
      541 attttttcca aacgggcgcg gcggataatt ttgccgttcg ggatcgtttt tcatttgtcc
      601 acgatcttct tcatgaacat ctcgttccct tatcacctgg ccgcctatgt cgttttcatc
      661 gactggcctt gggtggcggc gcgcatcgcc cgaagcaaaa tctttcaggc gctaaggcct
      721 tctcaaccgc gctcggttcc ggcttgaaga ccaactggtt gtaaaacggg tgccggtgtt
      781 attctgtggc ggcccaagct tcaaggattt cgggaatcac gcactctaat gacacaactc
      841 gcgccgcaag atcacgttgt ctttacggaa ttcgacggca ctgaaggaat tctcgtcgat
      901 ctcaacacca agaagtatta ccagctcaac gaaacggcga ccctgatttg gaagggtttg
      961 ggcctggggc ttggtatcaa tgacatcgcg gaccaaatcg ttgcggcgta cgaaatcaca
     1021 ccgtccgacg cgcgtcggaa tgtagacgcg acgctggaga aactaatctc ctacaacctg
     1081 gtcgcgcgac atcagtagtt gcattagcgc gcttgttttc tggagtctct gactgacttc
     1141 actatggctt taatgcactg cgcgccaact tctttttcaa gcccacatag ccttgatcac
     1201 cggcaacaag ttcgccaagg actttgcgta tgccgcgatg tccgcgcgcg aactcaatca
     1261 tccggtccgt aaacggcgcg ccccagaagt ttccgtagaa ccggcggcgc atctgtgaag
     1321 cgcgtttcaa atcgccaccg aaatctgcgc gccaaaggct ctcgtattct tccggcttcc
     1381 ctttcaggta cgcattcgca aacagttccg cggacttcag cgcgtagtaa atcccttcgc
     1441 cggttaccgg atcggcaaat ccggccgcgt caccaagcaa agcccaaccg tcgccgcagg
     1501 ctttccgagt gtcccaggtg cgcggcgcga gaccgggaat acgcgcggcg taacgttcgg
     1561 cttttcgcct caagttttta actttcgctt cgtcgctctt gcgtgaccag agacgcatcg
     1621 cacgcgagtt accagcttgc gctacttcgt agtagctcac catgaaatcc cacaacaagc
     1681 gatcgagtgc ttcgtgatcg aatgcgtcct gcgtcgtcgc aatcccgaaa ctcacatgat
     1741 cgattcgggg aaatgcccac gcgtagccga cccactgggg cagaaaagcc accaccgtcg
     1801 cggcgtcgga tgactcaggc aacggcgcgc gatagccgaa ggcgacttcc atctcggcgg
     1861 gcggcaaagg cccggcgagc ttcttcgcaa tcgcgctgtt cgcgccatcg gcgccaatca
     1921 ggtacttgcc ggaaaactct gcgccgcttg tcgttttgat cgtccacgca tcatccgacc
     1981 gcttgaagcc gcgtcccgag actttgtctg cgaacacgtg agcgcccgct tcacgcgcac
     2041 gctcgcgcag aaaagtgtcg aatgcgatgc gcgagtaaac cgcgaacggc tcttccagtt
     2101 tcaggtgaag gtgcttgccc gaaggcgagt acatgtcgag ttcgtcgatc gttcgtccca
     2161 cggcctcaag caaatgcggc
//
LOCUS       DATDBY010000066         4209 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2589537, whole genome shotgun sequence.
ACCESSION   DATDBY010000066 DATDBY010000000
VERSION     DATDBY010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4209
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2589537"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..593)
                     /locus_tag="VIT19_01315"
     CDS             complement(<1..593)
                     /locus_tag="VIT19_01315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837641.1"
                     /translation="MKKLTLSLLLVIFSTATAFAQTGTAPAANGNSASNASAAIPAPP
                     AINANTTPVELARAALAAQGGDKFKNVKNIRIHGDVNLYSPNSSFPQPGKFSLVTAGA
                     KMRLDVDSPVIKFKQIFDGQQSYSSMPGVQTPPADKFGLFVLTKYDQPGYTVSALANQ
                     KKLRGFRIVDPDGNTTDFYIDPINARVIKYVSPYMGYT"
     gene            complement(719..3862)
                     /locus_tag="VIT19_01320"
     CDS             complement(719..3862)
                     /locus_tag="VIT19_01320"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5837642.1"
                     /translation="MMTRKLITYISAFLLTVAICATVSAQARATLRGSVNDEVGAVIV
                     GATVTLTDASGGAPKTATSGADGGFVFNGLIPGKYMISAEAGGFSGSEAVEVEVTTAR
                     RDPFVITLKVAEIESEVSVEANTPVSTDAASNANQQVISGKDLEALPDDPDELAAALQ
                     ALAGPSIGPGGGQIFIDGFSGANMPPKESIREIRINQNPFAAENDQPSGRIDILTKPG
                     TDKFRGGAYFNFTDESLNSRNPFAVSSNKRAPFQLRHFGGNVSGPLIANKMSFFFDIN
                     RDETDDNELVRATILDSNFNITQFGIGFLSPRRRTGVGTRIEYAINASNTLIGRYNFN
                     RTNTENNGVGNFSLPERGYDFVSTNQNVQLTETAVINATTINETRFQFSHNRSESLGN
                     NTIPTLNVSGAFSGCVGNAIGCSTIGQATNQRTGWELNNFTQMQRGMHNIKFGGRVRN
                     TRIEDISPNNFGGSWAFNGGAGPQLDAANNPVGGNIVLSSIERYRRTVAIGSQGALTA
                     QQQAFCGPGATFAQCIRMLGGGASQFSINTGNPNAEVSQTDLAVYAQDDWRIRPNFTL
                     SYGLRYEYQTNADSRFNFAPRLGFAWSPGGGANATRPPKMVIRGGVGVFYNRFSEGQT
                     LQANRFNGLNQLQFAVPEIIIRENGVQRPPTVAEQAATANFALLNIFPVVPGNALLAL
                     IPPTQQTVYRVDSNLQAPNLYLMGLQVERQLPKNITMFIGAYTMRMTHGIRLRDINAP
                     LPPTFTTRPIAGAGDIYQYESSGKFRMSQMFIGFNSRLNPRLSLSGNYSLAKASGDFD
                     GFGGTGLPMNSYDLSIENGRTSGDVRHRFTIFGTITSPWWGLTFNPFVIANTGAPFNI
                     TTGQDLNLDRAFNERPTFAQLNAYCTNPINTSRCSDFDFSNTSNEFIPRNYGQSPGSI
                     SVNLRVGKTFSFGGESAPRAAGGGGGQRGGGGRGAAPSVPSAGGHRGGGGPPGGGISM
                     GGPGGGAGRYSLNVSINVQNLFNKVNLGRPEGNLTSTNFGQSLGLAGSFGGFGGGGGG
                     SSGAGNRRIYLNLRLNF"
     gene            complement(3948..>4209)
                     /locus_tag="VIT19_01325"
     CDS             complement(3948..>4209)
                     /locus_tag="VIT19_01325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837643.1"
                     /translation="GGQNMADLIDRLPTIAITEIKVGDMIIMSTLAGTDQNRLTAVSM
                     VTGVEPLLTMLAQRQAAGGGQPRPQNVDLQGNFGGMFGGGGP"
BASE COUNT          902 a         1169 c         1227 g          911 t
ORIGIN      
        1 gtgtagccca tgtacgggct gacgtactta atcacacgcg cgttgatggg atcgatgtag
       61 aagtcggtgg tgttgccgtc gggatccacg atgcgaaagc cgcgcagctt cttttgattt
      121 gccaaagcag agacggtgta gcccggctga tcatatttcg tcaggacgaa cagtccgaac
      181 ttgtccgcgg gcggcgtctg tacgccaggc atcgagctgt acgattgctg gccgtcaaag
      241 atctgtttga atttgataac cggcgagtca acatcgaggc gcatttttgc gccggcggta
      301 accaacgaaa acttgccagg ctgagggaac gagctgttcg gtgagtaaag attaacatcg
      361 ccgtggatcc gaatattttt cacgttcttg aatttgtctc caccctgcgc ggccagcgca
      421 gcgcgcgcca gttcaaccgg agtggtgttg gcgttaattg ccggcggcgc cggaatcgcc
      481 gcactcgcat tagaagctga attgccgttg gcggccgggg ctgttccggt ttgcgcgaac
      541 gctgttgcgg tagaaaagat cacgagcagc aggcttaacg tgagtttttt cattgtgact
      601 ctccctgaag aatggcgaga tggctctcgt caggcacttg gcatcgggca aaaaaatccc
      661 gaagcctttg ataaaactta aagctccggg atttattacg cccacgccag gcgtaagttc
      721 agaaatttaa gcgcaggttg aggtaaatgc gccgattgcc tgcgccggaa ctgccaccgc
      781 cgccgccgcc gaagccgcca aaactgccgg cgagtccaag cgattggcca aagttcgtcg
      841 aagttagatt gccctcaggc cgtcccaaat tcactttatt gaacaggttc tgcacgttaa
      901 tcgaaacgtt cagcgagtat cgacctgcgc cgccacccgg gccgcccatc gatatgccgc
      961 cgccgggagg gccgccgccg ccgcggtggc caccggcgct gggaacggac ggggcggcgc
     1021 cgcgaccgcc gccaccacgt tggccgccac cgccacctgc cgcgcgtggg gcagactcac
     1081 cgccaaagct gaaggtcttg ccgacccgca ggttcaccga aattgagccg ggactttgtc
     1141 cgtaattgcg cgggataaat tcgttgctgg tgtttgaaaa atcaaagtcg ctgcaacgcg
     1201 aggtattgat cgggttcgtg cagtaggcgt tcaactgcgc gaaagtcggc cgttcattga
     1261 aagcacggtc gagattcaga tcctgaccgg tcgtgatatt gaacggcgcg ccggtgtttg
     1321 cgatgacgaa cggattaaag gtcagtcccc accatggcga agtgattgtg ccgaaaatcg
     1381 tgaagcgatg ccgcacatca cctgaggtgc gaccgttttc gatcgacaaa tcgtaggaat
     1441 tcatcggcag gccagtgcca ccgaatccat caaagtcacc gctggcttta gccaaactgt
     1501 agttgcccga aagtgaaagc cgtggattaa gccggctgtt gaagccgata aacatttggc
     1561 tcatccggaa cttgccgctc gactcgtact gatagatgtc gccggctccg gcgatgggcc
     1621 gagtcgtgaa agtcggcggc agcggcgcat taatgtcacg cagacggatg ccgtgagtca
     1681 tgcgcatcgt gtaagcaccg ataaacatgg tgatgttctt cggcaactga cgttcgactt
     1741 gcaagcccat caggtacagg ttcggcgctt gaagattcga atcgacgcgg taaacggtct
     1801 gctgagtcgg cggaatcagg gcgagcaggg cattgccagg tacaaccggg aatatgttga
     1861 gcagcgcgaa gttggcagta gcggcctgct cagccaccgt gggtggtcgc tgcacgccat
     1921 tctcgcgaat aattatttca ggcactgcga actgaagttg attgagccca ttgaagcgat
     1981 tcgcctggag cgtctgacct tcactaaagc ggttgtagaa gacgccgacg ccaccgcgaa
     2041 taaccatctt cggcgggcgc gttgcattag caccgccacc tggagaccaa gcgaatccaa
     2101 ggcgcggcgc aaaattaaat cggctgtcgg cgtttgtttg gtattcgtag cgcaggccgt
     2161 agctcagagt gaagtttgga cgtatgcgcc aatcatcctg cgcgtaaacg gccaaatccg
     2221 tctgcgaaac ctcagcattt ggattacctg tgttgatgct gaactgcgaa gcgccaccgc
     2281 cgagcatacg gatacactgg gcaaacgtag cgcctgggcc gcaaaaggct tgctgctgcg
     2341 ccgtgagggc tccttgcgaa ccaatcgcga cggtccggcg atagcgctcg atgctgctga
     2401 gtacgatgtt ccctccgacg ggattattcg ccgcatcgag ttgcggtcca gcgccaccgt
     2461 taaacgccca cgagccgccg aaattattcg ggctgatgtc ttcaatcctg gtgttgcgga
     2521 cgcggccacc gaatttgatg ttgtgcatgc cccgctgcat ctgcgtgaag ttgttcaact
     2581 cccagccggt gcgttggttg gtcgcctgac ctatcgtcga gcagccgatc gcattgccga
     2641 cacagccgct aaacgcgccg ctgacgttca aagtcggaat tgtgttattg ccaagcgact
     2701 cgctgcgatt gtgcgagaac tgaaatcgcg tctcgttaat cgtggtcgcg tttatgacgg
     2761 cggtttccgt taactgcacg ttctgattgg tcgaaacaaa atcgtagcca cgctcgggca
     2821 gcgagaagtt gccgacgccg ttgttctccg tgttagtgcg attgaagttg taacggccga
     2881 tcaaggtatt actcgcgttg attgcatact cgatgcgcgt gccgacgccg gtgcggcggc
     2941 gcggtgaaag aaagccgatg ccgaactgcg tgatattaaa gttcgagtcg agaatggtgg
     3001 cgcgcaccag ctcgttgtcg tcggtttcat cgcggttaat gtcgaaaaag aaagacatct
     3061 tattggcgat tagcgggccg ctcacattgc cgccaaaatg ccgaagctga aacggcgccc
     3121 gcttgttcga gctgacggcg aacggattcc gcgagttcaa actctcgtcg gtaaagttga
     3181 aatatgcgcc accgcgaaat ttgtcggtac ccggtttggt gagaatgtcg atacggcctg
     3241 acggctgatc gttttcggcc gcgaacggat tctgattgat gcgaatttcg cggatagatt
     3301 ctttcggcgg catgttcgcg ccggaaaagc cgtcgataaa aatctggccg ccccccggac
     3361 cgatcgaagg acccgccagc gcctgcaaag cggccgcgag ttcgtccgga tcatccggca
     3421 gggcttcgag atctttgccg ctaatcactt gttgattcgc attgctcgcg gcgtcggtgc
     3481 tgaccggcgt gttcgcctcg acactgactt cgctttcgat ctcggcgacc ttcaacgtga
     3541 tcacgaacgg atcgcgccgc gcagtcgtta cctcaacctc gaccgcctcg gagcctgaga
     3601 agccgccggc ttcggcgcta atcatgtatt tgcccggaat caggccatta aatacaaaac
     3661 cgccatcggc gcccgacgtg gccgttttcg gcgcgccgcc cgaggcgtca gtaagggtta
     3721 ccgtggcgcc aacaatcacg gcgccaactt cgtcgttcac cgaaccgcgc aaagttgcgc
     3781 gcgcctgtgc actgaccgtc gcgcaaatcg caaccgtaag aagaaatgca gatatgtaag
     3841 ttattagttt tctagtcatc atcaattctc tttcaaaaac tgcgagcgca gcttggtaaa
     3901 attgcgaggg cgctcattga gtttgcgtaa acggtacttg aaaaaaatca cggaccaccg
     3961 ccaccgaaca tgccgccaaa gtttccctgc aggtcaacgt tctgcggtcg cggctgtcca
     4021 ccaccggctg cctgccgttg cgcgagcatc gtcagcagcg gctcaacacc agtaaccatc
     4081 gacaccgccg tcagccgatt ttgatccgtg ccggccagtg tggacatgat gatcatgtcg
     4141 ccgactttga tctcggtgat ggcaatcgtc ggcaggcgat cgatcagatc ggccatgttt
     4201 tggcctccg
//
LOCUS       DATDBY010000067         2366 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_952863, whole genome shotgun sequence.
ACCESSION   DATDBY010000067 DATDBY010000000
VERSION     DATDBY010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_952863"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..978)
                     /gene="waaF"
                     /locus_tag="VIT19_01330"
     CDS             complement(<1..978)
                     /gene="waaF"
                     /locus_tag="VIT19_01330"
                     /inference="COORDINATES: protein motif:HMM:TIGR02195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEY5837644.1"
                     /translation="MIKAHDVSSIVVRAPNWVGDAVMSVAALRELRRLFPNSHITVVS
                     KPGTAEVFAGADYIDEVLVYERAGLKSFFDQVQKWKQREFDLALLFQNAFEAAAISFM
                     ARVPLRVGYATERRALLLSHAVPVPGWKHERHEIFYYLNLVAELEKLLTGSTLEPSAP
                     DFKISVSDNHKRQARRLLRERKAEPTKPLVLLCPGSVNSRAKRWPGERYAALADQFGD
                     LGATVALIGAPSELDVSQTVAAMTRRPPLVLTGQTSVSEVIALISIADVLITNDTGPA
                     HIGAAVGTPTLVIFGPTNPETTRPFGPAGEIIRQPPECAPCMLRECPIDH"
     gene            complement(975..1817)
                     /locus_tag="VIT19_01335"
     CDS             complement(975..1817)
                     /locus_tag="VIT19_01335"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY5837645.1"
                     /translation="MKLLVTGGSGYLGTHVRSFFNAEDLSRRSHLDVLSPLDAARVGA
                     YDGVIHLAAHLSKDPAEAEQTFRTNVEGTINLLREMEPGSVFIFASTKDVYGPHADAF
                     EEVAETCSTEYADHSALEWSKLVAEKYVQYYAAQRNFRSCIFRLSTVYARPSEGNVNG
                     VVTHYVESVKRGWPIRLPLEGKPVRDILHVDDFSRACQAFIDSPVTHGLYNLGGGKEN
                     ALSLREIIDRTAEIIQCNPVIDEENPLPPPVPLNYVSDLTRAIQELGWRPQMGIEEGL
                     RSLI"
     gene            complement(1919..>2366)
                     /locus_tag="VIT19_01340"
     CDS             complement(1919..>2366)
                     /locus_tag="VIT19_01340"
                     /inference="COORDINATES: protein motif:HMM:NF014171.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TrkA C-terminal domain-containing protein"
                     /protein_id="HEY5837646.1"
                     /translation="VYVVLTARDLNPHLHIVARAAEEQAEAKLLRAGANHVIAPTIIG
                     GHRMAVALTKPAVSEFMDSITANELGLGFEQLEVDALSPLVGQELNATPIRTELDLVI
                     VSIRRHDGETTFNPSGSVRVEAGDILIAIGRAESLMKLNTLTRRNT"
BASE COUNT          516 a          679 c          662 g          509 t
ORIGIN      
        1 atgatcgata gggcattcgc gcaacatgca aggcgcgcac tccggtggct gacgaatgat
       61 ctcgcccgcc ggaccaaacg ggcgcgttgt ttccggatta gtcggcccga aaattacgag
      121 agttggcgta cccacggccg cgccaatgtg ggcgggcccg gtgtcgttcg taatcaagac
      181 atcggcaatg ctgattagag cgatgacttc ggagactgag gtttggcctg tgagcacgag
      241 cggcggccgt cgggtcatcg cagcgacggt ttgcgacaca tcgagctcgc tcggtgcgcc
      301 aatcagggcg accgtcgctc ccaagtcccc gaattgatcc gccaatgccg cataccgttc
      361 ccccggccag cgcttggcgc ggctgttcac tgatccgggg cagagcagaa ccaatggttt
      421 cgtgggttcc gccttgcgct ctctcaaaag cctgcgcgcc tgtcgtttgt gattgtcaga
      481 aactgaaatc ttaaagtctg gcgccgatgg ttcaagggtt gagccggtta acagcttttc
      541 gagttccgcg acgagattta ggtagtagaa gatctcgtga cgttcgtgct tccatccggg
      601 gacaggcacc gcgtgactca ggagtagagc gcgccgttca gtcgcgtaac caacccgtag
      661 cggcacgcgc gccatgaatg aaatagccgc tgcttcgaag gcgttttgaa aaaggagcgc
      721 gagatcgaac tctcgctgtt tccacttttg gacctgatcg aaaaatgatt tcaaaccggc
      781 gcgttcgtaa accagcactt catcaatgta atcagcgccg gcgaagactt cggcagtgcc
      841 tggcttcgaa actaccgtga tgtgcgagtt cggaaacaaa cggcgcaact cgcgtagtgc
      901 ggcgacactc atcaccgcgt cgcctaccca gttgggcgcg cggacgacaa tgctgctgac
      961 gtcgtgcgct ttgatcaaat caaactccgc aacccttctt cgattcccat ttggggccgc
     1021 cagcctaatt cctgtattgc tcgagtcaaa tccgaaacgt aattcagcgg caccggcggc
     1081 ggcaacggat tctcctcgtc aatgaccgga ttgcactgaa tgatctcggc agtcctatct
     1141 ataatttcac gcagcgagag cgcattctct ttgccgccgc ccagattata caggccgtgc
     1201 gtcaccggcg aatcgatgaa ggcctggcag gcgcgcgaaa aatcgtcaac atgcagaatg
     1261 tcgcgcaccg gtttgccttc gagcggcagg cgaatcggcc aaccgcgctt aaccgattca
     1321 acatagtgcg tcacaacccc gttgacgttt ccttcggacg ggcgcgcgta caccgtcgaa
     1381 agccgaaaga tgcacgatcg gaagtttcgc tgcgcagcgt agtattgcac gtacttttcg
     1441 gcgacgagct tcgaccattc gagcgcactg tggtccgcgt attcggtgct gcacgtctca
     1501 gccacttctt caaacgcgtc ggcatgcggc ccgtaaacat ctttcgtcga tgcgaagatg
     1561 aaaaccgacc caggctccat ctcacgcagc aggtttatgg tgccctcgac gttcgtgcga
     1621 aatgtttgtt cagcttcggc gggatcctta ctgaggtgcg cggccagatg aattaccccg
     1681 tcgtaagccc cgacacgggc ggcgtccagc gggctaagca catccagatg agagcgtcga
     1741 gaaaggtctt cggcattgaa aaacgagcgg acgtgagtgc cgagataacc gctgccgcct
     1801 gtgactaaga gtttcaagtt tcaaatttca agtttcaagt tctcaccagc agaaatccgg
     1861 tttcaagttg gctcccggcg ttggcgtgaa cctgaaactt gaaacctgaa acttgaaact
     1921 aggtatttcg gcgcgtcaac gtattcagtt tcattaacga ctcggcgcgg ccgatcgcga
     1981 tcagaatgtc tccggcttca actcggacgg atccgctcgg attgaatgtc gtttcaccgt
     2041 catgccgccg aatgcttaca atcacaaggt cgagttcggt gcgaatcggc gtcgcgttca
     2101 gctcctggcc aaccaaaggt gacaacgcat caacctcgag ctgctcaaac ccaaggccga
     2161 gttcgtttgc ggtgattgaa tccatgaact cgctcaccgc cggtttggtt aaagcaacag
     2221 ccattcggtg gccaccgatg atcgtcggcg cgataacgtg gtttgcgccg gcgcgcaaaa
     2281 gtttagcttc cgcctgttct tcggcggcgc gcgcgacaat gtgcaggtgc ggattcagat
     2341 cacgcgccgt caaaaccaca taaacg
//
LOCUS       DATDBY010000068         4732 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1772565, whole genome shotgun sequence.
ACCESSION   DATDBY010000068 DATDBY010000000
VERSION     DATDBY010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4732
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1772565"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1429
                     /gene="murJ"
                     /locus_tag="VIT19_01345"
     CDS             <1..1429
                     /gene="murJ"
                     /locus_tag="VIT19_01345"
                     /inference="COORDINATES: protein motif:HMM:TIGR01695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEY5837647.1"
                     /translation="NFLQNVFGEGALSASFIPVYAKLLAKGDDKEATRVANAVLTLLA
                     LVTSVIVLIGILTAPYWIIVFTKSFDESTRELTIRLVRILFPGAGLLVFSAWCLGVLN
                     SHRRFFLSYTAPVAWNLAIIATLIWFGGSAEQFRLTEITAWGSVVGSALQFGVQLPTV
                     LKLVQGFRPVLDVASESVRTVLRNFFPVFISRGVVQISAFVDAILAGLISEQAVASLT
                     YAQSLYTLPISLFGMSVSAAELPAMSSALGTGDEIASQLRMRLDHGLRRIALFIVPSV
                     VAILTLGDVMVAVLYQTGQFGSEATRYVWAILAGSTIGLLASTLGRLYSSTYYALHDT
                     RTPLRFAILRVTLGMALGYVVAIHFPPLLGVDPKWGAVGLTTSSGLVGWIEFVLLRRT
                     LNRRIGRTGLAAAYMTKLWVSAIVGAALAWGIKLLIGTRHPAIVASLVLIPYGLTYFA
                     LAWLLRVPEAAAVINRTLRTLRLRT"
     gene            complement(1489..4083)
                     /locus_tag="VIT19_01350"
     CDS             complement(1489..4083)
                     /locus_tag="VIT19_01350"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEY5837648.1"
                     /translation="MRHTNLPPITWRSLTAATIALSLFLGILVSDTAQAQVNEPAAPT
                     AVTRYTRDITAAAEQGKFDSFSDQAKETSRALAILAGQNNPVLLTDSQAERNVVIGGV
                     ARQIARGQGPEELMGRRVLKLDLDKLFHDTKNAEQLKTTLTAVLSEIENSDTKVILVI
                     DPLHALIGTSAAFDATISEFVREALAAGKFQCLGASTQGTFKDAIAGDEKLASLFTAI
                     DVTETTAANETNNEEANAETADTEEFTGEKISDELREVVEAPGAPATVKVILQVSDLN
                     NPELRAKMAEWGVTATTEIARFKTIAVEIPTTAVSEIAASDWAKYVSLDRPLKGLGHV
                     ETTTGETAMLTQARNANLDGSGIGIAVLDSGISTKQKSLSGRIVLSRDFTGEGTTEDF
                     YGHGTFVASMIAAKNGPYGGLASGAHLINFRVLNREGVGSASSLINALNAVLQNRSLH
                     NIRVVNLSLGGVAVDSYKNDPLCRAVRRLVNAGIVVVAAAGNDGKDAGHAKLYGRIHS
                     PGNEPSALTVGASNTFGTDRRSDDVVATFSSKGPTRSFWKDARGVKHYDNLIKPDLVA
                     PGNKIIGASAPNNKLESQNPELCVSNCGKASSNGKSNIRLSGTSVSSPIVAGAVAVML
                     EANPRLTPNMVKMILMYTAQSLKGYNMLEQGAGELNLEGAVRLAIAVRSDFSSTTAVG
                     SQLLTSSTPVTKTTIAGETFEWSQGVIFNHNWATGAALITKYQAVYGQGVLLSDGVLI
                     SDGVLLSDNTMLSSGVLLSDNIMISKGLTMSDGLVLMTNGVLLSDGVLLSDGVLIGDG
                     VLISDGVLIGDGVLISDGRGVLIADGVLVADGVLVADGVLVADGVLVADVARNVRGDN
                     TKCMSEEF"
BASE COUNT          883 a         1353 c         1383 g         1113 t
ORIGIN      
        1 taacttctta caaaacgttt ttggcgaggg cgccctgtcg gcgtcgttta tcccggtcta
       61 cgccaagttg ctggcgaaag gtgacgacaa ggaagccacg cgcgtggcga acgcggtact
      121 caccctgctg gcgctggtga cctcagtgat tgtgctgatt ggcatcctca ccgcgccata
      181 ttggatcatt gtttttacaa agagctttga cgagagcacc cgtgagttaa ccattcgtct
      241 ggtcaggatt ttgtttcccg gcgcgggctt gctggttttt tcggcgtggt gtcttggagt
      301 gctcaacagc caccggcgct ttttcctttc ctacaccgcg cccgtggcct ggaacctggc
      361 aatcatcgcc acgctgattt ggtttggagg tagcgcggaa cagtttcgtc tgacggaaat
      421 taccgcctgg ggctcggtgg tcggcagtgc tctccaattt ggcgttcaat tgcccaccgt
      481 tctgaaactg gtccagggat ttcggccggt gttggacgta gcgagcgaaa gcgtgcgaac
      541 ggtcctgcgg aattttttcc cggtctttat tagtcgcggc gtagttcaga tttcagcttt
      601 cgtagatgcc atcctggcgg gcttaatcag tgaacaggcc gtcgcgtccc taacctatgc
      661 gcaaagcctc tacacattgc caatcagtct gtttggtatg tcggtgtcgg cggcggaatt
      721 gccggcgatg tcgagtgcgt tgggcactgg tgacgaaatc gcttctcagt tacggatgcg
      781 cctcgatcac ggtctgcggc gaattgcact attcatcgtg ccttcggtag tcgcgatcct
      841 aacgctgggt gatgtgatgg tcgccgttct ttaccagacc ggccagtttg ggagtgaggc
      901 gactcgatac gtttgggcga tcctggcggg ttcgacaatc gggttgttgg cttcgacgct
      961 cggcaggctt tactcctcga cctactacgc tcttcacgac acgcgcacgc ccctgcgctt
     1021 cgctattctg cgcgtcactt tgggaatggc cctcggctac gtcgtcgcga ttcacttccc
     1081 accattgttg ggcgtcgatc ctaaatgggg agccgttggc ctgactactt cgtccggatt
     1141 ggtgggttgg attgaatttg ttttgttgcg tcgaacgcta aatcgaagaa tcggccgcac
     1201 gggactggca gccgcataca tgacgaagct ttgggtttcg gcaatcgttg gcgccgcgct
     1261 cgcctgggga atcaagcttc ttatcggcac gcggcatccg gccattgtcg cgtcactggt
     1321 gctgataccg tacggcctca cgtactttgc tctcgcgtgg ctgttgcgcg ttccggaagc
     1381 cgccgccgtt attaatcgaa ctcttcgcac gctccgtttg agaacctaat cggcaaacaa
     1441 aaaggcccca ccgaagtgga gccttaagag ttccgcgtgt cggggtaatt agaattcctc
     1501 tgacatgcat ttggtgttat cacctcggac gttgcgtgcg acatcggcaa caagtacacc
     1561 atcggcaaca agtacgccgt cagcaacaag tacaccatcg gcaacaagta cgccgtcagc
     1621 aatgagcacg ccgcgaccgt cgctgatcag cacgccatcg ccgatcagaa cgccgtcgct
     1681 gatcagcacg ccatcgccaa tcagaacacc gtcgctgagc aacacgccgt cgctgaggag
     1741 aacgccattc gtcatgagga cgaggccgtc actcatcgta aggcctttgc taatcatgat
     1801 gttgtcgctg agcagcacgc cactcgacag catcgtgttg tcgctcaaca gcacgccatc
     1861 agagatcagc acgccatccg acaagagaac gccttgaccg taaacggcct ggtatttcgt
     1921 gatgagcgcc gcgcctgtgg cccagttgtg attgaaaatg acgccctgcg accattcgaa
     1981 cgtctcgccc gcaatggtcg tcttcgtgac cggcgtcgaa ctggtcaaaa gctgcgaacc
     2041 gacagcggtt gtgctggaaa agtcgctccg cacggcaatc gccagtcgca cagcgccttc
     2101 caggttcaac tctcccgcgc cctgctccag catgttgtag cccttcaatg actgcgccgt
     2161 gtacatgaga atcatcttca ccatgttcgg tgtcagacgc ggattggctt cgagcatcac
     2221 tgccactgcg cccgcgacga tcggcgaaga aaccgaagtc ccgctcagac gaatgttgct
     2281 tttgccgttg ctggaagcct tgccgcaatt tgagacgcac agctcgggat tctgtgactc
     2341 gagtttgttg ttcggggccg acgcgccgat gattttgttg ccgggagcaa cgaggtcggg
     2401 cttgatcagg ttgtcgtagt gcttaacgcc acgcgcatct ttccagaagc tgcgggtcgg
     2461 accttttgaa ctgaaggtcg cgactacgtc gtcgctgcgc cggtcggtgc cgaaagtgtt
     2521 cgacgcgcca acggtgagcg ccgagggctc gttaccgggc gagtgaatcc ggccatacag
     2581 ttttgcgtgc cccgcatctt tgccgtcatt tccggctgcg gcgactacca cgatgcccgc
     2641 gtttaccaag cggcggaccg cgcgacacaa cggatcgttc ttgtacgaat cgaccgcgac
     2701 tccgccgagg ctcaggttca ccacgcggat gttgtggaga ctgcgatttt gcaacacggc
     2761 attcagcgcg ttaattaacg aggacgccga gccgacgcct tcccggttca gcacgcggaa
     2821 gttaatcagg tgcgcgccgc tcgcaagacc gccgtacgga ccgttctttg cggcgatcat
     2881 cgaggcgacg aaggtgccgt ggccgtagaa atcttccgtg gttccttcgc cggtgaagtc
     2941 gcggctcaga acaatgcgtc cactgagact cttttgctta gtcgaaatac ctgaatccaa
     3001 aacggcgatg ccaatgccgc tgccgtcgag gttggcattg cgcgcctgcg tcagcatggc
     3061 tgtttcaccg gtcgtcgttt cgacgtgacc caggcccttc aatgggcgat cgagcgatac
     3121 gtactttgcc cagtcacttg ccgcgatttc cgaaactgcg gtggtcggaa tctcaaccgc
     3181 aatagtcttg aatcgagcga tctcggtggt ggctgtgaca ccccactccg ccatcttcgc
     3241 gcgaagctct gggttgttca ggtcactgac ctgaaggatt actttcaccg tagccggcgc
     3301 accgggagct tcaacaactt cgcgcaactc atcagagatc ttttcgccgg tgaactcttc
     3361 agtgtcggcg gtttcggcgt tagcctcttc gttgttcgtt tcgttagctg cggtcgtttc
     3421 cgtgacgtca attgcggtaa acagcgacgc cagcttctcg tcgccggcta tcgcgtcttt
     3481 gaatgtgccc tgtgtcgaag cgccgaggca ctggaatttg ccggccgcga gcgcttcgcg
     3541 cacaaattcg gaaatagtgg cgtcaaacgc ggctgacgtt ccgatgagag cgtgaagggg
     3601 atcgataacg aggatgactt tggtatctga attttcgatt tcggagagaa ccgctgtcag
     3661 cgtggttttg agctgttctg cattcttagt gtcgtggaac agcttgtcca ggtcgagctt
     3721 caacacgcgg cggcccatca attcttccgg cccttgtccg cgagcgatct gacgggctac
     3781 tccgccgatg acgacgttac gctcagcctg cgagtcggtg agcaaaacag gattgttttg
     3841 cccggccaga atcgccagcg cgcggctggt ctctttagcc tggtcgctaa acgaatcgaa
     3901 tttcccctgt tcggcggcgg cagtaatgtc gcgggtgtat cgcgtgacgg cggtgggggc
     3961 ggcgggctcg ttaacctgcg cctgggcggt gtcgctgacc aggattccca gaaagaggga
     4021 aagggctatc gtcgccgctg tcagcgaccg ccaggtaatc gggggtaggt ttgtgtgtct
     4081 cattttgaag cgtctctcgc ttttttcgtc ttcgacggcg cggaatgcag aattcccgca
     4141 ccatgctgta aaccaaggcg cgtgccatga ccgaaagtgc gatttatggg cggtttttgt
     4201 agaattccga cttttggcgg atcggtcaat tcggtcagca tgaaagcttt ttttcagtct
     4261 gaccgacaga ttcggcgaga aaacgaggtg ttacggaaat atttttggag aagagccggc
     4321 attgtttctt tagttaggca tcccggaaag acggattggt tggcgcagcg gcaagcggcg
     4381 gggaaaaccc ctggccgctc gttttgtatt tggagtgtct gggagcgcgg gcatcctgcc
     4441 cgcatgccgt tacgcgcgca catccccgcc ctggccgctg aggacgtagc gttaaagaat
     4501 ttggaggcag gacgagcacc ccagccgggc tgcccggccg gggaccccgc ttgcctgcgc
     4561 tcccagcggc cctctaattg accctcctcc agccttctcc ttatcatcgc cgcgtgcaac
     4621 ccgttcttag ttcagcgcag atgcgcgaaa tcgaccgcgt gacgaccgag cgttacggca
     4681 tcccttcgct cgtgttgatg gagaacgccg ccgccgcgac cgcgcgagtt at
//
LOCUS       DATDBY010000069         2407 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1975307, whole genome shotgun sequence.
ACCESSION   DATDBY010000069 DATDBY010000000
VERSION     DATDBY010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1975307"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..929)
                     /gene="mdh"
                     /locus_tag="VIT19_01355"
     CDS             complement(<1..929)
                     /gene="mdh"
                     /locus_tag="VIT19_01355"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: protein motif:HMM:TIGR01763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEY5837649.1"
                     /translation="MGTRNKITVVGAGNVGATAAHWLASKELGDVVLVDIVEGVPQGK
                     ALDLAETAPIEGFDVRLIGSNGYDETNDSDVVIITAGLARKPGMSRDDLLKTNADIVG
                     KVVDEIVKRSPNTILIIVSNPLDAMCQVALRRSGFPKHRVIGMAGVLDSARMRCFLAE
                     ALDVSVENVTAFVLGGHGDTMVPLPRYSTCAGIPITELLSKDQIDAIVKRTAGGGAEI
                     VALLKTGSAYYAPSAAAVEMTESILKDKKKILPCAAYLEGEYGVNGLYVGVPCKLGAK
                     GLEQVIEITLTAEERIALQKSAASVQELIDVLG"
     gene            1308..>2407
                     /locus_tag="VIT19_01360"
     CDS             1308..>2407
                     /locus_tag="VIT19_01360"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEY5837650.1"
                     /translation="MSNDLTTKSATELVALISSRAVSPVEVVEAHLRRIEQVNPALNA
                     IVTIAEDAIDRARVCEAALMSGNDVGPLHGLPVTVKDTIHTTGLRTTSGSRIRAHHVP
                     ERDAASVARLKAAGAIILGKTNTPEMAVPYETDNPVFGRTNNPHNPLTTPGGSSGGEA
                     AAIAACLSPAGLGSDLSGSIRVPAHFCGIAGLKPTTGRVAMDGHTPAAPGVVALGASI
                     GPMARRVQDLALLFKVLAEPTQFEAAENSVDVLNPTALRGLRVAWYTDDGVTPVSDET
                     RAAVQSAAKALADAGLQLTEMTPPGVAKSSRLWIDLFSRAANSEIAALYQGREVEAGP
                     QVARLLREFNHTTTDFQEKIEKAERLAAAVLER"
BASE COUNT          502 a          710 c          696 g          499 t
ORIGIN      
        1 attccgagga cgtcgatcag ttcctgcacg gacgcggcgc tcttctgcaa agcgatgcgt
       61 tcttcggccg tcagcgtaat ctcgatcact tgctcgaggc ccttcgcgcc gagcttgcag
      121 ggcacgccga catacagacc gttcacgccg tactcgcctt ccagataagc cgcacacggt
      181 agaatctttt tcttgtcttt gagaattgat tcagtcattt caaccgcggc cgccgacggg
      241 gcgtaatacg ccgagccggt tttcagcagc gcgacgattt ccgcgccacc gcccgcagtg
      301 cgcttcacaa tcgcgtcgat ttgatccttc gacaagagtt ctgtgatggg aattcccgcg
      361 caggtcgagt aacgcggcag cggcaccatc gtgtcgccgt gaccgccaag tacgaaggcg
      421 gtgacgttct caacggaaac atccagcgct tcggcgagga aacaacgcat gcgggccgag
      481 tccaacacgc cggccattcc gatcacgcga tgtttcggaa atcccgagcg gcgcagcgcc
      541 acctgacaca tcgcatcgag cgggttcgaa acgattatga gaatggtatt tggcgaacgc
      601 tttacgattt catcgacgac cttaccgacg atgtccgcat tggtttttaa aagatcgtcg
      661 cggctcattc ccggcttacg ggccagaccc gccgtaatga tgacgacgtc tgaatcattt
      721 gtttcgtcgt agccgttcga gccgattagc cgcacatcga agccttcgat cggcgccgtc
      781 tcagccaaat ccagggcctt gccctgcggc acgccttcaa caatgtcgac cagcaccacg
      841 tcgccaagtt ctttcgacgc taaccaatgc gccgccgtcg cgccgacgtt tccggcgcca
      901 actactgtga ttttatttcg agttcccata aatgcgatcc tctctggtgg cacagacttc
      961 agtctgtgat cgttatcaaa tctaactctt gaaccacaga ctgaagtctg tgccacaaat
     1021 gcggattgtt gattgcttga gcgccctttg cgcgcgcaat gtttatagtt caaacgttgg
     1081 gacttttcaa agtggaccgg cgcgtacttc cgatgcgacc agggttccta ttcacaccgt
     1141 ggctttagcc cggtgttcgg aaacggcaac aaagccgaaa accgtttaaa cggttttcag
     1201 tccggagcca acgccaccac gccgcgctaa agcggcggcg tgactgagaa gttttgtcaa
     1261 actcgatcaa tccattataa atggctcgct cgctgataac tttcaacgtg tctaacgatc
     1321 taacaactaa atccgcaact gaactggtcg cgttgattag ctcgcgagct gtttcacccg
     1381 tcgaagtggt tgaagcgcac ctgcgccgaa ttgagcaagt gaatccggcg ctgaacgcga
     1441 tcgtgacgat tgccgaagat gcaatcgatc gcgcgcgcgt gtgcgaggcg gcgctgatga
     1501 gcggaaacga cgtgggcccg ttgcatggtc taccggtcac ggttaaggac acgattcaca
     1561 ctacgggcct gcggacgacg agcggctcgc gaattcgtgc gcaccacgtt ccagagcggg
     1621 acgcggcttc ggttgcgcga ctgaaagcgg cgggcgcgat aatcctcggc aagacgaaca
     1681 cccctgagat ggccgttccg tacgagacgg acaacccggt tttcggccgt actaataatc
     1741 cccataaccc gctaacgaca cccggcggat caagcggagg tgaagccgcg gcgattgcgg
     1801 cgtgtctttc gccggctggc ctcggcagcg atctttccgg atcgattcgg gtgcccgcgc
     1861 acttttgcgg catcgccgga ctgaaaccga cgacaggccg ggtggcgatg gacggacata
     1921 cgccggccgc tcccggcgtg gttgcgctgg gcgcatctat cgggccgatg gcgcggcgag
     1981 ttcaggatct cgcgctgctt ttcaaggtgc tcgccgagcc gacgcaattt gaggccgcgg
     2041 aaaactcggt agacgttctg aatccgacgg cgctgcgcgg tttgcgcgtg gcctggtaca
     2101 cggacgacgg agttacacca gtctcagacg agacgcgcgc ggcagttcag agtgccgcta
     2161 aggcgctggc tgacgcgggc cttcaattga ccgaaatgac tcctccggga gtcgcaaaaa
     2221 gttcgcggct ttggatcgat ttgttttcac gcgccgcgaa cagcgaaatc gctgcgctgt
     2281 accagggaag ggaagtcgag gcaggaccgc aggtagctcg tctgctgcgc gagttcaatc
     2341 atacgacgac cgacttccaa gagaagattg aaaaggccga gcggttggcc gctgccgtgc
     2401 tcgagcg
//
LOCUS       DATDBY010000070         5382 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_102778, whole genome shotgun sequence.
ACCESSION   DATDBY010000070 DATDBY010000000
VERSION     DATDBY010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5382
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102778"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1145)
                     /locus_tag="VIT19_01365"
     CDS             complement(<1..1145)
                     /locus_tag="VIT19_01365"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5837651.1"
                     /translation="MKIVLLTLSGNPDLARERLAAQFPDAAVESMARAQFEKGSIAAR
                     TSALRRRQPEVFAVATERLVWQRGQDAFLLLGALAGARQSILLDVHNGWREESKASAL
                     LRAPIRLARDFATSNAALRRAESDLRKLEAAVERGEHRPAVSGPDGQPPRVTYLRSSP
                     GPGTQAGGAASHINGFVNAAVQRGVQVSLISNDEIAGLDQRRVPMKIIWPKPIGSTRA
                     AFDIYNNLHFTERVLSAIQNEQPDFIYQRYARFSWAGVAAALRTKRPLFLEYNGSEVW
                     VGRHWDRVDKLDLLARYERLNLNAAARIFVVSEVERQNLLKAGIEPEKIIVNPNGVDV
                     NRFKPGIGGDEARRKLGLPPDEIVVGFVGTFGPWHGVEVLAQAITQIP"
     gene            complement(1142..1906)
                     /locus_tag="VIT19_01370"
     CDS             complement(1142..1906)
                     /locus_tag="VIT19_01370"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY5837652.1"
                     /translation="MSAAAENENLWGYRKRLQFVLRVMREAFPGQFPGALRVLDVGCG
                     NGSQLALPLARHGVAVTGVDTDAKSIAHARELARDTRSARFETTSVNELSEGVFDVVI
                     LSEVLEHVNNPREFLRAAVSHLTEGGLVIVTTPNGFGEFEWDSWLFRLLRAQKVVDAM
                     VRSHQPPLAATDNDSSGHVQFFTRGRLFKIFSSCELKVWRAQAATLFAGPFAGHSVAR
                     SQRFVEWNARVADKLPMALASGWYFALRRIGPEAPQ"
     gene            complement(1903..3276)
                     /locus_tag="VIT19_01375"
     CDS             complement(1903..3276)
                     /locus_tag="VIT19_01375"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEY5837653.1"
                     /translation="MPTPLETAATVSLDETPVPGSFVSRVVLTFGTRLLMMVGVFGSG
                     VIVARWLGDEGFGAYAVLSVMVALAVQIGSAGLPSANTFFLARDRTTLGPLFANALVF
                     GLVVGSILAVGVLGLNWIRPSVFGKVSTQLVAVAAVSIPFQLLILLGLNILLAIDRIR
                     QLNLFDALLPAWVFANAVVVLIILRERLFTLVFANTGAAIVLGLLLTFYIGREVSQSK
                     HPRKARVDLQLFKEMLRYGVKFYVSIMAAAIIFRADVLIVNRFRGAAEAGVYAVASQF
                     SFLLLMLPGVIATLLFPRVASSSDQTGEFAVRLTRHTTMIMLILCSGAVAISFVLPLI
                     YGAPFADATVQFLMLLPGIFFMGLESVLVQHFTGTGLPRAIPIFWLITLVFNIGLNLV
                     VVPAFGGRGAAVTSSLTYALIFTLVTVYFCRKTKRGPGEIFLWRSDDLRALRRMAGAR
                     LHRSTTQ"
     gene            complement(3455..>5382)
                     /gene="asnB"
                     /locus_tag="VIT19_01380"
     CDS             complement(3455..>5382)
                     /gene="asnB"
                     /locus_tag="VIT19_01380"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HEY5837654.1"
                     /translation="MCGISGVWEYGAARGNVGRELLVSMRDVMKHRGPDDAGELVFDD
                     ARGGFGFRRLSIIDLSEAGHQPMRACTDRVWLVFNGEIYNHASLREGLEQRGHAYRSR
                     TDSETILHLYEERGLDFVQDIEGDFGIAIWDADRERLVLARDRAGVKPLYFYQADGRF
                     IFASEIKAILQHPAVTAEVNEEALYHYLTLLTTPAPQTLFRGIQKIPAGHMLVVERNG
                     EVRLTQYWDALPPESAVAGISEEEHQHRILELLRESIKKRMMADVPFGVFLSGGVDSS
                     ANVALMSELMTQPVRTFTVGFHDTEELNELEAARSLSKRYNTDHHEVIIGREEMEKFL
                     PELVFHQDEPIADPVCVPLYYVSKLARDSGTIVVQVGEGSDEIFGGYDWFGTYLRIEE
                     RFWRYAERAPLAARRAAAAVAVPLAQKAFKKQKAGELIRRLGKDQALFWGGVGVFDET
                     TKPKVLSSELRARYNGLSTHDVVRHYLDHIGRARPDSDFAARMTYLELKLRLPELLLM
                     RVDKITMATSVEARVPFLDHHLIEYAMGLPRDVKVKGKTGKHILKRALEAILPKDLLY
                     KPKRGFGAPAREWFRGPNADELLQLIMNSRMRSRNFFDYQFVQQLADEHQRERQDWSA
                     HLWALLNVSVWYDRWIK"
BASE COUNT         1235 a         1628 c         1480 g         1039 t
ORIGIN      
        1 ggaatttgag tgatcgcttg cgcgagaact tcgacgccgt gccacggtcc gaacgtgccg
       61 acaaagccga ctacgatttc atcgggcggc agacctaatt tgcgccgtgc ttcatctccc
      121 ccgatgcccg gtttgaatct attgacgtca acaccgttcg ggttgacgat gatcttttca
      181 ggttcgatcc ctgccttcaa aaggttctgt cgctctactt ctgaaacgac gaagattcgg
      241 gcggcggcgt ttaggttcag acgttcatat cgcgccagca gatccagctt atctacgcgg
      301 tcccagtgtc ggccgaccca aacctccgat ccattgtatt caagaaacaa cggccgcttc
      361 gtgcgcagcg cagccgcgac gccggcccaa ctaaaccgcg cgtaacgttg ataaataaag
      421 tccggctgtt cgttttgaat tgccgacagg acgcgctcgg tgaaatgcag gttgttatag
      481 atgtcgaacg ccgcgcgggt tgatccaatc ggtttgggcc agatgatttt catcggaact
      541 cttcgttgat ccagcccggc aatttcgtcg ttactaatca acgaaacttg tacaccgcgt
      601 tgcactgccg cgttgacgaa tccattgatg tgactggcgg cgcctcccgc ttgcgttccc
      661 ggaccgggcg aagatcgcag gtacgtgacc ctcggaggct ggccgtctgg tcccgacact
      721 gctggcctgt gctcgccgcg ttccaccgct gcttcgagct tccgcagatc gctctctgca
      781 cgtcgcagcg cggcgttact cgtcgcaaaa tcgcgcgcca gacggatagg cgcgcgcagc
      841 aaggctgacg cttttgattc ttcgcgccaa ccattgtgca cgtcgagaag tattgattgc
      901 cgcgcaccag ccaacgcgcc cagcaacaag aaagcgtctt gtccacgttg ccaaaccagt
      961 cgttcggtcg cgacggcgaa gacttcaggt tgtcgccggc ggagggcgct ggttcgggcc
     1021 gcgatcgagc ctttttcaaa ttgcgcgcgc gccatgctct caacggcggc gtccggaaac
     1081 tgcgcagcga ggcgttcgcg ggcgagatcc ggattgccgc tcaaggttag taacacgatc
     1141 ttcattgagg tgcttccggc ccgatgcggc gtaacgcgaa gtaccagccg ctggcgagcg
     1201 ccatcggtaa cttatctgca acccgagcgt tccactcgac gaagcgctgc gagcgcgcca
     1261 cagaatggcc agcaaatggt ccggcgaaca gtgtcgccgc ctgcgcgcgc caaaccttta
     1321 gttcacacga cgagaaaatc ttgaagagcc ggccccgggt gaaaaactgc acgtggccgc
     1381 tactgtcgtt gtccgtcgca gccagaggcg gttggtgact tcggaccatc gcatcgacga
     1441 ctttttgggc ccgcagcaaa cgaaagagcc acgagtccca ctcgaattca ccaaagccat
     1501 ttggcgtagt gacaatcaca agcccacctt cggtcaaatg gcttacggcc gcgcgcagga
     1561 attcacgtgg attgttaacg tgttccagca cttcagaaag gatgacgaca tcaaaaaccc
     1621 cctcgcttag ttcattgacc gacgtagttt cgaatcgagc cgaacgagtg tcccgggcca
     1681 gttcgcgggc gtgggcaatc gacttcgcgt ccgtatcaac gccggtgacc gctacaccgt
     1741 gacgcgccag cggcagtgca agctgtgatc catttccgca gcccacgtcc aatacgcgca
     1801 gagcgccggg aaattgtcca ggaaaggctt cgcgcattac gcgcaacacg aattgaaggc
     1861 gcttgcgata accccaaaga ttctcgtttt ctgcggccgc actcactgcg tggtgctcct
     1921 gtgaagacga gcgccggcca tccgtcgcag agcgcgaaga tcgtcactcc gccaaagaaa
     1981 aatctcgccc ggtccccgct tcgtcttacg acagaaataa acggtgacga gagtgaagat
     2041 gagcgcgtag gtcagcgagg aagtaacggc cgcgcctcgc cccccgaacg caggcacaac
     2101 caccaggttg agtccgatgt tgaagacgag cgtgatgagc cagaagatgg gaatcgcgcg
     2161 cggtaatcct gtgccggtga agtgttgcac cagcactgat tccaacccca tgaagaaaat
     2221 tcccggtaaa agcattagga attgcacagt tgcatcagcg aacggcgcgc cataaatcag
     2281 cggcagcacg aacgatatag ccacagcgcc gctgcaaaga atcaacatta tcatcgtcgt
     2341 atgacgcgtc agccggacgg cgaattcgcc ggtctgatct gacgatgatg cgacgcgtgg
     2401 aaacaaaagc gtcgcgatga cgccaggcaa catcagcaac aggaaagaga attgcgaagc
     2461 gacggcgtaa acaccggctt cggcagcgcc gcgaaagcga ttcacaatca gcacgtccgc
     2521 gcgaaagatt atggcagccg ccataatcga cacgtagaac ttcacgccat agcgaagcat
     2581 ttctttgaaa agttgaagat caactcgcgc tttgcgtggg tgcttgctct gcgaaacttc
     2641 acggccaatg tagaaagtta acagcaggcc caggacaatc gccgcaccgg tgttggcaaa
     2701 gacgagggtg aaaagccgtt cgcgcaggat gattagcacc acgacggcgt tcgcgaatac
     2761 ccaggccggc aacagcgcgt cgaacagatt cagctgacgg attcgatcga tggcgaggag
     2821 tatgttgaga ccgaggagaa tcagcagttg aaatggtatc gaaaccgctg cgacggccac
     2881 cagttgcgtc gaaaccttgc cgaagactga cggcctaatc caattcaagc cgagcacgcc
     2941 aaccgcgagt atgcttccga caaccaatcc aaagacgagc gcattcgcga agagcggccc
     3001 gagcgtcgtt cgatcgcgcg cgaggaaaaa cgtgttcgcg gatggcaaac cagcgctgcc
     3061 aatttgcacg gcgagcgcca ccatcacact caataccgcg taggctccga agccctcatc
     3121 gccaagccac cgcgcaacaa tcacccccga gccgaacacg ccaaccatca tcaagaggcg
     3181 agtgccgaag gtcagcacca ctctcgatac aaagctgccg gggaccggcg tctcgtccag
     3241 cgaaacggtg gcggcggttt ctaaaggggt aggcatgtag ctactcgcgg ctttgccgcc
     3301 tgatgtgcgg aaggcctgtg gccttccgga tcattcctca agaagttcct cgttttggcg
     3361 aggctcggcc tcgccaaaac gaaaagaaaa aagagagcct caaccggaaa ggcatagcct
     3421 ttccgcacat caggcggcag agccgccaac cttgtcactt aatccaccgg tcgtaccaaa
     3481 cgctcacgtt gagcagcgcc caaaggtgcg cgctccagtc ctggcgttcg cgctgatgct
     3541 cgtccgccag ctgctggacg aattggtaat caaagaaatt tcggctgcgc atgcgcgagt
     3601 tcattatgag ttgcagcagt tcgtcggcgt tcggtccacg aaaccattcg cgagccggcg
     3661 caccgaagcc gcgcttgggt ttgtaaagca aatccttcgg cagaatcgct tccagcgcgc
     3721 gcttgagaat gtgctttccg gtcttgcctt tcactttcac atcgcgtggc aggcccatcg
     3781 cgtactcgat caaatgatga tcgagaaaag gcacgcgcgc ttccaccgat gtcgccatcg
     3841 tgatcttatc gaccctcatc agcaacagtt cgggcagacg cagttttaac tcgagatagg
     3901 tcattcgcgc cgcgaaatct gaatccggcc gcgcgcgccc gatgtgatcc aggtaatgcc
     3961 gcacgacgtc gtgagtcgat aatccgttgt aacgcgcgcg aagctctgac gagagcactt
     4021 tcggctttgt cgtttcgtcg aacacgccga cgccgcccca aaacagtgct tgatctttcc
     4081 cgagacgccg gattaactcg ccggcttttt gtttcttgaa cgccttctgc gcgagcggaa
     4141 cagcaaccgc cgcagcagca cgacgcgccg ccaaaggcgc gcgctcggca taacgccaaa
     4201 acctctcttc aattcgcaaa tacgttccga accaatcata gccgccgaaa atttcgtctg
     4261 agccttcgcc cacctgcacc acgatcgtcc ccgagtcgcg cgccagtttc gagacgtaat
     4321 aaagcggcac gcacaccgga tcggcgatgg gctcgtcctg gtgaaagacg agttcgggaa
     4381 gaaacttctc catctcttca cggccgatga tcacttcgtg atggtccgtg ttgtaacgct
     4441 tcgagagaga gcgcgcggcc tccagctcat tcagctcttc cgtgtcgtga aagccgaccg
     4501 tgaaagtgcg cacgggctgc gtcatcaatt cggacatcaa ggcgacgttc gctgaagagt
     4561 cgacaccgcc ggaaagaaaa acaccgaatg gcacatcggc catcattcgt ttcttgatcg
     4621 actcgcgcag taactcgaga attctgtgtt gatgttcttc ttccgaaatg ccggcgacag
     4681 ccgactcagg cggcagcgcg tcccagtact gcgtcagacg cacttcacca ttccgctcga
     4741 ctaccagcat gtgaccagca ggtatttttt gaatgccacg aaaaagagtc tgcggcgcgg
     4801 gcgtcgtcag gagcgtgagg tagtgataga gcgcttcttc gttgacctca gccgtgactg
     4861 ccggatgttg caggatggct ttgatttccg acgcgaagat gaagcggcca tcagcctggt
     4921 agaagtagag cggtttcacg ccggcccgat cgcgcgccag cacaagccgt tcgcgatccg
     4981 catcccagat cgcaatcccg aaatcacctt cgatgtcctg aacaaagtcg aggccgcgct
     5041 cttcgtaaag atgcagaatc gtctcggaat cggtgcgcga cctgtaagcg tgaccgcgtt
     5101 gttccaatcc ttcacgcaac gaagcgtggt tgtaaatttc gccattgaaa accagccaca
     5161 ctcgatccgt gcacgcgcgc atcggttgat gcccggcctc cgacagatcg atgatcgaca
     5221 aacggcgaaa tccaaaaccg ccacgagcat cgtcgaaaac cagctcaccg gcgtcatccg
     5281 gcccgcggtg cttcatcacg tcgcgcatcg acacgagtaa ctcgcgcccg acattgccgc
     5341 gcgccgcgcc gtactcccaa actccgctga tgccacacat aa
//
LOCUS       DATDBY010000071         3836 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2179710, whole genome shotgun sequence.
ACCESSION   DATDBY010000071 DATDBY010000000
VERSION     DATDBY010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3836
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2179710"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..1585)
                     /locus_tag="VIT19_01385"
     CDS             complement(104..1585)
                     /locus_tag="VIT19_01385"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEY5837655.1"
                     /translation="MPPPLGDMPAEEFRRHGHELIDWIADYFERIDDLPVLAQVEPGE
                     LKSQLPTSPPEKGESMEAILADVNRLILPALTHWSHPSFFAYFATSTSAPGIFGELLS
                     AAFDTKALNWRAAPAATELEDVTLGWLRQMMGLPETFGGIIYDTASVSTLHALAGARE
                     NLSLRIREDGMAGRPDLPLLRVYTSEHAHSVVDKAAMTLGLGQRSVRKIAADAEFRMD
                     PAALSRAIQDDSEAGFLPFAVVATVGTTSTSSIDPISAIADICGHERLWLHIDAAYAG
                     SAAIVPEFRHLFNGCERADSFTLNPHKWLFTPFDLSVLFCRHMEILHRAFSLVIEVLR
                     TSEAERNTVINHSEYGIQLGRRFRALKLWMIIRYFGHEGLAARIREHVRLAQLFASWV
                     EESPDWELMAPAPFALVCFRAKPGGSQSGEIGKPTDILNETIMHALNATGKAFLSHTK
                     LNDTLVLRLSIGNIRTTEVHVRRVWELLNEQLRRLQAEAPLNK"
     gene            complement(1683..2066)
                     /locus_tag="VIT19_01390"
     CDS             complement(1683..2066)
                     /locus_tag="VIT19_01390"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEY5837656.1"
                     /translation="MTENEVAKHIVDVAYKLHSTYGPGLLESVYEAIMAHELSKRGLA
                     VTRQQPIPLVHESVRMGVGFRADLIIDKKVVVEIKSIEAIGPVHKKQLLTYLRLADKK
                     LGLLINFNVELIKNGISRVVNQLPE"
     gene            complement(2167..2352)
                     /locus_tag="VIT19_01395"
     CDS             complement(2167..2352)
                     /locus_tag="VIT19_01395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837657.1"
                     /translation="MATAKEEVERLLGKLPNDCSLEDIQYHLYVLEKARNGLKSADTE
                     GGIPQDDAEERLSKWLI"
     gene            complement(2386..3618)
                     /locus_tag="VIT19_01400"
     CDS             complement(2386..3618)
                     /locus_tag="VIT19_01400"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY5837658.1"
                     /translation="MANKDAKILILGGGFGGLFTVLDLAGAGEIMLVSDEDHFTFKPM
                     LYEYLSGEVEAWHIAPNYSELLDDVKVVRGAVTSIDLDNRAVTIEGRAAPLTCDALVL
                     ALGATTNYWGVKGAEQFSLPFRTIADANHLRRRLTEALDGIQPDAAPQDTRAALTFAV
                     VGGGASGVELATKMSDLLRDAVKRRALRGEPRVLIIEMADRLVPGMGVEIREHVEREL
                     AEQRIEIHTQTRVAHVAANVLTLEHNGRESDIEVAGVVWVAGVRMNPLIENLKVEKDK
                     RGLIIVEPTLQVRNHPNVFTLGDIASYPDVPPTLAGTAQLALQQAHLCARNVRASLTG
                     DELKTKHFVELGEALSLGTEHAAVLSAGKVMAGPLARQARFAMYTARLPTWHHRLKVG
                     ASWFFEGTQPRPLQPLGF"
BASE COUNT          815 a         1057 c         1112 g          852 t
ORIGIN      
        1 atcgtatttt gcagacgctt caggcgatac cggcgatacg caaacggcgc ctgcaacaat
       61 acgacgataa cgagcagggc gagcaggaac ttgcggcggc gggtcattta ttcaggggtg
      121 cttcggcttg cagacgccgg agttgttcgt tcagcaattc ccacacgcgg cggacgtgta
      181 cttcagtcgt gcggatgttg ccgattgaaa gacgcagcac cagtgtgtcg ttgagttttg
      241 tgtgcgaaag aaaggcttta cccgtagcgt tcaaggcatg catgatggtt tcattcagta
      301 tatccgttgg tttgcctatt tcgcctgact ggctgccccc aggttttgcc cgaaaacaaa
      361 ccaatgcgaa cggcgcgggc gccatcaact cccaatccgg cgactcttca acccacgacg
      421 cgaagagctg tgccagccgg acgtgttcgc gaatgcgcgc ggcaagtcct tcgtgaccga
      481 agtaacggat gatcatccag agtttcagcg cacgaaagcg acgaccaagc tgaatgccat
      541 actccgaatg gttaatgacg gtgttgcgct ctgcttcaga tgtgcgcagg acttcgatca
      601 ccaacgaaaa agcgcgatgc aggatctcca tgtgacggca aaacagtacc gacaggtcga
      661 acggggtgaa taaccatttg tgcggattca gggtgaacga gtcagcccgt tcgcagccat
      721 taaataggtg tcggaactca ggaacgatcg cggctgaacc ggcgtacgct gcgtcgatgt
      781 gcagccaaag tctctcgtga ccacaaatgt ccgcgatggc tgaaattgga tcgatgctgc
      841 tggtcgaagt tgtgcccacg gtggcaacca ctgcgaatgg cagaaatcct gcttcgctgt
      901 cgtcttgaat tgcgcgacta agtgcagctg ggtccatgcg gaactcggcg tccgcggcaa
      961 tcttgcggac cgagcgttgg ccgaggccca gagtcatcgc agctttatcg acaacggagt
     1021 gcgcgtgctc tgaggtgtaa acgcggagaa gcggcaggtc cggacgcccg gccatgccgt
     1081 cttcgcgaat ccgcagactg agattctcgc gcgccccagc caaggcatga agcgtcgaaa
     1141 ctgaagcagt gtcgtagatg attccaccga acgtttccgg cagtcccatc atctgccgta
     1201 gccaaccgag cgtcacatcc tcaagttcag tagcggcggg cgcggcgcgc cagttcaaag
     1261 ccttcgtgtc aaaggccgcg gacaacagct cgccaaaaat ccccggggcg gaggttgaag
     1321 tggcgaagta agcgaagaat gaaggatggc tccagtgagt gagcgcgggc aggattaggc
     1381 ggttcacgtc ggccaggatc gcttccatgg attcaccttt ttccggcggc gaagttggca
     1441 attgcgattt cagctcacct ggttcgacct gcgccagcac gggcagatcg tcgatgcgtt
     1501 cgaagtaatc ggcgatccaa tcgatgagct catggccgtg gcgacggaat tcctcggccg
     1561 gcatatcgcc gaggggtggg ggcatttctt cagggttgtt tgcgggactt gtcacttggt
     1621 cttgttctct ttgcgttcct ttgcgtcttt gcgcctttgc gtgcgactta tcgtgtgcac
     1681 cctcactctg ggagctgatt taccactcga gaaatcccat tcttgatcaa ttccacgttg
     1741 aaattgatca gcaaaccaag cttcttgtca gccagtctga ggtaggttag cagttgcttc
     1801 ttgtgaaccg gcccaatagc ttcaatagat ttgatttcga ccacgacctt cttgtcgata
     1861 atcaggtcgg ctcggaatcc aacacccatt cgtacggact cgtgaactag ggggatcggc
     1921 tgttgtctag ttaccgctag gccgcgctta ctgagttcgt gagccatgat ggcttcataa
     1981 accgactcca gcaaaccggg accgtaagta gagtgaagct tataggcgac gtcaacgatg
     2041 tgttttgcaa cttcgttctc ggtcattggg gaggtatttt cacgcaaagg cgcaaagacg
     2101 caaaggaacg caaagaaaaa gagccggacc aaacgcagtt tagaattcgg gaggaagttt
     2161 gcaggctcag ataagccatt tgctcagccg ttcttctgcg tcgtcctgtg gaatgccccc
     2221 ttcagtgtct gcggatttca atccgttccg cgccttttcg aggacgtaga ggtggtattg
     2281 aatgtcttca agtgagcaat cgttcggcaa cttgccaagt aaccgctcaa cctcttcttt
     2341 tgcggtagcc atggatggat tataccggaa gtcgcgggca gcgcattaaa accccaacgg
     2401 ctgcaaaggc cttggctgtg tgccttcaaa gaaccagctc gcgccgacct ttagccggtg
     2461 gtgccatgta ggcaagcgcg cggtgtacat cgcaaagcgt gcctggcggg cgagtggtcc
     2521 ggccatgact ttgccggctg agaggaccgc ggcgtgctcc gtgcccaggc taagcgcttc
     2581 gcccagctca acgaagtgtt tcgtcttgag ctcgtcgccg gtcaaagaag cgcgcacgtt
     2641 gcgcgcgcac aggtgcgcct gctgcagtgc gagctgcgct gttccggcca gcgtcggtgg
     2701 gacgtccggg taagaagcaa tgtcgccaag ggtgaaaaca tttggatgat tgcgaacttg
     2761 cagggtcggt tcgacgatta tcagtccgcg cttgtccttc tcgactttga ggttctcaat
     2821 gagcgggttc atccgcacac ctgccaccca aacgacgcct gcaacttcga tatcactctc
     2881 gcgtccgttg tgttccaggg tcaggacatt cgccgcgacg tgcgcgacgc gtgtctgtgt
     2941 gtgaatctca atacgctgtt ctgccaactc gcgctcaaca tgttcgcgaa tctcgacgcc
     3001 catgcccggc acgagtcggt cggccatttc gatgattagg acgcgcggct caccgcgtag
     3061 cgcgcggcgc ttcacggcat cgcgcagcag atcggacatc ttggtcgcca gctcaacgcc
     3121 actcgcgcct ccgcccacga cagcgaatgt cagcgctgcc cgggtgtcct gcggagcggc
     3181 gtccggctga atgccatcaa gggcttcggt caagcgtcgc cgcaagtgat tcgcgtcggc
     3241 gattgtccga aaaggaaggc tgaattgttc ggcgcctttg actccccagt aatttgtcgt
     3301 agcgccaagt gcgagcacca gcgcatcgca agtcagcggc gcggcgcggc cttcaattgt
     3361 tactgcgcgg ttgtccaggt cgatcgacgt aacggccccg cggacaacct tcacatcatc
     3421 cagcagctcg gaataattcg gcgcaatgtg ccaggcttcg acttcgccgc tcaagtactc
     3481 gtaaagcatc ggcttgaagg tgaaatggtc ttcatcgcta acgagcatga tttctccggc
     3541 gccggcgaga tcaagcaccg taaacaaacc accgaagccg ccgccgagga ttaggatttt
     3601 cgcgtctttg ttagccattt atcgctattc aactgtccgg caaaacgagt cggtgatgtt
     3661 aacagacatg cctcgcaggg cacagtaggc ggcctggacg gtcaaactgc ccgtggctgg
     3721 acactcagcc agccggatgt taacttctct gcgatattga attctttgcg gttttgccga
     3781 tcaattggca ttactgcggt ttaggaggcc atcttagcag tggcattagc aaaaga
//
LOCUS       DATDBY010000072         3637 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2353378, whole genome shotgun sequence.
ACCESSION   DATDBY010000072 DATDBY010000000
VERSION     DATDBY010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3637
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2353378"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VIT19_01405"
     CDS             <1..473
                     /locus_tag="VIT19_01405"
                     /inference="COORDINATES: protein motif:HMM:NF015963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003885 - D-arabinono-1,4-lactone oxidase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="D-arabinono-1,4-lactone oxidase"
                     /protein_id="HEY5837659.1"
                     /translation="VLESNEAFNRSIYHLHQELEFTVPYADTWAECDRFLQLFETMYQ
                     NSNDLPYSLLEVRFTPANHDITLIGAGRDRRSCWIDLICNDSRGFEAYYAAAEVEIKN
                     IGARPHLGKFCATLTKSDMQDLHGVHFDKFLQLMAQYDPQDKFANVFTRRLFRT"
     gene            733..1437
                     /locus_tag="VIT19_01410"
     CDS             733..1437
                     /locus_tag="VIT19_01410"
                     /inference="COORDINATES: protein motif:HMM:NF016300.4"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEY5837660.1"
                     /translation="MKSIVTTFLTVTCLSLLFATACAKKPNRTTKVTVAGEAMTKVEP
                     DAAVLIVSVVTQNSQAIVAQQENARKSDAVANAIKATAGADAEIKTSDYTLQPQYDYR
                     DNQLPKIIGYDARNSVIVTMKDLKNVGAVIDAASGAGANSVDNVSFILRQTSPARGQA
                     LADATQQALNKAQSIAQALGGRVARVVEESETSTVAGSQIQENMSYDARRGVTPITAG
                     HLNIKSNVQLIVEIES"
     gene            complement(1434..1715)
                     /locus_tag="VIT19_01415"
     CDS             complement(1434..1715)
                     /locus_tag="VIT19_01415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837661.1"
                     /translation="MDDEQRTLHSTPNAEDDVTPTELAHSIIESLLDHTAVVSDLIAL
                     MAQALDQDTTKALTLTPQWQAYLESRRQMERTREEVAKFAELVTKPDSD"
     gene            complement(1851..2873)
                     /locus_tag="VIT19_01420"
     CDS             complement(1851..2873)
                     /locus_tag="VIT19_01420"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HEY5837662.1"
                     /translation="MTNPKSPSEYSAVRDGGAGLVDQTSRGRILISGSEAVMFLNGLI
                     TNDMKTLAVNSWMAAAFANVQGRLLAAVRIAHREDGFLIDTESATRETVITLLDRFTL
                     AGDFRLQDLTDETAMFSVQGRRASEIISRVVGAEAASVERQKIVNAQFGDATVNVMRA
                     THTAEDGFDLFIEANNSSKLGDAFLASGAAPISQATFETLRIEAGVPLYGIDMDENNV
                     VTETNLDDAVSFTKGCYLGQEIIVRIKHRGHVAKKLSGVVLDDSTPVPRNSKIISSEG
                     KEIGRVTSSTFSPRLGRAIALGYLKYDYLAAGTEVKVAAPESETNATVADLPLVRGSW
                     YAIEAP"
     gene            complement(3040..>3637)
                     /locus_tag="VIT19_01425"
     CDS             complement(3040..>3637)
                     /locus_tag="VIT19_01425"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: protein motif:HMM:NF015146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEY5837663.1"
                     /translation="VAEAANCTRCPAMCGRAAVLSELNGPVDARVMFIGEAPGRKGAD
                     QTRVPFSGDQSGKNFEGFLAAASLQRSEIFITSAALCNPRGASGANRRPTTQELRNCS
                     VFLRRTIELVNPEIIVTLGGVALEALKRLHDHPFTLRDDGAKVRQWNSRTLVPLYHPS
                     PQVLITSRDANAQMRDYRVVKKAIGLAVRSAAATPEVR"
BASE COUNT          818 a         1068 c          962 g          789 t
ORIGIN      
        1 tcgtgctcga aagtaacgag gcattcaacc gctcgatcta tcacctgcac caggagctgg
       61 agttcacggt tccatacgcc gacacatggg ccgagtgcga ccgctttctt cagctattcg
      121 aaactatgta tcagaattcg aacgacctcc cttatagcct cctggaagtt cgtttcacac
      181 ccgcgaatca cgacatcacc ctgatcggtg ccggacgcga tcggcgctcg tgttggatcg
      241 acctgatctg caacgactcg cgcggtttcg aggcctacta cgccgccgca gaagtcgaga
      301 tcaaaaacat cggcgcccga ccgcatctcg gcaagttctg cgcgacgctt acaaagagcg
      361 acatgcaaga cctccacggc gtccacttcg acaaattcct gcagctcatg gcgcagtacg
      421 acccgcagga taaatttgcg aacgtgttta cgcgcaggtt gtttagaacg taaattggcg
      481 attcttcttt cgtgtctctt cggtcggttt cgggtttcct cttaaaagcc aaatcgcgaa
      541 atcatagaga ttctattcaa aagttaaacc ccatagatgg cgccacccgt atttacggcg
      601 agatcgcctg aaaactcggc ccttaatctc tgcaagtcca gccttccccc tcgttccaat
      661 ttcaggaact caaatacatc tgctgtgtct aaacagcagc ccaaacccaa aaactgagga
      721 ggaacgaaac cgatgaaatc cattgtgacc acgtttttga ccgtcacatg tctatccctg
      781 ctgtttgcga ccgcctgcgc gaagaaacca aatcgcacaa ccaaagtcac cgttgcgggt
      841 gaagcaatga ccaaagtcga gcccgatgcg gccgtgctta tcgtgtctgt ggtcacgcaa
      901 aactcgcagg ccatcgttgc gcaacaagaa aatgcgcgga agagcgatgc cgtcgcgaat
      961 gccatcaaag ctacggccgg agcagatgcc gagatcaaaa caagcgacta tacgctgcag
     1021 ccgcagtacg actatcgcga caaccaactg ccgaagatca tcggctatga cgcgcgcaat
     1081 agcgtgattg tgacaatgaa agacttgaaa aacgtaggtg cggtgatcga tgcagcgtcg
     1141 ggcgcgggtg caaacagcgt cgacaacgtg tcattcatat tgcgccaaac cagtccggcg
     1201 cgcgggcagg ctttggccga cgcaacgcag caagcgttga acaaagcgca gtcgattgca
     1261 caggcgctgg gcggccgtgt tgctcgggtc gtcgaggaaa gcgagacatc gaccgtcgcc
     1321 gggagccaga ttcaggaaaa catgagttac gacgccagaa gaggtgtgac tccgatcacg
     1381 gcaggccatt tgaatatcaa atcaaacgtg caactgatcg tcgaaattga aagctaatct
     1441 gagtcaggct tggtaacgag ctccgcgaac ttcgcgactt cttcgcgggt gcgttccatc
     1501 tgccggcggc tctcaagata agcctgccac tgcggcgtca gagtgagtgc tttggtcgta
     1561 tcctgatcga gcgcctgcgc catcaaagcg atcaaatcgc tgacgaccgc tgtgtgatcg
     1621 agcagcgatt cgatgattga atgcgcgagc tcagtcggcg tgacatcgtc ttcggcgttg
     1681 ggtgtggaat gtaaggttcg ttgttcgtcg tccatggcta gtcagctact tcgccgagat
     1741 tacaatcggc gtcccgtagg gacgaaatgt ttagagaacc agtgcggctt gaatcttgga
     1801 gctccgtagc cgcgaaatgt taacccgact tcccgagtga tatcgcgctc ctacggagct
     1861 tctatcgcgt accaactccc gcgcaccaat ggtaagtctg cgacggtggc attggtttcg
     1921 ctttcgggcg ccgcaacctt cacttcagtt cccgccgcca aataatcgta tttgagatag
     1981 cccagcgcaa ttgcgcggcc cagccgcggc gaaaacgttg atgacgtcac gcgcccaatc
     2041 tctttaccct cgctcgaaat gatttttgag ttgcgcggaa ctggagtcga gtcgtccagc
     2101 accactccgc tcagcttctt cgcgacatgg ccgcgatgtt tgatgcggac gattatctcc
     2161 tggccgaggt agcagccttt cgtgaagctg acggcatcgt ccagattcgt ttccgtcacg
     2221 acattgttct catccatgtc gatgccgtaa agcggaacgc cggcttcgat gcgtagcgtt
     2281 tcgaacgtgg cctgcgagat tggcgccgcg ccactcgcca aaaacgcgtc acccaatttc
     2341 gagctgttgt tcgcctcaat gaaaaggtcg aagccgtctt cggcggtgtg cgtcgcacgc
     2401 atgacgttca cggtcgcgtc cccaaactgc gcattcacta ttttttgccg ctccacgctc
     2461 gcggcttccg caccgaccac gcgggaaatg atctcggatg cccttctccc ctgcaccgaa
     2521 aacatcgccg tctcgtcagt taagtcctgc aagcgaaaat cgccggcgag cgtgaatcga
     2581 tccagcagcg tgatgaccgt ctcacgcgtc gcgctttcgg tgtctatcag aaagccgtct
     2641 tcgcgatgcg cgatgcggac tgccgcgagc agacggcctt gcacattagc gaacgccgcc
     2701 gccatccacg aattcaccgc gagcgtcttc atgtcatttg tgatcaggcc gttgagaaac
     2761 atcacagctt cggacccgct tattaggatg cggccgcgcg aagtttgatc aaccaggccg
     2821 gcaccgccat cgcgcacggc tgagtattca gaaggtgatt ttggattcgt catcggacac
     2881 tgtgatagcg ggctttcgct ccgttaggag cgagatgttt atagcactta cgagctttga
     2941 gctgacacta gctcctttag gagcgacaat agattcgagc tgccaactat aaacattctg
     3001 cccctacggg gcttataaga attccgcgcc tgactgtcct taacgcacct caggcgtcgc
     3061 agcggcggaa cgtacagcca agccaattgc tttcttcact actctgtaat cgcgcatctg
     3121 cgcgttcgcg tcacggctcg tgatcaaaac ttgcgggctc gggtggtaaa gcggaaccaa
     3181 cgttcggcta ttccactgcc gcaccttcgc gccatcgtca cgcaatgtga atggatgatc
     3241 gtgcagacgc ttcagcgcct caagcgcgac tccgccgagt gtcacgatta tttccggatt
     3301 aaccagttca atagtgcgcc ggagaaaaac agaacagttc cgcaactctt gcgttgtcgg
     3361 ccggcggttc gcgcctgacg cgccgcgcgg attacacagc gcggcgctgg tgatgaatat
     3421 ctctgatcgc tgcaagctcg ctgctgcaag aaaaccttcg aagttctttc ccgattgatc
     3481 gcccgagaat ggaacccgcg tttggtccgc gcctttgcgt cccggagctt caccgataaa
     3541 catcacgcgc gcgtcaaccg ggccgttgag ttcgctcaaa acggcagcac gtccgcacat
     3601 cgccggacag cgagtacagt tcgccgcctc tgccacc
//
LOCUS       DATDBY010000073         2305 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1969929, whole genome shotgun sequence.
ACCESSION   DATDBY010000073 DATDBY010000000
VERSION     DATDBY010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1969929"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            50..>2305
                     /locus_tag="VIT19_01430"
     CDS             50..>2305
                     /locus_tag="VIT19_01430"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HEY5837664.1"
                     /translation="MKLGPARAAVVASSDRIELKDFIAEALDGRASGNVTIALTKTGT
                     SRVSTDFNNFDLAAVLALLSGRAVPVSSRATGRAELTFTGKDLATATGNVNAQLQAAP
                     SAADLAPLSGDVAVTANRGVFQIQRANLQTTATRLNASGQFSIEEPISNLRVDVASTD
                     ASEIQRLLITSGALPEVEQQFQTYGIDLAGKLNFNGNLAGALKDPLVTGHAELGSLIV
                     NGRDLGSLNADIATTATETRVNNGRLIQPNGGGAQFALVIPRVGESNTSIDATLDRMN
                     TANLIAALPMTGGTREQFGSTEGEASGSVKISGIPNKMTGVADLRFGKGRLVGEPLQS
                     LTARATFAGSTVNIESIDAAFDAGHIVGSGKYDTETKAFDVKFNGDRVQIERLAALAS
                     RPGMPKFGGTAKLTATATGIFTDITSYQINFNADSTDVTIDGRPAGALKLAGVTENKQ
                     LNVTFSTTGLLGDQPQTVTARVDLSNEKLPAVVESNITGADLTHLLKILLPETQVPVT
                     GRASGSLKLSGNLVDDDNNFDWRGLTGSATFTELTVSVADIQLAPTGPLVIDFAGNEI
                     TFRETRFTGPGTNVTVAGTVATGAGGRQNLAINGDVNLRVFSGLSPDVFSSGVARLFL
                     RITGSYEDPRFLGTAEVTGASVSVFSGDQTITLSNLTGLIRFNSNQAQIERLTGTLGG
                     GRVTASGGALLAGSARGRFALNLRGENVTLNYPKDFRSTVTADLSLNGDMTNQFIAGY
                     VNVKRTEYTKDI"
BASE COUNT          484 a          698 c          690 g          433 t
ORIGIN      
        1 ttatcgcgcg agcgcggatc tgagtttggg tggcggagtg ctcggcgaaa tgaaacttgg
       61 cccggcgcgc gccgccgtcg tcgcctcgag cgatcggatc gaactgaaag atttcatcgc
      121 ggaagccctc gacggacgcg cgagcggcaa cgttacgatt gcgctgacaa agacaggcac
      181 gtcaagagtc tcgaccgact ttaacaactt cgatctcgca gcggtcctcg ccctcctgtc
      241 cggacgcgcg gtacccgttt ccagccgcgc caccggtcgc gcggagctga ctttcaccgg
      301 caaagatttg gcgaccgcga cgggaaacgt gaacgcgcag ttacaggcgg cgccttccgc
      361 cgccgatctc gcgccgctct cgggcgacgt cgccgtcacc gccaatcgcg gagtctttca
      421 aattcagcgc gcgaacctgc aaacaacggc gaccagactc aacgcttcgg gccaattttc
      481 gattgaagaa ccgatttcga acctgcgcgt cgatgttgct tcaactgatg cgtcagagat
      541 tcaacgcttg ctgattacgt ctggcgcttt gcccgaagtc gaacagcagt ttcagaccta
      601 cggaatcgat ctcgccggga agttgaattt caacggtaat ctggccgggg cgttgaagga
      661 tcccctggtt accggtcacg ccgaactcgg ctcgctgatc gtcaatggcc gcgacctcgg
      721 atcgctaaac gcggacatcg cgaccactgc aactgaaacg cgtgtgaaca acggccgtct
      781 gattcaaccg aacggtggcg gcgcgcagtt cgcgctggtg attccgcgcg tgggcgaaag
      841 caacacgtct atcgacgcca cgttggatcg gatgaacacg gcaaatctga ttgccgcctt
      901 gcccatgacc ggcggcacgc gcgaacaatt cggcagcact gaaggggaag cgtcgggctc
      961 agtaaagatc agcggcattc cgaacaagat gaccggtgtc gccgacctgc gcttcggcaa
     1021 agggcgtctg gttggcgagc cgcttcaaag cctgaccgcg cgcgcgacgt tcgccggttc
     1081 gaccgtgaat atcgagagca ttgacgcggc attcgatgcc gggcacatag tcggcagcgg
     1141 caagtacgac acggaaacca aggcgttcga tgtgaagttc aacggcgatc gcgtgcagat
     1201 cgagcggctg gcggcgctcg cgagccggcc aggcatgccg aagttcggcg gcaccgcaaa
     1261 gctgacggca accgcgacgg gaattttcac ggacatcacg tcgtatcaaa tcaacttcaa
     1321 cgccgacagc accgacgtga cgatcgacgg ccgtcccgcg ggcgcgctga agcttgccgg
     1381 cgtcaccgag aacaaacaac tcaacgtaac tttcagcacg accggattgc ttggcgacca
     1441 gccgcaaacg gtcaccgcgc gcgtcgatct ctcaaatgaa aaacttcccg ccgtcgttga
     1501 gtcgaacatt accggcgccg atctcactca cctgttgaag atccttctgc ctgaaacaca
     1561 ggttcccgtg acgggacgcg cgtcgggcag tttgaaactc tctggcaacc tcgtcgatga
     1621 cgacaataat tttgattggc gcggactcac cggctcagcc acgttcactg aactaaccgt
     1681 cagcgtcgcg gacatccagc tcgcaccgac aggtccgctc gtcatcgatt tcgcggggaa
     1741 tgaaatcacg tttcgcgaga cgcgctttac cggtccggga acgaacgtga cggtggccgg
     1801 aacagtggcg acgggcgcgg gcgggcgaca gaacctggcc atcaacggtg atgtgaattt
     1861 gcgggtgttc agcggcctgt cgcctgacgt tttctcttcg ggagtagcga ggctcttcct
     1921 gcgcatcacc ggcagctatg aggatccgcg ctttctgggt acggccgaag tgaccggcgc
     1981 ttcagtctca gtcttctcgg gtgaccaaac catcactctt tcgaacctga cgggcttgat
     2041 caggttcaat tcgaatcagg cgcagatcga gcggctgacg ggaaccttgg gcggcggccg
     2101 agttactgcg tcgggcggcg cgttgctggc cggctcggcg cgcggacgtt tcgccctgaa
     2161 tctacgcggc gaaaacgtca cgctcaacta tccgaaagat tttcgctcga cagtcaccgc
     2221 tgatctttct ttgaacggag acatgaccaa tcagttcatc gccggctatg tgaacgtgaa
     2281 gcggactgag tacacgaagg acatc
//
LOCUS       DATDBY010000074         9784 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_748960, whole genome shotgun sequence.
ACCESSION   DATDBY010000074 DATDBY010000000
VERSION     DATDBY010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 9784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9784
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_748960"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..545
                     /locus_tag="VIT19_01435"
     CDS             <1..545
                     /locus_tag="VIT19_01435"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEY5837665.1"
                     /translation="NIRLLAATNRDLEDLIKTGGFRQDLYFRLNVVKLTMPPLRERRD
                     DIPLLANYFARKYAEKCNRRVMGMSSEARKRLMTYDWPGNVRELENAIERAVVLGTTE
                     QILADDLPEAVVEADATVSSEEASSYHEQVVQTKKRMITDAMKQANGNYTAAAKLLNL
                     HPNYLHRLIRNLNMKDELKT"
     gene            832..3264
                     /gene="lon"
                     /locus_tag="VIT19_01440"
     CDS             832..3264
                     /gene="lon"
                     /locus_tag="VIT19_01440"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: protein motif:HMM:NF008053.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEY5837666.1"
                     /translation="MEEYSDRTPADIARYPMVPIRDVVIFPFTKVAFKIGRPGSVRAL
                     EMALASDRTIFLSTQHDATVDEPSPEQIYRVGTIARILQSQKQENGQIKVVVEGRERA
                     TTIRVENNDGAFTALVRRAPVVSEEGVRTDALVQKVAQLIEQHLRLAPDIQPDALQTA
                     MRNADASHMADALASQLRISVEDKQGLLELFSTHARLARLIEILEMELEKRQLDRTIQ
                     TRVKRQMEKAQKEYYLNEQIKAIHKELGRKDERAELDELKKKIEEAGMTEEAKEKALQ
                     ELHRLEAMPPMSAEGTVSRTYIDWLVSVPWKQKSKEIRDLSKAEEVLNEDHYGLEKIK
                     DRILEYLAVRQLVKNPKGSILCFVGPPGVGKTSLGKSIARATGRKFVRLSLGGVRDEA
                     EIRGHRRTYIGALPGQIIQMMKKAGAVNPVLLLDEVDKLGTDFRGDPSAALLEVLDPE
                     QNHMFQDHYLDVEYDLSKVFFIATANVLHTIPPALQDRLEVLRLSGYTEREKLEIAKR
                     HLVPKQAEGNGLRNEQFEFSDDGILELIRHYTREAGVRSLEREIGSCCRKVARKFVAE
                     TVSADFKHEIGPEQVREMLGPIKFRQQGVAAESEIGLATGLAWTEVGGEVLQIEATLV
                     KGRGKVTLTGKLGEVMQESAQAALTCIKSRAERLGVSLDFIRKRDLHIHIPEGAIPKD
                     GPSAGITMAVAMCSALMRVPINKNVAMTGEITLRGRILPIGGVKEKLLAAHRFGIDTI
                     ILPKDNEKDLPEVPEEIRSGLTINLVETIDEVIALALQEQASPVEIGDEAKTPPIWTT
                     EPPPSLQTPAEQ"
     gene            3424..3873
                     /locus_tag="VIT19_01445"
     CDS             3424..3873
                     /locus_tag="VIT19_01445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837667.1"
                     /translation="MGKHEDADLILKLYDLRREPVMREARNWMFTFNPTSVQDVMETM
                     IGEHSGHLRMVISYWDMACAMVTSGAIDEELFNKTNGEHIFVYMKIQPVIEGLRAMFD
                     NQEFLKNLETVVKRIPDIETKLPAMRERMSKFAAMRAEQMKAQAATV"
     gene            3899..4477
                     /gene="yihA"
                     /locus_tag="VIT19_01450"
     CDS             3899..4477
                     /gene="yihA"
                     /locus_tag="VIT19_01450"
                     /inference="COORDINATES: protein motif:HMM:TIGR03598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HEY5837668.1"
                     /translation="MRITSATFEKSAFTEPDWPRDKRPEIAFLGRSNVGKSSLMNSLL
                     GVRGLARTSRTPGRTQAVNFFLINEKFRFVDLPGYGYARAPKSVKDQWNAAATDYLAQ
                     REQLVLSVHLIDARHEPTAHDLQLDEWLKHHGKPHVIVATKSDKLSNNELTRTLRRAK
                     EILGTPEILTYSSVTGRGRDDIWRAIDNALKR"
     gene            4826..6187
                     /gene="rho"
                     /locus_tag="VIT19_01455"
     CDS             4826..6187
                     /gene="rho"
                     /locus_tag="VIT19_01455"
                     /inference="COORDINATES: protein motif:HMM:TIGR00767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEY5837669.1"
                     /translation="MANRRRSTTNGGDNGGGVATVEANEEEYVPSKDGHPDVFNLSDL
                     KEMSISKLTQVAKGMDVPGATGMRKQELIFKVLAAQTEKSGLIFSEGVLETLPDGFGF
                     LRAPEYNYLPGPDDIYVSPSQIRKFDLRTGDTISGQIRPPKEGERYFALIKVEAINFE
                     SPDMAREKVFFDNLTPLYPDEMLKMEVAPDNLSARVIDLVTPIGKGQRALVVSPPRTG
                     KTMLLQTIANSIAQNHPEVTLIVLLIDERPEEVTDMQRSVQGEVISSTFDEPPTRHVQ
                     VADMVIEKAKRLVEHKRDVVILLDSITRLARAHNAVVPPSGKILSGGIDSNALQRPKR
                     FFGAARNIEEGGSLTIIATALIDTGSRMDDVIFEEFKGTGNSEIHLDRRLSDKRLFPA
                     IDLQRSGTRKEELLLPKEDLARIWVMRRVLNPLSPTEQMEVVLERIEKTKSNAEFLAS
                     MQQ"
     gene            6267..7685
                     /locus_tag="VIT19_01460"
     CDS             6267..7685
                     /locus_tag="VIT19_01460"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:TIGR02095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA];
                     GO_function: GO:0009011 - starch synthase activity
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase"
                     /protein_id="HEY5837670.1"
                     /translation="MRVAILSSEALPFAKTGGLADVSGALTKALHAEAVDSLLILPLY
                     DQVDRNLLTGTYTEDLEVPWRGRRPRVPVRISDALGAPTYLIESPHYFSRKSIYGDTD
                     DFERFAFYCRAAIALLQRIGDKPDIVHLNDWPCGFASVEVRARRRHEPFFEATRVLFS
                     IHNLAYQGAFDPENLWWMDFAAYRDAFMLDGAAAALKAGIVAADGLSTVSPTYAREIQ
                     TPEQGYGLDWLMRARSDRLAGITNGVDYDVWNPETDPHIAKNFSADDLSGKRACKLDL
                     LRRFKLPAEPDRPIIAIISRLVGQKGYDLIRQAAGAIVDTGAFFIALGAGAREYEDFL
                     QSWHDAAPHRVGVYKGYAGEPLAHQIEAGADMFLMPSLYEPCGLNQMYSMRYGTVPIV
                     RATGGLDDTVWNFDATNGTGNGFKFGPYNAAAMLDKIREGLYFYNNSEAWAKIQRNGM
                     VADNSWSAAAKKYIQLYESMLN"
     gene            7744..8088
                     /gene="trxA"
                     /locus_tag="VIT19_01465"
     CDS             7744..8088
                     /gene="trxA"
                     /locus_tag="VIT19_01465"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEY5837671.1"
                     /translation="MSEHVTEVSDSSFEADVLKHEQPVLVDFWAAWCAPCRMLAPTVE
                     AVAHKYAATARVVKLNVDDNPSVSQRYGIKGIPTLILFKNGREEERVVGATSEAAISR
                     MLDKHVSTAATA"
     gene            8211..9521
                     /locus_tag="VIT19_01470"
     CDS             8211..9521
                     /locus_tag="VIT19_01470"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: protein motif:HMM:NF002223.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEY5837672.1"
                     /translation="MVIAVIGAQWGDEGKGKIVDLLAERFDIVVRFQGGHNAGHSVQV
                     GNQSFVLHLLPSGIVHEGKTCVLGNGMVIDPKAFFEEADRLAVQGIHITPERVKVSSR
                     AHLILPYHRALDHTSEERLGNEKVGTTLRGIGPAYEDKAGRRGIRVADALVPEVLRSR
                     IERNLEDANRIIEAYGGEPLDADTIIMETSFLVERLAPFIADTSHFLNQAAASRRTIL
                     LEGAQATLLDVDHGTYPFVTSSSTTVGGACVGTGLAPKHITGVLGIVRTYTTRVGEGP
                     FPTEMLEGEEEIGQLIRERGHEYGASTGRPRRCGWFDAFATRYAAEINGFSSVALTKL
                     DVLDALDEIKVCVGYEMNGKRVDSLPSVSHEMRRVVPVYETLPGWKSPTVGVTDLSDL
                     PRAAREYVNFLSNQIGVQIGLISTGPERSQTIVVRESLLAEWLR"
     gene            9688..9763
                     /locus_tag="VIT19_01475"
     tRNA            9688..9763
                     /locus_tag="VIT19_01475"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9721..9723,aa:Lys,seq:ttt)
BASE COUNT         2272 a         2746 c         2757 g         2009 t
ORIGIN      
        1 tcaacattag attgctggcg gcgaccaatc gcgatctcga agacctgatc aagacaggcg
       61 gcttccggca ggatttgtac ttccgcctca acgtagtgaa gttaactatg ccgccattgc
      121 gcgagcgccg cgatgacatt ccgctactcg caaattattt cgcgcgaaaa tacgccgaaa
      181 agtgcaaccg ccgggtgatg gggatgtctt cggaggcgcg gaagcgtttg atgacttacg
      241 actggcccgg caacgttcgt gaattggaaa acgcgattga gcgggcggtg gtacttggca
      301 ccactgagca aattctggct gacgatcttc ccgaagcggt ggtcgaggcg gatgcgacgg
      361 tttccagcga agaggcttcc agctaccacg agcaggtcgt gcagactaag aagcgaatga
      421 ttaccgatgc catgaaacag gcaaacggga attacacggc ggcggcaaag ctgctcaacc
      481 tacatcccaa ttacctgcac cggctgattc gaaatctcaa catgaaagac gaactgaaaa
      541 cttagtcagc gtttcgacta cttctttggc tttgtcacgt tacccggtga atttgaatgc
      601 ctaatcgcgg aaatttcgaa tcctcgactt gagattcgtg gtagcgcgac gatggaatat
      661 cgtttacaat caacgctggt taacagaagc gcgaggcgac aaaggtgact ggcctttttc
      721 gcagccggag cggcccgcga tgaaattgaa agttatggcc gtattcgtcg tttaactgac
      781 tgttccgccc caatctccag gagtttctcg ttcattctgc agtaagcaat catggaagaa
      841 tattcggacc gaacccccgc tgacatcgcg cgctatccga tggtgccgat tcgcgacgtc
      901 gtaattttcc cgttcaccaa ggtcgcattc aaaatcggca gacccggctc ggtgcgggcg
      961 ctggaaatgg cgctggcatc agaccgcacg atttttcttt cgactcagca cgacgcaacg
     1021 gtcgatgaac cgtcgcccga acagatttat cgagtcggca cgatcgcgcg gattctgcag
     1081 tcgcaaaagc aggaaaacgg ccaaatcaag gtcgtcgtcg aaggccgcga acgcgccacg
     1141 acgattcgcg tcgagaacaa tgacggtgcg ttcactgcgc tcgtgcgtcg cgcgcccgtc
     1201 gtcagtgaag aaggcgtgcg gaccgacgct ctggtgcaaa aggtcgcgca actaattgag
     1261 cagcatctgc ggctcgctcc cgacattcaa cctgatgcgc tgcaaaccgc gatgcgcaac
     1321 gccgacgctt cccacatggc ggacgcgctg gcttcgcagc tgcgaatctc agttgaagac
     1381 aagcagggac tgttggagct tttctcgacg cacgcacggc tggcgcgttt gattgagatt
     1441 ctcgaaatgg agctcgagaa acggcagctc gaccgcacga tccagacgcg cgtaaagcgt
     1501 cagatggaga aggcacagaa agagtactac ctcaacgagc aaatcaaagc gattcacaaa
     1561 gaactgggtc gcaaagatga gcgcgctgag ctcgacgagc tgaagaaaaa gatcgaagaa
     1621 gccggcatga ccgaggaagc gaaagagaaa gcgcttcagg aattgcaccg gctcgaagcc
     1681 atgccgccga tgtccgctga aggcaccgtg tcgcggacct acatcgattg gcttgtgagc
     1741 gtgccctgga agcaaaagtc gaaagagatt agggatctca gcaaagccga agaggttctg
     1801 aacgaagatc actacggcct cgagaagatt aaggatcgca ttctcgaata cctggccgtc
     1861 cgccagttgg taaagaatcc aaaaggttca attctctgct ttgtgggacc tccgggcgta
     1921 ggcaaaacaa gcctcggcaa atcgatcgcc cgcgccaccg gtcgcaaatt cgtgcgactc
     1981 agcctgggcg gcgtgcgaga tgaagctgaa atccgcggtc atcggcgcac gtacatcggc
     2041 gctttgcccg gccaaatcat tcagatgatg aagaaagccg gcgcagtgaa tcccgtcctg
     2101 ctgcttgatg aagtggacaa gctcggcacg gatttccgcg gcgatccgag cgcggccctg
     2161 ctcgaagttc tcgatccgga acagaatcac atgttccagg atcactatct cgacgttgag
     2221 tacgatcttt ccaaggtctt ctttattgcc accgcgaacg tgctgcacac gataccgccg
     2281 gcgctccagg atcgtttgga agtgctgcgg ctgtccggct acacagagcg cgagaaactc
     2341 gaaatcgcga agcgacacct ggtgccgaaa caggccgaag ggaacggcct tcggaatgaa
     2401 caattcgagt tttccgacga tggcatcctg gaacttattc gtcactacac gcgcgaagcc
     2461 ggcgtacgga gccttgagcg cgaaattgga tcgtgttgcc gcaaggtcgc ccgcaaattc
     2521 gtcgctgaaa ctgtctcggc ggatttcaaa catgaaatcg ggcctgaaca agtccgcgag
     2581 atgctcggtc cgatcaaatt ccgtcaacag ggcgtcgcag ctgaaagcga gattgggctc
     2641 gcaaccggat tggcgtggac agaagtcggc ggcgaggtgc tgcaaattga agcgactttg
     2701 gtcaaaggcc gcggcaaggt aacgctgacc ggcaaacttg gcgaagtcat gcaggagtcg
     2761 gcccaggctg cgctcacgtg catcaagtct cgcgcagaac gcctcggcgt cagtttggat
     2821 ttcattcgca agcgcgacct gcacattcac attcccgaag gcgcgattcc aaaggacgga
     2881 ccgtcagccg gcatcacgat ggcggtggcg atgtgttccg ccctgatgcg cgtgccgatc
     2941 aacaagaacg ttgcgatgac tggcgagatc actttgcgtg gccgaatact gccgattggc
     3001 ggcgtgaaag agaagctgct ggcagcgcac cggttcggca tcgataccat catcctgcca
     3061 aaggacaacg aaaaagattt gccggaggtg ccggaggaaa tccgcagcgg attgacgata
     3121 aatctcgtcg aaacgatcga tgaagtcatt gcgctcgcgc tccaggagca ggcgagtccg
     3181 gttgagatcg gcgacgaagc aaagactccg ccgatctgga cgactgagcc gccgccaagc
     3241 ctgcagacac ctgcggagca atagctcgat caaatcaact gttagagtac cgactttagt
     3301 cgggtattgc tcccgtgcaa tgctcaacta aagttggtac tctaacgcat tcaatcaacg
     3361 atcaaccgcc cgctattccg acacgtcggg attctggctt aatcaaaaaa caggagcata
     3421 actatgggta aacacgaaga tgcagatctt attctgaaac tttacgacct ccggcgcgag
     3481 cccgtcatgc gcgaagcccg caactggatg ttcactttca accccaccag cgtccaggac
     3541 gtcatggaga cgatgattgg cgaacacagc ggccacctcc gtatggtcat ttcctactgg
     3601 gacatggcgt gcgcaatggt caccagcggc gcgattgacg aggaactatt caacaaaacg
     3661 aacggcgagc atattttcgt ttacatgaaa atccaaccgg tcatcgaagg cctccgggcg
     3721 atgttcgaca accaggagtt tctcaagaac ctggaaacgg tcgtcaaacg catccccgac
     3781 atcgagacga agctgccggc gatgcgcgag cggatgtcaa agttcgccgc gatgcgcgcg
     3841 gagcaaatga aggcgcaagc cgcaactgtg taatcacgct gtgcgtgcca atctttgaat
     3901 gcgaatcacc agcgcgacgt ttgaaaagag cgcattcacg gaacccgatt ggccgcgtga
     3961 taaaaggcct gagatcgcct tcctcggacg ctcgaatgtg ggaaagtcga gcttaatgaa
     4021 ttccctgctc ggcgtccgag gcctggcgcg cacctcccga acacctggtc gcacccaggc
     4081 ggtgaacttc tttttgataa acgagaagtt tcggttcgtg gatcttccgg gttacggtta
     4141 cgcgcgtgcg ccgaagagcg tgaaagacca atggaacgcg gccgcgacgg attacctggc
     4201 gcagcgcgaa caactggttc tttcggtgca cctgattgat gcgaggcacg agccgactgc
     4261 acacgatcta caactggacg aatggctgaa gcatcacggg aaaccgcacg taatcgttgc
     4321 caccaaatcc gataagctgt ctaacaatga acttacccgc acccttcgtc gggccaagga
     4381 gattttgggg acgcctgaaa tcttgactta ctcgagcgtg acgggccgcg gacgcgacga
     4441 tatctggcgc gcgatcgaca atgccctgaa acgctaatcg cttctgccga agccgttcac
     4501 agttgtgtta acagttagca cttgcgattt ttgagctttt gtttagaata ggatttccaa
     4561 actgaatcag gctcacaaga cattctgagg ttctgatctg agaccacgcg gatcctgcca
     4621 gcggcatcca aatcacgatt taattaacaa atcctggatt ccgaggcagc agttggcata
     4681 aaccgttttt tgcggtggaa gcccccactt gagcttccgc gatcgcgctt tccctttttg
     4741 acgggcatcg ctcaaaccaa ttttgacagc atgctgaaat ctcaaacgac ctggtagccc
     4801 cgcggctgcc cacgaaagaa ctgatatggc aaatagaaga agatccacta cgaatggcgg
     4861 cgacaacggc ggcggtgtgg ccaccgttga ggcaaacgag gaagagtacg tgccgagtaa
     4921 agacggtcat ccagatgtat ttaatctgtc tgacctgaag gagatgtcca tttccaagct
     4981 gacccaggtc gccaagggca tggacgttcc cggcgctacg ggcatgcgca agcaggagct
     5041 gattttcaaa gtcctggccg cgcagaccga gaagagtgga ttgatctttt cggaaggcgt
     5101 gctggaaaca cttcccgacg gcttcgggtt cctgcgggca ccggaataca actacctgcc
     5161 ggggccggat gacatctacg tctctccctc gcaaattcgc aagttcgact tgcgcaccgg
     5221 cgacaccatc agcggtcaga ttcgtccgcc caaggaaggc gaacgctact tcgcgctaat
     5281 caaagttgaa gcgatcaact ttgaatcgcc tgacatggcg cgcgaaaaag tcttcttcga
     5341 caacctgacg ccgctttatc cggacgaaat gctgaaaatg gaagttgctc cggacaacct
     5401 ctcggcgcgg gtcatcgacc tcgtgacgcc gatcggcaaa ggccagcgcg ccctcgtcgt
     5461 ttccccgccc cgcaccggta aaacgatgct gctgcaaacg attgcgaact caatcgcgca
     5521 gaaccatccg gaagttactc tgatcgtttt gctgattgat gagcggccgg aagaagtcac
     5581 cgacatgcaa cgctcagttc agggcgaagt tatctcatcg acctttgatg aaccgccgac
     5641 gcgccacgtg caggtcgccg acatggtgat cgagaaagcc aaacgcctgg tcgagcacaa
     5701 gcgcgacgtc gtgatcctgc tcgactcaat cacgcgtctg gcccgcgcgc acaacgcagt
     5761 ggttccgccc agtggcaaga tcctctcagg tggtatcgac tcgaacgctt tgcagcgtcc
     5821 gaagcggttc ttcggcgcgg cccgcaacat tgaggaaggc ggctcgctca cgatcattgc
     5881 cacagcgctt atcgataccg gttcgcgcat ggacgacgta atttttgaag agttcaaggg
     5941 caccggcaac tccgaaattc atcttgaccg gcgtttgagc gacaagcgtc tgttcccggc
     6001 catcgatctg cagcgttcgg gcacgcgcaa ggaagagctg ctcctcccga aggaagacct
     6061 tgctcgtatc tgggtcatgc gtcgcgtgct gaatccctta tcgccgaccg agcagatgga
     6121 agtcgtgctc gagcgaatcg aaaagaccaa gagcaacgca gagttcctgg cttcaatgca
     6181 gcagtagaaa gcggtgacgg gtgtcgggtg acaggtgata ggttataaga atcctgtcac
     6241 ctgtcacctg tcacctgtta cccttaatgc gtgttgcaat cctttcatcc gaagcgcttc
     6301 ctttcgccaa aaccggcggc ctggccgacg tttccggagc tctaactaaa gctcttcacg
     6361 ccgaagctgt tgattcactt ctgattctgc cgctgtacga tcaggttgat cgaaacctgc
     6421 tcaccggaac ttacaccgaa gacctcgaag tgccctggcg cggtcgccgg ccccgcgttc
     6481 cggtacgaat cagcgatgcg ctgggcgcgc cgacttacct catcgagtca ccgcactatt
     6541 tttcgcgcaa atcgatttac ggcgacacag acgatttcga gcgatttgcc ttctactgtc
     6601 gcgcggcgat cgctctgctc caaagaatcg gcgacaaacc cgacatcgtt catctaaatg
     6661 attggccctg cggatttgcg tccgtagaag tgcgcgcgcg gcggcggcac gaaccgttct
     6721 tcgaggccac gcgagttctc ttctcgattc acaacctcgc ataccagggt gcgttcgatc
     6781 ccgagaatct ttggtggatg gatttcgccg cttatcgcga cgccttcatg ctggatggcg
     6841 cagcggcggc cctgaaagcc ggcatcgtcg ccgccgacgg gctgtcaacc gtcagcccaa
     6901 cttatgcgcg cgagattcag acgcccgaac agggctacgg cttggattgg cttatgcggg
     6961 cacgcagcga tcggctcgct gggatcacca acggcgtgga ctacgacgtg tggaatcctg
     7021 agacagatcc gcatatcgcg aagaactttt cggcggacga tctttccggt aagcgcgcgt
     7081 gcaaactgga tttgcttcgt cgcttcaaac tgccggcgga acccgatcgg cccatcatcg
     7141 caatcatctc gcggctggtg ggacaaaaag gctatgacct gattcgccag gcggccggcg
     7201 ccatcgtcga taccggcgct ttcttcatcg cgctcggcgc cggggcccgc gagtatgagg
     7261 actttttgca gagctggcat gatgccgcgc cgcatcgtgt cggcgtttac aaaggttacg
     7321 ccggcgaacc cctggcgcac caaatcgaag ccggcgccga catgttcctg atgccgtcgc
     7381 tgtacgaacc gtgcgggctg aaccaaatgt acagcatgcg ttacggcacg gttcccatcg
     7441 tgcgggcaac gggcggactt gacgataccg tgtggaattt cgacgcaacg aacggcacgg
     7501 gaaatggttt caagttcggt ccgtacaacg cagcggccat gcttgataaa attcgcgaag
     7561 ggctttactt ttataacaac tcggaagcgt gggcgaagat tcaacgtaac ggaatggtcg
     7621 cagacaattc ctggtcggcc gcagccaaga aatatattca gctttacgaa tcgatgctca
     7681 attgatgcgg caaacgagcg ccgattccca cgcaaatcga gaaaacagca aggagcttaa
     7741 gtaatgagtg agcacgtaac agaagttagt gatagcagtt ttgaggcaga cgttttgaaa
     7801 cacgaacagc cggttctggt cgatttctgg gccgcctggt gcgcaccgtg ccgcatgctc
     7861 gcgccgacgg tcgaagccgt cgcccacaaa tacgcagcca ccgcgcgggt ggtgaaactt
     7921 aacgtggacg acaacccttc ggtttcacag cgctacggca tcaagggcat tccgactctg
     7981 attcttttca agaacggccg tgaagaagag cgcgtcgtcg gggcgacctc cgaagccgcc
     8041 atctcgcgca tgctggacaa gcacgtcagc accgctgcca ctgcttaagt tttacgagtg
     8101 tcaggcgcgg ctatgtttgt ttcggagaac agccgcgcct gttttgtgtc cggagtattg
     8161 attcattttt tcattgattc aatggatcaa tgattcaatg agtaattcct atggttatcg
     8221 cagtcatcgg cgcccaatgg ggcgatgaag gtaaaggcaa gatcgtcgat ctgctggccg
     8281 agcgcttcga cattgtcgtc cgcttccagg gcggtcacaa cgccggccac tcagtgcagg
     8341 tcggcaacca gtcgtttgtc cttcatcttc tgccatccgg catcgtgcac gaaggcaaga
     8401 catgcgtgct gggcaacggc atggtgatcg atccgaaagc cttcttcgaa gaagctgacc
     8461 gtctggccgt ccagggcatc cacattacgc ccgagcgggt gaaggtgagt tcacgcgcgc
     8521 acctgattct tccgtaccat cgcgctctgg atcacacgag tgaagagcgg ctcggcaacg
     8581 agaaagtcgg cacaacgctg cgtggcatcg gcccggcgta tgaggataaa gccggtcgcc
     8641 ggggcattcg cgtcgccgac gcactcgtgc cggaagtgct ccgttcacga attgaacgaa
     8701 acctggaaga cgcgaaccga atcatcgaag cctacggcgg cgagcctctc gatgccgaca
     8761 cgattatcat ggagacgtct ttcctcgttg agcgtctcgc gcccttcatc gccgacacgt
     8821 ctcatttcct gaatcaggcc gccgcctcgc gccgcacgat tttgttggaa ggcgcgcagg
     8881 cgactttgct ggacgtggat cacggcacgt atccattcgt cacctcatcg agcaccaccg
     8941 tcggcggcgc ttgtgtcggt acaggtctcg cgccgaaaca catcaccggc gtgcttggca
     9001 tcgtgcgcac ttacacgacg cgcgtcggcg aaggaccctt cccgaccgag atgcttgagg
     9061 gcgaagaaga aatcggccaa ttgattcgcg aacgtgggca tgaatacggc gcatcgacgg
     9121 gccgtccgcg ccgctgtggt tggttcgacg ctttcgccac gcgctatgcc gcggaaatca
     9181 acggcttcag ttccgtggcc ctcactaagc tcgacgtgct cgatgctttg gacgaaatca
     9241 aagtgtgcgt cggctatgaa atgaacggca agagggttga ttcccttcct tctgtctcgc
     9301 acgaaatgcg tcgcgttgtg cccgtttacg aaacgctccc gggctggaag agcccaacgg
     9361 tcggcgtcac agatttgagc gacctcccgc gcgccgcacg cgagtacgtc aacttccttt
     9421 ctaaccaaat cggagtgcag attggtttga tctccaccgg ccccgaacgc tcgcagacga
     9481 ttgtcgtgcg cgagtcgctg ttggccgagt ggcttcgata gaagaacgta ctttgtactt
     9541 tgttcttcgt gctttgtctt cagattaaag tccgctcgcc tgggcaagac ttcgatgtca
     9601 tacatcaaag ttcaaagtac taagtacaaa gaacgtgcgg ttaacttgaa acttgaaacc
     9661 tggaactcta aactgggttt ccttcgtggg ccgatagctc agttggtaga gcaactggct
     9721 tttaaccagt gggtcgcagg ttcgagtcct gctcggctca ccactttaat gaagtagctg
     9781 gaga
//
LOCUS       DATDBY010000075         4738 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_944673, whole genome shotgun sequence.
ACCESSION   DATDBY010000075 DATDBY010000000
VERSION     DATDBY010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4738
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_944673"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..396
                     /locus_tag="VIT19_01480"
     CDS             <1..396
                     /locus_tag="VIT19_01480"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEY5837673.1"
                     /translation="VLLTENLFGDILSDEASVITGSLGMLASATIGGAVDLYEPVHGS
                     APDIAGRGSANPLGAIASVAMLLRYTAKLEHEANDIETAIDEVLHAGYRTIDIARGAG
                     GHVSTAEMGRLVAEAVAGVADMRHAYHAV"
     gene            531..1937
                     /gene="leuC"
                     /locus_tag="VIT19_01485"
     CDS             531..1937
                     /gene="leuC"
                     /locus_tag="VIT19_01485"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF004016.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEY5837674.1"
                     /translation="MPRTLFEKVWDAHVVRATEGEPDLLYIDLHLIHEVTSPQAFDGL
                     RAAGRKVRRPELTVGTIDHNVPTTDRSLPITDAIAVKQIDTLRRNCAEFGVTLFDIDS
                     KEQGIVHVIGPELGLTQPGMTIVCGDSHTSTHGAFGALAFGIGTSEVEHVLATQCLPQ
                     TKPKTMLVQTSGRLPENVTAKDLALGIIGELGTDGASRHVIEYAGEAVRALSMEGRMT
                     LCNMSIEAGARAGMVAPDETTFEYIKGRRFAPPGDEWNKAEIYWRDLPTDEGAAFDRR
                     VEIDATKLAPFVTWGTNPGMVAPITASIPDPSLVRNEADRRAVERALEYMALQPSTKI
                     ADIAIDRVFIGSCTNSRIEDLRAAARVVSGHRVNKAVRAMVVPGSQTVKQAAEEEGLD
                     QIFRDAGFEWRESGCSMCLGMNPDILQPGERCASTSNRNFEGRQGRGGRTHLVSPPMA
                     AAAAIAGHFVDVRSWNYK"
     gene            2014..2625
                     /gene="leuD"
                     /locus_tag="VIT19_01490"
     CDS             2014..2625
                     /gene="leuD"
                     /locus_tag="VIT19_01490"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF002458.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEY5837675.1"
                     /translation="MKPFRSHTGLVAVLDRPNVDTDQIIPKQFLKRVERTGFGQFLFY
                     DWRFLPNEQPNPDFPLNDPRYRAASILIAGKNFGCGSSREHAPWALADYGFRAIIAPS
                     FADIFANNCMKNGLLPVTLTDAEVAELMRRAPETEDYEVTVDLENRIVADTNGFSATF
                     QVGDFQRYCLLEGLDDVGLTLKHVTDIAGYESRRPAWAPRIIS"
     gene            2677..3990
                     /locus_tag="VIT19_01495"
     CDS             2677..3990
                     /locus_tag="VIT19_01495"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5837676.1"
                     /translation="MSESTCRKSTEFLSRVAATLFTPRIITASLILALLASLSPAQTA
                     TPKAPAAGYVLKPARVFDGESAQLRTDWVVLVRGEKIEAVGPASEIKAPSGAKVIELR
                     GMTLMPGLIDAHSHVLLHPYSETSWNDQVARESLSLRVARATNHLRSSLMAGFTTLRD
                     LGTEGAGYADVGLKQAVQQGIIPGPRLIVTTRAIVATNTYGPKGYASEWSVPQGAEEA
                     DGLDNLTRVARDQIGKGADWIKVYADYRWGAGGTAHATFTLDEMKLIVEVAKSGGIPV
                     AAHASSTEGARRAILAGVETIEHGDGLTPELFRMMKERGIAFCPTLSVASAANIENKK
                     RVFKQALESGVAIANGSDVGVFAHGDNAKEMETMVAWGMPLIDALRSATSVAARVLHL
                     EDKIGFVKSGLVADLIAVEGDPTRDISTLRRVRFVMKNGEVYKQP"
     gene            4019..4588
                     /locus_tag="VIT19_01500"
     CDS             4019..4588
                     /locus_tag="VIT19_01500"
                     /inference="COORDINATES: protein motif:HMM:TIGR02999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5837677.1"
                     /translation="MSSTPVTNVTQLLLEWRGGSQQALDALMPVVYDELRRLAQHYMR
                     GERPEHTLQATALVNEAYLRLVDMKVSWQDRAHFFAVAARLMRRMLVDHARTQHRAKR
                     EGGPKVSLDDALEVSCKPASDLLALDEALEQLATFDQRKSEIVELHFFGGLGNDEVAE
                     ALGISRATVQRELRMAKAWLNHELKNSNE"
BASE COUNT         1041 a         1263 c         1448 g          986 t
ORIGIN      
        1 gtattgctga cggaaaactt gttcggcgac attctgtcgg acgaagcgtc cgtgattacg
       61 ggatccctcg ggatgttagc gtcagcgacg atcggtggcg ccgtggattt gtacgagccg
      121 gtgcacggtt cagcgccaga catcgcagga aggggcagcg cgaatccgct gggggcgatc
      181 gcttcggtcg caatgctttt gcgttacacc gcgaagctgg aacacgaagc caacgacatt
      241 gagacggcga tcgatgaagt gctccacgcc ggttatcgaa cgattgacat tgcgcgcggc
      301 gcaggcggtc acgtcagcac cgctgaaatg ggccggctgg tcgccgaggc ggtggccggc
      361 gttgctgaca tgcgacatgc gtatcatgct gtctgaaaaa aagcgtgctt tggacttggt
      421 gttttgtact ttgatgtctg ttccaggttg cgacccctcg atcaaaacag agtccgtgat
      481 taatagatca aagcacaaag tactaagcac taagtacagt tcttaggttt atgcctcgta
      541 cactcttcga aaaagtttgg gacgcgcatg tggttcgcgc aaccgaaggc gagccggatc
      601 ttctctacat tgatcttcac ctcattcacg aagtcacttc cccacaggcg ttcgatggct
      661 tacgcgcagc tggccgaaag gtgcggcgcc ccgaactcac cgtggggacg atcgatcaca
      721 atgtaccgac gaccgatcgt tccctgccga taacggacgc gatcgcggtg aagcagatcg
      781 atactcttcg ccgcaactgt gctgagttcg gcgtcacact ttttgatata gactcaaagg
      841 aacagggcat cgttcacgtt atcgggccgg aactgggttt gactcaaccc ggaatgacga
      901 tcgtctgtgg cgacagtcac accagcacgc acggagcatt tggcgcactg gcgtttggga
      961 ttggcacgag cgaggtcgaa cacgtgctgg cgacacaatg tctgccgcag accaaaccaa
     1021 aaacgatgct ggtgcaaacc agcggccgct tgcccgaaaa cgtcacggct aaagatctgg
     1081 cactgggaat cattggcgaa ttgggaaccg acggcgcgag ccgccatgtg atcgagtatg
     1141 ccggcgaagc cgtgcgcgcg ctttcgatgg aggggcgcat gacgctttgc aacatgagca
     1201 tcgaagcggg tgcgcgcgcg ggaatggtcg ccccggacga gacgacattc gaatacatca
     1261 agggccgccg gtttgcgccg ccgggcgacg agtggaataa agcggagatt tattggcgcg
     1321 atttgccgac tgacgaaggg gctgctttcg atcgccgcgt tgaaatcgac gcgacgaaac
     1381 ttgcgccgtt tgtgacctgg ggaacaaacc ccgggatggt cgcgccgatc actgcgagta
     1441 ttccggatcc ttcgctagtc aggaacgaag ccgatcggcg cgcggtcgag cgcgcgctcg
     1501 agtacatggc gctacagccg agcacgaaga ttgctgatat cgcaatcgat cgcgtcttca
     1561 ttggttcctg cacgaactcg cggattgaag atttgcgcgc ggcggcccgc gtcgttagtg
     1621 gccatcgcgt aaacaaagcc gttcgcgcaa tggtcgtgcc cggatcacaa acggtcaaac
     1681 aggcggcgga agaggaagga ctcgatcaga tttttcgtga cgcgggcttt gaatggcgcg
     1741 aatctggttg ttccatgtgc ctcggaatga atccggacat cctgcaacca ggagaacgtt
     1801 gtgcttcaac cagcaatcgc aacttcgaag gtcgccaggg gcgaggcggc cgtacacatc
     1861 tggtcagtcc accaatggcc gcggcggccg caatcgcggg ccattttgtt gatgtgcgaa
     1921 gctggaacta caagtagagt ttcaagtcgc aagtttcagg tttcaagttg gagtcgcgaa
     1981 cttgaaactt gaaacctgga acttgaaaca gcgatgaaac catttcgatc acatacaggc
     2041 ctggttgccg tcttggatcg ccctaacgtc gacacggatc agatcatccc gaagcaattt
     2101 ctgaaacgcg tcgagcggac cggtttcggt cagtttcttt tctacgactg gcggtttctc
     2161 ccgaatgaac agcctaatcc cgattttccg ctgaacgatc cgcgctatcg cgctgcctcg
     2221 attctaattg ccggcaagaa tttcggttgc ggctcgtcgc gtgaacacgc gccgtgggcc
     2281 ctcgctgatt acggctttcg cgccatcatc gcgccgtcat ttgcggacat ctttgcgaac
     2341 aattgcatga agaacggtct gctcccggtg acgttgaccg atgcagaagt ggccgaattg
     2401 atgcggcgag cgcccgagac cgaagactac gaggtcacag tcgatcttga aaacaggatc
     2461 gtcgctgaca caaacggctt ttcagcgact tttcaggttg gcgactttca gcgttactgt
     2521 ttgctcgaag gactggacga cgtcgggcta actttaaaac acgtgacaga cattgccggc
     2581 tacgaaagtc ggcgacccgc ctgggcaccg cggattattt cctaagccgc aaaccaagtt
     2641 atcatgctcc ctcaactccg cctctgaggt tggaagatga gcgaatcaac ttgtcggaaa
     2701 tcaactgaat tccttagccg tgttgccgcg acacttttta ctccgcggat tatcacagcg
     2761 tctctaatac tggctttgtt ggccagcttg tcacccgctc aaactgcgac gcccaaagcg
     2821 cccgccgcgg gctatgtgct gaagccggcg cgagtcttcg acggcgagtc tgcccagttg
     2881 cgcacggatt gggtcgtgct cgtgcgtggc gaaaagatcg aggccgttgg tccggcgagt
     2941 gaaatcaaag cgccctccgg agcaaaagtg atcgagctgc gcgggatgac tttaatgccg
     3001 gggctgatcg atgcgcattc gcacgtgctg ctacatccct acagcgaaac ctcctggaac
     3061 gatcaggttg cgcgcgagag tctgagcctg cgcgtggcgc gcgcgacgaa tcatctgcgc
     3121 agcagtttga tggcggggtt tacgacgttg cgcgatctcg gaactgaagg cgcaggctat
     3181 gcggatgttg gtctgaagca ggcggtgcag cagggaatca ttcccgggcc gcgcttaatc
     3241 gtgacgaccc gcgcgattgt cgcgaccaac acctacggac cgaagggtta cgcctctgaa
     3301 tggagcgtcc cgcagggcgc cgaagaagcc gacggcctcg acaacctgac ccgcgtggcc
     3361 cgcgatcaga tcggcaaagg cgcggattgg atcaaggtgt acgccgacta tcgttggggc
     3421 gcgggtggca cggcgcacgc gactttcacg ctcgacgaaa tgaagttgat cgtcgaggtg
     3481 gctaagagcg gcggcattcc cgtcgccgcg cacgccagtt caaccgaagg cgcgcgccgc
     3541 gcgattctcg ccggtgtcga aacgatcgaa cacggtgacg ggctgacgcc ggagcttttt
     3601 cgcatgatga aggaacgtgg catcgctttc tgtccgacgc tttcggtcgc cagcgccgcg
     3661 aacatagaaa acaagaagcg ggttttcaaa caagcgctcg aatcgggggt ggcgattgcg
     3721 aatggcagcg acgtgggcgt cttcgcgcac ggcgataacg caaaggagat ggaaacgatg
     3781 gtggcctggg gaatgccgct gatcgacgcg cttcgctcgg caacatctgt ggccgcgcgc
     3841 gtgctgcatc tggaagacaa aatcggtttc gtgaagagcg gactcgtcgc cgatctaatc
     3901 gccgtggaag gcgatccaac ccgtgacata tcaaccctgc gtcgcgtacg gtttgtgatg
     3961 aagaacggcg aagtttacaa gcagccctag cgaccacatc tcatattccc aattcataat
     4021 gtcttcaacg ccggtcacga acgtcacgca actgctgctt gaatggcgcg gtggcagtca
     4081 acaagcgctg gatgcgctga tgcccgtggt gtacgacgaa ctgcggcggt tggcgcagca
     4141 ctacatgcgc ggtgaacggc ctgaacacac gctgcaagcg acggcgctgg tgaacgaagc
     4201 ttatctgcgg ctggtggaca tgaaagtttc gtggcaggac cgcgctcatt tctttgcggt
     4261 ggcggcgcgg ttgatgcggc gcatgctggt tgatcatgcg cgtacgcagc atcgcgccaa
     4321 gcgcgagggc ggtccgaaag tctcgctcga tgatgcgttg gaggtttcat gcaagcccgc
     4381 ttcagacctt ctggcgctcg atgaagcttt agagcaactc gcgacgtttg atcaaagaaa
     4441 gagcgaaatc gtcgaactgc atttcttcgg cggtttaggc aatgacgaag tggctgaagc
     4501 gctcggcatt tcacgcgcga cggtgcagag ggaattgcgg atggccaagg cttggctgaa
     4561 tcacgaatta aaaaacagta atgagtgatg agtgatgagt aatgagtgat gagtaatgag
     4621 taatgagtaa tgagtaatga gtggagttgc tttgccttca gagtgtgatc aagtaattcc
     4681 gacgcgtagc gtcgttatga ttttagccca gccttttaag gctgggatca tgttgagc
//
LOCUS       DATDBY010000076         2663 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_944348, whole genome shotgun sequence.
ACCESSION   DATDBY010000076 DATDBY010000000
VERSION     DATDBY010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_944348"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..853)
                     /locus_tag="VIT19_01505"
     CDS             complement(80..853)
                     /locus_tag="VIT19_01505"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEY5837678.1"
                     /translation="MLNFAIQTARDAGRVLAERFGRNLRISNKSELDLVTESDLASER
                     LIIDRIKTHYPRHTILAEESGTNPPAAEGAQSDWRWIIDPLDGTTNYAHGYPCFCVSM
                     GLERNGTLELGVIYDPLRDEVFAAERGQGAALNGKRIHVSPTPSLASALLCTGFPYDV
                     RERGQFARHFTNFIMNAQGVRRDGAAALDLAYVAAGRFDGFWEEGLKPWDVAAGILLI
                     EEAGGRVSDYHNRPLDIFTPPILATNGLIHEQMMRVLAI"
     gene            1009..2589
                     /locus_tag="VIT19_01510"
     CDS             1009..2589
                     /locus_tag="VIT19_01510"
                     /inference="COORDINATES: protein motif:HMM:NF013155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837679.1"
                     /translation="MRHQRSLILKAVLLLGLVLPCVSIASAQPPAPTLARSAAEQRTA
                     RHFESIRKSPPQQWAFLLQMPKGADLHSHLSGAIYAESYIQWAADTGLCINTRTLALS
                     APPQSKQCDPKSEQPPASAALTSGVLYRQMVDAWSMRNWQLSGQSGHDHFFDTFVKFG
                     PATWGQNGKMLAEAVARAARGKVLYVELMLTPDGTTTGVVSSQIGDKVGWDGNFENTF
                     NKLKANGIDTAAATGIKNLRDAEAEKDRVLKCGTAQADPGCSVTIRYIAQVGRTAPLG
                     QVFAQMVTGFALANDPSSKVVALNLVQPEDALSAMKNFSVQMQMLQFLRPRYPQAHLT
                     LHAGELAPGLVPPENLTFHIRESVLIARADRIGHGVDIMHENNPDELLKEMARRDVLV
                     EICLSSNDLILGVSGSEHPLATYIKQGVPVALATDDEGVARSEISREYLKAAAEQGLG
                     YLQLKTMARHSLQYSFVSGGSLWSDGRKFTAVAQCRQDIIVMRLTSNACKQFVENSEK
                     AKLQWRLEEQFREFERVW"
BASE COUNT          586 a          735 c          777 g          565 t
ORIGIN      
        1 tgacccgcct ggtttgcgcg gactctattg cagccacgcg ggcgtgtcaa cggcggttgg
       61 aactgagaca agcagggaat tagatcgcca gcacgcgcat catctgttcg tgaattaaac
      121 cgttggtggc gagaattggc ggcgtgaaaa tgtccagcgg gcggttgtga tagtctgaaa
      181 ctcttccccc ggcttcctca atcaacaata tgccggcggc aacatcccag ggcttcaaac
      241 cttcttccca aaatccatca aatcgtcccg cggcaacgta agcgaggtcg agcgcggcgg
      301 cgccatcgcg tcgcacgccc tgcgcgttca tgatgaagtt cgtgaagtga cgcgcgaact
      361 ggccgcgctc acgcacatcg tacgggaagc cggtgcacaa cagtgcgctc gccaggcttg
      421 gcgtcggcga aacatgaatg cgctttccgt tgagcgccgc gccctgtccg cgttcggcgg
      481 caaacacttc atcgcgcagc ggatcgtaga tgacgccgag ctccaacgtt ccgttgcgtt
      541 cgaggcccat cgaaacacag aaacatggat agccgtgcgc gtagtttgtc gtgccgtcga
      601 gcggatcgat gatccagcgc caatcgcttt gcgcgccttc agcggccggt ggattagtgc
      661 ccgattcttc cgcaaggatc gtatgacgag gatagtgagt cttgatgcga tcgatgatca
      721 gacgttccga cgccaaatct gactcagtaa ccagatcgag ttcgctcttg ttgctgatgc
      781 gcaggtttcg tccgaacctt tcggccagca cgcgtcccgc gtcacgcgcg gtttgaatgg
      841 caaagttgag caaagattcc tctggtgtcg tagtggttca taacttttac cacagagaac
      901 accgaggcac acagaccacg ttacttctct gaaagagctt gtcaaataat tcttgatgat
      961 ggacgatgcg tcactcgacc caatcgcgca caaatcaagg agctcgacat gcgtcatcaa
     1021 agatcgttaa tcctgaaggc agtcttgctg ctgggacttg ttctgccgtg tgtttcaatc
     1081 gcgtcggcgc aaccacctgc gccaacgtta gcgcggtcgg cagccgaaca aaggaccgcg
     1141 cgtcacttcg aatcaattcg taaatcgccg ccccaacagt gggctttcct gcttcagatg
     1201 ccaaaaggcg ctgatttgca cagtcacctt tccggcgcga tctatgccga gtcgtacatt
     1261 cagtgggccg cggacactgg tttgtgcatc aacacgagga cgttggcttt gtccgcgccg
     1321 ccgcaatcga agcagtgcga tccgaaatcc gagcagccac cggccagtgc cgctttgacg
     1381 agcggcgtgc tttaccggca gatggttgac gcctggtcga tgcgtaactg gcaactttcg
     1441 ggacaaagtg gtcacgatca tttcttcgac accttcgtca aatttgggcc ggcaacatgg
     1501 ggacagaacg gaaagatgct ggctgaagcg gtcgcgcgcg cggcgcgcgg caaagtgctt
     1561 tatgtcgagt taatgctgac tcccgacggc acgacgactg gcgtcgtgtc cagtcagatc
     1621 ggcgacaaag tcgggtggga cggaaacttc gaaaacacct tcaacaagtt gaaggcgaac
     1681 ggtatcgaca ccgccgccgc aaccgggatc aagaatctgc gtgatgcgga agccgaaaaa
     1741 gatcgcgtgt tgaagtgcgg tacggcccag gctgatcccg gctgctcggt gacaattcgt
     1801 tacatcgctc aagtgggccg gacggcgccg ctgggccagg tcttcgcgca gatggtaacg
     1861 ggtttcgcgc ttgctaacga cccgtcatcc aaagtcgtgg cgttgaatct cgtgcaacca
     1921 gaagacgcac tgagcgcgat gaaaaacttt tcggttcaga tgcagatgct gcagtttttg
     1981 cggccgcgct atccacaagc acacctgact ttgcatgcgg gagaacttgc gccgggattg
     2041 gtgccgcccg aaaacttgac ctttcatatc cgcgagtcgg tgctgattgc gcgtgccgat
     2101 cgcatcggtc acggcgtgga catcatgcac gaaaacaatc ctgacgagct cttgaaagaa
     2161 atggcccgcc gcgatgtgtt ggttgaaatt tgtctgtcga gcaacgatct gattctcggc
     2221 gtcagtggct ctgagcaccc gctggcaact tacatcaagc aaggcgtccc ggtggcgctg
     2281 gccaccgatg atgaaggggt cgctcgttca gagatctcgc gcgaatattt gaaagccgcc
     2341 gcggaacagg ggctgggcta tttgcaattg aagaccatgg cccgtcacag ccttcaatac
     2401 tcgtttgttt cagggggcag cttgtggagt gacggccgaa agttcactgc ggtcgcccaa
     2461 tgccgtcagg acatcatcgt catgagactt acctcaaacg catgcaagca gtttgtcgag
     2521 aacagtgaga aggcaaagtt gcagtggcgg ctggaggaac agtttaggga atttgaacgg
     2581 gtgtggtgag ctgtttcgat cccacaattc ggcgtcggac tggttaggcc tgtcgcccca
     2641 aacccatcaa agcggaacat tgt
//
LOCUS       DATDBY010000077         4380 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1763986, whole genome shotgun sequence.
ACCESSION   DATDBY010000077 DATDBY010000000
VERSION     DATDBY010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4380
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1763986"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..295
                     /locus_tag="VIT19_01515"
     CDS             <1..295
                     /locus_tag="VIT19_01515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837680.1"
                     /translation="QEEDEDLKITFEKGQLSVKSKKQPLIVVLYGIANQLGIPLEVKT
                     AVEDLVTVNIIKSSLESALQELAPNIKLYVRADLMIGDRQPLRLVLVGPDKKS"
     gene            392..565
                     /locus_tag="VIT19_01520"
     CDS             392..565
                     /locus_tag="VIT19_01520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837681.1"
                     /translation="MDGSDLIIETATTEVKPGETENPTSAKKKFIVPEISVPVDVLEA
                     TTFFQLAASGGTN"
     gene            589..1635
                     /locus_tag="VIT19_01525"
     CDS             589..1635
                     /locus_tag="VIT19_01525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837682.1"
                     /translation="MESTTRPDPVSRVPTYFERPAIGSVFEIAGRFILFESNGAELQG
                     LSEALSEYHCTPVRPGTCRAPDATIRFQTEDIPSVVTGFERFEISGGGIGYTDGRTCV
                     FDFEHARVLVHPGDTHQIDLFVRRELDFRRFEDLQVLNYAISTALRRCDVYEMHSGAV
                     VEPQTGRGVLFAGASGSGKSTLTLQLVANGWQYLTDDVLLLKSVGGMMKAYPVRRAFA
                     VTRSTVDASGSRARAAFANADWSNGLKKSFMPQECFPGAFSPNCEPRSIFFPTITEED
                     QSVVRRLTRSETMIQLIKLCPWSCYDPVTSPGHLHALSSLARQCAGFMLLAGRDLLRD
                     PARASDLTLEYTTV"
     gene            1713..2780
                     /locus_tag="VIT19_01530"
     CDS             1713..2780
                     /locus_tag="VIT19_01530"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY5837683.1"
                     /translation="MDERTYGSQRVSVELTNICNLHCSYCLRDEDALYHTAARFFPVS
                     LLQEIARHGREAVRLSHISFTGGEPTLHPQFADAIAAIAGEGLTTSFVTNGWHFDRVW
                     PVIAANREAVTYVAFSLDGATREAHDKWRGQGSFVRLVSAFSRCQHYEFPFEIKVVVR
                     KDTLPHLEQIAIFAARMGAVALSFGHLLPTSDEFDHELSLTEHERTMAEQEIALLARM
                     FQMPIRIDVGYYNIDSSRPPCSPLAGASGHIDYRGYLTLCCNLSGFRGAAGEADVAAD
                     LNTEGFAAGFARLRRVADQQLENWRTTLAEYEARDERPELAVGSPCLFCLQTLGKTPW
                     REVEASTLHRRALPVVKSAPA"
     gene            2960..3499
                     /locus_tag="VIT19_01535"
     CDS             2960..3499
                     /locus_tag="VIT19_01535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837684.1"
                     /translation="MRLSHGARDRGLLARYLVLTICLGVPLLLSFAFVRNLYPFAAST
                     MMRTGGDLHVGWTYYLVRGETLTGEIIDLPPVELTNALSNVAWALVPAVVENKSFTIS
                     SPHPANLALINEAGGTEKLPPARRVDDLLKAWGSVYNARLPGDSPQRLRAVRVEEYHW
                     AGGSYGNYDKFMRSWRTEL"
     gene            3481..>4380
                     /locus_tag="VIT19_01540"
     CDS             3481..>4380
                     /locus_tag="VIT19_01540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837685.1"
                     /translation="MENGTLKRIVPTDAAALGVIRAAICGFVLLQMLLTDFVAFGHLP
                     TTVMRPTGAMQLLPWRFYDALITPQGMLILKALLVVSLLCAGLGLFTAITTKSAALLF
                     LFYEGLVRSFGLFNHDEMIGVYILVVLAFTPCGDDLSIDKRWGRATPRLPGIAYGYPI
                     LLMRILVAWSYFSSALIKMRVTGLRYFSPDNLPVVSIWHSLDNLHESQHKLAFWLPNI
                     RGITGAIVVVALLWEFAFPLAIFSKRARRIILPFGIVFHLFTIFFMNISFPYHLAAYV
                     VFIDWPWVAARIARSKIFQALRPS"
BASE COUNT          913 a         1172 c         1240 g         1055 t
ORIGIN      
        1 acaggaagaa gacgaggacc tgaagatcac gttcgagaag ggccagctct cagtgaagtc
       61 aaagaagcag ccgctgattg tggttcttta tggaatcgcg aaccagctcg gcatcccgct
      121 cgaggtgaaa actgcagtgg aagatctggt gaccgtcaac atcatcaaat cgtcgctgga
      181 atctgcgctt caggagttgg ctccgaacat caagctgtac gtgcgagccg atctgatgat
      241 tggcgaccgg cagcctctcc ggttggtgct tgtcgggcca gataaaaaat cgtagaatcc
      301 acgcccacgt tacagagagc ttggtttgcg aactgttcgt gtaatatgct gaggccgtat
      361 cggccgttat tagagcagga ggataccctt tgtggatgga tctgatttga ttatcgagac
      421 tgctactact gaagtgaaac cgggcgaaac cgagaaccct acttccgcga agaagaaatt
      481 catagtccca gaaatatcgg taccggtgga cgtcctggaa gcgacgacat ttttccagct
      541 tgccgcgagc ggcggaacca actagcaggc ctcgcagtac tttttgcgat ggaaagtacg
      601 acccgtcccg atcccgtttc ccgggtacca acatattttg agcgaccggc catcggcagc
      661 gtttttgaga tagccggtcg ttttattttg ttcgaatcaa acggcgcgga gctccagggc
      721 ctttctgaag ctctttccga ataccattgc acacccgttc gccctggtac ttgccgggcg
      781 cctgacgcaa cgattcgttt tcaaaccgaa gatattccgt ccgtcgtaac cggctttgaa
      841 cggtttgaga tttcaggggg cggaattggc tacacggatg gtcgcacgtg cgttttcgat
      901 ttcgagcatg cacgcgtcct ggttcatcct ggcgacaccc atcaaatcga tttgttcgtg
      961 agaagagaac tggactttcg gcggttcgaa gacttgcaag tcctgaatta tgcgatctcg
     1021 accgcacttc gccgttgcga tgtgtacgag atgcacagcg gagcggtcgt tgaaccgcaa
     1081 accggacggg gtgtactctt cgcgggcgcg tcgggcagtg gcaaatccac acttactctt
     1141 caactggttg ctaacggatg gcaatacctg actgacgatg ttctgctttt gaagagcgtt
     1201 ggcggaatga tgaaggctta tcccgtacga cgggcgttcg ccgtaacccg atcaacagtc
     1261 gatgcaagtg gcagtcgcgc gcgcgcagca tttgcgaacg cggattggtc gaacggtttg
     1321 aagaaatctt ttatgccgca agagtgtttt ccgggggcat tttcgcccaa ctgtgaaccg
     1381 cgttcgattt tctttccgac gatcacagag gaagaccaaa gcgtcgtaag acggctgacg
     1441 cgcagcgaga caatgattca gttgatcaag ctgtgcccat ggtcatgcta cgatcccgtc
     1501 accagccccg gccatttgca tgcgctcagc tcgctggcga gacaatgcgc aggctttatg
     1561 ttgctggccg gaagagattt acttcgcgat ccagcgcgcg catcagactt gacgctggaa
     1621 tatacgacgg tttagaccgg cggacttgcg ccagacggca tgagtgccgc ctctaaataa
     1681 tcaccatctt cggttggcaa taggtttctg atatggacga gcgcacctac ggttcgcaac
     1741 gcgtcagcgt agaacttacc aacatttgca atttgcattg tagctattgc ctgcgcgacg
     1801 aagatgcgct gtatcacact gcggccagat tctttccggt ttcacttctg caagaaattg
     1861 cccggcacgg gcgtgaagcg gttcgccttt ctcacatctc ttttaccggc ggtgagccta
     1921 cactccatcc tcagttcgcc gacgccattg cggccatcgc aggtgaaggg ctgacgacga
     1981 gtttcgtgac taacggttgg catttcgatc gcgtctggcc ggtgatcgcc gccaaccgcg
     2041 aagcggtcac gtacgtggcg ttcagcctcg acggcgcgac ccgtgaagcg cacgacaaat
     2101 ggcgcggcca gggatcgttc gtgcggctgg tcagtgcgtt ttctcgttgc cagcattacg
     2161 aattcccttt cgagattaaa gtggtagtcc ggaaggatac tttgccgcac ctcgagcaga
     2221 tcgcgatttt tgcggcgcgg atgggagcgg tggcgcttag tttcggacat ctgttgccca
     2281 cttcggacga gttcgatcac gaactcagtt tgaccgagca cgaacgaaca atggccgaac
     2341 aggagattgc tctcctggcg cggatgttcc agatgccgat tcgaatcgac gtcggttact
     2401 acaacatcga ttcaagcaga ccgccgtgct cgccgctggc gggcgcgagc ggccacatcg
     2461 attatcgcgg ctatctcaca ctgtgctgca acctgtcagg ttttcgtggc gcggccgggg
     2521 aagccgatgt cgcagccgat ttgaacaccg aaggttttgc cgcgggtttt gcccggctgc
     2581 gccgggtcgc ggatcagcag ttagagaatt ggcgaacaac tttggccgag tatgaggcgc
     2641 gtgacgagcg acctgaatta gcggttggtt cgccgtgcct tttctgcctt cagactcttg
     2701 gtaaaacccc ctggcgggag gttgaagcaa gcacgctgca tcgccgagcg ttgccggttg
     2761 ttaagagcgc gcctgcttaa acgatcgtgg tctgaaaccg tccccagggt gtgccgattc
     2821 tgcgcaccag cgataatcgc cacttcacgc actcgtgaag ccgccgaatt tgggcgaggg
     2881 acacttatct gcgcctgcaa agatcaaaaa ccagaataac ctgcccaatg acacgatgag
     2941 tcacgatcct gaggagacta tgcggttgtc ccatggtgct cgcgaccggg gcctgttagc
     3001 gcgttatctc gtgctcacga tctgcctcgg cgtgccgtta cttctaagct ttgcgtttgt
     3061 cagaaatctt tatccgttcg ccgcttcgac gatgatgaga acgggcggtg atctgcacgt
     3121 tgggtggacg tattacctcg tgcgcggcga aacgttgacc ggcgaaatca ttgatctgcc
     3181 accggtagaa ctcacaaacg ctctgtcgaa tgttgcctgg gctttggtcc cggcggtggt
     3241 cgaaaacaag agcttcacca tctcatcgcc gcatcctgca aatctcgcat tgataaatga
     3301 agcgggtgga accgaaaagt tacccccagc tcgcagagtc gacgatctgt tgaaagcgtg
     3361 gggatcagtt tacaacgcgc gacttcccgg cgactcgcct caacgtttaa gggcggtaag
     3421 agtcgaagaa tatcactggg cgggcggaag ctacggcaac tacgacaagt ttatgcggtc
     3481 atggagaacg gaactttaaa gcgaattgtg ccgaccgacg ctgccgcgct gggtgtgatt
     3541 cgcgcggcaa tttgcgggtt tgtgctgctg caaatgctgc tgaccgactt tgtagcgttt
     3601 ggtcatcttc ccaccacagt gatgcgtccg accggcgcga tgcaactcct tccctggcgg
     3661 ttttacgatg ccctaataac gccgcaaggc atgcttatcc tgaaagccct gctcgtcgtt
     3721 tcgttattgt gcgccggcct cggtctcttc accgctatca ccaccaagtc tgcggcactg
     3781 ctctttctgt tttacgaagg actggtgcga agcttcggtc ttttcaatca cgacgaaatg
     3841 atcggggttt atattcttgt cgtgctcgca ttcacgccgt gcggcgacga tttatcaatc
     3901 gacaaacggt gggggagagc tacgccgcgc ctgcccggta tcgcctatgg ctatcccatt
     3961 ctcctgatgc ggattttggt cgcgtggtct tacttcagtt cggctttgat aaaaatgcga
     4021 gtgaccggcc tgcgatattt cagcccagac aatttgcccg tggtttcgat ctggcattcg
     4081 ctggacaatt tgcacgagtc gcaacacaag ctggcgttct ggctaccgaa tatccgggga
     4141 ataacggggg cgattgtggt tgtggcgttg ctgtgggaat tcgctttccc gctggcaatt
     4201 ttttccaaac gggcgcggcg gataattttg ccgttcggga tcgtttttca tttgttcacg
     4261 atcttcttca tgaacatctc gtttccttat cacctggccg cctatgtcgt tttcatagac
     4321 tggccatggg tggcggcgcg catcgcgcga agcaaaatct ttcaggcgct aaggccttct
//
LOCUS       DATDBY010000078         4621 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1344206, whole genome shotgun sequence.
ACCESSION   DATDBY010000078 DATDBY010000000
VERSION     DATDBY010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4621
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1344206"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..609
                     /locus_tag="VIT19_01545"
     CDS             <1..609
                     /locus_tag="VIT19_01545"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HEY5837686.1"
                     /translation="ERAPRSISLRERLREIAAAHKHPEEAARHCLALASLYIERDNFD
                     AAHDRLLEAKQLDNRISIASGLEAIRRARHPEIKTEAAAPRSTPFTRKTSVTFAGDLS
                     VISVFDAIQAIENSRQTGVLTLQNSTQTGKVLFNDGQIVGAECGKLLAHEGFRQIVEI
                     TGGTFDFEKSAQPHPVTIEAASNTNLILDSLRQMDEDAVSSE"
     gene            618..1274
                     /locus_tag="VIT19_01550"
     CDS             618..1274
                     /locus_tag="VIT19_01550"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5837687.1"
                     /translation="MRWQAQRDTALDSPPAKPPDPKRRRRFALPAHSKSDVDLLSLDY
                     TIRKACLDDRDAIQELIAASARGLSQTDYSNQQIESAIKDVFGVDTSLIADGTYFVAE
                     HDRELVACGGWSKRKTLFGGDQFATRDTSELDPQSEPAKIRAFFVHPQWARKGLAQAI
                     LSRCEAEARAAGFRSVELMATLPGVRFYAACGYEESAQFDYEMASGGTLPLVPMAKEL
                     "
     gene            complement(1306..2067)
                     /locus_tag="VIT19_01555"
     CDS             complement(1306..2067)
                     /locus_tag="VIT19_01555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837688.1"
                     /translation="MSLEFAVQYLCILRARYPEKHLRDWGRLSSLHAAITTGDRSAPT
                     EDKVKWIQDAAEEIDQLQTESAICADCPACLPLEVAGQGEALGCLGRINYPIDVEFEK
                     FIANRVQLALDTLDTADWPRLLHILIDPESPFDGEATKELRRVTTAAGLRFFELRLPI
                     KLARAGRQLTTDNIFDLLAGFRSEDAAVTTYTREFPATATADYYDFLDLLLRNDVSEL
                     EATRLHERSRNYIQFVRLLSAFERAEALETRVLVD"
     gene            complement(2239..2457)
                     /locus_tag="VIT19_01560"
     CDS             complement(2239..2457)
                     /locus_tag="VIT19_01560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837689.1"
                     /translation="MEVTKALAALQPLYRKGNIEIVTRDGARVRGIVRSMKTTQALTT
                     PSVKVERGDGQIVKVPFSAIVEIIDHNK"
     gene            2609..3589
                     /locus_tag="VIT19_01565"
     CDS             2609..3589
                     /locus_tag="VIT19_01565"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEY5837690.1"
                     /translation="MQPQNNLNNPSGGTGDTGGVVCSECGAPMPQGMRFCRACGHRLG
                     EGSAEYTETVRLPHAPATGPQGSPFTPNYAAPLAQSGTSFTYKKKRRISGMAWIIILI
                     AALFVLGGVLTAVRRSVSRPPFSGTVSAPRSHFGVDGFEDATGGVTFDNVEPPGSPAD
                     LAGLVGGDIIVTFDGRAATDEDEMINLLRQTPIGKTVEVTYIRDGETKTTQLTTIAEA
                     EVNHLRRIAGDRPEGRGYFGFDDDRVTKIAEPATKTYGVRLDYIERNGPADLFGLKDG
                     DIITTFDRVPIRTGGELLSRVRRAMPKTPVEVTVIRGGETLKIPVTIGRG"
     gene            3768..4457
                     /locus_tag="VIT19_01570"
     CDS             3768..4457
                     /locus_tag="VIT19_01570"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEY5837691.1"
                     /translation="MTWILIGIALLFAVGGVMTALRKNVAPPQTIRTPPQSYLGINEF
                     EDATGGVTFEDVWPPDAPADKAGLVGGDIITAFDGHATVDESEMMRLLTVTPSGKTVE
                     IVYIRDGETKKTSLTTLSQSDVLQLDGAFTNRGTSRGQLGFEDIDAVPVPGKNIKGVL
                     LERISPSGPAALAGLLDGDIIIEFDGVPIRTVSELVLRARRAVPYSTVKVVVIRGAEQ
                     LEIPVKVGKRG"
BASE COUNT         1038 a         1311 c         1312 g          960 t
ORIGIN      
        1 gaacgcgcgc ctcgatcgat tagcctgcgc gagcgtttgc gagaaatcgc tgcggcacac
       61 aagcaccctg aagaagctgc tcgtcactgc ctggcgctgg ccagccttta catcgaacgt
      121 gacaattttg acgccgcgca cgatcgtttg ctggaagcga agcaactcga caaccgcatt
      181 tcgatcgctt caggtctgga agctattcgc cgcgcgcgcc atccggaaat aaaaaccgaa
      241 gccgctgcgc ctcgaagcac gccgttcacg cgaaagacga gcgtcacgtt tgccggcgac
      301 ttgtcagtaa tcagcgtctt tgatgcgatt caggcgattg agaattcgcg acagacgggt
      361 gtgctgaccc tgcagaacag cacgcaaacc ggcaaagtat tatttaacga cgggcaaatc
      421 gtcggcgccg aatgcggcaa gctcctcgcg cacgaaggct ttcgacagat tgtcgaaatc
      481 accggcggca cattcgactt tgagaaatct gcgcagccgc atcccgtgac aatcgaagca
      541 gcgagcaaca ccaacttgat tctcgacagc ctgcgacaga tggacgaaga cgcagtgagt
      601 agtgagtagt atttggagtg cggtggcaag cgcagcgcga caccgctttg gattcgccgc
      661 ccgcaaaacc gcccgatcca aaacgccgtc gccgcttcgc tctgccggcg cactccaaat
      721 cagacgtaga tcttctctcc ttggactaca caattcgcaa agcttgtttg gatgaccgag
      781 atgccattca agaactgatc gcggcgtcag cgcgtggctt gagtcaaacc gattactcaa
      841 accagcagat cgaatcagcg atcaaagacg tcttcggcgt ggatacgtca ctgatcgcag
      901 acgggacgta ctttgtcgct gagcacgacc gcgaattagt cgcgtgcggc ggctggagca
      961 aacggaagac gctgtttggc ggcgatcaat tcgcgacgcg cgatacgtcg gaactcgatc
     1021 cccagtccga gccggcaaag atccgggcgt tctttgttca tccgcaatgg gcgaggaaag
     1081 gactcgcgca ggccattttg tcgcggtgcg aagctgaagc gcgcgcggcc gggtttcgct
     1141 cggtcgaact gatggccacg ctgcccggag tcaggtttta cgcagcctgc ggttacgaag
     1201 agtcggcaca attcgattac gagatggcaa gtggcggcac gttgccgttg gtgccgatgg
     1261 caaaggaatt gtaagaccga agcgggcagg atgcccggct cccaatcaat ccacgagcac
     1321 ccgggtctcg agcgcttcag ctcgctcgaa tgcggatagc aagcgcacga actgaatgta
     1381 gttacgacta cgctcatgca aacgcgtcgc ctccagctcg ctgacatcgt tgcgaagcag
     1441 cagatcaaga aagtcgtaat agtcggccgt cgcggtcgcc ggaaactccc gcgtgtaagt
     1501 cgtcacggct gcatcttccg aacgaaagcc ggcaagcaaa tcaaaaatgt tgtcggtcgt
     1561 gagttgtcta cctgcgcgcg cgagcttaat cggtaatcgc agttcaaaga accgcaagcc
     1621 ggctgccgtc gtaacgcgtc gtagttcctt ggtggcttca ccgtcaaaag gcgactcggg
     1681 atcgatcagg atgtgaagca gacgtggcca gtcggccgtg tccagagtgt ccagcgctaa
     1741 ttgcacgcgg ttagcaatga acttctcgaa ctcgacatca atcggatagt tgatacgtcc
     1801 cagacagccg agcgcttcac cctgcccggc aacctccagc ggcagacacg ccggacaatc
     1861 tgcacagatg gcactctccg tttgcagctg atcgatttct tccgccgcat cctgaatcca
     1921 tttcactttg tcttcagtcg gtgcagagcg gtcaccggtc gtgatcgccg catgcaaact
     1981 gctcaaacga ccccaatcgc gcaggtgctt ttccgggtag cgagcgcgca agatgcagag
     2041 atactgaacg gcgaattcca gcgacatgag aacggtcagt tgtcagttgt cagttgtcag
     2101 ttgtacttcg tactttgtaa tggcttttta ttctttgatt cttatcaagt cggctgcgtg
     2161 tgacgattaa gtactaagca catagcacga agcacgaccc taacaacgga ccactgacga
     2221 ctgacaactg acagttcctc acttattgtg atcgataatt tcgacgatcg ctgaaaaagg
     2281 gactttgacg atctggccgt cgccgcgttc gacttttacg ctgggcgtcg tcagcgcctg
     2341 agttgtcttc atactgcgga caatcccccg gacgcgcgcg ccgtcacgcg taacaatttc
     2401 aatattgcct ttgcggtaaa gcggctgcag cgccgcgagg gctttggtta cttccattgt
     2461 tttacgagta ggtttattga atactactcg ctctggttcg aatccggaaa cggtgcgtgt
     2521 ctcgagagcc ggagcacctg aaattttcga cgcaaccatt ccatccaagt agtcgtataa
     2581 ttttgcggtt cactaaaccc aggaatcaat gcagcctcag aacaacttga acaatccgtc
     2641 aggcgggacc ggtgacactg gaggggttgt ctgctctgag tgtggggccc ccatgcccca
     2701 gggcatgcgg ttttgtcgcg cctgcgggca tcgtttgggc gaaggctcgg ccgagtacac
     2761 cgagaccgtg cgcttaccac acgcgccggc caccgggccg caaggaagcc ccttcacgcc
     2821 caattacgcg gcgccgctgg ctcaatccgg cacgagtttc acttacaaga agaagcgaag
     2881 gatcagcggc atggcgtgga tcatcatcct catcgccgcg ctgttcgtgt tgggcggagt
     2941 tctgacagct gtgcgcagga gcgtcagccg tccgccgttc agcggaacgg tttcagctcc
     3001 gcgttcacac ttcggcgtcg atggattcga agacgcgacg ggcggtgtta cgttcgacaa
     3061 cgtcgaaccg ccgggcagtc ccgcggatct agccggcctg gtcggcggcg acatcatagt
     3121 gactttcgac gggcgcgcgg ccacggatga agatgagatg attaacctgc tgcgtcagac
     3181 gccgattggg aagaccgttg aagtcaccta cattcgcgac ggtgagacaa agacaacgca
     3241 gttgacaacg atagccgagg cagaagtaaa ccatctccga cgcattgccg gcgaccgacc
     3301 cgaggggcga ggctattttg gatttgatga tgatcgcgta acaaaaattg cggagccggc
     3361 caccaagact tacggcgtgc ggctcgacta tattgagcga aatggcccgg ccgatttgtt
     3421 cggactgaaa gacggcgaca tcattacgac gtttgaccgc gtgccgattc gtaccggtgg
     3481 agagcttctg tctcgcgtgc gaagagccat gccgaaaact cccgtagagg tcaccgtgat
     3541 tcgaggtggc gagactctga aaatccctgt gacgatcggt cgcggttagc cgccgagcat
     3601 cactaccgaa aatattctta caattgcatc agcgtcacag gcgcgctatt tttgcccgtg
     3661 ctaagcgcaa agtcatgcag ccgcagcaaa gcttgaataa ttcgccttca tcacccacta
     3721 cgtctcaaac ccgccccgct gctaaacgaa ggcgtcgggt tggcggaatg acatggattc
     3781 tgatcggcat cgcgctgctt ttcgcagtcg gcggtgttat gactgcactg cgcaagaatg
     3841 tcgctcctcc tcagactatt cggaccccgc cccaatcata tttgggcatt aatgaatttg
     3901 aagatgcgac gggcggcgtc acgttcgagg atgtgtggcc gcctgatgcc ccggccgaca
     3961 aagctggact ggtgggaggc gacatcatca ctgctttcga tggccatgca accgtggacg
     4021 aaagcgagat gatgcggttg ctcactgtta caccgtccgg taaaacggtc gaaatcgtgt
     4081 atatccgcga cggcgagacg aaaaagacca gccttacgac tctctctcaa tcggacgtgc
     4141 tacaactgga cggagccttc acgaaccggg gcacgtcgcg cggtcaactg ggatttgagg
     4201 atatcgacgc cgtgcctgtg ccgggcaaaa acatcaaagg ggtactactc gaacgtatta
     4261 gccccagtgg tccggcggcg ctcgccgggc tgttggacgg agatatcatt atcgaattcg
     4321 acggtgtgcc aattcgcact gtgagcgaac ttgtcttgcg cgcccggcgg gcagtgccct
     4381 acagcaccgt aaaagtggtt gtcatccgtg gggctgaaca gctcgagatt cccgtaaagg
     4441 tcggcaagcg cggctaaagc tcagtcggcc ggcttcgcat gctcgcgcat ccgattctcc
     4501 atttcaagcc gcgctgattc tcgatcttct tccgattcat cagcttcaaa agcttcgaac
     4561 agggcaaaag gctgttccgc gatcaagcgc aactcccatg cttcacgccc tgcgtgtgac
     4621 g
//
LOCUS       DATDBY010000079         3123 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1342617, whole genome shotgun sequence.
ACCESSION   DATDBY010000079 DATDBY010000000
VERSION     DATDBY010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3123
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1342617"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..896)
                     /locus_tag="VIT19_01575"
     CDS             complement(<1..896)
                     /locus_tag="VIT19_01575"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY5837692.1"
                     /translation="MSLTVLRSKMKALVVDDDDVIRSNVAEVLITDGWEVCEASSAEQ
                     ALELLDRERWSLVFCDVQLSTDGPHDGYHVLRRFTDEQPTAQIILMTGHGSAVGALDA
                     VSSGAYDYLMKPFEIADVRRISAAVRRNIAKREREHVSDELPPSPTVYTSDIDLVGVS
                     AAFVEVMKLVGRVASTSLPVLITGESGTGKEIVARAIHRRSRRAEQAFIAVNCGAVPA
                     ELIESELFGHVRGSFTGATADRRGLWQEADRGTVFLDEITETSPAFQVKLLRAVQEGE
                     VRRVGSNQTHRLDVRVIAATNR"
     gene            complement(969..1415)
                     /locus_tag="VIT19_01580"
     CDS             complement(969..1415)
                     /locus_tag="VIT19_01580"
                     /inference="COORDINATES: protein motif:HMM:NF013179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEY5837693.1"
                     /translation="MNQPIDTNKEMQASFNDQVVFRLDLDGNILSVNEAGERLTGYSG
                     VELGRLSVLDLLPEQCAADLRAMAKRSVRHRFGTVFEIEVMTRDRRQIPLEVSIDLIR
                     GPDRKLEFLGIAVPKNDAAAGRPRCLDSGFQFKPSKQLNAILHAAW"
     gene            1899..>3123
                     /locus_tag="VIT19_01585"
     CDS             1899..>3123
                     /locus_tag="VIT19_01585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837694.1"
                     /translation="MDWNSSKRSLIALLFVAVLATIGGLPRIAAAEGRTSRDSSTGDI
                     KSSEVEPVAPTYKWNVTAKELPLLGLNEANVAIGFEQSLGFSTAQFDFLIFKALTFDE
                     EHGTYLLPTTSKHSRGHSFIEFVPGSAVNLYVSAEGVELQDRGTTKVLKTPDGTKYLF
                     VRYPDNEFRCAMIRDINGRTLSLLYIANGLLLRGLVDSTGRTVTFNYGRQGIESVTQT
                     WMADSRGFTKTWTVGEEKPVDVSSKFAHAVLTKTGKFLPSNAVVNAYTDSMETSDRIL
                     ARMFGGATAVVGGNGFEPAGLAAPYPLYRGDIVGDDGKIRRGHLSYAMHIYGSPDGTG
                     ASALYVPAGFTSHSAEPSPTDAAVLFYYPRLGNLTDVTLAVFHVADFQIMPEGDRVRI
                     GNLGGRGGSTTLYKHS"
BASE COUNT          674 a          898 c          858 g          693 t
ORIGIN      
        1 tcacggttcg tcgcggcgat tacccgcacg tccaggcgat gggtctggtt cgacccgacg
       61 cggcgcactt cgccttcctg cacagcgcgc aaaagcttca cctgaaaagc cggactggtt
      121 tcggtaatct cgtcgagaaa caccgttccg cgatcggctt cctgccaaag tccgcgacga
      181 tcggccgtgg caccggtaaa cgagccgcgc acatgtccaa acaattccga ctcgatcaac
      241 tccgccggaa ccgcaccgca gttgacggcg atgaatgctt gttcggctcg gcggctacgc
      301 cggtgaattg cgcgcgcgac aatttcttta cccgtgccgg actcgcctgt gatcaagacc
      361 ggaagactgg ttgaggccac ccggccgacc agcttcatta cttccacgaa tgcggcgctg
      421 acacctacca gatcgatgtc ggatgtgtaa acggtgggag acggcggcag ctcgtcactg
      481 acgtgttcac gttcacgttt cgcaatattc cggcggaccg ctgccgagat ccgcctgacg
      541 tcggcaatct cgaacggctt catcaagtag tcgtacgcgc ccgaagaaac ggcgtcgagc
      601 gccccgaccg cggatccgtg tccggtcatc agaatgattt gcgccgtcgg ttgttcgtcg
      661 gtgaacctgc gcagcacgtg atagccatcg tgcgggccgt cggtgctcag ttgcacgtcg
      721 cagaacacaa gcgaccaccg ttcgcgatcc agcagttcca acgcttgttc ggcggaactt
      781 gcctcgcaaa cttcccagcc gtcagtgatt aagacttcgg cgacgttgct tcggatgacg
      841 tcgtcgtcat cgactaccag tgctttcatt tttgaccgca ggacagttaa cgacatttat
      901 cggcctcgtt tgcgattttg tcaaaagggg ttggagctga gacgggaaag ctgtgcgccg
      961 aaaccgatct accacgccgc atgtaagata gcgttcaatt gcttcgacgg tttgaattga
     1021 aaaccactat ccaggcagcg gggacggccg gcggcggcgt cattctttgg cacagcgatt
     1081 cccagaaact cgagctttct gtccggtcct ctaatgaggt cgatactcac ttccaacggg
     1141 atttgccggc ggtccctcgt catcacttcg atttcgaata ccgttccgaa gcggtggcgg
     1201 acgctgcgct tggccatagc acgtaaatcg gccgcgcatt gttcgggaag gagatccagg
     1261 acactcaatc gccccagttc gaccccgctg taaccggtaa ggcgttcacc cgcttcgttg
     1321 acggacagaa tattgccgtc aagatcgagt ctaaaaacaa cctggtcatt gaaacttgcc
     1381 tgcatttctt tgttggtatc gatcggttga ttcattgcca atgtccgcgc atcgcgacgg
     1441 aacaggatcg tttggcagtg gagaagctgc cgagttaacg ccctcactcg tctgtgcaaa
     1501 acgaggttgg tgtggcattc aaccacggcg agatgccgcg gttagtggtg attcgtcaag
     1561 agaatcccaa ttctttcggg attcgctctc tgtgtctgca tcagctatgc cagcaaaaga
     1621 cagctttgag tagcaacacc tccggcggca cattggttgc tccgtgattc aacgcgaagc
     1681 gcaacggaaa gcgcccactg gaatcgcttg agacgacaaa cgcgactctg ccttttgtcg
     1741 gatccatctc aacaagtcgt acctacccca aatcctcatt agttttccaa caagctgacc
     1801 actagttccg aactgaactt cggtcagtcc aaacaacgtc actcgatcgc tcgcatagtg
     1861 gtcgccagcg gacgccaaac ttacacggtg aaacttacat ggactggaat tcatccaagc
     1921 gatctctaat tgcacttctc tttgtcgcgg tcctggcaac gattggcggc ttgccgcgaa
     1981 ttgctgcggc agaaggacgc acgtcgcgcg actcgtcaac gggagatata aagtcttccg
     2041 aagtcgaacc tgtggcgcca acctacaaat ggaacgtcac cgcaaaggaa ctgcccttgt
     2101 tgggactgaa tgaggcgaac gtcgcgatcg gtttcgagca gtcgctgggt ttttccacgg
     2161 cgcagttcga tttcttgatt ttcaaagctc taacttttga cgaagaacac ggcacgtacc
     2221 tgctgcccac gacctcaaaa catagtcgcg gccacagctt catcgaattc gtccccggca
     2281 gcgcggtaaa tctctacgta tctgctgaag gcgtcgagct tcaggatcgt ggcacgacga
     2341 aagtcctgaa gaccccggac ggcaccaagt accttttcgt gcgttatccg gataatgagt
     2401 ttcgctgcgc aatgattcgc gatatcaatg ggcgcacgtt gagtctgctt tacatcgcga
     2461 acggcctgct gttgcgcggc ctggttgact cgactggccg aaccgtcact ttcaattacg
     2521 gccggcaagg aattgaatca gttacgcaaa cctggatggc ggattctcga ggctttacga
     2581 agacgtggac cgtcggtgaa gaaaaaccgg tcgatgtctc atccaaattt gcccacgcgg
     2641 tgttgacgaa aaccggcaag ttcctgcctt caaacgccgt ggtcaacgcg tatacggact
     2701 caatggaaac gtcagaccga attctcgcgc gaatgtttgg cggggcaacg gcagtcgtcg
     2761 gcggaaatgg attcgagccc gcgggactgg cagcccctta tccgctctat cgcggcgata
     2821 tcgtgggaga cgatgggaag attcgtcgcg gccatttgtc gtatgcgatg cacatttacg
     2881 gcagtcccga cggaaccggg gcctcggctt tgtacgtgcc ggccggcttc acctcgcaca
     2941 gcgccgaacc atctccgacc gacgccgcgg tgctgttcta ttatccgcgg ttaggaaatc
     3001 tgacggacgt gacgctggcg gtttttcacg ttgccgattt tcagatcatg cctgagggag
     3061 atcgagttcg gattggaaat ctcggcgggc gcggcggatc gacaacactc tacaagcatt
     3121 cgc
//
LOCUS       DATDBY010000080         2184 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_406799, whole genome shotgun sequence.
ACCESSION   DATDBY010000080 DATDBY010000000
VERSION     DATDBY010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2184
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406799"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..1253
                     /locus_tag="VIT19_01590"
     CDS             186..1253
                     /locus_tag="VIT19_01590"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEY5837695.1"
                     /translation="MKIIARTTPFALTAVILFSACVKGPESTNTGGSAKSGGPVRIGF
                     SMDTLKEERWQRDKALVEQRCKEVGAQCEVQVANGVDADQIKQCENFLTKGVDVLIVA
                     PHNGQIAASIVEAAHQQGVPVISYDRLIRNSDVDLYVSHQVVKIGQMQAQYALDHAPK
                     GNYVLIGGSQTDNNALLLIEGQMQVLKPAIDSGQIKIVTQQYAREWLASEALRITEDA
                     LTKNNNDIQAIVASNDGTAGGAVSALPPQLVGKVLVTGQDAALDAVQRIVEGKQTMTI
                     YKPIQPLAFAAVDAAIKLARGEKVDAKDKINNGKIDVPSLLFEPMVLDKNNVMQTVIK
                     DGYHKLEDVYKNVPRDQWPKP"
     gene            1326..1730
                     /locus_tag="VIT19_01595"
     CDS             1326..1730
                     /locus_tag="VIT19_01595"
                     /inference="COORDINATES: protein motif:HMM:NF017451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEY5837696.1"
                     /translation="MATFKKFEEIEAWRKARELTKRIYTISRTTSFARDFGLKDQIRR
                     ASVSVMSNIAEGYDRSGTGEFIQFLATAKGSAAEVKCQLYVALDQSYIDQATFVELTS
                     LASETGNMIGGLINYLRRSGLKGTKYKTASAQ"
     gene            1738..>2184
                     /locus_tag="VIT19_01600"
     CDS             1738..>2184
                     /locus_tag="VIT19_01600"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY5837697.1"
                     /translation="MLEELETRNSKLETALRMRSITKTFPGVRALDGVSFDLNSGEIH
                     ALVGENGAGKSTLIKILAGVYPHPEYGGEIFLDGAERRFASVRESEQAGIAVIYQEMS
                     LVRDLSVAENIFLGRAPRRFGVINWEELYSRVQKLLDELHLALDPRT"
BASE COUNT          558 a          588 c          606 g          432 t
ORIGIN      
        1 ccggaaaaca gcagcacctc ggccgcggca atcacaaaca gaccaacgta gccgtgccgc
       61 gcgaaccttc cggcacccgc agttcctctg ctgacagttt tcatgttcgt aggtattatg
      121 tggcggcgct ttgcgcgcgg caatcgtaaa ctaccggcac gcagcaacca agaaagggac
      181 agacaatgaa aatcattgcg cggacaactc cgtttgcttt gacggccgtg attctattct
      241 cggcgtgtgt gaaaggcccg gagtcaacca acaccggcgg aagcgccaaa tcgggcggcc
      301 cggtgcgcat cggcttttcg atggacactc tgaaggaaga acggtggcag cgtgacaagg
      361 ctttggtcga gcaacgctgc aaagaggttg gtgcgcaatg tgaagttcaa gtcgctaatg
      421 gcgtcgatgc cgaccaaatc aagcagtgcg agaacttcct gaccaagggc gttgacgttc
      481 tcatcgtcgc gccacacaac ggccaaatcg ccgcgtccat cgtggaagcg gctcatcaac
      541 aaggcgtgcc ggtcatcagt tacgaccgtc tgattcgtaa ttcagacgtg gacctgtacg
      601 tgtcgcacca ggtcgtgaag attgggcaga tgcaggcgca gtacgcgctc gatcatgcgc
      661 cgaaaggcaa ttacgttttg attggcggat cgcaaacaga caacaacgcg ctgcttctga
      721 tcgaaggcca gatgcaagtg ttgaagccgg cgatcgatag cggacagatc aagatcgtga
      781 cccagcaata cgcccgcgag tggttggcga gcgaagcttt gcgtatcacg gaagacgcgc
      841 tgactaaaaa caacaacgac attcaggcaa tcgtggcttc gaacgatgga acggccggag
      901 gcgctgtctc ggccctgccg ccgcaactcg tcggtaaagt cctggtgacg ggtcaggacg
      961 cagcgctcga tgctgtgcaa cgcatcgtcg aaggcaaaca gacgatgacg atctacaaac
     1021 cgattcagcc gctcgctttc gccgctgttg atgcggctat caaactcgcg cgcggcgaga
     1081 aagtcgatgc caaggacaag atcaacaacg gaaagattga cgtgccttcc cttctcttcg
     1141 agccgatggt gctggacaaa aacaatgtga tgcagaccgt gattaaagac ggctatcaca
     1201 aacttgagga cgtttataag aacgtgccgc gcgaccaatg gcctaaaccg taaaaacagt
     1261 ttcgagttcc gagtttcggg tttcgagtta aaagctattc cagctcaata gaaggagaat
     1321 cccacatggc tacattcaag aagttcgaag agattgaggc ttggcgaaaa gcgcgagaac
     1381 tcaccaagcg aatttacaca atctcgcgca ccacctcgtt cgccagagac tttggattga
     1441 aagatcaaat ccggcgcgca tcagtctcgg tcatgtcaaa tatcgcggaa ggatatgaca
     1501 gaagcgggac cggagagttc attcagttcc ttgccactgc aaaaggatct gcagccgagg
     1561 tcaaatgtca gctttacgtc gccctcgatc aaagctacat cgaccaagct acgttcgttg
     1621 agttaacgag tctagcgtcc gaaactggca acatgatcgg cggcctgatc aactatttgc
     1681 gccgatcggg tttaaaaggc acaaagtaca agaccgcatc agcacagtag ggtccgcatg
     1741 ctagaagaac tcgaaactcg aaactcgaaa ctcgaaactg ctttacgaat gcgatcgatt
     1801 acgaagacct tcccgggcgt cagggccctg gacggcgtta gttttgatct aaactccggc
     1861 gaaatccatg cgctcgtcgg tgagaacggc gccggcaaat cgacgctaat caaaattctc
     1921 gccggtgttt atccgcatcc ggagtacggc ggggaaattt ttctcgatgg ggccgaacga
     1981 cgctttgcca gcgtgcgcga atctgagcag gccggcatcg cggttatcta tcaggaaatg
     2041 tcgctggtgc gcgatctcag cgtggcggaa aacatctttc tcggccgcgc cccgcgccgc
     2101 tttggcgtga tcaactggga agagctttac agccgcgtgc aaaagctcct ggacgaactt
     2161 catctcgcgc ttgatccacg cacg
//
LOCUS       DATDBY010000081         3056 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_743008, whole genome shotgun sequence.
ACCESSION   DATDBY010000081 DATDBY010000000
VERSION     DATDBY010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3056
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_743008"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..671)
                     /locus_tag="VIT19_01605"
     CDS             complement(<1..671)
                     /locus_tag="VIT19_01605"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HEY5837698.1"
                     /translation="MLTLDLIKQAAERIAGRVHRTPVMSSRAFNEVAGGEVFFKCENL
                     QRAGAFKARGATNRILSLTDDEKKRGVLAVSSGNHAQAVALAAREAGVRAVVCIPDDA
                     PKMKVAGMRSYGADIRVFDRHKDDRDAFGREIAEREGLVQVPAYDDYLIMAGQGTCGL
                     ELVEEFPDLDCILAPCSGGGLFAGVSTAAKGLNPSIRCFAVEPDTANDTQLSIAKGER
                     VKISPP"
     gene            complement(721..1653)
                     /gene="lipB"
                     /locus_tag="VIT19_01610"
     CDS             complement(721..1653)
                     /gene="lipB"
                     /locus_tag="VIT19_01610"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: protein motif:HMM:NF010925.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEY5837699.1"
                     /translation="MRISAACAAVDVVVVAFLWGVLRRVRVWLNAVMGKSNKQAAAMI
                     TKRFMFPPVVTKTAVRYNRDSTLSMSERRNLRVERLGRVEYGAALDIQKACERAVLAG
                     QQPDTLLLLEHPHVLTMGRRSAPGAIVAPDEVLQARGVTVFETNRGGKATYHGLGQVV
                     GYPIISLSPDRKDVHRFVRDLEEVLIRTMSDFGIETFRIAGLTGVHTARGKVAAIGVH
                     IARWVTTHGFALNVNTDLSYFNLIVACEGEPVTSMKELLGREIDLSEVEDRIAERFAE
                     VFEMDEVSTGSGPGSPRGLPARGGGSDRVLALSI"
     gene            1652..2035
                     /locus_tag="VIT19_01615"
     CDS             1652..2035
                     /locus_tag="VIT19_01615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837700.1"
                     /translation="MAGATKVADQVKILTRFLYLLGGVAKGIEQIDEAAKKNEASPAA
                     LQQNEQNKTTVKTSLRNVREGLDALEIYFRSTPGLQSYYLKLVGSASGAADAEAQAAM
                     GQFDQSGRTLLGVVNRLTDVLLIMR"
     gene            2145..>3056
                     /locus_tag="VIT19_01620"
     CDS             2145..>3056
                     /locus_tag="VIT19_01620"
                     /inference="COORDINATES: protein motif:HMM:NF022646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 domain-containing protein"
                     /protein_id="HEY5837701.1"
                     /translation="METLISSKLLLFIVCLMVAASSSVRAQPTAPSDLSLNQTQASHF
                     ARLALKCVRKEFPQKLDHTMNDASEVRNPKQLHPAFYGCFDWHSTVHGHWMLVHLLKM
                     FPALPEGRQIREALDDNLSAKNIAAEVAYLNQKSRASFERTYGWAWLLKLAEELHGWN
                     DEDGRKWSRNLHPLADAFADRYLAFLPKQNYPIRTGVHPNTAFGLAFALDYARAVGNR
                     KLETLIIERSRTYFGRDVNYPGAWEPGGEDFFSAALMEADLMRRVMKGREFAAWFHRF
                     LPGAARNRPKQLLQPAIVTDRTDPKLVH"
BASE COUNT          656 a          917 c          847 g          636 t
ORIGIN      
        1 ggcggagaga tcttgactcg ctcacccttg gcgatcgata gctgcgtgtc gttcgccgtg
       61 tcgggctcaa ccgcaaagca tctgatggaa ggattcaatc ccttcgccgc cgtgctgact
      121 ccggcaaaca agccgccgcc actgcaaggc gccaggatgc aatccaagtc cggaaattct
      181 tccaccagct caagcccgca tgttccctga ccggccatga tcaaatagtc gtcataggcc
      241 gggacttgaa ctaatccttc gcgttcagcg atttcgcggc caaaggcgtc acggtcgtct
      301 ttgtgccgat cgaagacgcg aatgtcggcg ccatagctgc gcatgccggc taccttcatc
      361 ttcggcgcgt catcgggaat gcaaacgacg gcacgcacac ctgcctcacg tgccgcgagc
      421 gcgaccgcct gtgcgtgatt gcctgaagat acggcgagta cgccccgctt cttttcgtca
      481 tcagtgagcg aaagaattct attggtcgcg ccgcgcgctt tgaacgcacc cgcgcgttgc
      541 aggttttcgc atttgaagaa gacttcgccg cccgcgactt cgttgaaagc gcgtgaagac
      601 atgaccggcg tgcgatgcac acggccggcg attcgttccg cggcttgttt gatcagatcg
      661 agtgtcagca ttttggcagt atgaggtcag taccgggagc ggtagcgacc gggtgttcag
      721 tcatatggat aaagccaaga cccggtcgct accaccaccc cgcgcgggca gcccgcgcgg
      781 ggaccccggt ccgctcccgg tactgacctc atccatctcg aagacctccg cgaatcgttc
      841 cgcaatgcga tcttccactt cgctcaaatc tatttcgcgc cccagcaatt ctttcattga
      901 agtcaccggc tcgccttcac acgcgacgat caaattgaag tagctcaaat cagtattcac
      961 gttcagcgcg aagccgtgcg tagtcaccca gcgggcgatg tgcacgccga tggccgcgac
     1021 cttcccgcgc gcggtatgca ctccggttaa gcccgcaatc cgaaacgttt caatgccaaa
     1081 gtcgctcatc gtgcgaatta gaacctcttc caaatcgcgc acgaagcgat gcacgtcttt
     1141 gcggtccgga ctcaggctga tgatcggata tccgacgacc tggcccagcc cgtgataggt
     1201 cgctttaccg ccgcggtttg tttcaaagac tgtgacgccg cgcgcctgca acacttcatc
     1261 cggagcgacg atcgcacccg gcgctgaacg ccgccccatc gtcagcacat gcggatgctc
     1321 gagcaaaagc agcgtgtccg gctgttggcc ggccaacact gcgcgctcgc aagctttctg
     1381 aatatccagc gctgcgccgt attcgacgcg gcccaaacgt tcaactctca gatttcgccg
     1441 ttcgctcatg gacagagtag aatcgcgatt gtaccgcacc gcagttttag tgacgaccgg
     1501 aggaaacatg aatcgttttg taatcatcgc cgctgcctgt ttgttactct tacccattac
     1561 cgcgttcagc caaacgcgaa cgcgccggag cactccccag aggaaagcaa ccacgacaac
     1621 gtcgaccgcc gcgcaggctg cggaaatccg catggcgggt gcgacgaaag tcgccgatca
     1681 ggtgaagatt ctcactcggt tcctttactt gcttggcggt gtagcaaagg gcatcgagca
     1741 gatcgatgaa gcggcgaaga agaacgaagc ctcgcccgcg gctcttcagc agaacgagca
     1801 gaacaaaaca actgtgaaga ccagtctacg caacgtgcgt gaaggtctcg atgcgttgga
     1861 aatttacttt cggagcacgc ccggattgca aagctactat ctgaaactcg tcggttcagc
     1921 ttccggtgct gccgatgcag aggcccaggc ggccatggga cagttcgatc aatcggggcg
     1981 cacactgctc ggagtcgtca accgtttgac agacgttctc ttaatcatgc gctaagggtt
     2041 tcccctctcc gcaagcggag aggggttagg ggagaggtgg gccgtcgctt gaccccaccc
     2101 cttaatcccc tccccacttg tggggagggg aaatgagaac tcacttggaa acattaatct
     2161 cctcaaaact tctgcttttc atagtctgct tgatggtggc agcttcgagt tctgttcgcg
     2221 cccaaccaac ggcgccgagt gatctctcgc tgaaccaaac acaagcttcg catttcgcgc
     2281 gtctcgcgtt gaagtgtgtc cgcaaggagt ttccgcaaaa gctcgatcac acgatgaacg
     2341 atgcgtcaga ggtgcgcaat ccaaagcaac tgcacccggc gttctatggt tgctttgatt
     2401 ggcattcaac ggtgcacggc cactggatgc tcgtacattt gctgaagatg tttccggccc
     2461 ttccggaagg gcgtcagatt cgcgaggctc tggacgacaa cctgagtgcg aagaacatcg
     2521 cggccgaagt cgcttacctg aatcaaaaaa gccgcgcctc gttcgaacgg acttacggat
     2581 gggcctggct tctgaaactc gctgaagagt tgcatggctg gaacgacgaa gacggtcgaa
     2641 agtggtcaag gaatcttcat cccctggccg atgcctttgc cgacagatac ctggcgtttc
     2701 tcccaaagca gaattatcca attcgcacgg gcgtgcatcc gaacacggcg ttcggtctcg
     2761 cgttcgctct cgactatgcg cgggcggtgg gaaatcgaaa gttggaaacg ctgatcattg
     2821 agcgcagccg cacgtacttt ggacgcgacg taaattatcc gggtgcctgg gagccgggcg
     2881 gcgaagactt cttttccgcg gcgctgatgg aagccgactt aatgcggcgc gtaatgaagg
     2941 gaagggaatt cgccgcgtgg tttcatcgct ttctgccggg cgccgcgcgc aatcgaccga
     3001 aacagcttct gcaacccgca atcgtcaccg accgcactga cccaaagctt gtgcat
//
LOCUS       DATDBY010000082         3064 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2576180, whole genome shotgun sequence.
ACCESSION   DATDBY010000082 DATDBY010000000
VERSION     DATDBY010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2576180"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..381
                     /locus_tag="VIT19_01625"
     CDS             <1..381
                     /locus_tag="VIT19_01625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837702.1"
                     /translation="EPANLSRTIITNIYLNALEAETLSVFEGNEIRKNRYYFDFEGRR
                     FSIDMFLGDLLGLMLAETDFETDEEMLRFELPPFAIADVTNNEIFSGGKLCELTFEDI
                     EREAQKSGWVKTHSADSNGAVARP"
     gene            399..1532
                     /locus_tag="VIT19_01630"
     CDS             399..1532
                     /locus_tag="VIT19_01630"
                     /inference="COORDINATES: protein motif:HMM:NF025115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3298 and DUF4163 domain-containing protein"
                     /protein_id="HEY5837703.1"
                     /translation="MRIKIQLILFLATAITLLGACRKSTPKQNANSNAGPSAQETLGG
                     GAAPAGEKINLRGSIANLSIEMNLVREGERLTGTYFYPRVGKNIDLKGEIDRDGNVAL
                     RESDETGKETGVFKGKWKSNATGLADIEGKWSRPDGSKETDFFISQQPIEFTVAVRIV
                     PKVIRENSKEAKYSVDAEYPQIEGDARFDKFNAAARAMITKDVAAFKTAETAALEEET
                     DLPDETQTSSLDIGYQVRLATDDLISVEFTEGQYSRGAAHGNSITAVLNYDVKNGKRI
                     ELADLFNPKSNHLSVISAYAIKDLKEQSKQNDMLMEDQLQDGAAPRADNYRAWTITRK
                     GLWITFDPYQVAAYAAGPQHVLVPYSALKPIVKADGPIGNLAG"
     gene            complement(1622..2482)
                     /gene="rsmI"
                     /locus_tag="VIT19_01635"
     CDS             complement(1622..2482)
                     /gene="rsmI"
                     /locus_tag="VIT19_01635"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: protein motif:HMM:TIGR00096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEY5837704.1"
                     /translation="MPGELFIVATPIGNLEDITQRALRVLREVDLIACEDTRHTRKLL
                     NHFSIDKKTISYHEHNERERAEELCDLIESGKNVALVSDAGTPLINDPGYRIVTAAIE
                     RGIRVIPVPGPVAFIAALAASGLPTDEFFFGGFLPARAHPRRARLEELRSVRATLAFY
                     EAPHRIVAALKDAAEALGNRRAVVARELTKLHEEFVRGTLNELVEQFSRVGTARGEMV
                     LIISGEAIESSPANPEQTNTERLVERVNELEREGMNSKDALKSAARELGIKRAEAYRM
                     MTAQKNRRTK"
     gene            complement(2579..>3064)
                     /locus_tag="VIT19_01640"
     CDS             complement(2579..>3064)
                     /locus_tag="VIT19_01640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837705.1"
                     /translation="VASAQGWPDYRRDRDNGRYDSRYLRDSIHRLDRLAKDFERDLDR
                     NLDRSRADGTRREDRLNGEARQFRNAAGNLKSSFGNGRDLSRSRDEAQRVLSEASRLD
                     RVMNRMNTQASHRWSEIRRELNVISNAYGIGYNGSNDDWRRGRQDNRNDIPWWERIIR
                     P"
BASE COUNT          679 a          839 c          881 g          665 t
ORIGIN      
        1 gaaccggcga atctttcccg caccatcatc acaaacattt acttgaatgc cctcgaagct
       61 gagacgctgt cggtattcga agggaacgag attcggaaga accggtacta tttcgacttt
      121 gaaggccggc gcttttcgat cgacatgttt ctcggcgatt tgttgggttt gatgctggca
      181 gaaacggatt tcgaaacgga tgaagagatg ctccggtttg aactgccgcc gtttgccatc
      241 gctgacgtta cgaacaacga aatattttcc ggcggaaaat tgtgcgagct cacgtttgaa
      301 gacatcgagc gggaagcgca aaaaagcgga tgggtgaaga ctcactccgc cgactccaac
      361 ggggcagtag cccgaccgta agggagggct tattagacat gcgaatcaaa atccaactga
      421 tcctttttct cgcgaccgca atcacgcttt tgggcgcgtg ccgtaaatca acgccgaaac
      481 aaaacgccaa cagtaacgca gggccttcgg cgcaggagac tttgggtggc ggcgctgcgc
      541 cggcgggtga gaagatcaat ttgcgcggct cgatcgcgaa cttgtcgatc gaaatgaatc
      601 tggtccgcga aggcgagcgt ctgactggga cgtacttcta tccgcgagtt ggaaagaaca
      661 ttgatttgaa aggtgaaatc gaccgcgacg gcaacgtcgc tctccgcgag tccgatgaaa
      721 cggggaaaga aaccggcgtc ttcaaaggca aatggaaatc gaatgcgacc ggtttggcgg
      781 acattgaggg caaatggtcg cgtcctgatg gttcgaaaga gactgacttt ttcatatcgc
      841 agcaaccaat tgaattcacc gtcgcggtcc gaatcgtgcc gaaagtgatt cgcgaaaaca
      901 gcaaagaagc aaaatactca gtggatgccg agtatcctca gatagaaggc gacgcacggt
      961 tcgataagtt caatgcggcg gcgcgcgcga tgatcaccaa agacgttgcg gctttcaaaa
     1021 ctgccgagac tgctgcgctc gaggaggaga cggatcttcc ggacgaaaca cagacttctt
     1081 cactggacat tggataccag gttcgactgg caactgatga cttgatcagt gtcgagttta
     1141 ccgaagggca atactcgcgc ggcgcggcgc atggcaacag catcacggcc gtgctgaact
     1201 acgatgtgaa gaacggtaag cgaattgagc tggcggatct gttcaatccg aaatcgaacc
     1261 atctcagcgt gatatctgct tacgcgatca aggatctgaa agagcagagt aagcagaacg
     1321 acatgctcat ggaggaccag ctacaggacg gggccgcccc gcgcgcggac aattacagag
     1381 cgtggacgat cacccgtaag ggtctctgga ttactttcga tccgtatcag gtggcggctt
     1441 acgcggccgg gccgcagcat gttttagttc cgtattcggc gttgaagccg atcgtgaagg
     1501 ctgatgggcc gattggaaat ctggccgggt aatgggtacg cacgcatctg ccgtgcggcg
     1561 ggtacgcagg cctcaggtct gctgcacgcc agaggcgtgc gtacctattg agcctcttgt
     1621 tctatttcgt gcggcggttc ttctgagccg tcatcatccg ataagcttca gcgcgtttga
     1681 ttcccagctc gcgcgcagcg cttttcaaag cgtccttcga attcatacct tcgcgttcga
     1741 gttcattcac ccgttcgacc agtcgttcag tgtttgtttg ttccgggttt gccggcgaac
     1801 tctcgatagc ttcgccggaa atgatcagca ccatctcgcc gcgcgccgta cccaccctcg
     1861 aaaactgttc aaccaattca tttagagtgc cgcggacgaa ttcttcgtga agcttcgtta
     1921 gttcgcgcgc gactacggcg cggcggttac cgagcgcttc tgccgcatct ttcagcgccg
     1981 ccacgattcg atgcggagct tcataaaaag ccagtgtcgc gcgcaccgag cgcaattctt
     2041 ccaacctcgc ccgccgcgga tgcgcacggg ccggtagaaa accgccgaag aaaaactcat
     2101 cggtgggcag gccggaagcc gccaacgccg cgatgaatgc caccgggccg ggaaccggta
     2161 ttacgcgaat accgcgttcg attgccgcgg tcacaattcg gtatcccggg tcgttaatca
     2221 aaggcgtgcc ggcgtcggaa accagggcga cgttctttcc cgattcaatc aggtcacaaa
     2281 gttcttcggc gcgttcacgc tcgttgtgct cgtgatagct gatggttttc ttgtcgatgc
     2341 tgaaatggtt caggagcttt cgcgtgtgtc gtgtgtcctc gcaagcgatt agatcaactt
     2401 cacggagcac gcggagggcg cgctgggtga tgtcttcgag attgccgatg ggcgtcgcga
     2461 cgatgaacag ttctccgggc acgcgggcta ttctgtcatc gcgcgctgaa aaggcgaaag
     2521 ccctgctcga cgaatcgagc aaggctctcg cagagtgacg aattgctccg ccagttagtt
     2581 atggtctgat gatgcgctcc caccacggaa tgtcgttgcg gttgtcctgc cgaccacgac
     2641 gccaatcgtc gttggagccg ttatacccga tgccgtaggc attcgagatc acgttcagct
     2701 cgcggcggat ttcagaccag cgatgactcg cctgcgtgtt catgcggttc atgacgcgat
     2761 ccagccggct ggcttcactc agcactcgct gcgcttcgtc gcgactgcgg ctgaggtcac
     2821 gcccatttcc aaaactggac tttaggttgc cagccgcatt gcggaactga cgggcctcgc
     2881 cattcaacct gtcttcgcgg cgcgtaccat cggcccggct gcgatccaaa ttgcgatcga
     2941 ggtctctctc gaaatccttt gcgagtcgat ccaggcgatg aatactatcg cgcagatacc
     3001 gactgtcgta acgcccgtta tcacggtcac gccgataatc cggccagcct tgcgctgaag
     3061 ccac
//
LOCUS       DATDBY010000083         4014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1432068, whole genome shotgun sequence.
ACCESSION   DATDBY010000083 DATDBY010000000
VERSION     DATDBY010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4014
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1432068"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1998
                     /locus_tag="VIT19_01645"
     CDS             <1..1998
                     /locus_tag="VIT19_01645"
                     /inference="COORDINATES: protein motif:HMM:NF036870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LodA/GoxA family CTQ-dependent oxidase"
                     /protein_id="HEY5837706.1"
                     /translation="DDTGRLLVLGGHGNSGSFLYDDFGQPRINDYANNDGWFDDTSDG
                     PVMARLAMYSPLVDRIRYIDVEFPAWVVCAYPAYVPEILDVVTMDDVIEDMAIRKFAE
                     RTDVYGASGTFDNPQHISPTDEGALIHWRAGRLQWNDNYKPWFYRDIWTILYRPDQYN
                     YLCDALGQSNFPHNQSTRGTFDYEKLGLPPVVDRRAVEACEAKCIKDHHSGELFVEEL
                     AAELTPLETSVGEAAGTSVTERRLLTDNRAGKLRKLIAKFARGVASKHPTEQVADYLE
                     TWLPAVDAASDTKEELKREVDQIVGADSDYPEHVADLFSKRVHEHLQKYLSGQLLRRC
                     LKRCIRANTYDPYGPMRRFLFDLLRAPGEENQFMIMGRPDSRVHNLPRMPLLCGDNPI
                     TNTLVSKFFRLTDHQFYLLRQWAYGAFYNEKLEGWADPDPLHPYAGWVNNTGRQLDRG
                     VISNILGGSFCPGAEIGWVMRNPSVWVEPYRLKADPDFYVFGQTPAQANKGTLPDSNY
                     AFYAGDDLSQDNDFKVGLQPGDFTKYMSVPWQADFNECSTQTIDVTYEKWNVIYPDSD
                     NDKLMDREQRTWETLWWPAHRPMQTYEQVVPGDPSSINWLDWTPGIPQTNAGDLKMVT
                     EWWRLPVVKRNPQGDIEPSTLGTPSDNSAMPYISVERTKRK"
     gene            2111..2557
                     /locus_tag="VIT19_01650"
     CDS             2111..2557
                     /locus_tag="VIT19_01650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837707.1"
                     /translation="MSDNPFVGSWAYRSFSNDPDLSKDSDITNLLLFGDGTLTITAPS
                     SDTLGGTIGGSLGPGKGNWLLNLHGSIGYGAPAQVRFQGVGLVNGEEWIYDYIGWLVP
                     VWPNSNDTLQRAAFVGSVVRTIPHSGSDGTVHPAGVVASFYAVRIS"
     gene            2570..3676
                     /locus_tag="VIT19_01655"
     CDS             2570..3676
                     /locus_tag="VIT19_01655"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5837708.1"
                     /translation="MSEPSYDVAIIGGGPAGAATAISLRQHAPALSVLLIEASRYDTH
                     RIGETLPPLTRSLLEHLHLWKDFGNLGAREVFATNAIWGAAKPVSNEFFLAPANTGWH
                     VERVAFDAMLADAAQRRGAELRSGSAVRSLDWSGRDWKLSLADGATIGARFIVDATGG
                     SAVFARRLGARITAVDRLIGITKFFQSNSKEPGVLVEAFEHGWWYTAGLPNGKRITGC
                     ITDADLARQMRLGESEEWLRRLAATSHVGAFTAGSDPGSPLIIRSTATQLLKPLVTER
                     WLAVGDAAARFDPLSSQGVLKALRSGIFASYAIGDWLTRDDDAGLRRYDRFVNDEFKS
                     YSAARAKYYREEQRWPDSEFWARRHQPLLKSAAA"
     gene            complement(3684..>4014)
                     /locus_tag="VIT19_01660"
     CDS             complement(3684..>4014)
                     /locus_tag="VIT19_01660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837709.1"
                     /translation="TSVCTGAAVLANSGVLDGKPAATNHAAFAWVTSFGPHVLWDNVS
                     RWVDAGHYVTSAGVSAGTDMAFHLVDRLMGRAVAETSVRQAEYDWHRDPQQPIYYPQG
                     AVVPTSR"
BASE COUNT          829 a         1155 c         1186 g          844 t
ORIGIN      
        1 gatgacactg gccggctgct ggtgttgggt ggccatggaa actcgggctc gttcctgtat
       61 gacgacttcg ggcagccgcg catcaacgat tacgcgaaca atgacggctg gttcgatgac
      121 acgtcggacg gtccggtgat ggcgcgtttg gcgatgtatt ctccgctcgt cgatcgcatt
      181 cgctacatcg acgtcgaatt cccggcttgg gtcgtgtgcg cgtacccggc ttatgtgcct
      241 gagattctcg acgtcgtcac catggatgac gtcattgaag acatggcgat tcgaaagttt
      301 gccgagcgca ccgatgtata cggcgcctcc ggcacgttcg acaacccaca gcacatttca
      361 ccgaccgacg aaggcgcgtt gattcactgg cgcgccgggc gcttgcagtg gaacgataat
      421 tacaagccct ggttctatcg cgacatttgg accatcctgt atcgtcccga tcagtacaac
      481 tatctttgtg acgcgctcgg acaatcgaac tttccccaca atcaatcaac ccgcggcact
      541 ttcgattatg aaaagttagg tttgccgccg gtagttgatc gacgggccgt cgaagcgtgc
      601 gaggcaaagt gcatcaagga tcaccactca ggcgagctgt ttgtcgagga actcgccgct
      661 gaactaactc cgctcgaaac ttccgtgggc gaagcggccg gcacctcagt taccgagcgt
      721 cgcttgctca ctgacaaccg cgccggcaaa ttgcggaagc ttattgcgaa gttcgcgcgc
      781 ggggtggcca gcaaacatcc cacggaacag gttgcggatt acctggagac atggctaccg
      841 gcggtcgacg cggcctctga tacaaaagaa gaactgaagc gcgaagtgga tcaaatcgtc
      901 ggggccgatt ctgactatcc cgagcatgtc gctgatttgt tttcgaagcg cgtgcacgaa
      961 cacctgcaaa aatacctgtc gggacaattg ctgcggcgat gtctcaagcg gtgcattagg
     1021 gccaatacct acgatcccta tgggccaatg cgtcgtttcc ttttcgatct gctgcgggcg
     1081 ccgggagaag agaaccagtt catgatcatg ggccggcccg acagccgggt tcacaatctg
     1141 ccgcgcatgc cactgttgtg cggcgataac ccgatcacca acacgctggt ctcgaaattc
     1201 ttccggctca ccgatcatca gttttacctg ctgcggcaat gggcctatgg cgctttctac
     1261 aacgagaagc tcgaaggttg ggccgatccc gatcccttgc atccttacgc gggctgggtg
     1321 aataacaccg gacgccagct cgaccgcggc gtgattagca atattctcgg cggatcgttt
     1381 tgtcccggtg cggagattgg ctgggtgatg cggaatcctt ccgtttgggt cgaaccgtat
     1441 cgccttaaag ccgacccgga tttctatgtt tttggacaga ccccggcgca ggccaacaaa
     1501 ggcacgttgc cggacagcaa ttacgctttt tatgccggcg acgatctcag ccaggacaat
     1561 gattttaaag ttggtcttca acctggcgac tttaccaagt acatgtcggt gccctggcag
     1621 gcagacttta acgaatgctc tacgcaaacc atcgatgtga cgtacgaaaa gtggaacgtc
     1681 atctatcccg atagcgacaa cgacaagttg atggatcgcg aacaaagaac ctgggagacg
     1741 ctttggtggc ccgcccatcg gccgatgcaa acctacgagc aggtcgtacc gggcgatccg
     1801 tcgtcgatca attggcttga ttggactccc gggattcccc aaaccaacgc cggcgatctc
     1861 aagatggtaa ctgagtggtg gcgactgccg gtggtgaagc gcaatccgca aggcgacatc
     1921 gagccgagca ccctgggaac accgagtgat aattcggcca tgccttacat cagtgtcgag
     1981 cggactaagc gaaagtgagt ttagaggcgg gttattgtgc ccacccatga cgatcgaaac
     2041 cgtgcggaac tgaatttaga cgcgggctga tgctcgccaa tcattcgtca atccattaga
     2101 aggagaactc atgagtgata acccttttgt tggcagttgg gcctatcgaa gtttttccaa
     2161 cgatccggat ttgtccaagg attccgatat cacgaacctg ttgctgttcg gcgacggcac
     2221 tctaacgatc accgcgccat cttctgacac gctcggcgga accatcggcg gcagtctcgg
     2281 tcccggcaag ggaaactggt tactgaatct gcacggctcg atcggttacg gcgcgcctgc
     2341 gcaagtccgc tttcagggtg tcggactggt taacggcgaa gaatggattt atgactacat
     2401 cggctggctg gttccggttt ggcccaacag caacgatacg ttgcagcgcg cggccttcgt
     2461 cggttcagtg gttcgcacga tcccgcattc gggcagcgat ggcacggtgc atccggcggg
     2521 ggtagtcgcg tctttctacg cagtgcggat ttcatagccg gggccggcct tgagcgaacc
     2581 atcctacgac gtcgcgatca ttggtggcgg accagccggc gcggcgaccg ccatttccct
     2641 tcggcagcac gcgccagcgc tctcagtgtt gttgatcgag gcgtcgcgct acgacacgca
     2701 tcgcattggc gagaccctgc cgccgctcac gcgttcactc ctggagcatc ttcatctttg
     2761 gaaggatttc ggcaatcttg gcgcgcgtga agtctttgcg acgaacgcca tttggggggc
     2821 cgcaaaaccg gtcagcaacg agtttttcct ggcgccggca aataccggtt ggcacgtcga
     2881 gcgcgtcgcg ttcgatgcga tgctggccga cgcagcccaa cgtcgcggcg ccgaattgcg
     2941 aagcggatcg gccgtgcgct cattggattg gtccggccgc gactggaagc tgagcctggc
     3001 tgacggcgca acgattggcg cgcgctttat cgttgatgcc accggcggct cggctgtctt
     3061 tgcgcgacgg ttgggtgcgc gaattacggc cgtggaccgg ctcatcggca tcacgaaatt
     3121 ctttcaaagc aacagcaaag aacccggcgt cctggtcgag gctttcgaac acggctggtg
     3181 gtacacggcc gggctgccca acggaaagcg cattaccggc tgcataaccg acgcggattt
     3241 agcgcgccaa atgagactcg gcgaaagtga agaatggctg cgaagactgg ccgcgacttc
     3301 acatgtgggg gcgttcacgg cgggtagcga tcccggtagc ccgcttatca ttcgctctac
     3361 cgcgacgcag ttgcttaaac cgctggtcac cgaacgttgg ctggcggtgg gcgatgcggc
     3421 cgcgcgtttc gatccacttt catcgcaggg agttttgaag gctttgcgat ccggaatctt
     3481 cgcgtcgtac gcgatcggtg attggcttac gcgagacgat gatgcgggcc tgcggcgata
     3541 cgaccgcttc gtgaatgacg aattcaaaag ctattccgcc gcccgcgcaa aatactatcg
     3601 cgaggagcaa cgttggccgg atagtgagtt ttgggcgcgg cgtcaccagc cgctgttgaa
     3661 aagcgcggcc gcttgagctt cacttatcgc gaagtcggca ccacggcccc ttgcggatag
     3721 tagatcggct gttgcggatc gcgatgccaa tcatattcag cctgcctcac cgaggtctct
     3781 gccaccgcgc gacccatcaa tcgatcgacc aaatgaaaag ccatgtcggt tcccgcagaa
     3841 acccctgccg aggtgacgta gtgaccggca tccacccagc gcgatacgtt gtcccaaagc
     3901 acgtgcggac cgaacgacgt cacccacgcg aacgcggcgt gatttgtcgc agccggcttc
     3961 ccgtctaaga cacccgagtt tgccagtacc gccgcgccgg tgcagacgga agtc
//
LOCUS       DATDBY010000084         5494 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1557493, whole genome shotgun sequence.
ACCESSION   DATDBY010000084 DATDBY010000000
VERSION     DATDBY010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5494
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1557493"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2912)
                     /locus_tag="VIT19_01665"
     CDS             complement(<1..2912)
                     /locus_tag="VIT19_01665"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5837710.1"
                     /translation="MSVAPGTKIGRYEIRSKLGQGGMGEVYLAEDTRLRRNVALKILP
                     VDVATDRVRMERFVQEAKAASALNHPNIITIYEIDQTESGHFIAIEYIDGQTLRQRAA
                     NSSMTVGDVLDIAIQATSALAEAHEAGIVHRDIKPDNIMIRRDGIVKVLDFGLAKLSE
                     QPSPVYVDSEAPTSINIKTEPGVVMGTAVYMSPEQARGVPVDARSDIFSLGIVLYEII
                     AGRLPFKGSDRVEVLMAILGDAQPPPLARYAPEAPDELQRIVAKALAKPREDRYQSTN
                     DLLTDLRNLKKRLELDAELQRTLPPAGVPPAQRTAELPAALKTETPGTVTSIIPPEPS
                     ASSGAGRRLQKRTVLITAGLAALAVTLGLLWYFKSDSAAPLTEEDTIVVADFINTTGD
                     PVFDGTLKQALGSQLEQSPFLSIFSDTRVREALRLMDRSPDERVTKEIARQICQRQGF
                     KAFLAGSISNIGSHYVVTLEATNAQTGDTIALEQAEADSKEQVLAALGTAATNLRKQL
                     GESLASIQKYDKPIHQATTSSLEALKYYSTGIEQQLKGRYLDAIPSFKKATEIDQNFA
                     RAYAAMSSMYYNTRQYELAAEASRKAYELRDRVGENERLYITQAYYDNVTGELDKYLQ
                     TLEQWKSTYPRDASPANNLAVKYNELGLFDKAAAEAREAIRLNPGSTSGYSLLAAAQL
                     ALNRIDDAKQTISQAQGQKLDSTAMRRTLFRIAFIQHDSVTMQQQIDWLSGKPDDFLA
                     QGWQSETAAFLGQLKKSQEFSDSALESAERRDQKDVAAQIAVAAAARDALFGDCARLK
                     EQTAKALALTNRQVTIANAANALSSCPDASGSTQAQNLIAELTRRSPADTVLNKILAP
                     LVQARMELQRDNAAQAIQLLETTRPFEGYALFQIAYLRGQAYLKQQKGAEAAAEFQKI
                     LDHRGPQPTSPIYVVAHLGLARAAALQGDMAKARKAYQDFFALWKDADANVALLIEA"
     gene            complement(3055..4572)
                     /locus_tag="VIT19_01670"
     CDS             complement(3055..4572)
                     /locus_tag="VIT19_01670"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY5837711.1"
                     /translation="MKRTSVLSILILVVAASAVAQNKVENFDKYAEAARQEWKVPGMT
                     ITVVQDGKVILAKGYGVREMGKASAVDADTLFGAMSTTKAMTAVTMGMLVDEGKVSWD
                     DKVIKHLPEFRVADAYVTSELRIRDLFTHTGGMGNADFLWAWTPELTAAEIVKRMQYA
                     RPAYPFRGGYTYQNVMYAVAGQVIEKVSGMAWERFANERLFAPLGMKNTFATYGASSN
                     YQNRTAAHFDIDGTITVIPEQTADPIAPAGAVWSTANDIAKWIDFMLGNTTVNGKQLL
                     KPATHQALLWPQVIVPPGQFYPTVALTKPHWTTYGLGWFQHDYRGEMVNFHTGSLAGR
                     TAIIGLIPDKKMGIYIFGNVDQMQVRHALMYKAFDVFAFGDGNGRDWSKEMKTLYDGL
                     DAQSKRQAAAQQARRKSDTKPSHALKAYVGKYADPFYGEIEISITNDKLRLSIGKGET
                     RSADLEHWHHEVFRTVWHRRWLGEGLVSFQLNSVSGEVEAITISGAQLRRVARAN"
     gene            complement(4751..>5494)
                     /locus_tag="VIT19_01675"
     CDS             complement(4751..>5494)
                     /locus_tag="VIT19_01675"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY5837712.1"
                     /translation="PMNREWPARADSTLKESYPPDHIEEHVHRSLKNADLQSLDLIQF
                     HTWNDEWLRDDRWFYKLDDLRSQKLISAIGISINRWEPWNGIRAVRTGQIDAVQVIYN
                     IFDQNPEDELFPACEEMNVAVIARVPFDEGTLTGTLTKDSRWPEGDWRNTYFVPENLI
                     ASVDRAEAIKETLRGWNQEHATRITMPELALRFILSHPTVSTIIPGMRKLSHVEANLA
                     ASDAGPLPGELYEQLRPHRWVRKPAPWSQ"
BASE COUNT         1070 a         1606 c         1516 g         1302 t
ORIGIN      
        1 gcttcgatca gcagggccac gttcgcgtcc gcgtctttcc acagcgcgaa gaaatcctga
       61 taagccttgc gcgccttagc catgtcgcct tgcagtgcag cggcgcgggc caggcccagg
      121 tgcgcgacca cgtagatcgg agaagtaggt tgcgggccgc gatggtcgag aatcttctga
      181 aactccgctg cggcctccgc tcccttttgc tgtttcaggt atgcctggcc gcgtaggtag
      241 gcaatctgga aaagtgcgta gccttcaaag ggccgggtgg tttccagcaa ttggatcgcc
      301 tgcgccgcat tgtcgcgctg caattccatt cgcgcttgaa ccagcggcgc caaaatcttg
      361 ttcagaaccg tgtcggccgg agaacgcctg gtcagttccg caataaggtt ttgtgcctgg
      421 gtggaccccg atgcatcggg gcagctggac agtgcattag ccgcattggc gatggtcact
      481 tgcctgttcg tgagggccag cgcctttgct gtctgctctt tcagccgcgc gcaatcacca
      541 aacagggcgt cgcgcgccgc ggccgctacc gcaatctgtg cggcaacgtc tttctgatcg
      601 cgacgttcgg ccgattccag agcgctgtca gaaaactctt gtgacttttt cagttggccc
      661 aggaacgccg ctgtctctga ttgccaccct tgcgcaagaa agtcgtccgg ttttccgctc
      721 aaccagtcga tctgttgctg catcgtcacg ctatcgtgct ggataaaagc aatccggaag
      781 agggtccggc gcatcgcggt actatccagc ttttgtccct gcgcctgact aatagtttgc
      841 ttggcgtcgt caatgcgatt gagagctaat tgcgccgccg ccaaaagcga ataacctgag
      901 gtcgatcctg gattgagacg aatcgcttca cgtgcctcag cggccgcctt atcgaataaa
      961 ccaagctcgt tgtatttaac cgccaggttg tttgccggtg acgcatcacg cggataggtg
     1021 ctcttccact gttcaagcgt ttgcaggtac ttgtccagct cgcccgtaac gttgtcgtaa
     1081 taggcctgag tgatataaag cctttcattc tcaccgaccc gatcgcgcag ttcgtacgct
     1141 ttgcgcgagg cctcagccgc aagctcgtac tgccgcgtgt tgtaatacat ggacgacatc
     1201 gcagcgtagg cgcgggcgaa gttctgatcg atctccgtcg cttttttgaa ggaaggaatg
     1261 gcgtcgaggt aacggccctt gagctgctgc tcgatcccgg ttgaatagta tttaagagcc
     1321 tcgagcgatg acgtcgtcgc ctgatggatc ggcttgtcgt acttctgaat tgacgctaac
     1381 gattcgccca gttgcttgcg caggttggtg gcggccgttc ccagcgccgc cagcacttgc
     1441 tctttgctgt cggcctcagc ttgttccaac gcgatcgtgt cgccggtttg cgcattcgtg
     1501 gcttcaagcg tgacaacata atgacttccg atgttggaga tcgagccggc gagaaacgct
     1561 ttgaatcctt gccgctggca aatctggcgc gcgatctctt tcgtcacccg ttcatccggc
     1621 gagcgatcca tcagacgcag cgcttcccgc acacgagtgt ctgagaagat gctcaggaaa
     1681 ggtgactgct caagttgcga acccaatgct tgcttgagcg ttccatcgaa caccggatcg
     1741 ccggttgtgt tgatgaaatc ggcaaccacg atcgtgtctt cttcagtcag gggagcagcc
     1801 gaatccgatt tgaagtacca gagcaaaccc aacgtaacgg ccaaagccgc gaggcctgcg
     1861 gtaatcaaga cagtgcgttt ttgaagtctc cttccagcgc cactactcgc gctcggctcc
     1921 ggaggaatga ttgaggtgac ggttccaggt gtttctgtct tgagagccgc cggcaactcg
     1981 gctgtgcgct gtgctggtgg gacccctgcg ggcggcaacg tgcgctgtaa ctctgcgtcc
     2041 agctcgagcc gctttttcaa attccgcagg tcggtcagca aatcattcgt ggactgatac
     2101 cgatcctcgc gcggtttcgc gagcgcctta gccacgattc gctgcagctc gtccggcgct
     2161 tcgggcgcgt accgcgccag cggcggcggt tgcgcatctc ccaggatcgc catcagaact
     2221 tcgactcgat ccgaaccttt gaatggcaag cgcccggcta tgatctcgta aagcacgatg
     2281 ccgagactaa agatgtccga ccgcgcatct accggcacac cgcgcgcttg ttcaggcgac
     2341 atgtaaacgg ccgttcccat gacgacgccg ggttcagtct tgatattgat cgaggtgggc
     2401 gcttcgctgt ccacataaac cggggacggc tgctcagaaa gtttcgcgag gccaaagtcg
     2461 aggactttca cgatgccatc gcgccggatc atgatgttgt cgggtttgat gtcgcgatgg
     2521 acaatgccgg cttcgtgagc ttcggcgagg gcactcgtcg cctggatcgc gatatcgagc
     2581 acgtcgccaa ccgtcatact tgagttcgcc gcgcgttggc gcagggtctg tccatcgatg
     2641 tactcgatgg cgatgaaatg gcccgattca gtctggtcga tttcgtagat cgtgatgatg
     2701 tttggatgat tcagcgccga cgccgccttc gcctcttgca cgaaccgctc catgcgaacg
     2761 cgatccgtcg cgacatcgac gggcaaaatc ttcaaggcca cgttccggcg caggcgcgtg
     2821 tcttcggcga gataaacttc gcccatgccg ccctgcccaa gctttgagcg gatttcgtaa
     2881 cgaccgattt tcgtgcctgg ggcaacactc atcagtaaac ccttgccgtc cccgcctggc
     2941 gtcttggcgg gtgaatatta cagctttgtt tggaatttag gtgagcgaat ttcaaataat
     3001 acgacggtca gggctgaaag gcctgagtga gctttcaaac cctggtgccg cgatctagtt
     3061 tgcccgcgca acgcgcctta actgagcgcc gctgatggtt atcgcctcta cttcacccga
     3121 tacggaattc aattggaatg ataccaatcc ttcaccgagc cagcgccgat gccatacggt
     3181 ccgaaaaact tcgtgatgcc agtgttcaag atcggcgctg cgggtttcgc ctttgccgat
     3241 acttaaccgg agcttgtcgt tggtgatgct gatctcaatc tcgccataga acggatcggc
     3301 atacttgccc acgtaagcct tgagcgcgtg gctcggcttt gtgtctgact tgcggcgggc
     3361 ctgctgggcg gccgcttgcc ttttgctctg cgcgtctaag ccgtcgtaaa gcgtcttcat
     3421 ctctttcgac caatcacggc cgttgccatc gccaaacgcg aacacatcga acgccttgta
     3481 catcagcgca tgacgcactt gcatttgatc aacgtttccg aagatgtaga tgcccatttt
     3541 cttgtccggt atcaggccga tgatcgcggt tcgcccggcg aggcttcccg tgtgaaaatt
     3601 caccatctcg ccgcgatagt cgtgctgaaa ccagccgagg ccatacgtcg tccagtgcgg
     3661 tttagtcagc gcgacggttg ggtagaattg tccgggcggc acgatcacct gcggccacag
     3721 aagcgcttga tgggtcgcag gcttgagcag ttgtttcccg ttgacggtcg tatttccgag
     3781 catgaagtcg atccatttgg cgatgtcgtt ggcggtggac cagacggccc ccgccggcgc
     3841 gatcgggtca gccgtttgtt cagggatcac cgtgatcgtg ccgtcgatat caaagtgggc
     3901 agccgtgcgg ttttgatagt tgctcgacgc gccgtacgtc gcaaatgtgt tcttcattcc
     3961 caaaggtgcg aacagccgct cgttcgcgaa ccgctcccac gccattccgc tcaccttttc
     4021 gatcacctga ccggcgacgg cgtacatgac attctgatat gtgtaaccgc cgcgaaacgg
     4081 atacgccggc cgcgcgtact gcattcgctt cacgatctcg gccgcagtca attccggagt
     4141 ccacgcccac aagaaatcgg cgttgcccat tccgccggtg tgagtaaaaa ggtcgcggat
     4201 cctcagttcg gacgtcacat atgcatcggc aacgcgaaac tccggcagat gcttgatcac
     4261 cttgtcgtcc caggagacct tgccttcgtc aacgagcatt cccatcgtca ccgcggtcat
     4321 cgccttagtc gtggacatcg cgccaaaaag cgtgtcggca tcgaccgccg aagccttccc
     4381 catctcgcgc acaccgtagc cctttgccag gatcaccttg ccgtcctgca cgaccgtgat
     4441 cgtcattccc ggcactttcc attcctggcg tgctgcttcg gcgtatttat caaaattctc
     4501 gaccttgttt tgggcgaccg cagacgcagc cacgaccagg atcagaatgc tcaagacact
     4561 tgttcttttc ataagttatc tattcaaaca gattccgaat taacgatgca aaatcgctgg
     4621 tctttgcgaa gcccatcgta ctcgtagcca accttaataa agctcatcgt ttcaaatcgg
     4681 ccgagattct aacggactgg atggggtgaa accagtcaat tctgcggacc cggttctgtg
     4741 tttagctttt ttattgcgac cagggcgcag gtttgcgcac ccaccgatgc ggccgtaact
     4801 gttcatacaa ttccccgggc aaaggaccgg catcgctcgc cgcaaggtta gcttcgacgt
     4861 gagatagctt gcgcatgccg ggaatgatcg tgctgacagt cggatgcgaa agaataaagc
     4921 gcagcgccag ttcaggcatc gtgattctcg tcgcgtgttc ctggttccag ccgcgcaagg
     4981 tttcttttat cgcttcggct cgatcaacgc tcgcgatcaa gttctcaggc acgaaatatg
     5041 tgttgcgcca atcgccttcg ggccagcggc tgtctttggt cagcgtgccg gtcaacgttc
     5101 cttcatcaaa cggcacgcgc gcaatcacgg cgacattcat ctcttcacac gcgggaaaca
     5161 actcgtcttc gggattctga tcgaagatgt tgtaaatgac ctggaccgca tcgatctgcc
     5221 cggttcgcac tgcacgtatc ccattccatg gctcccagcg attgatactg attccgatcg
     5281 cgctgatcag tttctggctg cgcaagtcat ccagtttgta gaaccaacga tcgtcgcgca
     5341 gccactcgtc attccaggta tggaactgga tcaaatccaa gctttgcaga tcagcattct
     5401 tcagactgcg gtgaacgtgt tcttcgatgt gatcgggcgg gtaagattcc ttaagcgtcg
     5461 aatccgcgcg cgccggccac tctcgattca tcgg
//
LOCUS       DATDBY010000085         6896 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_563019, whole genome shotgun sequence.
ACCESSION   DATDBY010000085 DATDBY010000000
VERSION     DATDBY010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6896
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_563019"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..754)
                     /locus_tag="VIT19_01680"
     CDS             complement(158..754)
                     /locus_tag="VIT19_01680"
                     /inference="COORDINATES: protein motif:HMM:NF019934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspG"
                     /protein_id="HEY5837713.1"
                     /translation="MLSTRNLAFSLAILIAASLSLFAFQTRAAGDLTPKEARKVIARL
                     AGIELPSDAVRIKSISPMGNSAVVVAQVETAFRLVNDKDKWRVAEIRTGDRRWEDMDL
                     LVRALNAEKTSRVRAELETIATALEAFRRESGSYVEAKTEAALVDFLSPRYLARVIRL
                     DAWHRPYEYEGSRESYVLRSLGPDGKSGTSDDVVLTKG"
     gene            complement(949..1350)
                     /locus_tag="VIT19_01685"
     CDS             complement(949..1350)
                     /locus_tag="VIT19_01685"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5837714.1"
                     /translation="MSTPDKISKGRVLVADDDPAILRLVSTILEKEGFSVVAARDGRE
                     AYKTLQADADFTAAVFDVVMPHISGPELVRHMRTENRFKRIPVMMMTAEQDPKLSSDS
                     FAAGAVVFLPKPFTTTQLQTMLRMLVSKAGK"
     gene            complement(1390..2451)
                     /gene="pdxA"
                     /locus_tag="VIT19_01690"
     CDS             complement(1390..2451)
                     /gene="pdxA"
                     /locus_tag="VIT19_01690"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: protein motif:HMM:TIGR00557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEY5837715.1"
                     /translation="MTASRAESLHATGKSKPRIGITMGDPSGIGPEVVLKAVAEEEVR
                     DVCHPIIIGNAEVLAHNARTLDLQCGYEIVRQGERLPQKPKAPVIFHLDNLNGFVEPG
                     IESGIAGKAAASYIEAAVNLCAAGEIDAMSTAPINKRALFLGGYSFPGHTEFLASLTG
                     TEEYAMGFVAANLRIVLLSTHVPLAEAIRLVRRERIEKTIRLADRELHRWGVERARIA
                     VAALNPHGAEGGLFGIEEASEMAPAIESCRVVDGINVRGPFSADTVYLRASRGEFDAV
                     IACYHDQAMIPVKCLSFGEAVNVTLGLPFIRTSVDHGTAFDIAGKGLAEHSSMVAAIK
                     LAAELSLQAGESSRAVEAA"
     gene            complement(2471..2920)
                     /locus_tag="VIT19_01695"
     CDS             complement(2471..2920)
                     /locus_tag="VIT19_01695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837716.1"
                     /translation="MNRKLIRTTLADVKARRDVVPQQNRMPEQGQRPGGMPQQRPGQQ
                     PSMQMRKRQPPATETHAEIYYYKKQIDAHTPMVLVLQDGEEIEGTIEWYDRAALKINR
                     RSAPNLLVLKRNIKYMFKAEERHGKVESDARADQHAPDHATEPAFEN"
     gene            complement(3159..4334)
                     /gene="ftsZ"
                     /locus_tag="VIT19_01700"
     CDS             complement(3159..4334)
                     /gene="ftsZ"
                     /locus_tag="VIT19_01700"
                     /inference="COORDINATES: protein motif:HMM:TIGR00065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEY5837717.1"
                     /translation="MSAEVNQTHNSASPSGRSINIFIDDEPPITGARIKVIGVGGGGG
                     NAVQRMIDAGIEGIEFVVANTDLQALKRSSAPVKIQLGGRLTKGLGAGADPEVGRQAA
                     LEDTDKIIEVLEGSDMVFVTTGLGGGTGTGGAPIVASLATELGALTVAVVTKPFLFEG
                     RRRLQQAEQGLRELHESVDTVITIPNERLFAAVSQTASIGEAFKAADDVLRQAVQGIS
                     DLITVPGFINLDFADVRTVMQGMGMALMGTGYARGENRAIEATQEAIASPLLEEASIK
                     GAKGVLINITGGPDLTLYEVNEAATLVRQEADEDANIIFGHVIDETMADAMKITVIAT
                     GFNRKPMTAAVGAGSTMPVTASPRYDVPTPDFGVTPSGSRARSEDLDVPTFIRKKAD"
     gene            complement(4468..5733)
                     /gene="ftsA"
                     /locus_tag="VIT19_01705"
     CDS             complement(4468..5733)
                     /gene="ftsA"
                     /locus_tag="VIT19_01705"
                     /inference="COORDINATES: protein motif:HMM:TIGR01174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEY5837718.1"
                     /translation="MAKRSTHTIGLDIGTSRVTCIVAATGEDGRLNVVGTGESDSRGL
                     RKGVIVNPEAAVESIRRAVEEAERMSGAEAQEVTINLAGSHIMGFNGQAIVAVASREH
                     EITTDDVRRAIDSACAIQLPAGREIVDRLPQEFIVDDQDGINDPIGMTGARLAVKVHI
                     VTSPVTARQNAINAVNRAGLIVADMILEQLAAAEATLTDDDKEYGSALVDIGAETTGL
                     CVYQRGAVQHTAVFPLGGSHFTNDIAFGLRTPIPEAEKIKRTVGCASSASLSDAMRGE
                     MVEVPSVGGRAPRQLSRQILCDILQPRAEEVLMHVADEIKDSGWSRQLSSGVVLTGGG
                     ALLDGMVEIAEQVFDAPVRIGYPERDRFGGLVEDIQSPAWAAAAGLALVSQRAHAVEQ
                     RSGTAKRGGSGRLTHFVSKFRDRFSSSIF"
     gene            complement(5726..6808)
                     /locus_tag="VIT19_01710"
     CDS             complement(5726..6808)
                     /locus_tag="VIT19_01710"
                     /inference="COORDINATES: protein motif:HMM:NF015739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HEY5837719.1"
                     /translation="MKEQVIASRAPRRGNAQAKGLPQRPMRRDGRTVESDRFSMRSLY
                     AYVPRALKVAVVILGIIGLAIGYRAASSAALFQARAVDVVGTSRTSAEEIESLVRRSV
                     SRTGVWRADLSALSVELGRLPGVRRAVITRVLPDGLRVRITERVPVAVVRTAAGHFVS
                     VDDEGVALGEMKSDQMPPFFIRGWNEDGTNEARQENSERVKKYQEALREWQTAGVAER
                     VSEISLFDVHDVRAQLAGKDSDIEVRLGSRELGRRLKEALDVLDEYKQTPRGSSITYA
                     DYQGDHVLLGFSSGAKVSAGSDDNAGEPSDVAANAGAAATAATRNAEPGEKPVDKKPR
                     VGAQSTAPKPTASPRSAKRPTANRNG"
BASE COUNT         1347 a         2153 c         1886 g         1510 t
ORIGIN      
        1 gcaatcgaat cgtcggcgag tagtagcttt cttccggtta tcaaggttgg agcccttcga
       61 tcgacattca cgcggtcggg gttaccgctc gtttgaacct agcattcgcg tgaaaacggc
      121 gtcaagaggt ttatgcgccc agccctcaaa atcagcgcta tcccttggtc aggacgacgt
      181 catcggaggt cccggatttt ccgtcgggcc ccaaagatcg cagcacatac gactcgcgac
      241 tgccctcgta ttcatagggc cgatgccagg cgtccaggcg aattacgcgc gccaggtaac
      301 ggggactcag aaaatcgacc agagcagctt cggtcttcgc ttcgacgtaa gagccacttt
      361 cgcggcggaa tgcctcaagc gctgtggcga tagtttccag ttccgcacgc acccgagaag
      421 tcttttcagc gttcaatgcg cggacgagca aatccatgtc ttcccaacga cgatcgcccg
      481 tccgaatttc ggcaacgcgc cacttgtctt tgtcgttgac caggcgaaat gccgtttcga
      541 cctgcgcaac gaccactgcc gagttgccca ttggagaaat actcttgatg cgcaccgcgt
      601 ccgacggcag ttcaattcca gcgagccgcg cgattacttt gcgcgcttcc tttggcgtca
      661 gatcgccggc ggcgcgggtc tgaaaagcga ataaactcag gctggcagcg atcaatatcg
      721 ccaacgaaaa cgccagattg cgggtcgaca acatgagtga acctcctgat tgggcttcgc
      781 cgcgtagcgg cgaaatgttt atagcccacg cggcttttga cgactacctt cttacgaatt
      841 gagctaatcg cgccaccggc gtgattagct caattcgcga acctaagatc agactcgcgc
      901 agcgataaac atttggcgtc taccgcgccg gggccgaaac ctgctccctc acttgccggc
      961 cttgctgaca agcatccgca gcatcgtctg caactgagtc gtcgtaaacg gtttgggcag
     1021 aaaaacgact gcgcctgcgg caaagctgtc tgacgaaagt ttcggatcct gttctgccgt
     1081 catcatcatt accggaatcc gcttgaagcg gttttcagtg cgcatatgtc ggaccagctc
     1141 cggacctgag atgtgcggca ttacaacatc gaacacggcg gcagtgaaat ccgcgtcggc
     1201 ttgcagagtt ttgtaagcct cgcgcccatc gcgtgccgct accaccgaaa aaccttcctt
     1261 ctccagaatg gtgcttacca gacgcagaat tgcgggatcg tcgtcggcga cgagaacgcg
     1321 gccttttgaa attttgtcgg gtgtgctcat cttaattcgg cgggtacgcc cgcctaaact
     1381 atctgctgac tacgctgctt cgacggctcg actactttcg cctgcctgca aggacaattc
     1441 cgccgccaac ttgatcgcgg ccaccatgct cgaatgctct gccaggcctt taccggcgat
     1501 gtcgaacgcc gtgccatgat cgactgaagt acgaataaac ggcaagccca gcgtcacgtt
     1561 gaccgcctcg ccgaatgaca aacacttcac cgggatcatg gcctggtcat gatagcacgc
     1621 gataaccgcg tcgaactctc cgcgcgacgc gcgcaggtaa actgtgtccg cggaaaaggg
     1681 cccgcgcacg ttaatgccgt caacgacgcg gcaactttca atcgccggcg ccatttcgga
     1741 agcttcttca atcccgaaca ggccgccctc tgccccgtgt gggttcagcg ccgccacggc
     1801 gatacgcgca cgttcgactc cccatcgatg cagttcgcgg tcggccagtc taatcgtctt
     1861 ctcgattcgt tcgcgacgca cgaggcgaat ggcttccgcc aacggaacat gcgtggacaa
     1921 caacactatg cggagattcg ccgccacgaa tcccattgcg tattcttcgg tgccggttag
     1981 tgaggccagg aattctgtgt gtccgggaaa gctgtagcct ccgagaaaca gcgcacgctt
     2041 gttgatgggc gcggttgaca tggcgtcaat ctcacccgcc gcacacagat tcacggctgc
     2101 ttcgatgtaa ctagcagccg cctttccggc aatacccgat tcgattccgg gctcaacaaa
     2161 accattcaga ttatcgagat gaaagataac cggcgctttc ggtttctgag gcagccgctc
     2221 gccttgcctg actatttcat agccacactg caaatccagc gtccgcgcgt tatgcgcgag
     2281 cacctcagca ttaccaatga tgatgggatg gcaaacgtcg cggacttctt cttccgccac
     2341 tgccttgagg acaacctcgg gtccgattcc cgaagggtcg cccatggtga taccgatgcg
     2401 aggcttcgac tttcctgtcg cgtgaagtga ttcggcccgc gaagcggtca tgtctggatg
     2461 aaagcggact ttaattttcg aacgcgggtt cggtcgcgtg gtcgggcgcg tgctgatcag
     2521 cgcgagcgtc tgattcaacc ttaccgtgac gttcttcagc cttgaacatg tatttaatat
     2581 tgcgttttaa aaccagaaga ttcggagccg accgacggtt aatcttcaat gcagcgcgat
     2641 cgtaccactc gatcgtgcct tcgatttcct caccgtcttg gagcaccaaa accatgggcg
     2701 tgtgcgcgtc gatctgtttc ttgtagtaat aaatctcagc atgagtttcc gtcgccggcg
     2761 gctgacgctt gcgcatctgc atggacggtt gctgtcccgg tctttgctgg ggcattccgc
     2821 ccgggcgttg accttgctcc ggcattcgat tctgctgcgg aacaacatcg cgcctggcct
     2881 tcacgtctgc cagcgtcgtt ctgataagtt tgcgattcac aattcgcctc caaattatat
     2941 ttcgagagag cgcgagcgcg ctcggaataa atgcgttccc gccagtcgaa acgtggcgcg
     3001 gcttcagcct ttatcaggct ttagccttcc gaggagagtg cgcattgacc cgttacggaa
     3061 tttcgttagg gattgcgcgc atgctacacg acagcggggg aaaacgcaaa atgcactggt
     3121 ggtgcggatg ttgtgcggcg aattagctgg cctcagccct aatcagcttt ctttcggatg
     3181 aacgtcggaa cgtccagatc ctcacttctc gctcttgatc ctgatggcgt cacaccgaag
     3241 tcgggtgtcg gcacatcgta acgcggcgac gcggtcaccg gcatcgtcga acccgcgccg
     3301 acggccgccg tcatcggttt ccgattgaag ccggtcgcaa tcacggtgat cttcatcgca
     3361 tcagccatcg tctcatcaat gacgtgacca aagatgatgt tggcgtcttc atcggcttcc
     3421 tgacggacga gggtcgcggc ttcgttcact tcgtagagcg tcagatccgg accgccggtg
     3481 atgttgatga gcacgccctt cgcgcccttg atcgatgcct cttcgagcag cggcgaggcg
     3541 atagcttcct gcgtcgcctc aatcgcgcga ttctcgccgc gcgcgtaacc cgtacccatc
     3601 agcgccatgc ccatcccctg catgacggtg cgcacgtccg cgaaatcgag gttaatgaag
     3661 cccgggacgg taatgagatc gctgatgcct tgcacggctt gtctcaacac gtcgtcggct
     3721 gctttaaaag cttcgccaat cgaagcagtt tgcgagaccg ccgcgaacaa tcgctcgttt
     3781 ggaatggtga tcacggtgtc gaccgattca tgcagctcac gcagtccctg ttctgcctgc
     3841 tgcaaccggc ggcgcccttc gaacaggaac ggtttcgtaa cgaccgcgac ggtcaaagcg
     3901 cccagttcgg tcgccaacga cgcgacaatt ggggcaccgc cagtgcccgt cccgccgcca
     3961 agacccgtcg tgacgaaaac catgtcagag ccttcaagca cttcaatgat cttgtccgtg
     4021 tcttccagcg cggcctgccg tcccacttca ggatcggccc ctgcaccgag gcctttcgta
     4081 agccgtccgc ccaactgaat ctttaccggg gcgctcgaac gcttgagcgc ttgcaagtct
     4141 gtattggcaa cgacgaactc gatgccttca atgcctgcgt caatcatccg ttgcactgca
     4201 ttgccgccgc cgccgcccac gccgataact ttgatccgag cgccggtgat gggcggctcg
     4261 tcgtcgatga agatgttaat gctcctgccg gatggcgaag ccgaattgtg agtttgattt
     4321 acctctgctg acatgcttgc ttcctctctt ccaaatcggg aaggcttcca cggcctcttt
     4381 cgtctatttt gggttggctg cggcacggga ctcaagattt tgcggacaac atcttgtgct
     4441 aacggggccg cagcatacaa taactagtca gaaaatacta ctactaaatc gatcgcgaaa
     4501 cttagaaacg aaatgcgtca gacgtccgct tccaccacgc ttcgcggtgc ctgagcgttg
     4561 ctcgactgcg tgcgcgcgtt gcgaaacgag cgcgagacca gccgccgctg cccaagccgg
     4621 actttgaatg tcttcgacaa gtccgccaaa ccgatcacgc tcgggataac cgatgcgcac
     4681 cggcgcatca aagacctgtt cagcaatctc aaccatgccg tcgagcaagg cgccgccgcc
     4741 ggtcagcact acgccgctgg acaattgacg actccatcct gagtctttga tctcgtcggc
     4801 gacgtgcatc aaaacttctt cagcgcgcgg ttgcaggatg tcgcaaagaa tctgccgcga
     4861 aagttgccgc ggcgcgcgac cgcccaccga cggcacttca accatctcgc cgcgcatcgc
     4921 atcgctgagc gacgcactgg aagcacagcc gacggtccgc ttgatcttct ctgcctcggg
     4981 aatcggcgtc cgcagaccga atgcgatatc gttcgtaaag tgcgagccac cgagcggaaa
     5041 cacggccgta tgctgcacgg cgccgcgctg atacacgcac aaaccggtgg tttccgcgcc
     5101 gatgtccacg agcgctgaac catattcttt gtcgtcatcc gtcagcgtgg cctcagccgc
     5161 ggccagttgc tcaagaatca tgtcggcaac aattagtccc gctcgattca ccgcgtttat
     5221 cgcgttctgg cgcgcggtca cggggctggt gacgatgtgg accttcactg ccagacgggc
     5281 tcccgtcatg ccgatcgggt cgttgattcc gtcctggtca tcgacgataa attcctgcgg
     5341 cagccgatcg acgatctcgc ggccggcggg cagttggatc gcgcaagccg agtcaattgc
     5401 ccggcgtacg tcgtcggtgg tgatttcatg ctcgcggctg gcgacggcga caattgcctg
     5461 gccgttgaag cccatgatgt gcgagcccgc caggttaatg gtcacttcct gcgcttcggc
     5521 gccgctcatg cgctcggcct cttccaccgc gcgacggatt gattcgacag cagcctcggg
     5581 gtttacgatt acgcccttgc gcaagccgcg cgaatcagat tcgccggttc cgacaacatt
     5641 cagccggccg tcttcacccg tcgcggcgac gatgcacgtc acgcggctgg ttccaatgtc
     5701 gagcccgatt gtgtgggttg atcgtttagc cattcctgtt tgcagttggt cgtttcgctg
     5761 aacgtggtga cgcagtcggt ttcggagctg tactctgcgc gcccactcga ggcttcttgt
     5821 ctacgggctt ttcgcctggc tcagcattcc tcgtcgctgc cgtcgcggcc gcacccgcgt
     5881 tcgcggcgac gtcgctcggc tcacccgcgt tgtcgtccga cccggctgac acttttgcgc
     5941 cggagctgaa tcccaacaag acgtgatcgc cctgataatc ggcgtaggtg atggacgagc
     6001 cgcgtggcgt ctgcttgtac tcgtcgagca cgtcgagcgc ctccttcaag cgtcgtccaa
     6061 gttcccgcga acctagtcgt acttcgatgt ccgaatcctt accggccagt tgcgcccgca
     6121 cgtcgtgcac atcaaacaag ctaatttcgc tcacgcgttc ggctactccg gctgtttgcc
     6181 attcacgtaa tgcttcctga tatttcttca cgcgttcaga gttttcctga cgcgcttcgt
     6241 tcgtgccgtc ttcgttccaa ccgcggatga agaacggcgg catctgatcg ctcttcatct
     6301 cgcccaacgc gacgccttcg tcatccaccg aaacgaaatg ccccgccgcg gtgcgcacca
     6361 cggcgaccgg cacgcgttca gtgatgcgca cccgcaagcc gtccggaagc acgcgcgtaa
     6421 tgaccgcgcg gcgcacaccg ggcaaccgtc caagttcgac gcttaacgct gacaaatcag
     6481 cccgccaaac acccgtgcga gacacgctgc gtcgcacgag actctcgatc tcttcggcag
     6541 aagttctcga cgtgccgacg acatccacgg cgcgcgcctg gaacagcgcc gcagatgacg
     6601 cggcgcgata gccaatcgcc agaccgatga tcccaaggat gacgactgcg accttcagcg
     6661 ctcgcgggac atacgcgtag agcgaccgca tcgaaaatct gtcggactca acggtgcggc
     6721 cgtcgcgccg cattggccgt tgcggtaatc ccttggcctg tgcgtttccg cgtcgtggtg
     6781 cgcgtgatgc gatgacttgt tctttcatgg attcttgcct ttagaagttt cttccgatcc
     6841 cgtcgctacc gctccgggtt ctgacacgga actccacagc tcaacttcga attcga
//
LOCUS       DATDBY010000086         3183 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2345216, whole genome shotgun sequence.
ACCESSION   DATDBY010000086 DATDBY010000000
VERSION     DATDBY010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3183
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2345216"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            189..1298
                     /locus_tag="VIT19_01715"
     CDS             189..1298
                     /locus_tag="VIT19_01715"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY5837720.1"
                     /translation="MGQNLGRTCFDAGSGSSCLEYKTWGQNIDSRINQQAVGYGYIII
                     NNGLAMETKAFGKARTAPDAPETAMTVDLRMNAASVTKTMTAVAALKLLAAKNVSVTS
                     SISPYLPSGWTLGTGVSAITFAELLTHTSGIRTPANTDNSYASLKTVMGQNITTKAAQ
                     YDNNNFAIFRIIFTYLNGFNDTGQTDAAIATATDAGYLAHMKSVYEPDIKIACKPGSN
                     PVFSYPYPQNSAAGTDWGDWTSQCGGGGLQLSVTDMGVFMARLMAGIYLPKTSNNANQ
                     VTLPQMVSNAYGWDVTWPNTHGTCVMKNGNLGGGNPFVPTLATLFVYCSDTGLGFVGL
                     ANSTLPTMSTRNYGFAGGLDDIVFQAYNASWQPGP"
     gene            complement(1383..>3183)
                     /locus_tag="VIT19_01720"
     CDS             complement(1383..>3183)
                     /locus_tag="VIT19_01720"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5837721.1"
                     /translation="VLSSVELAQKNPVSLGEALDHELGVAKRSFGPAPSRPVIRGFDG
                     DRVLVLEDGMRVGALGSQSGDHSEPVDLLSVDRVEVVKGPATLLYGSNAIGGVVNAID
                     GHESPHKGVNGYLTTLGSTNSWQAGGSAGIEAGTDKLLFWANGGAQKANSYLTPLGRI
                     TNSYARGGNVSAGFGFYPGRGFFSANYHFDKRRYGIPFDPTNPDAEAVYLTPRRHSIQ
                     FNGGFRGLKSFIENAKFSIQYTDYTHSEIDAETDAVNTTFSNKSTIFRGTFDQQKRSR
                     LTGSFGVWGMHRNYESAGAEALAPPTKQNSFAVFALETIKFEHAALQFGGRVENNRYR
                     PSLDPVRGQLPDRSFTGFSGAIGLRVSTWNGGAFVMNYSHSYRAPSLDELYNEGPHPG
                     NATFEIGNLDLTRELGNGLDFGLRHSSKRIRAEANGFFYHIDNFVFLAPTGNFQDGLI
                     ESVYSQGVSRFTGFEGRLDTELHKNVWLNLGADYVNAKLIDTNTPLPRIPPLRGRVGV
                     EFRYKGLTIKPEALFANAQENLFPTETRTAGYGLFNVGGSYLIARQHSAHIISFNAFN
                     LGDRLYRNHLSFIKEFAPEIGRGLRVTYTVRFF"
BASE COUNT          733 a          874 c          885 g          691 t
ORIGIN      
        1 tgtaattcac tcctaaagcg cttgcctcat ccacttttca gtgatattac ccgtgcgaag
       61 ttcgacccgc accaaactca caggaggctt ctttcatgca aaatgcgtcc acgcgcaaac
      121 agagagcacg cgctgcgtta gccttggcta tgttcgttgg agcgataatc gcgtgtgatt
      181 ggaataaggt gggccaaaat cttggccgca cgtgcttcga cgcagggtct gggtcatctt
      241 gtcttgaata taagacgtgg ggtcagaaca tcgacagcag aattaaccag caggccgtag
      301 ggtatggcta catcatcatt aacaatggac tggctatgga gaccaaagcc tttggcaagg
      361 cacgcaccgc gcccgatgca cctgaaacgg cgatgacggt ggatctgcgg atgaatgccg
      421 ccagcgtcac gaagacgatg acggcagtcg ccgcgcttaa gcttctggcg gcgaagaacg
      481 tgagcgtgac cagttccatc tcgccttatc tgccgagtgg ttggactttg ggaacgggag
      541 tcagcgcgat cactttcgcg gaactgctaa ctcacaccag cggcataaga acccctgcaa
      601 ataccgacaa cagctacgcc agtctcaaga cggtcatggg ccagaacatc accaccaagg
      661 ccgctcaata cgataacaac aactttgcga tctttcgcat catctttacg tatctcaacg
      721 gtttcaatga taccggccag acggatgcgg ctatcgccac agcgaccgac gcgggttacc
      781 tcgcccacat gaaaagtgtc tacgaacctg acattaagat cgcgtgtaag ccgggaagca
      841 atccggtgtt ctcttatcct tacccgcaaa actcggcggc gggtactgac tggggtgact
      901 ggaccagcca gtgcggcgga ggtgggttgc aactctcggt cactgacatg ggcgttttca
      961 tggcgcggct aatggctggc atatatctgc cgaagacttc gaataacgcg aaccaggtca
     1021 ctctccccca aatggtgagc aatgcgtatg gatgggacgt gacgtggccg aacacgcacg
     1081 gaacctgtgt catgaagaac gggaatctgg gcggtgggaa tccgttcgta cccacgttgg
     1141 ccactttgtt cgtgtactgt tccgacaccg gattaggctt cgtcggcctc gctaattcga
     1201 cgctgccaac catgtccacc cgtaattacg gattcgccgg agggctggat gacatcgtct
     1261 ttcaagctta caacgcttcg tggcagccag gaccgtgagc agacgatgcg caacaaaatg
     1321 agaagcgccc ggtctgggtt cattcagacc gagcgcttct ctcttttgaa ggtgacggtc
     1381 ggttaaaaga atctcaccgt ataggtcacg cgaagtccgc gacctatctc tggcgcaaac
     1441 tctttaatga atgacaggtg atttcggtac aagcgatcgc cgaggttgaa ggcgttgaaa
     1501 gaaatgatgt gcgcgctgtg ctggcgcgca atcagatacg aacccccaac attgaacaga
     1561 ccgtagccgg ccgtccttgt ctcagtcgga aacagatttt cctgggcgtt ggcaaacagc
     1621 gcttccggtt taatcgtcag gcctttgtaa cgaaactcaa cgccgacgcg tccgcggagc
     1681 ggtggaattc gtggcagtgg ggtgtttgta tcaatgagtt ttgcattgac gtaatcagcg
     1741 ccaagattca gccagacgtt cttgtgcagc tcggtgtcca ggcgaccctc gaagccggtg
     1801 aatcgcgaaa cgccctgact gtacacggac tcgatcaaac cgtcctgaaa gtttcctgtc
     1861 ggcgcgagga agacgaagtt gtcgatatga tagaagaagc cgttcgcttc ggcgcggatg
     1921 cgtttcgatg aatgacgcaa accgaaatca agtccgttgc cgagttcgcg cgtcagatcc
     1981 aggttgccga tctcaaacgt tgcattaccc ggatgcggac cttcgttgta gagttcgtcc
     2041 aaagacggcg cgcgatacga atgcgagtag ttcatgacga acgccccgcc attccaggtg
     2101 ctcacgcgca gaccgatggc gcccgagaac cctgtgaagc tgcgatccgg cagttgaccg
     2161 cggaccggat ctaatgaagg ccggtaccgg ttgttttcga cgcgtccgcc aaattgcagc
     2221 gcggcatgct caaacttgat cgtttcgagc gcgaaaacgg caaacgaatt ttgcttcgtg
     2281 ggcggggcca gcgcttctgc gccggcggat tcatagttcc ggtgcatgcc ccaaacgccg
     2341 aagctcccgg ttaaacgact gcgcttctgc tgatcgaacg tgccacggaa gatcgtcgac
     2401 ttgtttgaaa aagtggtgtt gacggcatcg gtttccgcat caatctctga gtgggtgtag
     2461 tcggtgtact gaatggaaaa ttttgcgttt tctatgaacg acttcaagcc gcgaaagccg
     2521 ccgttgaatt gaatgctatg acggcgcgga gttagataga ccgcttcagc gtctggattt
     2581 gtcggatcga aaggaatccc atagcgccgc ttgtcaaaat ggtaattggc gctgaagaaa
     2641 ccacgaccgg gataaaaacc aaatccggcg ctgacgttgc cacctctcgc atacgagttc
     2701 gtaattcttc cgagtggcgt cagatagctg ttggcctttt gcgcaccgcc attcgcccag
     2761 aacagcaact tgtcggtgcc ggcttcgatg cccgcgctgc ctccggcctg ccaactgttc
     2821 gtgctgccga gcgtcgtcaa atacccgtta actcctttgt gcggtgattc gtgtccatcg
     2881 atagcgttca ccacgccccc aatggcgttg ctgccgtaaa gcaacgtcgc cggacctttc
     2941 accacttcga cgcgatcgac cgaaagcaga tccacaggtt ctgaatgatc gccggattga
     3001 gatccgagcg cgccgacgcg cataccgtct tcaagcacca acacgcgatc accgtcgaag
     3061 ccgcgaatga ccgggcgtga cggcgccggc ccgaaggaac gtttagcaac accaagctcg
     3121 tgatcgaggg cttcgccaag actgacagga ttcttttgtg cgagttcgac tgagctaagc
     3181 act
//
LOCUS       DATDBY010000087         2246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_329829, whole genome shotgun sequence.
ACCESSION   DATDBY010000087 DATDBY010000000
VERSION     DATDBY010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329829"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..449)
                     /gene="greA"
                     /locus_tag="VIT19_01725"
     CDS             complement(<1..449)
                     /gene="greA"
                     /locus_tag="VIT19_01725"
                     /inference="COORDINATES: protein motif:HMM:TIGR01462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0006354 - DNA-templated transcription
                     elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEY5837722.1"
                     /translation="MSTDVKQRLQGELDQLESELFVHLPKEIKRAREFGDLRENSEYQ
                     TALQRQTMVKARIRELRQRLSEVASIDLSKISHDKVGYGSVVVLYDGEREEEVTYRLV
                     TPEESDPTAGLISTVSPVGRSLMGKEEGDEVTVTTPAGSRTFEIKSL"
     gene            complement(525..1061)
                     /locus_tag="VIT19_01730"
     CDS             complement(525..1061)
                     /locus_tag="VIT19_01730"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY5837723.1"
                     /translation="MASSPVANTNPPRSTTRIIPAGPVVLSQEIRDTKVKTLDGGSLK
                     LSDYDNKVVVVNIWATWCGPCRQEMPDLVKLNQEYKSRGVVVLGLATTYNERDDPEHV
                     KQFIKAQNVDYKILWDDGALAGPLVQSVNGRSVIPQSFVISRDGKIVKHFSGFNALST
                     PTLMRQAVEEALNDKSKA"
     gene            complement(1231..1791)
                     /locus_tag="VIT19_01735"
     CDS             complement(1231..1791)
                     /locus_tag="VIT19_01735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837724.1"
                     /translation="MSCPLRVITSIAAVLLVFGASVGGQDFLPSAPSDRTLIYTLDER
                     NALTPLAFETARTPLKVTEKAKSTKTSYIEIAGEHSSKTLSTAPRIFLFTTERQGSHP
                     PFIVWLTPTRGARRATAIAQSGLTGFAIDSGQIVKPTIRVLEKFGDEVFMELRPRTSL
                     VPGEYAIIGDDLTRIATFRVSTEAVR"
     gene            1918..>2246
                     /locus_tag="VIT19_01740"
     CDS             1918..>2246
                     /locus_tag="VIT19_01740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837725.1"
                     /translation="MKKTSSSIGSSLATAFLALAVSGLPLFTGSLAQDITGGSSAELA
                     SAADVESRSGRGVFTAPKTVSHHAKRPEKKTVVRTTKVSKPQRETVATTRTDRTGTGG
                     TRTTGGGG"
BASE COUNT          488 a          656 c          600 g          502 t
ORIGIN      
        1 ttgaggctct tgatctcgaa cgttcgcgag ccggcgggcg tcgtcaccgt cacttcgtcg
       61 ccttcctctt tgcccatcag gctgcgaccg acgggcgaca cagtcgatat caaacccgcg
      121 gtcggatcgg attcttccgg cgtgaccagc cggtaagtca cctcttcttc gcgctcgccg
      181 tcatagagaa ccacgaccga gccgtaaccc actttgtcgt gtgaaatctt tgacagatca
      241 attgaagcga cttcactcag tctttggcga agctcacgga tgcgggcctt gaccatcgtc
      301 tgccgttgga gggcagtttg gtattcggag ttctcacgca ggtcgccaaa ctcgcgcgcg
      361 cgtttgatct ccttcggcaa gtgcacgaac aactcgcttt ccaactggtc gagctcgccc
      421 tggagtctct gtttaacgtc ggtactcacg tttcggaatc ctgttcagct tcaaaagcaa
      481 aaccacctgc tgaggcaggt ggcttaacgt tcctgctgcc tttcttaagc tttgcttttg
      541 tcgtttaacg cctcttcgac ggcctgccgc ataagcgtcg gcgtcgacaa cgcgttaaaa
      601 ccggagaagt gtttcacgat ctttccatca cgcgaaataa caaaactctg cggaatgacg
      661 ctccggccgt tcacgctctg caccagcgga cccgccaacg cgccatcatc ccaaaggatt
      721 ttgtaatcta cattctgcgc cttaatgaac tgtttgacgt gttcgggatc atctcgctcg
      781 ttgtaagtcg tcgccagtcc cagcacgact acaccgcggg acttatattc ctggttgagc
      841 ttcaccaagt ccggcatctc ctgacgacaa ggcccgcacc acgtcgccca aatgttcacg
      901 acgacgactt tgttgtcata atcggaaagc ttaagcgaac cgccatcgag cgtcttcacc
      961 ttcgtgtcac gaatttcttg tgagagcacc accggaccag ccggaatgat tctcgtcgtc
     1021 gaacgcggag gattggtgtt agcgacggga ctcgatgcca cactggggcc gctcccgttt
     1081 gtttgatctc cggaactgca tccagctaaa ccaaaaccgg cagacgcaca gatcaaaaag
     1141 atcgccactc cgggccaaaa tcctgtccgc ggcgcgtgat ccactgttga taacttcgac
     1201 tgttcgggca tttctccaac aactcctgac tcaacggact gcttcggttg aaactcgaaa
     1261 cgtcgcaatg cgcgtcaagt cgtcgccaat aatcgcatat tcgccgggca caagcgaagt
     1321 ccgcggtcgc agctccatga aaacttcgtc gccaaatttt tccagcacgc ggatggtcgg
     1381 cttaacgatt tgtcccgaat cgatcgcgaa tccggtcagg cctgattgag ctatggccgt
     1441 tgcccgacgc gcaccgcgtg ttggggtcaa ccagacgatg aacggggggt gactgccctg
     1501 acgctcggtc gtgaacagaa aaatccgcgg cgcggtcgaa agagtctttg atgaatgttc
     1561 accggctatt tcgatgtagc tggtcttcgt gcttttcgct ttctcagtca ctttgagcgg
     1621 cgttcgggcc gtttcgaatg caagtggggt taaggcgttc cgttcatcca gcgtgtaaat
     1681 gagtgtcctg tcggatgggg cggaaggcag aaaatcctga cctccaactg aagcgccgaa
     1741 taccagtaaa acagcggcga ttgaggtgat tacccgcagt ggacaactca tacagtcatt
     1801 taatgttggc gagccggcaa acgcaagctc ggtctcaacg agtctaaaac ttgtggccga
     1861 gggcgggtca cagtagactt ttccggcacg agtagcagaa ctatcgcccg gcgcactatg
     1921 aaaaaaactt ccagctcaat cggttccagt ttagccacgg cgtttttggc gctcgcggtg
     1981 tcaggcttgc cgcttttcac aggttcgttg gcgcaggaca tcacgggcgg ctcaagcgcc
     2041 gaactcgcca gcgccgcaga tgttgaatct cggtctggcc gcggcgtctt caccgctccg
     2101 aaaaccgtct cgcatcatgc gaagcgccct gaaaagaaaa cggtcgtccg cacaacgaaa
     2161 gtcagtaagc cacaacgtga gaccgttgcg acaaccagaa cggatcggac aggcacgggg
     2221 ggcacgcgaa cgacgggcgg cggcgg
//
LOCUS       DATDBY010000088         2052 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2172162, whole genome shotgun sequence.
ACCESSION   DATDBY010000088 DATDBY010000000
VERSION     DATDBY010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2172162"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1346
                     /locus_tag="VIT19_01745"
     CDS             <1..1346
                     /locus_tag="VIT19_01745"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEY5837726.1"
                     /translation="INRRQLAVIGGRAFSSSKDYREFVERVRAGDLQELASDELFRNV
                     IFADEGDLDHAALRLSRAAEEFREKRVEELPVQLPATEEIAAGDEPVPTGEDRRLGRT
                     PYVGLDRRAPFADSIRRFATQIDAAEPSQIYESILAQSADLLDAERSSLWLFDAESNQ
                     LNIKAARGIPVGQRDIEAIRVGEGIAGSVISAGQPLVTTIDALGKQSLPERNYKTRSF
                     ISYPITIGARKIGVLNMTDRRSGAAYDESDLEVIDLVAPQIALALERATWQHRANEFQ
                     LMAITDPLTGLHNRRYMEARLSEELNRSKRYEFPMSLMMIDIDDFKLYNDRNGHQAGD
                     RALEITAQCLRSTLRKVDVASRYGGEEFTILLPQTSLKEAGAIADRLRRKIMTTKFPH
                     GDSQPQGAVTISIGLSSLSASVDSAEAIIRAADRALYHAKSHGKNRAYAYQGAMS"
     gene            1461..>2052
                     /locus_tag="VIT19_01750"
     CDS             1461..>2052
                     /locus_tag="VIT19_01750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837727.1"
                     /translation="MSHQRILAKLARDEFVGRDAELHRLISYSSQPNERKLLLLAAPN
                     AGGSEFLRQAYDELFFRRTQAAPIHFSFRAHEGNLVDVGVDFFRTFLQQYVAYRRVDP
                     SLLTTALTAEDVAEAALPTDYEAITSLLETFAREKTSADELTFLRFCLQAPQKLAAAT
                     RRPLLPLIDCLPLADESDAGPLMRELTQAFLRRTPFV"
BASE COUNT          445 a          563 c          605 g          439 t
ORIGIN      
        1 agattaacag gcggcaactt gcagtgatcg gcggccgcgc cttcagcagc agcaaggatt
       61 atcgcgaatt tgtcgagcgg gtacgggccg gcgacctgca agagttagct tccgacgaat
      121 tgtttcgcaa tgtgattttc gcggacgaag gtgacctcga tcatgcagcc ttgagactaa
      181 gccgcgccgc ggaggagttt cgcgagaaac gggttgagga gcttccggta caattaccgg
      241 cgacagaaga aatcgcggcg ggcgatgagc cggtaccaac aggtgaagac cgacgcctgg
      301 gacgtactcc gtacgtgggt ctggatcgcc gcgccccatt tgctgattcg attcgccgct
      361 tcgccacaca gattgatgcc gccgagccgt cacagattta cgaatcgatc ctggcgcaat
      421 ccgcggactt gctggacgcc gaacgcagtt cgctttggtt gttcgacgcg gaatcgaacc
      481 agttaaacat taaagccgcg cgcggcattc cggtcggtca gcgcgacatc gaagctatcc
      541 gcgtgggtga gggaatcgcc ggttcggtga tcagcgccgg acaaccgctg gttaccacga
      601 ttgatgcgct gggcaaacag tcgttgccgg aacggaatta caaaacgaga tctttcatca
      661 gctacccgat cacgattggc gcgcgaaaaa tcggggtcct gaacatgacg gacagacgga
      721 gcggcgcggc ttatgacgaa tcagacctgg aagtaatcga tctcgttgcg ccgcaaatcg
      781 cgctggcgct tgagcgcgcc acgtggcaac accgcgcgaa cgagtttcag ttgatggcga
      841 ttacggatcc cctgacaggt ttgcacaacc gccgctatat ggaagcgcgt ttgtctgagg
      901 aactaaatcg ttcgaagcgt tacgagtttc cgatgagcct catgatgatc gacatcgacg
      961 atttcaagct ctacaacgac cgcaacggtc atcaggcggg cgatcgcgcg ctggaaataa
     1021 cggcgcagtg cttgcgctca acgctgcgga aggtcgacgt cgcatcgcgc tatggcggcg
     1081 aagagttcac aattcttctg ccgcaaacga gtttgaaaga agccggcgcc atcgctgatc
     1141 ggttgaggcg caaaatcatg acgacgaagt ttccccacgg cgattcgcag ccgcagggcg
     1201 ccgtgaccat tagcatcggc ttatcgtcgc tgtctgcgtc agtcgattcc gccgaagcaa
     1261 ttatccgggc cgccgaccgc gcgttgtatc acgcgaagag tcacggcaag aaccgcgcgt
     1321 acgcatatca gggtgcgatg agttaatcag tagtggcaca gactttagtc tgtgtttagt
     1381 cttcgggatg tttgttcgcc tcttgaatta gttgaaatca caggacgcaa gcctgtgcca
     1441 ctcggcgaag taatttaacg atgagtcatc aacgcattct tgcgaagttg gcgcgggacg
     1501 aatttgtcgg ccgcgatgcc gagctgcatc gactcatcag ctactcatcg caaccaaatg
     1561 aacggaagct tctgttgttg gcggcgccca atgcgggcgg ctcggaattt ttgcgacagg
     1621 cttacgacga actgttcttc agacgcactc aggccgcgcc aattcatttt tcgtttcggg
     1681 ctcatgaggg aaacctcgtc gatgttggcg tcgatttctt ccggacattt ctgcagcaat
     1741 atgtcgcgta tcgtcgggtt gacccttcgc tgctgacgac ggcactgacc gccgaggacg
     1801 tggcggaagc cgcgctccct actgactacg aagccattac ctcgctgttg gaaacattcg
     1861 cccgcgaaaa gacgtccgcc gacgagctga catttcttcg cttctgtttg caggcgccgc
     1921 agaagctggc ggcggcaacc aggcgaccgc tgcttccgct gatcgattgt ctgccgctgg
     1981 cggatgaatc agacgccggt cctttaatga gggaattaac gcaggcgttt ctgcgacgta
     2041 ctccatttgt tg
//
LOCUS       DATDBY010000089         2692 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2603760, whole genome shotgun sequence.
ACCESSION   DATDBY010000089 DATDBY010000000
VERSION     DATDBY010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2692
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2603760"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(231..1430)
                     /locus_tag="VIT19_01755"
     CDS             complement(231..1430)
                     /locus_tag="VIT19_01755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837728.1"
                     /translation="MTRRRKFLLALLVIVVLSQAPFAYRRYRLKRLQNTIQQLASQRT
                     PNDTATEYVDYKGVIHVHTSLGGHSSGTFTELIAAANSNDLDFVIMTEHPQAEFDTAA
                     MTLSGVHAGVLFVNGNEVATADGDRLLLIPAPPNANERRSTKEVVEQQKASHGLAFAA
                     YPTESNTWQSNAVDGIEIYNLFTNTKRMNRVVTFFDGLWSYRSYPDLMFANFFARPTE
                     ELKRWDEAMSSSNRRLVAVGGNDAHSNVGFGLADATGKQIVGVKLDPYERSFRTVRTH
                     VLIQKDKPLTRESLLEALSLGHCYVSFDIFGDAAGFDFRLVQSSGVMGDETAYAQPLE
                     LIARAPLASRFVLLRNGVAVNQSAGSTVRFPVTAPGIYRIEVYLDSLPPPATGKPWIL
                     SNPIYVR"
     gene            complement(1427..>2692)
                     /locus_tag="VIT19_01760"
     CDS             complement(1427..>2692)
                     /locus_tag="VIT19_01760"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEY5837729.1"
                     /translation="PALTHWSHPSFFAYFATSTSAPGIFGELLSAAFDTKALNWRAAP
                     AATELEDVTLGWLRQMMGLPQTFGGIIYDTASVSTLHALAAARENLSLRIREDGMAGR
                     PDLPLLRVYTSEHAHSVVDKAAMTLGLGQRSVRKIAADAEFRMDPAALRRAIQDDREE
                     GFLPFAVVATVGTTSTSSIDPISAIADICEREKLWLHIDAAYAGSAAIVPEFRHLFNG
                     CERADSFTLNPHKWLFTPFDLSVLFCRHMEILHRAFSLVIEVLRTSEAERNTVINHSE
                     YGIQLGRRFRALKLWMIIRYFGHEGLAARIREHVRLAKLFASWVEESPDWELMAPTPF
                     ALVCFRANPAHSQSREVGKPTDILNETIMHALNATGKAFLSHTKLNDKLVLRLSIGNI
                     RTTEAHVRRVWELLNEQLRRLQAEAPLNK"
BASE COUNT          604 a          737 c          787 g          564 t
ORIGIN      
        1 cagcaccacc gcgatcacaa tcgcgaagtg aacggcgcgc ttctggacaa cccaccaatc
       61 gaactgaaac tggcttgatc ttgtagacat tgaacggcgt tgcgcgagat gaagagaggc
      121 agggaatccc gagaaagtcg gaattcaaac agccaacgca gtttaacaca gcgtcatggc
      181 agtgctcaat agatagattt tcgccggttt ttgaaccttt ttcgccggga tcagcgaacg
      241 tagatggggt tcgagaggat ccagggcttt cccgtcgcag ggggcggcag ggagtcgaga
      301 tagacctcga ttcggtaaat tccgggagcc gtcaccggaa atcgcactgt cgacccggcc
      361 gattgattga cggcaacgcc gtttcgtagc aggacgaagc ggctggcaag aggagctcgg
      421 gcgatcaatt cgagtggctg tgcgtacgca gtttcatcgc ccatgactcc agaggattga
      481 accagtcgaa aatcgaaacc tgccgcatcg ccgaagatgt cgaatgaaac gtaacagtgg
      541 ccgagcgaga gcgcctcgag cagcgattcg cgagtgagtg gcttatcctt ttggatcaga
      601 acgtgagttc gaacggtgcg aaagcttcgc tcatacggat ccaacttcac accgacaatc
      661 tgcttgccgg ttgcatcagc gagtccgaaa ccaacattcg aatgcgcatc gttgccgccg
      721 acggccacca gtcggcgatt gctcgatgac attgcctcat cccagcgttt caattcttcc
      781 gtcggacgcg cgaagaagtt tgcgaacatc agatcgggat agctgcgata tgaccaaagc
      841 ccgtcgaaga acgttaccac ccggttcatc cgcttcgtgt ttgtgaacag gttatagatt
      901 tcgataccgt ccactgcgtt cgactgccag gtgttcgact ctgttgggta cgccgcgaac
      961 gccaaaccgt gactcgcctt ttgctgctca accacttcct tcgttgagcg tctttcgttt
     1021 gcattaggcg gtgcgggaat cagcaacagc cgatcaccgt ccgccgtcgc cacttcattt
     1081 ccgttcacga acagaacgcc ggcgtgcact ccgctcaacg tcatcgccgc ggtgtcgaac
     1141 tcggcttgcg ggtgctcagt catgatcacg aagtcgagat cgtttgaatt cgccgccgcg
     1201 atcaattctg tgaaggttcc gctgctgtgc ccgccgagcg aagtgtgtac gtgaatgacg
     1261 cccttgtaat ctacgtactc ggtagcagtg tcgtttggcg tccgctgtga cgcgagttgc
     1321 tgaatcgtat tttgcagacg cttcaggcga taccggcgat acgcaaacgg cgcctgcgac
     1381 aatacgacga ttacgagcag ggcgagcagg aacttgcggc ggcgggtcat ttattcaggg
     1441 gtgcttcggc ttgcagacgc cggagttgtt cgttcagcag ttcccacacg cggcggacgt
     1501 gtgcttcagt cgtgcggatg ttgccgattg aaagacgcag caccagtttg tcgttgagtt
     1561 ttgtgtgcga aagaaaggct ttacccgtag cgttcaaggc atgcatgatg gtttcattca
     1621 gtatatccgt tggtttgccg acttcacgtg actggctatg cgcggggtta gcccgaaaac
     1681 aaaccagtgc gaacggcgta ggcgccatca gctcccaatc cggcgactct tcaacccacg
     1741 acgcgaacag ctttgccagc cggacgtgtt cgcgaatgcg cgcggcaagt ccttcgtgac
     1801 cgaaataacg gatgatcatc cagagtttca gcgcacgaaa gcgacgaccg agctgaatgc
     1861 catactccga atgattaatg acggtgttgc gctctgcttc agatgtgcgc agcacttcga
     1921 tgaccaacga aaacgcgcga tgcaggatct ccatgtgacg gcaaaacagt accgacaggt
     1981 cgaacggtgt gaataaccat ttgtgcggat tcagggtgaa cgagtcagcc cgctcgcagc
     2041 cattaaatag gtgtcggaac tcaggaacga tcgcggctga gccggcgtac gctgcgtcga
     2101 tgtgcagcca aagtttctcg cgttcacaaa tgtccgcgat ggctgaaatt ggatcgatgc
     2161 tgctggtcga agttgtgccc acggtggcaa ccactgcgaa tggcagaaat ccttcttccc
     2221 tgtcgtcttg aattgcgcgg cgaagtgcag ctggatccat gcggaactcg gcgtccgcgg
     2281 caatcttgcg gaccgagcgc tggccgagtc ccagagtcat cgcagcttta tcgacaacgg
     2341 aatgcgcgtg ctctgaggtg taaacgcgga gaagcggtaa gtccggacgc ccggccatgc
     2401 cgtcttcgcg aatccgcaga ctgagattct cgcgcgccgc ggccaaggca tgaagcgtcg
     2461 aaactgaagc agtgtcgtag atgattccac cgaacgtttg cggcagcccc atcatctgcc
     2521 gtagccaacc aagcgtcaca tcctccagct cagtagcggc gggcgcggcg cgccagttca
     2581 aagccttcgt gtcaaaggcc gcggacaaca gctcgccaaa aatccccggg gcggaggttg
     2641 aggtggcgaa gtaagcgaag aatgaaggat ggctccagtg agtcagcgcg gg
//
LOCUS       DATDBY010000090         3027 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1124685, whole genome shotgun sequence.
ACCESSION   DATDBY010000090 DATDBY010000000
VERSION     DATDBY010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3027
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1124685"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..992)
                     /locus_tag="VIT19_01765"
     CDS             complement(<1..992)
                     /locus_tag="VIT19_01765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837730.1"
                     /translation="MRSLLLKSGIVVVVICAFAVAASAYTLVFRNGNRMEIPDEFTVT
                     RTTLTYEMAPGFQKTILVSLIDIGATERANNEPWGSFFKRSQIAQQRAQSSQTPEPLP
                     PTPQATKTVTNSDLAAIRQRRLESEQAYEQRRLQLGLPTVAETRMRQQEDERLFRSGL
                     RDRAAATSREESFWRGRARELRTEIATVDNQLNYVRARLNEVNESSRVTPSITQVYPS
                     WPDYGPWSRDRWGRRNRRQTTPPIFGPPQNPYGYPNGQYPNGYPQGQNPYGYPQGQNP
                     YGYPQGQSPYGYPGQNPYGYPGQYPYGYPGQGPYGYPNQNPYGYPTSPYDADKS"
     gene            complement(1101..2747)
                     /locus_tag="VIT19_01770"
     CDS             complement(1101..2747)
                     /locus_tag="VIT19_01770"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5837731.1"
                     /translation="MKSLVACLLVLATFAMGVGQRQNPRRSQNIKAPATQTIRICQGV
                     PIPDGYVIVAYLTSGACPHGSYVLKRVNSYESSLGVNRNSADPKTSSTGASDPGKQLP
                     PARTATDKGTRSSAKRSTLPAPSNSASQPFANSPAAGRGTPAASRPRVVGNRQTQDQS
                     ANALVSTPQSQDEETGPPTLTGSDPSRPSGPPTLAKAGSQPQTSNTTDVNDPAAEPTA
                     EELSEGDVLRVDTTLVTVPVSVLDRQGRFISNLKREDFTLLENGNEQSIAFFETAEKP
                     FTVALVLDTSASTQFKLSEIKAAALEFAKQLRPQDRVLVVTFNSEVLLLTEPTNDLVL
                     MEETIEEFVHTGTATRLYDAVNLTIVERLNRIKGRKAIVLFTDGVDTASQQASYQSTL
                     EQVEELDALIYPVQYDTTDYMRAMQGSGQGTVTVTTTRRGIFGSSSSTQTYNAPANSG
                     APMPGTTKEDYDRANVYLQALADKTGGRLYPAKDTKQLADSFTAIAEELRRQYTLGYY
                     PKTASVADGERRAIRVRVRQPNLAVKARNSYVKSSPSQNK"
     gene            2801..>3027
                     /locus_tag="VIT19_01775"
     CDS             2801..>3027
                     /locus_tag="VIT19_01775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837732.1"
                     /translation="MRIKDQAGQGFLFGRKKSLLSLSQFDVISTPQNLAICTGPRIHC
                     DPQGLTVFTGGNDNMAKTVCKILGVVFLIVGV"
BASE COUNT          593 a          851 c          884 g          699 t
ORIGIN      
        1 atagacttat cggcatcgta aggcgacgtc ggatacccat agggattttg gttgggataa
       61 ccgtaagggc cctgacccgg atagccatac ggatactgac ccgggtatcc gtacgggttc
      121 tgacctggat agccgtaagg gctctgtcct tggggatagc cgtaggggtt ctgtccttgg
      181 ggatagccgt aggggttctg cccttgagga taaccatttg gatattggcc gttgggatac
      241 ccgtaagggt tttgcggcgg tccgaagatc ggcggagtcg tctggcgccg gttgcgacgt
      301 ccccaacgat cgcgcgacca cggcccatag tccggccagg agggatagac ttgggtgata
      361 ctcggtgtga cccgcgacga ttcattgact tcatttagcc gcgcgcgaac gtaattgagc
      421 tgattatcaa ccgtcgcgat ctcagtgcgc agttcccgcg cgcgtccacg ccaaaatgat
      481 tcttcgcgcg aagtagccgc ggcccgatcg cgtagcccgg aacggaagag cctctcatct
      541 tcttgctggc gcatgcgcgt ttcggcgaca gttggcagcc ccaattgcaa acggcgctgc
      601 tcgtacgctt gctcgctttc cagccggcgc tgacgaatcg cggccaggtc gctgttagtc
      661 accgtcttgg tggcttgcgg agtaggcgga agaggctcgg gcgtttgcga agactgagcc
      721 cgctgctgcg caatctgact gcgcttgaaa aagcttcccc agggttcatt gttagcgcgc
      781 tcagtggcgc cgatatcaat caaactcacc agaattgtct tctgaaaacc cggcgccatt
      841 tcataggtta aagtcgttct ggtgactgtg aactcatcag gtatttccat ccggttgcca
      901 ttgcgaaaca ccagcgtgta agcgctggca gcaactgcga acgcgcaaat caccacaacg
      961 acgattcccg atttaagtaa gagtgatcgc acggagaccc ctttatctaa caaatgattc
     1021 ctgagcatga taagtaccgc ctttctaact ccgccaattt tggggccgcc gcactcagcc
     1081 ggacgttggt ggatccgcaa ttacttgttc tgactcggtg aagacttcac gtaactgttg
     1141 cgcgccttca ccgcaaggtt cggttggcgc acgcgcacac gaatcgcgcg acgctcgccg
     1201 tctgcaacgc tcgcggtctt cgggtaatag ccaagcgtgt actgccggcg caactcttca
     1261 gcgatggccg tgaatgaatc ggccaactgt ttcgtgtcct tcgccggata aagacggccg
     1321 ccggtcttat cggccaacgc ttgtagataa acattcgccc ggtcgtagtc ttccttggtt
     1381 gtgccgggca tgggcgcgcc actgttcgcg ggcgcgttat acgtttgcgt cgagctggac
     1441 gatccaaaaa tgcctcgtcg agtagtcgtc actgtgaccg tgccctggcc gctgccttgc
     1501 atcgcgcgca tgtagtcggt ggtgtcgtac tgaactggat agatgagcgc gtccaactct
     1561 tcaacctgct ccaaagtgct ttgatacgaa gcctgctggc tcgccgtatc gacaccgtcg
     1621 gtgaacagca caatcgcctt gcgacctttg attcggttta gccgctcaac gatcgtcagg
     1681 ttaaccgcgt cgtacaaacg cgtcgctgtg cccgtgtgca caaattcttc gatggtctct
     1741 tccatcaaca ccaggtcgtt cgtcggttcg gtcagcagca acacttcgct gttgaaagtg
     1801 acgacgagta cgcgatcctg cggccgtagt tgtttcgcga actcgagtgc cgccgccttg
     1861 atctcggaca gcttgaactg cgtcgatgcc gaagtgtcga gcactaacgc gacggtaaaa
     1921 ggcttttcgg ccgtctcgaa gaacgcgatc gattgttcgt tgccgttctc gagcagcgtg
     1981 aagtcttcac gcttgaggtt cgaaatgaag cgtccctggc gatcgagaac acttaccgga
     2041 accgttacca gcgtcgtgtc aacgcgcagg acatcgcctt cactaagctc ttcagctgtg
     2101 ggttcggccg ccggatcgtt aacgtccgtc gtgttcgagg tttgcggctg agagcccgcc
     2161 ttcgccaagg tcggcggacc tgacggtcgc gacgggtcgc tgccagtcaa cgtgggcggg
     2221 ccggtttctt catcctgcga ctgaggcgtg ctgacaaggg cgttcgcgga ctgatcttga
     2281 gtttgccggt tgcctacgac gcgcgggcgc gatgcggcgg gtgtaccccg gccagccgcg
     2341 ggcgaattcg caaacggttg cgacgcgctg ttagacggcg cgggcaaggt cgatcgtttc
     2401 gccgaacttc gcgtgccttt gtcggtcgcg gttcttgccg gcggcagttg ttttcctgga
     2461 tcgctcgcgc cggtggagga agtcttcggg tccgctgagt ttcgattcac acctaacgaa
     2521 ctctcgtatg aattcactct tttcagaacg tatgagccat gcggacaagc cccggacgtc
     2581 aggtacgcca cgatcacgta accgtcaggg atgggcacac cctggcagat cctgatcgtc
     2641 tgcgttgcag gcgccttgat gttctgggac cgccgcgggt tttggcgctg accaactccc
     2701 atggcaaacg tggcgaggac cagcaagcaa gcgaccaatg acttcatgtc gctaccccct
     2761 tgaccgaatt gttcgagatt ggggcgcatt atactccccc atgaggatta aagatcaagc
     2821 ggggcaggga ttcctgttcg gacgaaaaaa aagtctgtta tccctgagtc agtttgatgt
     2881 aatatccacg ccgcaaaacc tcgcaatttg tacaggtcca cggattcatt gcgatccgca
     2941 gggattgact gttttcacag gaggaaacga caacatggca aagacagttt gcaaaatcct
     3001 cggcgtagtc tttctaatcg tgggggt
//
LOCUS       DATDBY010000091         4494 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2341633, whole genome shotgun sequence.
ACCESSION   DATDBY010000091 DATDBY010000000
VERSION     DATDBY010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4494
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2341633"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..739)
                     /locus_tag="VIT19_01780"
     CDS             complement(<1..739)
                     /locus_tag="VIT19_01780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837733.1"
                     /translation="MLKFLRSILILLVASLAPAALCHVAAQSTNQELPTPVLSNEING
                     TIVPLDLGDSRFTRHYYAFEAAPGDLIVTVNSRNLNGDVDVFTAVTFRPLTKITVYAG
                     TIPPEVTKSLYFRTRQIVILRVEARTPNDDAGNYRITLGGSFQPFTGGIPVAENVPTE
                     TEPDKRADKNVQRLSSVGATIPRPPGEVAVEEPKPAETELEKPAEEKPVTPAPTTRRN
                     TSRTPPRRNPRGRTPPRTTRTTPPKTET"
     gene            1420..2670
                     /locus_tag="VIT19_01785"
     CDS             1420..2670
                     /locus_tag="VIT19_01785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837734.1"
                     /translation="MNLRKLFVLSILTLGIALALVGPKNSQNTAKAAVAVCTVPGTYA
                     LIQDAVNDVGCTTINVAAGAYAETVTIGRSVTLNGAQAGNAVSGRTFAGAGESTVTGK
                     ITLQAADVTIDGFSLTNPGQVGAAFGIVVKTAGSGATIQNNIIENVSSATCCADSQAT
                     AQGIYLENGPDNVSILENAIRNISSDRSAKGIHVGDSLASNPSLNTLVEGNTIEDISS
                     GTRGAYGVQVNNGASTVPAATGYTEITVRDNVIDDLTGGGWAHAIGLEGDTPVAVVEG
                     NCISDVTDLSPTPVNDAIAVWFEANPSFSAGEVHQNNFTGVDVGIAVHPSLTGPAVDG
                     ENNWWGSATGPGPVGPGVGAKVSPNVDYDPWLLFPAAGGACGSPIATNKDQCKNGGWQ
                     TVVRANGSPFKNQGDCIQYANTGK"
     gene            2752..3891
                     /locus_tag="VIT19_01790"
     CDS             2752..3891
                     /locus_tag="VIT19_01790"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosD domain-containing protein"
                     /protein_id="HEY5837735.1"
                     /translation="MNLKKPLVFTIFALALTIVLATSVPTTRAAATLVVDDDLACPGA
                     TFSTIQSAAAVALPGDTIQVCAGTYIEDVAIISPGVSLLGAGAGVTTISGAIGGDGAT
                     VRVAASNVTVAGFTITREGNNTTDWNNPGLNSVGLAVQGQAITGMLVRDNVITGNRTG
                     IDINHSNGHTVRNNSITDNRTGMILRNQTDNLTVTENFITNNWTVGVLFLDASVGTNV
                     PLQQALNSNFNNNDLSGNWYGQVVDRQTGGSLPAPGTTNTKDFTGNWWGTTTPVVTTA
                     NSAEPGYAAQIPVAYGGTATAPGGPPDIAGAASANIIYLPLLKSGTDTNVETTPGRGT
                     NGFQGVKTAANKGQCQGGGWLLVVNGSGNPFKNQGQCIQYVNTGK"
BASE COUNT         1033 a         1249 c         1252 g          960 t
ORIGIN      
        1 cggtttcggt ttttggagga gtcgtccgcg tagttcgtgg cggcgtacgt ccacgcgggt
       61 tccgccgcgg cggtgttctc gatgtgttcc ggcgcgtcgt cggagccggc gttacaggtt
      121 tttcttccgc aggcttttcg agctcggtct cagccggctt cggttcttcc actgctactt
      181 ctcccggcgg cctcgggatc gtcgcgccga ccgatgaaag tcgctgcacg ttcttgtcgg
      241 cccgtttgtc gggctcagtt tcggtcggaa cattctcggc taccggaatg ccgccggtga
      301 acggctgaaa cgatccgccc agcgtgatgc gatagttacc ggcatcgtcg ttgggcgtcc
      361 gtgcttcaac gcgcaaaatc acaatctgtc gcgtgcgaaa gtacagactc tttgtcactt
      421 ccggcggaat cgtgccggcg taaactgtga tcttcgtcag cggtctaaac gtgacggccg
      481 tgaagacatc gacatcgcca ttcaggttcc ggctgttcac cgtcacgatt agatcaccgg
      541 gcgctgcttc gaacgcgtag tagtggcgcg taaagcgcga atcgccgaga tcaaggggca
      601 cgatcgttcc attgatttcg ttgctcaaga cgggtgttgg caactcctga ttcgtcgact
      661 gtgcggcaac atggcacaac gcagcgggcg ctaacgaagc gactaataga atcaggattg
      721 aacgcaaaaa cttcaacatc acggtccttc agtaacgagc tctttcagtt tgatgcatca
      781 ccaaggtttg agcgatgcga ttctacaggc cgtaacgatg tcgtggcaaa agcatagacc
      841 tcaacttctt caaagcgtcc cgcccaacgc gccgcacatg aggggctgcc cgtttgttgt
      901 cgccacagaa ttggtctgat tgccctctga gtgaaaagac cttccgatgg gtattttcac
      961 gctggaccat atttatcgac gttcaccaag aagcgacaat accgcgattt tagttagttt
     1021 cggaaaggaa cagtcattgc tcttctaact agatcatcac agctttttcg cgcgagaacc
     1081 cgtctttgac gctctcgtat tttgcaaaat taaatgcaac ggcacgcgcc gaccttcttg
     1141 tttctgaaaa ggcgtctcag gttgacagtg ctaggtggcg acgatagagt acgcatgctc
     1201 ttaagaagtt ttttccaccg acggttgggt gcgaacaccc gacggtgcgt gtggtgtcag
     1261 aagtcgaaaa gcccccaaga cgtttctctt gcccgcttgc cgcttctccc tgaacacccg
     1321 cggaaaatct tagcttcaaa aacttttcgg cgttgaagtg tcttcgccga tccggtcggt
     1381 tgtttggacg accctcactt acgaaaaagg agaaatcaat tgaatcttag gaaactattt
     1441 gtcttatcaa tcctgacgtt agggattgcg cttgccctgg tagggccgaa gaatagtcag
     1501 aacacggcga aggcggcagt ggcagtctgt acagttcctg gcacctatgc gttgattcaa
     1561 gacgcagtta acgacgtagg ctgcactacg atcaacgtcg cggcaggagc gtacgcggaa
     1621 accgtaacaa tcggccggag cgttactctg aacggcgcgc aggccggtaa cgccgtcagc
     1681 gggcggacgt tcgccggcgc cggcgagtcc acagtaacgg gcaaaatcac tcttcaagct
     1741 gcagatgtca cgattgatgg cttctcgtta acgaacccag ggcaagttgg tgctgccttt
     1801 ggaattgtgg tcaaaacggc tggcagtggc gcgacaatcc aaaataacat tatcgaaaat
     1861 gttagcagtg cgacatgctg tgcggattca caggccacag cacaaggcat ttaccttgaa
     1921 aacggtccgg acaatgtctc gattctggag aacgcaatcc ggaacatttc cagcgaccgt
     1981 tcggcaaagg gaattcacgt gggcgatagt ctggcttcta atccgagcct gaacacactc
     2041 gtcgaaggaa acacgattga ggacatctcg agtggaactc ggggtgctta tggggtccag
     2101 gttaacaacg gtgcgagtac ggtccccgcg gcaaccggtt acaccgaaat caccgtacgg
     2161 gataacgtga tcgacgactt gactggcggg ggctgggccc acgccattgg attggaaggc
     2221 gacactccag ttgcggtggt cgagggcaac tgcataagtg atgttacgga tctgtctcct
     2281 acgccagtca acgatgcaat tgcagtctgg ttcgaagcca acccgtcgtt ctctgcgggc
     2341 gaagttcatc agaataactt cacaggcgtc gacgttggaa tcgcagttca cccgtccctg
     2401 actggaccgg cggtggacgg tgaaaacaac tggtggggat cagctactgg tcccggaccg
     2461 gtcggtcccg gcgtcggagc caaggtcagt cccaatgtgg actacgatcc ttggttgctt
     2521 ttcccggcgg ccggcggagc ctgcggcagt ccgatcgcga ccaacaagga ccagtgcaag
     2581 aacggtggct ggcaaacggt cgtgcgtgct aacggttcgc cgttcaaaaa ccagggcgac
     2641 tgcatccagt acgccaacac tggcaagtag tctaacttta ctctccgagg cggtcggcgc
     2701 gagtcggccg cttcttaacc tcgtccaata attaataaga aagagaaatc aatgaatttg
     2761 aaaaaaccct tagtgttcac gatctttgca ttagcgttaa caattgttct agcaacttcg
     2821 gttcccacca cgcgcgcggc cgcaacatta gtcgttgatg acgatttggc atgtcccgga
     2881 gcgacctttt caaccattca atctgcagca gcagtggctc ttcccggtga tacgatccaa
     2941 gtctgcgcgg gcacatacat tgaggacgta gccataatta gcccgggtgt cagcctcctc
     3001 ggcgcgggcg ccggcgtcac cacgatcagc ggcgcgatcg gcggcgacgg cgccacagtg
     3061 cgcgtggcag ccagcaacgt taccgttgcc ggtttcacga tcacgcgcga aggcaacaac
     3121 acgacggatt ggaacaaccc aggactgaac tcagtgggcc tcgcagttca gggccaggca
     3181 atcacgggca tgctcgtgcg cgacaacgtg atcaccggca accgcaccgg catcgacatc
     3241 aaccatagca acggccacac cgttcgcaat aactcgatta ccgataaccg gacgggtatg
     3301 attctccgca atcaaacgga caacctgacc gtcacggaga acttcatcac taacaactgg
     3361 acggtcggcg tgctattcct ggacgccagc gtcggcacca acgtcccgct gcagcaggcg
     3421 ctcaactcca acttcaacaa taacgatctc agcggtaact ggtacggcca agtcgtagac
     3481 cgccaaaccg gtggctcgct cccggctcca ggcacgacca acacaaagga cttcacgggc
     3541 aactggtggg gaacgacgac cccggttgtt actaccgcaa acagcgccga gcccggttac
     3601 gccgcgcaga ttcccgtcgc ctacggcggc acggcgaccg ccccgggggg cccgcccgac
     3661 atcgctggcg ccgcgtccgc caacatcatc tacctcccgc tgcttaagag cggcacggac
     3721 accaacgtag aaacgacacc tggtcgcggc accaatggct tccagggcgt caagactgcg
     3781 gcgaacaagg ggcagtgcca gggcggcggg tggctgctcg tggttaacgg ctccggcaac
     3841 ccgttcaaga atcaggggca gtgcatccag tacgtaaaca ctggaaagta gtctaattcg
     3901 aagtacgagg cggccggcgc gagtcgcccg cctcggactt aaacaagcga aaaggcgagg
     3961 cttcgtgcct cgcctttttt ttgagtacgg tgaagtttcc ctaacgtctc tctcattctc
     4021 tttagtcctc tctccagtaa tagacaccaa acaggcacta cagaactctt tgatcaattc
     4081 cagcgagatc ggaaggatta agctcgggaa attgcggcgc ggccgagtcc aatagttgcg
     4141 aaatcacgca actgtgcgcg cgcggctgcg aagttttgcg ctgcgacgat ggtcgcagtg
     4201 aaggtcgtca attgtgattg ccggcggttt tagaaggacg cgtacagaga ttcttgattc
     4261 tttgcgaggc acctaaacac ttctgagcaa tgccacgtta tcgagggcga tattgataat
     4321 gatgcggccc gtggtttgcc agtatgaggt cggaatatga aaacaatcat tgaacctttc
     4381 aaagtcaaag tagtcgaacc catcaagatg acctcgggcg aggagcgcga aggctttctt
     4441 aaagatgcgg catataactt attcctgctc aaagccgaaa acgtgatcat tgat
//
LOCUS       DATDBY010000092         2289 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2972029, whole genome shotgun sequence.
ACCESSION   DATDBY010000092 DATDBY010000000
VERSION     DATDBY010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2972029"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1081
                     /locus_tag="VIT19_01795"
     CDS             <1..1081
                     /locus_tag="VIT19_01795"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEY5837736.1"
                     /translation="IMRIGGELYPVADASKLCPEDTLDMAFSMMSNRQKQKLKEVSEV
                     DIAYSVKGLGRFRANIFQQRGTVSIVLRVIPDQSKTSAALGLPSVIDRIAEERRGLIL
                     VTGATGSGKSTTLAAMIDRINTTRSGHIVTIEDPIEFLHRDKVAFVTQREVDVDTRSF
                     AEALRGALRQDPDVILVGEMRDLETISTALTAAETGHLVLSTLHTLDATETIMRIVSS
                     FPSHQQKSVRIQLAGILKAVISMRLVRGAKGSERVPAVEVMVSTALIRDYIVNEDKTS
                     SIREAIANGASQYNMQTFDQSLFQLLQAREITYEEAIHNATNADEFKMRVSGIFSTDQ
                     TTMENSGAMNFFEPPPEEFERIVSR"
     gene            1395..>2289
                     /locus_tag="VIT19_01800"
     CDS             1395..>2289
                     /locus_tag="VIT19_01800"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEY5837737.1"
                     /translation="MHRERALNSTPAKWILIGLGWVAFALFFASEIIIRRANAGFPPN
                     IQRAVVIWLICAGLWFAVTPLILGLARRFPIDRQRWVGSGLIHLAVSCLISFVLLGIY
                     TAITSALGLGEARQSLWQAFRAQLVGSFHAEVLTYWMVIGLSHVIDYYRKYRERELRA
                     SQLEVTLSQARLDALRMQLHPHFLFNTLNSISVLMSEDVTAARRMLTRLSDLLRASLD
                     NAATHEVSLREELEFLNNYLQIEQTRFHDRLTVRMDIDPAVLTATVPNLILQPLVENA
                     IRHGIAPRAQPGVIDISATREN"
BASE COUNT          494 a          648 c          632 g          515 t
ORIGIN      
        1 catcatgcgc atcggcggtg aactctatcc cgtcgccgac gcgtcgaagc tttgtcccga
       61 agacacgctc gacatggcgt tttcgatgat gtcgaatcgc cagaaacaga agctgaagga
      121 agtttctgaa gtcgatattg catacagcgt taaaggtctc gggcgttttc gcgcgaacat
      181 ttttcaacag cgaggcacag tgagtatcgt tctgcgcgtg attcccgatc agagcaagac
      241 ctcagcagcg ctcggcttgc catcggtaat cgatcgaatc gccgaagagc gacgcggctt
      301 gattctggta acgggcgcga cgggttcagg caaatcgacg accctggcgg cgatgatcga
      361 tcgcatcaac acgacgcggt ctggtcatat cgtaacgatc gaagatccga ttgagtttct
      421 ccatcgcgac aaggtggcct ttgtcactca gcgcgaagtg gacgttgata cgcgttcgtt
      481 cgccgaagcc ctgcgcggcg cgctccgtca ggatccggac gtgattctgg tcggtgagat
      541 gcgcgacctg gaaacgatca gcactgcgct gaccgcggct gagaccggcc atctcgtgtt
      601 atcgacgttg cacacactcg acgcgaccga aacgatcatg cgcatcgttt catcgttccc
      661 ttcgcatcaa cagaagtccg tccgcattca gttggccgga attctgaaag cggtgatttc
      721 gatgcgactg gtccgcggcg caaaaggctc ggaacgcgtg ccggccgtcg aagtgatggt
      781 ttcgacggcg ctgattcggg attacatcgt caacgaggac aagacttcgt cgattcgcga
      841 agccatcgcg aatggcgcgt cgcaatacaa catgcagaca ttcgatcagt cgctgttcca
      901 gttgcttcag gcgcgcgaga tcacttacga agaggcaatt cacaacgcga ccaatgcgga
      961 cgaattcaag atgcgcgtgt cgggaatttt ctcgaccgat caaacgacga tggaaaactc
     1021 gggcgcgatg aacttcttcg agccaccgcc ggaagagttc gagcgaatag tgagccgctg
     1081 accatcgccg ccagattcaa attcccacgc tccgactttt ggtttaagca cctttgacaa
     1141 aggcgagtag tgtcgtaact cgccctcgct ctgtgtctct gtgaaatgtt ctgggtctct
     1201 ggggtggatg ttttgcgcag gacatttttc accacagagt caccgagaac acacagagac
     1261 actgagaaat caaaaccctt ccgcaccaaa ttgcgcgctt cacccctcat tactcaccat
     1321 tggccacaca acggcgattt tcgaatgtga tttgtttttg cgcgcaatcg gatcggcgct
     1381 aagcttaccg cgccatgcac cgcgagcgcg cacttaactc aaccccggca aagtggattc
     1441 tgattggcct tggttgggtg gcgttcgcac ttttcttcgc cagcgaaatc ataatcagga
     1501 gggctaacgc cggctttccg ccgaacattc aacgggccgt ggtgatctgg ctgatctgcg
     1561 ccggtctttg gtttgctgtc acaccgctga ttctcgggtt agctcgccgt tttccgattg
     1621 accggcaaag atgggtcggc agcggcctaa tccacctcgc cgtcagctgc ctgatctcat
     1681 ttgtgctgct gggaatctat accgcgatca cgtcggccct cggtcttggt gaggcaagac
     1741 agtcgttgtg gcaggcattc cgcgcgcagc tcgtggggag cttccatgcc gaggtactca
     1801 cctattggat ggtgattggc ctcagtcatg tgatcgatta ctaccgcaaa tatcgtgaac
     1861 gtgagttgcg cgcttcccaa ctggaagtca ctctgtccca ggcacggctc gacgcgctgc
     1921 gaatgcagct ccatcctcat ttcctcttca atacacttaa ctcgatatcg gtgctcatga
     1981 gcgaggatgt gacggccgcg cgtcgcatgc ttaccagact cagcgatctg ctgcgagcca
     2041 gtctcgataa cgctgcgacg cacgaagtct cgttaagaga agaacttgag tttctgaata
     2101 actatctgca aattgaacag acgcgctttc acgatcggtt gacggtcaga atggatatcg
     2161 acccggccgt ccttaccgcg accgtgccca atctgatctt gcagccgctg gtcgaaaacg
     2221 cgattcggca cggcattgcg ccacgggcgc agccgggagt gatcgacatc tccgcgacgc
     2281 gcgagaacg
//
LOCUS       DATDBY010000093         2771 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_735969, whole genome shotgun sequence.
ACCESSION   DATDBY010000093 DATDBY010000000
VERSION     DATDBY010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2771
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_735969"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..609)
                     /locus_tag="VIT19_01805"
     CDS             complement(<1..609)
                     /locus_tag="VIT19_01805"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HEY5837738.1"
                     /translation="MKAIVYHEHGSADVLKLEDVEKPVPKDDQVLIKVRAASINPLDW
                     RLMRGEPKFIRVMVRLMPGLQRGRPGVDVAGEVVATGKDVKKFKVGDAVFGSCAGALA
                     EYTCSGEAKVTFKPDEVTFEQAASINVAGLTALQGLRDKAKLQRGEKVLINGAAGGVG
                     TFAVQIAKHLGARVTGVCSTRNVEMVRSIGADTTIDYTKEDFV"
     gene            1125..1880
                     /locus_tag="VIT19_01810"
     CDS             1125..1880
                     /locus_tag="VIT19_01810"
                     /inference="COORDINATES: protein motif:HMM:NF019126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HEY5837739.1"
                     /translation="MINPYLGEVTVFAFNFAPAGWIACQGQLLSIAEFPTLFSVIGNN
                     FGGDGVSTFGLPNFSSLTDEGGQYCMSLFGTAPTVKRDALPGELALLPYNPPPSWINC
                     DGQLLQVSEYPSLFQILCTAFGGDGTTTFGLPDLRSAPPLLPKGQGGAPPLPPSIYSI
                     ANVPSGSTAEGILAEVKLFPSACPPNKWSTCDGQLLPVGSNTGLFSLLQTTYGGDGQT
                     NFALPDFSKLSPPGLQYFICTSGVYPSHPQVDE"
     gene            complement(1974..>2771)
                     /locus_tag="VIT19_01815"
     CDS             complement(1974..>2771)
                     /locus_tag="VIT19_01815"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5837740.1"
                     /translation="LIGSVAGGVLAQQTNLGVPYLVRAGLLGINFLVALLLMKDLGFK
                     PASGRNPAREIKKILKNSVKYGLRNPRMRWIMLASPFTGGITIYAFYAMQPYLLELYG
                     DKSAYGVAGLAAAIVAGAQIAGGLLVPYLGKLFRRRTSVLLVCEALSVVVLTAVGLVP
                     NFWVVVVLLVLWGLMFAAVMPIRQAYLNALIPSEQRATVLSFDSLFSSAGGVVFQPVL
                     GKVADVWSYPASYVVSAGIQALSIPFTWLARREKASADVIKADAAGH"
BASE COUNT          591 a          830 c          736 g          614 t
ORIGIN      
        1 cacgaaatct tctttcgtgt agtcgatggt cgtgtcagcg ccgattgagc gcaccatctc
       61 gacgttacgc gtgctgcata cgccggtcac tctcgcgccc aggtgcttcg caatctgcac
      121 ggcaaacgtg ccgacgcctc cggcggcccc gttgatcagc accttctcgc cgcgttgcag
      181 cttcgcctta tcgcgcagac cctgcaatgc cgttagaccc gcgacgttaa tcgacgccgc
      241 ttgttcaaac gtaacctcgt caggcttgaa tgtgaccttc gcttcgcctg aacacgtgta
      301 ctcggcgagc gcccccgcac aactgccgaa cactgcgtca cccaccttaa acttcttgac
      361 gtccttcccg gttgccacaa cttcacccgc tacatcaacc cccggccggc cgcgctgtaa
      421 gcccggcatc agtctgacca tcacccgaat gaacttcggc tcgccccgca tcagacgcca
      481 atcgagcgga ttgattgacg ctgcgcgcac tttgatcagt acttgatcat ccttggggac
      541 gggcttttcg acgtcttcca gcttaagcac gtccgctgaa ccgtgttcgt gatagacgat
      601 tgctttcatt gcgttgtgaa cggtgtcggc accgatgagc ggttgaaggt cataaagaac
      661 ttggcgcctg aggcgcagca catggcggta agcctctggc ttaccggaaa cgctgaatag
      721 attttctgga ggctctgcct ccagctctga ggcgtagcct caccgaacaa tgactaaagt
      781 ctgtctcgga aagccgtagg ctttccgcca tgcgcggtgg caagccacga atggcgccga
      841 tcattgagct ggattgaggt acgtatgggc ggaagctaaa gttctggagg cttgcgagct
      901 gacctggcct gccatgcatg gttttgattt cgtcacacag ctccgtcttt aatcaaatgg
      961 gtcggcgcct tttctcaccg cgccagccag gtggaaggga attgaaagcg cttgaatacc
     1021 tgaactcatt caatcattga ccgtgggcac ctgcgagagt aagctcccgt tcgcttttga
     1081 ccgatggagc tgttgtaggt cttgtcacct tcgagggggt ctcgttgata aatccgtatc
     1141 ttggtgaggt cacggtcttt gcttttaatt tcgcgccggc cggttggatc gcgtgccagg
     1201 ggcaactcct gtctatcgcc gaattcccca cattgttttc cgtgattgga aataacttcg
     1261 gcggcgacgg cgtctcaacc tttggcttgc cgaatttcag cagcctcacc gacgagggcg
     1321 gacaatactg catgtcactg ttcggcaccg cgccgacagt taaacgtgac gcccttcccg
     1381 gcgagctcgc gctgcttccg tacaacccgc cgccgagttg gatcaattgc gacggccagc
     1441 tccttcaggt atcagaatac ccatcactct ttcagattct atgtactgca tttggtggtg
     1501 atggcactac cactttcggc cttccggatc tgagatctgc gccgccgctg ttaccaaagg
     1561 gtcagggagg cgcgcctccg cttccaccat caatctactc aattgccaac gtgcccagtg
     1621 ggagcacagc tgaaggcatt ctcgccgagg tcaagctgtt cccctcggcg tgtccaccga
     1681 acaagtggtc gacgtgtgac ggccaactgc taccggtggg aagcaacact gggctgtttt
     1741 ctttgctaca aacaacctac ggtggcgatg gacagacaaa ttttgctctg cctgatttca
     1801 gcaaactctc gcccccgggg ctgcaatatt ttatttgcac gagcggggtg tatccgtcac
     1861 atccgcaggt cgatgagtaa ctagcgaatc gccggtcgta cattgatctt ttgaatctgg
     1921 gtactctatc caggttttta atagcgtcgg gtgagatcgc tttccatgcc gggctagtgc
     1981 cccgcagcgt ccgccttgat tacatcagcc gaagcctttt ctcggcgtgc cagccaggtg
     2041 aagggaatcg agagcgcttg aatacctgca ctcacgacgt aagatgcggg ataactccac
     2101 acatcggcga ctttacccag caccggttga aacaccacgc ctcccgccga gctaaacagc
     2161 gaatcgaatg acaaaacggt cgcgcgctgc tcagacggaa tgagggcatt gagataggcc
     2221 tggcggattg gcatgaccgc ggcgaacatc aggccccata ggaccagcag gacgacaacg
     2281 acccagaagt ttggcaccag acccaccgca gtcagcacga caacgcttag cgcttcacaa
     2341 accagcagca ccgaagtgcg ccgccgaaaa agttttccca gatacgggac caacaaaccg
     2401 ccggcgattt gcgcgccggc tacgatcgca gccgcaagtc ccgcgacgcc gtaggcggat
     2461 ttgtcgccat agagttcgag caggtaaggc tgcatggcgt agaacgcata aatcgtgata
     2521 ccgccagtga acggcgacgc aagcataatc catctcatcc gtggattccg gaggccatat
     2581 ttaaccgagt tcttcagaat ctttttgatt tcacgagccg ggtttctgcc gctggcgggc
     2641 ttgaacccga gatctttcat caacagaagc gcgaccaaaa aattgattcc cagcagcccg
     2701 gcgcgcacaa gataaggaac gcccaggttt gtttgctgtg ccagcacgcc gcccgcaacg
     2761 gaaccaatca g
//
LOCUS       DATDBY010000094         4452 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1752716, whole genome shotgun sequence.
ACCESSION   DATDBY010000094 DATDBY010000000
VERSION     DATDBY010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4452
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1752716"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..496)
                     /locus_tag="VIT19_01820"
     CDS             complement(<1..496)
                     /locus_tag="VIT19_01820"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEY5837741.1"
                     /translation="MNKEPDSDKSYGSVSRRSGAYLIDCAVMTTAFVILQTFLFLPLR
                     QRLIGSDEWLMAGGVPLEIYTLLTISLPTWLYFAWSDQSSWQATIGKRVFRLIVTDIK
                     GNRIGFGRAMLRTVIKLLPWEVSHLTVNLPTSIMFDPEPKFRFGFFVVFALLVLYPAL
                     ILLTR"
     gene            790..4071
                     /locus_tag="VIT19_01825"
     CDS             790..4071
                     /locus_tag="VIT19_01825"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5837742.1"
                     /translation="MSRKLFALGLCLSFLMSGLLPGLRAQQPTPSPTPAPEQPKTQEE
                     RKQAEQKKEEKWDVEADHGPTTTVEFDTDEGTWMSCDVSPDGQQVVFDLLGDIYQMPI
                     SGGPAQLLAGGRAWEAQPRYSPDGKWIAFTSDRDGGDNIWLMDTAGQKRRQITKETQR
                     LTNTPAWTPDGQYVVVRKHFVDQRSLGAGEIWMYSINGGSGLQLTEKSSWTANVGEPA
                     FDPKGRFVYFVNSGDFDYNKNVYGSIYWIERYDTQLGRRAVFIRGTGGAIRPQPSPDG
                     KYLAFIRRDRLKTVLYLREIESGREWPIYDKLTRDQQETWSVFGTYPGYAWTPDNQSI
                     VITAGGKFVRVNVGTKQATPLPFTARISQKVTEAVRFPQKVAPARDNARLLRWARKNG
                     DHIIYNALGKLYIKEGASAPRVLLKTNDLEYAPKFSADGRRITFVTWSDAEKGAVWIA
                     ESDGSNARKITTAGDQYANPTFSPDGTKVAYLKGRGSINRGEDLSSESAFEIHYWDGA
                     TSRYVMDVQSRGSNARMPVLNFDPKGERIYFMESPPVPAPPGAPANILTYLSSVKLSG
                     DDYKRHVEAKFAAEIVPSPDMKWVFFKELHKLYLAPFPQTGKLLKLNSGESILPVKTV
                     SQDSGDWLAWSPDSKTAQWTLGENFYEQGIANVVKEAAKDEKPSAPMATKIGFEFETA
                     RPRGLVALTNARIITMKGDEVIERGSILIEDNRIKAIGARIQIPANARRIDMTGKTIM
                     PGLIDVHAHMGYNTLDITPEKQAPYYANLAYGVTTTHDPSASTQSVFAQSEMVKAGVM
                     VGPRIYSTGFILYGAENAEKATVKNLEDAKRHLTRLQADGAFSVKSYNHLRRDVRQMI
                     IKAARDTRMMVVPEGGSTFFYNMNMILDGHTGIEHAVPVAPFYKDVVTLFARSRTAYT
                     PTLIVGYGGIWGENYWYQHTKVWENEKLLRFVPRDDVDARSRRRLMVPEDDFYHFDLA
                     RSVRDVVRAGGKAQLGAHGQLQGLGAQWELWMLQQGGLTPMEALRCATLYGAQYLGLD
                     GDIGSLEPGKLADLVVLDKNPLQNIRNSESIRNVMINGVLYETDNMNEVYPEARPRRK
                     FFWER"
     gene            complement(4098..>4452)
                     /locus_tag="VIT19_01830"
     CDS             complement(4098..>4452)
                     /locus_tag="VIT19_01830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837743.1"
                     /translation="RTNYLFQDISGLLDPRIGRGFYHTFHAKYPFLRFPLDHFFHSNH
                     FRLVEFSRLAYFGSDHFPVYIKLSYEPSAESQQEELQADASEQEEAREKIKQAKVNFS
                     LNLRPNWFREPARDL"
BASE COUNT         1050 a         1299 c         1287 g          816 t
ORIGIN      
        1 ggcgcgtcaa caatatcaat gcgggataga ggacgaggag agcaaacacc acaaagaatc
       61 caaaccgaaa cttaggttcg gggtcgaaca taattgaggt tggaagattg acggtaagat
      121 gagagacctc ccagggaagc agcttaatta ccgtgcgcag catggctcgt ccgaaaccga
      181 tacgattgcc tttaatatcg gtgacgatta gacggaacac tcgctttccg atagtagctt
      241 gccagcttga ttggtcgctc caggcgaagt aaagccatgt aggcagagag atggtcagga
      301 gagtatagat ttcgagagga actcctccgg ccattaacca ctcatctgat ccaatcaacc
      361 gttgtcgcag cgggagaaat aagaaagttt gaaggatgac aaaggcagta gtcattactg
      421 cacagtcaat caggtaagct ccagaccgac gactaacact gccataggac ttatcgctat
      481 caggctcttt attcatagcc acggcacaga ggaattaaat gcgactactt tggtaatgag
      541 tagtggcata ggcgcagggt tgatcgggcg gcgcccagca tttcaacatt cgccgcacaa
      601 atcaagttgc caaaaacgct cgcgtcgcgc cgcccccagg agattgttta gcccagcttg
      661 gcaacacggg cgcgcttgac agaccacatg ctcggcgtcg aacatgcgcg agctaaacaa
      721 ccgcgccgct ggagctaccg gcggctggct caattcgcca ttgctatccg tcaaaacgag
      781 gtgaaaagaa tgtcacgcaa attattcgcg ctgggcttgt gcctgtcctt ccttatgtct
      841 ggccttctgc cggggttacg tgcgcagcaa cctacgccat ctcccacgcc cgcaccggag
      901 caaccaaaga cgcaggaaga gcgcaagcag gccgagcaga agaaggaaga gaagtgggac
      961 gttgaagccg atcacgggcc gaccacgacc gttgagttcg acacggacga gggcacctgg
     1021 atgagttgcg atgtttcgcc cgacggacaa caggtcgtct tcgatctgct cggtgacatt
     1081 tatcaaatgc cgatcagcgg tggaccagcg cagttgctcg cgggcggccg cgcatgggaa
     1141 gcgcaaccgc gctacagtcc cgacggcaag tggatcgcct tcacctccga tcgagatggc
     1201 ggcgacaaca tctggctgat ggacacggcg ggccaaaagc gccggcagat cacgaaagaa
     1261 actcaacggc tcacgaacac ccccgcctgg acgcccgacg gtcagtatgt agtcgtgcgc
     1321 aagcacttcg tcgatcagcg ttcgctgggt gccggtgaaa tctggatgta cagcatcaac
     1381 ggcgggtcgg gtttacaact gaccgagaag tcgagctgga cggcgaacgt cggcgagccg
     1441 gcgtttgatc caaaaggtcg cttcgtctac ttcgtcaata gcggagattt cgactacaac
     1501 aagaacgtct atggcagcat ttactggatc gagcgttacg acacgcagtt gggtcgccgc
     1561 gccgtcttca tccgcggcac cgggggcgcg attcgcccac agccctcgcc cgacggtaag
     1621 tatctcgcct tcattcgtcg cgatcggttg aagaccgtac tttacctgcg cgagatcgag
     1681 tcggggcgcg agtggcctat ctacgacaag ctcacgcgcg atcagcagga gacctggtct
     1741 gtctttggca catatcccgg atacgcctgg acgccggaca atcagtcgat cgtcatcacg
     1801 gcgggcggca agttcgtccg cgtaaacgtc ggcacgaaac aggcgacgcc gcttccgttc
     1861 actgcgcgca tcagtcagaa agtgactgaa gcggtgcgtt tcccgcagaa agttgcgccg
     1921 gcgcgcgaca acgcgcggct cttgcgctgg gcgcgcaaga acggcgacca catcatctac
     1981 aacgcgctcg gcaagcttta catcaaggaa ggcgcgagcg cgccgcgcgt gctactgaag
     2041 accaacgacc ttgagtacgc gccgaagttc agcgctgacg gtcgacgcat cacgttcgtc
     2101 acctggtccg acgcagagaa gggagcagtt tggattgcgg aatctgatgg ctcgaacgcg
     2161 cgcaagatca ccactgcggg cgatcaatat gctaatccaa cgttctcgcc cgatggcacc
     2221 aaggtcgctt acttgaaggg gcgcggcagc ataaaccgtg gcgaagactt atcgagcgag
     2281 tcagcgttcg agattcatta ctgggacggc gcgaccagcc gctacgtgat ggacgtgcag
     2341 agccgcggct cgaacgcgcg catgcccgtg ctcaatttcg atccgaaagg cgagcgcatc
     2401 tacttcatgg agtctccgcc ggtgcctgcg ccgccgggcg cgcccgccaa catcctgacc
     2461 tacctgagca gcgtcaagct ctcgggcgac gactataagc gacacgtcga agcaaagttc
     2521 gccgcggaga tcgtgccctc gcccgacatg aagtgggtct tcttcaaaga gctgcacaag
     2581 ctctatctcg cgccgtttcc gcagacaggg aaactcttaa agctcaactc cggcgaatct
     2641 attctgccag tcaagaccgt gtcacaggac tcaggcgatt ggctcgcgtg gtcgcccgac
     2701 agcaagacgg cgcagtggac gctcggagaa aacttctacg aacaggggat agccaacgta
     2761 gtgaaagagg cggccaagga tgagaaaccg tctgcgccca tggcgacgaa gataggcttt
     2821 gagtttgaga cggcccggcc gcgcgggctc gtcgcgctca ccaacgcgcg catcatcacc
     2881 atgaagggcg acgaggtaat cgagcgcggc tcgatcctca tcgaagacaa tcgcatcaag
     2941 gccatcggcg cgcggataca gattcccgct aacgcgcgcc gaattgacat gacggggaag
     3001 accatcatgc ccggcctgat tgatgtgcac gcccatatgg gctacaacac cctcgacatc
     3061 actcccgaaa agcaggcgcc ctactacgcc aacctcgcct acggcgtcac gaccacgcac
     3121 gacccttcgg cctcgaccca gtcagtcttt gcgcagtcag agatggtcaa ggccggcgtc
     3181 atggtcgggc cgcgtatcta ctcgaccggc ttcatactct acggcgctga gaacgccgag
     3241 aaggcgaccg tcaaaaacct ggaagacgcc aaacgccacc ttacgcgatt gcaggccgac
     3301 ggcgcgttct ctgtcaagag ttacaaccac ctgcggcgcg acgtccggca gatgattatc
     3361 aaggcggccc gcgacacccg gatgatggtc gtgcccgaag gcggatcgac cttcttctac
     3421 aacatgaaca tgattcttga cggacacaca ggcatcgagc acgcagtgcc cgtcgcgcct
     3481 ttctacaaag acgtggtcac gctttttgcc cgcagccgca cggcatacac gcccacgctc
     3541 atagtcggct acggcgggat ctggggcgag aactactggt atcagcacac gaaggtctgg
     3601 gagaacgaaa aacttctgcg cttcgtcccg cgtgacgacg tagacgcgcg ctcgcggcgc
     3661 cggctgatgg tccccgaaga cgacttctat cacttcgatc tggcgcgctc tgttcgtgac
     3721 gtagtacgcg cgggcggcaa ggcgcagctc ggcgcccacg ggcaactgca gggtctcggc
     3781 gcgcagtggg aactctggat gctgcaacag ggcggcttga cgccgatgga agcgctgcgc
     3841 tgcgccacgc tctacggcgc gcagtacctc ggcctggacg gcgacatcgg ctcgctcgaa
     3901 ccaggaaaac tcgccgacct tgtcgtgctg gataagaacc cgctacaaaa cattcgtaac
     3961 agcgagtcaa tccgcaacgt gatgatcaac ggcgtgctct acgaaacgga caacatgaat
     4021 gaggtctacc ccgaggcgag gccgcgccgg aagtttttct gggagcgtta gcttaccggc
     4081 tcctgacatg tagatactta taagtcgcgc gccggctccc ggaaccaatt ggggcgaagg
     4141 ttcagagaga aattcacttt cgcctgcttg attttctccc tggcctcttc ttgttctgat
     4201 gcatcagctt gtaactcctc ctgctggctt tccgcagaag gctcataact aagttttatg
     4261 tagaccggaa aatgatccga gccgaaatac gcgagccggc tgaactcgac cagcctaaag
     4321 tggtttgaat ggaagaagtg gtctaaagga aatctaagga aaggatactt cgcgtgaaag
     4381 gtatgataaa aaccacgccc gatacgagga tccaacaagc cgctgatgtc ctggaacagg
     4441 taattcgttc gc
//
LOCUS       DATDBY010000095         2455 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2166782, whole genome shotgun sequence.
ACCESSION   DATDBY010000095 DATDBY010000000
VERSION     DATDBY010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2166782"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /locus_tag="VIT19_01835"
     CDS             <1..780
                     /locus_tag="VIT19_01835"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5837744.1"
                     /translation="RLERTLLPAMLWPLRQWDLRAARQPNYYIANSRLVADRIKKIYG
                     REAHVIPPPIDVNRFHMSNEIDDYYLVLSRLMPYKRIDLAIEACKRMNRRLIVIGDGP
                     DRKRLESLADDRIEFLGRQPDKIVNYYAARCRALLFPGEEDFGMAPLEANAAGRPVIA
                     YRAGGAVETVEENVTGVFFDQPSSVSLGEAIEKFEGTRFDQYTLRRHAEKFDRSVFTF
                     RVLQFLGSVAPSSCSPELLTGARLLSENISRRVWPRLALVG"
     gene            785..1834
                     /locus_tag="VIT19_01840"
     CDS             785..1834
                     /locus_tag="VIT19_01840"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEY5837745.1"
                     /translation="MQTALIGDVETAGRPHRASSVAEREVAAASQLRSDEREHALPFL
                     VQAEPSNTSLVEWIASHRDELDAKLLTHGGMLFRGFGMESAGQFEEVIGTVSGRLLDY
                     TYRSTPRTIVSGKIYTSTEYPPHQTIPLHNENSYTRDWPMKIWFFSRICATSGGETPI
                     ADSRRVYQRIPREVRERFERKGVMYVRNYGSGFDLPWQEVFQTRDRAEVEKFCRKLEM
                     QFEWLPNDHLRTRQICQAVASHPVTGEIVWFNQAHLFHVSRLPEEVRDAMLTIFAEEE
                     LPRNVYFGDGAAIDSADLDLICEAYEQEKVAFQWEQGDVLLLDNMLTAHARNSFTGKR
                     QVVVGMAEPHSAIRI"
     gene            1919..>2455
                     /locus_tag="VIT19_01845"
     CDS             1919..>2455
                     /locus_tag="VIT19_01845"
                     /inference="COORDINATES: protein motif:HMM:NF013786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HEY5837746.1"
                     /translation="MRQVVSSPASEWLAGPASPAIENDQVHVWKVDLPATVPDVRLLS
                     RDEHERAARFHFEKDRQHFKAARSALRIILGRYLNLPPESLEFAQTEYGKPFLTNLEA
                     AGVLFNLSHSGEVALMAVAREREVGVDVEFMRADFATTEVAEHFFSMAEIYTLSGLEP
                     HLRTQAFFNCWTRKEAYVK"
BASE COUNT          516 a          678 c          738 g          523 t
ORIGIN      
        1 cgacttgagc gcactttgtt gccggcgatg ctttggccgc tgcgacaatg ggatttgcgt
       61 gccgcgcgtc agccgaacta ctacatcgcg aactcgcgcc tggtcgcgga ccggatcaag
      121 aagatttacg gccgtgaagc ccacgtcatc ccaccgccaa tcgatgtgaa tcgatttcac
      181 atgtcgaatg agatcgacga ttactatctc gtcctgtcgc gtttgatgcc ttataagcgt
      241 atcgacctgg cgattgaagc gtgcaagcga atgaaccgcc gcctgatcgt gatcggcgat
      301 gggccggatc gaaaacggct ggaaagcctc gcggacgatc gcattgagtt cctgggccgc
      361 caacccgaca agatcgtgaa ctactacgcc gcccgctgcc gcgcgctgtt gtttcctggt
      421 gaagaagatt tcggcatggc gcctctggaa gcgaacgcgg ccgggcgacc ggtcattgcg
      481 tatcgagccg gcggcgcggt tgaaaccgtt gaggaaaatg tgaccggcgt ctttttcgat
      541 cagccaagca gtgtttcgct cggcgaagcg atcgagaagt ttgaagggac gcggtttgat
      601 caatacacgc tgcgccgaca cgccgagaaa tttgaccgct cggtattcac atttcgcgtg
      661 ctgcaattcc tgggttcggt cgcgccgagt tcatgttcgc cagagctgct caccggtgcg
      721 cgtctgctct cggagaacat ttccagacgc gtgtggccgc ggctggcgtt ggttggataa
      781 tcgaatgcag acggctttga ttggagatgt ggagacggca ggtcgcccgc accgcgcgag
      841 ttcggtcgcg gaaagggaag tggcggctgc gtcccaactg agaagcgacg agcgggagca
      901 tgcgttgccg tttctggttc aagctgaacc gtccaacaca agcctcgttg agtggatagc
      961 ttcgcatcgc gacgagttag acgcgaagct cctgacgcat ggcggcatgc tattccgcgg
     1021 ctttgggatg gaatccgccg gccagttcga agaggtgatc ggaaccgttt ccggccgatt
     1081 gcttgattac acatatcgtt cgacaccacg gacgatcgtc agcggaaaaa tctacacttc
     1141 cactgaatat ccgccgcacc agacgattcc gctgcacaac gagaattcct acacgcgcga
     1201 ctggccgatg aaaatttggt tcttcagccg catctgcgcg acaagcggtg gcgaaacgcc
     1261 gatcgccgac agccgccgcg tctatcaacg cattccgcgc gaagtgcgcg agcggtttga
     1321 acgcaaaggc gtcatgtacg tgcgcaacta tggcagtggg tttgatctcc cgtggcagga
     1381 agtcttccag acacgcgacc gcgcggaggt ggaaaagttc tgtcgaaaac tagaaatgca
     1441 gtttgaatgg ctgcccaacg atcatctgcg cacccggcag atttgtcagg ccgttgcgtc
     1501 gcacccagtc accggcgaaa tcgtttggtt taatcaggcg catctctttc acgtgtcgcg
     1561 actgcccgaa gaagttcgtg acgcaatgct gacgatcttt gctgaagagg agttgccccg
     1621 caacgtttac ttcggcgacg gcgcagcaat cgactcagcc gatctggatc tcatttgcga
     1681 ggcgtacgag caggagaagg ttgcgtttca gtgggaacag ggcgatgtgc tgttactcga
     1741 caacatgctg acagcgcacg cgcgcaattc gtttaccggc aagcgccagg tcgtagtcgg
     1801 catggctgag ccgcacagcg caataaggat ctagcgcaac ccgatggatc ggggttgaat
     1861 aggcgcaatt tacaacttgc gatacaagtg actaatgcca ggatttggaa caaaaccagt
     1921 gcgacaggtt gtcagctcgc ctgcgagcga gtggctggcc ggccccgctt cgccggcgat
     1981 tgagaacgat caagtccacg tctggaaagt cgacctgccg gcgacagtgc ctgatgtgcg
     2041 tctgctttcg cgtgatgaac acgagcgagc ggcgcgattt cattttgaga aagatcgtca
     2101 gcacttcaag gccgcgcgtt cggctcttcg catcattctc ggccgttacc tgaatctgcc
     2161 gcctgagtcg ctggaatttg ctcagactga atacggcaag cctttcctca ctaaccttga
     2221 agcggcgggt gtgctcttca acttgtcaca ttcaggagag gtcgccctga tggccgtcgc
     2281 gcgcgagcgg gaggtcgggg tggatgttga atttatgcgc gctgacttcg cgaccaccga
     2341 agtcgccgaa cacttctttt caatggccga gatttacacg ctgtccgggt tggagccgca
     2401 cctgcgcacc caggcatttt tcaactgctg gacgcgcaag gaagcttacg tgaag
//
LOCUS       DATDBY010000096         5036 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1121224, whole genome shotgun sequence.
ACCESSION   DATDBY010000096 DATDBY010000000
VERSION     DATDBY010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5036
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1121224"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VIT19_01850"
     CDS             complement(<1..203)
                     /locus_tag="VIT19_01850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837747.1"
                     /translation="MARTSASPLAVRSFPQPSRTAERAFANTVKLLPSWIYLAMIIIA
                     AAAICVTVNFRGHTQLNAAERQFR"
     gene            961..3000
                     /locus_tag="VIT19_01855"
     CDS             961..3000
                     /locus_tag="VIT19_01855"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY5837748.1"
                     /translation="MKAIKVAERGLTLVAGGLFNAIQAVNKYKPNPSFTPKWSDKPLL
                     KSWQKTKPTLGWPRTTDSLCPNCVIEAREQILSGEKDVSVLINEKVGEIKAQIIERDG
                     EIWMIKDCPIHGSFEDMMAIDSKFLTHIEAMFPGRDIQSHNDEKLHNHGSSTIKYGRG
                     AVLTVDLTNRCNMMCDPCFMDANQVGFVHELSMEDIREILDNAISIKPRRQMSVQFSG
                     GEPTISPHFIEAIRYSRKVGYNSVQAATNGIEFAKSKEFCRQAAEAGLRYVYFQFDGV
                     GNDANSHRQVGNLFDVKLRAINNLHEAGVEIVLVTTLVNGINNDQVGSIIRFALDNPK
                     KIAFLSFQPVSFTGRDEAITPERRLQQRYTLSHLAHDVKNQVGITEPTRDWFPLSLMG
                     AFADFADLVHGPDSDWGQVSCGCHPNCGVGTAVMIDKETKEMSPVPAFLNIPGLVKDM
                     RKITDAARGKWKSNFMMGLALLKHYQPFAAPSQFNLYELFKKFDKSFGLTGKDYGKVD
                     GNRSHDDIEKRRSDRWNFLFIAGMWFQDLFNYDFRRTEMCIIPYGTQEGEISFCAYNT
                     GIGWRNIIEHMHQNATVAKWYDEHGRHEIFAGGKAVPMADQTHNLKLNDVDLARPNKP
                     QMEGPKTAHEEKVMMRKLYQDMVLKQQQITKADNGDKPVQIQGLNGKKSAAVVTV"
     gene            3138..3344
                     /gene="rpsU"
                     /locus_tag="VIT19_01860"
     CDS             3138..3344
                     /gene="rpsU"
                     /locus_tag="VIT19_01860"
                     /inference="COORDINATES: protein motif:HMM:TIGR00030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEY5837749.1"
                     /translation="MAVVNVNPGESIESALRRFKRKVMTEEIIKDAKKHAFFMPPGQK
                     AKLKSALARKRNKKKARPRPRPTN"
     gene            3476..4243
                     /gene="surE"
                     /locus_tag="VIT19_01865"
     CDS             3476..4243
                     /gene="surE"
                     /locus_tag="VIT19_01865"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: protein motif:HMM:NF001490.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEY5837750.1"
                     /translation="MTRILITNDDGIHSDGLGTLERALRELGDVYVIAPASEMSGASH
                     SLTLARPLRIRQIDSRHWTVDGTPTDCVTLALHKILGEDELPHVCVSGINHGGNLGDD
                     ATYSGTVAGALEATILGVPGLAVSLVARENFDFAEAARFAVLATRKILSEGLPEGTLL
                     NMNVPQGEIKGVRVTRQGIKNARPVITEHIDPRGKPYFWIGEQYFRSNAEGGTDYRAI
                     EEGYVSITPLKSDMTDHALLSSLDSWSYLASVEMLQS"
     gene            4260..4937
                     /locus_tag="VIT19_01870"
     CDS             4260..4937
                     /locus_tag="VIT19_01870"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: protein motif:HMM:NF001453.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEY5837751.1"
                     /translation="MSFSSQTTTLKAEYRIPRERMVERLRDHYGIKDEKVLNAMLTVP
                     RHFFVSQALQGTAYGDHALPIDFNQTISQPYIVGRMTELLELDKKSRVLEIGAGSGYQ
                     TAVLAQIASQVFAIERIGELARQAHARLREFGIYNATVKSFDGTLGWKAHGPYDAILV
                     AAGGPVVPDPLVSQLQIGGRLVIPIGETRESQKLVRVIKTETSHKTEEHGACQFVPLI
                     GQHGWST"
BASE COUNT         1217 a         1342 c         1411 g         1066 t
ORIGIN      
        1 cgaaactgcc gttcggctgc atttagctgc gtgtgccctc ggaagttcac ggtcacgcaa
       61 atcgccgccg cagcgataat gatcattgcc aggtaaatcc acgatggaag cagcttgacc
      121 gtattcgcaa acgcacgctc cgctgtccgc gagggttggg ggaacgaccg aaccgcgagt
      181 ggcgatgccg aggtgcgggc cactaagtat cggctgttaa gccaggaaga atttgctggg
      241 tggttcaaat gacacctccg attacgtgtt tttaaggttt tgcttttgcg tccgttcggc
      301 ttcgctgcgg cgccgatcgg ccgtctacta tcgtcgccaa gactctggcg gttaccccgg
      361 ttcgaaactg tcgacgctga gtgcagactc gcaacgaagc catctttcgt ctaacagtca
      421 ctcttgatcg agacgccaat tttccggttg agggactcat aggctgcgta ttcattgatt
      481 tctcgactcc cgctgtggac tgaaaaccct tgttttgcac aatatacagc gtttacaact
      541 taagcggccg caacatccgg tggtacttcg tcggccaatc cccttgcgac tcaatgattt
      601 agcgcaagtg gcgtcgaatg taacagcggt ttaacagagg cgcaatacca ttttactgca
      661 acaagttagc aacgtaacct caacgtttac atcaggtaac ggcgattaag cgcttaattc
      721 ggcgaacgcg cggcgaacgg aaatggagtg aacacatatt gcccagcttc ggagggccgt
      781 gttgacacgt gtgggctctt atgggattta tgacacacag ggcgagctcg ttactggggt
      841 ggagcggcgg taataacacc agtgttgaca gtgagttagg tcatttcgta agcgaggcac
      901 gcatgttgcc gatggtttcg ctggtattcg tgtacacacc cctaacggag attcgattag
      961 atgaaagcaa tcaaagtcgc tgagcgaggc ttgacgctgg tagctggtgg gctgttcaac
     1021 gccatccagg ccgtaaacaa gtacaagcca aatccttctt ttaccccgaa gtggtcggac
     1081 aagccgctgc ttaagtcctg gcaaaaaacc aagcctacct taggttggcc gagaacgact
     1141 gactcgctct gcccgaattg tgtcatcgag gcgcgtgagc aaatcctgag cggcgagaag
     1201 gatgtgtcgg tgctcatcaa cgagaaggtt ggtgagatca aagcacagat tatcgaacgc
     1261 gatggcgaga tttggatgat caaggattgt ccaatccacg gtagttttga agacatgatg
     1321 gcaatcgact cgaaattcct cacgcatatc gaggcgatgt tccccggtcg agacatccag
     1381 tcccacaacg acgaaaagct gcacaaccat ggctcgagca cgatcaagta cggccgcggc
     1441 gccgttctta cggtcgatct gacaaatcgc tgcaacatga tgtgcgaccc atgcttcatg
     1501 gacgcgaacc aggttgggtt cgttcatgaa ctgagcatgg aagatattag agagattttg
     1561 gacaacgcga tctcgatcaa accgcgtcgc cagatgtctg tgcagttctc cggcggcgaa
     1621 ccgacgatct ccccgcactt catcgaagcg attcgatact cgcggaaggt tggatacaac
     1681 tcggtgcagg cggcgactaa cggcatcgag tttgcgaaga gcaaagagtt ctgccgtcag
     1741 gctgctgaag cgggtctgcg ttacgtctat tttcagttcg acggagtcgg caacgatgcg
     1801 aacagccatc ggcaggtcgg caaccttttc gacgtgaagc tccgggcgat taataatctg
     1861 cacgaggcgg gcgttgaaat cgtactcgtt accacactcg tcaacggcat caacaacgat
     1921 caggtcggtt cgatcatccg tttcgcgctc gacaatccga agaagattgc gttcctttcg
     1981 ttccagccgg tttcgttcac gggccgtgat gaagcaatta cgccggaacg acgtctgcaa
     2041 cagcgctata cgctttcaca cctcgctcac gacgtgaaaa accaggttgg aatcaccgag
     2101 ccgacacgcg attggtttcc gctctcgctc atgggcgcgt ttgctgactt tgcggatctc
     2161 gtgcacggtc ctgactctga ttggggccag gtttcgtgcg ggtgccatcc gaactgtggc
     2221 gtcggcacgg ccgtcatgat tgacaaggaa acgaaggaaa tgagtccggt tccggcgttc
     2281 ctgaacattc ccggtctggt aaaagacatg cggaagatca cggacgcggc ccgcggcaaa
     2341 tggaagtcga acttcatgat ggggctcgct ctgctgaagc actatcaacc attcgcagcg
     2401 ccatcgcagt tcaacctgta tgagctgttc aaaaagttcg acaagtcttt cggactgacc
     2461 ggaaaagatt acggcaaggt tgacggcaat cgcagccacg acgatatcga gaagcgccgt
     2521 tccgatcgtt ggaacttcct gttcattgcg ggcatgtggt tccaggatct cttcaactac
     2581 gacttccgcc gcactgagat gtgcatcatt ccgtacggca cgcaggaagg cgagatcagc
     2641 ttctgtgctt acaacacggg catcggctgg cgcaacatca ttgagcacat gcatcagaac
     2701 gcgaccgtgg ccaaatggta cgacgaacac ggccgccacg aaatctttgc gggcggcaaa
     2761 gcggttccga tggctgacca aacgcacaac ctcaaactga acgacgttga cctggcgcgg
     2821 ccgaataagc cgcagatgga agggccgaaa accgcacacg aagagaaagt gatgatgcgt
     2881 aagctctatc aggatatggt cctgaagcaa cagcaaatca ccaaggctga caacggtgac
     2941 aagcccgtcc aaattcaagg gctcaacggc aagaagagcg ccgccgtggt gacggtctaa
     3001 acgtcgctca ttggctttga agccccgcga gtgtgaacga aaactcgcgg ggtttctcat
     3061 gtccgcttga cccgactcaa tctcagcgtg ttaaatagca ggtcggaaat tgaacagtcg
     3121 aaggaagtga tgactagatg gcagtagtga acgtcaatcc cggcgagtca atcgaaagcg
     3181 cgctccgccg cttcaagcgc aaggtgatga ccgaagagat catcaaagac gcgaagaagc
     3241 atgctttctt tatgccgccc ggacaaaagg cgaagctcaa atcggccttg gcccggaaac
     3301 gtaacaagaa gaaagcacgt ccgcggcccc gtccgactaa ttgagatcaa tcggccaatt
     3361 aaccgcaact caccagatcg atccaagcaa aactgagact ggccgtgcac gttgataaaa
     3421 cgttgcgcgg cagtctgctt gaacgaacct ggtataaaat tgagcggcca cctgcatgac
     3481 gcgcattttg atcacaaacg atgacggcat ccactccgac ggtctcggta ccctggagcg
     3541 ggcgcttcgc gaattgggcg acgtgtacgt gattgccccc gcgtctgaaa tgagcggcgc
     3601 atcgcacagt ctcacgctcg cgcggccgct gcgcattcgc cagatagaca gccggcactg
     3661 gaccgtggac ggcacaccga ctgattgtgt aactctggcg ctccacaaaa ttcttggaga
     3721 ggacgaactc ccgcacgttt gcgtctcagg catcaaccat ggcggcaatc tgggcgacga
     3781 cgcgacgtat tcggggacgg tagccggtgc gttggaagct acgatcctgg gcgttccggg
     3841 gctggccgta agtctggtag cgcgtgagaa ctttgatttt gcagaagcgg cgcgctttgc
     3901 ggtgctcgca accaggaaaa ttctcagcga aggtttgccg gagggcacgc tgctgaacat
     3961 gaacgtgccg cagggcgaga tcaaaggcgt gcgtgtcacg cgtcaaggca tcaagaacgc
     4021 gcgtcccgtg attacagaac acatcgatcc gcgaggcaag ccttactttt ggattggcga
     4081 gcagtatttt cgctcaaacg cggaaggcgg cactgactat cgagcaatcg aggaaggtta
     4141 cgtttcaatc actcccttga agagcgacat gactgaccat gccctcttgt cgtccctgga
     4201 ttcctggagc tacctggcct ctgtggaaat gctacaaagt taagacgcgc gctaacaact
     4261 tgagtttctc ttcacaaaca accacgctca aagccgagta ccgcataccg cgcgagcgca
     4321 tggtcgaacg cctgcgggat cattacggca tcaaagacga gaaggtactc aacgcgatgt
     4381 taactgtacc gcgacacttt ttcgtgtcgc aggctctgca gggaaccgcg tacggcgatc
     4441 acgctttgcc gatcgatttt aatcagacga tctcacagcc atacatcgtc gggcgcatga
     4501 ctgaactgct ggaactcgac aagaaaagtc gcgtgctcga gattggcgcg ggctcaggtt
     4561 accagacagc ggtgctggcg cagattgctt cgcaagtttt tgcgattgag cgcatcggcg
     4621 aactggcacg ccaggcccat gctcggctcc gtgagttcgg gatttacaac gcgacggtca
     4681 aatctttcga cggaacgctt ggatggaagg cgcatggccc ctacgatgca attctggttg
     4741 ccgcaggcgg accggtcgtt cctgatccgc tcgtgtcaca attacaaatc ggcggccgtc
     4801 tggtgattcc catcggggag acgcgcgagt cgcaaaagct cgtgcgcgtg atcaagaccg
     4861 aaacgtcgca caaaaccgaa gagcacggcg cttgtcagtt tgtgccgcta atcggacagc
     4921 atggctggtc aacttagtag tcagatctga acaatggatt cgctaatcga actatttcac
     4981 tacctgaaag atcttcttaa tccgaagatt attatcgaga cgttgctggt gaaggg
//
LOCUS       DATDBY010000097         3562 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1751059, whole genome shotgun sequence.
ACCESSION   DATDBY010000097 DATDBY010000000
VERSION     DATDBY010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3562
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1751059"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..340
                     /locus_tag="VIT19_01875"
     CDS             <1..340
                     /locus_tag="VIT19_01875"
                     /inference="COORDINATES: protein motif:HMM:NF016839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEY5837752.1"
                     /translation="ERAFANTVKLLPSWIYLAMIIIAAAAICVTVNFRGHTQLNAAER
                     QFRQMETEIATLGRANASLETEVLRITTEPATIESAARARLGMVRPTDVVVPLQSRSA
                     TNLASISFVR"
     gene            515..2161
                     /locus_tag="VIT19_01880"
     CDS             515..2161
                     /locus_tag="VIT19_01880"
                     /inference="COORDINATES: protein motif:HMM:TIGR00641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HEY5837753.1"
                     /translation="MPTSDTATQQPTRSPANAGERKSSFRTVSLDEVNRLYAPADVAQ
                     IDTENDIGSPGEFPYTRGIHASGYRGKLWTMRQFAGFGTPEETNLRFKYLSREGQTGL
                     SVAYDLPTLMGYDADSPLSEGEVGKCGVAVSSLADMEALFDGIDLEQVTVSQTINAPA
                     SVLLAMYLVVAEKQGADWKKISGTLQNDILKEYIAQKEWIYPIRPAMKLVIDTFEFCT
                     EQVPRYNPISVSGYHIREAGATALQELAFTLRDGIEYVDWGIRAGLDIDRFVPRISFF
                     FNAHNDFFEEIAKYRAARRIWARVMRDRFGSTSERTLKLRFHTQTAGVSLTVQQPLNN
                     VVRVAIQALAGVLGGTQSLHTDSYDEALALPTDRAALLSLRTQQIIAEESGVANTVDP
                     LGGSYFVESLTQKMEDGARDYFERIDAMGGMVEAIEKGFPQREIQDSAYQYQKALEAG
                     EQTIVGVNKFQMEQTGTEVPTLVIDESVRHHQLERLEQTRARRDKQAVVRTLDKLRHA
                     AEAGDNTMLATIEAVREYATLGEICSALRDVYGIYEEPAI"
     gene            2184..2591
                     /locus_tag="VIT19_01885"
     CDS             2184..2591
                     /locus_tag="VIT19_01885"
                     /inference="COORDINATES: protein motif:HMM:TIGR00640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HEY5837754.1"
                     /translation="MAQERKIRVLVAKPGLDGHDRGAKVIARALRDAGMEVIYTGLRQ
                     TPEMIAAAALQEDVDAVGVSILSGAHNTLCPRIVSLLREQGMNDTLVVLGGIVPQEDI
                     PKLKEQGVAEIFLPGTSTQDIAKFIRENVRPRD"
     gene            complement(2595..3359)
                     /locus_tag="VIT19_01890"
     CDS             complement(2595..3359)
                     /locus_tag="VIT19_01890"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY5837755.1"
                     /translation="MAEAETVLFETREGVAHVTMNRPGKRNALNEEIVTGLKAALRRA
                     NADESARCIVLRGAGSDFCAGADLSALQRIAQASVAENLEDAQSLAELLLLIRELDVP
                     VIAAVRGRALAGGSGLALACDLVVAERDARFGFPEVKIGFVPAMVMAILRRSASEKKA
                     FELITTGVEISADEAAQFGLVNHVFDRDVFDSELEAFAQRFVKMSRSALSLAKKLFYS
                     TDGLSFPDALAAGVDINATARMTKDCRAGIARFLDK"
     gene            complement(3368..>3562)
                     /locus_tag="VIT19_01895"
     CDS             complement(3368..>3562)
                     /locus_tag="VIT19_01895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837756.1"
                     /translation="ICKGEVERFELPNLGALNFLLHESLGGGGTLSLMTDAQGKTFST
                     ALLRMEIEVADHEGSRLGLS"
BASE COUNT          825 a         1031 c          978 g          728 t
ORIGIN      
        1 ggagcgtgcg tttgcgaata cggtcaagct gcttccatcg tggatttacc tggcaatgat
       61 cattatcgct gcggcggcga tttgcgtgac cgtgaacttc cgagggcaca cgcagctaaa
      121 tgcagccgaa cggcagtttc gtcagatgga aactgagatt gcgactctgg gtcgcgcaaa
      181 cgcgtcgctt gaaacagagg ttctgagaat cacaacggaa cctgccacca tcgaatctgc
      241 ggcgcgagcg cgcctcggca tggttcggcc cactgatgtg gtggtgccgc ttcaatctcg
      301 atcagctaca aatctagcga gtatttcctt cgtccgctaa cagcacctgc ttaaccctgc
      361 tgctctgtcc acgaagtcgg gtccttccaa tatcgcgcgg ctgcagcctt atcgcagccg
      421 cgcatccttc tttgtacaac tggcttcctg tttgacactc taaaaccgtt tcaataacat
      481 cagatttcaa tcagcacact gctattcttt tctaatgcct acgtcagata ccgcaactca
      541 gcagcctacg agatccccgg caaacgcggg cgagcgaaag tcgagttttc ggactgtgtc
      601 gctggacgag gtgaatcgcc tctacgcacc agcagacgtc gcccagatcg acaccgagaa
      661 cgatatcggg tcgcccggag aattccccta cacgcgtgga attcacgcca gcggatatcg
      721 gggcaagctt tggaccatgc ggcagttcgc cggtttcggc acacctgaag agaccaacct
      781 caggttcaag tatctttcaa gggaaggcca aaccgggctc tcggtcgcgt atgacctacc
      841 aacattgatg ggttatgacg cggactctcc tctgtcagaa ggagaggtcg gcaaatgcgg
      901 cgtcgcagtt tcttcgctcg ccgacatgga ggcgctattc gacggcatcg accttgagca
      961 agtgactgtc tcgcaaacta tcaatgcgcc cgcgtcggtt ctgctcgcga tgtatctggt
     1021 agtcgccgaa aagcaaggcg ccgattggaa gaagatatcg gggactcttc agaacgacat
     1081 tctcaaggaa tacatcgcgc agaaggagtg gatttacccg attcggccgg cgatgaagct
     1141 cgtcatcgac acgttcgagt tctgcaccga acaggttccg cgctacaacc cgatttctgt
     1201 cagcggctac cacattcgtg aagccggagc gaccgcgctg caggaactcg cgtttacgct
     1261 gcgcgatgga atcgaatatg tcgactgggg catccgcgcc gggctggata tcgatcgctt
     1321 cgtgccgcga atttcattct ttttcaacgc gcataacgat ttctttgaag aaattgcgaa
     1381 gtaccgtgcg gcgagaagaa tctgggcgag ggtgatgcgg gatcggttcg gttcaaccag
     1441 tgaacgcacg ttgaaactca ggttccacac gcagaccgcg ggcgtctctc taaccgtgca
     1501 gcaaccgctc aacaacgtcg tgcgcgtcgc aatccaggcg ctcgccggcg tgctaggcgg
     1561 cactcaatcg ctgcacactg attcttacga cgaagcgctg gctcttccga ctgatcgcgc
     1621 cgcactactc tctctgcgca ctcaacaaat cattgcggaa gaaagtggag tggcgaatac
     1681 ggtcgacccg ctgggcggtt cgtattttgt cgaatcgcta acgcagaaga tggaagacgg
     1741 cgcgcgcgac tatttcgagc gaatcgatgc catgggcgga atggtggaag ccatcgaaaa
     1801 aggttttccg caaagagaga ttcaggactc agcctatcaa tatcagaagg ccctggaagc
     1861 gggtgagcag acaatcgtcg gcgtgaacaa gtttcaaatg gagcagacgg gcaccgaggt
     1921 tccgactctc gtcatcgacg aatcagtgcg gcaccatcag ctcgagcggc tcgaacagac
     1981 gcgcgctcgt cgagacaagc aagcggtcgt aagaacgttg gacaagttgc ggcacgcggc
     2041 tgaagccggt gacaacacga tgctcgcgac catcgaagcg gtgcgggagt acgctacgct
     2101 cggcgaaatt tgttcggcgc tgcgcgatgt ctacggcatc tacgaagaac ctgcgatcta
     2161 aggcgactcc cttttcatcc aaaatggctc aagaaagaaa gattcgcgtg ctcgtcgcaa
     2221 agccaggtct cgatggtcac gaccgtggtg caaaagttat cgcgcgcgca ctgcgtgatg
     2281 ctggcatgga agtcatttac acgggcctcc gtcagacacc cgaaatgatt gccgcggcgg
     2341 ccctacagga agatgtggat gcggtcggag tctcgattct tagcggcgct cacaacacgc
     2401 tttgtccgcg catcgtctca ctgctccgcg aacaggggat gaacgacacc ctcgttgttc
     2461 tgggaggcat cgtcccgcaa gaagatattc cgaagctgaa ggaacaggga gtggcggaga
     2521 tttttttgcc gggaacttca acccaggaca tcgcgaagtt catccgcgag aatgttcggc
     2581 cacgcgattg agagttactt gtccaggaaa cgcgcaattc ctgcacgaca atccttcgtc
     2641 atccgcgcgg tagcattgat gtccacgccc gccgccaacg catccggaaa cgacaaacca
     2701 tcagttgagt agaacagctt tttcgctaag ctgagcgcgg agcggctcat ctttacaaag
     2761 cgctgcgcga acgcttccag ctctgaatcg aatacgtcgc gatcgaaaac atgattaacc
     2821 aggccgaatt gcgcagcctc gtcggctgag atctcaacgc cggtcgtaat caactcgaag
     2881 gctttcttct ccgacgcact gcgccgcaga atcgccatca ccattgccgg cacaaaacca
     2941 atctttactt caggaaagcc aaagcgcgcg tcgcgttcag cgacaacgag gtcgcaagcc
     3001 agcgcgagcc cactgcctcc cgccaacgca cgcccgcgca cggcagcgat gactggcacg
     3061 tcaagttcgc gaatcaagag aagcaactct gcgagcgact gagcatcttc caggttttcg
     3121 gcgactgagg cctgggcgat tctctgaagc gctgacaggt ccgctcctgc acagaaatca
     3181 gaaccagcgc cacgtagcac gatgcaccga gcggactcat cggcattcgc acgtcgcaaa
     3241 gccgctttca gtccagtaac gatttcctca ttcagcgcgt tgcgctttcc gggacggttc
     3301 atcgtcacgt gcgccacgcc ctcgcgggtc tcaaacaaaa ctgtttcagc ttctgccatc
     3361 ttaaaaatta agagaggccc aggcgagatc cttcgtgatc cgcgacttca atttccatgc
     3421 gcagaagcgc agtagaaaag gtctttccct gcgcgtcggt catcagcgat agcgtcccac
     3481 cgccgccgag gctctcatgc aggagaaaat tgagcgcgcc gaggtttggc aactcgaagc
     3541 gttccacctc gcctttacag at
//
LOCUS       DATDBY010000098         6630 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_514478, whole genome shotgun sequence.
ACCESSION   DATDBY010000098 DATDBY010000000
VERSION     DATDBY010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6630
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_514478"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..217
                     /locus_tag="VIT19_01900"
     CDS             <1..217
                     /locus_tag="VIT19_01900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837757.1"
                     /translation="CIANPDLVATKYPLGSAAFFFNSNNIWPVCDQGSSDGVVSKVST
                     RVNGKDPAHGLADRKANFKKFWQALNS"
     gene            469..3606
                     /locus_tag="VIT19_01905"
     CDS             469..3606
                     /locus_tag="VIT19_01905"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY5837758.1"
                     /translation="MSKQSDSPLRIYNVLEEEYELLHGAPSPSLDSTKPAEERLKNVI
                     AENHKQNHAAICLSGGGIRSATFGLGVLQGLAHNNLLDKFSYVSTVSGGGYIGSWLSA
                     WIHREETGIKGVANQLPGEHPPYVMKPEAEPITHLRSYSNYLTPKLGMLSADTWTLVA
                     MVIRNLILNWLVLIPLLIAVLALPRLFASLSEWTPPGYVRIAALLVGFILGVQMIVYV
                     AISRPSITKKNRDQKNFFRWCLVPMLVSATLLALYWSWFTQPNHQALNIDVERSLTFH
                     LLDGRSRIFGFMAFGVVLHLAAFVVYAPLIIRSVKRRLLGREFVVLVINGIVGGAMLF
                     LVARLLPELNTSRIDDQSFYSTLAVPIYLLVVFLGLSLFVGLVSKWTEDEDREWWARY
                     GAWILIASVVWMVGSFLVLIGPDLTSFVVRKYVVPAGGLLGVITALLARSAKLPAKGE
                     KPKGWMALLMQHALTLGAIVFAAVLVVALSLATSFLLGWLAPFWNWIGGRLAQWTGSP
                     FATSGLAPTRDILLFMGAAAGIGLVMAHYVNTNKFSHHAMYRNRLIRAYLGASRRSAE
                     RQPNKFTGFDSDDNVNMAELRPETLHTKSFTEPNGFRSLVNRLRDKSDPASAYIESKA
                     LEFTTKQLLNRYDPNLAGDHSGKALETALIRDLNKHLLQNPIVPPDIQKTLAIDLQSV
                     SAPSVEFVKRNRLALEAVFKEEIRPANLSSRRPLHIVNTTLNLVAGDRLAWQQRKAES
                     FTVSPLHCGSFQIPDSDERTGPVYGSYRRTVKYGGETYGGISLGTAMAISGAAASPNM
                     GYYSSPVVGFLMTLFNVRMGWWLGNPGPAGEDYYKFSSPKSAVYPIIAEALGWTDDQN
                     NYVYLTDGGHFENLGLYEMVLRRCRLIVVSDAAGDPDFQYNDLGNAVQKVRTDLGIPI
                     EFGPMKIFPRRDKKPGAYTAIGTIRYSAIDKGEKNAQGEEGMVHDGKIIYIKPAFYGD
                     EPRDIYRYAMTHETFPQQSTGDQWFDESQFESYRKLGSHIVDSICDVGARGNPFGSGD
                     IGLDKFFDQATNRSM"
     gene            3769..4473
                     /locus_tag="VIT19_01910"
     CDS             3769..4473
                     /locus_tag="VIT19_01910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837759.1"
                     /translation="MDNLFSEWGIRAVGILGVLFIIYSLFLGKMSAQGLPDGYRGPVL
                     ALELVKSGADITQIVGAESGRVAGFLKEHTYKDFGFIVVYLLFFVAVGLLVSQMYAVP
                     ARYIAWFAAGCIVLGGILDVVENMGMLRAIGGEATDTVANSIRYASLSKWALLFLFSL
                     LVGLLMIPRGLFAPAGGLLLLAAVLGFSGVFLNLFRPKFYWTFEVSVLTMAAVTIFLT
                     IVFIFWPARVLSKFVR"
     gene            complement(4513..5229)
                     /locus_tag="VIT19_01915"
     CDS             complement(4513..5229)
                     /locus_tag="VIT19_01915"
                     /inference="COORDINATES: protein motif:HMM:NF016269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding SYLF domain-containing protein"
                     /protein_id="HEY5837760.1"
                     /translation="MKTANKTALLIIISSFFFSAFAQTSRERSTKKALAAARQSERAA
                     RVFNSIMATREKSIPRDLLQRAEAVAVFPGVLKGGFIVGGRRGSGVISRRVAGGWSAP
                     AFFDLTGGSIGLQIGASSTDYVLLFMNEEAVGSLLGNKLEIGGEGSAAAGPVGRSASA
                     STDLRLNAQILSYSRSKGAFAGLELKGVVIQPDNEDNAQVYGMTARDILTGANRIPMA
                     KMPLGVRVFPETLASYSVRR"
     gene            complement(5403..6128)
                     /locus_tag="VIT19_01920"
     CDS             complement(5403..6128)
                     /locus_tag="VIT19_01920"
                     /inference="COORDINATES: protein motif:HMM:NF016269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding SYLF domain-containing protein"
                     /protein_id="HEY5837761.1"
                     /translation="MFYSIKVFRLTVVVILAVLCVDLIASAQTRSRNASKLAKAATEA
                     QAAANTFTQIMNVPDKAIPQNLLDKAEAVAVFEVLKAGFIVGGRTGHGVISRRVPGGW
                     SPPAFHNLNGGSFGLQIGAAKTYVVLLFMNTGAVDSLMQDKFEIGGEGSIAAGPIGRS
                     ASASTDAQLKAQILSYSRSKGLFAGLEIKGVVISPDNNDNEPVYGMKADGVLSPTRQW
                     KLTGMPASVRIFPRTLARYSARK"
     gene            6292..>6630
                     /locus_tag="VIT19_01925"
     CDS             6292..>6630
                     /locus_tag="VIT19_01925"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837762.1"
                     /translation="MPIGTPFHERTFALCESLNYREWSGYYAVSAYETHHDHEYNAIR
                     NAAALIDISPLYKYRVTGKDATRLVDRIITRDMRKVSVGQVIYTPWCDEHGKVIDDGT
                     VARLEENVYRW"
BASE COUNT         1446 a         1808 c         1811 g         1565 t
ORIGIN      
        1 ctgtatcgct aatcctgacc tcgtcgccac gaagtatccg ctgggttcgg cggcattctt
       61 cttcaactca aataatattt ggcccgtctg cgaccagggc tcctccgacg gggtcgtgag
      121 taaagtctct acgcgggtga atggaaagga tccggcgcac ggtctcgccg accgaaaagc
      181 aaactttaaa aaattctggc aggcgctgaa cagctgaccg aacgcagcgc cgcaaggcaa
      241 tagccatcgg aatcttgttt gcgcccgtga gaatgtcgcg cgcaaagaag gattcaacgc
      301 cgaaaagcgt tgctatggaa gaggcttcac gcgggcgaaa cgcagatcct caaggaatcc
      361 gtgcctgcaa ggtcgcgctc tattcaagtg aaaggaatag gatggcgatt cggagcttgc
      421 ttgtccgcaa gcacgcgaaa aacacaacac atcagcggag gtcctcaaat gtccaagcag
      481 tctgacagcc ccttgcgcat ctacaatgtg ctcgaagaag aatatgaact attgcatggc
      541 gctccctcgc cttctcttga ttccaccaaa ccggccgaag agcgcctgaa gaacgtcatc
      601 gccgaaaacc ataagcaaaa tcatgctgcg atctgtttgt ccggcggcgg tattcgcagt
      661 gcgacatttg gtttaggagt gctccaaggc ctggcccaca acaacctgct ggacaagttc
      721 tcgtatgtgt caacagtttc gggcggagga tacatcggca gttggttgtc agcctggata
      781 catcgcgagg agacaggcat caagggtgta gcgaaccagt taccgggcga gcacccaccg
      841 tacgtgatga agcctgaggc ggagccaatc acgcatttgc gctcttacag caactatttg
      901 acgcctaaac tgggcatgtt gtcggcggac acctggacgt tggtcgccat ggtgatcagg
      961 aatctgattc tcaactggct tgtgctcatc ccgctgttga tcgcggtgct ggccctgcca
     1021 aggttattcg cttcgctctc tgaatggacg cctcccggtt acgtaagaat cgccgccttg
     1081 cttgtgggat tcattttggg agtgcaaatg atcgtttacg ttgcaatcag ccggccaagc
     1141 attactaaga aaaatcgcga ccagaagaat ttcttcaggt ggtgtttagt gccgatgctc
     1201 gtatcagcaa ccctgctcgc cttgtattgg tcgtggttca ctcaacccaa ccatcaagcg
     1261 ctcaacattg atgtagaaag aagtctgacg ttccatctcc tggacggacg ttctcgcatt
     1321 tttggtttca tggctttcgg ggtggtgctg catctagcgg cttttgtcgt gtacgcgcct
     1381 ctgataatca ggtcggtaaa acgaagactc cttggccgtg aattcgtcgt cctggtgatt
     1441 aatgggattg tcggcggcgc gatgctgttt ctggttgccc ggctccttcc tgaattgaac
     1501 acatcgcgaa tcgacgacca atctttctac tcgacgctcg ccgtaccaat ttatttgtta
     1561 gtggtatttc tcggattgag tctgttcgta ggtctcgtga gcaagtggac tgaagatgaa
     1621 gatcgcgagt ggtgggccag gtacggagcg tggatcctga tcgccagcgt tgtttggatg
     1681 gtcggcagtt ttctcgtgct aattggtccc gacctgacca gtttcgtcgt gaggaaatat
     1741 gtcgtccccg cgggcggctt gctcggtgtc atcacggcgc tcctggcgcg aagcgcaaaa
     1801 ctcccggcga aaggcgagaa gccaaagggt tggatggcac tgctgatgca acacgcgctg
     1861 actctgggag ccatagtttt cgccgcagta ctcgtagtcg ctttatctct agcaacgagt
     1921 ttcttgctcg gttggctggc acccttttgg aattggattg ggggcaggtt ggcgcaatgg
     1981 acaggctcgc cattcgctac atccggactc gctccgacgc gagacatttt gcttttcatg
     2041 ggcgcggccg ccggcatcgg tttggtgatg gctcattatg tcaacacgaa taagttttca
     2101 catcatgcga tgtatcgcaa tcgattgatt cgcgcctacc tcggtgcttc gcgccggagt
     2161 gctgagcgac aaccgaacaa atttacgggg tttgattccg atgacaatgt aaatatggct
     2221 gagttgcgac ccgagacgct tcacacaaaa agctttacgg agccgaacgg ctttcgtagt
     2281 ttggtgaaca ggttgaggga caaatccgat ccggcttcgg cttacatcga gtctaaagcc
     2341 ctggaattca cgactaagca actgctgaat cgttatgatc ccaatctcgc gggggaccac
     2401 tccggcaaag cgctggagac cgcattaatt agagacctca ataagcattt actgcaaaat
     2461 ccgatagttc cgcccgacat tcaaaaaacc cttgccattg acctgcaatc ggtttccgcg
     2521 cccagcgtcg aattcgtgaa acggaacagg ctggccctgg aggcggtatt caaggaagaa
     2581 atccgccccg cgaacttgtc cagccgccgc ccgcttcaca tcgtaaacac gacccttaac
     2641 ctggtggccg gcgaccgact tgcctggcag caacgaaaag ccgagtcgtt caccgtgagc
     2701 ccactgcatt gcggaagttt ccaaattcct gattcggacg agcgcacagg acctgtctac
     2761 ggatcatacc ggcgcaccgt caagtacggc ggcgagacgt atggtggcat tagcctgggt
     2821 accgctatgg cgatctcggg cgccgccgcc agtccgaaca tgggttacta ctcttcgccg
     2881 gtggtagggt ttctgatgac gctgttcaat gtgaggatgg gttggtggct gggaaacccg
     2941 ggacccgccg gggaggatta ctataagttc tcaagtccaa agtcggccgt ctatccgatc
     3001 atcgccgaag ctctgggctg gaccgatgac cagaacaact atgtgtatct gaccgacggc
     3061 ggtcacttcg agaatcttgg cctttacgaa atggttctgc gtcgttgccg tctgatcgtc
     3121 gtgagcgacg ccgccggcga ccctgatttt cagtacaacg atttaggaaa cgcggtccaa
     3181 aaggtgcgca cggatttagg cattccgatc gaatttggcc cgatgaaaat ctttccccgc
     3241 cgcgacaaaa aaccaggagc ctacacagcc attggcacca tccgctattc cgctatcgac
     3301 aagggagaga agaatgcgca gggcgaggag ggtatggttc acgacggtaa aatcatctac
     3361 attaagccgg cgttttatgg cgacgagcca cgcgacattt atcgctatgc catgacgcat
     3421 gaaacttttc cgcaacaaag cactggcgac caatggtttg acgaatcaca attcgaaagc
     3481 taccgaaagc tgggttcgca tatcgttgat tctatctgcg atgtcggagc gaggggcaat
     3541 ccgttcgggt caggcgatat cggactagat aaatttttcg accaggccac aaaccgatca
     3601 atgtagaaat ctctgcgtga cgcggtttac cgaatactct cgcgaaacca cgacggctgc
     3661 tctttctgtt ggcacgcgtg tctaagcgct cttgtgccaa cttgacccgt taatccgcag
     3721 tgaccgcagg cgcttcgctg ctcacttaag ccatcggagg ttcgcaccat ggataatctc
     3781 ttcagcgaat ggggcataag ggccgtcgga attctcgggg ttctcttcat catttactcc
     3841 ctcttcttgg gtaaaatgtc ggcgcaagga ttgcccgatg gttatcgcgg cccagtcctt
     3901 gcgcttgagt tagtgaagag tggcgccgac attacgcaga tcgtgggagc cgagtccggc
     3961 agggtcgccg ggtttttgaa agagcacact tacaaagact ttggttttat cgttgtctac
     4021 ctcctcttct ttgttgcagt cggtcttttg gtttcgcaaa tgtatgcggt cccggcccga
     4081 tacatcgcct ggttcgctgc tggttgtatc gtgctcggtg ggatcctgga tgtcgtggag
     4141 aacatgggta tgctcagagc aattggcggc gaagccacgg ataccgtcgc caatagcatc
     4201 cgctatgcgt cgctcagcaa gtgggcgctg ctcttcctat tcagtttact cgtgggctta
     4261 ttgatgattc cccgcggcct tttcgcaccc gcaggaggcc ttctcctgct agctgccgtt
     4321 cttgggttca gcggagtttt cttaaatctg tttcggccaa aattctattg gacgttcgag
     4381 gtgtctgttc tcacaatggc ggcagtgacg atctttctga ccatcgtttt catcttctgg
     4441 ccggctagag ttctgagcaa attcgttcgg tagctgtgga cccttttttt ttgtagcgac
     4501 cagcgacttc cctcacctgc gtactgaata gctcgccaaa gtctccggaa acacgcgcac
     4561 gcccaacggc attttcgcca tcggaatcct gtttgcgccc gtgagaatgt cgcgcgcggt
     4621 catgccgtaa acctgcgcgt tgtcttcgtt atccggctgg atcaccacgc cttttagttc
     4681 aagccccgca aacgcgcctt tactgcgcga gtaagaaaga atctgcgcgt tcaatctcag
     4741 atccgtcgaa gcactcgctg atcgtccaac cgggccggcg gccgcgctgc cctcaccgcc
     4801 aatctctaac ttattgccga gcaaacttcc gaccgcttct tcattcatga acaagaggac
     4861 gtagtcagtt gacgaggcgc caatctgcaa accaatgctg ccgccggtga gatcgaaaaa
     4921 cgccggcgcg ctccatccgc ccgcgacgcg gcggctaatg actccggagc ctcgtcgccc
     4981 gcctacgata aagccgccct tcaagacacc gggaaacacg gcgacggctt cggcgcgttg
     5041 cagcaggtcg cgcggaatag atttctcgcg cgtcgccatg atggaattga aaacgcgagc
     5101 ggcgcgttcg gactgcctgg ctgcggcgag ggctttcttt gtgctgcgct cgcggctggt
     5161 ctgcgcgaat gcgctgaaga aaaaactcga gatgatgatc agaagtgcag ttttgtttgc
     5221 agttttcatc cggtagtctc agctaaaata tcttcgtcgc aaggtgtgtc agaagctcgc
     5281 gcgtgaggcg ggccccggcg cgagcagttc gcgtgggtgc caagcaagtg caacttatga
     5341 gatctcaaat ttgagatttg agatctcaac agccctcgct cacggtcagg cttctgacac
     5401 gttcatttcc tggcagagta ccttgccaac gtgcgcggaa agatccggac gctcgcaggc
     5461 atccccgtca gtttccattg acgcgtcggc gaaagcactc cgtcagcttt cattccataa
     5521 accggttcgt tgtcgttgtt atcgggcgaa atcaccacgc ctttgatttc cagtccggcg
     5581 aacagtccct tgctgcgcga ataagagagt atctgagctt tcaattgcgc atcggttgaa
     5641 gcagacgccg atcgaccgat cggaccggcg gcgatgctgc cttcgccgcc aatctcaaat
     5701 ttgtcctgca tcaggctgtc aactgcgccg gtattcatga acagcaggac cacatacgtc
     5761 ttggcggctc cgatctgcaa accaaagctg ccgccgttca ggttatgaaa tgccggcggg
     5821 ctccatccgc ccggcactcg ccggctgatg acaccgtgac cggtgcggcc gccgacaatg
     5881 aagccggctt tcagcacttc aaacacggcg acagcttccg ctttgtccaa caggttctgc
     5941 ggaatcgcct tgtcgggcac attcatgatt tgggtgaaag tgttagcagc ggcctgggcc
     6001 tctgttgccg ctttcgcgag tttgctcgcg ttcctggatc gcgtttgcgc ggacgcaatt
     6061 aagtcaacgc agagaaccgc gaggatgaca accaccgtga gacgaaaaac cttaattgag
     6121 taaaacataa ctcccctttc tgtaaccacg ccgaaacagg gggactcatg atgacgtttg
     6181 ctcacttgtt cggagcatac ttataatcgc tcgctctgac aacgagtggc acagacttta
     6241 gtctgtgatt actcttgcga acacacagac tgaagtctgt gccaccaata tatgccgatc
     6301 ggtactccat ttcatgaacg gacgtttgcg ctatgcgaga gtctcaacta tcgcgagtgg
     6361 tcgggctatt acgcggtcag cgcgtacgag acgcatcacg atcatgagta caacgcgatt
     6421 agaaatgccg cggcgctgat cgacatctcg ccgctgtata aatatcgagt caccggaaaa
     6481 gatgctacac gtctggttga tcgaatcatc acgcgcgaca tgcgcaaggt ttccgtcggg
     6541 caggtcattt acacgccctg gtgcgacgag cacggcaagg tgatcgacga cggcacagtt
     6601 gcccggctcg aagagaacgt ctatcggtgg
//
LOCUS       DATDBY010000099         4551 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_818044, whole genome shotgun sequence.
ACCESSION   DATDBY010000099 DATDBY010000000
VERSION     DATDBY010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4551
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_818044"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..1152
                     /locus_tag="VIT19_01930"
     CDS             178..1152
                     /locus_tag="VIT19_01930"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5837763.1"
                     /translation="MGRPRASIIITTHSRPRLLLRAIESARASGTDVEIIVVDDASSD
                     QTATLCRALAAEITYVRVDRNQGVAGARNIGILTSRGEYLSFLDDDDTRLPGSLDKQI
                     AKLEAVPEAAFVYGQAIVGDQDGRPGRRLNPTECPEGDIFLKLLTRNFIPCGTAVIRR
                     SCLSRAGLLDNSIAGPDDWDLWIRLSELFPVIAVAEPVIIWRQSNPASGQGTSQTARL
                     VSMGVRQFQKWLTLPRMSAVTTSVKRALWRSFSERMAERLLWDSLRALARARLIQVGK
                     NLATIGILHPLVIPRVIKNRLFSEQRAELLSMIRSAMSGGTPDSPSRG"
     gene            1331..1972
                     /locus_tag="VIT19_01935"
     CDS             1331..1972
                     /locus_tag="VIT19_01935"
                     /inference="COORDINATES: protein motif:HMM:TIGR02595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HEY5837764.1"
                     /translation="MTTTFHRIFRGTTLAVALLVILGATHSAARADEVTISGSTAGAT
                     SVPFLGFTGNQFTGTTALGIGSLSGANSLGQLSLATAPLELIGGIFQLNITFTAPTGI
                     AGGQGTDYVATVLGSVSPNVDQGGINIHFQNPTQTFTFSDGLNTGSFSLTVADLFVQT
                     GRTANLTAGFTGQQAPAVPEPATLLLLGTGIAGVAAKLRSRRKAKLADETATV"
     gene            complement(2037..2771)
                     /locus_tag="VIT19_01940"
     CDS             complement(2037..2771)
                     /locus_tag="VIT19_01940"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HEY5837765.1"
                     /translation="MKAETLNCPNCGAAISSDSPRCQFCESKLATVACPSCFAMMFIG
                     SRHCPHCGAPAAETRATSLSTLKCPKCKSDMQPITLGGSAMRECERCGGLWLEVAAFE
                     KICADREHQSAVLGLASPVTGHPMDPTSDKIKVRYFPCPQCAHLMNRMNFARCSGVIV
                     DVCRGHGIWFDRDELRGIIEFIRGGGLQLSREKEKREIAFEREQLQREQFVASRSEAR
                     AFSYSDEDQLNGFSAARGLLKFIIEH"
     gene            3136..>4551
                     /locus_tag="VIT19_01945"
     CDS             3136..>4551
                     /locus_tag="VIT19_01945"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEY5837766.1"
                     /translation="MNRTTQRMTAKVSAWLLAVAIVATPIAALAQTQIKLHSNKYSVA
                     DDVKVGRQAAAEVEQKFPLLRDAEVQRYVETIGQDLVAAIPPEFQHAEFRYFFKVVNA
                     RDINAFALPGGPMYVNRGMIQAARTEGQMAGVMAHEISHVALRHGTAQATKAQKYALG
                     AGIAGILGSILGGPAIGQIAQGTIGVYFLKFSREYETEADILGARILANAGYDPRELA
                     AMFQTIERAGGGSSGGFFSSHPSPANRYARINQEAQYLQIRNARRDNRDFLAINQRLR
                     NFGAAPTLAEIERSGQRYPNQGEGYPTGESTGYPNAPTGRVEYPSSRYRSYSIGVAQV
                     SVPENWRQVSDSSSSVWFAPNGAVGSMNGQPVFTHGVNIGVAQTNNRNLQQATNEFLS
                     SLRQGNPNLRSRGGLQRSSIDGRTALTISLSNVNEATGRPEVVNVITTQLRSGELLFL
                     IAVAPNDEYSNYQGVFQNVLRS"
BASE COUNT         1012 a         1267 c         1331 g          941 t
ORIGIN      
        1 aacctgttgg tcgcgctgcg cctggccccg tggcgtcctt tgcaactgcg gggataccag
       61 cgtttggcgg aacgattgag tgcgcgggcg acaacgatcg taaatcttga gaaggaagct
      121 taccgtttgt ctgaagggcc ctgatcgcgg cccgtcacgc gtcgtccggg aacaaagttg
      181 ggaagacctc gagccagtat catcatcacg acgcacagtc gccctcgctt gctcttacgt
      241 gcgatagaga gcgcgcgcgc atccggcact gatgtcgaga tcatcgtggt tgacgacgcg
      301 tcatccgacc agacggccac cttgtgtcga gcgctggccg ctgaaatcac ctacgtgcgc
      361 gtggatcgaa atcaaggcgt agcgggcgcc cgcaacatcg gcatcctgac aagccgcggc
      421 gaatacctca gtttcctcga tgacgacgac acgcgcttgc cgggctcact ggacaagcag
      481 atcgcgaaat tggaagcggt tccggaagcg gcgttcgtct atgggcaggc aattgtaggc
      541 gatcaggacg ggcgccctgg ccgtcgtcta aacccgacgg aatgcccgga aggagatatt
      601 ttccttaagc tcttgacgcg gaatttcatc ccgtgcggca ccgctgtcat ccgccgttcg
      661 tgtctgtcac gggcgggtct cctggacaat tcaatagcag gtcccgatga ctgggatctg
      721 tggatccgcc tctctgaact ctttcctgtc attgcggtcg ctgagccggt gatcatctgg
      781 cgccaatcta acccagcttc gggccagggc acgtcacaga cggcccgcct cgtctcgatg
      841 ggcgtgcggc aatttcaaaa gtggctgacg ctgccgcgta tgtctgctgt cacgacgagc
      901 gtaaagcgag cactctggcg ttcgttttcc gaaagaatgg ctgaacgtct actgtgggac
      961 tcgctgcggg cgctggcgcg tgctcgtctc attcaggttg gcaaaaacct cgccacaatt
     1021 gggattcttc acccgctggt aattccccga gtgattaaaa accggctatt cagtgagcag
     1081 cgagctgagc tgctcagcat gatccgatct gccatgtccg gcggcacccc ggattcgcct
     1141 tcccgcggtt gataaccacg ttttttgtcc acagactttt ggaatctggc ttagattgac
     1201 tctttccttg ctctgaaaac ccagaagtgt cgcacagaca gctttcgcgg tcggagagaa
     1261 gcgtttgccc cgcatctctc cctctgtagc cagtctgaaa acgtagttca cagtctttta
     1321 gggggcagtt atgacaacaa cttttcaccg aatttttcga ggcaccacgc tggcagttgc
     1381 gctgctggta atcttgggag ccactcactc tgcggcgcga gccgatgaag ttaccattag
     1441 cggatcgacg gccggcgcaa cctcggtccc gtttctgggg tttacgggaa atcaatttac
     1501 cggcacgacg gcgctcggga ttggatcttt gagcggggca aacagcttag ggcaactctc
     1561 gctggcgacc gccccactag agttgatcgg cggcatcttt caattgaaca tcacgtttac
     1621 ggcgccgacg ggaatcgcag gtgggcaagg taccgactat gtagcgaccg tcctgggcag
     1681 cgtttcaccg aacgtcgatc agggtggcat caatattcac tttcagaatc cgacgcagac
     1741 cttcacattc agcgacggct taaacactgg cagcttttcg ctgactgtcg ccgacctgtt
     1801 cgtacagaca ggacgtactg cgaacttgac ggccggattc accggacaac aggcaccggc
     1861 ggttccagag ccggcaacgt tgctgttgct gggaacggga atcgctggag tggcggccaa
     1921 actccgcagc cgcagaaaag cgaaactcgc cgatgaaacg gcaacggtat gactttgcga
     1981 tagtttggaa ttgaggagag ccggcagttt atctgccggc ttttttgttt gatgtcttaa
     2041 tgctcgatga tgaacttcag caagcctcgc gccgcagaga atccatttag ctgatcctcg
     2101 tccgaataag aaaacgcgcg cgcctcagag cgactggcca caaactgctc tcgctgaagt
     2161 tgctcacgct caaaagcgat ctcacgtttc tccttttcac gtgaaagctg caggcctcca
     2221 ccgcggatga actcaatgat gccgcgtagc tcgtcccgat cgaaccaaat gccgtggccg
     2281 cggcaaacat caacgatcac gcctgagcat cgcgcgaagt tcatccggtt catcaaatgt
     2341 gcgcattgag ggcagggaaa ataacggact ttgatcttgt ccgaagttgg atccatggga
     2401 tgccccgtaa ccggcgatgc caggccaagc acggccgatt ggtgctcgcg atcggcgcag
     2461 atcttttcga aagccgcgac ctcgagccac aagccgccac agcgttcgca ctcgcgcatc
     2521 gctgagccgc cgagcgtaat cggctgcatg tcgctcttgc atttcggaca cttcaaagta
     2581 gagagcgacg tggctctcgt ttcggcggcc ggcgccccgc aatgcggaca atgacggctg
     2641 ccgatgaaca tcatggcgaa gcacgagggg caagcgacgg tcgcgagctt tgattcgcaa
     2701 aattgacaac gcggcgagtc agaggaaatg gcggcgccac agtttggaca attgagagtt
     2761 tcagctttca tcgaattggc ggcctgttcg cggccggccg tgccagctta acatcgctaa
     2821 gacgtcttta cggacaaaaa tcctggccca cgaactgcgt ttgaaatgaa ccaaatcggc
     2881 gctgagatga acgaaattga agcatagtca gccgggttcg aaactgttag tctgaggccg
     2941 attaggcaac cctcgcgaat agcggcggaa cctgtaaatg aaagatgaaa cgcaagatat
     3001 tcgtaagaat cacaatcaag ctcggtgacc gcgatttcga gtggcatcat aattgattac
     3061 gaaagcatgg gaaaaacgtc cgcctaaatc tttgtccagt tcgagacgtg gatctcaaat
     3121 cgagaggagt ttgaaatgaa tcgaacaacg caacgcatga cggccaaagt ttcagcctgg
     3181 ttgctggctg tagcgatagt ggcaacgccg atcgcggctc tggcgcaaac ccagataaag
     3241 ttacatagca acaagtacag tgttgccgac gacgtgaaag tgggccggca ggccgccgcg
     3301 gaagtcgagc aaaagtttcc actgttgcgc gacgcggaag tgcaacgcta cgtcgaaacg
     3361 attggccagg atctggttgc cgcaattcca cctgaatttc agcacgccga atttcgttac
     3421 ttcttcaagg ttgtaaacgc gcgtgacatc aacgcgtttg cgttgcccgg tgggccgatg
     3481 tatgtcaacc gcggaatgat ccaggcggcc cgtactgaag gccaaatggc cggcgtgatg
     3541 gcccacgaaa tcagtcacgt ggcgctgcgt catggaacgg cgcaggcgac caaggcccag
     3601 aagtacgcgc taggtgcagg catcgccgga attttgggca gcatcctcgg tggcccggcg
     3661 atcggacaga tcgcgcaggg tacgattgga gtttacttcc tgaagttcag tcgcgaatac
     3721 gaaactgaag cggacatcct cggcgcgcgc atcctggcga acgcgggtta cgatccgcgt
     3781 gaactcgcgg ccatgttcca aacgatcgaa cgtgcgggtg gcggcagcag cggtggtttc
     3841 tttagcagcc acccgagtcc ggcgaaccgc tacgcgcgca tcaatcagga agcgcagtac
     3901 ctgcaaataa ggaacgcgcg gcgcgacaac cgcgattttc tggcgattaa tcagcgactg
     3961 cggaactttg gagctgcgcc gacactggct gagatcgagc ggagtggtca acgctatccg
     4021 aaccagggcg agggttaccc gaccggcgag agcacgggtt atcccaacgc gccgacgggg
     4081 cgggttgaat atccatcgtc gcgttatcgc agctactcga tcggcgttgc gcaagtgagc
     4141 gtgcctgaga actggcggca ggtctctgac agtagctcgt cagtttggtt cgcgccgaac
     4201 ggcgcagtcg gcagcatgaa cggccagcca gtctttactc acggcgttaa catcggcgtg
     4261 gcgcaaacca acaaccggaa cttgcagcag gcgacgaacg aatttctcag cagcctgcgg
     4321 caggggaatc cgaacctgcg ttcgcgcggc ggtctacagc gcagttcgat tgatggtcga
     4381 acggctctga cgatcagctt aagcaatgtt aacgaggcga ctggccgtcc ggaggtcgtg
     4441 aatgtgatta caactcagct gcgcagtggt gagttgctat tcttaatcgc agtcgcgccc
     4501 aacgacgaat actcgaatta ccagggcgtc tttcagaatg ttctgcggtc g
//
LOCUS       DATDBY010000100         3681 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1634646, whole genome shotgun sequence.
ACCESSION   DATDBY010000100 DATDBY010000000
VERSION     DATDBY010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3681
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1634646"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..335
                     /locus_tag="VIT19_01950"
     CDS             <1..335
                     /locus_tag="VIT19_01950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837767.1"
                     /translation="ADQRQQLGAFYVPPAERPRVILRFASDEKNLLISGMLAGGSELA
                     NAPAVIDVPVGKGHIVMFATNPMWRHQNHGSFFLIWNAALNFDSLNTERPAPAAPRRP
                     GGAESDDQ"
     gene            complement(399..1496)
                     /locus_tag="VIT19_01955"
     CDS             complement(399..1496)
                     /locus_tag="VIT19_01955"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEY5837768.1"
                     /translation="MRLYRTNLHPDTHAGMPGIRFLLTLVVLVSVTAAPALLTGLTAG
                     AQQPNGATYEDEIQTGRNFMRQRKYEDALKAFKRANDLKGKTSAEAYLAMANAYMGLE
                     AFKNVAQSADKVVEFAANNPELQAQAYNLKAIAIQRQSDGGKDQKKLQEAETVFRQAV
                     TAKADYAESRYNLGVVLLQQNRDPEGIAELRKYLELAPDQFFSADARKIIENPRRARE
                     PFAPDFSITTSEGEYISLDDLKGKVVLLDFWGTWCPPCVASLPALRTLNKKFTKSEKF
                     VLLGISSDGDEDKWSNFIVKQEMVWPQFLDRQRAVQRAFRVSAFPTYIVLDHEGVIRF
                     RTSGSSFEREAELSHAIEKQIKILQKAAPSN"
     gene            1673..2068
                     /locus_tag="VIT19_01960"
     CDS             1673..2068
                     /locus_tag="VIT19_01960"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5837769.1"
                     /translation="MSDYKCRILYVDDHDDSAEMLKLVLADVDYEVESARTVKQALEV
                     ASQIEFDLYVVDKRLPDGSGLELVKQLEKLTPGIPSIVYTGDVYEVHREQAMAAGAHA
                     FVCKPDIETLIKTIHGFLSGRECATATAA"
     gene            2098..3126
                     /locus_tag="VIT19_01965"
     CDS             2098..3126
                     /locus_tag="VIT19_01965"
                     /inference="COORDINATES: protein motif:HMM:NF042562.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6687 family protein"
                     /protein_id="HEY5837770.1"
                     /translation="MKKMRFEFYSDAIAAAPKLSVDGTVDNAIHFSHWNGNKTPASVK
                     ADTSTEIVLNVVAAANRNQLTQGIDLVTNNHFDTDGTLSVWSMLNGERALQLRDKLIA
                     AAEAGDFCELSTVDAVRASIVIQGSDSPTDKSGSPLARQLAGEDITDEARAYELVLPH
                     VERVITDTNNFEELWRESWTRIEAALDSFAKGESRVEEDTNAGLSVVTLAPDVFGATG
                     FDPYHHSAPFTAISHHARGELFLIATPLGDGWAYRIDYPYYSWAETVVRPAVARRDFS
                     SLVRQFNDLDQSTTGRWQVDDSELASAIKFGDDSGKLAASKLAPDTVGTHLRVALSER
                     VAAEAQHG"
     gene            3119..>3681
                     /locus_tag="VIT19_01970"
     CDS             3119..>3681
                     /locus_tag="VIT19_01970"
                     /inference="COORDINATES: protein motif:HMM:NF015786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY5837771.1"
                     /translation="MANWDERYRSGEHAIKEPSPLLRTAIKSLEPGRALDIASGVGRH
                     AIFLAEHGWNVTAVDSSRVGIEILQQRAHEAGVTVEARVADLESGEFQIEPGTYDLVC
                     VFYYLQRDLFSPIRAGVKRGGIVVAAIHLNDGKEDAKPANPAFLLERGELKQLFADWE
                     ITYYREGESDEGGHHHDTAYLVARKPP"
BASE COUNT          771 a         1043 c         1061 g          806 t
ORIGIN      
        1 ccgcggacca gcgtcaacaa ctcggcgcgt tttacgtgcc gccggccgaa cggccgcgcg
       61 tgattctgcg ctttgcgtcc gacgaaaaga acctcttgat tagcgggatg ctggcgggcg
      121 gatcagagct ggcaaacgcg ccggccgtga tcgacgtgcc ggtcggcaaa ggccacatcg
      181 tcatgttcgc cacgaatccg atgtggcgtc atcagaatca cgggagcttc tttctgattt
      241 ggaatgcggc gcttaacttc gattcgctga acactgagcg accagcgcct gccgcgccgc
      301 ggcggcccgg tggcgccgag tcggacgatc aataacgagg tttcggtacg cacgcctcag
      361 gcgtgctcaa gcgcgccaga ggcgcgcgta cccaacactt aattagacgg cgcggccttc
      421 tgcaatatct ttatttgttt ttcgatggca tgggacagct cggcttctct ttcgaagctc
      481 gagccactgg tgcgaaagcg aatgacgcct tcgtggtcga gcacaatgta ggtcggaaac
      541 gcgctgaccc tgaaggcgcg ttgcacggca cgctgccggt cgaggaactg tggccaaacc
      601 atctcttgtt tgacgataaa gttactccac ttgtcttcgt caccatctga gctgatgccc
      661 agcaggacga acttttcact cttcgtaaac ttcttgttca gagtgcgtaa cgccggcagc
      721 gaagcaacgc acggcggaca ccatgtaccc cagaaatcca gcagcacaac tttgccttta
      781 agatcgtcga gtgaaatgta ttcgccttcc gacgtcgtga tcgaaaagtc gggcgcgaac
      841 ggctcgcgcg cacgccgcgg attctcgata atctttcgcg catcagcaga gaagaattga
      901 tcgggcgcca gttcaaggta cttcctcagc tcggctattc cttccggatc gcggttttgc
      961 tgaagcagca cgacacccag gttgtagcgt gactcggcgt aatccgcctt cgccgtcaca
     1021 gcctggcgga agactgtttc ggcttcctgc agtttcttct gatcttttcc tccgtctgat
     1081 tgtctctgaa tcgcaatggc tttcaggttg taagcctgcg cctgcaactc cgggttgttg
     1141 gcggcgaact caactacctt gtcggcactt tgcgcgacgt tcttaaaagc ttcgagtccc
     1201 atgtaggcat tcgccatcgc caggtaagct tcggcggacg tcttgccttt tagatcgttg
     1261 gctcgtttga atgccttgag cgcgtcttcg tacttccgct ggcgcatgaa attgcggccg
     1321 gtttgtatct cgtcttcata agtcgcgccg ttgggttgtt gagcgccggc agtgaggcca
     1381 gttaagagag ctggcgccgc cgtcaccgag acgagcacaa ccagcgtcag caaaaacctg
     1441 attccgggca ttccagcgtg agtgtcaggg tgaagattcg ttcggtacaa ccgcatggga
     1501 tactcctttt gcggcgcata atagcattat gggctcgggc ctatcgagtg ggacccggcc
     1561 ttcccaaaaa aggcttgcca gcgggggact tccttcgact ataattggcg cgctaaccgt
     1621 actactttca ttctgaaacc gagaggattt ggaccccgta aggaggtagt gtatgtctga
     1681 ctacaaatgc cgcatccttt acgttgatga tcatgatgat agtgctgaga tgctgaaact
     1741 tgtgctggcg gacgtggact atgaagttga atccgcacgc acggtcaagc aggcgctgga
     1801 agtggcttcg cagattgagt tcgacctcta cgtcgtggac aaacgtctgc ctgacggctc
     1861 cggcctggaa ttggtcaagc agctggaaaa actaacgccc ggtatcccca gcatcgttta
     1921 caccggcgat gtttacgaag tgcatcgtga acaggcaatg gcagccgggg cgcacgcctt
     1981 cgtctgcaaa cccgacattg aaacgctgat caaaactatt cacgggttcc tttccgggcg
     2041 tgagtgcgca acggcaaccg ccgcgtgaca acaggtgttt ccggcagcac ggcgcagatg
     2101 aagaaaatga gatttgagtt ctacagcgac gcgatcgccg ccgcgccgaa gctctctgtt
     2161 gacggtaccg tcgataacgc gattcacttt tcacactgga acggaaacaa gacacctgcg
     2221 tcagtgaagg ccgatacgtc gacggagatc gtgctgaatg tggtcgccgc cgcgaatcgc
     2281 aatcaactga cgcaggggat cgatctcgta acgaacaatc acttcgatac ggacggcacg
     2341 ttgtccgtct ggtcgatgct gaacggcgag cgcgcccttc agttgcgaga caaattgatt
     2401 gcggcggcag aggccggcga tttctgcgag ctgagtactg tagatgccgt gcgcgccagc
     2461 atcgttattc aaggatcgga ttcgccgact gataagtcgg ggtcgccttt ggcgcggcag
     2521 ctggcgggcg aagacatcac tgacgaagcg cgcgcttatg aattggtact gccacacgtc
     2581 gagcgtgtga tcaccgacac gaacaacttc gaagaattgt ggcgcgaatc atggacacga
     2641 atcgaagctg cgctcgacag ttttgcgaaa ggcgaatcac gcgttgaaga agacacgaac
     2701 gcaggattgt cggtggtgac gctcgcgccc gatgtttttg gcgccaccgg ttttgacccg
     2761 taccaccatt cagcgccttt cacagcgatt tcccaccacg cgcgcggcga gctcttcctg
     2821 attgcaacgc cgctcggcga tggctgggcc taccgcatcg actatccgta ctactcctgg
     2881 gccgaaaccg tcgtgcgacc ggcggtagcg cgccgggatt tcagttcgct cgttcgtcag
     2941 ttcaatgacc tcgaccaaag caccaccggt cgttggcaag tcgacgacag cgagctcgca
     3001 tcggcgatca agtttggcga cgacagcgga aaacttgccg cgtcgaaatt ggcgcctgac
     3061 accgttggga cccatcttcg tgtcgccctc tccgaacgcg ttgccgccga agcccagcat
     3121 ggctaattgg gacgagcgtt atcgcagcgg cgagcacgcc atcaaagaac cttcgccgct
     3181 tctccgcaca gccatcaaga gtctggagcc cggccgcgcg ctggacattg caagtggcgt
     3241 cggtcgtcac gcgatctttc ttgcggaaca cggctggaat gtgacggcag tcgattcttc
     3301 gcgcgtcggc attgagattc tgcaacaacg tgctcatgag gccggtgtaa ctgtcgaagc
     3361 ccgcgtcgcc gatctcgaat caggtgagtt tcagatcgaa ccgggcacct atgatctggt
     3421 ttgcgtcttc tattatcttc agcgcgatct gttttcgccg attcgcgcag gtgtgaagcg
     3481 gggcggcatc gtcgtcgccg caattcatct caatgacggg aaagaggacg ctaagcctgc
     3541 gaatcccgcg ttcctgcttg aacggggcga actaaaacaa ttgtttgcag attgggaaat
     3601 cacgtactat cgcgaaggcg aatcagacga aggcggccat catcacgaca cggcgtatct
     3661 ggttgcccgc aagcctccgg a
//
LOCUS       DATDBY010000101         3332 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2967464, whole genome shotgun sequence.
ACCESSION   DATDBY010000101 DATDBY010000000
VERSION     DATDBY010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3332
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2967464"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            177..1718
                     /locus_tag="VIT19_01975"
     CDS             177..1718
                     /locus_tag="VIT19_01975"
                     /inference="COORDINATES: protein motif:HMM:NF016196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 family protein"
                     /protein_id="HEY5837772.1"
                     /translation="MHGYGAAWLAIWMLFHPYKPVKLLRFTIWPQGMIPRHRERLAQS
                     IGNAVGNELVSQETVFQALFETGFFERKVESFVNSYTTELLSTAYPSLIEALPTGARA
                     PVLDTIAALQYRLAEHIASVLKSEQTAEAIENFVDRQVDSLLERRLSETVSEETFTQI
                     LGFAEGRFTDLVNDERFEANVSSFVSERLGDLAGTHATLAEMFTPETVALIKDRITQQ
                     VGPIADQLADIVTSPTTRNQIGGLIKHEVDDYYRDLSFLKKIFISRERIYQEVDDLVH
                     ATMPRRVDEYLRGPAFASEATVFINTTVDNFMTRPLSELVGQVSSERFETIRREAGAR
                     FVAMARSPELARSVSTYLTDAVGRLRPQTLRELLERLNPESAPRVKKFLTGSLLTVLA
                     RDDTARTINAILSSQIERFLVSPIGRLADHMPEGAIEKASVALTGKITAAARERLPAA
                     LAEFDVGGLVRKKVSDYPIDKLEELVLMVAKHHLKTIEMFGAIIGFWIGVAQAIYFWF
                     TYVPR"
     gene            1899..2198
                     /locus_tag="VIT19_01980"
     CDS             1899..2198
                     /locus_tag="VIT19_01980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HEY5837773.1"
                     /translation="MTYVVVEPCVDCKYTDCAAVCPVEAFHELTDRLYINADTCIDCD
                     ACVPECPVEAIFADTSLPENYSEWLQINIDEAPKYPVISQKIPALFGPNCKGQPE"
     gene            complement(2270..2863)
                     /locus_tag="VIT19_01985"
     CDS             complement(2270..2863)
                     /locus_tag="VIT19_01985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837774.1"
                     /translation="MINEKFGSRVTSVWNDLRPQTRNLLERAWQSTPPAPVEQSRAYD
                     PRADRELSKLLAALDERTQRKDAGAEDDSARQARRLADTCVQMLTQQTQSAEVFGQLI
                     QRAHERQQFARLDELANGMAVRLAPSELCDMARSQNVVVRALANEVLTQAPPSLLRAL
                     LHDPIDADVARSVLERQAHEFGLEEAKRTLREIDEFG"
     gene            2972..3163
                     /locus_tag="VIT19_01990"
     CDS             2972..3163
                     /locus_tag="VIT19_01990"
                     /inference="COORDINATES: protein motif:HMM:NF015899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEY5837775.1"
                     /translation="MAISEQLLEILVCPVCHAKVELRPDGSGLKCVSCRRVYPIRDDI
                     PVMLIDEATIEDEQPAGNN"
     gene            3138..>3332
                     /locus_tag="VIT19_01995"
     CDS             3138..>3332
                     /locus_tag="VIT19_01995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837776.1"
                     /translation="MNSLREIIEASPSVRHLAFADQETSEPQPLAVARWDWSEVKRVL
                     VIRLRSIGDAVLTTPALFALR"
BASE COUNT          720 a          911 c          945 g          756 t
ORIGIN      
        1 cacggattac acggattacg aatcgggccg tgaacgcttt gtgattgtga tagctgaaca
       61 tcgttgacgc ttgactcgtt ctcaccggtg taatctgtgg attcaaccag ggggcactca
      121 tcgatccaat cacctttaaa attctaatca gccttgccat cgtcgtaatc gcgacggtgc
      181 atggttatgg cgcggcgtgg ctcgcaatct ggatgctgtt tcacccctac aagccggtga
      241 aacttttacg attcacgatt tggccacagg gaatgattcc gcgtcatagg gagcgtctgg
      301 cgcaatcgat tggaaatgct gttggtaatg agctcgtttc gcaggaaaca gtcttccagg
      361 cgctgttcga aacgggattc tttgaacgca aggtcgaaag ctttgttaac tcgtatacga
      421 ccgaattgct ttccaccgcc tatccgtcgc tgattgaagc gctgcccacg ggcgcgcgcg
      481 cgccggtgct cgacacgatt gcggcgttgc agtaccggct cgcggaacac atcgcatcgg
      541 tgctgaagag cgaacaaacg gctgaagcga tcgaaaactt tgtcgatcgc caggtcgaca
      601 gtctgctgga acggcggctg agcgaaactg tcagcgaaga gacattcacg caaatcctcg
      661 gatttgcgga agggcgattt accgatctcg tcaacgacga acggttcgaa gcaaatgtca
      721 gctcgttcgt gagcgaacga ctcggcgatc tcgccggcac gcacgcgacg ctggccgaaa
      781 tgttcacgcc ggaaactgtg gcgctgatca aagatcgaat tacacaacag gtcgggccga
      841 ttgcggatca gttagctgac attgtcacca gtccgaccac ccgtaatcag atcggcgggc
      901 tgatcaaaca tgaagttgat gattactatc gcgacctttc cttcctaaaa aagattttca
      961 tctcgcgcga gcgcatctac caggaagttg acgacctggt tcacgcgacc atgccacgcc
     1021 gcgttgatga atacctgcgc gggccggcgt tcgccagcga agccacagtt ttcatcaaca
     1081 cgacggtcga taacttcatg acccggcctt tgagtgaatt ggtcgggcag gtttcttctg
     1141 agcgatttga gactattcgc cgcgaagcag gcgccaggtt cgtggccatg gcccgtagtc
     1201 ccgagctggc gcgatcggtt tcgacctacc tcacggatgc agtcgggcgt ttgcggccac
     1261 aaacattgcg tgaactgctc gagaggctga atccggagtc ggcgccacgg gtgaagaagt
     1321 tcctgaccgg cagcttgctg accgtgctcg ctcgggatga cacggcgcgg acgattaacg
     1381 caattctcag ttcgcagatt gagcggttcc tggtttcgcc gattggccgg ctcgccgatc
     1441 acatgcccga aggggccatc gaaaaagcga gtgtggctct caccggaaaa attaccgcag
     1501 ccgcgcgcga acgtttgccc gccgcgctcg cagaattcga cgtcggcggt ttagtgcgga
     1561 aaaaagtttc cgactacccg atcgacaagt tggaagagtt agtgctgatg gtagccaagc
     1621 atcatctgaa gacgatcgaa atgttcggcg ctattatcgg attttggatc ggcgttgcgc
     1681 aggcaatcta tttttggttt acgtacgtgc cgaggtgatg tggagtgcgc cggcagaacg
     1741 aagtggcgac ggcgcttttg atctgagttc gtggacagca tagaagatcc aaagcggcgt
     1801 cgcgtttcac ttgccgccgc actccaaata aattttcagt tgacattcat cgcgatagat
     1861 cataaacaat tgcacttgtt gaaaggagtc atccctgaat gacgtacgtt gttgttgagc
     1921 cgtgtgttga ttgcaagtac accgattgcg ctgcggtttg tcctgtcgaa gcttttcacg
     1981 aattaacaga tcgtctttat atcaacgccg acacctgcat cgattgtgat gcgtgcgtgc
     2041 ctgagtgtcc cgtcgaagcc atcttcgccg acacgagcct gccggagaat tatagcgagt
     2101 ggttgcagat caatattgac gaagcgccga aatatccggt gattagtcag aagattcccg
     2161 ctctgtttgg gccgaactgc aaaggccagc ccgaataaaa ttaattcgta gaattgaaat
     2221 ctgaattgaa agagtcggtg gaagtgtggg ttgtatcttt acggaccttc taaccgaact
     2281 cgtcgatttc ccgcagcgtt cgtttcgctt cttccaatcc gaactcgtgg gcctgtcgct
     2341 caagcactga gcgcgccaca tccgcatcga tcggatcgtg cagcagtgcg cgcaacagtg
     2401 acggcggcgc ctgcgtcaac acctcattag ccagcgcacg caccacgacg ttttgcgaac
     2461 gcgccatgtc gcacaactcg ctgggggcga gtcgcaccgc cattccattc gcgagctcat
     2521 ccagccgcgc aaactgctgg cgctcgtgcg cccgttgaat cagttgcccg aaaacttcgg
     2581 cggactgcgt ctgttgcgtc agcatctgaa cgcatgtatc cgccaaccgc cgcgcctgac
     2641 gcgcggagtc gtcttcggcc cctgcatctt tgcgctgagt ccgctcatca agcgccgcca
     2701 aaagtttgct tagctcgcgg tcggcgcggg gatcgtatgc gcgggactgt tcgaccggcg
     2761 cgggcggcgt ggattgccac gcacgctcaa gcaggttgcg ggtttgcggg cgcaaatcgt
     2821 tccagacgct ggtaactcgc gagccaaatt tttcgttaat catcgacatg gcgaacgttg
     2881 gccacattgt actacagccg ctacaactat tcgggcaata ctgctaagct tgctcccttc
     2941 tcatgcgaac aagacttccg aggttttgag tatggcgatc agcgaacagt tgctcgaaat
     3001 tctggtttgt ccggtgtgtc acgcaaaggt cgagttgagg ccagacggca gcggattgaa
     3061 gtgtgtctcg tgccggcgcg tctatccgat tcgcgacgac attccggtga tgctgattga
     3121 cgaagcgacc atcgaggatg aacagcctgc gggaaataat tgaagcttca ccgagcgttc
     3181 gccacctggc cttcgctgat caggagacct cggaaccgca gccgctcgcg gtcgcccgct
     3241 gggattggtc ggaagtgaaa cgcgtcctgg tgattcgcct cagatcaatc ggcgacgccg
     3301 tgctcacgac ccccgcattg ttcgccctgc ga
//
LOCUS       DATDBY010000102         2132 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1549489, whole genome shotgun sequence.
ACCESSION   DATDBY010000102 DATDBY010000000
VERSION     DATDBY010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1549489"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1279
                     /locus_tag="VIT19_02000"
     CDS             <1..1279
                     /locus_tag="VIT19_02000"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY5837777.1"
                     /translation="PSMIDQVKTTRLPNGLTILTEHMPGLRSVTFGIWVRRGSRHESA
                     PLNGICHFIEHALFKGTRTRSAHDIATESDRLGGHLDAYTSHEITGFSMKVVDTAMPA
                     AFDLLADMLANPRFDEDDLKREQSVIIEEMKMIEDTPDELLGELLNAAYFPDHSLGRP
                     IEGTVETVSNFDGEKTSAFHAQNYAPANLVIAAAGNIDHQRFVDLALKFFGGSNGHVG
                     NGFSGAAPAPAAPILIERKSELEQAHLIVAAPWPSARSEDRYVASMLGTIIGGGTSSR
                     LWQSIREDRGLAYAIGAGGNTFTDVGMFTIYAGVSPVHIDQVLDLSLKELRRVVREPV
                     PNDELKLAKDQAIASVLLSLESSSARAGALARQEIVHGRRIPPDQILQRIEAVTQEDT
                     LRLAQEHFTTPKLALGALGNLNGFVVDRARLEI"
     gene            1402..>2132
                     /locus_tag="VIT19_02005"
     CDS             1402..>2132
                     /locus_tag="VIT19_02005"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY5837778.1"
                     /translation="MKLSVLGSGSTGNAVLLVANGTRVLVDAGLSAREIGRRMSQLGE
                     DPNSLDGILITHEHGDHAGGLRVLMKDLDCPVYMSAKTRDAYVLDRRNATNEEPRRRA
                     DALRDRMVEIDSGQDFRIGAIDFHPFTVPHDAVDNFGFTATHNGVKVATLMDFGHVTT
                     LITQQLRGCAAIVIESNHSRDMLKTVENYPWELKQRILSRLGHLSNEDVAEWLVDGFD
                     GQASHIVLAHMSQRANNPYLAKITA"
BASE COUNT          462 a          609 c          617 g          444 t
ORIGIN      
        1 gccatcaatg attgatcaag ttaagacaac ccggcttccg aatggtctga ccattctgac
       61 cgaacacatg ccggggctta gatccgtcac ctttggcatt tgggtacggc gcggctcgcg
      121 acacgaatcg gccccactca acggcatctg ccacttcatc gaacatgctt tgttcaaagg
      181 cacgcgcacc cgatccgccc acgacatagc gactgagtcg gaccggctgg gcggccatct
      241 cgacgcttac acgtcccacg agatcaccgg gttttccatg aaagtggttg atacggcgat
      301 gccggctgcc ttcgatttgc tggcggacat gctcgccaat ccccggttcg acgaggacga
      361 tctcaaacgc gaacaaagcg tcatcatcga agagatgaag atgatcgaag acacgcccga
      421 cgaacttttg ggcgagcttc taaatgcggc ctacttcccc gatcactctc tcggacggcc
      481 gatcgagggc acggtcgaaa cagtttcgaa cttcgatggc gagaagactt cagccttcca
      541 tgcgcagaac tatgcgcccg caaatctggt gatcgcggcg gccggcaaca ttgatcatca
      601 gcgattcgtg gatctcgcgc tcaagttttt cggcggcagc aatgggcatg ttggaaacgg
      661 tttcagcggt gcggcacccg ccccggcggc tccgattttg attgagcgaa agagcgaact
      721 ggagcaggcg cacttgattg tggccgcccc ctggccctcg gccagaagcg aggatcgcta
      781 cgtcgccagc atgttgggaa cgattatcgg cggcggcacg tccagtcgcc tgtggcaatc
      841 gatccgcgaa gaccgtggtt tggcgtacgc cattggcgcc ggaggaaaca ctttcacgga
      901 cgtgggcatg ttcacgattt atgccggcgt gtcaccggtg cacatcgatc aggttttgga
      961 tttgtctttg aaagaactgc gtcgcgtcgt ccgcgaaccg gtgccaaatg acgagttgaa
     1021 actcgcaaag gatcaggcaa tcgcttcagt cctgttgagc ctggaatctt ccagcgcccg
     1081 cgccggcgct ctcgcgcggc aggaaatcgt tcatggccga agaattccgc ccgaccagat
     1141 cctccagcga attgaagcgg ttactcagga agacactctg cggctggcgc aagaacactt
     1201 cacaacgccc aagctggcgc tgggcgcgct gggaaacttg aatggctttg tggtcgatcg
     1261 agcacgcttg gaaatctaag agaataaatt agccgcggag acacccagat ctacgtggat
     1321 tatgatttgt tttctgatcc gcgaacatcc gcgtaaatct gcggctgaat tctgatcttt
     1381 ttcccgtata atccgcacga catgaaactt tcggttcttg gtagcggctc gacaggtaac
     1441 gcggtgctgc tggttgctaa cggcacgcgt gtgctggtcg atgccggcct cagcgcgcgc
     1501 gagatcgggc gccgcatgag tcagctcggc gaagatccca actcgctcga cggtattttg
     1561 atcactcatg agcacggcga ccacgcaggc gggctgcgcg tgctcatgaa ggacctcgac
     1621 tgtcccgtgt acatgtcggc gaagacgcgc gacgcttacg ttttagatcg acgtaacgcc
     1681 acgaacgaag aaccgcgccg ccgggctgac gccttgcgcg atcgcatggt cgagatcgat
     1741 tcgggtcagg actttcgtat cggagcgatc gactttcatc cttttacagt gccgcacgac
     1801 gcggtcgata actttggttt caccgccacg cacaacggcg tgaaggtcgc cacgctgatg
     1861 gattttggcc atgtcacgac gttgattacg cagcaactgc gggggtgcgc cgcgatcgtc
     1921 atcgaatcga accacagccg cgacatgctg aagacggtcg aaaactatcc gtgggaattg
     1981 aagcagagaa tcctttcgcg gctcggccac ctgtctaatg aagacgttgc ggaatggctg
     2041 gttgacggct ttgacggaca ggcgagtcac atagtgcttg cgcacatgtc gcagcgcgca
     2101 aacaatcctt atctggcaaa aatcaccgcg ga
//
LOCUS       DATDBY010000103         2267 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_928262, whole genome shotgun sequence.
ACCESSION   DATDBY010000103 DATDBY010000000
VERSION     DATDBY010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_928262"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /locus_tag="VIT19_02010"
     CDS             complement(<1..480)
                     /locus_tag="VIT19_02010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837779.1"
                     /translation="MDRMRVLYVEMAYGFGGSLTSLMPLFRNLPAEVEPVLVTGFDAR
                     RYVSLPDHVKYEQVAVPQVPDGPAGPVRQLKRFYQFNASPWMKQLSSIIKQHKPDLIH
                     TGNSAFYNAPAAFVGWRNKIPTIGFQKGFEYNGKPNRFVLRSGWYDHHVACSNAIANC
                     "
     gene            complement(497..2044)
                     /locus_tag="VIT19_02015"
     CDS             complement(497..2044)
                     /locus_tag="VIT19_02015"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEY5837780.1"
                     /translation="MLPEISSPPVVRDENSHFRTEHLKADLESRSMRGGALTLAAQVV
                     KFCVSMGATIIVARLLTPQDYGLVSMVVVLTGFLGMFQYLGLPAATIQWPELSHAQVS
                     TLFWVNVGLSTLIAVVVLVSSPLLVWFYNEPRLLGIAAGYAVVIFLTGLAIQHLAILQ
                     RQMRFVAFAAIDIGAVALGLAAAIVAALRGAGYWALVVNQFVFSVTTIVGAWTACRWR
                     PSLPRRGAGVGSILKYGGNLTGYSFTSFLAQNLDNALIGKFWGAYQLGIYSRAYQMLL
                     MPIGQIITPLATVAVPTLSRLADAPERYRNAYLRILERIAMLTMPLIAFMVATSDWIV
                     LLLLGPQWIEAGRIFMLLGMAAIFQPVARSGTWLFITQGRSREMLKWGLIGSSIAVVS
                     IVGGLPWGATGVAASYAITDLCIGTPLMFWYIGRKGPVGMRDVYRTIAPAILAAAGSL
                     IALLFLRQWLSSFAYLPVRLALALCITAALSLLVFTALPTGRLAMKSFTLALNFSKRG
                     RESVART"
     gene            complement(2064..>2267)
                     /locus_tag="VIT19_02020"
     CDS             complement(2064..>2267)
                     /locus_tag="VIT19_02020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837781.1"
                     /translation="LLYRLAFAIQVIGYVCAALSAALERVGIRSRMLALPQYFVLANL
                     ASVLALYKLVRGERYARWEPIRE"
BASE COUNT          571 a          658 c          630 g          408 t
ORIGIN      
        1 gcaattggca atcgcatttg agcaggcgac gtgatgatcg taccagccgc tgcgcagcac
       61 gaatcgattc ggcttgccgt tgtattcgaa tcctttttga aagccgatcg tgggaatctt
      121 gttacgccat ccgacgaatg cagccggcgc gttatagaag gcgctgttgc ccgtgtgaat
      181 gagatccggt ttatgttgtt tgattatcga tgacagttgt ttcatccacg gcgaagcatt
      241 gaattgatag aaacgcttta gctggcgtac cgggcctgcc gggccgtcgg gaacctgcgg
      301 aaccgcgact tgttcgtact ttacgtggtc gggcagtgaa acataacgac gcgcgtcgaa
      361 tcccgtaacc aacaccggct cgacttcagc gggcaggttt cggaacagcg gcataaggct
      421 ggtgagcgat ccgccgaacc cataagccat ctctacatac agaacacgca ttcgatccat
      481 tccgctcgtt cgttgctcat gttcgggcaa cggactcgcg tcctctcttc gaaaaattca
      541 aagccagcgt aaagctcttc atcgccaacc ttcccgtggg caaagccgtg aaaaccagca
      601 gcgacaacgc ggcggtaatg catagcgcga gcgccaaccg gacaggcaag taagcaaacg
      661 atgacagcca ttgacgcaag aacagcaatg cgatgagcga gccggcggcc gccagaatcg
      721 cgggcgcaat agttcggtag acgtcgcgca ttcccaccgg gcccttgcgg ccgatatacc
      781 aaaacatcag cggcgtgccg atacacaaat ccgtgatcgc atacgaagcg gcgacgcccg
      841 tagctcccca cggcaagcca ccaacgattg aaacgactgc gatgcttgat ccaatcaggc
      901 cccacttaag catctcgcgc gatcgtccct gagtaataaa aagccaggtg ccactgcggg
      961 caaccggttg aaagatcgcg gccatgccga ggagcatgaa gattcgtccc gcttcaatcc
     1021 actgtgggcc caggagcagc agaacgatcc aatcagaagt tgccaccatg aaagcgatga
     1081 gaggcatcgt caacatggcg atcctttcca ggattcttag gtacgcattg cggtaacgtt
     1141 caggcgcgtc ggccaaacgg ctcaacgtag ggaccgccac ggtcgccagc ggcgtaatga
     1201 tctgaccgat tggcatgagc agcatttgat aagctcggga gtaaataccg agttgataag
     1261 caccccagaa tttgccaatc agtgcgttgt ccagattctg ggcaaggaag ctggtaaagc
     1321 tgtatccggt aaggtttcct ccatatttca ggatcgaacc gacgcctgca ccgcgcctcg
     1381 gtagagatgg ccgccagcga catgccgtcc aggcgccgac gattgtcgtc accgaaaata
     1441 caaactggtt gacgaccaac gcccagtacc cggcgccgcg caacgcggca acgatcgccg
     1501 cagcgagacc gagtgccacc gcaccaatat ctatggccgc aaaagcgacg aaacgcatct
     1561 gcctttgcag gatagcgaga tgttgaatcg ccaggccggt gagaaagatc acaactgcat
     1621 accccgccgc gattccgagc aaacgaggtt cgttgtagaa ccagaccagc aaaggcgagg
     1681 acaccaacac caccacagcg atcagcgtgc tcaagccaac gttgacccaa aacagagtgc
     1741 tgacctgggc gtggctcaac tcaggccatt gaatcgtcgc ggcgggaagt cccagatact
     1801 gaaacattcc cagaaagccg gtgagcacca caaccatgct gaccaggccg tagtcctggg
     1861 gcgtcagcaa acgggccaca atgattgtcg ctcccatgct gacgcaaaac ttcaccactt
     1921 gcgcggcaag cgtcagcgct ccgccacgca tcgagcggct ttccaaatcc gctttcaagt
     1981 gttccgtgcg gaaatgactg ttctcgtcac ggacgaccgg cggcgatgaa atctcgggca
     2041 acattagaca acgaggcgat ggtttactcg cgaatgggtt cccaacgggc gtagcgctcg
     2101 ccgcgcacaa gtttgtaaag cgcgaggacg gaagcgagat tcgcgagcac gaaatactgc
     2161 ggcagcgcga gcattcgact acgaatgccg acgcgctcga gtgcggctga cagcgcggcg
     2221 caaacgtagc ctatgacttg aatcgcaaaa gcgagccggt aaagcag
//
LOCUS       DATDBY010000104         2879 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_973610, whole genome shotgun sequence.
ACCESSION   DATDBY010000104 DATDBY010000000
VERSION     DATDBY010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2879
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_973610"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1013
                     /locus_tag="VIT19_02025"
     CDS             <1..1013
                     /locus_tag="VIT19_02025"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEY5837782.1"
                     /translation="YGQIHSPGNEPSAITVGAANTFGTNERSDDEIASFSSRGPTRSS
                     WTDAFGLRHYDNLIKPDIVAPGNKLIYAAAVNNYLVTQNPSLDAGVSPVDRRRMMYMN
                     GTSMATPIVAAAAALMLQANPTLTPNLLKALLMYTAQPLAGFNMLEQGAGEINIDGAI
                     RLARLVSPDLNSLTPVGASLLTTLAPPVQQSTIAGQTFTWSGGLLFKHNFATGPELIT
                     KYQSIYRLGAVFGDAVLINNGAFMADRTILTGGVLVGDGVLVGDGTVLGSGSVFLTSG
                     VLVGDGVLVGDGVLVGDGVLVGDVCINGDSIAQALSARTKGDLTSQTNVEIDAGVDCL
                     DY"
     gene            1064..2023
                     /locus_tag="VIT19_02030"
     CDS             1064..2023
                     /locus_tag="VIT19_02030"
                     /inference="COORDINATES: protein motif:HMM:NF024898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5837783.1"
                     /translation="MRPYSSDPHHFTAATAVAKAVVPPGTAQLLKNNDAAEVLHFLEE
                     RARHNVVMSGFIRDNGIESELNRGMFYGSRDEDNRLQGVALIGHATFIDARREIVIPE
                     FARMAQTFPRIHMVLSELEIVEQFWRAYAPAGQELRRRCREVLFELNQVDENVEQVWE
                     LQTATPADLHQVAAAQAALAYQESGVSPLQKDRAGFLLRCQQRIERHRVWTLIRSGEV
                     IFKADIISETPDVIYLEGIYVNPNYRNKGLGSRCLTQLGRRLLNRAQFIVVLVNENRT
                     NAHRFFQRVGFVASSVYDTLFLAPSQGGDDRMTRRPVENWRTP"
     gene            2020..>2879
                     /locus_tag="VIT19_02035"
     CDS             2020..>2879
                     /locus_tag="VIT19_02035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837784.1"
                     /translation="MNRQLLKTVYMLVVIAAAALALLYSVVHLPIDKLDARFVALFLL
                     TIAISSRLTVRIPRTTGHISVSDTFFFLTILLYGGEAAVLLAAAEALCSATRFSRKSL
                     LFNSGMIACSTFLTFVVTRALFGELSTLHHGPFSGKFMLALCVMAFVQYASNSTMAAI
                     YTSLKMAEPLWHSWTKYYLWASITYFAGASAAGFTVKFAEAAGVYGLLATAPIVAVLY
                     FTYRTYLRNIEVMSAAAKAEEVAAHAEEAERHVAELNHYIEEQKRIREQFSQIEKMSA
                     LGELASGVAH"
BASE COUNT          605 a          822 c          831 g          621 t
ORIGIN      
        1 tctatggtca gattcattcg cccggcaacg aaccttcggc catcacggtg ggcgccgcga
       61 acaccttcgg caccaacgaa cgcagcgacg atgagatcgc gagctttagc tcgcgcggtc
      121 ccacccgtag ttcgtggaca gatgcattcg gcctcaggca ctacgacaat ctgatcaagc
      181 cggacattgt cgctccgggc aacaagctca tctacgcggc tgcggtcaat aattatctgg
      241 taacgcaaaa tccttcgctc gacgcgggcg tgagtccggt cgatcgccgc cggatgatgt
      301 acatgaacgg cacctcgatg gcgactccga tcgtcgcggc cgcagctgcg ttaatgctgc
      361 aagcgaatcc gacgctcacg ccaaatttgc tcaaggcctt gttgatgtac accgcgcaac
      421 cgctcgccgg cttcaatatg ctcgagcaag gcgccggcga aataaacatc gacggagcaa
      481 ttcgcctggc gcgactggtg agcccggatc ttaattcctt aacgccggtt ggcgcgtcac
      541 tgctgacgac gctcgcgccg ccggttcagc aaagcaccat cgccggacaa acgttcacct
      601 ggagtggcgg cctgcttttc aaacataact tcgcgaccgg accagagctg atcacgaaat
      661 accaatcgat ctatcgtctt ggggctgtgt ttggcgacgc tgtgctgatt aacaacggcg
      721 ccttcatggc tgaccgcacg atcctaactg gtggcgtgct ggtaggcgat ggcgtgctgg
      781 tcggcgacgg aaccgtcctc ggaagcggct ccgtcttcct aacgtccgga gtcctggtgg
      841 gcgatggcgt gctcgtcggc gatggggtac tggtcggcga cggtgtgttg gttggcgacg
      901 tctgtatcaa cggcgattcg attgcccagg cattgtccgc tcgaacgaaa ggcgatctga
      961 ccagccaaac caacgtggag atcgacgccg gcgtcgattg cctggattac tgagagcaac
     1021 ccttttcttc ggcatgacct gaagactcac cccaaggaga gacatgagac cctattcgtc
     1081 agacccccat cactttacgg cggccaccgc agtcgcaaag gccgtggtgc cgcccgggac
     1141 ggcacagctc ctgaaaaaca atgacgcggc cgaggtgctt cacttcctgg aagagcgcgc
     1201 acggcacaac gttgtgatga gcggcttcat tcgcgataac ggaatcgaaa gcgagctcaa
     1261 tcgcggcatg ttttacggct cgcgcgacga agacaaccgc cttcagggcg tggcgctgat
     1321 tggccacgca acgttcatcg atgcgcgccg cgaaattgtg attccagagt ttgcgcgaat
     1381 ggcgcagacc tttccacgaa tacatatggt cctgagcgaa cttgaaatcg ttgagcagtt
     1441 ttggcgcgcg tacgcgcccg cgggacaaga actgcggcgc cgctgtcgcg aagtactgtt
     1501 cgaactgaat caggttgatg agaatgtcga gcaggtgtgg gagctgcaaa cagcaacgcc
     1561 ggccgatctt catcaagtcg cggcggcgca ggccgcgctc gcctatcagg aaagcggtgt
     1621 tagcccatta caaaaggacc gagcaggatt tttgttgcgt tgccagcaac gcatcgaacg
     1681 ccaccgggtt tggacgctaa tccggagcgg agaagttatt ttcaaagccg acatcatcag
     1741 cgaaacgccg gatgttatct acctggaagg catttatgtg aatccgaact acagaaataa
     1801 aggactgggc tcgcgttgtt tgacgcagct cggccgacgc cttctaaatc gcgcccaatt
     1861 catcgtcgta ctcgtcaacg aaaacagaac taacgcgcac cgatttttcc aacgcgtcgg
     1921 gtttgtggcg agcagtgttt acgacaccct gtttttggcc ccctcgcagg gtggcgacga
     1981 tcgaatgacg cgccgcccgg tggagaattg gagaacacca tgaaccgcca acttctgaaa
     2041 acggtctaca tgcttgtcgt catcgcggct gcggcgcttg cgttgttgta ttcagtggtc
     2101 cacttgccaa tcgacaagtt ggacgcgcgc tttgtcgcct tgttcttgct gacgatcgcg
     2161 attagctcgc ggctaacagt caggattcca cggacgaccg ggcacatctc agtctcagac
     2221 acgttcttct tcttgacgat tttgctttac ggcggcgaag ccgcggtttt gttggcagcg
     2281 gccgaagcgc tttgttcggc gacgcgtttc agccggaaat cgctcttatt caactcggga
     2341 atgatcgcgt gctcgacctt ccttacgttc gttgttacgc gagcgctgtt tggcgaactc
     2401 agcacgcttc atcatgggcc cttctcggga aaattcatgc tggcgctatg cgtgatggcg
     2461 tttgttcaat acgccagcaa ctcaacgatg gccgcgattt acacttcgtt gaagatggct
     2521 gagccgctct ggcatagctg gacgaagtat tacctgtggg cctcgatcac ctattttgcc
     2581 ggtgcttccg cggccggctt cacggttaaa tttgccgagg ctgccggtgt ttacggactg
     2641 ttggccacgg ctccgatcgt ggcagttctc tatttcacct accggaccta tcttcggaat
     2701 attgaggtga tgtccgccgc cgcgaaagcc gaggaggtcg ccgcgcacgc cgaagaggcc
     2761 gaacggcatg ttgcggaact gaaccactac atcgaagagc agaaacgaat tcgcgaacag
     2821 ttttcgcaga tcgagaaaat gtcggctctg ggcgaactcg cctcaggcgt ggcgcatga
//
LOCUS       DATDBY010000105         9407 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1582529, whole genome shotgun sequence.
ACCESSION   DATDBY010000105 DATDBY010000000
VERSION     DATDBY010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 9407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9407
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1582529"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..903
                     /locus_tag="VIT19_02040"
     CDS             <1..903
                     /locus_tag="VIT19_02040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837785.1"
                     /translation="LKPQTVNEVSAGAEYEIARDLALGFRGIYRAQGTVIEDGSFDDG
                     NTYFIFNPGESETERLACADPTIGCFGRGRRYYRALEFTATKRFSNNYQFIASYVYSS
                     LLGNYEGLFRNDNGQSDPNITSLFDLVSLLANGYGRLPNDRPHQFKFDGSYRLPFDLN
                     ISGSFRAQSGIPFDQLIPHPVYGNNEGFAVPRGTAIVPAVTATVAGFPNEVNSIGSNR
                     TPTTFNLDLGAYYPIKFSENRQLRLQVDWFNVFNSQRAIRLDTTHTINSGAAGVAPVP
                     NPFFGSGTIFQFPSSLRLGVKFQF"
     gene            1084..2217
                     /locus_tag="VIT19_02045"
     CDS             1084..2217
                     /locus_tag="VIT19_02045"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5837786.1"
                     /translation="MFSPSNQTAILHLYSRCFSILVLTVLILLSAAPSFTQSGGGVDL
                     TGTNGRHSIQGRIYYPSGRSADSRLKVRLESPNTGGLSVLADANGHFSFRGLSPGRYD
                     IVIEGGDEYETARDYVYIDTEPRTRRTAAPAVARAFSVTFHLQPKRASGAGTKTGVLN
                     AALANVPVGVRELYLKALDASRTGDSLKAIELLKSALSLYPDFALALNELGIQYLKVG
                     QPDKAAEALRSTLRLAPDNFTARLNYGIALLNKREFAAAETQLRQALEKNSAAPTAHM
                     YLGIVLINLHKYDEAEKALRRAIESGGTSLSQAHYYLGGLYWHKQDYKRAAEELETYL
                     RLAPNAPDAERIRATIKDLRTKIAAAPRSPADLQPLKVSLILC"
     gene            2284..3351
                     /locus_tag="VIT19_02050"
     CDS             2284..3351
                     /locus_tag="VIT19_02050"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5837787.1"
                     /translation="MFSLKNLPYIQHKSVRRSLVAILLGLGAFTVALGQGGVGSTRGL
                     PSSGGGINIIKGRVVFPVEPKAGRRVKVRLTSTDLVEQSTVTSDDGSFIFNRLPAGHY
                     TVMVDAGSEFDQAAEGVNIDREVSAGGRNMTVNITLKLRGTAAALGRVPKEARESYTK
                     GVDAASKGEGQKAVEFLSNAVKLHPDFPQALTELGRQYLLLNQMGRAAETYQALLKLK
                     KDDASAHLNLGIALYNVSLALQSEKKTEEANQRLVEADQALRQSLALKMQGPNPHYYL
                     GLTLIRFRKYDEAQKEMELALANGGENLPLAHKYLGGLYISAKRNKEAADHLEKYLQL
                     EPKARDAEQIKTTIKDLRAKS"
     gene            3361..5121
                     /locus_tag="VIT19_02055"
     CDS             3361..5121
                     /locus_tag="VIT19_02055"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5837788.1"
                     /translation="MTFRMICRAAFALLVVSAAVLFPVVGLNQSNPSNPQTPPQDDVI
                     RVNTELVQTDVTVFDKKGRFVDGLAASDFELVIDGKPQDISFFERVASYTTERGKTSG
                     STTADNPAALSARQRTVLFFVDDLHLSATSIVRTRKSLMDFVNNGMVPNDQVAITSSS
                     GQIGFLQQFTGDRTVLQTAVARLNYRANAKFDMERPPMSEFQASRIQQGDESAVSYYV
                     AEMMKQNCFRVRGEFVCMMDTQSARNLVMQRAREITMSTAPDTKNTLLMLEGLMRTAA
                     QLPGRKLMFLISDGFYLNDPQTGSRDRIKKITDAAGRAGVVIYTLDARGLVTEALDVM
                     NDRPIDSEGLTMGATMGSIAASQDGLNALARDTGGEAFRNTNRPMAEWVRQVLDENST
                     YYVLAWRPLSDDQKGRGFKNVQIRVKGRPELTARMRRGYFRTTPLPMLSLRGKTDKGI
                     TERENDMRLVIDAPIEQRELKAELMVRLATMPGVGTRVLATVEIDRRGLAFDLFDGKP
                     AADVDIGGIFYDDKGKPKNSFVGRLRVSATDASELKEPAVYRFQAWLPAGLYQVRVGL
                     RDTRSGKTGSAVQWIKVPAL"
     gene            complement(5126..5788)
                     /gene="ribA"
                     /locus_tag="VIT19_02060"
     CDS             complement(5126..5788)
                     /gene="ribA"
                     /locus_tag="VIT19_02060"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: protein motif:HMM:NF001591.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEY5837789.1"
                     /translation="MGCNVTPIAVEPLVCPNAPPDLSVERVAVASLPTDWGEFNIAGY
                     RSKTSSEEFVVIFKGDLRPDVPTLVRIHSQCLTGDVFGSTKCDCGPQLHTTMRMIQEE
                     GRGALVYQQQEGRGIGIINKIRAYELQDKGADTVEANEQLGLAVDAREYRQCAEVLFD
                     LGLCKVRVLSNNPGKLKALEDAGLEIVERVAIEIPATARATAYLRTKKEKMGHLLELK
                     PR"
     gene            5996..6979
                     /locus_tag="VIT19_02065"
     CDS             5996..6979
                     /locus_tag="VIT19_02065"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEY5837790.1"
                     /translation="METNSEPNSGGTELSTTANKIAESHANRRPALVFMRGELLAVPI
                     PLERSEVTLGRALDADVRINDSEASRLHARIRTEQDETTGEARYRLIDLGSTNGILLN
                     GKPIEEAFLEDGDKFVIGDHLIRFEMLDEIDREFQQQIHRLLVHDDLTGLLTSKSFFS
                     ELRREAARAEADNKPFCVLMMDLDHFKEVNDTYGHLAGSETLEEMGTVIKNSLRAGDV
                     GARFGGEEFAAFLLDADYAQGMVAAERVRAAVEKHEFPAVRRGSTEEPRTHRMTISIG
                     VASFPNDASDPIQLVEKADSALYRAKRSGRNRVCAYTPSTKPPRKLVRPRS"
     gene            7015..7617
                     /locus_tag="VIT19_02070"
     CDS             7015..7617
                     /locus_tag="VIT19_02070"
                     /inference="COORDINATES: protein motif:HMM:NF023502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3558 family protein"
                     /protein_id="HEY5837791.1"
                     /translation="MRIFSLAFSLCVFTVTLAGCQSSDPHAASPPSSPAPSPGSSTPN
                     ASPSPIALKSRIDPCALITSDELKAVQSEALQTTFPSEREYGAYFIAQCYYQLPTITN
                     SVVVNVTTPKERGKSVKEFWRSTRAEAESGKKPEEKQSGPEKIAGVGEDAYWEASGIA
                     GALYVLKKDVILRISVGGASDIKTKLERSKTLAEKALARL"
     gene            7740..8321
                     /locus_tag="VIT19_02075"
     CDS             7740..8321
                     /locus_tag="VIT19_02075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837792.1"
                     /translation="MKRLALVAILICSFAIGTAAQQSESRVALNQPATAADTSGTPAV
                     EAALMTQVLNGADDSPVTNIKLVVKNVGGVFYTYITGWVTFYDSAGVRCGEGLFKVDA
                     LAVSESAATDAPGLRLRCSPSTWRIVATNLLTRAGDTAKPGESAPSSEGERPAPMNFI
                     ISIDGQEHPIQINNPIVLQMGARERRIVLRSAP"
     gene            8362..8562
                     /locus_tag="VIT19_02080"
     CDS             8362..8562
                     /locus_tag="VIT19_02080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837793.1"
                     /translation="MRRTNTLENIELEEYSHDRYRLWLIVGNERVWVDLSSNSDGHPD
                     RSLKRAWAEEQLGKSATDNSNQ"
     gene            complement(8611..>9407)
                     /locus_tag="VIT19_02085"
     CDS             complement(8611..>9407)
                     /locus_tag="VIT19_02085"
                     /inference="COORDINATES: protein motif:HMM:NF044708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050043 - lactate racemase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="lactate racemase domain-containing protein"
                     /protein_id="HEY5837794.1"
                     /translation="ALKEFSKVILTGAVGFHYFAGFTGGRKSICPGLASARTIESTHL
                     LAVDFERGGRRAGVGSGLLKGNAVSEECERVAAMIDPAFLINTIVDERGRPEQVFAGH
                     WRSAHERACEAYAATHSQTIAEKREVVIVSCGGAPYDINMIQAHKALDMAAHACVDGG
                     MIVLLAECGDGMGRPDFLKWFESEDSRALEMRLREHYEVNGQTAWALLTKTERFRVHI
                     MTKLPDADVRRMRLIPAPSIESVLAKIPETARGYIMPRGAALLPVV"
BASE COUNT         2112 a         2637 c         2672 g         1986 t
ORIGIN      
        1 ctgaaaccgc aaaccgtcaa cgaagtatcc gccggcgctg aatatgagat cgcaagagat
       61 ctcgcactcg gcttccgagg catctaccgc gcccagggca cggtgatcga agacggttca
      121 ttcgacgacg gtaacaccta ctttatcttc aacccgggtg agagcgagac cgagcgtctg
      181 gcttgcgccg acccgactat cggctgtttc ggacgcggtc gtcgttacta ccgcgcgctg
      241 gaattcacgg ccacgaagcg tttttcgaac aattaccagt tcatcgcttc ttacgtgtac
      301 tccagcctgc tcggcaatta cgaaggtctg ttccgcaacg acaacggtca gtctgacccg
      361 aacatcacca gcttgtttga cctcgtcagc ctgttggcga atgggtacgg gcgtttgccc
      421 aatgatcgtc cgcatcaatt caagtttgac ggcagctatc gccttccgtt cgacctgaac
      481 attagcggat cattcagggc tcagtcgggc attccgtttg accagttgat tccgcacccg
      541 gtctatggaa ataacgaagg gttcgcggtt ccgcgcggta cggcaatcgt cccggcggtt
      601 acggcaacgg tcgcgggctt cccgaatgaa gtgaatagca tcggctcgaa tcgcacgccg
      661 acaaccttca acctggacct cggcgcatac tatccgatca agtttagtga gaatcggcag
      721 ttgcgcttac aggttgactg gttcaacgtg ttcaattcgc agcgggcgat tcgcctggat
      781 acgacgcaca cgatcaacag cggtgctgct ggagtagcgc cggttccgaa tccattcttc
      841 ggctccggta caatcttcca gttcccatcg agcttgcgat tgggtgtgaa gttccagttc
      901 tagcaactaa atctttcgcg ggcctgtgac gattgcgcgc aggcatgtga gagtttcgaa
      961 agggagaagc gcagttctag cgcttctccc ttttcttttc cggtgatatc ttatcctcca
     1021 attacgaccg gatcttctcc atgtaagccc gacttacatc gccgcagaga aaggagtttc
     1081 caggtgttct cgccttcaaa tcaaaccgca atccttcatc tttacagccg atgtttttca
     1141 atccttgtac ttaccgttct gatactgctt tcggccgcac cctcgttcac gcaaagcggc
     1201 ggcggggttg atttgacggg caccaatggc cggcactcta ttcagggtcg tatttactat
     1261 ccttcagggc gatctgcgga ctctcgtctg aaagtgaggc tcgaaagccc aaacactggc
     1321 gggctttctg tcctcgcaga tgccaacggt cactttagct ttcgtgggct gtcccctggc
     1381 cggtacgaca tcgttatcga aggaggagat gagtacgaaa cagccaggga ctacgtttac
     1441 atcgacaccg aaccgcgcac gcgaagaacc gccgcaccgg cggtcgcgcg cgctttttcc
     1501 gtgacgttcc atctgcaacc caagcgagcc tccggtgccg gcacaaaaac cggagtgctg
     1561 aatgcagctt tggcaaatgt tccggttggc gtgcgggaac tctatctaaa agcgcttgac
     1621 gcttcccgca ccggagacag tctgaaagca atagaacttt tgaagtctgc gctttcgctt
     1681 tatcccgact ttgcactggc cctgaacgaa ttaggcattc aatatctgaa agtgggtcag
     1741 ccggacaaag ccgctgaggc cttgcgctca accctaaggc tagcccccga taactttacc
     1801 gcgcgcctga attatggaat cgcacttctg aataagcgag agttcgccgc tgctgaaacg
     1861 cagttgcgcc aggccctgga gaagaactcg gccgcgccaa ccgcccacat gtacttaggc
     1921 atcgtgttga ttaacttgca taaatacgat gaagcagaaa aggcgttgcg gcgcgctatc
     1981 gaatcgggcg gcaccagtct cagtcaagcc cattactacc tgggcgggct ttattggcac
     2041 aaacaagatt acaaacgcgc agcggaagag ctggaaacct atctgagact ggccccaaat
     2101 gctcctgacg cggaacgcat tcgtgcgacg atcaaggact tacgcacgaa gattgcggca
     2161 gcgccgcgtt ctccggcaga tttgcagccg cttaaagtct cgctcatact gtgttaacgc
     2221 ggcacgtatc ttcccagacg gttctcaaaa agatctgaac aacaaataga gggagacggt
     2281 gaaatgtttt ctctaaaaaa tttaccttac attcagcata aatctgttcg cagatcgctc
     2341 gtcgcgatcc ttttgggtct cggcgctttt acggtagcgc ttggtcaggg aggagtaggc
     2401 agcacgcgcg gcctgccaag ttccggcggc ggcatcaata ttattaaggg gcgcgttgtt
     2461 tttccggtag aaccgaaagc cggccgtcgc gttaaagtga gattgactag taccgactta
     2521 gtggaacagt ccaccgttac cagtgacgat ggatcgttta ttttcaaccg ccttccggcg
     2581 ggacactata cggtcatggt ggacgccggc agcgaatttg accaggccgc tgaaggggtc
     2641 aacatagatc gagaagtcag cgcgggcggc cgtaacatga ctgtcaatat cactttgaag
     2701 ctgcgaggca cggccgcggc tttgggacgg gttcctaaag aggcccgcga gtcctacacc
     2761 aaaggagtgg atgccgccag caaaggcgaa ggtcagaaag cggttgagtt tctctcaaac
     2821 gcagtgaagc ttcatccgga ttttccgcag gcactgacgg aactcggccg gcaatacctc
     2881 ctgctcaatc agatgggtcg cgcggctgag acgtatcagg ctttgctaaa gctaaaaaag
     2941 gacgatgcca gcgcgcatct gaatctgggg attgcgctct acaacgttag tctcgcgttg
     3001 cagagtgaaa agaaaaccga ggaagcgaat cagcgcctcg ttgaagccga tcaagccttg
     3061 cgtcagtcgc tcgcgctgaa aatgcaggga ccgaatccgc attactacct cgggctcacc
     3121 ttgatcaggt ttaggaagta cgacgaagcg cagaaagaga tggaactggc ccttgccaat
     3181 ggtggcgaga acctgccgct cgcgcacaag tatctcggcg ggctatacat cagcgccaag
     3241 cggaacaagg aagctgcgga tcaccttgag aaatacctcc agcttgagcc caaagccaga
     3301 gacgccgagc aaatcaagac cacgattaaa gatcttcgcg caaaaagtta gagcaagact
     3361 atgacctttc gaatgatttg ccgcgcggct ttcgctttat tagttgtgag cgcagcggtc
     3421 ttgtttcccg ttgtcgggct gaatcagtca aacccgtcga atccgcaaac gccgcctcag
     3481 gatgacgtaa tccgcgtcaa cactgagttg gtacagactg acgtcacggt cttcgacaaa
     3541 aaagggcggt tcgtcgacgg gctcgccgcc agcgatttcg aattggtcat cgatgggaaa
     3601 cctcaggaca tttctttttt tgagcgagtc gcttcttaca cgacggagcg cggaaagact
     3661 tcaggttcaa ccacggccga caatcctgcg gccctatcgg cccgacaacg cacagtgttg
     3721 tttttcgtcg atgacctgca cctgtcagcg accagcattg tgcgtacgcg caaatcgctc
     3781 atggattttg tgaacaacgg catggttccg aatgatcagg tggcgattac gtcgtcgagc
     3841 ggtcagattg gatttctgca acagttcact ggcgaccgga ccgtcttgca gacggcggtg
     3901 gcccgcctga actatcgcgc gaatgcgaag ttcgacatgg aacggccgcc gatgtcggag
     3961 ttccaggcgt ccaggattca gcaaggcgac gaaagcgcgg tcagctacta cgttgccgaa
     4021 atgatgaagc agaattgttt cagggtccgg ggcgagtttg tctgcatgat ggacactcaa
     4081 tcggcgcgta acctggttat gcagcgggcc cgcgagatta cgatgagcac ggcgcccgac
     4141 accaagaaca cgctcctgat gctcgaaggg ttgatgcgca cagccgcgca actgccggga
     4201 cgaaagttga tgttcctgat ttcggacggc ttctatctga acgatccgca gacgggatcg
     4261 cgggatcgaa tcaagaagat cacggacgcg gccggacgcg cgggcgtggt gatttatacg
     4321 ctggacgctc gcgggctcgt cacggaagcg ctcgacgtta tgaacgatcg gcccatcgat
     4381 tcggaaggac taacgatggg cgccacgatg ggcagcatcg ccgcctcaca ggatggatta
     4441 aacgcgctgg cccgtgacac tggcggcgag gcttttcgca atacgaatcg cccgatggct
     4501 gagtgggtaa ggcaagtgct ggatgaaaac tcgacctatt atgttctggc ctggcggccg
     4561 ctcagcgatg atcaaaaggg acgcggcttc aagaacgttc aaatccgggt aaaaggccgg
     4621 ccggaactca ccgctcgcat gcggcgtggt tatttccgca ccacgccatt gccaatgctt
     4681 tcgttgaggg gaaagactga caagggcatc actgagcgtg agaatgacat gcgtcttgta
     4741 attgacgcgc cgatcgagca gcgggaacta aaagcggagc tgatggtccg tctggcgacg
     4801 atgccgggcg tgggcacgcg agttctcgcc actgttgaga ttgatcgtcg ggggttggcg
     4861 tttgatttgt tcgacggcaa gccggccgct gacgtcgata tcggcggcat cttttacgac
     4921 gacaaaggaa aacccaagaa tagttttgtc gggcgtctgc gagtctcagc gacggatgcg
     4981 tctgagttga aggagcctgc ggtctatcgc tttcaagcgt ggctacccgc ggggctgtat
     5041 caggttcgtg ttgggttgcg agatacgcga agtggaaaga cgggtagcgc ggtgcagtgg
     5101 atcaaagtac cggcgctgtg aaggcctagc gaggtttcaa ctccagcagg tggcccatct
     5161 tctctttctt ggtccttagg taagctgtcg cgcgagcagt cgccgggatc tcgatcgcca
     5221 cccgctcgac aatctccaac ccggcgtcct ccaaagcctt tagctttccc ggattgtttg
     5281 aaagcacacg cactttgcat aagccgagat cgaacaaaac ttcggcgcac tgacgatact
     5341 cgcgagcatc gacggcgaga ccgagctgct cgttagcttc gacggtgtcc gcgcccttgt
     5401 cctggagttc gtacgcgcga atcttgttga tgatgccaat gccgcggcct tcctgctgct
     5461 gataaacgag cgcgccgcgc ccttcctcct ggatcatccg catcgtcgtg tgcagttgcg
     5521 gcccacaatc gcacttcgtc gatccaaata cgtcgcccgt caggcactgc gaatgaattc
     5581 tcaccagcgt cggaacatcg gggcgcaggt cgcctttgaa gatgacgaca aattcttcgc
     5641 tgctggtttt cgaccgatag ccggcgatgt tgaactcgcc ccaatcagtc gggaggctcg
     5701 cgacggcgac gcgctcgact gacaagtcgg gcggagcgtt cggacaaacc agcggttcaa
     5761 ctgcgatagg ggttacgttg catcccattg aaagctttga gcctcagtgg cccacctcag
     5821 atttatgtca aatctctgac ctgaattata gtgtcgtccg ttgcagaccg acaaggcggg
     5881 gttttcctca ggatttagct gcaaatcaaa ctattgctgc gcgacgaacc ggcgcgataa
     5941 gatacctgag gcgcgcgcga agcctgagaa cgctgcccga ctgagccgcc caccgatgga
     6001 aaccaatagc gaacccaatt ctggaggcac cgaattaagc acgaccgcga acaagatcgc
     6061 tgagtcgcac gccaaccggc ggcccgcgct cgtgtttatg cgcggcgagt tgctggcggt
     6121 gccgattccg ctggagcgaa gcgaagtgac gctggggcgg gcgctcgacg ccgatgtgcg
     6181 tatcaacgat tccgaggcct cccggttgca cgcgcgcatc cggactgaac aggacgagac
     6241 gaccggcgag gctcgctatc gtttgattga tctcggatcg acgaacggca tcttgcttaa
     6301 cggcaagccg atcgaagaag cctttctcga agacggcgac aaattcgtca tcggcgatca
     6361 cctgattcga tttgaaatgc tcgatgaaat cgatcgagag tttcaacaac agattcatcg
     6421 cctgctggtt cacgacgatc taaccgggct gcttaccagc aaatcattct tttctgagct
     6481 gcgtcgtgaa gccgcgcgcg ccgaagctga caacaaaccg ttctgcgtgc tgatgatgga
     6541 tctcgatcac ttcaaagaag tgaacgacac ctatggccat ttggccggta gcgagacgtt
     6601 ggaggaaatg gggacggtca ttaagaattc cttgcgtgca ggcgatgtag gggcgcggtt
     6661 tggcggcgaa gagttcgcgg cattccttct cgacgctgat tacgcgcagg gcatggtcgc
     6721 ggctgagcgc gtgcgcgccg ccgtcgagaa gcacgaattt ccggccgtcc gtcggggcag
     6781 cactgaggaa ccccgcacgc accggatgac gattagcatc ggcgttgcgt cgttcccgaa
     6841 cgatgccagc gatccaatcc aattagttga aaaagcagat tccgccctct accgggcgaa
     6901 acgaagcggc cgcaatcgcg tgtgcgcgta cacgccgagt accaagcccc ccaggaaatt
     6961 agttcgcccg cgaagctgaa tcgagaatac tcttcgtata caatcagcga tgtgatgcga
     7021 atcttctcac ttgccttttc gctgtgtgtg ttcacagtaa cgctggccgg atgccaatcg
     7081 tcggatccgc atgctgcgag tccgcccagt tcgccggcgc cgagtccggg cagctcaacg
     7141 cctaacgcga gcccctcgcc gatcgcgcta aaatccagaa tcgatccctg cgcattaatc
     7201 accagcgatg agttaaaggc cgtgcaaagc gaggctttgc aaacgacttt tccttccgag
     7261 cgcgagtatg gcgcatattt catcgcgcag tgctattacc aactaccgac gatcacgaat
     7321 tcggtggtcg tcaacgtcac gactccgaaa gaacgcggga agtctgtgaa agagttttgg
     7381 cgaagcacgc gcgccgaagc tgaaagcgga aagaaacccg aagaaaagca atcgggcccg
     7441 gaaaagattg ccggagttgg cgaggacgca tattgggaag ccagcggaat tgccggcgcc
     7501 ctgtacgtcc tgaagaagga tgtaatcctt cgcatcagtg tgggcggcgc aagcgatatt
     7561 aaaaccaagt tggaaagatc caagacgctc gcggagaaag cactcgcgcg gctttagctt
     7621 acgggtcgct tcgatcctta cgtccgaggt ttttttgtag ctcagcgctt catcgctggg
     7681 tcaccagttc aatatgatgt tcccggccgc tttagcggcg ggatatccgg agggctacta
     7741 tgaaacgtct ggcacttgtc gcaattttga tttgctcgtt cgcaatcggc accgccgcgc
     7801 agcaatccga atcgcgggtt gccctaaacc aaccagcgac tgccgccgac acgagcggca
     7861 cacccgcggt tgaagctgcg ctgatgacgc aggtgctcaa cggcgcagat gattcgccgg
     7921 tcacgaatat caaattggtg gtgaagaacg tcggcggcgt tttctacacg tatatcacgg
     7981 gctgggtgac cttttacgat tccgcgggcg tgcgctgcgg cgaagggctg tttaaagttg
     8041 atgcgttggc cgttagtgag tcagccgcga cagacgcgcc tggattgcgt ctgcgctgct
     8101 cgccttccac ctggcggatc gtcgcgacaa acctgctgac gcgagctggc gacaccgcga
     8161 aaccgggcga atcagcgcca tcaagcgaag gcgaaaggcc cgcgccgatg aacttcatca
     8221 tcagcatcga cggccaggag catccgattc aaatcaacaa tcctatcgtc ctgcaaatgg
     8281 gcgctcgcga acggcgaatt gtgctgcgga gcgcgccgta aatttggagt gcggcggctt
     8341 gacgccgctt ttggatctgt tatgcgacga actaacactc tcgagaatat tgagctagag
     8401 gagtacagcc atgaccgcta cagactttgg ttgatcgttg gaaatgagcg cgtctgggtt
     8461 gatttatctt caaacagcga cggccatccg gatcggtcac taaagcgcgc gtgggctgaa
     8521 gaacaattag gcaaatcggc aaccgacaat tcaaaccagt aatactcacg gctggcaatc
     8581 caaagcgccg tcaagccggc gcactccaaa ttaaaccacc ggcaatagcg ccgcgccacg
     8641 cggcatgatg tagcccctcg ctgtttcggg aatcttcgcc agaactgact cgatcgatgg
     8701 tgcgggaatc aaccgcatgc gtcgcacgtc tgcgtccggc agcttcgtca tgatgtgaac
     8761 gcgaaagcgt tccgtcttcg tcagcaaagc ccaggcggtc tggccgttta cttcgtagtg
     8821 ctcccgcaaa cgcatctcca acgcgcgcga atcttcagat tcaaaccatt ttagaaagtc
     8881 cggccggccc attccatcgc cacactcggc cagcaaaaca atcatgccgc cgtcaacgca
     8941 ggcgtgcgca gccatgtcga gggctttgtg cgcttggatc atgttgatgt cataaggcgc
     9001 gccgccacaa ctgacgataa ctacctcacg cttctcggca atcgtttgcg agtgagttgc
     9061 cgcgtaggct tcgcaggccc gctcgtgcgc gcttcgccag tggccggcaa agacttgttc
     9121 gggccggccg cgttcatcaa cgatggtgtt gatgagaaat gccggatcga tcatggcggc
     9181 gacccgttcg cattcctcgc taaccgcatt gcctttcagc aagcctgagc cgacgcctgc
     9241 gcgacgcccg ccgcgctcaa aatccaccgc cagcaggtgc gtcgattcga ttgtgcgtgc
     9301 cgacgcgagg ccgggacaga ttgatttgcg gccgccggta aatcccgcga agtagtgaaa
     9361 ccctaccgcc cccgtcaaaa tcactttcga gaattccttc agtgccc
//
LOCUS       DATDBY010000106         2060 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1779802, whole genome shotgun sequence.
ACCESSION   DATDBY010000106 DATDBY010000000
VERSION     DATDBY010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2060
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1779802"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..498)
                     /locus_tag="VIT19_02090"
     CDS             complement(<1..498)
                     /locus_tag="VIT19_02090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837795.1"
                     /translation="MAISFMTGLTANYRESESDAGRMPALPAVEYDIIIRNGRVIDGS
                     GRRGVNADVAIKADRIARIGNLRGAKATREIDARGQVVAPGFIDMLGQSEQFLLVDGR
                     AMSKVMQGVTTEITGEGESIAPINDQILKEQEAFNRKYNLTVDWRTFDQYFRRLERQG
                     IGVNLG"
     gene            1012..>2060
                     /locus_tag="VIT19_02095"
     CDS             1012..>2060
                     /locus_tag="VIT19_02095"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008765 -
                     UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEY5837796.1"
                     /translation="MKDKPITVAHVAEVVAGRVFGPSDAVVTDVTHDSRHAKAGTLFA
                     AIRGELFDAHKFIPQVMQQGAEGVISEAEQPADFTGAWIQVANIRRSMALAAAEVHHH
                     PSRELNLVGITGTNGKTTTAYLVASIPEAAGELVAMTGTVEYRLGKERLKAGRTTPEA
                     TDMQRMLREAVSIGCKTAVMECSSQAMDFHRCDSLDYAVAVFSNLTRDHLDYHKTMEN
                     YWYAKQRLFDGRLGSRPKTSVINLDDPYGVELADRLKSDGLRVVTYAVKAKADITAHD
                     LEFSLAGMRFRLRTEAGTHASGVLAGSVPTEVDFASPLVGPPHVFNTLAAVASGLSLG
                     YSLEVITKALGKCTGA"
BASE COUNT          438 a          570 c          581 g          471 t
ORIGIN      
        1 gccgaggttg acgccgatgc cttgtcgttc cagtcgcctg aagtattgat cgaaagttcg
       61 ccaatcaacg gtgaggttgt acttgcgatt gaaggcttcc tgctctttca gaatctgatc
      121 gttgatgggc gcaatcgatt cgccttcgcc cgtgatctca gtcgtcacgc cctgcatgac
      181 tttgctcatc gcgcgtccgt caaccaggag aaactgctct gactggccga gcatgtcgat
      241 gaagccgggc gcgacaactt gcccacgagc atcgatttca cgcgtcgctt ttgcaccgcg
      301 aagattgccg atgcgcgcga tgcgatcggc tttgatcgcc acgtctgcat tcacgccgcg
      361 gcgcccactg ccatcgatga ctcgtccatt gcgtatgatg atgtcgtatt caactgctgg
      421 gagcgcgggc atcctgcccg catccgattc agattcgcgg tagttcgcgg taagtccggt
      481 catgaagcta atggccatcg ttcccagaca tattaaactg atcagtaatc tcacttgatt
      541 gacctccggc agctttgcct caagagtccg aagaggcagc tctcattcac accgggcttt
      601 agcccggtga ttataagggt gcgagagact agtgaaccgt tttaacggtt tactggtcct
      661 ctcaatacac ccaggcgatt gcctacgaag aacttgccct gcaaacgaca tggagaaacc
      721 gttgaaacgg ttcctctgat tctcaccgtc ttttatcacc gggctgaagc ccggcgtgaa
      781 tgagagcaag actctcagac tcttgaggca aagcgacctc cggcagcata tcggaaaacg
      841 gcggcgttga ttataatcac gaatctttga tttgagtcta atttggagtg cggcggcttg
      901 acgccgcttt tcatttgatt agactcgcaa cccgcgattt gaaagcgccg ccaagtcggc
      961 gcactccaaa gctcgctatc gctcgcggtt ttgtatagtg ctcatacaaa cgtgaaagac
     1021 aaaccaataa ccgtcgccca tgttgccgag gttgtagccg gaagagtctt cggtccgtcc
     1081 gacgccgtcg tcaccgatgt cacgcatgat tcgcgtcacg cgaaggccgg aactttgttt
     1141 gccgctatcc gcggcgaatt gttcgacgcg cacaaattca ttccacaggt gatgcagcag
     1201 ggcgccgagg gcgttatctc cgaagcggaa caacctgccg atttcacggg agcctggatt
     1261 caggttgcga acattcgccg ctcgatggcc ctggctgctg ccgaagttca tcatcatcct
     1321 tcacgtgaat tgaatctggt cggcattacc ggaaccaacg gaaagacgac gacggcgtat
     1381 ctggtggcct cgattcctga agcggccggc gaactagtgg cgatgactgg cacggtcgaa
     1441 tatcggcttg gcaaggaaag actaaaggcg ggccggacga ctccggaagc cactgacatg
     1501 cagcgaatgt tacgcgaggc cgtgagcatt ggctgcaaga ctgcggtcat ggaatgctct
     1561 tcgcaggcga tggattttca ccgttgcgac tcgctggact acgcggtggc cgtcttctcg
     1621 aatctcacgc gcgaccacct cgactatcac aagacgatgg aaaactattg gtacgcgaag
     1681 cagcgtctgt tcgatgggcg gctgggatcg cggccaaaga cttcagtcat caatcttgat
     1741 gatccctatg gcgttgagtt ggctgatcga ctgaagagcg acggtctacg cgtcgttacg
     1801 tatgcggtga aagccaaggc cgacataacc gcgcacgacc tggaattctc tttggctgga
     1861 atgcgatttc gtttgcgaac ggaagcaggt acgcacgcgt ctggcgtgct ggctggaagc
     1921 gtgcctaccg aagttgattt cgcctcgcca ctggtcggcc cgccgcacgt gttcaacact
     1981 ctggccgcgg ttgcgagcgg cctttcgctc ggttattcgc tcgaggtgat tacgaaagcg
     2041 ctggggaaat gcacgggcgc
//
LOCUS       DATDBY010000107         2572 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_86091, whole genome shotgun sequence.
ACCESSION   DATDBY010000107 DATDBY010000000
VERSION     DATDBY010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2572
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86091"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="VIT19_02100"
     CDS             complement(<1..330)
                     /locus_tag="VIT19_02100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837797.1"
                     /translation="MLDKLLQPRLPSAAVGIESSTASVVQLDRARGAFVIKRAATVNL
                     PANLVKASFDESNIAEPDALLESLSDLVTSAGLLRQRKWSVTLPEATTRSAILTIEAA
                     GGSRREIE"
     gene            complement(425..805)
                     /locus_tag="VIT19_02105"
     CDS             complement(425..805)
                     /locus_tag="VIT19_02105"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEY5837798.1"
                     /translation="MRQRGFTLLELMIVISIIIILAAVALPQYHKTIMHARETVLRDD
                     LYRMRSLIDQYSADKGRLPQSLDDLVSAGYMREIPTDPITDQKEWNIEVGEDPYSSEG
                     GSGIRDIHSTSPEVSTEGTPYSQW"
     gene            complement(882..1583)
                     /locus_tag="VIT19_02110"
     CDS             complement(882..1583)
                     /locus_tag="VIT19_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEY5837799.1"
                     /translation="MKVRTRHSFRMTRDARLPQRGFSLIELVITVAVLAILTLGVIPL
                     VQVSVKRQKEEQLRAALREMREAFDQFRREALVGAQMQAMQGQGSTAQQEQAPRQPQA
                     QTQTGLFSDPRVRVFITDQTIFGVDNPDRFPPDLETLVNGVDVLPITAGGLGRRGNMS
                     FSATEAASQDSLIPKIKIYLRRIPVDPMTGKADWDLRSSYDSADANSWGGENVFDVRS
                     KSEGTALNGQKYRDW"
     gene            complement(1601..>2572)
                     /locus_tag="VIT19_02115"
     CDS             complement(1601..>2572)
                     /locus_tag="VIT19_02115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837800.1"
                     /translation="TTGSLEAMLRENYREEQILAARRIPKEVNVQLPDAPAYVPAAST
                     ETPTQAAANNGAATQTTPTQTVTVAQNNGVTAKTEPAALTTSQAPATNGTNSATANDS
                     AMPQPKAASFAPQTTVTDTNKLDVATAIKSVVTPTTEVTATSATAKTDANVTAPVEDL
                     APKPAVTDVTAKSAPLPAVIELGFASETAELTVGEKLQLSLDLNSPAPLGVAVVMIRF
                     DPNILRITNVTAGKILTDAKSGATISVMKNEGGVLLVSISPAAGATISGEGALLNLEV
                     EGLAGGSSSLAFDLSSVHIVTADGSASVVQVSSPVAVAVKAAAAAKP"
BASE COUNT          481 a          745 c          767 g          579 t
ORIGIN      
        1 ttcaatttcg cggcgtgatc cgccggcagc ttcaatcgtc agaattgcgg aacgagtcgt
       61 agcttcgggc aaggtgactg accattttcg ctggcgcaac aagccggcgc tggtcaccag
      121 gtccgacaaa gattcgagca gcgcgtccgg ctcggcaatg ttgctttcat cgaagctggc
      181 tttgactagg ttcgccggga gattcacggt cgcggcgcgt ttgattacga aggcgccgcg
      241 ggcgcggtca agctgcacta ctgatgcggt gctgctttca atgccgacgg cggcagaggg
      301 aagtcgtggt tggaggagtt tatctagcat tttgtcagtg gtcagtggac agtggtcagt
      361 gggtgactag gatgcggccg gatctgaatt gcaactgaca actgactacg aacaacggac
      421 caaattacca ttggctgtac ggcgtaccct cggtcgaaac ttcgggagac gtactgtgga
      481 tgtcgcggat accgctgccg ccttcgctcg aataaggatc ttcgcctact tcgatattcc
      541 actctttctg atcagtgatc ggatcggttg gaatctcgcg catgtagccg gcgctgacga
      601 ggtcgtcaag cgactgcggc agccttcctt tgtcggcgga gtactgatcg atcaacgagc
      661 gcatccggta aagatcgtcg cgcagaacgg tttcgcgcgc gtgcataatc gtcttgtgat
      721 actggggcag ggcgaccgcg gccagaataa tgatgatcga gattacgatc atcagttcca
      781 gcagggtgaa gccgcgctgg cgcacggttg caatgcggca agggccaagg gcaaaccgcg
      841 acctcttccc ctgtcccctt tccccttggc tctttgccgc gctaccagtc acgatacttc
      901 tgtccattca gtgcggtgcc ctctgacttt gatcgcacgt cgaaaacgtt ttcgccaccc
      961 caggaattgg cgtccgccga atcataagat gagcgcagat cccagtcagc cttacccgtc
     1021 attggatcga cggggatgcg gcgaagataa atcttgatct tcggaatcag tgaatcctgg
     1081 ctggccgctt cggtcgcgct gaaactcatg tttccgcgac ggcccagacc ccctgcggtg
     1141 attggcagta cgtcgacccc gttgaccagc gtctcaagat cgggcggaaa acgatccgga
     1201 ttatcgacgc caaagatagt ttggtcagtg atgaaaactc gtacgcgcgg gtcgctgaaa
     1261 agaccagtct gcgtttgcgc ttgtggctgc cgcggcgcct gctcttgctg cgcggtcgaa
     1321 ccctgcccct gcattgcttg catttgcgca ccgactaaag cttcgcggcg aaactgatcg
     1381 aaggcttcgc gcatttcgcg caacgctgca cgcagttgct cctccttctg ccgtttgacg
     1441 gaaacctgaa ccagcggaat cacgccaagc gtcaaaatcg ccaacacggc gaccgtgatc
     1501 accaactcga tgagggagaa cccgcgttgc gggagtcgcg cgtcgcgagt catgcgaaac
     1561 gaatgccgtg ttctgacctt cacagccaaa tcctcctaag ttacggcttc gctgccgccg
     1621 ccgctttcac agcgacagct acaggtgaag acacctgaac taccgaggcg ctgccgtcgg
     1681 cggtgacgat gtggacgctc gaaaggtcga acgccagcga actgctaccc ccggcgagac
     1741 cctcaacttc gaggttgagg agcgcgcctt cgcccgagat cgtggcgccg gccgccggcg
     1801 aaatcgagac gagcaggaca ccaccctcat tcttcatgac ggaaatagtt gccccggatt
     1861 tcgcatcggt cagtatcttc ccagccgtca cgttagtgat tctcaaaatg tttggatcaa
     1921 agcgaatcat cactaccgcg acgcccaacg gggccggcga attcaggtca agcgagagtt
     1981 gaagcttctc gccgactgtt aactcggctg tctccgacgc aaaccctaac tcaatgacgg
     2041 ccggtagtgg cgccgacttc gccgtcacgt cagtcacggc cggtttcggc gcgaggtctt
     2101 cgaccggcgc cgttacgttt gcgtcggtct ttgcggtggc cgaggtcgca gtgacttcag
     2161 tggtcggcgt gaccacactt ttgatcgcgg tcgccacgtc gagtttgttt gtgtcagtaa
     2221 ccgtggtttg cggcgcgaac gaagctgctt tcggttgcgg catcgccgaa tcgtttgcag
     2281 tggccgagtt tgtgccgttg gtggccggcg cttgacttgt cgtcagtgct gcgggctccg
     2341 tcttcgcggt gacgccgttg ttctgcgcta cggtgactgt ttgcgtcggc gttgtttgcg
     2401 tcgccgcgcc attgttggcc gccgcttgcg tcggtgtttc agtgctggcg gccggaacat
     2461 atgctggcgc gtcaggcaac tgaacgttca cttctttcgg tatccggcgc gccgcgagta
     2521 tctgttcctc gcgatagttt tcgcgcagca ttgcttcgag cgagcccgtc gt
//
LOCUS       DATDBY010000108         4083 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_319552, whole genome shotgun sequence.
ACCESSION   DATDBY010000108 DATDBY010000000
VERSION     DATDBY010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4083
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319552"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..611
                     /locus_tag="VIT19_02120"
     CDS             78..611
                     /locus_tag="VIT19_02120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837801.1"
                     /translation="MSTPSTTPNEPALLRDAGGRIDYDSIPDVIQWFLDYDERVAIIK
                     HPKIEELFQWKQQQSRDAGEEVFNFSRAEDRLAIGIIQSLAHNQTEEALHGWIAQLLN
                     ALNTASEATENVAQAYALEMNQTSVVAESAKIPAASERADFLFNCWVETLCTAEVRVL
                     GWLYREFYNRPFHPDSF"
     gene            1115..2539
                     /locus_tag="VIT19_02125"
     CDS             1115..2539
                     /locus_tag="VIT19_02125"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009252629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HEY5837802.1"
                     /translation="MSAPNIETIVSLAKRRGFVYPSSEIYGGLGSAWDYGPLGIELAN
                     NVRQAWWRWMVYERDDIEGLDSSIILNRLAWKYSGHEDTFSDPLVDCKECHSRWRADK
                     LEGGKCPNCGSTNLTEPRPFNLMFRTHVGATSEEDPASLVYLRPETAQGIFINFLNVL
                     NTSRRKLPFGVAQIGKSFRNEVTPGNFIFRTREFEQMEMEYFVKPGEDETAHQEWIDA
                     CNQWFQDIGISGANLRMYEQPKEELAHYAKRTVDIQYRFFPEREEDERQWDELMGIAN
                     RTDFDLKTHSKKPEDAEGKRLNPDSTEDLSYFDEQTKQRFYPYVIEPAAGVNRTVLAL
                     LMDAYSEKTNDKGETRVILKLHHSMAPIKVAVLPLAKNKPEIVGMAKAIKRSLQPVLR
                     AVYDDTGGIGKLYARQDEIGTPFCVTVDHQSLEDEAVTVRDRDTWEQERVKVADLPTY
                     LLQRFAPTPAELGQKPDREGGRPR"
     gene            2633..3001
                     /locus_tag="VIT19_02130"
     CDS             2633..3001
                     /locus_tag="VIT19_02130"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY5837803.1"
                     /translation="MSTRKEIAIAFLKNAANGKLDDAYSKVASNFRHHNPYFPGDTES
                     LKAGMAQAAAMFPNTTLVVKHVLEDGELVAVHSHVQHAANTLPIAAVHMFRFEGNEIA
                     ELWDVAMEAPQDSPNENGMF"
     gene            complement(3126..>4083)
                     /gene="tyrS"
                     /locus_tag="VIT19_02135"
     CDS             complement(3126..>4083)
                     /gene="tyrS"
                     /locus_tag="VIT19_02135"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEY5837804.1"
                     /translation="FLDFEAKPNPAQIVNNADWLGPITMMEFLRDVGKHFTVNNLLGK
                     EAISRRLESEEGISFTEFTYPLLQAYDYLVLYDRFGCSLQLGGSDQWGNIVAGIDLIR
                     RLRSARTHGLVFPLVTAATGVKFGKTEAGAVWLDAKLTSPYRFYQFWLNTDDRDAVMY
                     LKFFTWLSQEEIEALEQSVKAEPEKREAQRRLAREVTAMLHGETELEKAVRASEVLFG
                     KEISGMGVNEILDIFADVPSTELAKSKLDSDGFTLSDALVVSGLAPSTGEAKRLVQGG
                     GVAVNNVRADDARKSISAADFIDGQVLVLRKGAKHYHLIRIA"
BASE COUNT          964 a         1157 c         1098 g          864 t
ORIGIN      
        1 acgcccatca caaatcgacg gggtgagcgt gttggcgaag cgcgcgcggc cttctctctc
       61 aacgtcgccc gtcacaaatg agcacgccca gcaccacgcc aaacgaaccc gctctcctgc
      121 gcgatgccgg tgggcgcatc gactacgatt cgatcccgga cgtcattcaa tggttcctcg
      181 actatgacga aagagtcgcc atcatcaagc atccgaagat tgaagagctt tttcagtgga
      241 aacagcaaca aagtcgagac gccggtgaag aagtcttcaa tttcagtcgc gccgaggatc
      301 gtctggcgat tggcatcatt caatcgctcg cgcacaacca gaccgaggaa gcgctgcacg
      361 gatggatcgc gcagctattg aacgctctca atacagcatc ggaagcaact gagaacgtcg
      421 cgcaggctta cgctctggaa atgaatcaaa cttccgtggt ggcagagtcg gccaagattc
      481 ctgccgcgtc ggaacgcgcc gactttctct ttaattgctg ggtcgagacg ctgtgcacgg
      541 ccgaggtccg cgtgctcggc tggctctacc gagagtttta caaccgtcct ttccatccgg
      601 atagcttctg acccacaacg cccgagcgat tttagtgcga aaatattggc gtctgtaccg
      661 aacacttaca acgcgatcgc aatactccaa cgtccgctaa acgcagccgc tccttttctt
      721 cagaaaattg aaacgagtga ggtgagcaag gcactggcac aaccgttgct aaagctgaac
      781 tcgactaagc aaggaccgaa gctaatttag ggtcaaggct ctgagacaag ttgagaggcg
      841 ctttggggga ggcgcttcac atcttaaaag tgatggcggc tctttcgggg gaacagggtt
      901 gccaggacag tcgcagagca caaaggcagg gctgctgata aacggcttgc agaggctagg
      961 gggagcctcg caggaattat cagcagccct cagccttttt aggcacggtt aatctgattt
     1021 gtttagaggc gggcgttgcc cgcctttttg ctgcctgata cactcacgct tccgttctac
     1081 tattcacgat tcacaatttt cgattcaccg acccgtgtct gcaccaaaca tcgagacaat
     1141 tgtttctctg gcgaagcgtc gcggcttcgt ttatccatct tcagaaatct atggcggcct
     1201 cggcagcgca tgggactacg ggccgctggg tattgaactg gccaacaatg tgcgccaggc
     1261 ctggtggcgc tggatggttt acgagcgcga tgacatcgaa gggctggatt cttcgatcat
     1321 tctgaatcgg ctggcttgga agtattccgg acacgaagat acgttcagcg atccgctggt
     1381 tgactgtaag gaatgtcata gccgttggcg ggcggacaaa ctcgaaggtg gcaagtgtcc
     1441 caactgcggc tcaaccaatc tcactgaacc gcgacctttc aacctgatgt ttcgcacgca
     1501 cgtcggtgcg acgtcagaag aggatccggc ctctctcgtt tatcttcgtc cggaaactgc
     1561 gcagggcatc ttcatcaact ttcttaacgt gctgaacacc agccggcgca aactgccttt
     1621 cggcgtcgcg caaatcggca aatcgtttcg caacgaagtc acgcctggca actttatctt
     1681 tcgcacacgc gagttcgaac agatggagat ggaatacttc gtcaaaccgg gcgaagacga
     1741 aactgctcat caggaatgga ttgacgcctg caatcaatgg tttcaggaca ttggcatttc
     1801 cggcgcgaac ctgcggatgt atgaacaacc aaaagaggag ttagctcatt acgcaaagcg
     1861 caccgtggac attcagtatc gcttcttccc tgagcgtgaa gaagacgaac gccaatggga
     1921 tgagctgatg ggcatcgcga atcgcaccga tttcgatctg aagacgcatt cgaaaaaacc
     1981 tgaagacgca gaaggcaagc gtttgaatcc tgattcgacg gaagaccttt cgtacttcga
     2041 cgagcagacg aaacagcgtt tctatcctta cgtaattgaa ccggccgccg gcgtcaatcg
     2101 cacggtgctt gccctcttga tggatgccta ttcggaaaag acgaatgaca agggcgagac
     2161 gcgcgtcatt ctgaagctgc atcactcgat ggcgccaatc aaagtggcag tcctgccgct
     2221 cgcgaaaaac aaacccgaga tcgtcggcat ggcaaaagcc atcaaacgct ctctgcaacc
     2281 ggttctgcgc gcggtttacg acgacaccgg cggtatcggc aagctttatg cgcgacagga
     2341 cgagatcggc acgcccttct gcgtcacggt cgatcaccaa tcgctggaag acgaggctgt
     2401 caccgttcgc gatcgcgata cgtgggaaca ggagcgagtt aaggtggctg atctaccgac
     2461 gtacctgctg caaaggttcg cgccgacacc agcggagttg gggcagaagc ccgaccgtga
     2521 gggagggcgt ccgcgttagc ggacgatttg aaaatagccc ggcgctttag cgctgggtta
     2581 gcgaaacaaa gagaaacgga gcccgcgtag cgggcgacac aaagatttca ggatgtcgac
     2641 cagaaaagaa atcgctatcg catttctgaa gaatgccgcc aacggcaaac tggacgacgc
     2701 gtacagcaaa gtcgcctcaa acttccgcca tcacaaccct tattttcccg gcgacactga
     2761 atcgttgaag gcgggcatgg cgcaagcggc ggcaatgttt ccgaacacca cgctggttgt
     2821 gaagcacgtg ctggaggacg gagagttagt cgcagtgcat tcgcacgtgc agcacgccgc
     2881 aaacacactg cccattgccg ccgttcacat gtttcgcttt gaaggtaatg agatcgccga
     2941 gctttgggac gtggcgatgg aagccccgca ggattcgccg aacgagaatg gaatgttctg
     3001 agcgtgtcag aagcccgcgc gtcagcaagg gcaactcttg cgatcaacaa tctgggagtt
     3061 cgtcacgctc aggatggata aacttcttcg cttgccctcc ctaacggtcg ggcttctgac
     3121 actggctacg caatcctaat caagtgatag tgcttcgctc ctttgcgcag caccagcacc
     3181 tgcccatcaa taaagtccgc tgctgagatc gacttgcgcg catcatcggc ccgcacgttg
     3241 ttgaccgcta ccccgccgcc ctgcaccagt cgctttgctt cacctgtcga cggcgcgagt
     3301 cccgagacaa ccaatgcgtc gcttaaggta aaaccgtcac tgtccaactt ggatttcgcg
     3361 agttcggtag aaggcacatc ggcgaagatg tcgagaatct cgtttacccc catcccgctg
     3421 atctcttttc caaacagaac ttctgacgcg cggacggcct tctctaattc agtctcgccg
     3481 tgcagcatcg cagtcacttc ccgcgccaga cgcctctgcg cttcgcgttt ctctggttcg
     3541 gccttcacac tttgttccaa cgcctcgatt tcttcctgcg agagccaggt gaagaacttg
     3601 aggtacatca ccgcgtcgcg atcgtcggtg ttcagccaaa attgatagaa gcgatacggc
     3661 gaagtgagct tcgcatccag ccacacagcg ccggcttcgg tcttcccgaa tttcaccccg
     3721 gtcgccgcgg taacgagcgg aaagaccagc ccgtgtgtgc gcgcgctgcg aagccgccta
     3781 atcagatcga taccggcgac gatgtttccc cactgatcgc ttccgcctaa ttgcaggcta
     3841 cagccaaaac ggtcatagag cacgagatag tcataagcct gcaacagcgg gtaagtaaat
     3901 tccgtgaacg agatcccttc ttcagattcc aaacgccggc taatcgcttc tttgccgagc
     3961 agattgttga ccgtgaaatg ctttccaacg tcgcgcagaa actccatcat cgtgatcggc
     4021 ccgagccaat ccgcgttgtt cacaatttgg gccgggttcg gcttcgcttc aaaatccaga
     4081 aag
//
LOCUS       DATDBY010000109         2133 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_927046, whole genome shotgun sequence.
ACCESSION   DATDBY010000109 DATDBY010000000
VERSION     DATDBY010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_927046"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VIT19_02140"
     CDS             <1..355
                     /locus_tag="VIT19_02140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837805.1"
                     /translation="TTDQATRARLTEELNNLGKQMPEPKSELGKKLREIQKYSQAEYA
                     DNDVMLYSALMPVMKSLREQIVASIEKKQNRIRELQRERASLVSRSSYATYGAIAFQL
                     LGLMFILAKDLRESG"
     gene            complement(412..1809)
                     /locus_tag="VIT19_02145"
     CDS             complement(412..1809)
                     /locus_tag="VIT19_02145"
                     /inference="COORDINATES: protein motif:HMM:NF013998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEY5837806.1"
                     /translation="MNSESNSTRGPGTEIRNPKSEIRNLLSRWRNPILGTLLVLAGLA
                     TALFTILARRIGDPGLAGTGAIASLIFALLITILIVPPLARNAYAEVGRRGLPLEVTS
                     GGVIFIVILLIVALAAWNTGNNLLFLVFSIMLSTLFVSWAAARLALRELTAAARFPDH
                     IFAGEPAEVLVTVKNEKRMLPSFSVLVEARGPSGKSKPQRWKHRVRYLKRTLGYFTYV
                     PHRASAEQTVEQLFPKRGHILVTGFELSTRFPFGFFRHRRRLKTREVDIVVYPKPQPI
                     PDELHLLPLFTGQRTSFRRGFGHDLLLLRDYQAHDELRHIDWKATARGRRLIVREFAA
                     EDERRITIMLDTRLTEDIDRENFRIRFENGVVQAASLVNHFIDERAEVSLVLGAERGP
                     FGTGPEQLHACLRRLAMARYEEKVPIDVWPNAITEGIELRGHRPDGNYSILLTAAPQG
                     SIPAHIWRRAFVIFL"
     gene            complement(1848..>2133)
                     /locus_tag="VIT19_02150"
     CDS             complement(1848..>2133)
                     /locus_tag="VIT19_02150"
                     /inference="COORDINATES: protein motif:HMM:NF036831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837807.1"
                     /translation="IVDYLMRIVAATRTSEMLDLGVSPRGTLSLFRAAQALALTEERN
                     YCIPDDVKRLVIPVFAHRITVSSRYASAMRRSEEAEAVLHEILKTVSVPL"
BASE COUNT          502 a          598 c          630 g          403 t
ORIGIN      
        1 aactactgat caggcgactc gcgcgcgtct gaccgaggaa ttgaacaacc tgggtaaaca
       61 aatgccggag cccaagtctg agcttggcaa aaagttgcgt gagatccaga aatattcaca
      121 ggccgagtat gccgacaatg atgtcatgct ttactcagcg ctgatgccgg taatgaaatc
      181 gttacgggaa caaatcgtgg cgagcatcga gaaaaagcag aatcgaattc gtgaattgca
      241 gcgtgaaaga gcatcgctcg taagcagatc gagctacgcc acttatgggg ccatcgcctt
      301 ccaactgctc ggcttgatgt tcattcttgc taaggacttg cgagagagcg ggtaattgtg
      361 acggcccgca gtgggatagt atgaaatcat gttggcgccc gccgaaaacg atcaaaggaa
      421 aatgacaaaa gcgcgccgcc agatgtgcgc gggaattgat ccttgcggtg cggcagtcag
      481 cagaatcgag tagtttccat ccggccggtg cccgcgcaac tcgatgcctt cggtaatcgc
      541 gttcggccag acatcaatgg ggaccttctc ttcatatcgc gccatcgcca atcttctcag
      601 acacgcgtgc aactgttccg gccccgtgcc aaacggccca cgttcggcgc cgagcacgag
      661 cgaaacttct gcgcgctcgt cgatgaagtg atttaccaaa gacgcagcct gcaccacgcc
      721 attctcgaat cgaattcgga agttctctcg atcgatgtct tccgtcagcc gcgtgtccag
      781 catgatcgtg atgcgccgct catcttcggc cgcgaactcg cgcacgatca gccgccgtcc
      841 gcgcgccgtg gctttccaat cgatgtgccg caattcgtcg tgcgcctgat aatcacgcag
      901 gagaagcaaa tcgtggccaa agccgcggcg aaacgacgtc cgctggcccg tgaaaagcgg
      961 cagcaggtgc agctcgtcag gaatcggctg cggctttgga tagacgacga tgtcgacttc
     1021 gcgggtcttc aagcgacggc ggtgacggaa gaacccgaac ggaaaccgtg tcgaaagctc
     1081 gaaaccggtg acgagaatgt gaccgcgctt tgggaagagc tgctcgactg tttgctcggc
     1141 cgacgcgcga tggggcacat aggtgaaata gccgagcgtg cgtttcaaat accggacccg
     1201 gtgcttccat ctctggggtt ttgacttgcc ggatggaccc cgagcttcga ccaggaccga
     1261 gaacgaaggc aacatccgct tttcattctt gactgtgacc agaacttcgg ccggctcacc
     1321 ggcgaagatg tgatcgggaa agcgcgccgc cgccgtcagc tcgcgcagcg ccagacgggc
     1381 cgccgcccac gacacaaaca gagtggaaag catgatcgaa aacaccagga acaacagatt
     1441 gtttcccgtg ttccacgcgg ccagcgcgac gatcaaaagg atgacgatga aaatgactcc
     1501 accgctcgtg acctccagcg gcaaaccgcg ccgccccact tcagcgtacg cattgcgcgc
     1561 gagcggcggc acgatcagaa tcgtgatcag gagggcgaag atgagtgaag cgattgcacc
     1621 tgtgccggct agacccgggt cgcctatgcg gcgggcgagg atggtgaaga gcgccgtggc
     1681 gagaccggca agcaccaaaa gggtcccgag aatcgggtta cgccaacgcg agagaagatt
     1741 tcggatttcg gatttcggat tgcgaatttc tgttccggga ccccgagttg aattgctttc
     1801 actattcacg ttgacaagtg gttgtcgaaa attcgcaatt cgaaatatca gagcggcaca
     1861 ctgacagttt tcaggatctc gtgaagcacg gcttcggctt cttcgctgcg gcgcatcgcg
     1921 gaggcataac gcgagctgac cgtgatgcgg tgggcaaaca cgggaatgac gagtcgcttc
     1981 acatcgtcgg gaatgcagta attgcgttct tcagtcagcg cgagcgcctg cgccgcgcgg
     2041 aacaaagaga gcgtgccgcg cggactaacg ccgaggtcga gcatctcaga ggtccgcgtc
     2101 gccgctacga tccgcattaa gtaatccaca atc
//
LOCUS       DATDBY010000110         5819 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2160674, whole genome shotgun sequence.
ACCESSION   DATDBY010000110 DATDBY010000000
VERSION     DATDBY010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5819
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2160674"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1135
                     /gene="dnaB"
                     /locus_tag="VIT19_02155"
     CDS             <1..1135
                     /gene="dnaB"
                     /locus_tag="VIT19_02155"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEY5837808.1"
                     /translation="FGLPHVPSLAAYAKVVRGKSLLRQLVRVANKITAEALEEEDEPQ
                     NILDHAEHSIFALADERIRQGFEHIKHPAERVLEKAESVEHRDLVVTGVATGFRGLDT
                     LTSGLQKQDLVVIAARPSMGKTSLALALAQHAAIESNAVVGIFSLEMSAEALAMRMLC
                     SEANVDAQKFRSGFLSNEEWARLGKALGKLADARIFIDDTAAISVLEMRAKARRLATE
                     QKQLDLIMVDYLQLMSGSTRRSESRQQEVSQISRELKALAKELNVPLIALSQLSRAPE
                     NRTDHRPQLADLRESGAIEQDADLVAFIYREELYNRSDDNKNIAELIVAKQRNGPTDT
                     VYLAFLNQFAKFTDLEREALGQYLSRFDRSKGSPRIGRGGGEF"
     gene            1266..2417
                     /gene="alr"
                     /locus_tag="VIT19_02160"
     CDS             1266..2417
                     /gene="alr"
                     /locus_tag="VIT19_02160"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEY5837809.1"
                     /translation="MDTSGRPTWAEIDLDALAHNFRVIRERVGPGVKTLAAVKANAYG
                     HGAVECATRLEREGVDWFGVALPEEGIELRTGGISKPILCLGGIWAGQENACIQQHLT
                     PVIYRLDVVGALDRAAKDAGTTVDVHLKIDTGMGRLGVRADDVPDFCAALKRFANIRV
                     DGLMTHLASADDKEQTGFTALQLQRFEQAVAAFRDHGFEPTYIHAANSAGLFAFAESR
                     ANLVRPGGALYGFTRDVLPANLDTPPLRPVMSLYSRIMLLKRVPKGEKLGYGGTFETK
                     RDSLIGTIPIGYDDGYRRAFSNQARVIVRGQFAPVVGRVSMDLTIIDVTEVADVSVDD
                     RVTLLGNDGDCSITAEDLGELAGTISYEITCGISSRVPRIFSSAELRIT"
     gene            complement(2490..5387)
                     /locus_tag="VIT19_02165"
     CDS             complement(2490..5387)
                     /locus_tag="VIT19_02165"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEY5837810.1"
                     /translation="MTSRPALAFLLLLAVSLLCSAALAQPQDCAPPAILPSAAEPNIF
                     TQEQEVFLGDAVAEHIQRNYRVIEDPAVTDYVTRIGQRLVKNLPLNSLKFQFFLVDLP
                     DANAFVIPGGRVYLSRKLVAAAQTEDELASVMAHELGHLVARHSAIDVTRKFKEVLGV
                     TQVGDRHDIFEKYNQLIENLGRKPDAFKVRDREKGQIVADQAGLFALVTAGYEAAAMA
                     RFWDRITETKGKKGNWVSDLFGTTRPEEKRLREMLKVTETIPAACRQRLVAGQPEQFK
                     QWQSQVISYSGLGRKEVLHGVITKQQLNPPLQSEILHLRFSPDGRYLLAQDDAGINVL
                     SREPFEPLFRIETTDDTYYAKFTPDSQEIVFHTDNLRVERWNITEQKQLDAKELVIRK
                     GCLQTELSPDGRLLSCLSPEFELMLINTSNEQVVWRKKEFYAPDYWTYVWILQTLYGR
                     GDDDGDLNISLINTKFSPDGKYFAAGYHGRLSLGRTVTGDVAEAVDTGAFTKVPIPDA
                     VKRLIAGGFVFLSDDRLAGVNRENVKKSAVVRFPAGEVLTELELWRPRMTAPTRGDYL
                     LIRPIKDYALGVMDIKSRTITKVNQRAALDILYPWFVAEMRNGELGMYTFDKNEVVAT
                     SVLPSVTLGRLRVGEVSRDMRWLALSTRSRGGVWELSKGQAALALRGFRGAYLDDAGF
                     FFAEFPKYLEAERNVAKFNLSTGEVVPGPKIENQTAHQFGKYLFTIKSAKASEKKTGD
                     PEPSEENAIANIDYRKNVIIEFLDVSTMQSLWTKAYPKEAPRVWIAPIHGTAALVWNV
                     KTDAARAEIKTDATLTRRQSSMKEQEGDYFVNILDAANGNSLGKLLIETGKGSFRLAH
                     VFAAGDWVVVSDTQNRVLIYSLKSGDLKGRVFGGYATIALATNLLCVENEIGKLAIYD
                     LNTMTKRDELVFSSGISLLRFSADGTRLFVLTTNQNVYVLDVTKALSAKTD"
     gene            5490..>5819
                     /locus_tag="VIT19_02170"
     CDS             5490..>5819
                     /locus_tag="VIT19_02170"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HEY5837811.1"
                     /translation="MSSRFTISIEEQGVTALLYSAAKQKRAGVTLILGHGAGANQLSG
                     FMRLFANGLAERGVDVVTFNFLYTEQGRKIPDPAPRLEGCYRAVIDAALKHKKLKGNR
                     LAIGGKSM"
BASE COUNT         1251 a         1602 c         1641 g         1325 t
ORIGIN      
        1 gtttggtctt cctcacgtac ccagccttgc tgcttatgcg aaagtcgtcc gcggaaaatc
       61 gcttttgcga cagcttgtaa gggtcgcgaa caaaattacg gctgaggcgc tggaagaaga
      121 ggacgagccg cagaacatcc tggatcatgc agagcattcc atcttcgcgc tggctgatga
      181 acgtattcgc cagggttttg agcacatcaa acatccggcc gagcgcgtgc tggaaaaggc
      241 cgagtccgtt gagcatcgcg atctggttgt gaccggcgtc gcaaccggat tccgcgggct
      301 tgatacgttg acttcgggcc tgcaaaagca ggatctcgtg gtgatcgccg cgcgaccgtc
      361 gatgggtaaa acgagcctcg ccctcgcgct cgcgcagcac gcggctatcg aaagcaacgc
      421 cgtcgtcggc atattcagtt tggaaatgtc ggccgaagct ttggcgatgc gcatgttgtg
      481 ctctgaagcc aacgtcgatg cacagaagtt tcgcagcggc tttctttcga atgaagagtg
      541 ggcgcgactg ggcaaggcgc tcggcaagtt ggcggacgcg cgcatcttca tcgatgacac
      601 cgcggccata tcagtgctcg agatgcgcgc gaaagcgcgg cgtctggcaa ccgagcaaaa
      661 gcagctcgac ctgatcatgg tcgactacct tcagttgatg tcgggttcga cgcggcggag
      721 tgaatcgcgg cagcaggagg tttcgcaaat ctcgcgcgag ctgaaggcgt tggcgaagga
      781 actcaatgtg ccgctgattg cgctgtccca gctttcgcgc gcgcctgaga accgcaccga
      841 tcatcgtccg caactcgccg accttcgcga gtcgggcgcc atcgaacagg atgccgacct
      901 cgtcgccttc atctaccgcg aagagcttta taaccgcagc gacgacaaca agaacatcgc
      961 cgagttaatc gttgccaagc agcgcaacgg ccccacggac acagtctatc tcgccttcct
     1021 caatcaattc gccaaattca ctgaccttga acgtgaagcg ctcggccaat atctcagccg
     1081 cttcgatcgt tcgaaaggct cgccgcgaat cggtcgtggt ggcggcgagt tctgacggcc
     1141 caaacattgg cagaaacccg accgtaaggg agggggcttt tctatacacg tggatgcacc
     1201 ctcccttacg gtcgggtttc tgcacttcgc atttatgttt tgaatcagtg taatctgcgt
     1261 aatctgtgga tacttccggt cgtccaacct gggccgagat tgatctcgat gcgcttgcgc
     1321 acaactttcg tgtgattcgt gagcgtgtcg gtcccggcgt caagactctt gccgcggtca
     1381 aagccaacgc gtacggtcac ggagcagttg aatgcgcaac gcgcctggaa cgggaaggtg
     1441 tggattggtt tggcgtcgct ctgccggagg agggaatcga gcttcgcacg ggcggtatct
     1501 caaagccgat cctgtgcctg gggggcattt gggccggtca ggaaaacgcg tgcattcagc
     1561 agcatctcac gccggttatt taccggctcg acgtggtcgg agcactggat cgggccgcga
     1621 aggatgcggg aaccactgtc gatgttcacc tgaaaatcga caccggaatg ggccggcttg
     1681 gcgtgcgagc cgatgatgtt ccggatttct gtgccgcgct gaaacgattc gcaaacatca
     1741 gggttgacgg gctcatgact catttggctt cggcggatga taaagagcag acaggcttca
     1801 ccgccttgca gcttcaacga ttcgagcaag cagttgcggc gtttcgcgat cacggcttcg
     1861 aaccaactta cattcatgcg gccaactcag cgggtttgtt cgcattcgct gaatcgcgag
     1921 ccaacctggt tcgtcccggc ggcgcgctct acggattcac acgggacgtg ctgccagcga
     1981 atttagacac tcctcctttg cgaccggtga tgtccctgta ttcgcgcatc atgcttttga
     2041 agcgtgtgcc gaaaggcgag aagctcggct acggcggcac atttgaaact aagcgagatt
     2101 cgctaattgg gacgattccg attggctacg acgatggtta ccggcgcgcg tttagcaatc
     2161 aagcgcgcgt gatcgtgcgc ggccagtttg cgccggttgt tggtcgcgtc tcgatggact
     2221 tgacgatcat cgacgtgacg gaggtggcgg atgtatcggt ggacgatcga gtgacgttgc
     2281 tgggcaacga cggtgactgc tcaatcacgg ctgaagacct cggcgagctt gccgggacga
     2341 tatcgtatga aatcacatgc ggcattagct ccagggtgcc gcggatattc agttcagcgg
     2401 agttgcgaat tacctgaaac cgccgccgcg gtgcaaatga tcgtggagca tcccttgcga
     2461 caatcgggtt tgtgaggatc tgccgcgctc tagtctgtct ttgcgctcag cgcttttgtc
     2521 acatcaagaa cgtatacatt ctggttcgtg gtcaacacga acaatcgagt tccatccgcg
     2581 ctgaaccgca gcagtgagat cccgcttgag aacaccagct cgtcgcgctt tgtcattgta
     2641 ttgagatcgt aaattgccaa tttgccgatt tcgttttcaa cgcagagcaa gttagtagcg
     2701 agagcgatcg tggcgtagcc gccgaaaacc ctccctttca gatcgcccga tttcaacgag
     2761 taaatcaaaa ctcggttttg tgtatcactg acgaccaccc agtctcccgc ggcaaacaca
     2821 tgcgcaagtc gaaaggatcc tttaccggtt tcaatcaata atttgcccag gctgttgccg
     2881 ttcgcggcgt ccagtatgtt gacgaagtag tcgccttcct gctctttcat cgaggactgg
     2941 cgtcgagtta gcgtcgcgtc tgtcttgatt tcagcgcgcg ccgcatctgt tttcacattc
     3001 cagaccagcg cggccgtccc gtgaatcggg gcaatccaaa cccgcggcgc ttctttgggg
     3061 taagctttcg tccaaagcga ttgcatcgtg gacacatcca ggaattcgat gattacgttc
     3121 tttcgataat caatgttggc gatagcgttc tcttccgaag gttcgggatc accggttttc
     3181 ttttcgctcg ctttggctga cttaatcgtg aataggtatt tgccgaattg atgcgccgtt
     3241 tgattctcga ttttcgggcc ggggacaact tcgcccgtgc tgaggttaaa cttcgccacg
     3301 tttcgctcgg cttccaggta cttgggaaac tccgcaaaga agaacccagc gtcgtcgagg
     3361 taggcgccgc gaaagccgcg aagcgccagg gctgcctgtc ctttgctcaa ttcccatacg
     3421 ccgccccgcg atcgcgtgga cagcgccagc caacgcatgt cgcgcgaaac ttctccgaca
     3481 cgaagacggc cgagtgtgac acttggtaag acgctggtgg cgaccacctc gttcttatcg
     3541 aatgtgtaca tgccgagctc gccgttgcgc atttcagcca caaaccacgg gtagagaatg
     3601 tcgagggcgg cccgctggtt tactttggta atcgtccggg acttgatatc catcactccc
     3661 aatgcgtagt ccttaatggg ccgaatcagc aagtaatcgc cgcgcgtcgg agcagtcatg
     3721 cggggtcgcc acagttcaag ttctgttaac acttcgcctg cgggaaaccg gacaaccgcc
     3781 gactttttaa cattttcgcg attcacgccc gccagccgat catcggaaag gaaaacgaaa
     3841 ccgccggcaa tcagtctctt caccgcgtcg ggaattggga ctttggtaaa cgcgccggtg
     3901 tcaactgctt cggcaacgtc tcctgtgacg gtgcgaccca aagagagacg accgtgatag
     3961 cccgccgcaa agtattttcc atcgggggaa aactttgtat taatgagaga gatgttcaag
     4021 tcgccatcgt cgtcgccccg gccgtacagc gtctggagga tccagacata cgtccaataa
     4081 tccggtgcat aaaactcctt cttgcgccaa acgacctgct cgttcgatgt gttgatcaac
     4141 ataagctcga actctggact caagcacgaa agcaaacgcc cgtcaggcga caattccgtc
     4201 tgcaaacagc ctttccgaat tacgagttct ttggcatcta gttgcttctg ctccgtgatg
     4261 ttccaacgct cgacgcgaag attgtccgtg tggaagacaa tctcctgcga gtcaggcgta
     4321 aacttcgcgt agtacgtgtc gtcagtggtt tcgatccgaa ataacggctc gaagggttca
     4381 cgtgaaagca cgttgattcc ggcgtcatcc tgcgctaaca agtagcggcc gtcggggcta
     4441 aaacgcaggt gaagaatttc gctttgcaac ggcggattca gttgttgttt cgttattaca
     4501 ccgtgcagca cttcttttct tcccaaaccg ctgtaactga ttacctgcga ctgccattgc
     4561 ttgaactgtt ccggctggcc cgccaccagg cgttgccggc aagctgcggg gatcgtttct
     4621 gtgactttca gcatctcacg cagacgcttt tcttcaggac gcgttgtacc gaaaaggtct
     4681 gagacccaat ttcctttctt accctttgtc tcggtgatgc gatcccagaa gcgagccatg
     4741 gccgcggctt catatccggc ggtcaccagc gcaaataagc cggcctgatc agcgacgatt
     4801 tgacccttct cccgatcacg gactttgaac gcgtcaggct tgcgcccgag gttttcaatc
     4861 agttgattgt atttttcaaa gatgtcgtgg cgatcaccga cctgcgtgac gccgagaact
     4921 tccttgaact tgcgcgtaac atcaatcgcc gaatgacggg ccactaagtg cccgagctca
     4981 tgcgccatca cgctcgcaag ttcgtcttcg gtttgcgcgg cggccaccaa tttcctcgag
     5041 aggtaaactc ttccgcccgg aatgacgaac gcattggcgt ccggaagatc gacgagaaaa
     5101 aactgaaact tgagcgagtt caggggcagg ttcttgacca gtcgctgtcc gattcgcgtg
     5161 acataatcag taacggccgg atcctcgatg acgcgatagt tgcgctgaat atgctcagcc
     5221 acagcgtcgc ccagaaatac ttcctgttcc tgagtgaaga tgttcggttc tgccgccgaa
     5281 ggcaaaatgg ctggtggagc acaatcttgc ggttgagcaa gtgccgctga gcaaagtaag
     5341 ctgacagcca gtagaagaag gaacgcaagc gcaggtcgtg atgtcatgag agttcctgtc
     5401 aaaaggggtt ccggtaaaac gacaaaatat cattctctgt ttagccggaa aaggctgaac
     5461 ctgaacatct accgggagga cgtttgggaa tgtccagcag gtttaccatc agcattgagg
     5521 aacagggcgt cacggcgctc ttgtattccg ccgctaaaca gaagcgggcc ggcgtaacgc
     5581 tcattctcgg tcacggcgcg ggcgcgaacc agttgagcgg ttttatgcgt ctgttcgcca
     5641 acggtttagc ggagcgcgga gtagacgtcg tgacctttaa cttcctttac actgaacagg
     5701 gccgcaagat tcctgatccc gcgccgcgac tggaaggctg ttatcgcgcg gtgatcgacg
     5761 ccgcgctcaa gcacaaaaag ttgaaaggca atcggctggc gataggtggc aaatcgatg
//
LOCUS       DATDBY010000111         6167 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1329610, whole genome shotgun sequence.
ACCESSION   DATDBY010000111 DATDBY010000000
VERSION     DATDBY010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6167
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1329610"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..1135
                     /locus_tag="VIT19_02175"
     CDS             266..1135
                     /locus_tag="VIT19_02175"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY5837812.1"
                     /translation="MKEISRLLIACNGSECSDAMLQDLRRAGLPATAEAVVATIAYVF
                     VPPDSEVNETISGPAAAMVRPSQLRATKAVESALALAEQAAARIRDDFPGWSVRSEAD
                     GGTPAWELVQMANRLDVDLIVIGSHDHSTAGGRLILGSVSQRVLYDAPCPVRVARRVE
                     RRSDGPIRIVIGFNGSADAEPALNAVTLRSWPPGTEARSISVGQAPSRSIGVAEERLR
                     AAGLIASVVSHAGDPATVLVQEAESWGADSIFVGTRNVHGFQHLLHGSVSAAVAGRAH
                     CSVEVVRAKKGDG"
     gene            1144..3852
                     /locus_tag="VIT19_02180"
     CDS             1144..3852
                     /locus_tag="VIT19_02180"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HEY5837813.1"
                     /translation="MSLDTKSTNKDINSSVPWHTLTVEAALERLEATRDGLSSEEVAR
                     RLEQFGPNELQASGRVSPWAILLEQFKNVLIIILLVATALSAFLGHGVEAIAITVIVL
                     FAVILGFLQEYRAERAIEALRELAAPHASVIRDGRERDVSARDLVPGDVIILATGDKV
                     PADVRLIEAINLQTNEAALTGESASVEKQTRPLEDEKLQTGDRKSMAYAGTMVTYGRG
                     RAIVTATAMNTEFGKIARMLETVETGKTPLQVNLDRVGKVLARAAFALVIIIVAFGLL
                     RGQPFIEMLIFGVALAVAVVPEALPAVVTISLALGVKRMIKRNALVRRLSAVETLGST
                     SIICSDKTGTLTKDEMTMRKCYVGTQMFEVSGTGYEPKGSFSLNGETVEPGESLTLLL
                     RAAALASDARLERTEQDKWEVKGDPTEGALVVAAAKAGLDKAELERAFPREHEIPFSS
                     ETKRMTTLHSSSNGPIAYSKGAPEFILDSSVRQLTGAGEIELSKANRAEIIHTAQEMA
                     SEALRVLAIAYKPGAGIEDAEREMTFLGLVGMIDPPRAEARAAVKECKEAGIKVVMIT
                     GDHPLTASAVASELGILNSGRLMIGAELDCIDEDKFRAEVETIEVYARVSPAHKLRVL
                     TALKEMGHIAAMTGDGINDAPALKKADIGIAMGITGTDVTKEAAAMTLTDDNFASIVA
                     AVEEGRGIFSNIKKYLMYLLSSNIGEIGLMAGATVAGLPLPLSAVQLLYVNLATDGLP
                     ALALAVDPPEGDLMKRPPRDPRTGIFTRPVVILMLVGGIWSTVINLGLFMWALNSGRS
                     VQEAMTMTFVSLVLIQFFKAYNFRSDRHSVLRRPFANKWLNIAILWELFMLGLILYVP
                     FLETVFGTMALPLRDWLIIVAAALTISPVLELAKWMERRGWFGQLE"
     gene            4218..4739
                     /locus_tag="VIT19_02185"
     CDS             4218..4739
                     /locus_tag="VIT19_02185"
                     /inference="COORDINATES: protein motif:HMM:NF024726.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837814.1"
                     /translation="MKKLLTLALGLVALTVFTGAVLAGATPWLDRDNPSGVGDYETTS
                     DLLKVSCRFKATGQPVTQGNPVGYHCNIKEGGWCKNNNPAGLGCKDLEVMFSWAGGAT
                     PWLDRDNPSGVGDYETIKDLLQVSCRFKATGQPVTQGNPVGYHCNIPEGGWCKNNNPA
                     GLSCKDMEVMFSW"
     gene            4932..5417
                     /locus_tag="VIT19_02190"
     CDS             4932..5417
                     /locus_tag="VIT19_02190"
                     /inference="COORDINATES: protein motif:HMM:NF025170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYCXC family (seleno)protein"
                     /protein_id="HEY5837815.1"
                     /translation="MKRKIVWVTIGVVVVALAAFALTRLQTGPARTENAMHSAEHSSS
                     PLSVEANTAVPAHYETEPAASTLAPTLAPEKFTGKAQEAYRVVREKPQLIAQLPCYCY
                     CDRGFGHKSLHSCFVDDHAAHCAVCVDEALLAYNLQKRGLSAEQIREQIIEQYEPKST
                     P"
     gene            5458..>6167
                     /locus_tag="VIT19_02195"
     CDS             5458..>6167
                     /locus_tag="VIT19_02195"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HEY5837816.1"
                     /translation="MNLCRAIAASLIVAAVALSGCRRSGSNQEIANNGAANSPVAIRM
                     SESPAGADSREPDLSATSDGRMILSWIQKVGEKRYALRMAERDAKGWSEVRTVAEGEN
                     WFINWADFPSVIALKDGSLAAHWLVKSAASTYAYNVNIARSKDHGKTWDKPVVPHRDM
                     TQTEHGFVSLIPLADGRVGAVWLDGRNLKDVKDEDEHSALKESMTLRYAAIDAEGKLS
                     DEAQLDDRVCECCQTSAAL"
BASE COUNT         1364 a         1691 c         1887 g         1225 t
ORIGIN      
        1 gcaatcgaaa ggggagtagg tcacctgccc ttaatggtcc gatgaagccg tcaacacgga
       61 gcccaacgta gggcacccgg cgcatcgggt agagcaagca gctcaacgac ccagaccttt
      121 tgcggcttta ctgcgcgcag aaggtttttt cttttggcgc aacggagttt ccagggctta
      181 cgcgcgaaag gatgagagat ggtcgagctt ccttacattc caaataccgg agccgagtct
      241 cttacccgcc gccaggaggt aagagatgaa agagatttcc aggctgctaa tcgcatgtaa
      301 cgggtctgaa tgctcagacg cgatgttgca ggatctgcgg cgggccggct tgccagcaac
      361 tgcggaagca gtcgtcgcta caatcgcata tgtcttcgtt ccacccgata gtgaggtcaa
      421 cgagacaatt tctggccccg ccgccgcgat ggttcggcct tcccagttgc gcgcgacaaa
      481 agctgtcgag agcgcattgg cgctggctga gcaggccgca gctcgtatca gagatgattt
      541 tcccggatgg tccgtcaggt ctgaagccga cggtggcacg ccggcgtggg aactggttca
      601 gatggccaac cgccttgacg tcgatctaat cgtgatcggc tcgcacgacc actcaaccgc
      661 cggcggaaga ctaatcctcg gcagcgtttc gcagagagtg ctttacgatg cgccgtgccc
      721 ggtgcgcgtg gcgcggcggg ttgagcggcg cagcgacggg ccaattcgaa tcgtaatcgg
      781 gttcaatggc tcagccgacg cggagccggc actaaacgcc gtcactttac gttcatggcc
      841 gccggggact gaggcgcggt ccattagcgt cgggcaggcg cccagtagga gcatcggagt
      901 tgccgaagaa aggttacgcg ccgccggtct tatcgcgagt gtagtaagcc atgccggaga
      961 cccggccacg gtccttgtgc aagaggcgga aagctggggg gccgactcga ttttcgtcgg
     1021 cacccggaac gttcacggtt ttcagcacct cctgcacggc agtgtctctg ccgccgtggc
     1081 ggggcgtgcg cattgctcag ttgaagtggt acgggcgaag aagggggatg ggtaaatctt
     1141 cttatgtcac tcgacaccaa atccacaaac aaagatatca actcgagcgt gccgtggcat
     1201 acgctcacgg tcgaagcggc tctggaacga ctggaggcaa ctcgcgatgg ccttagctct
     1261 gaagaggtgg cgcgccggct ggagcagttt gggccgaacg agcttcaggc gtccggccgg
     1321 gtatcgccat gggccatcct gctcgaacaa ttcaagaacg tactaataat catcctgctt
     1381 gtcgccactg cgctgtcggc ttttcttgga cacggtgtcg aggcaattgc gattaccgtg
     1441 atcgttttat tcgcggtcat tctgggtttt ctccaggagt accgagccga acgtgccatt
     1501 gaagcactgc gcgaattggc ggcgccgcat gcaagcgtga tccgtgacgg tcgagagaga
     1561 gacgtctcgg cccgcgatct cgtccctggt gacgtcatta tcctggcgac cggcgacaaa
     1621 gtgccggccg acgtaaggct gatagaggcc atcaatcttc agacgaatga ggctgccctg
     1681 accggcgagt ccgcgtctgt cgaaaagcag actcgcccgc tggaagacga aaaactccag
     1741 acaggtgatc ggaaaagcat ggcttacgcg ggcacgatgg ttacttacgg gcgcgggcgc
     1801 gcgattgtca cggccacggc catgaacacc gagttcggca agatcgcccg catgctggaa
     1861 acagtcgaaa ccggaaagac cccgttgcag gtaaacctcg accgcgtcgg caaggtgctg
     1921 gcgcgcgctg cattcgcgct cgtcatcatc atcgtcgctt tcggattgct tcgcggacag
     1981 cccttcatcg agatgctcat cttcggtgtc gcattggccg tcgccgtggt tccggaggcg
     2041 ttaccggccg tagtgacaat ctcgctggcg cttggcgtga aaaggatgat caagcgtaat
     2101 gcgttggtgc gccgcctgtc tgcggtcgag acgctcggaa gcacgtcgat catttgctca
     2161 gacaagaccg gcacgctgac taaagatgag atgacgatgc gcaagtgcta cgtcggtact
     2221 cagatgttcg aggtctccgg caccggctac gaaccgaagg ggtcgttttc gctaaatgga
     2281 gaaactgttg agccgggtga atcgctgacc ttgctgttgc gcgccgccgc gctcgcgtcg
     2341 gatgcccgtc tcgagcgaac cgagcaagat aaatgggaag ttaaaggtga cccgactgag
     2401 ggcgcactgg tcgtggcggc agcaaaggcc ggcctcgata aggccgaact tgaacgggct
     2461 tttccgcgcg agcatgaaat tcctttcagc tctgagacca aacgcatgac gacgttgcac
     2521 tcgtcgtcaa acggacccat cgcctactcc aaaggcgcgc cggaattcat tctggattca
     2581 tccgtgcggc aattgactgg cgcaggcgag atcgagctct cgaaagcaaa ccgggcggag
     2641 attatccaca ccgcacagga gatggcgagt gaagccctgc gcgtgcttgc catcgcgtat
     2701 aaacccggcg ccgggatcga agacgctgaa cgcgagatga cgttccttgg gctggtggga
     2761 atgattgatc cgccgcgcgc cgaagcccga gccgccgtta aagaatgcaa agaagcggga
     2821 atcaaagtcg taatgatcac gggggatcat ccgctgacgg cgagcgccgt ggcgagcgaa
     2881 ttgggcatcc tcaactcagg ccggctcatg atcggcgccg agctcgactg tatcgacgaa
     2941 gacaagtttc gcgcggaggt cgagacgatc gaggtatacg cgcgagtctc gcccgcacac
     3001 aaactgcgcg tgctcacggc cttgaaagaa atgggtcaca tcgccgcgat gacgggcgac
     3061 ggtatcaacg acgcgccggc gctgaaaaaa gcggacattg gaatcgcgat ggggattacc
     3121 ggcacggacg tgaccaaaga agcggcagcg atgactttga ccgacgacaa tttcgcatca
     3181 attgtcgccg ccgttgaaga ggggcgcggc atcttcagca acatcaaaaa atatctgatg
     3241 tacctgctct catcgaacat tggcgagatt ggcttgatgg ccggggccac ggtggccgga
     3301 ctgccgctgc cactttctgc ggtgcagctt ctctacgtta atctggcgac ggatggactg
     3361 cccgctctgg cgctcgcggt tgatccgccc gagggggatc tcatgaagcg cccgccgcgc
     3421 gatccgcgta ccggcatttt cactcggccg gtggtcatac tgatgctggt cggcggaatc
     3481 tggtcaacgg taatcaacct cggcctcttt atgtgggcct tgaattcagg acgcagcgtt
     3541 caggaagcga tgacgatgac gttcgtctct ctggtgctga tccaattctt caaggcctac
     3601 aatttccgtt ctgaccgcca ttcggtgctg cggcgtccct tcgcgaacaa gtggcttaac
     3661 atcgccatcc tttgggaact gttcatgctt ggactgatcc tgtacgtgcc cttcctggaa
     3721 accgttttcg ggactatggc gctgccgctc agagattggc tcatcatcgt ggccgcagcc
     3781 ttgaccatct cgcccgtgct cgagctggcg aaatggatgg agcggcgcgg ctggtttgga
     3841 caacttgaat aagggaacat cgggatataa caaagttgtt tggcggtcgg cggtgacgtg
     3901 acgttctatt cgaaacctgc gatcctcgac cgcacttacg gcgaatcggt ttcggggaaa
     3961 gtctttttcc ggcttcgccc ggccaggatg gacctgagta agcacggcgg ccgcggcggt
     4021 agatagggtt ccgccccgaa aacgactcat caaggtccgg aaacgcatcg agttaacgga
     4081 aagatgtcta aaaaatagtc ctgggcggcg ttacgttcct tcctggaaag gcacttacag
     4141 atgcaagcgt gaaatcgaac gaagaagacg agattgcagg cttgctagtc tgataggtat
     4201 taagaaagga acttcccatg aagaaattac taactctggc cttagggctc gtagctctaa
     4261 cggtcttcac cggtgccgtg ctggcgggcg cgaccccctg gctcgatcgc gacaacccga
     4321 gcggcgtcgg cgactatgag acaacgagtg accttctgaa ggtctcgtgc cgcttcaagg
     4381 ccaccggaca acccgttaca caaggaaacc ctgtgggcta ccattgcaac atcaaagaag
     4441 gcggctggtg caagaataac aaccctgccg gtcttggatg caaggacctg gaggtcatgt
     4501 ttagttgggc tggcggcgca accccctggc tcgatcgcga taacccgagc ggcgtcggtg
     4561 actacgagac aatcaaggac cttctacagg tctcgtgccg tttcaaggcc accggacaac
     4621 ccgtcacaca aggaaaccct gtgggctacc actgcaatat cccagaaggc gggtggtgca
     4681 agaataacaa cccggcaggt ctcagttgca aggacatgga ggtcatgttt agttggtgac
     4741 cgctggggag caactgtgat ttgatacgcg tatcctccgg tattggttca tcggcatcgg
     4801 gcagactcga tgccgatgac ctgtttgcgg cttcgcccgg caaacatgga aatgagtagg
     4861 cacggcggcc acggcacaca cagcggtcag tgaccgcagc agaaaatgtc gaggattaaa
     4921 agaacatgaa catgaaaaga aaaatcgtct gggtcactat cggtgttgtt gtggtcgcgc
     4981 tcgccgcgtt tgcattaacg cgactacaaa caggcccggc tcgcaccgaa aatgcgatgc
     5041 attctgctga gcattcgtcc tcgccgcttt ccgtagaagc aaacacggca gttcctgccc
     5101 actatgaaac ggaaccggcg gcaagtactc tggcgcccac cctcgcgcct gaaaaattca
     5161 ccggaaaagc acaggaggct tatcgtgtcg tccgagagaa gccgcagttg atcgcgcagt
     5221 tgccttgtta ctgctattgc gatcgcggct ttggccacaa gagtctgcat agttgtttcg
     5281 tagacgatca cgccgcgcac tgtgccgttt gcgtggacga ggccttgctg gcttataacc
     5341 tgcagaagcg gggcttgtcg gccgagcaaa tacgcgaaca aatcattgag cagtacgaac
     5401 cgaagagcac accgtgaggt ggccagcgtg actcagcgga atcatttgat gactgacatg
     5461 aacttgtgcc gcgcgattgc tgcttcgtta attgtggcgg cggttgctct gtccgggtgc
     5521 cgtcgttcgg gatcaaacca ggagatcgca aacaacggcg ccgcgaattc tccggtcgca
     5581 attcgaatga gcgaaagccc ggccggtgct gacagccgag aaccggattt gagcgccacg
     5641 tcagacggcc gaatgattct tagctggatc cagaaagtgg gagagaaacg ttacgcgctg
     5701 cgcatggcgg aacgtgatgc gaagggctgg tcggaagttc gcacggtcgc agaaggcgaa
     5761 aactggttca tcaactgggc cgactttcct tcggtcatcg ctctcaaaga tgggtcgttg
     5821 gcggcgcatt ggttggtgaa gagcgcggcg agcacgtacg cctacaatgt gaatattgcg
     5881 aggtccaaag accatgggaa gacctgggac aaacccgtcg taccgcaccg ggacatgacg
     5941 caaaccgagc atggttttgt atcgctgata cctttggcag acggacgagt cggagccgtc
     6001 tggctcgacg gccgcaatct gaaagacgtc aaagacgagg acgagcacag cgcgttgaaa
     6061 gaaagcatga cactgagata tgccgcgatc gacgctgagg gcaaactctc agatgaagcc
     6121 caactggatg atcgcgtgtg cgaatgctgt caaacctcgg cggccct
//
LOCUS       DATDBY010000112         5927 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2768790, whole genome shotgun sequence.
ACCESSION   DATDBY010000112 DATDBY010000000
VERSION     DATDBY010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5927
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2768790"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VIT19_02200"
     CDS             complement(<1..557)
                     /locus_tag="VIT19_02200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837817.1"
                     /translation="MDLSKIDFRYVKEAFKEPLNFWGMAGFAVASAFFWDVTPLLMGL
                     GSEVVYLTVVPASPFYRRYIERREKQRQHKLREAQREQLIKALDPREREAVEYLRWMK
                     NQIYSNYRKFTNSKEIPSNLETLDQRWEDFVDLLDVYRRRKHHLRSINRKAVQNQLKQ
                     AEHAIQTATDDRQKRIQQANAEILRR"
     gene            complement(691..1428)
                     /locus_tag="VIT19_02205"
     CDS             complement(691..1428)
                     /locus_tag="VIT19_02205"
                     /inference="COORDINATES: protein motif:HMM:NF015945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HEY5837818.1"
                     /translation="MGLWTRLKRSMRALFGGAIERTEDPELILQQTIRDMRDRIPDLN
                     NSVAQVMATEKLLAKNKERLEAQVVDLDSKIKASIKMSRDDIATAYIGQLSQAQIDLQ
                     KTVHQHEHAQLASKQALKARDNYMLQMQRRTAEAMQLINQSKQAKLQEQLAQTMASFQ
                     LGDDAGTFDEMRDKIDRRAAAAEAKMQLGTSSVDTQMQEIEREAMDMQLQDKLLSYKK
                     EMGLLPAGTEAGSPQALPAHGETSRQP"
     gene            complement(1589..2887)
                     /gene="purD"
                     /locus_tag="VIT19_02210"
     CDS             complement(1589..2887)
                     /gene="purD"
                     /locus_tag="VIT19_02210"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEY5837819.1"
                     /translation="MRILVVGSGGREHALVWALKKTSSRPVDVICAPGNAGIAEIAQC
                     IAIGATDVVALADFAQREQIDLTMIGPEASLAEGVVDEFERRGLRIVGPSREAARLET
                     SKVFAKDFMQRHGIPTARYRVAASADEAIKILRSGDFGNENSPVVVKADGLAAGKGVV
                     VARSRDEAEKALADLIALGSAAEHILIEEALTGPEASVLLFSDGRDFRLMPAARDHKR
                     VGVGDTGPNTGGMGSITDASVIDYSTLKKVVREIIDPTLRGALTEGFPFRGILFIGLM
                     LTSEGPRVLEYNVRFGDPETQAILITLQTDLSAIFEAIVDHRLGELHVQWSNDSAVCV
                     VLAARGYPGKPETGTVIQGLDRAAQHENVGVFHAATSRGPNAEWLTAGGRVLGLTATG
                     ETLDAALSRCYAAVDDIHWDGMHYRRDIGRTAAPNAAAGG"
     gene            3127..3489
                     /locus_tag="VIT19_02215"
     CDS             3127..3489
                     /locus_tag="VIT19_02215"
                     /inference="COORDINATES: protein motif:HMM:NF024843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain containing protein"
                     /protein_id="HEY5837820.1"
                     /translation="MSDSEVLATSPVQSSEFHDENLKCVDCGQSFLWTAGEQIFFHDK
                     GLKNPPKRCKVCKQAKNDRLAAVSASHTSGVRQRIEVTVVCAQCGQQTTVPFYPSQGR
                     PVYCRACFLAGKAFSANA"
     gene            complement(3499..5538)
                     /locus_tag="VIT19_02220"
     CDS             complement(3499..5538)
                     /locus_tag="VIT19_02220"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEY5837821.1"
                     /translation="MASFKRWLVGSPIKTARLTHERLTKKIALAIFASDALSSTAYAT
                     EQILLVLAAAYVAGQKGAFGKVIPISIAIGALLVIVATSYRQTIRAYPSGGGAFIVAK
                     ENLGTVPGLVAGASLLIDYCLTVSVSTSAGVEAITSAMVGTRFAWLHDHRVALCLFFI
                     TFIMLANLRGVREAGSFFAAPSYAFVVSFLGLIGYGLISYYISPDVAPIPDDANMKIA
                     EGYEAQALGVFLLLGAFANGCAALTGIEAISNGVQAFKQPESKNAAITLTWMAALLVT
                     MFIGASVLAYLFGVHPQHRETVISQIARAVFTGPVGWFYYVVQATTAGILVLAANTSF
                     SGFPRLASLLAKDRFLPRQLANLGDRLVFSNGIVVLAVFSGTLVWAFGADTSRLIPLY
                     AVGVFLGFTLSQSGMVIHWWREGKQLKTMRAAVATGNVATGKPIEKKRSAEFMLTGKL
                     EASRLTKSGEEPKTLAEVAALEKKSHWRKYLAINGVGALATFLVLTVFLVTKFTHGAW
                     IVVVLIPLLVFMFRRIHRHYIEVAEQLSTEGLSPLRPIHHEVIVPISGIHRGVIEALE
                     YAKSIAPHHVTAVYVNLDDEAARKLREKWTQWGSGVNLVVVASPYRSLARPLLNYVDR
                     VKRTKKGVVTIVLPEFVPAKWWQNLLHNQNTLFLKGALLFKKGIVVTNVPYHLEH"
BASE COUNT         1286 a         1731 c         1623 g         1287 t
ORIGIN      
        1 cgcctgagaa tttccgcgtt ggcttgctgg atgcgtttct gccgatcgtc agtcgcggtt
       61 tggattgcgt gctcagcttg cttcagttgg ttctgaacgg ccttacgatt gattgagcga
      121 aggtgatgct tccggcggcg atagacgtcg agcaagtcaa cgaaatcttc ccagcgttga
      181 tcgagcgttt ccaggttgga aggaatctct ttgctgttgg tgaacttgcg gtagttcgaa
      241 tagatctgat ttttcatcca ccgcaggtac tcgaccgcct cgcgctctcg tggatcgagt
      301 gccttgataa gctgttcccg ctgggcttcg cgcagcttat gctgtcgctg cttctcgcgg
      361 cgttcaatat aacggcggta gaaaggactg gctggaacta ctgtcaaata aaccacttcg
      421 ctgcccagac ccatcaacaa aggcgtgaca tcccagaaaa aggcggacgc gacggcgaac
      481 ccggccatgc cccagaaatt caggggctcc ttgaacgcct ctttcacgta tcggaaatcg
      541 atcttcgaca agtccatcta tcgtacgaga ttcggtgcca ctagttctga aacatgcgcc
      601 gtcgctcacc gccccacccc agccgagatg ctcggccggg gaccccggag gtcgggcttc
      661 tgacagtcag ttggatgctc ggaaaacggt ttacggctga cggctggttt cgccatgggc
      721 gggcaaagcc tgcggcgagc ctgcctcagt tcctgcgggc agcaaaccca tctccttctt
      781 gtaggagagc agcttgtcct gcaactgcat gtccattgcc tcgcgctcga tctcctgcat
      841 ttgagtatcg accgaggatg tgcccaactg catcttggct tcggccgccg ccgcacggcg
      901 atcaatcttg tcccgcatct cgtcgaacgt cccggcatcg tccccaagct ggaaagacgc
      961 catcgtctgt gccagctgct cctgcaactt tgcctgcttg gattgattga tcagctgcat
     1021 cgcttcggcg gtgcgccgtt gcatctgaag catgtaattg tcgcgggctt tcagcgcctg
     1081 cttcgaagcg agctgcgcat gttcatgctg atggacggtc ttctgcaagt cgatctgcgc
     1141 ctgcgaaagc tgtccgatgt aggcggtggc gatgtcatcg cggctcatct tgatcgaggc
     1201 cttgattttc gaatcaagat cgaccacctg cgcttccagg cgctccttgt tctttgcgag
     1261 cagcttttcg gtcgccatga cctgggcaac ggaattattc aggtcgggaa tgcgatcccg
     1321 catgtcgcgg attgtctgct ggagaatgag ttccggatcc tcagtcctct cgatcgcgcc
     1381 gccaaacagc gcgcgcattg aacgctttag tctcgtccac agtcccatgt tttcatcctc
     1441 cagaggttca gatttgccgg tttgacttca caagccacgc aatagcgcct tgggttgtac
     1501 gttataggcg cacaaacggt tgcagtccgg ccaatttttc gcggcgagta taacagagag
     1561 tgccgcagtg ggcagtaagc gttgagagtt aaccgccagc tgccgcgttg ggtgctgccg
     1621 tccgcccaat gtcccggcga tagtgcatcc cgtcccaatg aatatcgtcc acggcagcgt
     1681 agcagcggga caaagccgcg tcgagcgttt cgccggttgc cgtcaaacca aggacgcgac
     1741 cacctgccgt cagccattcg gcatttggac cgcgggaggt ggcggcatga aagaccccca
     1801 cgttctcgtg ttgcgcagcg cgatccaggc cttgaattac cgtccctgtt tccggtttgc
     1861 cgggatagcc ccgcgccgcc aaaacgacgc agacggccga atcattcgac cattgcacgt
     1921 ggagttcgcc aagacggtga tcgacgatcg cctcgaaaat ggccgagaga tcagtttgaa
     1981 gcgttatcaa gatcgcttgc gtctcaggat cgccgaagcg cacgttgtac tccaacaccc
     2041 gggggccttc gctcgtcagc atcaggccga tgaaaagaat tccgcggaaa ggaaaaccct
     2101 cggtaagcgc gccgcgcagc gttgggtcga ttatttcgcg gacgactttt ttcaaagtac
     2161 tgtaatcgat aacgcttgcg tcggtgatcg atcccatgcc accggtgttc ggtccggtgt
     2221 cgcccacacc gacgcgcttg tgatcgcgcg cggccggcat taagcgaaaa tctctgccgt
     2281 cggaaaacag aaggactgac gcttccggac cggtcagagc ctcttcaatg aggatgtgct
     2341 ctgccgccga acccaacgcg ataagatcag ccagcgcctt ttccgcttcg tcgcgagagc
     2401 gggcgaccac gacacctttt ccggcagcca atccgtcggc tttgacgacg acgggtgagt
     2461 tttcattacc gaagtcaccg cttctcagaa tctttatcgc ttcgtctgcc gaagcggcaa
     2521 cgcggtagcg cgcagtggga attccatgac gctgcatgaa gtcctttgcg aacaccttgc
     2581 tggtttccag tcgcgccgct tccctgctgg ggccgacgat ccgaagtccg cgccgctcga
     2641 attcatccac gacgccttcg gcgagagacg cttccggccc aatcatcgtc aagtcgatct
     2701 gctcgcgctg cgcaaaatca gcgagcgcga caacgtccgt cgcgccaatc gcaatgcatt
     2761 gagcaatctc ggcgatccct gcattgccgg gcgcacaaat gacatccacg ggccggctgc
     2821 tcgtcttttt aagtgcccaa accagcgcgt gctcgcgccc gcctgaaccg acaaccagaa
     2881 tcctcattct tctcttctca ctgaacgaat ttagccgatg attttcgccg caaaaacgct
     2941 tgacagcact gcgccttagt tataagttgc acgcgctgtg gccgtcgctt tttgagtgct
     3001 tgccccgtta ttcaaacctg acagcattca atctagtctt cctcggcctc ctcgtcagtt
     3061 cggaagccgt tcgtgcgaat ccgctcctgc cggtcgccgc gtgcatcaat gtgcggagga
     3121 gacagtatgt cagacagcga agtcctcgca accagccccg tccaatcgtc tgagtttcat
     3181 gacgagaacc tcaagtgcgt cgactgtgga cagagctttc tgtggactgc cggcgaacaa
     3241 atattttttc acgataaggg actgaagaac ccgcccaagc gttgcaaggt ttgcaagcag
     3301 gcaaagaacg atcgactggc ggccgtctct gcttcacata cttccggtgt gcgccagcgg
     3361 atcgaagtca ccgtcgtctg cgcgcagtgc ggccaacaaa ccaccgtacc cttctatcct
     3421 tcacaaggac gcccggttta ttgccgcgcg tgtttcctgg caggtaaggc cttcagcgcc
     3481 aacgcttaag acacgagttt agtgttcgag gtgatagggc acgttcgtca ccacaattcc
     3541 cttcttaaaa agcagggcgc ctttcaagaa cagagtgttc tgattgtgca gcaggttctg
     3601 ccaccacttg gcgggaacga attccggaag cacgatggta accacgcctt tcttagtgcg
     3661 cttgacgcga tcgacgtagt tcaaaagcgg tctggcaagc gagcggtacg gcgaagctac
     3721 gaccaccagg ttgacgcctg agccccactg tgtccacttt tcgcgcaact tccgcgctgc
     3781 ctcgtcatcc aggttcacgt aaaccgccgt gacgtggtgc ggcgcgatcg actttgcgta
     3841 ctcaagcgcc tcgatcactc cgcgatgaat tcccgagatg ggcacgatta cttcgtgatg
     3901 tatcggacga agcggactga gaccttcggt tgaaagttgc tctgcgactt caatgtagtg
     3961 acgatgaatt cgccggaaca tgaaaaccag cagcggaatt aatacaacca cgatccaggc
     4021 gccgtgcgtg aacttcgtga caaggaaaac agtgagcacg agaaaagtcg cgagggcgcc
     4081 cacaccgttt atcgcaaggt actttctcca atgcgatttc ttttccagtg cggccacctc
     4141 ggcgagggtt tttggctctt caccggattt ggtcagccgg cttgcttcga gctttccagt
     4201 cagcatgaac tctgccgatc gctttttctc gatcggcttg ccggtggcga cattgccagt
     4261 cgccactgcg gcgcgcattg ttttaagctg ctttccttct cgccaccaat gtatgaccat
     4321 gccggactgt gacaatgtga agccgagaaa cactcccacg gcatacaagg gaatcaatcg
     4381 gctggtgtcc gcgccaaagg cccagacgag cgtgccggaa aagactgcaa gcacgacaat
     4441 gccgttagag aagacgaggc ggtcaccgag attcgcgagt tggcgcggca gaaagcggtc
     4501 tttggcaagc aacgatgcca aacgagggaa cccggagaac gatgtatttg cggccagaac
     4561 caggattccc gcggtggttg cttgcaccac gtaatagaac catccgaccg gcccggtaaa
     4621 aacagcgcgt gcaatttgtg aaatgacggt ttcccggtgc tgcgggtgga cgccgaaaag
     4681 atatgcgagc acgctcgcac cgataaacat agtcacgagt agcgccgcca tccacgtcag
     4741 ggtgatcgcg gcatttttcg actcgggctg tttaaacgcc tggactccgt ttgatatagc
     4801 ctcgataccg gtgagcgcgg cgcaaccatt agcgaatgca ccaagtagca ggaatacccc
     4861 taacgcttgc gcctcatagc cctcagcgat tttcatgttc gcatcatcgg gtataggagc
     4921 gacgtcggga cttatgtagt aactgatcag tccgtatcca atcagaccga ggaaactcac
     4981 gacgaaggca taactgggcg cggcgaaaaa tgatccagcc tcgcgaacgc cacgcaagtt
     5041 tgccagcatg atgaaagtga taaagaacag gcagagcgct acccgatgat catgtaacca
     5101 ggcgaaccga gtgcccacca tcgccgaagt gatcgcttca actcccgcag acgtggaaac
     5161 cgacaccgtc agacaataat cgataagcag cgaagcgccg gcgaccaggc ccggcaccgt
     5221 gccgagattc tctttggcaa ctatgaacgc gccgccacct gacgggtagg cgcgaatcgt
     5281 ctgccggtaa ctcgtcgcaa caatgaccag gagagcgccg atcgcaatgg aaatagggat
     5341 aacttttccg aaagcaccct tttgcccggc aacgtacgcg gccgcgagca cgagaagtat
     5401 ttgttcagtg gcgtaggcgg tagatgagag ggcgtctgac gcaaagatcg cgagcgcgat
     5461 cttcttagta agtctctcgt gtgttaggcg cgctgttttg atcggacttc cgaccaacca
     5521 acgcttaaat gaggccattc gtctctaacc gtagcgaacc ggcaaccgac tgaagagcgc
     5581 aaaaatgcca cagcgtgcaa cttcaaaaag cgccgactgt ggcgattgct cacctgctgg
     5641 tggctcgatg ctccattgtc cttacataaa gcgcccgggg ggctgattat ccgtgcggta
     5701 tgttatgccc tttaaactga aagtcaacca ctgaattgag ttgtcggatt gaagtgatta
     5761 gtcgcgcgca gatttaagag gcgctaaaaa taaaagcggg cggggccctc ccacaagccc
     5821 caccctaagg ccacgtgtcc tcaccccacg cgaccacttc gtccaccggg gaggcggacg
     5881 cgcgatgatt atgcacaact cactctttcg atgcaaccca aagatta
//
LOCUS       DATDBY010000113         2383 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2805725, whole genome shotgun sequence.
ACCESSION   DATDBY010000113 DATDBY010000000
VERSION     DATDBY010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2805725"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1816
                     /locus_tag="VIT19_02225"
     CDS             <1..1816
                     /locus_tag="VIT19_02225"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HEY5837822.1"
                     /translation="PINIASTIRELARAESGRGNLEVALSQSEVALNLIELLRSQAGG
                     PEARATYLASVQDYFELKVDILTRLHKLDPSRGYAATALQTSERARARSLLETLAEAG
                     IDIRRGVNSDLLNHEQAIVNELSAKASEQARLMGMKSDEAALVKVGKDIRDLSVRYER
                     IEHEIRAASPRYADLMLPRPLTLAEIRDQVVDSQTVLLEYYLGQERSYLWAVTSKSIE
                     SYELPKRAVIERAARRVYELLTVRNRRVKFETVEERRARIAKADAEYHDAANALSEIV
                     LKPVAGQLANRRLLIVSDGALQYVPFAALPTPSSNGSPSITPLALNHEVVGLPSASTL
                     AVLRREVASRKPAPKTIAVFADPVFDGNDKRVQDSLAQTRALTPGTAVARSRPGATIS
                     KREIERSASESGWDGEALSLARLPFTRREAEVIKALVPAAYRKADLDFAASLANAKSP
                     ELAQYRIVHFATHGFLNSRHPELSGIVLSLVDEKGTEQNGFLRAHEIHDLKLPAELVV
                     LSGCRTGLGKEIRGEGLVGLTRAFMHAGSARVLVSLWDVNDEATAELMSLFYSRLLGR
                     EKLSPAAALRATQISMARDKRWSSPYFWAAFTIQGEPQ"
     gene            complement(1829..>2383)
                     /locus_tag="VIT19_02230"
     CDS             complement(1829..>2383)
                     /locus_tag="VIT19_02230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837823.1"
                     /translation="KSNEVQLALDHPEKKTTPGATAEASTPLPARREPNESFVARTLL
                     TNDYVNADPGEEGTRGPWNRNSTGKSLAEVHRVHVQVKSTAVSSTDFLAEMGQALATG
                     NNLQSADADQADAALKVTVRAATTRPEDSRIIVIVRAVNANGYDVWPATRRSSSWRYV
                     GRPRAVAERIVSDLAKDIRGRKGR"
BASE COUNT          498 a          680 c          690 g          515 t
ORIGIN      
        1 cccgataaac atagcctcga ccattcgcga gttggcccgc gcggaaagcg gacgcggtaa
       61 cctcgaggtt gcgctgtctc agagtgaggt cgcgctgaac ctgattgagt tgctacggtc
      121 acaggcaggt ggacccgaag ctcgcgctac ttacctggct tccgtccagg attattttga
      181 gctaaaggtc gatatcctga cgcggttgca caagctggat ccatccaggg gctacgccgc
      241 aacggctttg caaaccagcg aaagggcgcg ggcgcgttct cttctggaaa ctctggcaga
      301 ggctggcatc gatattcgcc gtggcgtgaa ttcagatctc ctcaatcacg agcaggcaat
      361 cgtgaatgaa ctcagcgcca aagcctctga acaggcgcgc ctcatgggca tgaaatcgga
      421 tgaagcggcg ctggttaagg tcgggaagga tatcagagac ctcagcgttc gatacgagag
      481 aattgagcac gagatccgtg ccgcgagtcc gcgctacgct gatctgatgc tgcctcgacc
      541 gctgacgctc gctgaaatcc gcgaccaggt ggtggatagt caaaccgtgt tgcttgaata
      601 ctacctgggt caggagcgca gttatttgtg ggcagtcact tcgaaatcca tcgaaagcta
      661 cgaactgccc aagcgcgcag taatcgagag agccgctcgc cgtgtttatg agttgctcac
      721 cgtccgaaat cgccgcgtaa aattcgagac cgttgaagag cgtcgcgctc gtatcgccaa
      781 agccgacgct gagtaccatg atgccgccaa cgctttaagc gaaattgtgc tcaagccggt
      841 ggccggacaa ctggcaaacc ggcggttact aattgtcagc gacggcgccc tccagtatgt
      901 gccgtttgcc gcgctgccaa ctccttcttc caatggctcg ccttcgatca ccccgctggc
      961 actgaaccat gaggttgtcg gcttgccgtc ggcttctact cttgctgttt tgcggcggga
     1021 agtggcgtcg cgcaagccgg cgcctaaaac gattgcggtg tttgccgatc cggtttttga
     1081 cgggaacgac aagcgcgtcc aggattctct cgctcagacc agggccttaa cgccgggcac
     1141 cgcagtcgcc cgctcgcgac caggcgcaac gatttccaaa agagagatcg aaagatcggc
     1201 cagcgagtcg gggtgggatg gtgaagcgct tagcctggcc agactgccat tcacccgtcg
     1261 cgaggctgag gtcatcaagg ctttggtccc cgcggcttac cgcaaagcgg atctggattt
     1321 tgccgccagc ctggctaatg cgaagagtcc cgaacttgcg caatatcgca tcgtgcattt
     1381 tgccactcat ggattcttga acagccggca tcccgaactg tccggcatcg tgctttcact
     1441 tgtggatgag aagggcacag aacaaaacgg tttcctgaga gcgcacgaga ttcacgacct
     1501 aaagcttccg gcagaactgg tggtgcttag cggttgccgc accggactgg gtaaagagat
     1561 tagaggcgaa gggttggtag gactaacccg ggcatttatg catgcgggat cggcgcgtgt
     1621 gctggttagc ttgtgggacg ttaacgacga ggcgacggct gaattaatgt cgctttttta
     1681 tagccggctg cttggccgtg aaaagctttc accggcagca gcgctgcgcg cgacccaaat
     1741 ttcaatggca cgcgacaagc gctggtcttc accctatttt tgggccgcgt tcactatcca
     1801 gggagagccg caatgatcag ttggaatgct agcgaccttt tctgccacgg atgtctttcg
     1861 ccagatccga tacaattcgt tcagctacag cgcgcggccg tcccacatac cgccagcttg
     1921 aactgcgccg ggtcgccggc caaacgtcat aaccgtttgc attgactgcg cgcacaatca
     1981 cgatgatgcg cgagtcttct ggtcgagtcg tagccgcccg aacagttacc ttcaacgccg
     2041 catctgcctg atcggcgtca gccgactgta aattgttgcc ggttgccaaa gcctgtccca
     2101 tctcagccag gaaatctgtg cttgagaccg cggttgattt cacctgaacg tgaactcgat
     2161 gaacttcggc caacgactta cccgtcgaat tccgattcca gggcccgcgc gtgccttcct
     2221 cgccgggatc ggcgttgacg taatcgttcg tcaagagagt gcgcgccaca aaactttcat
     2281 taggctcgcg ccgcgccggc aaaggcgtgg aggcctcggc agtcgcaccc ggagtggttt
     2341 tcttttccgg atgatccaaa gcgagttgca cttcgttgct ctt
//
LOCUS       DATDBY010000114         3327 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1544764, whole genome shotgun sequence.
ACCESSION   DATDBY010000114 DATDBY010000000
VERSION     DATDBY010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3327
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1544764"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..467)
                     /locus_tag="VIT19_02235"
     CDS             complement(<1..467)
                     /locus_tag="VIT19_02235"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA];
                     GO_process: GO:0044210 - 'de novo' CTP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uridine monophosphate kinase"
                     /protein_id="HEY5837824.1"
                     /translation="MTESNKPSPAFRRVLLKLSGEALLGEQSFGIDVKVARSVAEEIK
                     QAHAIGTQIAIVVGGGNIFRGVSTSAANMDRASADYIGMLATVMNAVVLQDALENVGI
                     QTRVLSAINIPQLAEPFIRRRAIRHLEKGRIVILAAGTGNPFFSTDSAAALRAL"
     gene            complement(526..1191)
                     /gene="tsf"
                     /locus_tag="VIT19_02240"
     CDS             complement(526..1191)
                     /gene="tsf"
                     /locus_tag="VIT19_02240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011555308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HEY5837825.1"
                     /translation="MADVTAGAIKALREKTGAGMMECKKALIEAEGNEERAIEILRER
                     GLASAKKKEGRVAAEGVVGSYIHMGGKVGVLVEVNCETDFVARGEEFQQLVKDIAMHV
                     AAAEPRFVSREEVNTDTLDKEREIARAQAKNDPKNASKPDQVIDKIVEGRLNKFYEEF
                     VLLDQPFIKDPAKTVGELVTEKIAKTGEKVTIRRFARYKMGEGLSKRDDDFGDEVAKL
                     AQG"
     gene            complement(1291..2187)
                     /gene="rpsB"
                     /locus_tag="VIT19_02245"
     CDS             complement(1291..2187)
                     /gene="rpsB"
                     /locus_tag="VIT19_02245"
                     /inference="COORDINATES: protein motif:HMM:TIGR01011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEY5837826.1"
                     /translation="MKELLEAGVHFGHQVRRWNPKMKEYIFGERNGIYIIDLQKTQKM
                     FREALQAVSNMVAEDRGKTLLFVGTKRQAQDAIREEAERSGQYYVNQRWLGGLLTNFQ
                     TVQKSIKRLRDLEAMQTDGRAEKMTKKERIKLDREREGLEKNLSGIKGMGRLPDAIFV
                     IDVRKEEIAVAEANKLGIPIFAVVDTNCSPEGIDYVIPGNDDALRAVRLFASRIADAV
                     LEGQQMLTEGGATAEATEEREQAVPTTEAAAEGEAAVEAPAEPVEPDQPAEAAPTETM
                     ESNEPAAAEASAPENAEVVAAS"
     gene            complement(2371..2763)
                     /gene="rpsI"
                     /locus_tag="VIT19_02250"
     CDS             complement(2371..2763)
                     /gene="rpsI"
                     /locus_tag="VIT19_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEY5837827.1"
                     /translation="MADIQYYGTGRRKTATARVYLRPGDGSVQVNRKPFDSYFPNETL
                     RMIIRQPLNLTETANKFNILVNVAGGGPAGQAGAIRHGITRALIEYNSDLRPTLKQAG
                     LITRDPRIKERKKYGQKGARKRFQFSKR"
     gene            complement(2781..3236)
                     /gene="rplM"
                     /locus_tag="VIT19_02255"
     CDS             complement(2781..3236)
                     /gene="rplM"
                     /locus_tag="VIT19_02255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019394039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEY5837828.1"
                     /translation="MSTYFPSGAGLAQNRKWYVVDAAGKTVGHLASEVAAILTGKRNP
                     QWTPFLDMGDHVVVVNARKAMFTGSKVTQKVYRRHTLYPGGLRETTVTEMFAKHPERV
                     IELAVKGMLPKTKLGRAMAKKLKVYADAEHPHAAQLPATLDFPSRNSQK"
BASE COUNT          610 a          966 c          899 g          852 t
ORIGIN      
        1 agtgcgcgca aggcggccgc cgaatcggtc gagaagaaag gattgccggt gccggcggcg
       61 agaattacga ttctcccctt ttctaaatga cgaatggcgc ggcgccgaat gaagggttca
      121 gccaactgcg gaatattgat cgctgaaagc acgcgcgtct gaatgccgac gttctcaagt
      181 gcgtcctgga gcacaactgc attcattacg gtggcgagca tgccgatgta atcggccgag
      241 gcccgatcca tgttcgcggc gctggtggaa accccgcgaa agatgttgcc gccgccaact
      301 acaattgcta tttgggtgcc gatcgcgtgc gcctgtttga tttcttcggc gacgctgcgc
      361 gcgaccttca catcgatccc gaaagattgt tcgcccagga gggcttcacc ggaaagcttc
      421 agcagcacgc ggcgaaaggc gggggaaggc ttatttgatt cggtcacgct ggtattgttc
      481 cgtcgggctc gaagtcagtt ccgggagcgg tagcgactta acaggctaac cttgcgccag
      541 tttcgcgact tcgtcgccaa aatcgtcgtc gcgcttcgac aggccttcgc ccatcttgta
      601 gcgcgcgaat cggcggatcg taactttctc gccggtcttc gcgatctttt ccgttacaag
      661 ttcgcccacg gtcttcgccg ggtctttgat gaacggctgg tccaacaaca cgaattcttc
      721 gtaaaactta ttcaagcggc cttcgacgat cttgtcgatt acctgatcgg gcttgctggc
      781 gtttttcgga tcattcttcg cttgcgcgcg ggcaatctcc cgttccttat caagcgtgtc
      841 ggtgttgacc tcttcgcgcg aaacaaaacg cggttcggcg gcggcaacgt gcatcgcgat
      901 gtcttttacc agttgctgga actcttcgcc gcgggcgacg aaatcggttt cgcagttcac
      961 ttcgaccagc accccgacct tgccgcccat gtgaatgtac gagccgacga cgccttcagc
     1021 ggcgacgcga ccttccttct ttttcgctga cgcgagtccg cgctcgcgca ggatttcaat
     1081 cgcgcgttct tcgttgcctt cggcttcgat cagcgctttc ttgcactcca tcattcccgc
     1141 gccggttttt tcgcgcagcg ctttaattgc gcctgcggtt acgtctgcca tgattgctta
     1201 tctgctcctc ttgatttcat taaaacgcgc agcccggcgg atgtccgttg cccgcgctgc
     1261 gctcgccgac gaattagaac ttgtttgttc ttagcttgcg gcgacgacct ccgcgttttc
     1321 cggtgctgaa gcttctgcgg ccgccggctc gttcgattcc atggtctcgg tcggcgccgc
     1381 ttcagcgggt tgatccggct caacgggttc cgccggcgcc tcaaccgctg cttcgccctc
     1441 ggctgctgcc tcggtggttg ggacagcctg ttcgcgttct tcagtggctt cggcggtcgc
     1501 gccgccttcc gtcagcatct gctggccttc gagcaccgcg tcggcaatgc gtgacgcgaa
     1561 cagtcgcacg gctcgcaacg cgtcgtcgtt acccggaatc acataatcga tgccttccgg
     1621 tgaacagttt gtatcgacga ctgcaaaaat cggaatgccg agcttgtttg cttcagcgac
     1681 ggcgatctct tccttgcgaa catcgataac gaaaatcgca tccggcaggc gacccattcc
     1741 cttgatgccg gaaaggttct tctccagacc ctcgcgctcg cgatcgagtt tgatgcgctc
     1801 tttctttgtc atcttctcgg cgcgaccatc cgtttgcatc gcttcgagat ctcttagacg
     1861 cttgatcgac ttctgcaccg tttggaagtt cgtcagcagt ccgcccagcc aacgttgatt
     1921 gacgtaatac tgaccggagc gttcggcttc ttcccgaatc gcgtcctgcg cctggcgttt
     1981 cgtgccgaca aacagaagtg tcttgccgcg atcttcggcg accatattgc tgacggcctg
     2041 aagcgcttcg cgaaacatct tctgcgtctt ttgcagatcg ataatgtaga tgccattgcg
     2101 ctcgccgaaa atgtattcct tcattttcgg gttccaacgg cggacctggt ggccgaagtg
     2161 cacaccggcc tccagcaatt ctttcatcgt tacggttacc aaactcgctc tcccttgtta
     2221 actggtttat gtactcgccg cgcctctggc cttcgcgttg aaagcaacca atccaaagcg
     2281 cgacaatgga tttttgaatt tcgaaattcg aattgcgaac tgcggaattg aagcaaattc
     2341 gaaatccgca atccgaaatt cgcaatctgt ttatctcttc gagaactgga agcgcttacg
     2401 cgcgcccttc tgtccgtact tcttccgctc tttgattcgc ggatcgcgcg ttatcaggcc
     2461 ggcctgcttc aaagtcggcc gcagatcgct gttgtattcg attagcgcgc gtgtgatgcc
     2521 gtgacgaatt gcgcctgctt gtcccgcagg gccgccgccg gccacattga ccaggatgtt
     2581 gaacttgttc gcggtctcag tcaggttcag gggctggcga atgatcattc gcagcgtctc
     2641 attcggaaag taactgtcga acggttttcg attgacctga actgagccgt cgcccggccg
     2701 caaataaact cgagcggtcg ctgtttttcg acggccggtt ccgtagtatt gaatatctgc
     2761 cacgtcttaa atcctttttt ctatttttga gaattgcggg aagggaagtc gagggtcgct
     2821 ggtagctgcg ccgcgtgagg atgctcggcg tcagcataga cttttaactt cttggccatt
     2881 gcccgtccca gtttcgtttt tggaagcatc cctttcaccg cgagctcgat cacgcgctcg
     2941 ggatgcttgg cgaacatttc cgtcaccgtt gtttcgcgca ggccacctgg atagagagta
     3001 tggcgacgat aaaccttctg cgtcactttg gaaccggtaa acatcgcctt gcgcgcgtta
     3061 acgacgacca cgtgatcgcc catgtccaga aatggggtcc attgcggatt gcgtttgccg
     3121 gtgagaatcg ctgcaacttc cgaagcgagg tgaccaaccg ttttgccagc ggcatccacg
     3181 acgtaccatt ttcgattttg agccagacca gcgccgctgg gaaagtatgt tgacatagat
     3241 aagtccttct gtttttagag cctaaagggc gaacggttag aatagaaaac ggcctgtgca
     3301 ttgtcaagcg cggttgcccg agtttac
//
LOCUS       DATDBY010000115         2113 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_926475, whole genome shotgun sequence.
ACCESSION   DATDBY010000115 DATDBY010000000
VERSION     DATDBY010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_926475"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VIT19_02260"
     CDS             complement(<1..456)
                     /locus_tag="VIT19_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016448039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY5837829.1"
                     /translation="MVIYLAGEQEEHDVRLDDLTPRQIVAELDKHVVGQNAAKRAVAI
                     ALRNRVRRKKLAPDLAADVIPKNIIMIGSTGVGKTEIARRLARMSNSPFLKVEASKFT
                     EVGYVGRDVESMIRDLTEIAVEMTRQEKVEEIADKAELNVEERILDILLP"
     gene            complement(503..1066)
                     /gene="hslV"
                     /locus_tag="VIT19_02265"
     CDS             complement(503..1066)
                     /gene="hslV"
                     /locus_tag="VIT19_02265"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015365078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEY5837830.1"
                     /translation="MTKEQSPKIRSTTVLLVRRDGQVALAGDGQVTMGETVMKASAKK
                     VRRLYNDKILAGFAGATGDAFSLLTRFEGKLEQYHGNLERAAIELSKEWRTDKILRHL
                     EALLVVADDKTSFLLSGNGDVISPDDGVLAIGSGGSYALAAARALMANTQLSAREIAV
                     ESMRVAGEICIYSNSNIVVEELSVAQG"
     gene            1176..1946
                     /locus_tag="VIT19_02270"
     CDS             1176..1946
                     /locus_tag="VIT19_02270"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEY5837831.1"
                     /translation="MTTRTRPRIGITMRIELETDRFYLSRHYSEAVEAAGGLPVHIPL
                     IPDAGFLRETVAGLDGVLLPGSDSDVDPLRYGNDPHPKLGAVHPIKDETDVLVLNEIE
                     ERALPLFAICFGMQVLNVSRGGTLIQDIGSQWPNAIKHEQGVPRDRHSHSVRFLQESL
                     LHQMATGERAPVNSHHHQALETLGRELVATAWAPDGVVEAIEDPRSDRFVLGVQWHPE
                     LGWERDGFARALFERFVEEAATFAARRAGNRESAGVTA"
BASE COUNT          420 a          613 c          626 g          454 t
ORIGIN      
        1 cggcagaagg atgtcgagaa tccgctcctc cacgttcagt tcggccttgt cagcaatctc
       61 ttcgactttt tcctggcgcg tcatctcaac cgcgatttcg gtcaggtcac gaatcatgct
      121 ttccacgtcg cgaccgacgt acccgacttc agtgaacttt gaggcctcga ccttcaggaa
      181 tggcgagttt gacatccgcg ccagccgacg ggcgatctca gtcttgccga caccggtcga
      241 gccaatcatg atgatgttct tgggaatgac gtcagcggcg agatccggcg cgagcttctt
      301 gcggcggacg cgattccgca acgcgatcgc caccgcgcgc ttggcggcgt tttgtccgac
      361 gacgtgcttg tcgagttccg cgacgatctg ccgcggggta aggtcgtcca accggacgtc
      421 gtgttcttcc tgctcacctg cgagataaat aaccatttcg taagtcgatg ctaactaaac
      481 tttcccgtaa ctgtcggcgc gcctaacctt gagccacgct taactcttca accacgatgt
      541 tcgagttgct gtagatgcaa atctcgccgg cgacgcgcat cgactccacc gcgatctcac
      601 gcgcagagag ttgggtgttc gccatcaggg cgcgcgcggc ggccaacgcg taggacccgc
      661 ccgagccaat tgccaatacg ccatcatcag gcgaaatcac atcgccgttg ccggagagaa
      721 gaaacgaagt cttgtcatcg gccacgacca gcaacgcttc cagatgccga aggatcttgt
      781 ccgtgcgcca ctccttgctc agctcaatcg cggcgcgctc aagattgcca tggtactgct
      841 caagcttgcc ttcgaaccgc gtcagcaggc taaacgcgtc ccccgtcgcc cccgcgaagc
      901 ccgccaggat cttatcgttg taaagacgac ggactttttt tgcgctggcc ttcatcaccg
      961 tttcgcccat ggtgacctga ccgtcgcctg ccagtgccac ctggccgtca cgacgcacca
     1021 gcaaaacagt cgtgctgcgg attttcgggg attgttcttt cgtcatgaag tgaaacagca
     1081 ctataggaat gacggcgaag tttagtcaag ctaggcatct gcgctattat ggcgtttgcc
     1141 agtaatcctt cggttgatag ttgcaccgcg aaagaatgac gacacgaaca cggccgcgca
     1201 tcggcatcac gatgcgcatc gagctggaaa ctgacaggtt ctatctttcc cgtcattaca
     1261 gcgaagcagt tgaagccgcc ggcggtttgc cggtgcacat tcctctgatt cctgacgccg
     1321 gttttctgcg cgaaacggtc gcgggtctcg atggagtttt gctgcccggg agtgactcgg
     1381 atgtggatcc cttgcgctac gggaacgacc cgcatccgaa gctcggcgct gttcacccaa
     1441 ttaaagatga gacggacgtg ctggtcttga atgaaattga agagcgcgct ctcccgttgt
     1501 tcgcgatctg ttttgggatg caggtgctga acgtctcgcg cggcggcacg ttgattcagg
     1561 acatcggcag ccaatggccg aacgcgatta agcacgaaca gggcgtgcca cgcgatcggc
     1621 attcgcacag tgtccgcttc cttcaggaga gtttgcttca ccagatggcc acaggcgagc
     1681 gcgcaccggt gaacagccac catcatcagg cgctggaaac actgggaagg gaactggttg
     1741 cgacggcgtg ggccccggac ggagtggtgg aggcgataga agatccgcgc agcgatcgtt
     1801 tcgtgttggg cgtgcaatgg catcccgagc tgggctggga acgcgatgga tttgctcgcg
     1861 cgctgttcga acgatttgtg gaagaggccg ccacgtttgc cgcgcgtcga gcaggcaatc
     1921 gtgaatcggc aggggtcact gcatgatttc gctgagcctt gagaatcggg ttgcagtcgt
     1981 taccggcggg tcgcgcggga ttgggcgcgc ggccgttgac tgctttgcca ggctcggctc
     2041 cagcgtcgta gtgaattatt tgaaggacaa aaaagccgcc gatgcggccg tcggatttgc
     2101 ggaagaacaa ggc
//
LOCUS       DATDBY010000116         2556 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2960877, whole genome shotgun sequence.
ACCESSION   DATDBY010000116 DATDBY010000000
VERSION     DATDBY010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2556
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2960877"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VIT19_02275"
     CDS             complement(<1..268)
                     /locus_tag="VIT19_02275"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5837832.1"
                     /translation="MNGSTLKQGKLSRSADVVIIGGGVIGLSIARQLALRGLRNVTVI
                     ERGEFGKEASWAAGGILAPQVEADRADDFFELASASRDLYPAFAR"
     gene            422..1423
                     /locus_tag="VIT19_02280"
     CDS             422..1423
                     /locus_tag="VIT19_02280"
                     /EC_number="1.1.1.41"
                     /inference="COORDINATES: protein motif:HMM:TIGR00175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005962 - mitochondrial isocitrate
                     dehydrogenase complex (NAD+) [Evidence IEA];
                     GO_component: GO:0045243 - cytosolic isocitrate
                     dehydrogenase complex (NAD+) [Evidence IEA];
                     GO_function: GO:0004449 - isocitrate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0006102 - isocitrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate dehydrogenase (NAD(+))"
                     /protein_id="HEY5837833.1"
                     /translation="MAHRITLIPGDGIGPEVASAVVRIIEASGVEVEWEEHVAGQDAL
                     DKFGKTLPDELLESIKRNKVGLKGPITTPVGKGFTSVNVGLRKALDLYANLRPIRALP
                     NVPCRNPDLDLVVVRENTESLYSGLEHEIIPGVVESLKIITEKASTRIAKFAFDFARE
                     EKRKKITCTHKANIMKMSDGLFLQCFRTTAQEYSEIESADMIIDNAAMQLVMRPEQFD
                     ILLCENLYGDIVSDLCAGLIGGLGLVPGANIGEKGAVFEAVHGSAPDIAGKGIANPTA
                     LLQSAILMLRHIEERTAADKIEGAMLTVFEEGKVRTRDIGGSASTNEFAEAIIAKMK"
     gene            1606..2229
                     /locus_tag="VIT19_02285"
     CDS             1606..2229
                     /locus_tag="VIT19_02285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837834.1"
                     /translation="MRHKAISQILFIALALPITFLVSPLSTSAQAAKPATATQATTAA
                     QPSAVDRAAVQRFEQRVKDYMKLRNAVKAKVPKLSKDATPQQIETYRESLEAGVRNAR
                     TNAKRSDIFNHDGSDYIRRTLKLNFVGKDRVELRNIVFDGETATVKVRVNYPYPEPAE
                     FVEMPPTVLLNLPQLPPEVKYRFVGRNLLLIDEDISLILDYMTNALP"
     gene            2258..>2556
                     /locus_tag="VIT19_02290"
     CDS             2258..>2556
                     /locus_tag="VIT19_02290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837835.1"
                     /translation="MKRYIFPAVVLAALLFSSSLSPSVYSQTSNGNGSKNANAARAHS
                     AVKLTLPLKKDSLKFAVMGDTGTGSDKQQQVADKMVQYHGTYPYEFVLMLGDNMYG"
BASE COUNT          633 a          699 c          676 g          548 t
ORIGIN      
        1 ctcgagcaaa ggccgggtaa agatcacgac tcgcacttgc cagttcgaaa aaatcatcag
       61 cgcgatcagc ttcaacttgt ggggcgagga ttccacccgc cgcccacgat gcttctttgc
      121 cgaactcgcc gcgttcaatc accgtcacat tccgcaggcc gcgcaaagcg agttggcgcg
      181 cgatcgacaa tccgataacg ccgccaccga taatcacaac atcggcgctt cgcgataact
      241 tgccttgttt cagggttgag ccattcatgt acttggtact ttgttcttgg tactttgccc
      301 tttgactttt gatggactga tcaccaaagt actaggaaca aagcaccaag tacaaagcat
      361 caagtacaag cacgaagata gccaactgac gactgactac taactactga ctggtttggt
      421 tatggcgcat cgtatcacat tgattcccgg cgatggcatc ggccctgaag tcgcctccgc
      481 cgtcgttcgc atcatcgaag cttccggcgt cgaggtcgag tgggaagagc acgtcgccgg
      541 ccaggacgcg ctcgataagt tcggaaagac gctgcctgac gaactgctcg aatcaatcaa
      601 acgaaacaaa gtcggattga aagggcccat caccacgccc gtgggaaagg gtttcacttc
      661 agtcaacgtg ggcctgcgca aggcgctcga tctttacgcc aacctgcgtc cgattcgcgc
      721 gttgccaaat gttccgtgtc gcaatccgga cttggatctg gttgtcgtgc gcgaaaacac
      781 ggaaagcctt tactcaggtc tggagcacga gatcattccg ggagtggtcg agagcctcaa
      841 gatcatcact gagaaagctt caacgcgcat tgctaagttc gccttcgact tcgcccgcga
      901 ggaaaagcga aagaagatca cctgcacgca caaagccaac atcatgaaga tgtccgacgg
      961 acttttcctg caatgcttcc gcaccacggc gcaggaatac tctgaaattg aatcggccga
     1021 catgattatc gacaacgcgg cgatgcagct cgtgatgcgg cctgagcaat tcgacatcct
     1081 gctgtgcgaa aatctttacg gcgacatcgt ttctgatttg tgcgcgggct taattggcgg
     1141 acttggtttg gttcccggag cgaacatcgg cgagaagggc gcggtgttcg aagccgtcca
     1201 cggttcggcc cccgacattg ctggaaaggg aatcgccaac cccacggcgt tgctgcaatc
     1261 ggctattctg atgctgcgtc acatcgaaga acgcactgct gccgacaaaa tcgaaggcgc
     1321 aatgctgacg gttttcgaag aaggcaaagt gcgcacgcgc gatattggcg gttcagccag
     1381 cacgaacgag ttcgccgaag cgatcatcgc aaagatgaaa tagtccgcga ctgtgtaaca
     1441 tcccaatcct cgattgtcct acaagcggtc gctgcaactt cgcaatcgaa atgtcttaat
     1501 aacgctctat ccgcgtaaat cgccgaaact cacgacttag ttcaaagcgg agtctgcgaa
     1561 ccatgcacgc tcatggttgg cattcggctt gcccaatgtt tcagcatgag acacaaagca
     1621 attagccaaa tcttgtttat cgctttggct ctccccataa cctttcttgt aagtccgtta
     1681 tcgacgagtg cgcaggccgc gaaacccgcc acggctactc aagctacgac tgcggcgcaa
     1741 ccttcagccg tcgatagagc agcggtgcag cgttttgagc agcgcgtgaa ggactacatg
     1801 aagcttcgca acgcggtgaa agccaaagtg cccaagctct cgaaagacgc gacgccgcaa
     1861 cagatagaga cgtatcgcga gagtcttgaa gccggggtcc gcaatgcccg gaccaacgcg
     1921 aagcgcagcg acatctttaa ccatgatggt tcggattaca ttcgacggac tctgaaattg
     1981 aatttcgtgg gtaaggatcg agtagaactt cgcaatatcg tttttgacgg tgagacggca
     2041 acggtgaaag tccgggtgaa ctatccgtac ccggaaccgg ctgagttcgt cgagatgcca
     2101 ccgaccgtgc tgttgaatct gccgcagttg ccgcccgagg tgaagtatcg ctttgtcggc
     2161 cgcaacctgc tgctaattga tgaggacatc agtctaatcc tggattacat gactaatgct
     2221 ctgccgtaga gtgcaaagca aaggagcaag cgaaaccatg aaacgatata tctttccagc
     2281 ggtcgtattg gccgcgctgc ttttctcaag ctcgctctct ccatcagttt actcgcagac
     2341 ttctaacggg aacggatcga agaacgccaa tgccgcccgc gcacatagcg cggttaagtt
     2401 aaccttgccg ctcaagaaag attcgctgaa gtttgcggtc atgggtgaca ccggcaccgg
     2461 gagcgacaag caacagcaag tcgcggacaa gatggtccag tatcacggga cgtatccgta
     2521 tgagttcgtg ttaatgcttg gcgacaacat gtatgg
//
LOCUS       DATDBY010000117         4966 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_3053731, whole genome shotgun sequence.
ACCESSION   DATDBY010000117 DATDBY010000000
VERSION     DATDBY010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4966
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3053731"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VIT19_02295"
     CDS             <1..240
                     /locus_tag="VIT19_02295"
                     /inference="COORDINATES: protein motif:HMM:NF017509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837836.1"
                     /translation="KIEVTDQDIDAEINAIAEASKQSAEQVRGILTKQGGERSIAGRL
                     RNRKALDFLVANASVIDAEWEEETQESEAGSQKPE"
     gene            298..882
                     /gene="clpP"
                     /locus_tag="VIT19_02300"
     CDS             298..882
                     /gene="clpP"
                     /locus_tag="VIT19_02300"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEY5837837.1"
                     /translation="MALIPMVVEQTSRGERAFDIYSRLLKDNIIFLGTPIDDQIANLI
                     VAQLLFLEAEDPEKDINLYINSPGGSVTAGLAIYDTMQFIRPDVTTICIGMCASMGAL
                     LLTAGAKGKRFALPNSRILIHQPSGGMQGQATDVRIHAEELIRIRELTSQILAKHTGQ
                     DMEQIERDVERDRYLSAAQAKEYGLIDEVIAHRE"
     gene            986..2230
                     /gene="clpX"
                     /locus_tag="VIT19_02305"
     CDS             986..2230
                     /gene="clpX"
                     /locus_tag="VIT19_02305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEY5837838.1"
                     /translation="MVRRSDETLRCSFCGKSQNEVKKLIAGPTVYICNECIDICNEII
                     SDDQQAESVASRPPLPKPGEIKNFLEEYVIGQDETKKRLAVAVYQHYKRIELARRRSD
                     VEIQKSNIILIGPTGTGKTLLAQTLARMLSVPFTIVDATTLTEAGYVGEDVENIILKL
                     LQAANGDVERAQQGIIYIDEIDKICRKDENPSITRDVSGEGVQQALLKILEGTIANVP
                     PQGGRKHPHQEFFPVDTTNILFICGGAFVGLEKVVEKRLRNKSLGFHAEVKSGSQRNA
                     EALGLVQPEDLIRYGLIPEFVGRLAVVGVLHELDEAALIKILTEPKNALVKQYQKKFE
                     FDNVKLRFTEDALRRVAQQAVARKVGARGLMMILEELLLDAMYTLPSQKRVKEFVITS
                     EMVERHRAMPGEGLAGVDDAAA"
     gene            2717..4597
                     /locus_tag="VIT19_02310"
     CDS             2717..4597
                     /locus_tag="VIT19_02310"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEY5837839.1"
                     /translation="MKPRLAAITGKLKDTVIAMSEGPVLIGRQTGANLRIRNAAVSRR
                     HALIEKDGDKYIIADLDSRNGTFVNDMPVKRCELHHGDRVQIGESQFFFLIEDTEDPS
                     QTSEIRFDEAPLLGSPAVRMTYSDAVFVMARDLSALLKISTTINAIRDLDKLEKALLD
                     LLFEVVPARRGAILLSSNHADTGDEFSSVLTLDRVEGVGQTVNVSRTIVRRVLNDGAA
                     ILINEADNNADLKTESLIAARSRSVLCVPLIMHDRKLGVIYLDSDEPQAQFDENHLQM
                     ATAVAAIASVAIHNARNFKDLENENARLMVDADIEHNMVGESPLLQRVYQLISKVAPT
                     DSTVLIFGESGTGKELAARAIHRNSKRGDKPFIAANCAAFAETLLESELFGHEKGAFT
                     GALLQKKGRLELADGGTIFLDEIGDLSPSLQTKLLRVLQEREFERVGGTRTIKVNIRL
                     LAATNRDLEDLIKTGGFRQDLYFRLNVVKLTMPPLRERRDDIPLLANYFARKYAEKCN
                     RRVMGMSSEARKRLMTYDWPGNVRELENAIERAVVLGTTEQILADDLPEAVLEADATV
                     SSEEASSYHEQVVQTKKRMITDAMKQANGNYTAAAKLLNLHPNYLHRLIRNLNMKDEL
                     KT"
BASE COUNT         1209 a         1362 c         1370 g         1025 t
ORIGIN      
        1 aaaatcgaag tcaccgatca ggacattgat gccgagatca atgcgatcgc agaggcttca
       61 aaacagtcgg cagaacaagt gcgaggtatc ttgacaaagc aagggggcga acgtagcatc
      121 gctggcagat tgcgcaatcg caaagcgctg gattttttag tcgcgaatgc gagcgtgatc
      181 gacgccgagt gggaggaaga aacgcaggag tcagaagccg ggagtcagaa gccagaataa
      241 aacagcacaa cgttttttct gcttcctgcc tactgcttac tgcctcctga ttttgttatg
      301 gcacttattc caatggtcgt cgagcaaacg tcgcgtggcg aacgcgcgtt tgacatttat
      361 tcccgtctcc tcaaagacaa cattattttc ctgggcactc cgatcgacga tcagatcgca
      421 aatctgatcg ttgcgcagtt gctgtttctc gaagccgaag acccggagaa agacattaac
      481 ctctacatca attcaccggg tggttcggtc accgcgggcc tcgcgattta cgacacgatg
      541 caattcattc gtccggacgt gaccacgatc tgcattggca tgtgcgcatc gatgggcgcg
      601 ttgctactga ccgcgggcgc aaagggaaag cgcttcgcgt tgccgaactc acggattctc
      661 attcatcaac cgtcgggcgg catgcaggga caggccactg acgtgaggat tcacgccgag
      721 gaactgatcc gaattcgcga attaacttca cagattctcg caaaacatac cggacaagac
      781 atggaacaga ttgagcgcga cgtcgagcgt gatcgttatt tgtccgccgc gcaggcgaag
      841 gagtatggtt taatagacga ggtgattgcg caccgcgaat aggtcgcaaa aaccgagttc
      901 aaggagcaac cacttaggtg cgcgctcgtc ggcctcaaca gtcaggtagc cccggccagt
      961 ctcaaaggat ggagttcccc ggactatggt aagaagaagt gacgaaacgc tgcgttgttc
     1021 gttctgcggg aaatcgcaga acgaagttaa gaaactcatt gcgggtccca ccgtctatat
     1081 ctgcaacgag tgcatcgaca tctgcaacga gattatcagc gacgatcagc aagctgaatc
     1141 cgtagcttcg cgtcccccgc tgccaaagcc aggcgagatt aagaatttcc tcgaagagta
     1201 cgtcattggc caggacgaaa cgaagaagcg tttggccgtc gcggtttatc aacactacaa
     1261 acgaatcgag ttagcgcggc gacgttcaga cgtcgagatt caaaagtcga acatcatttt
     1321 gatcgggccc accggcaccg gtaagacact gctcgcccag accctcgccc gcatgttgag
     1381 cgtgccgttc accatcgttg atgcgacgac gctgacagaa gccggctacg tcggtgaaga
     1441 cgtcgagaac atcatcctga agctcttgca ggcggcgaac ggtgacgtgg aacgcgccca
     1501 gcaaggcatc atctacatcg acgagattga caagatttgc cgtaaagacg aaaacccgtc
     1561 gatcacccgc gacgtttccg gcgaaggcgt gcagcaggcc cttctgaaaa ttctcgaagg
     1621 cacgattgcc aacgttcccc cacagggcgg acgcaaacat ccgcaccagg aattctttcc
     1681 cgtcgacacg accaacattt tgttcatctg cggcggcgca ttcgtcggct tggaaaaggt
     1741 tgtggagaag cggctgcgta acaagtcgct cggtttccat gccgaggtaa agtctggctc
     1801 ccaacgtaac gcggaagccc tggggctcgt gcaaccggaa gatctaatta ggtatggctt
     1861 gataccagag tttgtgggac ggctggcagt tgtgggcgtg ttgcacgaac tcgacgaagc
     1921 ggcgttgatc aagattctca ccgaaccgaa gaacgcgctg gtcaagcagt atcaaaagaa
     1981 attcgaattc gacaacgtca agctgcgatt caccgaggac gcgctgcgac gcgtggccca
     2041 gcaggccgtc gcgcggaagg tcggcgcgcg cggtttgatg atgatccttg aagaactgct
     2101 gctggacgca atgtacactc tgccgtcaca gaagcgcgtg aaggaattcg tgatcaccag
     2161 cgagatggtt gagcgacatc gcgcgatgcc tggcgaagga ctcgccggcg tagacgacgc
     2221 agccgcgtaa aattctcacc accaaaaacc gaaacggcaa ccctggggtt cagcagggtt
     2281 gccgttttgc ttgaagcgag ctttcaaatc ccgctcgccc ttggcgtggg gcggaagttg
     2341 gtagcatccg cggcgatgct gaccattgtt cgtaactaat gaggatcagt acgagcgccc
     2401 atgtctctgc tacttgtgtg ccacgaccgc gcacgcgccg ttgagtcccg cctgactaca
     2461 gctaaggccc ttaatagcaa catctacagg aatcgataaa gtctttgcgt gaataagttc
     2521 tctcgaccag cggggcaact tttctatcta atcagatagc gcgattaacc attcggatag
     2581 agcatgcttc acacttggtg gcgaagcgag gtcagacgtt ccgtgtcgtt agcaaaacct
     2641 gttgcttcat cacggtcaca taagtacact gctggccccg accaagtaca ctgctgggcc
     2701 ccgaccagag caacgtatga aaccacggct cgccgctatt actggcaagt tgaaagacac
     2761 ggtcatcgcg atgagcgagg gaccggtact gatcggccgt caaaccgggg cgaacctccg
     2821 gattcgaaat gccgccgtct ctcgccgcca cgccctcatc gaaaaagacg gagacaaata
     2881 catcattgcg gatctcgaca gtcgcaacgg cacgtttgtt aatgacatgc cggtaaagcg
     2941 atgcgaactc catcacggcg atcgggtgca aattggcgaa tcgcagttct ttttcctgat
     3001 cgaggacacc gaagatccct cacagaccag cgagattcga tttgacgaag cgccgctgct
     3061 cggctcgccg gccgtccgga tgacttacag cgacgcggtg tttgtgatgg cgcgcgacct
     3121 cagcgcgctc ctcaaaatca gcaccaccat caacgcgatt cgcgatctcg ataaactgga
     3181 aaaggccttg ctcgatttgt tgtttgaagt ggttccggcg cgacgcggcg caatcttgct
     3241 gtccagtaac cacgccgaca ccggtgatga gttttcttca gtcttaacgc tcgaccgcgt
     3301 cgagggggtc gggcaaacgg tcaatgtcag ccgcacaatt gtgcgacgcg tgctgaacga
     3361 tggcgccgct atcctgatca acgaggccga caacaacgct gacctgaaaa cagaaagtct
     3421 gattgccgcg cgctcacgat ccgttttgtg cgtccctctg atcatgcacg atcgaaaact
     3481 cggcgtgatt tatctggaca gcgacgaacc gcaggcgcaa ttcgacgaga atcacttgca
     3541 gatggcgact gcggtcgccg ccatcgcttc cgtcgccatc cacaacgcgc gcaattttaa
     3601 agatctggaa aacgaaaacg cccgcctgat ggtcgatgcc gatatcgaac acaacatggt
     3661 gggcgaaagc ccgctgctgc aaagagtcta tcaactcatc tcgaaggtcg ccccgacgga
     3721 ttcaactgtc ctgatctttg gcgagagcgg caccggaaaa gaactggcgg cgcgcgcgat
     3781 tcatcgcaac agcaagcgtg gtgataaacc cttcatcgcg gcaaattgcg ccgcgttcgc
     3841 cgaaaccctt ctggagagtg agttgttcgg ccacgaaaag ggcgctttca ccggtgcgct
     3901 acttcagaag aagggacggc tcgagctcgc ggacggcggc acgatttttc ttgatgagat
     3961 cggcgatttg tccccttccc tgcaaacgaa actgttgcgt gttcttcagg agcgcgagtt
     4021 tgaacgcgtc ggcgggaccc gtacgatcaa agtcaacatt agattgctgg cggcgaccaa
     4081 tcgcgatctc gaagacctga tcaagacagg cggcttccgg caggatttgt acttccgcct
     4141 caacgtagtg aagttaacta tgccgccact gcgcgagcgc cgcgatgaca ttccgctgct
     4201 cgcaaattat ttcgcccgaa aatacgccga aaagtgcaac cgccgggtga tggggatgtc
     4261 ttctgaggcg cggaagcgtt tgatgactta cgactggccc ggcaacgttc gtgaattgga
     4321 aaacgcgatt gagcgggccg tggtacttgg caccactgag caaattctgg ctgacgatct
     4381 tcccgaagcg gtgctcgagg cggatgcgac cgtttccagc gaagaggctt ccagctacca
     4441 cgagcaggtc gtgcaaacta agaagcgaat gattaccgat gccatgaaac aggcaaacgg
     4501 gaattacacg gcggcggcca agctgctcaa tctacatccc aattacctgc accggctgat
     4561 tcgaaatctc aacatgaagg acgaactgaa aacctagcca gcgtttggac tacttcttcg
     4621 gctttgtcac gttacccgtg aatctgaatg cctaatcgcg gaaattccga atcctcgact
     4681 tgagattcgt ggtagcgcga cgatggaata tcgtttacaa tcaacgctgg ttaacagaag
     4741 cgcgaggcga caaaggcgac tggccttttt cgctgcctga cgcggcccgc ggtgaaattg
     4801 aaagttatgg ccgtattcgt cgtttaactg actgttccgc cccaatctcc aggagtttct
     4861 cgttcattcc gcagtaagca atcatggaag aatattcgga ccgaaccccc gctgacatcg
     4921 cgcgctatcc gatggtgccg attcgcgacg tcgtaatttt cccgtt
//
LOCUS       DATDBY010000118         6769 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2973823, whole genome shotgun sequence.
ACCESSION   DATDBY010000118 DATDBY010000000
VERSION     DATDBY010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6769
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2973823"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1400)
                     /locus_tag="VIT19_02315"
     CDS             complement(<1..1400)
                     /locus_tag="VIT19_02315"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY5837840.1"
                     /translation="MKRIFLVFSIVLAMVGQIAARPHFPSLAPQRQGQSAQAKTTTKP
                     ASDINSRVLPNGLEVVTLEDHSVPLVTIELAVRNGSFTEPPELNGLSHLYEHMFFKAN
                     RAIANSDQYLQKIGQLGIAYNATTREEVVHYYFTTTSPNLRTAMNFMRDASRYPLFDK
                     GEFERERQVVIGEIDRNESNPYYYLNLEMTNRLYYKYPSRKNPLGSRQTVSAATTDMM
                     RLIQSRYYVPNNSALIVTGDVQFEEVFKLAQELFGDWPRRERDPFVEFPMVEHPPLAK
                     SEGAVVQQPVQNVIINIGWHGPSTVKDNPGTYAADVFAFILTQPNSRFQRNLVDSGLV
                     AGVSFGYLTQRNVGPIQIIAQTTPDKARAALKAIYNEVAHFNDKDYFTDEQMESAKAL
                     LEADDLYSREKLSEYAHTLSFWWSSTGLDYFRGYLPALRRTSRPDINRYVTTYIQGKP
                     HIGLALISTEAQQQVKL"
     gene            complement(1661..3418)
                     /locus_tag="VIT19_02320"
     CDS             complement(1661..3418)
                     /locus_tag="VIT19_02320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEY5837841.1"
                     /translation="MTSLRKLLTAFVVLQALAAAIQAQAPETSSTSKSGVITGSVTSS
                     SGDLPGNTAVYASPLGVNVQPQSAVISSDGAFRIENLEIGVYRVWASAPGFVVDSQNI
                     TPESRGIYHTGDSVTLSLRKGGVITGRVLKSNDTPVVAASVRAFRVRDENGKPTEGSS
                     ASSERMTDDRGMYRMYGLLPGTYIISAGGTSRFFGGFVTTEHDQDVPTYAPSATRDTA
                     QEVVVRSGDETTADIQYRGEPGHAISGTVLGFPPVQGGMSSGGTVNLTDVKTRTMMVG
                     AQASSFNDHVFVFYGLPDGEYELVAQQFSQTRDVRASEPKRIKVQGADVTGVNLTLVP
                     LPTITGRVILDSSSPADCVKRRATAFQETAVNVRRQKRPAKSGASEEALAEAVPLSSL
                     EQSAEAVPDAKGEFILRNLRAGTYRLNVLLPSAAWYFRSVALGPNTKATDWKVISDGV
                     SVKQSVSGLTLTISEGAAGLRGRITVAEGQRLPSRTIVYLVPAEKETAPNLLRYFEAR
                     VESDGVFNIRNVAPGDYLIHARVAEGDTPRMIAIREDPDLRNAVTREAEKAKQSVTLK
                     ACERLENYEFAYPPTTKPQ"
     gene            complement(3415..5100)
                     /locus_tag="VIT19_02325"
     CDS             complement(3415..5100)
                     /locus_tag="VIT19_02325"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEY5837842.1"
                     /translation="MPLQRLSLTFALALAGLLMLVPLSAHAQTSPASAKPTGTVSGKV
                     TVNEKGVPDILVAAQLLDQPFRQPAARAKSDATGRYRLTGLPAGQYQITAVAPTLAPE
                     QSGYSGSMYRTGKTLVLAPGEEADDVDVKLVHGGVITGRVTDADGGPVIEERINLQMV
                     DQAGNVNQANIPMWNYQMSQTDDRGIYRIYGLAAGRYRVSVGSTEGGFMMSGKRMYYA
                     VTFYGNTSDAAKASVVELQEGTEATNIDIRVGRATNTFVASGRIVDAENGQPIPGIRL
                     MYGPARANQPFYGGFVGMPTSARGEFRMEGLEPGRYGVSVSASFESSAHYADPVFFEI
                     TDADVTNLEVKATRGQTLSGGVVFEGSRAKELLQQMGALRVGASVSSPTNPQNQTSSA
                     SSIAADGSFKLSGLRPGKARLYIYTGPGSALRGITILRVDRGGVDVTQNLEVQAGESI
                     TDLRIIATLGTGTIRGTVRFVGGEAPPNIRLFVNTQRESANPSGGGPVDARGRFVISS
                     LTSGTYEVTLHVGFNGPPGARPLKPQVQTVTVLEAGETQVDFIVDLTPKEGGP"
     gene            5265..>6769
                     /locus_tag="VIT19_02330"
     CDS             5265..>6769
                     /locus_tag="VIT19_02330"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY5837843.1"
                     /translation="MPLLKITDASGRQSEHTLAPKLTCNIGRAPDNQIVLDDPRASRH
                     HAHIQPADDGSFVIVDGVYVNGKINRSANKIFINGEQKFEHALKNGDRVTIGASTIKF
                     EQPKEERTADLSYDDKPLGHTQVLMSAKDVLSTVLKQQADTGKLPGAGRDKVLEQLQR
                     KANILAELYEMSKALGSGFDLDRIFKMATDIIFRSTPADRVVALLADGVVTEQNADEA
                     KLFPIATRARDEKLEAYAKKMTIGRTITRKVMKERVALLSQDAAAEEQFAGVDSIVSQ
                     GVRSTICAPLFTEAGVHGALYADRLDPFSAFKPDDLELISAVAAQTAIAVENVRAHER
                     LAKEEVARANYSRFLPEYVVKQMLENPESFKLGGITQTITILFADIRGFTRISEHAAP
                     EKIVDLLNRYFSAMTDIIFAHGGTLDKYLGDGLMALFGAPTTTPKDAANALAAAVAMQ
                     RRMISINAELREEGFQEIGIGIGLHTGEVTVGYIGSERRSEYTAIGDAVNTA"
BASE COUNT         1372 a         1953 c         1985 g         1459 t
ORIGIN      
        1 agcttcacct gctgttgcgc ttccgtggaa ataagcgcca gcccaatgtg gggcttgccc
       61 tgaatatacg tggtgacgta acggttgata tcggggcgcg aagtgcgacg gagggccggc
      121 agatagccgc ggaaataatc caggccggtc gaagaccacc agaagctcaa cgtgtgcgcg
      181 tattcgctca acttttcgcg cgagtagagg tcgtccgctt caagcagcgc tttggcgctt
      241 tccatctgtt cgtcggtgaa ataatccttg tcgttgaagt gcgcgacttc gttatagatc
      301 gctttgagcg cggcgcgcgc tttgtcgggc gtcgtctgcg cgatgatttg aattggcccg
      361 acgttgcgtt gcgtcagata gccgaacgag acgccggcga ccaggccgct gtccacaagg
      421 ttgcgctgaa agcgcgagtt aggctgcgtc aggatgaacg cgaagacgtc ggccgcgtac
      481 gtgccgggat tgtctttgac ggttgagggg ccgtgccaac cgatgttgat gatgacgttc
      541 tgcaccggtt gctgcacgac ggcgccttcg ctcttggcga gtggcggatg ctcgaccatt
      601 ggaaattcca cgaacggatc acgctcgcgg cgcggccaat cgccgaaaag ctcctgcgcc
      661 aatttgaaaa cctcttcaaa ttgaacgtcg ccggtcacga tcagcgccga attattcggc
      721 acgtagtagc gcgactgaat cagccgcatc atgtcggtcg tggccgctga aactgtctgc
      781 cgacttccca gcgggttttt ccggctcgga tatttgtagt agagccggtt cgtcatctcg
      841 agattcaggt agtagtacgg attcgactcg ttgcgatcga tttcgccgat cacgacctgg
      901 cgttcgcgct cgaactcgcc tttgtcgaac agcggatagc gcgacgcgtc gcgcatgaaa
      961 ttcatcgccg tgcgcaaatt cggactggtc gtcgtgaagt agtaatgcac gacttcttcg
     1021 cgcgtcgtcg cgttgtaggc gatgccgagc tggccgatct tctggaggta ttggtcggag
     1081 ttcgcgatgg cgcgattcgc cttgaagaac atgtgctcgt agagatgcga cagcccgttc
     1141 aactcaggcg gctcagtgaa tgaaccgttg cgtaccgcca gctcgatcgt gacgagcggc
     1201 acggagtgat cttccagcgt gaccacttcc aggccgttcg gcagtacgcg gctgttgatg
     1261 tctgacgccg gtttggttgt tgtttttgcc tgtgcgcttt gaccttgccg ttgcggcgca
     1321 agactgggaa agtgcggtcg tgcggcgatc tgcccgacca ttgccaacac gatgctgaaa
     1381 acaagaaaaa ttcgtttcac gttaagattc ctgtcctacg gcgaaatagg ctttaacctg
     1441 ccgcattaat gcgctaatac gcgcgaaact gtaaaaggga ttcaaaaaca ctctagcata
     1501 cggtctgctg agtcatagag cgcacccagc ggatgtggca cagactttag tctgtgtttc
     1561 tccgtcgaaa tcacagactg aagtctgtgc cacttcggaa cggttcgatg aagatgtggc
     1621 ggaaatggat gtcagtcgcg accgccaact cgaggccagc ctattgcggt ttggttgtcg
     1681 gcgggtaggc aaattcgtag ttctcgaggc gctcgcacgc tttcagcgtc acactctgct
     1741 ttgctttttc ggcttcacgg gtgacggcgt tcctgagatc gggatcttcg cggatcgcaa
     1801 tcattctcgg tgtgtcgccc tccgcaaccc gcgcgtgaat caaataatct ccaggcgcca
     1861 cgttacggat gttaaagacc ccgtcacttt ccacgcgcgc ctcgaaatac ctgagcaggt
     1921 tcggcgcggt ctctttctcg gccggaacga gatagacaat ggtgcgcgaa ggcagtcgct
     1981 gtccttcggc gaccgttatg cggccgcgca ggccggctgc gccttcgctg atcgttaagg
     2041 ttaggcccga aaccgattgc tttacgctga cgccatcgct gattactttc caatctgttg
     2101 ccttggtatt tggaccgagc gccaccgacc ggaagtacca cgcggcgctt ggcaggagca
     2161 cgttcaatcg ataagtgccg gcgcgaagat tgcgcaatat gaactcacct ttcgcgtcag
     2221 gcaccgcttc ggcggattgt tcaagcgagc ttaacggcac tgcctcggcc agcgcttctt
     2281 ctgacgctcc agacttcgcc ggtcgctttt gccgccgaac gttgacggct gtctcctgaa
     2341 aagcagtcgc ccggcgtttc acacaatccg ccggagagct gctgtcgaga atcacccggc
     2401 ccgtgatcgt gggaagcgga accagggtga gattcacgcc ggtgacgtcg gcgccctgca
     2461 ccttaatgcg tttcggctca gacgctctaa cgtcgcgtgt ttgcgaaaac tgttgcgcca
     2521 ccaattcgta ttcaccgtcg ggcagtccgt aaaaaacgaa gacgtggtca ttgaaagacg
     2581 aggcctgcgc ccccaccatc atcgttcgcg tttttacatc ggtgaggttg acggtcccgc
     2641 cggaactcat ccctccttgc acgggcggga aaccaagcac cgttccgctg attgcgtggc
     2701 ccggttcgcc gcgatactga atgtcggcgg tcgtttcgtc gccgcttcgc acgacaactt
     2761 cctgggcagt gtcgcgggtg gccgacggcg cgtaggtcgg cacgtcctgg tcatgttccg
     2821 ttgtgacgaa tccgccaaaa aaccttgacg tgcctccggc tgaaattatg taggtccccg
     2881 gcagcaaacc gtacatacga tacatgccgc gatcgtcagt cattctctca gaggacgcgc
     2941 tgcttccttc cgtcggcttg ccgttttcat cccgaacgcg aaaagcgcgg acgctcgcgg
     3001 cgaccaccgg cgtgtcattg cttttgagca ctcggccggt aatgactcca ccctttctta
     3061 aactaagtgt gactgaatca cccgtgtgat aaatgcctcg cgactctggt gtgatgtttt
     3121 gcgagtcgac gacgaacccc ggcgcgcttg cccagacgcg gtaaacacca atctccagat
     3181 tctcaatccg gaacgcgccg tcgctgctga taacggcgct ttggggttga acgttaacgc
     3241 ccagcggcga cgcgtaaacg gccgtattcc caggaagatc tccagatgaa gaggtgacgc
     3301 tccccgtaat aactcccgat ttactggtcg agctggtttc cggcgcctgc gcctggattg
     3361 cggcagcgag agcctgaagc acgacgaagg cggtcaacag ttttcgcagc gaggtcacgg
     3421 cccaccttct ttcggcgtta gatccacgat gaaatccact tgagtttccc cagcctctaa
     3481 cacggtgact gtctgaacct gcggtttgag cggacgtgct cccggcggtc cgttgaagcc
     3541 cacgtgaagt gtcacttcgt atgtgccgct cgtcagacta ctaatgacaa aacggccccg
     3601 cgcgtccacc ggtccgccgc cgcttggatt tgcgctctcg cgctgggtgt tcacaaacag
     3661 acggatgttc ggcggcgctt ctcctccgac aaatctgacg gtgccgcgaa tggtgccggt
     3721 gccgagcgtt gcgataatgc gcaggtctgt tatggattca ccggcctgaa cctccaggtt
     3781 ctgggtgaca tcgacgccgc cgcgatccac tcgcaggatc gtgatgccgc gtagcgcaga
     3841 acctggcccg gtgtagatgt aaaggcgcgc cttgcccggt cggagacctg aaagcttaaa
     3901 gctaccgtct gcggcgatcg atgaggcact ggatgtttgg ttctgcggat tggtcgggga
     3961 actaacgctg gcgccaactc tcagcgcgcc catttgctga agcagttctt ttgcgcggct
     4021 gccttcaaaa actacaccgc cgctcaacgt ctgaccgcgc gtcgccttca cttcaagatt
     4081 ggtgacgtcg gcgtccgtaa tctcaaagaa caccgggtcg gcgtagtggg cggatgattc
     4141 gaaagatgcc gaaaccgaca cgccgtaccg tccgggctcg aggccttcca tccggaactc
     4201 gccgcgtgcg ctggtcggca taccgacgaa gccgccatag aaaggttggt tcgctcgcgc
     4261 ggggccatac atcaagcgaa tgccgggaat cggctggcca ttctcagcat cgacgatgcg
     4321 gccgctggcg acaaaagtgt tcgtggctcg gccgacgcgg atgtcgatgt tggtggcctc
     4381 ggtaccctct tgcaattcta cgactgaggc tttggctgcg tcgctcgtat tgccgtagaa
     4441 agtcaccgcg tagtacatgc gctttcccga catcatgaaa ccgccttcag ttgaaccaac
     4501 gctgacgcga taacgtcccg ctgccagacc gtaaatacga taaatgccgc ggtcgtccgt
     4561 ctggctcatt tgataattcc acatcggaat gttggcctgg ttcacgttgc cggcttgatc
     4621 gaccatctgt aaattgattc gctcttcaat caccggcccg ccgtccgcgt ccgtaacgcg
     4681 gcccgtaatg acgcctccgt ggacaagctt tacatcaacg tcgtcagctt cttcacccgg
     4741 cgccagcacc agggttttac cagtgcggta catcgaaccc gagtatccgc tttgctcagg
     4801 cgctagcgtc ggagcgaccg ccgtaatctg atattgaccc gcgggcaatc ccgttaagcg
     4861 atagcgcccg gtcgcatcgg acttcgcgcg tgcggcgggc tgccgaaagg gttgatccaa
     4921 caattgagcc gccaccaaaa tgtcgggcac tcctttttcg ttcacggtga ctttgcccga
     4981 aactgtccca gttggttttg cgctcgcggg ggaagtttgc gcgtgagccg agagcggcac
     5041 gagcattagc aacccagcga gtgcaagtgc aaacgtaagc gagagtcttt ggagcggcat
     5101 ggggtctgcg tcctttgtgg gggctagagc cgtttcaggg cgtcatcatc ccaccgtctc
     5161 aagtgaacgg caagaaaaat ccggggccga aagtgttgct aggattgacg agtgtttgct
     5221 tgtagaatcg gcttcgctct tcggcaatat cgagttcgat acagatgcct cttctaaaga
     5281 tcacagacgc aagcgggcgc cagtcggagc acactttggc gccgaaactt acctgcaaca
     5341 tcgggcgcgc gcctgacaat caaatcgtcc tggacgatcc gcgcgcgtcg cgtcaccacg
     5401 cgcacatcca gccggccgac gatggttcct tcgtgatcgt cgacggcgtt tacgtcaacg
     5461 gcaagattaa tcgcagcgcg aacaagatct tcatcaacgg cgaacagaag ttcgagcacg
     5521 cgctgaagaa cggtgaccgc gtcacgatcg gcgccagcac gatcaagttc gaacagccaa
     5581 aggaagagcg caccgccgat ttaagttacg acgacaagcc gctcggccac acgcaggtgt
     5641 tgatgtcggc caaggatgtt ttgagcaccg tgctcaagca acaagccgac acgggaaaat
     5701 taccgggcgc cggccgcgac aaggtcctcg aacagttgca gcgaaaggca aacatcctcg
     5761 ccgagttgta cgagatgagc aaagcgctgg gctcaggttt cgaccttgat cggattttca
     5821 agatggccac ggacatcatc ttccgatcca cgccggcgga tcgcgtggtc gcgctgctgg
     5881 ccgacggtgt ggtgacggaa cagaacgccg acgaggcgaa actgtttccc attgccacgc
     5941 gcgcgcgtga cgaaaaactt gaggcgtacg ccaagaagat gaccatcggc cgtacgatca
     6001 cgcgcaaagt aatgaaagag cgcgtggcgc tgctgtcaca ggacgccgcc gccgaagaac
     6061 agttcgcggg cgtcgattcg attgtttcgc agggcgtgcg ctcgacgatt tgcgcgccgc
     6121 tgtttactga ggcaggcgtt cacggcgcct tgtatgccga tcgtttggat ccgttttccg
     6181 cattcaagcc cgacgacctt gagttgatca gcgcagtcgc cgcgcaaacg gcgatcgcgg
     6241 ttgagaacgt gcgcgcccac gagcgtctgg caaaggaaga agttgcccgc gcgaactaca
     6301 gccggttttt gcccgagtac gtcgtcaagc agatgctgga aaaccccgag tcattcaaac
     6361 tgggtggcat cacgcaaacc attacaatcc tgttcgccga cattcgcggc ttcacgcgca
     6421 tctctgaaca tgcagcgccg gaaaagatcg ttgatttgct caaccgctac ttctcagcga
     6481 tgacggacat tatctttgcg cacgggggaa cgctggataa gtatctcggt gatggattga
     6541 tggcgctgtt cggcgccccc acgacgactc ctaaagacgc ggcgaatgcg ttagcggcgg
     6601 cggttgccat gcagcgacgg atgatcagca ttaacgccga acttcgcgag gagggctttc
     6661 aggaaattgg gatcggtatc ggattgcaca ccggcgaggt aacggttggc tacatcggct
     6721 ctgaacggcg gtcggaatac accgcgatcg gtgatgcagt aaacacggc
//
LOCUS       DATDBY010000119         3955 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1112863, whole genome shotgun sequence.
ACCESSION   DATDBY010000119 DATDBY010000000
VERSION     DATDBY010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3955
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1112863"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="VIT19_02335"
     CDS             complement(<1..285)
                     /locus_tag="VIT19_02335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837844.1"
                     /translation="MFKRISSFISAIALLATVGLSSASAKDAEAVRVPLNIAILIQDD
                     LTSQVANEISTTKEFIRSLPQGSRVMVGYITAGRLQVRQSFTTDLNRAANS"
     gene            complement(657..1070)
                     /locus_tag="VIT19_02340"
     CDS             complement(657..1070)
                     /locus_tag="VIT19_02340"
                     /inference="COORDINATES: protein motif:HMM:NF016056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF393 domain-containing protein"
                     /protein_id="HEY5837845.1"
                     /translation="MIPETEPANKVEVYTDGQCNLCRWSRERVEPLDRDRRLEWLDYN
                     QPEILKRAAPHTREEMADQMHVRPPDGRWYKGYFAWIEIVRVLPRWKWLAPVMGVWPF
                     TKLGPIFYHWLAARRYTLFGVPPPCDESGVCQLHK"
     gene            1174..2049
                     /locus_tag="VIT19_02345"
     CDS             1174..2049
                     /locus_tag="VIT19_02345"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5837846.1"
                     /translation="MLKISGLTKTYPSGVQALRGISLDIPSGMFGLLGPNGAGKTTLM
                     KILATLLEPDSGMAVMNGIDFVSDQPSARRMLGYLPQEFGFYPTLTAAQTLDYFAKLK
                     GVWDKKERRELIGALLERVNLSAERKQKVGGFSGGMRQRLGIAQALIGQPQLLIVDEP
                     TAGLDPQERMRFHNLLSETVREGTVVMLSTHIVSDVSNLCDHMAIIRKGEILASCVPQ
                     QAIEGLRETVWEGTVSREAVAGVNARCKVISSQIFGGLPRLRVISKGKRPGEEFTPAI
                     PTLEDYYLNLVNQPT"
     gene            2065..3828
                     /locus_tag="VIT19_02350"
     CDS             2065..3828
                     /locus_tag="VIT19_02350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5837847.1"
                     /translation="MRNPLHTPFAAIFQNELILNSKRVAPYAMMLLFTANAVLWWIQP
                     AIKYGWATNSDWYIVRGLLAFSFLLGMPIFNSVIMGDPVIRDFRLGVDPLIFSKPVSR
                     AHYLLGKFFGNFFVLVCCQAVFPVTQLLLQAFPIPKMIVLPVRVFPYFKHFFFFLVIT
                     HLFLAALYFAAGTVTRNSKIVYGLAVCFYPIIIAYGLFVLRPLPFRWRFMLDPLLLGA
                     SLPGNGFMHSAEFLNQYSVPYTADMISNRVVMIGLAAVCLLVLYFRFSIVERTSKRAF
                     SVFNLAMPTESIQFDRETAASARVFTSEQIVSSLKGTQSVLLPKVATANQGLGANLRK
                     LGAATTLELFLLRAEKSLLVLIPLGVLISFLSLPFSTGASDVSPSAGFAGSSARGTLI
                     FLLGVIVFYAGEAMHRDREVKVEPGLWSTPAPDSVFLLSKFLATIVLAIGLLLLIGLT
                     AILTQWLRGQLPIDLGVYLLTYGLIVIPSLIFIAATSIVLNVLLREKYVTYVVIIAAS
                     AGLFYLYSQGFNNWLYNPMLYGLWTEADLGSWGGLSRLIGLRAYGLAIAGLSLVLAHV
                     FFARRSTRRWMTSRRRSTQSS"
BASE COUNT          846 a         1058 c         1062 g          989 t
ORIGIN      
        1 cgaattcgcg gcgcgattca agtcggtagt gaatgactgc cgcacctgca aacgaccggc
       61 ggtgatataa ccaaccatca cgcgcgatcc ctgcggaagg gaacgaatga actctttggt
      121 cgtgctaatt tcattcgcca cctgcgacgt gagatcatcc tgaatgagga tcgcgatatt
      181 caacggcaca cgcaccgctt cggcatcttt tgcgctcgca ctcgataaac caacagttgc
      241 taataacgct atcgcagaaa tgaatgagga aattctttta aacataatct tacctttcaa
      301 actgacgaac acttcgccag aaatcgttgt gaactgagtt gtctgggttg agtctaagat
      361 gcgcgctaaa gcgcgatggt tggcaggaaa tcagtgggca gtgggccgtg cgcagtgggc
      421 agtgagtgtg cggagcgcac gcaagcataa agcctggggt gcagcgagcg tagcgagcaa
      481 accccaggat cgcgtggtca aaaaatcaag agcccgcgga gcgggcgaca gatcattttc
      541 aagacgtctg ccgcccgctt cgcgggctca ccattactat gaacgttacc cggggctcac
      601 gccccgggct ttatgcttgc gtgcgctctg cgcactcact gctcactgct cactgctcac
      661 ttgtgcaatt ggcacacgcc gctttcatca cacggcggtg gaacgccgaa cagagtgtag
      721 cggcgcgcag cgagccagtg gtagaagatg ggaccaagtt tcgtgaacgg ccaaacgccc
      781 atgacgggag cgagccactt ccaacgcggc agcacgcgaa cgatttcgat ccaggcgaag
      841 tagcctttgt accaacgccc atccggtggt cgaacgtgca tctgatcggc catctcttct
      901 cgcgtgtgcg gcgcagcacg tttcagaatc tcgggctggt tgtaatccag ccattccagc
      961 cgtcgatcgc gatcgagtgg ctcaacacgt tcgcgcgacc agcggcaaag gttgcattgg
     1021 ccgtcggtgt aaacttcgac cttgtttgcc ggctctgttt cgggaatcat gtgtggccag
     1081 gacgatacaa tagccacgca acggcggcaa aggaacctgc tggaacatgc ggacgaaaat
     1141 cttgtctaag ctgatcatct cgctgaacag ctaatgctga aaatttccgg cttaaccaag
     1201 acctatccaa gtggagtaca ggctttaagg ggaatctctc tcgacattcc ttccggaatg
     1261 tttgggctgt tgggaccaaa cggcgcaggc aagacaactc tcatgaagat cctggccaca
     1321 ctgctggagc cggattcggg catggctgtg atgaacggta ttgatttcgt aagcgaccag
     1381 cccagcgcgc gtcggatgct tggttacttg ccgcaggagt ttggcttcta cccgacgctg
     1441 actgccgcac agacgctcga ttactttgcg aagctcaaag gcgtttggga caagaaagaa
     1501 cgccgggagt taatcggcgc gttactcgaa agagtcaatc tctccgcgga acgaaaacaa
     1561 aaagtgggcg gattttcggg cggcatgcga caacgtctcg gcatagccca ggctctcatc
     1621 ggtcaaccgc agttgctgat tgtcgatgaa cccacggccg gactcgatcc gcaagagcgc
     1681 atgcgtttcc ataatctgct ttctgaaacg gtccgcgagg ggacggtggt gatgctctcg
     1741 actcacattg tttccgacgt ttcgaatctg tgcgatcaca tggccatcat tcggaaaggt
     1801 gagatcctcg cctcctgtgt cccgcagcag gcaatagaag gacttagaga aaccgtttgg
     1861 gaaggaacgg tgtcgcgtga agcggtggcg ggcgttaatg ctcgctgcaa agtgatctct
     1921 tcgcagatct ttggcggatt accgcggctg cgagtgatct caaaagggaa acggccgggc
     1981 gaggagttta cgccggcgat tccaactctc gaagactact atctgaacct cgtcaatcaa
     2041 ccaacgtgag taaagagtag tcagatgaga aaccctctcc atactccgtt cgccgcaatc
     2101 tttcaaaacg aactgatcct gaattcgaag cgggtcgcgc cttacgcgat gatgcttttg
     2161 ttcaccgcca atgcggttct gtggtggatc cagccggcga tcaaatacgg ctgggccaca
     2221 aatagcgact ggtacattgt caggggtctg ctggctttct ctttcctgtt gggaatgcca
     2281 atcttcaact cagtcattat gggagaccct gtgattaggg acttccgact gggtgttgac
     2341 ccgctcatct tttcgaagcc cgtcagtcgc gcccattacc ttctcggaaa attcttcggc
     2401 aatttctttg tgcttgtgtg ctgtcaggct gtgttcccgg ttacacaact tttgctgcag
     2461 gcatttccta tcccaaagat gattgtcctg ccggttcgag tgttccctta tttcaaacac
     2521 ttcttttttt tcctggtcat cacgcacctg tttctggctg ccttgtactt tgccgccgga
     2581 actgtcacgc gcaacagtaa aatcgtctac ggattggccg tctgctttta tccgatcatc
     2641 atcgcctatg ggcttttcgt actgaggccg ctgccatttc gctggcgatt catgctcgat
     2701 cctctgctgc tcggcgccag tcttccaggc aacggtttta tgcacagcgc agagtttctc
     2761 aatcagtaca gtgtgcctta caccgcggac atgatttcca accgggtggt aatgatcggc
     2821 cttgcggcgg tttgtctgct ggtcctttac tttcgatttt caatcgtcga gcggacttcg
     2881 aaacgcgcat tctcggtatt caatcttgcg atgcccaccg aaagtattca gttcgaccgg
     2941 gaaactgccg caagtgcgcg cgtcttcact tctgagcaaa ttgtttcctc gctcaagggg
     3001 acgcaaagtg tgctcctgcc caaagtcgcc acggcgaatc agggcttagg cgcaaacctc
     3061 agaaaactag gagcggcaac tacgctcgag ttgtttttgc ttcgcgctga aaagagttta
     3121 ttggtcttga taccgctcgg cgttctgatt tcatttctgt cacttccttt ttccacgggc
     3181 gcgtctgacg tttcgccgtc cgcaggcttt gccggcagtt cggcccgggg cacgttgata
     3241 ttcttgctgg gtgtgattgt gttttacgca ggcgaggcga tgcatcgcga tcgggaagtg
     3301 aaagttgaac ctgggttgtg gagtaccccg gctcctgact ctgtcttcct gctatcgaag
     3361 ttcctggcga ccattgtctt ggccatcggg ctgctgcttt tgattggact caccgcaata
     3421 ctcacccaat ggttaagagg gcaactgccg atcgatctcg gcgtctacct gctcacgtac
     3481 ggattgattg taattcccag cctgatcttt atcgcagcga ccagcattgt gttgaacgtt
     3541 ttgttacgtg aaaagtatgt gacttacgtg gtcattattg ccgccagcgc gggactgttt
     3601 tatctgtaca gtcaggggtt caacaattgg ctttacaatc caatgcttta cggcctgtgg
     3661 acagaggcgg acttaggttc ctggggcgga ctttcgcgcc ttatcggact gagagcctac
     3721 ggtctggcaa tcgcgggcct gagtcttgtt ctggcgcacg tgttctttgc tcgcaggtca
     3781 acacgacgat ggatgaccag ccgtcgtcgt tctacccaat catcctaaat tgctaacttg
     3841 cctttcgcct ttcggctcgg ataaattaca cgtcaatcca cagtcacatc ctgtcttttc
     3901 attccgaaat gaagctgggg atgtctcgct ggaactagat cctgaaagga ttaat
//
LOCUS       DATDBY010000120        10462 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1118350, whole genome shotgun sequence.
ACCESSION   DATDBY010000120 DATDBY010000000
VERSION     DATDBY010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 10462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10462
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1118350"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..824)
                     /locus_tag="VIT19_02355"
     CDS             complement(<1..824)
                     /locus_tag="VIT19_02355"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEY5837848.1"
                     /translation="MAELVVRYPDRTAEHFPLNRLRITIGRSARNDLCIPDPFASRVH
                     AEVRNEGDEYYLQDLGSANGTLYNGAIVDAAIPLTRGGRIQIGETEIVFNDGPYPLSS
                     GSTMITEQSTSVPEATIALSSADRTTSGLFQQIEGALSRSHDSAAHEKFEQKTDLLAL
                     ISKVGVALLASVTLNETLEQIVTLVFESVPGDRCMIMMRDQDNPELKVAVARLRDRQG
                     DVGEIRISRSVIDEVVNNGKSVLTSDAQSDPRFMGGTVVLQGVRSVLAVPLGVGENV"
     gene            complement(1026..1553)
                     /locus_tag="VIT19_02360"
     CDS             complement(1026..1553)
                     /locus_tag="VIT19_02360"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEY5837849.1"
                     /translation="MPAKIESGKASRPTSKRLEHIQVRYRAPFALRCGAILIDYIMLV
                     LIMTFSTMVARMMGGGARLAGGTAEKVGIFFTLVAAVLDLGVLAGLTGKTLGKWTTGL
                     RLESTHGSVPGIGWALLRHFVGYPVSFFLFGIGFLMAIVNPTGRALHDLIAGTVVIRE
                     YGSTTSQTRRPRPGK"
     gene            complement(1653..3257)
                     /locus_tag="VIT19_02365"
     CDS             complement(1653..3257)
                     /locus_tag="VIT19_02365"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5837850.1"
                     /translation="MPACKECSADVALDENFCGSCGAPVKTDEPLAESALQPDLAESI
                     GVGGSTLVPSAEQSDAGTGEVSEPDIGATSRSTEGSSRRSKPKALAGGKVLNHRYEIV
                     RRIGGGGMGAVYLAKDRNLGDAPRAVKEMIESHIDETQHEKAIADFKRESLLLTELEH
                     PSIPTVYDYFYDDNSERFYLVMKFIPGADLASRLRATPEGRIDEPTVTDWGIQVADVL
                     HYLHTRPQSIIYRDLKPANLMIDSNNHRIMLIDFGIARWVNKKEKGVTAVGTMGYAPP
                     ELFSGRADPRVDIYSLGATMFHLLTGADPQDNPLLIFDFTKNPRPRQINPALSSEIER
                     ILLRTVEYKPEHRYQSGAELRDSLAHHLEKLRSGQVSYGAPAYQLGGETMAVSSVFCG
                     FCGGRIAADDVFCAHCGSKQPLAGTDSASLSARTTAKLVVAGTTELDASFLIQKDTNL
                     VGRTDPLSNIFPEIDLSRFDPNTKVSRRHARIWREGGAFMVEDLGSVNGTVINDIIHL
                     EPRQPRALDSGDRLRVGETTLHFLVG"
     gene            complement(3339..3905)
                     /locus_tag="VIT19_02370"
     CDS             complement(3339..3905)
                     /locus_tag="VIT19_02370"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEY5837851.1"
                     /translation="MITCERCGTQNLAGSRYCDECGAALWLAGRSGDRANPQANGKEG
                     SGNKEVSLTVARPAKPPASGLVAQQSAGAVAVAGKNATLTIERGKSAGKQFPIGPEGS
                     DIGRWDADGGVFPDVDLDTDDPEAKVSRRHARISCENGQYVIEDLGSTNGTFVNRGRR
                     LKPSERHPVNDGDEIIVGKTFLRFHLAK"
     gene            4264..5724
                     /locus_tag="VIT19_02375"
     CDS             4264..5724
                     /locus_tag="VIT19_02375"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY5837852.1"
                     /translation="MALSRKKKIIIAVSAVAVLGIVVIISVLATRTEQPEVTTVNVNV
                     RPELRSTVTASGEVRPIRYIKLTSEVPGRILEIYVNPGDQVTKGQALVRVDPTQLQAS
                     QEAQWAATQASLNDVQNARTAVSAAQQGLVVAEAGVSQARQSAATAHIDLRAADRELK
                     RATNLVESNVMSRAEYDAVRDRYDQAKAKVDAANIAVREAQERANSQRVAVKEAQTGV
                     RSSEMRANQQQAILRGSSSQREKATQFSPLTGVVADIPTRVGEFAVSQLSSTPLMTIA
                     DMSTINVEVNVDETEIANVEVGQEAKVKVDALGEKEMKGIVTQKNPLAIAKSDTQGGL
                     SNRVNVQEAKEFKVTLEIRDLPDEERNKLRPGMSATATVTTKTKQNVVAVPLQAIVEK
                     APPTPAPTIASSAPPASGEKPKELKGVYTIDKSNKVKFVEVTTGITGESDIEITGGLS
                     SGAEVVTGPSRILKTLKDGTVVKRQTRTPGANANSN"
     gene            5768..6526
                     /locus_tag="VIT19_02380"
     CDS             5768..6526
                     /locus_tag="VIT19_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5837853.1"
                     /translation="MAEATLTTSSATLVEPEPPSQVGQSTSLIAMRNIWKTYDMGAEK
                     VHALHGVTFDVRRGEYLAITGPSGSGKSTLMNLIGCLDTPSQGEYWLNSKNVSEMDDD
                     ELARIRNQEVGFVFQTFNLLARATALHNVELPLIYGGIPGAKRKEMATHALGAVDLTD
                     RMMHRPNELSGGQRQRVAIARALVNHPSILLADEPTGALDTATSYEIMNLFERLHEEG
                     NTIILVTHEHDIAARAHRIISIRDGLIEKDEQVR"
     gene            6537..7901
                     /locus_tag="VIT19_02385"
     CDS             6537..7901
                     /locus_tag="VIT19_02385"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5837854.1"
                     /translation="MPQSSEPSPERAALVFGKRLSVPAQVRSSPVFRVAALWEAFLVA
                     AASLRQNKLRTALTLVGIIVGVTAVISVVTIIKGLDQTVSQTFNSQGSTVFTISKRPQ
                     VITSREEFVRYNKRKPVTPDDANAIARLCTACWRTGVAVNSIKPAKRGNETFETMQVR
                     GIEPVAMFDIDGVSIDSGRFWTEGEGASGGDTCVVGSDVVTNLFPNETADRVLGQDIW
                     VGGHRYIIIGVLQPLGKIFGISRDTRVYIPFATYKKRFGVDFSGAAYAPQGSLVVFVQ
                     TESPAQLEAAEDQVRAIMRNRRGKSFKDEDDGFALETQDVFLDLYSKATSNIYLVTIG
                     VSAISLVVGGIVVMNIMLVSVTERTKEIGIRKAVGARRKDILTQFLIEAVTVTAIGGT
                     MGVLTGFGAAWLIALLIGFPLLISVWSAVLGVSVSSIVGVVSGLWPAWRASRLDPIEA
                     LRAE"
     gene            7904..9145
                     /locus_tag="VIT19_02390"
     CDS             7904..9145
                     /locus_tag="VIT19_02390"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5837855.1"
                     /translation="MNIGDVKESAWMALDTVRANKLRSALTILGVSVGVVTVVFMVGI
                     IQGLNKAFADQIESLGSNTIWATKFDPSIGHQPTQEEIHRKELTIEDADTIRNEATSV
                     AGVAPFYRKVAETVQYRGNQSDTPILIGATPYHEYTVSSYVDRGRFISELDVDRRENV
                     CVLGIDVVKALFEYEDPLDKEIKLAGHVFKVVGVMEPLGSILGQSRDNSVFIPITTFG
                     KYYPEFDFPEIISAIIVRPVSRAHVKTAIDEMTDILRRRRGVKPGQPSNFGISSQDAL
                     LDVYNQLTGATYLVLTAISFVALMIGGIGVMNIMLVSVTERTKEIGLRKAVGATRLNI
                     LSQFLIEAVVLTAIGGLLGLLVGEVASLLVNRYSPLPAYVPAWAIVVGIGISASVGIV
                     FGLWPAWKAARLDPIESLRYE"
     gene            9330..>10462
                     /locus_tag="VIT19_02395"
     CDS             9330..>10462
                     /locus_tag="VIT19_02395"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5837856.1"
                     /translation="MKLIEILKVAIAAIWVHKLRSALTLLGMIVGVTAFVTVVSLIQG
                     FNVYIDEKIAGIGAKSFSVQRFNPFEDFKDTDTIASAQRRNKELTLDDYDYLKEKATL
                     IGKIGAKARGSPTEVKRGDQVLQDTFVSGATANTADIDNRNIEYGRFFADVEAEGGAR
                     VAYIGADIASKLFPAGNPIGGEIYIRGLPYRVVGVEAVKGTVFGIPQDGFIVIPLKTY
                     QLDFGPLVRQRSLYFTATAQSDEVFSDAVEEARFLMRARRHLEPKEKDSFGIVTPDAI
                     TGLRDRLFGTIFIVAMLVPGIALIVGAIVIMNIMLVSVTERTKEIGIRKALGARKADI
                     LKQFLFEAVTLATMGGAVGVFLAWVIGKLVTAAIFPTYLSLAA"
BASE COUNT         2236 a         3084 c         3031 g         2111 t
ORIGIN      
        1 acgttctcgc cgacgcccaa cggcaccgcg agcaccgaac gcacgccctg caggacgact
       61 gtgccgccca taaagcgcgg atccgactgc gcgtcggaag tcagcacgga tttaccgttg
      121 ttgacgactt catcgatgac tgagcggctg atgcgaattt cgccgacatc gccctgtcga
      181 tcacgcaggc gcgccaccgc aaccttcaac tctgggttgt cctgatcgcg catcatgatc
      241 atgcaacgat ctccgggcac ggattcgaag acgagcgtca cgatctgctc gagcgtttcg
      301 ttcaacgtta ccgaggcgag cagcgccacg ccgactttgc tgattaacgc gagcaggtca
      361 gtcttctgct cgaacttctc gtgcgcggct gaatcgtgcg aacgcgatag cgcaccttcg
      421 atttgctgaa atagccctga ggtagttcga tctgcggacg acagcgcaat ggtggcttcg
      481 ggcacggacg tgctctgctc ggtgatcatg gtcgagccgc tgctgagagg atacggcccg
      541 tcgttaaaga cgatttcggt ctcgccgatc tgaatgcgtc cgccgcgcgt caggggaata
      601 gccgcgtcga caatcgcgcc gttgtagagc gtgccgttcg ccgaacccaa atcctgaagg
      661 tagtactcgt cgccttcatt gcgcacttcc gcgtggacgc gcgacgcaaa cggatcggga
      721 atgcacagat cgttgcgcgc ggagcggccg atcgtgatgc gcagccggtt cagcggaaaa
      781 tgctccgccg tccgatcggg atatctgaca actaactcag ccatgaatct taagaatcaa
      841 gcttgcctcc ctctcccttt gggagagggc tggggtgagg gtttactgcg caaccagcta
      901 ttccttttcc tgtttttcct tggcgagggc agcctcgcga aggaggaaaa tcaaaacatc
      961 gtgtccgcta agcttcgcac cctcacccta accctctccc aaagtgagag gggaaaacca
     1021 acgtatcact tgcccggacg cgggcgccgc gtctgactcg tcgtcgaccc gtactcgcga
     1081 atcaccaccg tgcccgctat cagatcatgc agcgcgcgcc cggtaggatt tacgatcgcc
     1141 atcaagaaac cgattccgaa cagaaaaaaa gaaacaggat aaccaacgaa gtggcgcaac
     1201 agcgcccagc ctatgcccgg cacgctgccg tgggtgctct ccagccgcag acccgtcgtc
     1261 cacttgccca gagtctttcc ggtcagccct gccagaacgc ccaaatctaa cacagccgcc
     1321 acaagcgtaa agaagattcc aaccttttcc gccgtgcctc ccgccaaacg tgccccgccg
     1381 cccatcatgc gcgcgaccat cgtgctgaaa gtcatgatca gaaccagcat gatgtagtcg
     1441 atcagaatcg cgccgcaacg caaagcgaac ggcgcgcgat accgcacttg aatgtgctcc
     1501 agacgcttcg acgtcgggcg cgaggctttc cccgattcga ttttagccgg cactgtcgct
     1561 tgcattgtgt tcgttgtgtc tgaagcccga ccgtaaggga gggcaagtat cccatggttg
     1621 ctattcccta cggtcgggct tctgacatga actcatccga ccaggaagtg caaagtggtc
     1681 tcgcccacgc ggaggcgatc gccgctgtcg agcgcgcgcg gctgccgcgg ttcaaggtgg
     1741 ataatatcat tgatgacggt gccgttgacc gaaccgaggt cttcgaccat gaaagcgccg
     1801 ccttccctcc agatgcgcgc gtggcgccgc gaaactttcg tgttcggatc gaatcgcgac
     1861 aagtcgattt ccggaaagat gttcgagagg ggatcggtgc ggccgacgag attggtgtcc
     1921 ttttgaatta gaaaagatgc gtccagttca gtcgtgccgg cgactacaag tttcgcggtc
     1981 gtgcgcgcgg acagcgatgc tgaatcggta cccgcgagtg gctgctttga tccgcagtga
     2041 gcgcagaaca cgtcatccgc tgcaatccgc ccaccgcaga agccgcagaa cacgctcgag
     2101 acggccattg tctcgccgcc caactgatat gcgggcgcgc catagctgac ctggcccgaa
     2161 cgcaacttct ccaggtgatg cgccaacgaa tcgcgtagtt cagcgccaga ctgatagcgg
     2221 tgctccggct tgtattcgac ggtgcgcagc aggatgcgct cgatctcgct tgagagcgcc
     2281 ggattgattt gccgcggccg cgggttcttc gtgaaatcga agatcagcag cggattgtcc
     2341 tgtgggtcgg cgccagtcag caggtgaaac atcgtcgcgc ccagactgta gatatcgacc
     2401 cgcggatcgg cgcggccgct gaacaactcc ggtggcgcgt aacccatcgt gccaaccgcc
     2461 gtcacgccct tctctttctt attgacccag cgcgcgatac cgaaatcgat cagcatgatg
     2521 cgatggttgt tgctgtcaat catcaaattc gccggcttta gatcgcgata gatgattgac
     2581 tgcgggcgcg tgtgcaggta atgcaaaacg tcagcgactt gaattcccca gtcggtgacc
     2641 gttggttcgt cgattcggcc ctccggcgtc gcacgcagac gtgaagccag gtcggcgccg
     2701 gggataaact tcatcaccag gtagaaacgc tcagaattgt cgtcgtagaa ataatcgtaa
     2761 accgtgggaa tcgatggatg ttcgagttcc gtcagcagca atgactcgcg cttaaagtcg
     2821 gcgatcgctt tttcgtgctg ggtctcgtcg atgtgggact cgatcatctc tttgactgcg
     2881 cgcggcgcgt cgccaagatt gcgatctttc gcgaggtaaa ccgcgcccat gccgcccccg
     2941 ccgatgcgcc gcacgatttc gtaacgatga ttgagaactt tcccgccggc gagtgccttt
     3001 ggttttgatc tgcgagaaga accctcggtg ctgcgggaag tggcgccgat gtcaggttcg
     3061 gaaacttctc cggtgcccgc gtcggattgc tccgccgacg ggactaaggt cgagccgccc
     3121 acgccgatac tctccgccag atctggctgg agcgcgctct cagccagcgg ctcatcggtc
     3181 tttaccggcg cgccgcaact gccgcaaaag ttctcgtcga gcgctacatc ggcgctgcat
     3241 tccttacaag caggcatggt tgaattcaaa aactacggta cgcacgcgtc tcgcgtgctt
     3301 cttcgtgatg cacgccagag gcgtgcgtac caaacgcgtc atttggcaag atgaaatctg
     3361 agaaaagtct tgcccacgat gatttcgtcg ccatcattca ccgggtggcg ttcactcggt
     3421 ttcagtcgcc gcccccggtt cacaaacgtg ccattcgttg atccgagatc ctcaatgacg
     3481 tactggccgt tttcgcagga aatccgcgcg tgacgacgcg aaacttttgc ttcgggatcg
     3541 tccgtgtcca aatcaacgtc gggaaatacg ccgccgtcgg cgtcccaacg gccgatgtcc
     3601 gaaccttcag ggccaatcgg gaattgcttg ccggcggact tgccgcgttc gatcgtgagt
     3661 gtcgcgttct ttccagctac tgcgaccgcc cccgcgctct gttgggcaac caggccggag
     3721 gccggcggct tcgccgggcg cgcgacggtc agggaaactt ccttgttgcc gctaccttcc
     3781 ttcccgttgg cttgcggatt tgcacgatcg ccggaacggc cggcgagcca aagcgcagcc
     3841 ccgcattcat cgcagtaacg cgaccccgcc aggttctgtg taccgcatct ttcgcaggtg
     3901 atcattgcaa aaacacgcgc cggcctgagt tggggaacaa ccaaagcccg cgcgagaata
     3961 tcttatcgcg aaacagttgg cacggccaac gcgttgtggc acgcgcatct tgcgcgtgag
     4021 ttcacgggcg ggacgcccgt gccacctgcc aaaccaacgc gttgccagcg gaatatacgc
     4081 ttttcaccgt ctaagagaaa cgccacgcgc gcgcttcgca ttaacatcgg ttataatccc
     4141 gacttctcgc gaattcctga aaccagccac cggatttcgt cgtagaaaca actctaacgc
     4201 ggaactgtgc tcaaccgccc ggcgtccagg taactaccga ctgattattt aaggaattaa
     4261 caaatggccc tcagcagaaa gaaaaaaatc attatcgcgg tgtccgccgt tgcggtgctc
     4321 gggatcgtcg tcatcatcag cgtgctcgcg acgcgcacgg aacagcccga agtcacgacg
     4381 gttaacgtca acgtgcgacc ggaactgcgc tcgacagtca cggcgtccgg cgaagtgcgt
     4441 ccgattcgct atatcaagct caccagtgaa gttcccggcc gcatcctcga aatctacgta
     4501 aacccgggcg accaggtgac caagggccag gcgctggtgc gcgtcgatcc gacgcagttg
     4561 caggccagcc aggaagctca atgggccgcg acgcaggcgt cactcaacga cgtgcagaat
     4621 gcccgtacgg cagtctcagc agcgcagcag ggactggtag tagccgaagc cggtgtgtcg
     4681 caggcaaggc agagtgcggc gaccgcgcat atcgacctca gagcagccga ccgcgagttg
     4741 aaacgggcga cgaacctggt cgaatcgaac gtgatgtcac gcgctgaata cgatgcggtg
     4801 cgcgatcgtt acgatcaggc aaaagcgaaa gttgacgcgg cgaacattgc cgtccgagaa
     4861 gcgcaggaac gtgccaattc gcagcgcgtc gcggtgaaag aagcccagac aggcgtgcgc
     4921 tcgagcgaga tgcgcgcgaa ccagcagcag gcaattctcc gtggctcgtc cagccagcgc
     4981 gaaaaggcga ctcagttttc gccgttgacc ggcgtggtcg ctgacattcc gacgcgtgtc
     5041 ggtgaattcg cggtatcgca actttcttcg acaccgctta tgacgattgc cgatatgtcc
     5101 accatcaacg ttgaggtcaa cgtcgacgaa accgaaattg cgaatgtgga agtcggtcag
     5161 gaagccaaag tgaaggttga cgcgctgggc gagaaggaaa tgaaaggcat cgtcacgcaa
     5221 aagaacccgc tggcaatcgc gaagtccgat acgcagggcg gtctttcgaa tcgcgtgaac
     5281 gtgcaggaag cgaaggagtt caaagtcacg ctcgagattc gcgatctgcc ggacgaagaa
     5341 cgtaacaagc tgcgtccggg catgagcgcc acggccacag tcacgaccaa gacgaagcaa
     5401 aatgtggtcg cagttcctct tcaggcaatc gtcgagaagg cgccgccgac gcccgcgccc
     5461 actatcgcga gcagcgcgcc gccggcttcg ggtgaaaagc cgaaggaact gaaaggcgtt
     5521 tacaccatcg acaagtcgaa caaggtgaag ttcgtcgaag tgaccaccgg catcaccggc
     5581 gagtctgaca ttgagatcac cggcgggttg tcatcaggcg cagaagtcgt cacgggccca
     5641 agccgcattc tgaaaacact gaaagacggg accgtggtga agcgacaaac acgcacaccc
     5701 ggcgcgaacg cgaacagtaa ctagaagccg cctctccctt tgggagggcg cgtaagaacc
     5761 gatccaaatg gccgaagcca cgctaaccac atcatccgcg accctggtag agccagagcc
     5821 gccttcgcag gtcggccaaa gcacgtcgct gatcgcgatg cgtaacatct ggaagactta
     5881 cgacatgggc gctgagaagg tgcacgcgct gcatggcgtg acattcgatg tgcgacgcgg
     5941 cgagtacctc gcgatcaccg gcccgtccgg ctcaggcaag tcaacgctga tgaatctgat
     6001 cggatgtctc gacacgccat cgcagggcga gtactggcta aacagcaaga acgtttctga
     6061 gatggatgac gatgaactcg cgcgcattcg caatcaggaa gtcgggttcg tctttcaaac
     6121 ttttaatctg ctggcgcggg cgacagcttt gcacaacgtc gagctgcctt tgatttacgg
     6181 tggcattccc ggcgccaaac gtaaggagat ggccacgcac gcgctcggcg ccgtcgatct
     6241 caccgatcgc atgatgcacc ggccgaatga actctccggc ggtcagcgcc agcgcgtggc
     6301 aattgcgcgc gcgctcgtca atcacccttc gattcttctc gctgacgaac cgaccggtgc
     6361 gctcgacacg gccaccagct acgaaatcat gaacctcttc gagagacttc acgaagaagg
     6421 caacacgatc attctcgtca cgcacgaaca cgacatcgcc gcgcgcgccc accgcatcat
     6481 ctcaattcgc gacgggctga tcgaaaaaga cgagcaagtt aggtagagct gctgccatgc
     6541 cccagagcag cgaaccatct cccgagcgtg ctgcactggt atttggtaag cgactgtccg
     6601 tacccgccca agtccgttcg tcccccgtgt tccgcgtcgc cgccctctgg gaagccttcc
     6661 tggttgccgc tgccagtctt cgtcagaaca agttacgcac cgcgctgacg ctggtcggca
     6721 tcattgtcgg cgtcacggcg gtcatctcag tcgtcacgat catcaaaggc ctcgaccaaa
     6781 ccgtctcgca gactttcaat tcacagggct cgaccgtctt caccatctca aagcgtccgc
     6841 aggtcattac ctcgcgcgaa gagttcgtca gatacaacaa gcgcaaaccc gttacgccgg
     6901 acgatgcgaa tgcgatcgcg cggctctgca cggcgtgctg gcgcacgggt gtcgcggtga
     6961 attcgatcaa gcctgccaag cgtggcaacg agacttttga aaccatgcag gttcgcggga
     7021 tcgagcccgt cgcgatgttc gacatcgacg gcgtgtcgat cgattccggc cgattctgga
     7081 ccgaaggcga aggcgcctct ggcggggaca cctgcgtcgt cggctcggac gtggtgacga
     7141 atctttttcc gaacgaaacg gccgatcggg tgctcggcca ggacatctgg gtcggcggcc
     7201 atcgttacat catcatcggc gtgctccagc cgctgggaaa gatcttcggc atctcgcgcg
     7261 acacgcgcgt ctacattccg ttcgcgacgt acaagaaacg cttcggcgtt gatttcagcg
     7321 gcgccgcgta cgcgccgcag ggttcgctgg ttgtgtttgt ccaaaccgaa tcaccggcgc
     7381 aactggaggc ggcggaagat caagtccgcg ccattatgcg taaccgccgt ggcaagagtt
     7441 tcaaggatga ggacgacggt ttcgcgctcg aaacgcaaga cgtgtttctg gatctttatt
     7501 cgaaagccac ctcgaacatt tatctcgtga cgatcggcgt ctcggcgatt tcgctcgtgg
     7561 tgggcggcat cgtcgtgatg aacatcatgc tggtgtccgt taccgagcgc accaaagaaa
     7621 tcggcatccg caaagccgtg ggcgcgcggc gaaaggacat cctgacgcag tttctcatcg
     7681 aagccgtaac cgtcacggcg atcggcggaa cgatgggcgt gctgactgga ttcggcgcgg
     7741 cctggctgat tgccctgctg atcggctttc cgcttttgat cagcgtctgg tcagccgtgc
     7801 tgggagtcag cgtctcgtcg attgtgggcg tggtcagcgg cctgtggccg gcgtggcgtg
     7861 cgtcgcgact cgatccgatt gaagcgctaa gggcggaatg aagatgaaca taggcgacgt
     7921 aaaagaatcc gcctggatgg cgctcgacac agtgcgcgct aacaagctgc gctctgcgct
     7981 gacgattctc ggcgtcagcg ttggcgtcgt aaccgtcgtg ttcatggtag gaataattca
     8041 ggggttgaac aaagcattcg ccgatcaaat cgagtcgctc ggctcaaaca ccatctgggc
     8101 gacgaagttc gacccgagca ttgggcatca accgactcag gaagaaatcc atcgcaaaga
     8161 gttgacgatt gaagatgcgg acaccattcg caacgaagcc acttcagtcg ccggtgtggc
     8221 tccgttttat cgcaaagtag cagagacagt tcagtaccgc ggtaatcaaa gcgacactcc
     8281 gatactaatc ggcgcgacgc cgtatcacga atacaccgtt tccagttacg tagaccgcgg
     8341 tcgcttcatt tcagagttgg acgttgaccg gcgcgaaaat gtctgcgtgc tgggaattga
     8401 tgtggtgaaa gctttgttcg agtacgagga cccgctcgac aaggaaatta agcttgcggg
     8461 tcacgtattc aaagtagtcg gcgtgatgga gccgctcggc agcatcctcg gccaatcgcg
     8521 cgacaactca gtctttattc cgatcacgac gtttgggaag tactatccgg agttcgactt
     8581 tcccgaaatc atctcagcca tcattgtgcg gccggtttcg cgcgcgcacg ttaagacagc
     8641 tatcgacgag atgaccgaca tcctgcgccg gcgccgcggc gttaagccgg gccagccaag
     8701 caacttcggc atctcttcgc aagacgcgct gctggatgtt tacaaccagc tcaccggcgc
     8761 gacgtatctc gtgctgacgg cgatttcgtt cgtggcactc atgattggcg gtatcggtgt
     8821 gatgaacatc atgctggtgt cagtcaccga acgcacgaag gagatcggct tacggaaggc
     8881 cgtgggcgct acgcggctga acatcctttc gcagttcttg attgaagccg tcgtgctgac
     8941 ggccatcggc ggcttgcttg ggctgctggt tggtgaagta gcaagcctcc tcgtcaatag
     9001 atactcgccg ctgccggcat acgtgcctgc ctgggcgatt gtggtcggga taggcatctc
     9061 ggccagcgtc ggtatcgtgt tcggcctctg gcccgcatgg aaagcagcac ggctggatcc
     9121 aattgaatct ctaagatacg aataagccgt gctttgttct ttgtagtttg tactttgtgc
     9181 ttagtacttt gtactttgta ctttgatgtc tattcaacgg accgagtgat tgtgccagct
     9241 aaccaagcga gctaagtaca aagcacgaag tacaaagtac cgtccttcaa acagtaacca
     9301 attcccctct ctggacgtat tatcgagcag tgaagctcat cgaaatcctg aaagtcgcga
     9361 tcgccgcgat ttgggtgcac aaactgcgtt cagcgctgac tttgctcggc atgattgtcg
     9421 gggtgacggc gttcgtaacg gtggtttcgc tgatccaggg ttttaacgtc tacatcgacg
     9481 aaaagattgc cggcatcggc gcaaagtcgt tttcggtcca gcgcttcaat ccgttcgaag
     9541 atttcaaaga caccgacacg atcgcctcag cgcaacgtcg caacaaagag ctgacgctcg
     9601 atgactacga ttacctgaaa gagaaagcga cgctgatcgg caagatcggc gcgaaggcac
     9661 gcggcagtcc caccgaggtt aaacgcggag atcaggttct gcaggacact tttgtcagcg
     9721 gcgccactgc caataccgct gacatcgaca atcgcaacat cgagtacggc cgtttctttg
     9781 cagacgtcga agccgaaggc ggcgcgcgcg tcgcttacat cggagcggac atcgctagca
     9841 agctgttccc tgccggcaat cctatcggcg gcgaaatcta cattcgcggc ctgccgtatc
     9901 gcgtcgtcgg cgtcgaagcc gtgaagggca cggtcttcgg cattccgcag gacggcttca
     9961 tcgttattcc cttgaagact taccaactcg acttcggacc tttggtgcgt cagcgctcat
    10021 tgtatttcac agccaccgcg cagtctgatg aagttttcag tgatgcggtt gaggaagcac
    10081 gctttctgat gcgcgcgcgc cggcatctcg agccgaaaga gaaagacagc ttcggcatcg
    10141 ttacgccgga cgcgattacc ggcctgcgcg accgcctctt cggcaccatc tttatcgtgg
    10201 cgatgttggt tcccggcatc gcgctgatcg tcggcgcgat tgtgatcatg aacatcatgc
    10261 tggtgtcggt caccgaacgc accaaggaaa ttggcatccg taaggcgctc ggcgcgcgca
    10321 aagcggacat tctcaaacag ttcttatttg aagcggtgac gctcgcgacg atgggcggcg
    10381 ccgtgggagt ctttttggcg tgggtgattg gcaaactagt gaccgcggct atttttccga
    10441 cctatctttc actggccgcc at
//
LOCUS       DATDBY010000121         2133 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2158271, whole genome shotgun sequence.
ACCESSION   DATDBY010000121 DATDBY010000000
VERSION     DATDBY010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2158271"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..748
                     /locus_tag="VIT19_02400"
     CDS             <1..748
                     /locus_tag="VIT19_02400"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5837857.1"
                     /translation="AYTWGNPSRTIEDEYTKVRAENDWNSAQAALYPKRLRVFCSFNP
                     LEDYALAELERCAKDPNLKRGLKLHFGNSDVQLENPAHVEQVSRVFRAANKHRMTIVV
                     HLRASLSKQRPYGAMQARIFLEQLLPLTRNIDVQVAHLAGTGPGYDDRAADEAMAFLA
                     EAIERRDQRTRRLWFDVAGCVDPKISPANAALVTKRIRQAGVKRILYGSDAAAEPDRR
                     PRESWAAFRRLPLTEAEFNQIARNVAPYLR"
     gene            1106..>2133
                     /locus_tag="VIT19_02405"
     CDS             1106..>2133
                     /locus_tag="VIT19_02405"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY5837858.1"
                     /translation="MQRAKSLIRLTCLSLIGFSLLGAAVGQDVKRPARLELTPCQVPG
                     VADKVLCGTYQVFEDRAARKGRQITLKVVVFPATGPEREPDPFVYIPGGPGSSATEDA
                     PGIAQAFAAIRTRRDLVFIDQRGTGGSHPLDCKLFDPANPQSYLGHFFPLDDVRKCRQ
                     ELEPKANLKLYTTPIAMDDLDEVRAALGYERLNLFGGSYGTRASLVYLKRHPQSVRTV
                     TLQGVAPTNQFMPRDFAQVNERALQGVIAECAADEACNKAFPNLREETRSLLERLLKG
                     PIEVEVGLPNSATAKVSLSRDLAAEAIRYMLYSPQSAGRVPLFIHLAAQGNFAPLAES
                     ALLYRQRIV"
BASE COUNT          453 a          646 c          606 g          428 t
ORIGIN      
        1 tgcctacacc tgggggaatc cgtcgcgcac catcgaagac gaatacacca aagtccgcgc
       61 tgagaacgac tggaacagtg cccaggcggc gctctatccg aaacgcctgc gggtattttg
      121 cagcttcaat ccgcttgagg attatgcgct cgccgaactc gaacgctgcg cgaaagatcc
      181 aaatctcaag cgcggcctca agctgcattt tggtaactca gatgtgcaac ttgagaatcc
      241 ggcgcacgtc gagcaggtaa gtcgagtctt ccgcgcagcc aacaagcacc gtatgacaat
      301 cgtggtgcac ctgcgagcat ccctctcgaa gcagcgtccg tatggcgcga tgcaggcacg
      361 catatttctg gaacaactgc tcccgctgac tcggaacatt gatgtgcaag tggcgcatct
      421 cgccgggact ggaccgggct acgatgacag agctgcggat gaagcgatgg cctttctcgc
      481 cgaagcgatc gaacggcgcg accagcgcac gcgtcgtctt tggttcgacg tggccggatg
      541 tgtggatcca aaaatctcgc ctgccaacgc cgccctcgtg acgaagcgaa ttcgccaggc
      601 gggagtgaaa cgaattttat atgggtcgga cgccgcggcc gaacccgatc gtcgcccgcg
      661 cgagagctgg gccgcattcc gtcgcctgcc cctcaccgaa gcagagttca atcagatcgc
      721 caggaacgtc gcgccgtatc tgcgttgatc tttgcgttcg cgggttagcg cgcgaagcgc
      781 gtgtcagcgt aaagcctggg gcgtcatccc cagggattca gcccaaaaac aattaagccc
      841 gcgaagcggg cgatagaatt tggagtgggc cgagctccgc ggctacgccg ccgatgcgag
      901 gcgcagcctc gaactacttg atgaccgtga gccggtaagg cccagcctta ccgctatgtg
      961 ctgcggcaaa gccgccccca ctgcttaccg ctcactgctt accgctcact gcccactgct
     1021 taccgctcac tgcccactca tcactcatca cttatcacgt aaagtgaagc ttgtggtcgt
     1081 ctccggaaag cgttatatca acgtaatgca gagagcaaaa tcattgattc gccttacttg
     1141 tctgtcgctt ataggtttca gcttgctggg cgcggcggtc ggacaagacg taaagaggcc
     1201 ggcgcgtctt gaattaacgc cctgtcaggt tccaggagtt gctgacaaag tcctctgcgg
     1261 aacttatcag gtattcgaag accgggcggc gcgcaaaggg cggcagatca ctcttaaggt
     1321 ggtcgtcttt ccggctacgg gaccggaacg tgaacctgat ccgttcgtct atattcccgg
     1381 aggcccaggt tcttccgcga ctgaagatgc tcccggcata gcccaggcat tcgccgccat
     1441 ccgcacccgt cgcgatctgg tatttatcga tcagcgtggc accggcggct cgcatcccct
     1501 ggactgcaaa ctttttgatc ccgccaatcc acaaagctat ctgggacact ttttcccgct
     1561 cgacgacgtg cgtaaatgcc gccaggaatt ggagccgaaa gcgaatctca agctctacac
     1621 cacgccgatt gcgatggacg atctggatga agtacgcgcc gcgctcggtt acgaacggct
     1681 caatcttttc ggcggttcgt acggcacccg cgcctcgctt gtctatctca agcgccatcc
     1741 gcagagcgtc cgcacggtga cattgcaggg cgtggcgccg acgaaccagt tcatgccgcg
     1801 cgacttcgcc caggtgaacg agcgcgcgtt gcagggagtc atcgcagaat gcgccgccga
     1861 tgaagcatgc aacaaagcgt ttccgaattt gcgtgaggaa acgcggagcc tgcttgagcg
     1921 actcttgaag ggaccgatag aagttgaagt aggtctccca aactcagcca cggcgaaagt
     1981 ttcactctca cgcgatttgg cggccgaagc aatacgctac atgctctaca gcccacagtc
     2041 ggccggacga gttccgttgt ttattcattt ggcggcgcag ggcaactttg cgcccctggc
     2101 agaatcggcg ctgctgtacc gccagcgaat cgt
//
LOCUS       DATDBY010000122         3345 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_930757, whole genome shotgun sequence.
ACCESSION   DATDBY010000122 DATDBY010000000
VERSION     DATDBY010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_930757"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..768
                     /locus_tag="VIT19_02410"
     CDS             <1..768
                     /locus_tag="VIT19_02410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837859.1"
                     /translation="DIGFDVMTNSFKSTGSIPTFTDSGRVVFPSVTVRYLGSYDLRDA
                     GKRVGIGEIDFLVRARGQKGLEFLGGDFAYRQYELTAGAQVFFGFSTPADLFLRYQRT
                     VGATGNGAPEFQLFRLGGAQNVRGLEEGELIGSSFATDRTEFGVGLLPIIKGVRTLFA
                     RKSADQDFPTNLAGLDLTNTYIKVFYDRGQTFDEKTLSRILNPAHGVKALGIAAELRG
                     IGFLGRTRLNLTIGYARSPDSLLHPRGLVVTGVSMDF"
     gene            801..2090
                     /locus_tag="VIT19_02415"
     CDS             801..2090
                     /locus_tag="VIT19_02415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837860.1"
                     /translation="MDGLSLNFQGETRIFGPDGKVSALVNGQPVTKGAWRAQAQAGDP
                     KDNKIRYDFNGQQQPPVPVKYRFNQQNQLEAVIPAAANGGADSAPFAFMGSIQADDTQ
                     DVVYQLITADGTSMQRSLTVYGNCRIDPAKHNLVIDLADGGTAEIKGDSALQSLEALK
                     KDISPFKSADLLRFRASTSNLLSNGQTKKIAADIKFVGSWDFKGDQLVFASHIKGDIT
                     KPTVTLAFAGKFKAVSAGLVYMAGPDGTQIAFNINGQHQWNSGKAAWDVSIGYAKKQF
                     TAKVTGNVKIDKVLGDNRRLTLNADWTIQHANGTTSLKMALDAAYRWSDNNMLSIQAS
                     FQKDGQTITYDIKVEGKFVFKAGTLTFQIRYTNQDPDNKFAFQIAFQANPTSLIKALS
                     IVLNISENQVNIDFQFEMRMTWVDGKLQKSDPKPLNP"
     gene            2242..3231
                     /locus_tag="VIT19_02420"
     CDS             2242..3231
                     /locus_tag="VIT19_02420"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEY5837861.1"
                     /translation="MATLKPGSSGPDVKALQQKLKTLGFDPNGVDGNFGAGTKKAVIA
                     FQQSKGLQMDGVVGPGTQAALDAAATAITGGVAGGTLATDMSGVGAPLAGVGAIDAGV
                     VASETEVPPAGSSGAGAGAGTASATAANLNLAGLKGKIPDAVLAQIPGAAAEFNITTN
                     LRLAHFLAQCALESAGFTATVENLSYSAQRLLQVFPKYFKNVDVNAYARNPQKIGSRV
                     YANRMGNGDEASGDGFKFRGRGYIQLTGKNNYTSFSQFVGEDCVASPDLVATKYPLAS
                     AAFFFNSNSIWAICDQGSSDANVTSVTKRVNGGTHGLAERIQNFKKFRAALGS"
BASE COUNT          821 a          884 c          943 g          697 t
ORIGIN      
        1 gacatcggct tcgacgtgat gacgaacagc ttcaaatcga caggttcgat tcccaccttc
       61 accgattcgg ggcgtgtcgt ttttccttcg gttacggttc gctacctcgg aagctacgac
      121 cttagagatg ccggtaagcg tgtcggtatc ggtgaaatcg actttttagt gcgcgcgcgc
      181 ggacaaaaag gcctcgagtt cctgggcggt gatttcgcct atcggcagta tgagttgacc
      241 gcgggcgcgc aagtattctt cggcttctca actccggcgg atttgtttct gcgatatcaa
      301 cgaacggtgg gtgcgaccgg gaacggcgcg ccggaatttc agttgtttcg actgggcggc
      361 gcacagaatg tccgcggcct cgaagaaggt gaactgatcg gatcgagttt cgcgactgat
      421 cgcacagagt ttggagttgg attgctcccc ataatcaagg gggtaagaac tttattcgcc
      481 cggaaaagtg ccgatcaaga ttttccgacg aacctcgcag gccttgattt gacgaatacc
      541 tacattaagg tcttctacga tcgagggcag acctttgacg agaaaacact gtcgcgaatt
      601 ctgaacccgg cgcatggagt aaaagcactc ggaattgcgg cagagttgcg cggcattggt
      661 ttcctgggac gaacgcgtct caacttgacg attggttatg ctcgttcgcc tgactcactc
      721 ttacacccgc gcggtttggt ggtgacaggc gtctcgatgg acttctaact gaagactctt
      781 aacgcgaaca ggagaatgta atggacggac taagcctcaa cttccaggga gagacaagaa
      841 tattcggccc tgatggaaag gtcagcgcgc tggtcaacgg tcaaccggta acgaaggggg
      901 cgtggcgggc tcaagcccag gccggcgacc cgaaagacaa caagattcgc tatgacttca
      961 atgggcagca gcaaccgccg gttcccgtta agtatcgttt caatcagcaa aatcaactcg
     1021 aagccgtgat tccggccgcg gccaacgggg gcgccgattc tgcgccgttc gcgttcatgg
     1081 gatctattca agcggacgac acacaggacg tggtgtatca gctgatcact gcggacggca
     1141 catcaatgca acgcagcctg acggtgtatg ggaattgtcg catcgatccg gcaaagcaca
     1201 atttggtgat tgacctggcg gacggcggca cggccgaaat caaaggcgac agtgcgcttc
     1261 aaagtctcga agcacttaag aaagacatct ctcccttcaa gagcgctgat ctcctgaggt
     1321 tccgggcgag cacctcaaac cttcttagca acggccagac gaagaagatc gcggccgaca
     1381 tcaagtttgt cggtagttgg gatttcaaag gtgatcaact tgtctttgcc agtcacatca
     1441 aaggcgacat cacgaagcca accgtaaccc tggccttcgc cggaaagttc aaagccgtga
     1501 gtgccgggct tgtttacatg gccggtccgg atggaacgca gatcgccttc aacatcaatg
     1561 gtcagcacca atggaacagt ggaaaagcag catgggacgt gtccatcggc tatgcaaaga
     1621 aacagttcac ggcgaaggtg accggcaacg ttaagattga caaggtgttg ggcgacaacc
     1681 gccgattaac actgaacgcg gactggacga ttcagcatgc taacgggact acatctctca
     1741 agatggccct ggacgcagcg taccgctggt cggacaacaa catgttgtcc attcaggcgt
     1801 cgtttcaaaa ggacgggcag acaattacct acgacatcaa agtcgaaggt aagtttgtgt
     1861 tcaaagccgg aaccctgaca tttcagatcc gctacacaaa ccaggatccg gacaacaagt
     1921 tcgcctttca gatcgctttt caggcaaatc caacaagttt gattaaagct ttatctatcg
     1981 ttctcaacat ctccgagaat caggtcaata ttgattttca gtttgagatg cgcatgacct
     2041 gggtggatgg caaactacag aaatcagacc cgaagcctct aaatccgtaa gccggcttgc
     2101 acgattcgaa cagcgaatcg aagagcggct ggcggcagca aacgatttgt tctacgtccg
     2161 tccagggaaa ccgattttgt tcgacaatgc gagtggcgct cactagaatg ctcgccactt
     2221 cagaaagatg agagagaaat catggctacc ctaaaaccag gttcatcggg tcctgacgtc
     2281 aaggcccttc aacaaaaact caaaaccctc ggtttcgatc cgaatggggt tgacggtaat
     2341 ttcggcgccg ggaccaaaaa agccgtcatc gcttttcaac agagcaaagg tttgcaaatg
     2401 gacggcgtcg tagggccggg cacacaggcc gctttggatg cggccgcgac cgcaatcacg
     2461 ggcggcgttg ccggaggaac tctcgcgact gacatgtcgg gcgttggcgc ccccctcgcg
     2521 ggagtcggtg caatcgacgc gggtgttgta gcttctgaaa cggaagttcc gccagctggc
     2581 tcgagcggcg caggcgccgg tgcgggaaca gcttcggcga ccgctgcgaa tctgaatctc
     2641 gccggtttga agggcaagat tccggatgcg gtgctcgcgc aaatccccgg ggccgcggcg
     2701 gagttcaaca tcacgacgaa tctgcggctg gcgcactttc tcgcgcagtg cgcgctggaa
     2761 tcggcgggct tcaccgccac cgtcgaaaac ctgagctaca gcgctcaacg cctgctgcaa
     2821 gtatttccaa agtatttcaa gaacgtcgac gtgaatgcct atgcccggaa tcctcagaag
     2881 atcggcagcc gagtctatgc aaaccgaatg ggcaatggcg acgaggcttc aggagatgga
     2941 ttcaagttcc gcggccgcgg ctacattcaa ttaacgggca agaacaatta caccagcttc
     3001 tcgcagtttg tcggggaaga ctgcgtggca agtccggatt tagtcgcgac gaagtatccg
     3061 ctggcttcgg cggcattctt cttcaactca aacagcattt gggcgatctg tgatcaaggc
     3121 tcgagcgacg cgaacgttac gagcgttacg aagcgcgtta atggcgggac acacggtctg
     3181 gcagaaagaa ttcaaaactt caagaagttt cgtgccgcac taggctccta gcaaaggggc
     3241 ggttcgagat ggctgacaat tgccgcttca gcgcctaact gaatagctcg ccaaagtctc
     3301 cggaaacacg cgcacgccca acggcatttt cgccatcgga atcct
//
LOCUS       DATDBY010000123         3271 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2959231, whole genome shotgun sequence.
ACCESSION   DATDBY010000123 DATDBY010000000
VERSION     DATDBY010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2959231"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1200
                     /locus_tag="VIT19_02425"
     CDS             <1..1200
                     /locus_tag="VIT19_02425"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEY5837862.1"
                     /translation="PEAILPHTVFANPSHTATKEQRTRVAILCDFAEENWPSMDLVGE
                     MLAMHLDRNKFSAHKLSPPFQRRFTRITSANQPFNADRVFNRFWDYQRWLRPQLADFD
                     LFHVVDHSYSQLVHALPSARSVVSCHDLDAFRCLIEPEIEPRPLIFRKMMERVLSGLQ
                     KAERVTCDSIAIRDELLAHKLVEPDRIRVIPLGVHPTCSPEADATPDAAAAELVGANS
                     NAIDLLHVGSTIRRKRIDVLLKVIANVRREFPNARLLRVGGAFTDEQLHLVDQLALKD
                     SIVVLPRISREVLAAIYRHATLVLQPSDAEGFGLPVIEAMACGTPVVASDLPVLREVG
                     GDAAAYAPVADTGAWSYTVTSLLNDRVQDPEKWTLRRDAGLVHAHEFTWSKFATRTAD
                     VYRELLA"
     gene            1337..2533
                     /locus_tag="VIT19_02430"
     CDS             1337..2533
                     /locus_tag="VIT19_02430"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5837863.1"
                     /translation="MVSIPTGLVASTARAETAPRPRLVTEHKPRVLQLGKFYPPHPGG
                     MESHLEALCGQLKEKTDLEVIVAASNSFRSSEELIDGVKVAHLGRLFTLRSAPMCPTM
                     VRRIREAKADLVHIHWPNPTALLAYLASGHRGRLVITYHSDVVRQRVLNRVFEPILRR
                     GLDRADAIIVSSVNYMDSSEVLRPYREKCRVISFGIDIERFERPDELGVVRLRKQFGS
                     RMILSVGRLVYYKGFDFLIDAMKSVNAHLVLAGNGPLEAALRARIRARGVEDRVTLLT
                     KVKDVVPFYHAAELFVLPSIARSEAFGIVQLEAMACGKPIVNTQLDSGVPSVSIDGVT
                     GITVPPADSEALGRAINSLLDDPQRAMLAHAAYRRVREQFSLAGMAEQTLALYHEVLN
                     SDVCPS"
     gene            2553..>3271
                     /locus_tag="VIT19_02435"
     CDS             2553..>3271
                     /locus_tag="VIT19_02435"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MraY family glycosyltransferase"
                     /protein_id="HEY5837864.1"
                     /translation="MNTYLLIFIISTVASLVLTPVVSRLSRRFGWLDVPRDSRRVHEI
                     PTPRLGGAAIFAAMVLALTTVFVASSSFANLLTTNSAQLLSVILPASIIFFVGIYDDF
                     VGTNATVKFAIQALAGLAFCAMGGRIHALSIPLVGSVELHPFVGYALTLIWTVGISNA
                     FNLIDGMDGLASGASLFAAIVMLIVSLILGQPLITVFSIVLCGSLIGFLPYNFHPASI
                     FLGDSGALFIGFMLAALSVLGT"
BASE COUNT          645 a          961 c          920 g          745 t
ORIGIN      
        1 ccagaagcga tactgccgca cacagtgttc gcgaatccca gtcacaccgc caccaaagag
       61 cagcgtacgc gcgtcgcgat cctttgtgac tttgccgaag agaactggcc cagcatggat
      121 ctggtcggcg aaatgcttgc catgcacctc gaccggaata aattctcagc gcacaaactg
      181 tcgccacctt ttcagcgtcg attcacacgc atcacttcag cgaatcaacc cttcaacgcc
      241 gatcgcgtat tcaatcgttt ctgggactat cagcgatggc tgcgaccgca gctcgccgat
      301 ttcgatctat ttcatgtcgt cgatcacagc tactcgcagc tcgtgcacgc tctgccctcc
      361 gcccggtccg tcgtttcctg ccacgatctc gacgcgtttc gttgtctgat tgagccggag
      421 atcgagcccc gtccccttat ctttcggaag atgatggaac gcgtgttgag cggactgcag
      481 aaagctgaac gtgttacctg cgacagtatc gccatccgcg acgagctgct cgcgcacaaa
      541 ttggtcgagc cggatcggat ccgggtcatt cccctcggcg tgcatcccac atgttcgccc
      601 gaggccgatg cgactcctga tgcagcggcg gctgagctcg tcggagcgaa ctcaaacgcc
      661 attgacttgc ttcacgtggg gagcaccatt cgacggaagc gtatcgatgt gttgctgaag
      721 gtcattgcaa atgtccggcg tgaatttcca aacgcgagat tgctgcgcgt cggcggcgcc
      781 ttcacggatg aacaactcca cctggtggat cagctcgcgc ttaaagacag catcgtggtg
      841 cttcctcgca tatctcgtga agtgctcgcc gccatctacc gccacgcgac tcttgtcttg
      901 cagccttccg atgctgaagg gttcggccta cccgtgatcg aagcgatggc gtgcggcact
      961 cccgtcgtgg ccagcgatct gccggtcctg cgcgaagtcg gcggggacgc cgcggcctac
     1021 gcccccgtgg cagacactgg cgcctggagc tacacggtca cctcgctgct aaatgatcgc
     1081 gttcaagacc ccgaaaagtg gaccttgcgc cgcgacgccg ggctcgtcca cgcccacgaa
     1141 ttcacctggt cgaaattcgc cacgcgcacg gccgatgtgt accgcgaact ccttgcctaa
     1201 aacctggcaa aaagcctgca aaaacgttcg gttttcggcc taatcgtgcc tcaagcccgc
     1261 cacaagaagg gctcaagaat tcctcaagcc gcgacattca taatgcggcc attcttaagc
     1321 tccgaaaaga aaacaaatgg tgagcatccc gacaggttta gtagccagca cagcgcgagc
     1381 ggaaacagcg ccgcgcccac ggctggtcac tgaacacaag ccacgcgtgc tccagctcgg
     1441 aaagttttat ccgccacatc ccggcggcat ggaaagtcat ctggaagcgc tctgcgggca
     1501 gctcaaagaa aaaaccgatt tagaagtcat cgttgcggcg agtaacagtt tcagatccag
     1561 cgaggaactg atcgacggag tgaaagtagc tcatcttggt aggctcttta cgctcagatc
     1621 agcaccaatg tgcccgacaa tggtccgtcg tattcgcgag gcgaaggcgg accttgtgca
     1681 catccattgg cccaacccga ctgcgctgct ggcgtatctc gccagcggcc atcgcgggcg
     1741 gctggtaatc acatatcaca gcgacgtagt ccggcagaga gttctgaacc gggttttcga
     1801 gcccatcttg cgccgcggcc tggatcgcgc tgacgcgatc atcgtgtcga gcgtgaacta
     1861 catggacagc tctgaagttc tgcgcccgta tcgcgagaag tgccgagtca tatcgttcgg
     1921 catcgatatc gagcgatttg aacgaccgga tgaattagga gtcgtgagac tccgtaagca
     1981 gttcggctcg cgaatgattt tgagtgtggg gcggctggtt tattacaaag gctttgattt
     2041 tctgatcgat gcaatgaagt cggtcaacgc gcacctcgtg ctcgccggca acggtccgct
     2101 ggaagccgcg ttgcgtgctc ggattcgggc ccgtggcgtt gaagatcgcg tcacactgtt
     2161 gacgaaagtg aaagacgttg tgccgttcta tcacgccgcc gaattgtttg tgctgccttc
     2221 gatcgcgaga agcgaagcgt tcggcattgt gcagttggaa gcgatggcct gtggtaaacc
     2281 aatcgtcaac acccaactcg acagtggtgt cccgtctgtt tcgattgacg gcgttaccgg
     2341 cataacggtt ccgccggctg attcggaggc gctcgggcgc gcgatcaact cgctcctgga
     2401 tgatccgcag cgagcgatgc ttgcccacgc cgcgtatcgg cgagtccgag agcagttcag
     2461 tttagccggg atggccgaac aaacattggc gctatatcac gaagttttga attcagacgt
     2521 ttgtccatct tgatacgcaa gacgatcgca cgatgaatac ctacctgcta attttcatca
     2581 tctcgacggt ggcgtcattg gttctgacgc cggtcgtcag ccggctgagc cgcaggtttg
     2641 gttggctgga tgtgccccgc gattctcggc gcgttcacga gatacccacg cctcggctgg
     2701 gcggcgcggc aatttttgcc gcgatggtgc tcgccttaac gacggtattt gtggcgagta
     2761 gcagcttcgc gaacttgctg actacaaact cggcgcaact gcttagcgtg attctcccgg
     2821 cctcaatcat tttctttgtc ggcatttatg acgactttgt cggcactaat gcgacggtta
     2881 agtttgcaat tcaggcattg gccgggttgg ctttctgcgc catgggtggc cggatccatg
     2941 ccttgtcgat tccgctggtt ggctcagttg aactgcatcc cttcgtaggc tacgcgctca
     3001 ctttgatctg gacggtgggc atcagcaacg ccttcaactt gatcgacggc atggacggat
     3061 tggcatccgg cgcctcgctg ttcgcggcca tcgtcatgct gatcgtgtcg ctcatactcg
     3121 gccagccctt gattacggtc ttctcgattg tgctgtgcgg atctctcatc ggatttctgc
     3181 cgtacaattt tcatcccgct tcgattttcc tgggtgactc cggggcgctc tttatcggat
     3241 tcatgctggc ggctctgtcg gtgctgggca c
//
LOCUS       DATDBY010000124         2384 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_315179, whole genome shotgun sequence.
ACCESSION   DATDBY010000124 DATDBY010000000
VERSION     DATDBY010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2384
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_315179"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="VIT19_02440"
     CDS             <1..268
                     /locus_tag="VIT19_02440"
                     /inference="COORDINATES: protein motif:HMM:NF012619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP synthase delta/epsilon chain alpha-helix
                     domain-containing protein"
                     /protein_id="HEY5837865.1"
                     /translation="GVLAYTQDGTTQQLHVSGGFVEVSDNRVSVLAEIAERPEEIDAA
                     RARLAREHTEKQLSAWSGTEEDFEKARVKLERSMVRLQLASGSR"
     gene            complement(436..1185)
                     /locus_tag="VIT19_02445"
     CDS             complement(436..1185)
                     /locus_tag="VIT19_02445"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: protein motif:HMM:NF003625.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEY5837866.1"
                     /translation="MSARLNVNIDHVATVRQARRTIEPSVVAAAMICEQAGADGITVH
                     IRGDRRHIQDADLFVLRQAVTTYLNVEMAATEEMLKIVIDVRPDAVSLVPETPREITT
                     EGGLNVRANIAIVRAAVSKLRECGILASLFIDPDPGQIEAAREVNAQQVELCTAAYAE
                     ATLGAVGIHGEGAARANHELRRLSEGAALAAQYGLHVAAGHGLTTRNVGAVAQISEIA
                     EFNIGHHIVSRAVFVGLDQAVREIRDAIASA"
     gene            complement(1293..2057)
                     /locus_tag="VIT19_02450"
     CDS             complement(1293..2057)
                     /locus_tag="VIT19_02450"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dolichyl-phosphate beta-glucosyltransferase"
                     /protein_id="HEY5837867.1"
                     /translation="MTIVVPAFNEAARLGVSLSKIVDYLNQHFESSELIVVDDGSTDD
                     TAGVAERAVAKAESVSTQVIRYEKNRGKGYAVRVGLLSAAADVVLFTDADLSTPITET
                     PKLVDPIRSGGFDVTFGSRALDRSLIGVHQPWRREQGGRLFNLLVRAVTGLPFWDTQC
                     GFKAFRMSVCRPLLESVQIDRFGFDVELIYVAQLAGLRLSEIPVRWNNDAASKVSVIR
                     DSFRMVDEVWRIRRAAARGDYNAAMKAARAAAETRP"
BASE COUNT          511 a          706 c          648 g          519 t
ORIGIN      
        1 cggcgtgctc gcctacactc aagacggaac aacgcagcaa ttgcacgtgt ccgggggatt
       61 cgtcgaagtc agcgacaatc gcgtttcggt actcgcagaa atcgctgaac gtcctgaaga
      121 aatcgacgcc gctcgcgccc gactcgcacg cgaacatacg gaaaagcagt tgagtgcgtg
      181 gagtgggacg gaagaagatt ttgaaaaggc ccgggttaag ctggagcgtt cgatggtgag
      241 actgcaactc gcttcaggtt cgcgctaata acgagtttgc ggctgtgccg cagcacattg
      301 cggaaagcct acggctttcc gattcgggga tgtaagaaaa atccggaggc cggagcctcc
      361 ggatttgttt tgtgcaagct agccggtaag ccagaggctt accgcagtgt gcgatggcaa
      421 agccatttag ccggcttacg ctgacgctat cgcatcgcga atttcccgaa ccgcctgatc
      481 caatccaaca aataccgccc gcgaaacgat gtgatggccg atattgaatt cggcaatttc
      541 gcttatctgg gcgacggcgc ccacgttcct tgtcgtcaat ccgtgaccag cggcgacatg
      601 caggccgtat tgagcagcga gtgccgcgcc ttcgctcaga cgccgcagtt cgtgatttgc
      661 ccgagcggcg ccttcgccat gaattcccac tgcgcccaga gtcgcttccg cgtaggcggc
      721 cgtgcataac tcgacctgtt gcgcgttgac ttcacgcgcg gcttcgattt gtcccggatc
      781 gggatcgatg aacaggctcg ccaggatccc gcattcgcgc agcttactta ctgcggcgcg
      841 cacgatggcg atattcgcgc gtacgttcag tccgccttcc gtggtgattt cacgcggagt
      901 ctcgggcact aaagagactg cgtcaggcct aacgtcaatc acgatcttca acatctcttc
      961 cgtggccgcc atctcgacat tcaagtaagt cgtgacggcc tgtcgcaaca cgaacagatc
     1021 agcatcctga atgtgacgcc gatctccgcg aatgtgcacc gtaatgccgt cggcgccggc
     1081 ctgttcgcag atcatcgccg ccgcgacgac gctcggttca atggtgcggc gcgcctgtcg
     1141 cacggtggcg acgtgatcga tgttgacgtt gagtcgtgcg ctcataagtt caattaacca
     1201 ccttcagagt ccaaagtcca aagtccaagg tccaaagtcg ttgttcgaat ggatgataaa
     1261 ctttggacgt tggagctgga acgcaccctc ccttacggtc gggtttctgc cgcggctcgt
     1321 gcggctttca tcgcggcgtt gtaatcaccc cgcgccgcgg cgcgccgaat ccgccatact
     1381 tcatcaacca ttcgaaagct gtcgcgaatt accgaaacct tgctggccgc gtcgttattc
     1441 caacgcacag ggatctcgct taaccgcagc cccgcaagtt gcgcgacgta gattagttcg
     1501 acgtcgaagc cgaatcgatc aatttgcacg ctttctaaca gaggccggca gacgctcatg
     1561 cgaaacgctt tgaacccgca ctgcgtgtcc caaaacggca agccggtcac cgcgcgcaca
     1621 agcaaattga agagccgccc gccctgttcg cgtcgccatg gttgatgaac tccaatcagt
     1681 gaacgatcca aagcacgcga gccaaaggtc acatcgaacc cgccacttcg aatcggatcg
     1741 accagcttcg gagtctcagt aattggcgtc gaaagatctg cgtcggtaaa cagcaccacg
     1801 tcagcggcgg ctgacaacaa gccaacccgc accgcataac ccttgccgcg gtttttctcg
     1861 tagcgaatta cctgcgtgct cacgctttcc gctttagcga ctgccctttc cgcgacaccg
     1921 gccgtgtcat ctgttgaacc atcatccacc acaatcagtt ccgaggattc aaaatgttgg
     1981 ttcagataat caacaatttt tgagagcgag acgcccagac gtgccgcttc attgaaggcg
     2041 gggacaacga ttgtcaattg gggcgccatg gaaaacgcat tgtccgtgaa gacggtcgag
     2101 cacacaagcg cgcgtttcga aaggctggtt tcgtattttg gctttgtaat cctttccgac
     2161 tttgcgtctg tcagtactga cttcgcgcca agcacgcaaa gacacgcaaa gcaggtttaa
     2221 ggacgcgtga aaccttcccg gcaaggggcc acgttagatc tcgcgctcgg ggtgtgcctt
     2281 cgcgctgtgc tatatttttc gcactggttt agtcatgact cgcagtttcg ccatcgccgc
     2341 ttcgctgatt ctggttaccg caaccctggc gggtggcctc tatt
//
LOCUS       DATDBY010000125         2322 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_315154, whole genome shotgun sequence.
ACCESSION   DATDBY010000125 DATDBY010000000
VERSION     DATDBY010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_315154"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="VIT19_02455"
     CDS             <1..268
                     /locus_tag="VIT19_02455"
                     /inference="COORDINATES: protein motif:HMM:NF012619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP synthase delta/epsilon chain alpha-helix
                     domain-containing protein"
                     /protein_id="HEY5837868.1"
                     /translation="GVLAYTQDGTTQQLHVSGGFVEVSDNRVSVLAEIAERPEEIDAA
                     RARLAREHTEKQLSAWSGTEEDFEKARVKLERSMVRLQLASSRS"
     gene            complement(295..1050)
                     /locus_tag="VIT19_02460"
     CDS             complement(295..1050)
                     /locus_tag="VIT19_02460"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: protein motif:HMM:NF003625.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEY5837869.1"
                     /translation="MSARLNVNIDHVATVRQARRTIEPSVVAAAMICEQAGADGITVH
                     IRGDRRHIQDADLFVLRQAVTTYLNVEMAATEEMLKIVIDVKPDAVSLVPENPREITT
                     EGGLNVRTNIAIVRAAVSKLRECGILASLFIDPDPEQIEAAREVNAQQVELCTAAYAE
                     ATLGAVGIHGEGAARAHHELRRLSEGAALAAQYGLHVAAGHGLTIRNVGAVTRISEIA
                     EFNIGHHIVSRAIFVGLDQAVREMREAIAASGQ"
     gene            complement(1180..2007)
                     /locus_tag="VIT19_02465"
     CDS             complement(1180..2007)
                     /locus_tag="VIT19_02465"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dolichyl-phosphate beta-glucosyltransferase"
                     /protein_id="HEY5837870.1"
                     /translation="MPPQLTIVVPAYNEAARLGLSLSKIVDYLNQHFESAELIVVDDG
                     STDDTAGVAERAVAKAESVSTQVIRYEKNRGKGYAVRVGLLSAAADVVRFTDADLSTP
                     ITETPKLVDPIRSGGFDVTFGSRALDRSLIGVHQPWRREQGGRLFNLIVRAVTGLPFW
                     DTQCGFKAFRMSVCRPLVESLQIERFGFDVELIYVARLAGLRLSEIPVRWNNDAASKV
                     SVIRDSFRMVDEVWRIRRAAARGDYNAAMKAARAAAEAFTTEDTEKDKAKGQAQRAK"
BASE COUNT          489 a          695 c          631 g          507 t
ORIGIN      
        1 cggcgtgctc gcctacactc aagacggaac aacgcagcaa ttgcacgtgt ccgggggatt
       61 cgtcgaagtc agcgacaatc gcgtttcggt actcgcagaa atcgctgaac gtcctgaaga
      121 aatcgacgcc gctcgcgccc gcctcgcacg cgaacacacg gaaaagcagt tgagtgcgtg
      181 gagtgggact gaagaagatt ttgaaaaggc ccgggttaag ctggagcgat cgatggtgag
      241 actgcaactg gcatccagcc gcagctgagc cttaagccct ccctcatggt cgggctactg
      301 ccccgacgcc gcgatcgcct cccgcatttc gcgcaccgcc tggtccaatc caacaaatat
      361 cgcccgcgaa acgatgtgat ggccgatatt gaattcggca atttcgctta tgcgggtgac
      421 ggcgccgacg tttcttatcg tcaatccgtg accagcggcg acgtgcaggc cgtactgggc
      481 tgcgagtgcc gcgccttcac tcagacgccg cagttcgtgg tgcgcgcgtg cggcgccttc
      541 gccatgaatt cccactgcgc ccagagtcgc ttccgcgtag gcggccgtgc ataactcgac
      601 ctgttgggcg ttgacttcac gcgcggcttc gatttgttcc ggatcgggat cgatgaacag
      661 gcttgccagg atgccgcatt cgcgcagctt acttaccgcg gcgcgcacga tggcgatatt
      721 cgtccgcaca ttcaatccgc cttccgtggt gatttcacgc ggattctcgg gcaccaaaga
      781 gactgcgtca ggcttaacgt caatcacgat cttcaacatc tcttccgtgg ctgccatctc
      841 gacattcaag taagtcgtga cggcctggcg caacacgaac agatcagcat cctgaatgtg
      901 acgccgatcc ccgcgaatgt gcaccgtgat gccgtcggcg ccggcctgtt cgcagatcat
      961 cgccgccgcg acgacgctcg gttcaatcgt gcggcgcgcc tgtcgcacgg tggcgacgtg
     1021 atcgatgttg acgttgagtc gtgcgctcat atatctaaat aaccacagag gacacagaga
     1081 agacaataag ccaagagcta agagcaaagg gcgaagtgca tggcgcaatg cgtaagaccg
     1141 cgcaatctga aatacacaag caaatgcgaa ttaatgaatt cacttggctc tttgcgcctg
     1201 acccttagct ttgtctttct ctgtgtcctc tgtggtgaat gcttctgccg cggctcgtgc
     1261 ggctttcatc gcggcgttgt aatcaccccg cgccgcggcc cgccggatcc gccatacttc
     1321 atcaaccatt cggaagctgt cgcgaattac cgaaaccttg ctggccgcgt cgttattcca
     1381 acgcacaggg atttcgctca accgcagccc cgcaagtcgc gcgacgtaga ttagttcgac
     1441 gtcgaagccg aatcgttcaa tttgtaggct ttctaccaga ggccggcaga cgctcatgcg
     1501 aaacgctttg aacccgcact gcgtgtccca aaatggcaag ccggtcaccg cgcgcacaat
     1561 caaattgaag agccgcccgc cctgttcgcg tcgccatggt tgatgaactc caatcagtga
     1621 acgatccaaa gcacgcgagc caaaggtcac atcgaacccg ccacttcgaa ttggatcgac
     1681 cagtttcgga gtctcagtaa ttggcgtcga aagatctgcg tcggtaaacc gcaccacgtc
     1741 agcggcggct gacaacaagc caacccgcac cgcataaccc ttgccgcggt ttttttcgta
     1801 gcgaattacc tgcgtgctca cgctttccgc tttagcgact gccctttccg cgacaccggc
     1861 cgtgtcatct gttgaaccat catccaccac aatcagttcc gcggattcaa aatgttggtt
     1921 cagataatca acaatctttg agagcgagag gcccagacgc gccgcttcat tgtaggcggg
     1981 gacaacgatt gtcaattgcg gcggcataga attacgcatt gtccgtgaag attcgcaggc
     2041 agacaagcgc gcgtttcgaa aggctggttt cgtgttttgg ctttgcgatc ctttgcgacc
     2101 ttgggtctgt cggttctgac ttcgcgccaa ggccgcaaag acacgcaaag caggtttaag
     2161 gacgcgtgaa accttccaga caggggccac gttagatctc gcgctcgggg tgtgccttcg
     2221 cgctgtgcta tatttttcgc actggtttag tcatgactcg cagtttcgcc atcgccgctt
     2281 cgctgattct ggttaccgca accctggcgg gtggcctcta tt
//
LOCUS       DATDBY010000126         2409 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_922787, whole genome shotgun sequence.
ACCESSION   DATDBY010000126 DATDBY010000000
VERSION     DATDBY010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_922787"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1496)
                     /locus_tag="VIT19_02470"
     CDS             complement(<1..1496)
                     /locus_tag="VIT19_02470"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY5837871.1"
                     /translation="MPPNIARLGSEGARKLALGLAELSRGKDINSVTVEDLLLYLPTR
                     HEDRSRMLEIRDLRNEQEASLNLTVRIAKPRYIGRSRFIFSVSASDQNNTGPQVLIEW
                     FISGQRAKQIVEFYTKRFVRGTRFIAFGKWQLDKLGTFCLKVQKPDELEVISSDEGDA
                     DPLLSAIHVGRCVPVYRKIGDIRPKQLRELLHRVLADLPDDAIKENLPGDLRERQKLI
                     GRAVALRQIHFPPGEASLDEYERARSPAHHRLIFEELFWLSLALSVKRGHRTKESKAT
                     TIKIDDAIKRRIKSVLPFTLTEAQRKVVKEIFRDMKSAAPMNRLLQGDVGSGKTIVAL
                     ISMLTAMENGYQTALMAPTEILAEQHARNIKRILAKSPYRVEVLTGSLKTGEKRQLHA
                     AIAAGEVHCCVGTHALIQENVRFKNFGLAVIDEQHRFGVMQRAELRERGLNPDVLVMT
                     ATPIPRSLAMTVYGDLDVSIIDEMPPGRTPIVTKVFADNADDRKDVKRL"
BASE COUNT          550 a          629 c          650 g          580 t
ORIGIN      
        1 agtcgcttca catcttttcg atcgtcggca ttgtccgcga acactttggt cactatcggc
       61 gtacgaccgg gtggcatttc atcaataatc gaaacgtcga gatcgccgta cacagtcatc
      121 gccagcgaac gcggaatcgg cgtcgccgtc atgacaagca cgtcagggtt caagccacgc
      181 tcgcgcagtt cagcacgttg catgacaccg aagcgatgct gctcgtcaat caccgccagc
      241 ccgaagtttt tgaaccgaac gttttcctga atcagggcgt gtgtgccaac gcaacagtgg
      301 acttcgccgg ccgcaatggc ggcgtgtagt tggcgtttct cgccggtttt cagcgagcca
      361 gtgagaactt cgacgcggta aggcgacttc gccagaatac gtttgatatt tcgcgcgtgc
      421 tgttcggcga gaatttcagt cggcgccatg agcgctgttt gatagccatt ctccatcgcg
      481 gtcagcatcg aaatcagcgc gacgattgtc ttgccgctgc cgacgtcccc ttgcagcaga
      541 cggttcatcg gcgcggcaga tttcatgtcg cggaagatct ctttgacgac cttccgttgc
      601 gcttccgtga gcgtgaacgg caggaccgat ttgatgcggc gtttgattgc gtcgtcgatc
      661 tttatcgtcg tggctttgct ttcttttgtt cgatgcccgc gctttaccga caacgcgagc
      721 gaaagccaaa acagttcttc gaatatcagg cggtggtggg ccgggctgcg cgcgcgctcg
      781 tattcatcaa gcgatgcttc gcctggtgga aaatgaattt gccgtaaagc cacagcgcgt
      841 ccgattagct tctgtcgctc gcgcaaatcg ccgggcagat tttccttgat cgcgtcgtcg
      901 ggaagatcgg caagcacgcg atgaagaagt tcgcgcaact gctttggacg gatgtcaccg
      961 atttttcggt acaccggaac gcagcggccg acatgaatcg cagagagtaa cggatcggca
     1021 tctccttcat cacttgaaat gacctcgagc tcatcaggct tctgtacttt cagacaaaag
     1081 gttcctagtt tatcgagctg ccattttccg aatgcgatga agcgcgttcc gcggacgaat
     1141 ctcttcgtgt agaactcaac aatctgttta gcgcgttggc cggagataaa ccattcgatg
     1201 aggacctgag gtccggtatt gttctgatca ctcgcggaaa ccgagaaaat aaatcgcgac
     1261 cggccgatgt aacggggttt cgcgatgcgc actgtcaggt taagcgatgc ttcctgctcg
     1321 ttgcgcaaat cacgaatttc gagcatgcgc gaacgatctt catgacgggt cggcaggtag
     1381 agcagaagat cttcgacggt gactgagttg atgtcttttc cgcgggaaag ttcggcgagg
     1441 ccgagcgcaa gtttccgcgc tccctccgag ccaagccgcg caatatttgg aggcaaatcc
     1501 agtatgcgtg tgtcgaggga gatagaagat ttgagcgcca tccgcgcgaa tcatagcaca
     1561 agggttctgc cattattggc gcatgaaaaa ccgccgcgac gaagcagaat cgacgcggcg
     1621 gcatttagtt ttacaaagtt tacggctatg taaaaaacct tttctgtagc ccagccgttt
     1681 acggctgggt acaactcgtg aattaaagaa tggagcccct ttaggggctt tcatcattag
     1741 gaggaacata tgtcccacgt gtttcaccaa ctctactacc atttcgcttg ggctacacac
     1801 tctcgcgaac ctctgatcga ccgagcctgg cgaccacaac ttctcgagat cattaacgat
     1861 gaagtaaaga cgcgcggcgg atttcctatc cgtcacaatg caatgcccga tcatgcacac
     1921 ctgctttgcc ggctgccacc aacgatcttg cttgctgatt tcataggaca gttgaagggg
     1981 gcgacctcat tcagggtcaa taaggagatt caacctaagt tcaaattgca ttggcaagaa
     2041 ggttatggtg ttctgagctt gcgcaaggcg tggaaaacta tcggatgtgc ttgagacgtt
     2101 tgaaacgaat gatgatgatt ggctgaagtc ttgatgaagc cgcctgaagg cggcttaatt
     2161 tatttccttt ccggcaaccc agccgtaaac ggctgggcta cagaaaaccg ctgcgcgtcg
     2221 agccatcgtt aacgccttta agattacagg cttgaaacgg cagactttag gcggggtccg
     2281 cgcagtgttg ctcgaaagcg ctgatcaaat ctgaagagat ctgagccggg ccctttcctt
     2341 cgatttgcca acgctccatc atgtaaacca acttaccgtc tttcagaatt ccaattgacg
     2401 gagacgaag
//
LOCUS       DATDBY010000127         2673 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1540841, whole genome shotgun sequence.
ACCESSION   DATDBY010000127 DATDBY010000000
VERSION     DATDBY010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2673
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1540841"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2427
                     /gene="leuS"
                     /locus_tag="VIT19_02475"
     CDS             <1..2427
                     /gene="leuS"
                     /locus_tag="VIT19_02475"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEY5837872.1"
                     /translation="FLHMGHVRNYSIGDALAWYKRLRGFNVLHPIGWDSFGQPAEQAA
                     IKRGIQPREWTEANIVAMRGQFQRLGISYDWSREIAAHRPDYYKWDQWFFLKMLERGL
                     AYKRTSPVNWCPKEETVLSNEQSSGGICWRCGTPVVKKEIEQWYLRITNYAEQLVEDI
                     KEIESGWPEKVIKRQRDWVGRSEGAYIDFGVQDLQEKIRVFTTRIDTIFGATAIVVAA
                     EHPILPQLLEDSSLKDDVLKFAEQIKAARAIKAEDQTAEEEKLGMNTGRLAVNPFNGE
                     LLPVWVANYVLMDYGAGAVMSVPAHDERDFEFAQKYTLPIRQVIAPIVHGQQSEPADT
                     APGHDQSIEMKHAFVESGVLVNSGEWSGNLSQDAIREMSEYAAAKNFGGGAVTYRIRD
                     WGISRQRFWGAPIPVVYCPKCGMVPVPEKDLPVLLPEKAEFTGTGESPLKAVPEFVNT
                     TCPKCGAAATRETDTMDTFVDSSWYFFRYCDPRNESMPFEPESVAKWTPVDQYIGGDS
                     HAVMHLIYTRFWTKVMRDLGLVNFNEPVKRLLTQGMVTNRVEETNEWKAMSKSLGNGV
                     DPDEMIEAFGADATRLFILFAAPVENELRWSETGIEGAVRFLRRVWTMVYRYAGSAGI
                     LPAGEHAGGVRTEFSDGARALRRKTHQTIARVTDDFEKLDLNTNVAALMELSNALGEF
                     NVDPATASDADSFAVREALEALVVMLAPFSPHIAEEMWEGLGHAGGLLKSAQWPSADP
                     ELAKKDELEIPVQVNGKLRARVVVSPDISEADLRELALADAKVQSFIDGHQIVKVIVV
                     PQRLVNVVIK"
BASE COUNT          561 a          725 c          862 g          525 t
ORIGIN      
        1 tttctgcaca tggggcacgt gcggaactac tcgatcggcg acgcgctggc ctggtacaag
       61 cgcctgcgcg gtttcaacgt tttgcatccg atcggttggg acagcttcgg acaaccggct
      121 gagcaggcag ccatcaagcg cggcattcaa ccgcgtgagt ggactgaagc aaacatcgtt
      181 gccatgcggg gacagtttca gcggctgggc atcagttacg actggtcgcg ggaaatcgcc
      241 gcgcatcggc cggattacta caaatgggac cagtggttct tcctgaagat gctggagcgc
      301 ggcctggcgt acaagcgcac ctcgccggtc aactggtgtc cgaaagaaga gacggtgctg
      361 tcgaacgaac agtcgtcagg cggcatctgc tggcggtgtg gaactccggt cgtcaagaaa
      421 gagatcgaac agtggtatct gcgcattacg aattacgcgg agcagttggt cgaggacatc
      481 aaagagattg aaagcggatg gcccgaaaag gtcatcaagc gacagcgtga ctgggtgggt
      541 cgcagcgaag gcgcgtatat cgatttcggc gtccaggatc ttcaggaaaa gatccgtgtg
      601 ttcaccactc gcatcgacac gatctttggc gcgactgcga tcgtggtcgc ggctgagcac
      661 ccgattctgc cgcagctact cgaagactcg tctttaaaag acgacgtgct taagtttgca
      721 gaacagatca aagcggcgcg cgcgatcaaa gctgaagacc agacggcaga agaagagaaa
      781 ctcggcatga acaccgggcg gctggccgtc aatccgttca acggcgaact gttgccggtc
      841 tgggtcgcga actacgtgct gatggactac ggcgcgggcg cggtgatgag cgtgccggcc
      901 cacgatgaac gcgatttcga gttcgcgcag aaatacacgc tgccaattcg acaggtcatc
      961 gcgccgatcg ttcatggcca gcagagtgaa ccagccgaca ctgcgccggg tcacgatcaa
     1021 tcgatcgaaa tgaaacacgc gttcgtcgag tccggcgtgt tggtgaacag cggcgaatgg
     1081 agcggcaacc tttcgcagga cgcgattcgc gaaatgtctg agtatgcggc ggccaaaaac
     1141 ttcggtggtg gcgctgtcac ttatcgcata cgtgactggg gcatctcgcg gcagcggttc
     1201 tggggcgcgc caattccggt tgtgtactgc ccgaagtgcg gaatggtgcc agtgcccgaa
     1261 aaggatctgc ccgtcttgtt gccggagaag gctgagttca ccggcaccgg cgaatcgcct
     1321 ttgaaggcgg tccctgaatt cgtcaacacc acctgtccga agtgcggcgc ggcggcgacg
     1381 cgcgagacgg acacgatgga cacgtttgtc gattcgtcct ggtacttctt tcgttactgc
     1441 gatccgcgca acgaatcgat gccgttcgag ccagagtccg tcgcgaaatg gacgccggtg
     1501 gatcaataca tcggcggtga ctcgcacgcg gtcatgcacc tgatctacac gcgtttctgg
     1561 acgaaggtga tgcgcgactt aggcctggtg aatttcaacg aaccggtgaa gcgcctcctg
     1621 acgcagggca tggtgactaa tcgcgtcgaa gagaccaacg aatggaaggc gatgtcgaag
     1681 tcgctcggca acggcgtcga tccggacgag atgatcgaag cgttcggcgc cgacgcgaca
     1741 cgcctgttca ttctgttcgc cgcgccggtc gagaacgagt tgcgctggtc ggaaacgggc
     1801 attgaaggcg cggtgcgatt tctgcggcgt gtttggacga tggtctatcg gtacgcaggg
     1861 agcgcgggca tcttgcccgc cggagagcac gccggaggcg tgcgtaccga atttagcgac
     1921 ggggctcgcg cgctgcgccg caagacgcac cagacaattg cccgggtgac cgacgatttt
     1981 gagaagctcg atctcaacac gaacgtcgcg gctttgatgg agttgtcgaa tgccctgggt
     2041 gaattcaacg tcgatccggc aactgcttca gacgctgact cgttcgccgt gcgcgaagca
     2101 ctcgaagcgc tggttgtgat gctggccccg ttctctccgc acatcgccga agagatgtgg
     2161 gaaggattag gacacgccgg cggtctgctg aagtctgcgc agtggccgtc tgccgatccg
     2221 gagctggcga agaaagatga gctggagatt cccgttcagg taaatggcaa gctgcgtgcg
     2281 cgggtcgtcg tgtcgcccga catttccgaa gccgacttgc gcgaattggc gctggcggac
     2341 gcaaaggtcc agagcttcat cgacggtcac cagatagtta aggtgattgt tgtgccccag
     2401 cggctggtca acgtcgtgat caaatagaat gcttgcctgg cttgtcctca gccgttaaaa
     2461 tcttcgcgaa cccagactcg cgcggagtcg tacgatgtaa ccgattcact gatgaaagag
     2521 tgtccaaagt gtcacgtctg ttttgccgac gacgtggctt attgtcctga tgacggcgcc
     2581 gcgacgggtc cgtccatcgc cggcgaaccg atccttgacg gccgctacaa ccttgagcgg
     2641 cggctgggcc agggcggcat gggcattgtt tac
//
LOCUS       DATDBY010000128         2264 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2595412, whole genome shotgun sequence.
ACCESSION   DATDBY010000128 DATDBY010000000
VERSION     DATDBY010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2595412"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..744
                     /locus_tag="VIT19_02480"
     CDS             <1..744
                     /locus_tag="VIT19_02480"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY5837873.1"
                     /translation="DTNAQTQNAPTRVLDDPSIQHGRVVFKHNGVETIDGFLARPKAD
                     GVYPSVLVIAGNRITEEYIPNTCAALAVAGFVGLAPNIFHVLPDTARTLAEMRAAGAN
                     HTDLDVLEDLDIGADYLRQQSFVKTDTMGVLGFCYGGKIAMLYGARSRQIDAVVPFHP
                     GVTKASDVKRLKAPVQIHHGTADQAVALAESQRLVKELKGQRTPVELFTYEGAGHGFL
                     AYTRPTYNAEAAKLAWRRAMPFLHKYLGS"
     gene            831..2144
                     /locus_tag="VIT19_02485"
     CDS             831..2144
                     /locus_tag="VIT19_02485"
                     /inference="COORDINATES: protein motif:HMM:NF013158.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEY5837874.1"
                     /translation="MPRTLIFILALFIVGLCSVDARACSCAGPSAPCEEYWEATAVFI
                     GTVIEGKLVTVKEGDYEHQQRAVRISIDEAFRGVEGAEVEVLTGLGGGDCGFGFRRAQ
                     QFLIYAYRSESDQKLHTNICTRTRPISEADPDLLYIRGLSKANAGGTISGKVVRNRRN
                     ETGGSNGEPLAGVKVTIDGPQKAEAVTDAKGEFKIEGVEPGEYRVVPAAPKGLATRGP
                     DEKVKVADRGCAAVHFWLESNAKLGGRVLNAAGLSVAKAEIVLIQADKERYQGYADYA
                     YAEEDGSYSFKLIPEGQYVLQIRYDGMSSQNRPFPVMYYPGTPDKSQARVFTIKEGET
                     IELDIKVPPLPSEVEVRGQVAWPDGKPASTANVGYMVPKDSVFYGVKVDEAGRFSFKA
                     YTGMTLSVSASVEVTKGKHANAHSGPIVAGVNTEPIKLVLTPPSP"
BASE COUNT          527 a          605 c          667 g          465 t
ORIGIN      
        1 gacacaaacg cgcaaactca gaacgcgccc acgcgtgtcc tggatgaccc ttccattcaa
       61 catggccgtg tcgtcttcaa acataacggc gtcgagacca tcgatggctt cctcgcgcga
      121 ccgaaggcgg acggcgtcta cccatcggtg ctggtgattg cgggaaaccg catcaccgaa
      181 gaatacattc cgaacacatg cgcggcgctg gcggtggccg gatttgtcgg gctcgctccg
      241 aacatctttc atgttttgcc tgacacggca agaacgctgg cggaaatgcg tgcggctggt
      301 gcaaaccaca ctgatctgga cgtgcttgaa gatctcgata tcggcgcgga ttatttgcgg
      361 cagcaatcgt tcgtcaagac tgacacgatg ggcgtgcttg gtttttgcta tggcggaaag
      421 atcgcgatgc tttatggtgc gcgctcacga caaattgatg ccgtcgttcc gtttcacccg
      481 ggtgtgacga aggccagcga cgtgaaacga ctaaaagctc cggtgcagat tcatcacggc
      541 acggccgacc aggccgtcgc gttggctgag agtcagcgcc tcgtgaaaga gcttaagggg
      601 caacggacgc cggtggagct gtttacgtat gaaggagcag gtcacggttt tctcgcttac
      661 acgcggccga cgtataacgc cgaggcagcg aagcttgcct ggcgacgcgc gatgccgttc
      721 ctgcacaagt atctcgggtc ctaatcgttc tgggtgtggc acagacttca gtctgtgaat
      781 ccgactggaa atcacagact aaagtctgtg ccacagcaag gggaattcag atgccacgta
      841 ctctcatttt tatacttgcc ctcttcatag ttggattgtg cagcgtcgat gcccgcgcat
      901 gcagttgcgc aggccccagt gctccgtgcg aagaatactg ggaagccacg gccgtattca
      961 tcggaacggt aattgaaggc aagctcgtca cggtaaagga aggcgattac gaacatcagc
     1021 agcgcgcggt acgaatatca attgatgaag cgtttcgcgg cgtcgaaggc gcggaagtcg
     1081 aagtgttgac cggcctgggc ggtggtgact gcggattcgg ctttcgccga gcgcagcagt
     1141 ttctcatcta cgcctatcgg tctgagagtg accaaaaact gcacaccaac atttgcacgc
     1201 gcacgagacc gatatcagaa gccgatccgg atctcttgta catccgcggc ctaagcaaag
     1261 ccaacgccgg cggcacgatc agcggcaagg ttgtacgcaa tcgccggaac gaaacaggcg
     1321 ggtcgaatgg tgaaccgtta gccggcgtga aggtcacgat cgatggtccg caaaaggcgg
     1381 aagcggtcac cgatgcaaaa ggcgagttta agattgaagg tgtcgagccg ggtgaataca
     1441 gggtcgtgcc ggctgcaccg aagggactgg cgacgcgcgg tcctgatgaa aaagttaaag
     1501 tcgccgaccg cgggtgcgcc gctgtgcact tctggcttga gtcgaacgcc aaactcggcg
     1561 gtcgcgtgct aaatgctgcg gggctttcag tcgcaaaagc cgaaatcgtt cttattcagg
     1621 ctgacaaaga aaggtaccag ggatacgcgg actatgcgta cgcggaagaa gacggctcgt
     1681 acagtttcaa actgatcccg gaggggcagt atgtcctgca aattcgttat gacggcatga
     1741 gcagtcagaa tcgtccattt cccgtgatgt attacccagg cacaccggat aagtctcagg
     1801 cccgagtctt cactatcaag gaaggcgaga cgattgagct cgatatcaag gttccgccgt
     1861 tgccttctga agtcgaggtt cgcgggcagg ttgcttggcc cgacggcaag ccggcgtcaa
     1921 cagcgaatgt tggttacatg gtgccgaagg acagcgtctt ttacggagtc aaagttgacg
     1981 aagctggacg attcagcttt aaggcttaca ccggcatgac gctcagtgtc agcgcttcgg
     2041 ttgaagtcac taaaggcaaa cacgcaaacg cccactcagg tccaattgtg gccggcgtaa
     2101 ataccgagcc gatcaagctt gtgctgacgc cgccgtctcc ctagaaaaaa ggcgggcaac
     2161 gcccgcctct aaacatttcg taaaactgac gttccgataa accccgaatc agctttcctt
     2221 cttcggccgt tcattcgctt tcaaaactcg cttgcgcagg cgga
//
LOCUS       DATDBY010000129         2090 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2155387, whole genome shotgun sequence.
ACCESSION   DATDBY010000129 DATDBY010000000
VERSION     DATDBY010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2155387"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..1256
                     /locus_tag="VIT19_02490"
     CDS             267..1256
                     /locus_tag="VIT19_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 5,10-methylenetetrahydrofolate
                     dehydrogenase/5,10-methenyltetrahydrofolate
                     cyclohydrolase"
                     /protein_id="HEY5837875.1"
                     /translation="MQARSYVTMAAMSRRDKQRAQILAGRPAADAIKSEVAEEVRELK
                     RTRSVTPCLAAVLVGDDTASAVYVRNKVRACEEVGIASKHIALDAASSSEALLAVVRE
                     LNADNDVDGILVQLPLPKQIDDTTIIEAIDPQKDVDAFHPTNVGLLAMGRPRFVPCTP
                     AGIIELLDRNNIEIAGANAVVVGRSQIVGRPVASLLLQRHATVTVCHSKTRDLPSVTR
                     QADILIAAIGRPGYIRGEFIKPGAIVIDVGVNKINDPNQARELFGDEAEKRIEAIETR
                     GYTLVGDVHPAEADAVAGQRTPVPGGVGLLTVAMLMRNTLQAAKWRKGLSAQD"
     gene            1266..1877
                     /gene="coaE"
                     /locus_tag="VIT19_02495"
     CDS             1266..1877
                     /gene="coaE"
                     /locus_tag="VIT19_02495"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: protein motif:HMM:TIGR00152.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEY5837876.1"
                     /translation="MLKVGLTGSIAVGKSFVLDILRELGARTIDADAVAREVVEPGTA
                     GLKAVVDEFGAEVLKPDGSLNRAALGSIVFADAAKRQKLNSILHPFIIVRQDEVMQEW
                     ENETPDAIAVVDAALMIESGGYKRFDKLIVVHCQTQVQLERLMKRDNISREEAERRIT
                     AQMPQEEKKKHADYLIDTSEGFESARQQTTAVWQELSGTDFSL"
BASE COUNT          475 a          581 c          609 g          425 t
ORIGIN      
        1 tttcagattt cgttccgcca cactgactgg cggcgaacac gaacaggatt aaggcgattg
       61 tcagaactcg tttttcgatt gtcatgatga aggtacgcgt agcttaacgg ttgcacgcgc
      121 gcgtctcaac ttaacgttac atcgacgcgc gttttccttt gcgtttctta gcgcctttgc
      181 gccttggcgt gaaccaaacg cgctcgaaca atttcacgca aggcgcaaag acgcaaaggc
      241 tcgcaaagag ggagctggac aaccaagtgc aagctcggtc ttatgttacg atggccgcga
      301 tgagccgccg agacaagcag cgcgcgcaaa ttctcgccgg gcgccccgcc gccgacgcga
      361 taaaaagcga agtcgccgaa gaagttcgtg agctgaagcg aacccgcagc gtcacgcctt
      421 gtctggctgc tgttttggtt ggcgacgaca cggcgtccgc ggtttacgtg cgcaataaag
      481 tgcgtgcctg tgaagaggtc ggaatcgctt caaagcacat tgcgctggat gcggcatcgt
      541 cgagcgaggc cctgttggct gtcgtgcggg agctgaatgc ggacaacgac gttgatggga
      601 tactggtgca gttgccactg cccaaacaaa tcgacgacac gaccattatt gaggcaattg
      661 atccccagaa agacgtcgac gcttttcatc caacgaacgt cggtctgctt gcaatgggcc
      721 gtccgcgctt tgtgccttgc acgcccgcgg gcatcatcga actgctcgac cgaaacaata
      781 ttgagatcgc cggcgcaaac gctgtcgtcg taggtcgcag ccagattgtc ggccgccccg
      841 tcgccagttt actcctgcaa cgccacgcaa cagtgacggt ttgccattca aagacgcgcg
      901 atctgccttc cgtcacgcgc caggcagaca ttctaatcgc cgcaatcggc cggccgggat
      961 acattcgcgg cgagttcatc aagccgggcg cgattgtgat tgacgtcggc gtcaacaaga
     1021 ttaacgaccc caaccaggcc cgcgaactct tcggcgacga agcagagaag agaatcgaag
     1081 cgatagagac gcgtggctac acacttgttg gtgacgttca tcccgcagaa gctgatgctg
     1141 tcgccggaca gcggacgccg gtgccgggcg gtgttggtct actcaccgtt gcgatgttga
     1201 tgcgaaatac tctgcaggca gcaaagtgga gaaaaggact gagtgctcag gactgaggac
     1261 tgagaatgct caaagtcgga ctcaccggct cgattgccgt cggcaaatcg ttcgtgctgg
     1321 atatcctgcg cgaactcggt gctcggacga ttgacgccga tgcggtggcg cgggaagttg
     1381 tcgagccggg gacggcggga ctgaaagccg tcgtcgacga attcggcgct gaggtcctaa
     1441 aacccgatgg atcgctgaat cgcgcggcac ttggctcgat cgttttcgct gatgcggcaa
     1501 aacgtcagaa gctaaactcg attcttcatc cattcatcat cgtgcgtcag gacgaagtca
     1561 tgcaggagtg ggagaacgaa actcccgacg cgatcgcagt tgttgatgca gcgctgatga
     1621 tcgagtccgg cggctacaaa cgcttcgata agctgatcgt tgtccattgc cagacgcagg
     1681 tccaacttga gcggttgatg aagcgcgata acatttcgcg cgaagaagcc gagagacgca
     1741 tcaccgcaca gatgccgcag gaagagaaga agaaacacgc ggattacctg attgacacct
     1801 ccgaagggtt cgaaagcgcg cgtcagcaaa ccacagcggt gtggcaggaa cttagtggca
     1861 cagacttcag tctgtgaatc tcgcgaatcg caatcacaga ctgaagtctg tgccacagct
     1921 cagaaaaagc attgctcgcc gtgcatcggc gtgttacttt gagcccgacg atggctcgcc
     1981 tctcatcgcg tgacagattt cttggtttcc tgctcactct gaatgtcgtt ctcgctggct
     2041 gctccgcgtc ggcgaccaac tcacctttct tcggaaagac cgatccaccg
//
LOCUS       DATDBY010000130         2306 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_721345, whole genome shotgun sequence.
ACCESSION   DATDBY010000130 DATDBY010000000
VERSION     DATDBY010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_721345"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            208..1779
                     /gene="aroE"
                     /locus_tag="VIT19_02500"
     CDS             208..1779
                     /gene="aroE"
                     /locus_tag="VIT19_02500"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEY5837877.1"
                     /translation="MESNKARICVPVCVGAIDELPAAVKRAAEVGDIVELRLDCLASE
                     ELEQRKVEIRAIIDERRQPLILTLRPAQFGGARPIDDSDRLLFRMNSWYGATAEGIEY
                     WDVEHDLALLLKQREREGNDLLQLGICDWKRTIASYHDFVGVPADLERIFEDMGSTSA
                     AILKIAIQADDATDCIPVFKLLDRARREGRELIAIAMGQAGVMTRILGPSRGSFLTYG
                     SLDEDSTTAPGQVTARDLREVYRIDNIDRETQIMGVIGRPVAHSISPYIHNAALAQTN
                     LNAVFIPFEVHDVDDFMRRMVRKNSREIEWNLRGFAVTAPHKSAVMKHLDWIEPAAKE
                     IGALNTIVVQDGELHGYNTDAAGFIGPLNSRVGSLAGARCAVIGAGGAARAVVWALRQ
                     ERASVTLFCRDPEKAKAIQDQFQASCRSLADVTFTEFDIVVNATPLGTRGELETETPV
                     TAENLRGVRLAYDLVYNPLETQFLSEARQAGCETLGGLEMLIAQAVEQFRLWTGKEPG
                     IKTMHAAASRTLQRL"
     gene            1902..>2306
                     /locus_tag="VIT19_02505"
     CDS             1902..>2306
                     /locus_tag="VIT19_02505"
                     /inference="COORDINATES: protein motif:HMM:NF013094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HEY5837878.1"
                     /translation="MNNERYSRQILFSGIGTEGQAKLLNSRAVIIGCGALGSSQAEAL
                     ARAGVGKLRIVDRDFVESSNLQRQTMFTEHDAAERLPKAVAAANHIGEVNSDIEVEPE
                     IADVNHSNIERLIAGADVVLDGTDNFATRYLIN"
BASE COUNT          536 a          590 c          700 g          480 t
ORIGIN      
        1 acgctcctcc ctacgaggtt tcgccgccga gcactcccgg agaacttcga ccaccggtcg
       61 cgagcgtaac cgaaggaacg acgcgtcatc ttggaactga agcggcgacg cgacatttcg
      121 atcaagagtc ctagtggcgc agagccgggt catgaattga gagctgaggc gatggaggtt
      181 acaacccatc gcctctaatt ctgtttgatg gaaagcaaca aagcgagaat ctgtgttccg
      241 gtttgtgtcg gggccatcga tgagctgcca gctgcggtga agcgagccgc ggaggttgga
      301 gacatagttg aactgcgttt ggactgcctg gcgagtgagg aactggaaca gcgtaaagtc
      361 gaaatccgcg caatcattga cgaacgaaga caaccattaa ttctgacctt gcgaccggca
      421 cagtttggcg gtgcaagacc tatcgatgat tctgacaggc tccttttcag gatgaacagt
      481 tggtatggcg cgacggctga ggggattgaa tactgggatg tcgagcatga cttggctttg
      541 ttgttgaaac agcgcgaaag agaagggaac gatttacttc aactcggcat ttgtgattgg
      601 aaacggacga tcgcttccta ccacgatttc gttggcgttc cggctgatct tgaaagaatc
      661 ttcgaagata tgggatcaac ttccgccgcc attttgaaaa tagcaattca agccgacgac
      721 gcaaccgact gcattccagt tttcaagctg ctggatcgcg cgcgacgaga aggtcgcgag
      781 ttgatcgcga ttgcgatggg tcaggcgggc gtgatgacgc gaatcctggg accatctcgc
      841 ggctcgtttc tcacgtacgg atcgctggat gaagacagca ccaccgcacc aggccaagtg
      901 acggctcgtg acctgcgcga ggtttatcgg atcgacaaca tcgatcgtga gacgcaaatc
      961 atgggcgtga ttggccggcc cgtggcgcat tcgatctcgc cgtatattca caacgccgcg
     1021 ctcgctcaaa caaacctcaa tgcggtcttc attccttttg aagttcacga cgtggacgat
     1081 ttcatgcgtc gaatggtgcg gaaaaactcg cgtgaaatcg aatggaacct gcgcggattt
     1141 gctgtgaccg cgccgcacaa gtctgctgtg atgaagcatc tcgattggat cgaaccggcg
     1201 gccaaagaga ttggtgcgct taatacgatc gtcgttcagg acggtgagct tcacggctac
     1261 aacacggacg cggcggggtt tatcgggcca ttgaacagcc gcgtgggatc tttggcgggc
     1321 gcacgctgcg cggtgatcgg ggcgggcggc gcggcgcgcg cagttgtgtg ggcactgcgg
     1381 caggaacgag cgagtgtcac tctgttttgc cgcgacccgg aaaaggcaaa ggcgatccag
     1441 gatcagttcc aggcgagttg tcgctcgctt gcggacgtga ccttcactga attcgatatt
     1501 gtcgtcaatg cgacgccgct gggaacgcgg ggcgaactgg aaactgagac tccggtgacc
     1561 gcggaaaacc tgcgcggggt gcgattggct tacgatctcg tttacaatcc gcttgagacg
     1621 caattcttaa gtgaagcacg ccaagccggc tgcgaaaccc tcggcggact tgaaatgctg
     1681 attgcacagg cggtcgagca gttcagactc tggacgggaa aagagccggg tattaagaca
     1741 atgcacgctg ccgcgagtcg aactctgcaa cgcctttgag gcacagaaat gaacggcgga
     1801 aaatcagaag gaaagaagcc gggcttgttg aagaggattt ggcgcggaat tgttgggttc
     1861 tgcgatttca tctcaactgt gcctgaactt tttctcggac aatgaataac gaacgctaca
     1921 gccgacaaat tctgttctca ggcatcggca cagagggcca ggctaagctc ctaaactcgc
     1981 gcgcggtgat catcgggtgc ggagcgctcg gttcgtcgca ggctgaggct ttagcgcgcg
     2041 caggcgtcgg caagctgcgc atagtcgatc gagacttcgt agaatcttca aatctccagc
     2101 gccagacgat gtttacggaa catgacgcgg cagagcgtct gccgaaagcc gtcgccgccg
     2161 ctaatcacat cggcgaagtt aacagcgaca tcgaagttga acctgagatc gccgacgtta
     2221 atcattcaaa catcgagcgg ctaatcgcgg gcgccgacgt ggttctggac ggcaccgaca
     2281 atttcgcgac gcgctacctg attaac
//
LOCUS       DATDBY010000131         4518 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_79457, whole genome shotgun sequence.
ACCESSION   DATDBY010000131 DATDBY010000000
VERSION     DATDBY010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4518
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79457"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..1019
                     /gene="prmC"
                     /locus_tag="VIT19_02510"
     CDS             141..1019
                     /gene="prmC"
                     /locus_tag="VIT19_02510"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEY5837879.1"
                     /translation="MTERKHDPDALSLIQAQAAGAESLRAAGVIDPSLEAGSLLAHTL
                     RRDRTYLITHGNDLVTGEQLDRFRVLIARRAAREPSQYMIGYQEFFKLSFEVTPDVLI
                     PRPETELIVEAALELADGERSLSILDVGTGSGCIVISLLHELKNAQGTATDISPNALE
                     VARRNAQRHNVSDRVTFIQADSLAPLTQSAAFSLVVSNPPYIPAGDLTTLQPEVRDHE
                     PLTALASGVDGLDHIRALLRETPRVLYHSGYFIFEIGFGQGDAIEQLVDRASWHLIEV
                     RKDLQGIPRTVVLQKR"
     gene            complement(1032..2585)
                     /locus_tag="VIT19_02515"
     CDS             complement(1032..2585)
                     /locus_tag="VIT19_02515"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY5837880.1"
                     /translation="MRILLYNPDNGVTHNFMPHLWMFLLKTLTPAEHEVLLIDGNARP
                     MDEQQLVEFIRAENIGLVGIGAMTRMIARAYRMADAIRAAGVPVVMGGPHVTEVPDEA
                     LGRDGGPRHADAVALGEADETWPQIVSDAARGQLKDIYAPLDETGKERKPSLQPYPEI
                     PWDKMDLDQFDLIPKPLRSLLKRQGSGWGSVHMIPIESGRGCPYGCEFCTVTGFFGDS
                     IRFRSNESVVNELLRLKRHARENRQQAMVFFIDDNFAISIKRTKSLLRDIIAANAQLP
                     WIAQISANLLRDEELVDLIAASDGKWIFIGMESIDSANLADVNKSFNKPAEYEAVLNR
                     LADRGIYAITSFIFGLDNDTVGVADRTLEAIESWPPGLPIFGQLTPFPSTPLYQRLLK
                     ADRLTRPKHWLDFAPFHMAHTPLKMGIEEVHAELNKAWVRSYSPERNASAVASIEDKP
                     IGYQIMHFVTRLTFRGIYFPQMGKRAWAKLLFANRGLIYSLGRKGLFGKRRVERSTAV
                     PAGVPITES"
     gene            3203..>4518
                     /locus_tag="VIT19_02520"
     CDS             3203..>4518
                     /locus_tag="VIT19_02520"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5837881.1"
                     /translation="MESETLLKPEGSAAHTERSVETACRAAKELQNIGEYEAAFDAIA
                     AFWPGIGARPHTEGLPKAEAAELVLRAGALAGWLGSSRQVPGAQQFAKALISESIKSF
                     EELGLSEKLAESQTSLAVCYWREGAMDEARVLFQTALAKAEDPVNKLRILVNSTIVEV
                     STNHLNDALTLLDRAAAILDHVKDDAALGCYYMQRGIVMRRRGGVENLDRALLDHAAA
                     RVHFEKANHRRYFARAQNNLGVIMLELGRYDEALDTLEDARRTFADLGDVGTAAQVDE
                     TRARVYVAQHRYAEAEKLAQASVSVLERGGEQSLLVESLQTLGVAQARQQRHQAAIET
                     LRRAVEVAETAGDPESSGRALLTLVEELHAHLPAEEVSRAYSEADQKLGEEVGRETLT
                     RLRACARLIGSERSALAQPARLDATFDQQVRQFESTLIRQALEEANG"
BASE COUNT         1019 a         1282 c         1289 g          928 t
ORIGIN      
        1 actcgcttcg tgctacccga agtaaagttg caatctcgcc tgagttccga cagtggaagt
       61 taacctctgc aaaaaacact ccacgccggt caaccgttaa attcgcgcca gattaatata
      121 cgattgtcct ggtctgcaac atgactgaac gaaaacacga ccctgatgcc ctctcgctca
      181 ttcaggcgca agcggccggc gccgagtcgc tccgggccgc cggcgtaatc gatccgagcc
      241 tggaagccgg atcattgttg gcccatacgc tgcgccgcga tcgcacgtac ctcatcactc
      301 atggtaacga cctggtgacc ggcgaacagc ttgatcgatt tcgcgttttg atcgcgcgcc
      361 gggctgcgcg tgagccgtcg cagtacatga tcggttatca ggagttcttc aaactgagct
      421 ttgaagttac gccggacgtt ttaattccga gacctgagac agaactaatc gtcgaagcag
      481 cgctcgaact tgcggacggt gaacgatcgc tttcaatcct ggacgtcggc accggctcag
      541 gttgcatcgt gatctcgttg ttgcatgaat tgaaaaacgc gcaggggacg gcgacagaca
      601 tttcgccgaa tgcgctggag gtggcgcgca gaaacgcgca acgccacaac gtcagcgatc
      661 gcgtgacgtt tattcaggct gattctcttg cgccgttaac tcagtcagcg gccttttcgc
      721 tggtggtgtc gaatccgccg tacatccccg ccggagacct cacgactttg cagccggaag
      781 ttcgcgacca tgaacctcta accgcgttag catccggagt tgatgggctt gatcacatac
      841 gcgcactgct gcgcgaaacc ccgcgggtgc tgtatcactc tggctatttt atttttgaga
      901 ttgggttcgg ccagggcgat gccatcgaac aactagttga tcgcgcaagc tggcatttga
      961 ttgaagtaag gaaagacctg cagggcattc cccgcaccgt ggtgctgcaa aaacgatgac
     1021 gcgggttgtc gttagctttc agttatggga acaccggcag gcaccgccgt tgagcgctca
     1081 actcgtcgct tgccgaacag ccctttacga cccagtgaat agatcagccc ccgattagca
     1141 aacaacagtt tggcccaggc gcgcttaccc atttgcggga agtagatgcc gcgaaaagtt
     1201 aatcgcgtga cgaagtgcat gatttggtaa ccaatcggtt tgtcttcgat tgaagcaacc
     1261 gcgctcgcgt ttctctcagg gctataggat ctgacccagg ccttgttcag ttccgcgtgc
     1321 acttcctcaa ttcccatctt taacggcgtg tgcgccatgt gaaaaggcgc aaaatcaagc
     1381 caatgcttcg gccgtgtgag ccggtcggcc tttaatagcc gctgatagag cggggttgag
     1441 ggaaacggcg tgagctgtcc aaagatcggc aggcccgggg gccacgattc gattgcttcc
     1501 agcgttcgat cagcgacgcc caccgtgtcg ttatccagac caaagatgaa agaggtgatg
     1561 gcatagatgc cgcgatcggc gaggcggttc agcaccgctt cgtattcggc cggcttgttg
     1621 aagctcttgt tcacatcagc cagattagcg gaatcaatcg attccatgcc gatgaagatc
     1681 cacttgccgt ccgaggccgc aatcagatcc accaactctt cgtcacgcaa aaggttggcg
     1741 ctgatctgcg cgatccaggg tagttgcgca ttcgccgcaa tgatgtcccg caacagcgac
     1801 ttcgttcgct tgatactgat cgcaaaattg tcgtcgataa aaaacaccat ggcctgctgg
     1861 cggttttctc gcgcgtgtcg ctttaatcgc agcagttcat tgacgacgct ttcgttactt
     1921 cgaaatcgaa tcgaatcccc gaagaaccca gtcaccgtac agaactcgca gccgtaaggg
     1981 cagccgcggc cggattcgat cggaatcatg tgcacagatc cccagcccga accctggcgt
     2041 ttgagtaacg aacgcaaggg tttcgggatc agatcgaact gatccaaatc catcttgtcc
     2101 cagggaatct caggatatgg ctgcaaactt ggttttcgtt ccttacccgt ttcgtcgagc
     2161 ggcgcgtaga tgtccttcaa ttgtccgcgc gcggcgtcgc tgacgatctg cggccaggtt
     2221 tcatccgctt cacccagcgc cacagcgtca gcatgccgcg gaccgccgtc acgaccgagc
     2281 gcttcgtccg ggacctcagt aacgtgcggg ccgcccatta cgaccggcac ccccgccgcg
     2341 cgaatggcat cagccatccg gtaagcgcgc gcgatcatcc gggtcatcgc tccaatcccg
     2401 accaagccaa tattttccgc gcggatgaac tcgacgagtt gctgctcgtc catcgggcgg
     2461 gcgttgccat caatcagaag gacctcgtgt tccgccggag tcaaagtctt cagcaggaac
     2521 atccacaggt gtggcatgaa attgtgagtg accccgttat cggggttgta cagtaaaatt
     2581 cgcattgagt ctccgaccgc gctcggctta acaaccaagc cagcaccggc aggggtccgt
     2641 gaaagctggc aggacagcag aaggcgtaaa tttctcaaac gccggaaggc cttctattga
     2701 acccttctcc tcagcgtatg gcgcggacta tagcacaagc ccccgaatcg cgcacggatt
     2761 ctggcaagtc cacagtttct ccgcgaattc cctgcgaaaa aacgtgtctt ggcaggctgt
     2821 ggcgcaggtg ctagaatccg cgccgttagc gcaattgagt aacagtgcac gaacaccctc
     2881 aaagcgtgcg actgtcgatg gtcgaccctc agggttcaaa acgttggaga gtatgggttg
     2941 aatagattga cgtcagtcag ctcaatcgcc tcgccatgag agcagaggct gcgtcagcaa
     3001 cgggttcata gttcgtcagg ctgaaaccgt atcgcggatg gtttgccgga cgggcgatcc
     3061 aacgtctcga tcacttaata acaaccgttt tcagctttgc cgcctcatcg gcggagcgac
     3121 cgtttttgtc gggacagcct cacccacacc cggcgttctc agaagaccta aacattctta
     3181 gagccaggag aaaaactgaa agatggagtc tgaaactctg ttgaagccgg aaggcagcgc
     3241 tgcgcatacg gaaaggagcg ttgagaccgc atgtcgagcg gcgaaagagt tgcaaaacat
     3301 cggcgagtac gaggcggcct ttgatgcgat cgcagcgttc tggcccggca tcggtgcacg
     3361 gccgcacacg gagggtctgc cgaaagcaga agcagcggaa ctggtgctgc gagctggggc
     3421 gctggcgggt tggcttggaa gttcgcgtca ggtccccgga gcgcaacagt tcgcaaaggc
     3481 tctaatcagc gagagcataa aaagttttga agaactcgga ctcagtgaaa aactcgcgga
     3541 gtcacagacg agcctggcgg tttgctattg gcgcgagggc gcgatggatg aagctcgcgt
     3601 tttgttccag actgcactgg caaaagcgga agatccagtc aataaacttc gcattctggt
     3661 caacagcacg atcgtcgagg tatcgacaaa ccatctgaat gacgcgctga cactgctcga
     3721 tcgcgcggcc gctattttgg accacgtaaa agacgacgca gcactcgggt gttactacat
     3781 gcagcgcggc atcgtgatga gacggagggg aggcgtcgag aacctcgacc gcgccttgct
     3841 tgatcatgca gccgcgcgcg tacattttga gaaggcaaac caccggcgct acttcgcgcg
     3901 cgcgcaaaac aacctcggcg tcatcatgct cgagttaggt cggtatgatg aagcactgga
     3961 cactctcgaa gacgcacggc gcacgtttgc cgatctcggc gacgtgggca ccgccgcgca
     4021 ggtggatgaa acgcgcgccc gagtttacgt ggcccagcac cgatacgcgg aagctgagaa
     4081 actcgcgcag gcttccgtgt cagtgctgga acgcggcggc gagcaatcac tgctggtgga
     4141 aagcttgcag actttgggag tagcgcaagc ccgacaacaa cggcatcagg cggcgataga
     4201 gactcttcgc cgcgcagtcg aagtagctga aacggccggc gatccggaat cctcaggccg
     4261 tgcgctctta acgttggtcg aagaactcca cgcccatctt ccggcggagg aagtcagccg
     4321 cgcgtattcc gaagccgatc aaaaacttgg agaagaagtc gggcgcgaaa cattaactcg
     4381 tttgcgcgcg tgtgctcgac ttatcgggtc cgaacgatct gccctcgcgc agccggcgcg
     4441 gctcgacgcc acctttgatc aacaggtgcg tcagtttgaa agcacactga ttcgccaggc
     4501 gttggaagaa gctaacgg
//
LOCUS       DATDBY010000132         3165 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_348390, whole genome shotgun sequence.
ACCESSION   DATDBY010000132 DATDBY010000000
VERSION     DATDBY010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3165
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348390"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..821
                     /locus_tag="VIT19_02525"
     CDS             <1..821
                     /locus_tag="VIT19_02525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837882.1"
                     /translation="APIRVTSPGLTVYKGGAVTPRLYFIKQHLGDLEVDRQMLDVSVS
                     YTPSPRVQLEIEVPFSRAAFDDGITSGSGVGIGNVTAWAKYRFFRKVRTYGDTQAALR
                     FGLELPTGKKTAPTAAQINVPEFVRQQLTPINGGLSPHIDLAFSQAGGRLIFGGNAEV
                     IFRTERDGFRMGHEQRLSTDLEYVLPRDPQKPGGELFFILETTFVHRSNGRLNGVAVA
                     GSSATEYYLAPGVQYAAHPQFVVEGSYQFPVVRNTGPLALRTDRNILLGVRYLF"
     gene            829..1317
                     /locus_tag="VIT19_02530"
     CDS             829..1317
                     /locus_tag="VIT19_02530"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY5837883.1"
                     /translation="MRNLLLALFLLVTPAVTLAQAPRPAPAVVLRDLNGRTVRLTDFK
                     GKVVLLNFWATWCPPCRAEIPDLVRWQREYGSKGLQIIGVTYPPTNRRKVRSFVRAFK
                     VAYPVLLGDKKTKALFDAGETLPFSVVIDREGKVRENIEGIVLPEEFDEKVKPLLEQP
                     KQ"
     gene            1361..1648
                     /locus_tag="VIT19_02535"
     CDS             1361..1648
                     /locus_tag="VIT19_02535"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEY5837884.1"
                     /translation="MKKRRTPSLLIIAVILTVGIATVSAATRTVTIRVEGMHCQNCAA
                     SLEKKLKATAGVQAVRVSFEKKEAWVKFDDRRISVAQIREVINSTGYKAAE"
     gene            1871..2785
                     /locus_tag="VIT19_02540"
     CDS             1871..2785
                     /locus_tag="VIT19_02540"
                     /inference="COORDINATES: protein motif:HMM:NF014336.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1/P1 nuclease"
                     /protein_id="HEY5837885.1"
                     /translation="MKIENKHSAFRSRVAIGVICFILITPTLSLGWGAGGHMMTAQIA
                     FDRLNPRAKAQARRLLAIQINPAAVTRRSRNFINASHWADDLRPFPEFDSFKELHFID
                     KFFSEDGTPLPTDLPPNNIVTALEENVNILKTSTDNNARAQALRFIIHFVGDIHQPLH
                     AASRVSAALPTGDRGGNSVNLKIRQPNGTMKSTNLHSYWDGGIGTFPKTGPNFAPPPL
                     SQIPRPVASIIRTYRATDPALNLNNPTDFSGWAGESNMLAKDVAYKGITNNGTPSTAY
                     NRAATRVVRKRVAWGGYRLAALLNSIWP"
     gene            2965..>3165
                     /locus_tag="VIT19_02545"
     CDS             2965..>3165
                     /locus_tag="VIT19_02545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837886.1"
                     /translation="MFTSEAPSSQRDPEGTEHPAIVRFDELSLLSIIARMSADDIYEV
                     QRLYPQIFLACHTNHVRAATTRW"
BASE COUNT          738 a          874 c          862 g          691 t
ORIGIN      
        1 ccgcaccaat ccgcgtgacg tcgccggggc tgactgttta caagggaggc gcggtcacgc
       61 cgcgtctcta tttcatcaaa caacacctgg gcgatttgga agtagatcgg caaatgctcg
      121 atgtgagtgt ttcctatact ccgtcgccgc gagtgcaact cgaaatcgaa gtaccgttct
      181 cgcgagctgc ttttgacgac ggcattacgt cgggttcggg cgttggaatt ggcaatgtca
      241 cggcgtgggc caagtatcgt ttcttccgga aggtgaggac atacggagac acgcaggccg
      301 cattgcggtt cgggcttgaa ctgccgacgg ggaaaaagac cgcgccgacc gccgctcaaa
      361 ttaatgtgcc ggagttcgtt cgccagcaac tgacgccgat aaatggcggg ctctcgcctc
      421 acattgatct cgcgttctcg caggcaggcg gccgtttaat ctttggtggc aatgcggaag
      481 tcattttccg caccgaacga gacggatttc gcatgggaca cgaacaacgc ctcagcactg
      541 atctggagta tgtgctccca cgcgatccgc aaaagcccgg tggagaattg ttctttatcc
      601 tcgaaacaac ttttgttcat cgaagcaatg gccggctcaa cggcgtcgcg gttgccggaa
      661 gtagcgcgac tgagtattac ctggctccgg gagttcaata tgccgcgcat ccgcaatttg
      721 ttgtggaagg cagctaccag tttcccgtgg tacgaaacac gggcccgcta gctttgcgaa
      781 ctgacagaaa cattttgctt ggcgtgaggt acttgttctg aagttgtaat gagaaatctt
      841 ttgctcgctc ttttcctgtt agtcacacca gccgtgacgt tagcccaagc gccacggccg
      901 gcacccgctg ttgtcttgag agatttgaac ggacgcactg ttcgtctgac agacttcaag
      961 ggcaaagtgg tgctcttgaa cttttgggct acctggtgcc caccatgtag ggctgagatt
     1021 ccagatcttg taagatggca gcgagagtac gggtcgaaag gtctccaaat aattggggtg
     1081 acttatcccc cgaccaaccg gcgaaaagtt cgcagcttcg tgcgcgcttt caaggttgcc
     1141 tatccagtct tgttaggtga taagaaaacc aaagcactgt ttgacgcggg tgagactttg
     1201 ccgttctcag tcgtgataga ccgcgaggga aaggtgagag aaaatattga aggcattgtg
     1261 cttcccgagg agtttgacga gaaagtgaag ccattgcttg agcaaccaaa gcaataaaag
     1321 gctatcatct cagcttgaat tcagtttggg aaaaataaca atgaaaaaaa gaagaacccc
     1381 aagtttactg atcatcgccg taatcctgac tgtgggcata gccacagttt ctgctgcgac
     1441 caggactgta acgattcgcg tcgaaggcat gcactgccaa aactgcgcgg cttcgctcga
     1501 gaagaaactg aaagcgaccg caggcgtcca agccgtccgc gtcagcttcg agaagaagga
     1561 agcttgggtg aagtttgacg accgaaggat ctcagtcgcc caaatacgtg aggtcattaa
     1621 cagcactggc tataaggcgg cagagtaata gccaactcct gcggcataag aacttattca
     1681 ttcctcgccc ctccgggcta aacgtccacc ctctgcttac ccgaacggaa tacccgccaa
     1741 gtttattcgt cgcacccgca gaaacagtag tttgcaaggc cctctatgtg atatagaacg
     1801 ggcgattgca acctttatct ctacggcgac caagctctgc cgtttcacct caacctaagg
     1861 agaaagcccc atgaaaattg aaaacaagca cagcgcgttc cgaagtcggg tcgcgattgg
     1921 tgtgatctgt ttcatcctca tcacccccac cctgtcgtta ggttggggag cgggcggcca
     1981 catgatgacc gctcaaattg ccttcgaccg tctgaacccg cgcgccaaag ctcaggcacg
     2041 gaggctgctg gcaattcaga ttaatcccgc cgcagtcacc cggcgcagca gaaacttcat
     2101 caatgcgtcc cactgggctg acgatctgag gccgttccct gaattcgatt cgttcaagga
     2161 gcttcacttt attgacaagt tcttttctga ggacggcacg cctctgccga ctgacctgcc
     2221 accaaacaac atcgtcacgg ccctggagga gaacgtaaac atcctgaaga ccagcaccga
     2281 caacaatgcg cgcgcgcagg ccttgcgctt catcattcat tttgtcggtg acatacatca
     2341 acctttgcat gccgccagcc gtgtcagcgc ggcgttgccg actggcgatc gcggcggcaa
     2401 ttcggtgaat ttgaaaattc gccaaccgaa cggcacgatg aagagcacga atctgcacag
     2461 ctattgggac ggagggattg gcacgtttcc caaaacgggg ccaaacttcg ccccgccgcc
     2521 gttgagccag attccacggc ccgttgcttc gataattcga acatatcgcg ctacggaccc
     2581 ggcgctgaat ctcaacaatc caactgattt ttccggttgg gccggtgaaa gcaacatgct
     2641 ggcgaaggat gtggcttaca aaggcatcac gaacaacggg acaccgagca cggcctacaa
     2701 ccgcgcggca acgcgcgtcg tgcgcaaacg tgttgcgtgg ggcggctatc gcctggcggc
     2761 gctgcttaac tcaatctggc cgtaagtgtc agcggctctg ccgcagcaca tagcggtaag
     2821 cttctggctt accggcgagg cgctctcttc ttggagaatc cttgaggctg agcctcagga
     2881 tgaatttgag cactctctgt ccggtaaggc aaagccttac cgccatgtgc tgcgccgaag
     2941 gcgcaactgt agttctggtc cggtatgttc accagcgagg caccgtcgtc gcaacgcgac
     3001 ccggagggaa cagagcatcc cgcaatcgtt cggtttgacg aactatcgct gctttctata
     3061 atcgcgcgca tgagcgccga tgacatttac gaagtgcagc ggttgtatcc ccagatcttc
     3121 cttgcctgcc acacgaatca cgtgcgcgcg gcgacgactc gctgg
//
LOCUS       DATDBY010000133         3860 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1325196, whole genome shotgun sequence.
ACCESSION   DATDBY010000133 DATDBY010000000
VERSION     DATDBY010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3860
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1325196"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..817)
                     /locus_tag="VIT19_02550"
     CDS             complement(<1..817)
                     /locus_tag="VIT19_02550"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5837887.1"
                     /translation="MKILLSVLAVFLFALAPASIQPSQTADLIFTNGNVYTVTEKQPH
                     AQAIAVKGDRIVFVGTNAAAKRFQGKSTRVVDLRGATVVPGLADAHAHFTGVGQREMN
                     LNLEGITTLEEFLAKVKERVDQAKPSEWVTGRGWIETFWKPPVFPTRADLDKVAPNNP
                     VFLTRADGHASVANSAAIKIAGVTKDTKDPFGGQVLKDKQSGEPTGMLIDTAQGLVAG
                     HIPQRGASSAEEAMVLANKRSLELGWTQIHDAGGSYREVELFKKLYGEGKLKIR"
     gene            1008..1679
                     /locus_tag="VIT19_02555"
     CDS             1008..1679
                     /locus_tag="VIT19_02555"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY5837888.1"
                     /translation="MRVDSLPIDTTAGPTTAYVDRPVEDTNTAVLLIHEWWGINQHIR
                     DLARRYTEEGFNCVAPDLFRGRVAQDVKEASALMDGLAIEDGLETIHKAMDAVRDKYG
                     FDQFVINGYCMGGTFALHAACHIPEMKAAAPFYGDIPEEEVLKKLTVPTLFIAGKRDA
                     WINEAKVKGLKEVATKHDLPVEVVSYDADHAFFNDTRPEVYDPEAAQDAWQKVLNHLK
                     HYTTQ"
     gene            1879..2382
                     /locus_tag="VIT19_02560"
     CDS             1879..2382
                     /locus_tag="VIT19_02560"
                     /inference="COORDINATES: protein motif:HMM:NF020177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1772 domain-containing protein"
                     /protein_id="HEY5837889.1"
                     /translation="MDTRRNIVRTLIWISTLGWGIVFGGLFLETAFIVPLWSGALPGS
                     LTTWNVNPHHVFDPTRFYWIFTSSTVLATTGTWILGGKLVRPQWKWLAISSTCALAAI
                     FYTFIYFLPRNVWLFQRHGSGLTAEQITTLANRWVVANWVRLSIIGIGFVSALAFFRK
                     SLIDSRS"
     gene            2466..3323
                     /locus_tag="VIT19_02565"
     CDS             2466..3323
                     /locus_tag="VIT19_02565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837890.1"
                     /translation="MKSYNLIGYLLIALTALGGALFAPDGWGPWLGLAFSFGYLLLIW
                     FFGGLYLTDIIHMGIAHKTLDYRPVFMKLVVLLWNTAGIYINPITWVNRHRHHHAFSD
                     HSGDPNKLDEDGFWRTMYLCIFPYPCRSNLAKDSIFQSWPFRLVSNPYFAVFSQLASY
                     GILWWLVRDWKYALMLWCAVRVFALWINMIQNYWTHDRRFGRRLYNDPGDNAVNLDEW
                     LPVTASFSASLQNNHHHFPHFMRTSHDSQQYDLGLLTVRVMNRMGLVKASPTGAQVPK
                     GIPLTEIGL"
     gene            complement(3506..>3860)
                     /locus_tag="VIT19_02570"
     CDS             complement(3506..>3860)
                     /locus_tag="VIT19_02570"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEY5837891.1"
                     /translation="NTVYVIGSKMMSTELGELSERVNATYLNMQLDYRYDDPADPNRF
                     FFRSDHINYARKGIPIIFYFDGVHEDYHRPGDEPQKIDYEKMQRVTRTVYVTLWEIAI
                     RPTRPKVDKQLPAGT"
BASE COUNT          808 a         1071 c         1037 g          944 t
ORIGIN      
        1 ggcgaatctt cagcttgcct tcgccgtaaa gttttttgaa gagttcgacc tcgcgatagc
       61 tgccgccggc gtcgtgaatc tgcgtccagc caagttcgag gctgcgttta ttcgcgagca
      121 ccatcgcctc ttcggcgctg ctcgcgccgc gctgcggaat gtgtccggcc accagaccct
      181 gcgcggtgtc gatcaacatc ccggtcggtt cgccactttg tttgtctttc aggacttgtc
      241 cgccgaaggg atctttcgtg tctttcgtta cgcccgcgat ctttattgct gcgctgtttg
      301 cgaccgaggc gtggccgtcc gcgcgcgtga gaaagacggg attgttcggg gcgactttgt
      361 cgagatcggc tcgcgtcgga aacaccggcg gcttccagaa cgtttcgatc caaccgcggc
      421 cggtgaccca ctcgctgggc ttcgcctgat cgacgcgctc tttaactttg gcgagaaact
      481 cttccaaagt cgtgatgccc tcgagattca agttcatctc gcgctgcccg acgccggtga
      541 agtgcgcatg cgcgtcagca agtccgggaa cgaccgtggc gccgcgcaga tcgacgacgc
      601 gggtgctctt tccctgaaat cgcttcgccg ccgcattcgt gccgacgaac acaatccgat
      661 cgcccttcac ggcaatcgct tgcgcgtgcg gctgtttctc ggtgacggtg taaacgttgc
      721 cgtttgtgaa aatcaggtcc gctgtttgcg acggctgaat actcgccggc gccaaagcga
      781 aaaggaatac agcaagaact gataatagga tcttcatgtt gcctctcagg tggtccgtga
      841 atcgcgcgag cgccggtttt tatatcacag tgttactttg cagtcacaaa acggcgcgct
      901 gccatttatt cgacacacgc cgtcctctat aatccaactc accgtaataa caattagcga
      961 accgcctgag cagccggggc gcagtttctg ccggaaggag cagcagcttg agagttgatt
     1021 cactgccgat tgataccacc gccggtccga ctactgccta cgtagatcga cctgtcgaag
     1081 atacgaatac cgccgtcctc ctgattcatg aatggtgggg catcaatcaa cacattcgcg
     1141 atctcgcacg tcgctataca gaggaaggtt tcaactgcgt cgctcccgac ctgtttcgcg
     1201 gacgcgtcgc gcaggatgtc aaagaggcat cagcgctgat ggatgggctc gcgatcgaag
     1261 acggcctgga gacaattcac aaggcgatgg atgcggtgcg ggacaaatac ggcttcgatc
     1321 agtttgtgat caacggctac tgcatgggcg gcacttttgc gctgcatgcc gcttgtcaca
     1381 ttcccgaaat gaaagctgcc gcgccgtttt acggggacat tcccgaggaa gaggttttga
     1441 agaagctgac ggtgccgacc cttttcatcg ccggcaaacg cgacgcgtgg atcaatgaag
     1501 cgaaagttaa aggcttaaaa gaagtggcga cgaaacatga cttgcccgtt gaagttgtca
     1561 gctatgacgc cgatcacgcg ttctttaacg acacgcgtcc cgaggtgtac gaccctgagg
     1621 ccgcgcagga tgcgtggcaa aaggtcctca accatctcaa gcactacacc acccaataag
     1681 ctgaagttga accgcggttg ggcctccaca cccttttcta ttgacttcaa aataagacag
     1741 gaatatgctt cgcccgcctc gcaagatcgc ttactgaaat cgagttcgac acactctaga
     1801 ctcgcgactc ggaactcgaa actctttatc aagctggatc ctggccatca gctgaggtcg
     1861 gtggaaggag gaaccgggtt ggacacccgt cgcaatatcg tccgtactct aatttggatt
     1921 tccacgctgg gctggggcat tgtgttcgga ggtctcttcc tggaaacagc cttcattgtg
     1981 ccattgtgga gtggggcgtt gcctgggtct ctgacgacat ggaatgtcaa tccccatcac
     2041 gtcttcgacc caactcgttt ttattggatt tttacgtcct cgaccgttct tgccactaca
     2101 ggaacctgga ttctcggcgg gaaacttgtc aggccacaat ggaagtggct ggctatatcc
     2161 tcgacctgcg cgctggcagc tattttctac accttcattt attttcttcc cagaaatgtg
     2221 tggttgttcc agagacatgg aagtggtctc accgccgagc agatcacgac gttagccaat
     2281 cgctgggtgg tagccaattg ggtgcggctg agtattatcg gcataggctt cgttagtgcg
     2341 ctggcttttt tcaggaagtc attaatcgac tcccggtcat gatctataac ctcgacaggc
     2401 ggatcatcga ctgacacccc ttaacctcat tgcagcgccc attcccggcg cgaaaggaga
     2461 tagtgatgaa aagctataac ttaattggat acttgttgat tgcgctcacc gcgctcggcg
     2521 gggcgctttt tgctcccgat ggttgggggc catggctcgg tctcgcattt agctttggct
     2581 acctcctctt aatctggttc tttggcgggc tttacctgac ggatattatt cacatgggaa
     2641 tcgcacacaa gactttggac taccggccgg ttttcatgaa gctggtcgtt cttttgtgga
     2701 acacagccgg tatttacatc aatccgatca cgtgggtgaa ccggcatcgc catcaccacg
     2761 ctttctctga tcactccggc gatcccaaca agttagatga agacggcttc tggaggacga
     2821 tgtatctctg catctttccc tacccgtgca gatcaaatct ggccaaggat tcgatcttcc
     2881 aatcctggcc tttccgtctg gtgtcgaacc cctacttcgc ggtgttttcc cagctcgcca
     2941 gttacggcat tctgtggtgg ctggtaagag actggaaata tgccctgatg ctttggtgcg
     3001 ccgtacgcgt tttcgctctt tggatcaaca tgattcagaa ttattggact cacgatcgcc
     3061 gcttcggccg gcgactttac aatgatccgg gcgacaatgc tgtaaacctc gatgaatggc
     3121 tccccgtcac cgcgtcgttc agcgccagcc tgcagaacaa tcatcatcac ttcccccact
     3181 tcatgcgcac cagccatgat tcacagcagt acgacctggg tctgctcaca gtgcgggtga
     3241 tgaatcgtat ggggctggtc aaagcctcac ccacgggtgc gcaagtgcca aaagggattc
     3301 cgctgacgga gattgggctc tgaagcgcgt ttagattttt gttgccggag aatccgagaa
     3361 cggccgcgca gttcaaactt tcacgacgtt atcggagtgt cgtacgcgga agttacgatc
     3421 gaagagtacg agccgataca acaacgagcg gtgagacgcc ggtgaggaac taaactcttc
     3481 tcgttttgca ctttgtgcaa ccggttcagg ttcccgccgg caactgctta tcgactttcg
     3541 gacgcgtggg gcgaattgcg atctcccaca gtgtcacgta aacagtccga gtcacccgct
     3601 gcattttttc gtagtcgatc ttttgcggct cgtcaccggg ccggtgatag tcttcgtgca
     3661 cgccatcaaa gtagaagatg atgggaatgc ccttgcgcgc gtagttgatg tgatcgctac
     3721 ggaaaaagaa gcgattcgga tccgccggat cgtcgtagcg ataatccagt tgcatgttga
     3781 ggtaagtcgc attgacccgc tcgctcaact cgcccagttc agtgctcatc atcttcgagc
     3841 caatgacgta aaccgtgttc
//
LOCUS       DATDBY010000134        15459 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2759381, whole genome shotgun sequence.
ACCESSION   DATDBY010000134 DATDBY010000000
VERSION     DATDBY010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 15459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15459
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2759381"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            285..2159
                     /locus_tag="VIT19_02575"
     CDS             285..2159
                     /locus_tag="VIT19_02575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837892.1"
                     /translation="MGRLCLLSLLLLLVISPIAAAQSAEPGKPSPSDIAKAKDENETE
                     AERLLRERRANAQSLLISLAADAGNYTDQRLRARTMARIADALWDADPERGRAMFRKA
                     WDAAEAVDAESRRITQEEIRQQQAQRGSAAVANRGSIRNEVLRLAARRDRKLGEEMLA
                     RLTAEKKEEATEAADKARSNVFETPEAITQRLNLARQLLDSDVERSIQFADPALMTVT
                     RDGIDYLSYLREKDEVAADRRFAALLARAGGDAKTDANTISLLTSYLFTPHIFVQFNG
                     GGANTSSTGRTTPAPVVAAELRAAFFRTAAEVFLRPLAPPGQDQTTSGLVGKYLMMKR
                     LMPLFEQFAGKETTDAVRAHMEALANTVSEGDRLRDDESMREGIRPLENTEDQEKSLL
                     DKIDRTKPGDQRDQLYLQLARLYSQNGDMRAREIVEKVEDTDVRNQVRVFTDATLVSR
                     DIEKKDADRVLEIVRIGSLTLIQKTWALTQAAKLIYKTDLDRALSLLEQADTEARRIE
                     TSDADRPRALMAIANTYLLVDRKKAWDQIADVTKAANSAPTYTGEDGQLRFTLLTKGM
                     SSIRSATVREFDVAPVFTDLANEDYARIIELARLFEKEGPRASATIAIAKAMLEEKKK
                     "
     gene            complement(2339..3082)
                     /gene="bshB1"
                     /locus_tag="VIT19_02580"
     CDS             complement(2339..3082)
                     /gene="bshB1"
                     /locus_tag="VIT19_02580"
                     /inference="COORDINATES: protein motif:HMM:TIGR04001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis deacetylase BshB1"
                     /protein_id="HEY5837893.1"
                     /translation="MTESTQLDVLAVFSHPDDAELTMAGTLLKLKSLGYRTGIADMTR
                     GEMGTRGTPEIRAKEALDAARVMNLDARVNAGLPDGHLALNEESKLAVVRILRKYRPQ
                     VVFTGHWDDPHPDHAATAHIVREAARLATMRRYDKEGGLEAIKMPAIAHAVYSRLVVP
                     SFIVDVSEFAEKKMEAIRAYASQFYLADSSEPETRIAQKGFLRQIADRARYYGSLIGV
                     EDGEPFYVREALNVEDPFALLTRPMNIYS"
     gene            complement(3279..4166)
                     /locus_tag="VIT19_02585"
     CDS             complement(3279..4166)
                     /locus_tag="VIT19_02585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837894.1"
                     /translation="MNRPRALLIASLSSALLSAALFLAPAKAQKDKKPPVPAAAHIKR
                     TIHRRATHRLPYGGSVTLVAPPVSSITIEGWSRSEIEIEADIELQAPTEADLDLLAAI
                     NNMAIDVDTNHVRILTSGTHDKKYLQRVAKKFPKTLIGLPWKIDFRLKIPALTDIDID
                     SGIGPIKLSGVEGSIRLEALQSDAELTLTGGYFSGLIQRGAVKVTIPSRNWRGLGATL
                     QLAGGTLEVILAPGFSGDVDANILRLGEIKNSYAGLTPREGTANNPRLLLGRAGAGGA
                     KLSFTVGDGPLEIKSSGGP"
     gene            complement(4202..4951)
                     /locus_tag="VIT19_02590"
     CDS             complement(4202..4951)
                     /locus_tag="VIT19_02590"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HEY5837895.1"
                     /translation="MNQRPLARIAKRITPVIFVVLILTVAAFAQKSVSRKFPAGKNVR
                     LELKNLSGTITVESWNRDEIKITASMDAPTVHFNPRQTEGGLVIDIVGDNRGRSDVGD
                     VNFKVQVPARSSVDLETRRGQINVSNIQGDLVRAHVWTSGDIQLYGINAGRVFASNST
                     GDVFFDGEFASGGTYEFKSGQGTITLQLPVNCGFRLVATAPAQKISMGKFWNPNMKTV
                     GEGRRIIGDVGDGRASVTATTYQGNINFRVR"
     gene            complement(4989..5681)
                     /locus_tag="VIT19_02595"
     CDS             complement(4989..5681)
                     /locus_tag="VIT19_02595"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEY5837896.1"
                     /translation="MNCEKYQNLLSDLIDGSLTPRDCDDIEAHLKGCPSCADTRTDLH
                     GIVEFCREHRGEYDAVPSERAMWLRISNTIEAELAAGKSKALPAGTGWWFRLTNRSWQ
                     LSFPQFATSIAATVVVAVLATVIGMRVLNTGGFRSSGLPVTSGVVTVKDRYRQQQQTI
                     DYWNKRVALNKARWNPDMRETFDRNLNVIDAAVDDSMGRLQQNPHDEVSEDILNAALS
                     DKIALLKEFAEL"
     gene            complement(5873..6502)
                     /locus_tag="VIT19_02600"
     CDS             complement(5873..6502)
                     /locus_tag="VIT19_02600"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEY5837897.1"
                     /translation="MGRATLQTDRSAHTKELVAAIDTETPRTPDYELTKRAAEGDMKA
                     FEDLYQRHNRRVYSLCLRMTGNVVEAEDLAQEVFIQLFRKVGSFRGESAFTTWLHRLT
                     VNQVLMHFRKRGVRLEQTTEEGEVPVQIVKGTENPNAMPVVDRIALDRAIAQLPPGYR
                     TVFTLHDIEGHEHEEIARMLGCSVGTSKSQLHKARMKLRGLLRQQKKPH"
     gene            complement(6794..9049)
                     /locus_tag="VIT19_02605"
     CDS             complement(6794..9049)
                     /locus_tag="VIT19_02605"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HEY5837898.1"
                     /translation="MRRPAKLVALASLLISAAVCGLLIAPALLPGSTATSSAGPSPSP
                     TASPTPLESPTASPTPVESPTASPTPEGPQTVTIPGEPEPIARVETIVTKGDQLPTAD
                     ITEAKIIRVSGRAAEPAVTTVNLFSGDEIETGANTYVTVIFLEGALERENEIIIYPDS
                     KITVGSGWTWWGRAFYRVRGWLSAGSDNVAGGSGGTEFTVTVCKENIKPIWCQAKDGS
                     PPSNGTDVTVLDDNVDALIYDVAIDTTSDNASQVSRTITIRSRKPQCRKTHLYELEAP
                     DNMPWLEFLPRSVLLRPGREATFIPRIVRRPDRPDPEPGEYKGKVEIKCSDCADREPN
                     CEFDTTIGGATLPIAVKVRQVKVEKRQQIDVREKQLDEPKPQVIPEEEAKVLVDKTSD
                     VILSTQPRIAAPNVMQNYSDEERKVIFKQARAAALVRNEPEGYRDMGKVNVDWGKGAK
                     ALEALEKVPESSIDKKTADFPSNLAEAYRLTDDLEKAQEQIEVAKSRLTGDVPATVRV
                     MTVQGNIYFDRARGALKMYEQSKDKRLLTTADTYLIQAQQFYIRAVKPVGISMQPQLE
                     SVPLRNLGDAYRLQGETLISRKATAQEINVANENALSAYTKALTLNPGDRNARKGQGY
                     GLLQKAASTQSDFDKTSLIRRAREDFARAIAEDSKDSQALVGRSLANAELGEKNQARR
                     DLQDAIQQYQGASLVLVPDVTGKPKAVAALELVGVKLEPVFTGKGTVVIDQSPKRARV
                     KRGTKVTLRLG"
     gene            complement(9073..11652)
                     /locus_tag="VIT19_02610"
     CDS             complement(9073..11652)
                     /locus_tag="VIT19_02610"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE2 domain-containing protein"
                     /protein_id="HEY5837899.1"
                     /translation="MIYRDFDLWIDSDGNNRCLIRAEAPTAAQGEFRLDETAYDVLIN
                     TAATAEKTSVKSAAEDLFNHTFPAEVGRLYQQCVGGAVERDVGIRLRLRTNTERVAEI
                     PWELMSDGKHFLGASTKTVVIRYLPGVVPPLEIKPLVNVLILSPQESGATSVAATIAD
                     ALREFEPMVAVHFKPGELTSTAIRDALRERKYQIVHFVAPVRYSETREPRLAIDGDVG
                     SELDADAISLFFEGDHPTKLVILNSVASDVTSNPGTLFPIAARLVTDSLPAAVAFRHP
                     LNELAARLFARELYLSLCRGDDHGRVDVAVACARRSLCQQFPNRIDFIAPVVFTRSGS
                     GKIFSFPDEKKATVESVRQLHTAQTVVDTHDANREIFEQQKNDAGPEEKAQIQEQIDA
                     ESAAAKPTAEQIRRWRKKVIIRSALATLGILAACWIGLFGVLNLDEYLERKFVSFMDS
                     SIEKPIAPQLRMITIKEGEKNGNFEVLQGEDAKWRANYAKLIRDLAQAGAKTIVLDVF
                     FDNKQLTPEENEATDKLLAAVSYAQQPKQIGEQTKQTGVIAAVKTEQGKIVTEMPDQL
                     KQLFAGYRGDASNLRRQWWSRLIREVRLATVSPDVSAAGCADGETAVLPSLPLLAVMH
                     FRGATKACLGADQNEIRVRDDSQNLIKSVPVFSRYSRSGETLMVNKLDLTPASKISDF
                     SKPIEKLYNDQQTLARPGDYADSIVVIGVTRQGECFGPDERDIWCVTDSEPGERNGKR
                     FGVEIQANVISNLLTDIYINPVSISVDLLLIALMVGLGVVFQTVGRSWLNEPIAIPIP
                     GTNSSVPIPVLLFVVSGIYLFLIFVAYQKSRLLFSNAPYHILALVVSYYMMRRLRKRL
                     ALK"
     gene            complement(11859..13424)
                     /locus_tag="VIT19_02615"
     CDS             complement(11859..13424)
                     /locus_tag="VIT19_02615"
                     /inference="COORDINATES: protein motif:HMM:TIGR00368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEY5837900.1"
                     /translation="MLFRALSAAVYGIDANLVDVEVDLTPARNEVDQTPAVIVVGLPD
                     AAVRESRERIRAAINNSGFFFPFHKTTINLAPADVRKEGASFDLPIALGILGANGDLG
                     NAEHLTDILSVGELSLDGRVRSIRGALPIALRARQSQAKHLLLPDENAKEAAVVSDVN
                     VYAVTDLRNAVETIAGLRSENPPSPIRVDSSQLLSPTDHYSVDFREVRGQQAAKRALE
                     VATAGGHNILLIGPPGSGKTMLTKRLPTILPPLEFEAALELTKIHSVAGLTGRAGLVS
                     ERPFRSPHHTISDAGLIGGGAVPRPGEVSLAHQGVLFLDELPEFDRSVLEVLRQPLED
                     QRVTISRAAMSLTFPSSFMLAAAMNPCPCGYWNDPTHECNCSPLQIQRYVGRISGPLL
                     DRIDIHIDVPAVKFRELTGDPPPDAEDSKAIRQRVIRARAHQGERLAADGIYSNAAMS
                     PRLIRKYCRIDSESETMLERAMARLGLSARAYDRILKVSRTIADLDDSDDISSAHVSE
                     AVHYRSLDRTYWT"
     gene            complement(13593..15326)
                     /locus_tag="VIT19_02620"
     CDS             complement(13593..15326)
                     /locus_tag="VIT19_02620"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEY5837901.1"
                     /translation="MTRKAVPVFSSVLFAVALFTPAVIQAQGPAGSSARDIQTEVQKN
                     EPRVDQIIERANDHFRKGKLNLEDNKREQARDEFDKAVDAILMSGMDVRSSQRLQTYY
                     LELVERIYREEVPLTQVAPNATTVVAQAPANANAEIVEVAQAQPKQQQIGFVQQGFEP
                     SPLDALSKLILTEDEKTVTAEQLATSEQVKNSLDFKFTMNPLVQQYINFYQGRGGRNT
                     MESGLRRSGRYMKIARDAFRKAGVPEDIVWLGQVESAWQPRAKSWAAASGLWQFIGST
                     GAAYGLRQTAWVDERNGIEKPTSASARHLKDLANRYNGDWLLAMAAYNTGAGNVDRAI
                     SRAGEANFWKIYPYIAQETRNYVPNILAVILIAKNPEKYGFNNVRPDAPMSFDPVPVP
                     SATSLRLIAEATDTSLDHIQILNPELKRDTTPRGEPFTVRVPAGRGKQLASLLKRVPG
                     DRRDTARVISVAPGEEWQSIANRTGVSVSTLQSMNAGVDLNNATKLFVPNSTIRLTNW
                     KRSADTPGASLTRVKARKGDTIARIAAAHKLSADEVARLNGIAPNTALQAGQEIKLPS
                     AGSTSAPTSRR"
BASE COUNT         3297 a         4430 c         4252 g         3480 t
ORIGIN      
        1 tgacggcggt tatctggaaa tcatcgacct gaaagaccag acactgacaa tccgttacca
       61 gggcgcctgc ggcagttgtc cgagttctct gaccggcaca ctcatgtcca tcgagagcat
      121 gctcaagact gaagtcgatc ctgaattgga agtcgtcgcg gtgtaggttc attccctctc
      181 cttctgggaa gagggaggca aactatcgga accatccttc tcctcgacgc gttttgatca
      241 tcaccacagg ttcgtccgac agacttttcc ggagaattca aaaaatgggc cgactctgcc
      301 tgctttccct gctgctgctt cttgtcattt cgccaatagc ggctgcccag tctgccgaac
      361 cgggcaaacc ctcaccttcg gacattgcca aagcaaagga cgagaacgag accgaggccg
      421 aacgcctgtt acgtgagcga cgcgccaatg cccagtcgct tctcatctcg ctggcggccg
      481 acgccggcaa ctacaccgac caaagattgc gcgcgcggac gatggcccgc attgctgatg
      541 cactttggga tgccgatccc gagcgcggtc gcgcgatgtt tcgtaaggca tgggacgccg
      601 ccgaagccgt cgacgcggaa agtcgccgta tcacacaaga ggaaatccga cagcagcagg
      661 cgcagcgcgg cagcgccgcc gtcgccaacc gggggagcat tcgcaacgaa gtgctgcgtc
      721 ttgcggcacg acgcgatcga aagctcggtg aagagatgct tgccaggtta acggcggaga
      781 agaaagaaga agcgaccgaa gcggctgata aggcgcgttc taacgtgttc gagacacctg
      841 aagcaatcac tcagcgtttg aacctcgcgc ggcaactgct cgacagcgac gtcgaacgtt
      901 cgattcagtt cgccgacccg gcgctaatga ctgtcacgag agacggcatc gattatcttt
      961 cgtacttaag agagaaagac gaagtcgctg ctgaccgtcg atttgcggcg ctgttggccc
     1021 gcgctggcgg cgatgcgaaa acggacgcga acacaatctc gcttctgacg tcctatctat
     1081 tcacgccaca catcttcgta cagtttaatg gcggaggcgc aaacacatcc tccaccggcc
     1141 gaacgactcc ggcgccggtg gtcgcagctg aactgcgcgc ggcttttttc cggaccgccg
     1201 cagaggtctt tctcaggcct ttggcaccgc ccggacagga tcaaaccacg tccggcctcg
     1261 tcggaaaata cctcatgatg aagcgcctca tgccgctctt cgagcaattt gccggcaaag
     1321 aaacaaccga cgccgtgcgg gctcacatgg aagcgctggc gaatactgtt tccgagggtg
     1381 accgtttgcg ggacgacgaa tctatgcgcg aaggaattcg tccgctcgag aacaccgagg
     1441 atcaggagaa gtcgctgctg gataaaatcg atcgcacaaa gcccggtgat caacgcgacc
     1501 agctttatct ccaactcgca aggctttaca gccagaatgg cgacatgcgc gcgcgtgaga
     1561 tcgtcgaaaa ggtcgaggat acggacgtcc gcaaccaggt gcgtgtattt accgacgcca
     1621 ctctggtcag tcgcgatatc gagaaaaaag acgcagaccg cgtgcttgaa attgtgcgca
     1681 tcggctcgct gacgctgatt caaaaaacat gggcgctgac gcaggcggcc aagctgattt
     1741 acaagactga cctggacagg gcgctgtcac tccttgagca ggcagacaca gaagcaaggc
     1801 gaatcgaaac ttccgacgcc gatcgtccac gagcactgat ggctatcgcg aacacttacc
     1861 tgttagttga tcggaagaag gcctgggacc agattgcgga tgttacgaaa gcagcaaact
     1921 cagcgccaac ttacactggt gaagacggcc agttgcgctt cacgctgctg acaaaaggta
     1981 tgtcttcaat tcgcagcgcc accgtccgag agtttgatgt cgcaccggtg ttcaccgatt
     2041 tagcgaacga ggactatgcc cgcatcatcg agctggcccg gctatttgag aaagaaggcc
     2101 cgcgcgccag cgcgacaatt gcgattgcca aagcaatgtt ggaagagaag aagaaatgaa
     2161 agaccgtcag tggtccgttg tcagttgtac gattgttagt acttggtact tcgtacttgg
     2221 tactgtgatt tctcatccag acccgcgcct caatttagag gtgctctgga cgagacatca
     2281 aagcacaaag aactaagcac aaagaacaac tgactacgga caactgacca ctgacgtctc
     2341 acgaatagat attcatcggc cgggtcaata gcgcaaacgg atcttccaca ttgagtgcct
     2401 cgcgaacata aaacggttcg ccatcctcaa cgccgatcaa agacccatag taacgggcgc
     2461 gatcagcgat ctgacgcaag aaccccttct gcgcaattcg cgtctctggt tcgcttgagt
     2521 cggcaaggta gaactgcgag gcgtacgcgc ggatcgcttc cattttcttc tcggcaaatt
     2581 cagacacatc gacgatgaac gagggcacca cgaggcgcga ataaactgcg tgagcgatcg
     2641 ccggcatctt gatcgcctcg agaccgccct ctttgtcgta tctacgcatc gtcgcgagcc
     2701 gcgcggcctc tcgcacgatg tgcgcggtcg ccgcatgatc cggatgcggg tcgtcccaat
     2761 gccctgtgaa aacgacttgc ggacgatact ttctcaaaat acggacgacc gccaacttac
     2821 tctcttcgtt cagggcgaga tggccgtcgg gcaaacccgc attcacccgc gcatccaggt
     2881 tcatcacgcg cgctgcatcc agtgcttctt tcgcgcgaat ctcgggcgtg ccgcgggtcc
     2941 ccatttcgcc gcgtgtcata tcagcgatgc ccgtgcggta gccgagcgac ttcagcttga
     3001 gtagtgtgcc ggccatcgtt aactcggcat catcaggatg cgaaaagacg gcgagcacgt
     3061 cgagttgagt ggattcagtc acgaaagaaa gctaattgaa aaatgaaaag tgcaaattga
     3121 aaagtgcaaa ttaaccaact gatcttttgt ctttggtttc ggacttggtt tgctctccgt
     3181 cgggctaatc gccgtcaaag acccaaaacc aaaggccaaa gaactgattt gcaattttca
     3241 atttctaatt ttcaatttgc aatttcttgt tactcgcctc acggcccacc actcgacttg
     3301 atttcgagtg ggccgtctcc aaccgtgaac gacagctttg ccccgccggc gccagcgcga
     3361 cccaacagca atcggggatt gttcgcagtc ccttcgcgcg gcgtgagccc ggcgtacgaa
     3421 ttctttatct cgcccaggcg taagatgttt gcgtcaacgt cgccactgaa accgggcgcg
     3481 agtatgacct cgagagtacc gcccgctaat tgcaaagtcg cgccgaggcc gcgccaattg
     3541 cgcgagggaa tcgtgacttt caccgcgccg cgttgaataa ggccggaaaa atagccgcca
     3601 gtcagcgtca actcggcgtc gctttgcaaa gcctcgagtc ggattgaccc ttcaacccca
     3661 ctgagcttta tcggcccgat gccggagtca atatcgatgt cggtcagcgc gggaatcttc
     3721 aggcgaaaat cgatcttcca cggcaagccg atgagcgtct tgggaaattt cttcgccact
     3781 cgttgcaggt atttcttgtc gtgcgtgcct gaagtcagaa tgcgcacgtg attggtgtct
     3841 acatcgatcg ccatgttgtt aattgcggcg agtagatcca aatccgcttc ggtcggcgct
     3901 tgcagctcga tgtccgcctc gatctcgatt tcactgcgag accagccttc gatcgtgatc
     3961 gagcttaccg ggggcgctac cagcgtcaca ctgccgccgt atggcaagcg gtgtgtcgcg
     4021 cggcgatgga ttgtgcgttt gatgtgggcg gccgcgggca cgggcggttt tttatctttc
     4081 tgtgccttag ccggcgccag aaaaagcgca gccgataata aagctgagct cagcgacgcg
     4141 attagcaatg ctctcggtct gttcactgaa gcggattgtg cgggagaagg aaagagtttg
     4201 tctagcgaac gcggaaattg atgttgcctt gataggtcgt ggcggtgacc gacgcgcggc
     4261 catcaccgac atcaccgatg atgcgacgac cctcaccaac cgttttcatg tttgggttcc
     4321 agaacttacc catcgagatt ttttgcgcgg gcgcagtcgc gaccaggcgg aaaccgcagt
     4381 taaccggcaa ttgcaaagtg atcgttccct gacctgattt gaactcgtag gttccacctg
     4441 aagcaaactc accgtcaaag aagacatcac cggtagagtt cgaggcaaac acacgccctg
     4501 cgttgatccc gtaaagctga atatcaccgg aagtccaaac gtgcgcgcgt accaggtcac
     4561 cctgaatatt gctcacattg atttgcccgc ggcgtgtttc cagatccacg gacgaccggg
     4621 cgggcacttg aactttgaag ttcacgtcgc ccacgtcgct gcggccacgg ttgtcgccca
     4681 cgatgtcgat caccaaacca ccctcggttt ggcgcggatt gaaatgcacc gttggcgcgt
     4741 ccatcgacgc cgtgatcttg atctcatcgc ggttccacga ctcgacggta atcgtgcccg
     4801 aaagattctt cagttcgagc ctgacgtttt tgccggccgg aaatttccgc gacacgctct
     4861 tctgcgcaaa cgccgccacc gtcagaatca gcacgacgaa aatgactggc gtaatgcgtt
     4921 tggcgatgcg ggctagtggg cgctggttca tcacaatcgg gtctgctttc aactctactg
     4981 ccgggggatt atagctcagc gaactctttc aacaatgcga ttttgtcgct caacgctgcg
     5041 ttcagaatat cttcggaaac ttcatcgtgg gggttctgct gcaatcttcc catcgaatcg
     5101 tcgacggcgg cgtcgatcac gttcaggttg cggtcgaatg tttcgcgcat gtccggattc
     5161 cagcgcgcct tgttcagtgc aacgcgcttg ttccagtaat caatggtctg ctgctgctga
     5221 cgatagcgat ctttaaccgt gacgacaccg gaagttaccg gcaggccgct cgaacgaaag
     5281 ccgccggtgt taagaactcg catcccgata acggtggcca gcactgccac gaccacggtg
     5341 gccgcgatcg aggttgcaaa ctgcggaaac gaaagttgcc agctgcgatt cgtcagtcgg
     5401 aaccaccagc ccgtgcccgc tggtaaagcc ttcgatttgc ctgcggctaa ttcagcctca
     5461 atcgtgttgc tgattcgcag ccacattgcg cgttcgctcg gcaccgcgtc gtattcacca
     5521 cgatgctcgc ggcaaaactc gacaatgccg tgcaggtcag tgcgcgtatc ggcgcagctc
     5581 ggacaccctt tcaaatgcgc ttcaatgtcg tcgcagtcgc ggggagtgag cgacccgtca
     5641 atcaggtcgc tgagtagatt ctggtacttc tcgcagttca ttgtcttaac ctctgatggg
     5701 tcgcatctct gaataaagcc tcggacgaca cgactatcgc gatgtctaaa gcaataaagg
     5761 ggagactgcg tagggtctga agcgccacgt cagcgggact cgcggggctc ctgcctgtca
     5821 atttggccga tttcgccgat ttcccgaaaa aatcgggcca agttcttggt tgctagtgcg
     5881 gctttttctg ttgcctgagt aatccacgca atttcatgcg cgccttgtgc agttgcgact
     5941 ttgatgtccc aactgagcaa cccagcatcc tcgcaatctc ttcgtgctcg tgtccttcaa
     6001 tatcgtgcaa agtgaaaacc gtccggtaac ccggcggcaa ctgcgcgatc gccctgtcca
     6061 aagcgatgcg gtcaaccacg ggcatcgcgt tcggattttc ggtgcctttc acgatctgca
     6121 ccggaacctc gccctcttcc gtagtctgct cgagccgcac gccgcgtttg cggaagtgca
     6181 tcaggacctg attcaccgtc agccggtgca gccaggtcgt gaaagccgac tcgccacgga
     6241 agctgccaac ttttcgaaag agctgaataa agacttcctg tgccagatcc tcagcctcaa
     6301 ccacatttcc ggtcatgcgc aggcacagcg aataaacgcg gcgattgtgc cgctggtaaa
     6361 gatcctcgaa ggctttcatg tcgccttcgg cagctctttt cgtcagctcg tagtccggag
     6421 ttcgcggtgt ctcggtatcg atggcagcca ctagttcctt cgtatgcgca cttcgatcag
     6481 tctgaagcgt cgcgcggccc atggcctttt ccctattcca gtttactttc agagggctcg
     6541 attcagtatc cgatcaagag ctgcgcgatg acaaggcgtg atgaaaccct tcaacgttgc
     6601 ccgctcatta cacacatccc gtttagaagt aatggagtgg cgtgcggcag gtttggcagg
     6661 tctaccgctg ttttgggtat ttcgagttgg gtaataccga tcgagtcacg cggttccgcg
     6721 atgaccttga ggacatatgg tcatcggtga atcctgttgt cggcgaccca gggatacgtt
     6781 aggcaacaat tttctacccg agacgcaaag tcaccttagt tccccgcttc actcttgcac
     6841 gtttcggact ctggtcgatg accacagtcc ctttgccggt gaagaccggt tcgagtttga
     6901 cgccaaccaa ctcgagcgcg gcaactgcct ttggcttccc cgtgacgtcg ggaaccagga
     6961 ccagcgaagc tccctggtat tgctggatgg cgtcttgaag gtcgcgtctg gcttggttct
     7021 tttcaccgag ttccgcgttt gccaggctcc ggcccacgag cgcctgcgag tcttttgagt
     7081 cttcagcaat agcccgtgcg aaatcctctc tggcgcgccg gattaaactc gttttgtcga
     7141 aatcgctttg agtcgatgcc gccttttgca acagaccgta gccttgacct ttgcgggcat
     7201 tcctgtcccc aggattcagt gtcaatgctt tagtataagc actgagcgcg ttctcattgg
     7261 ccacgttgat ctcttgcgca gtcgctttgc gactgatcag cgtttctccc tgcaaccggt
     7321 atgcatcacc cagattccta agcgggaccg actccaactg cggctgcata ctaatcccga
     7381 caggtttaac ggcgcgaata tagaactgtt gcgcttgaat caggtaggtg tcagcggtgg
     7441 tcaacagccg tttatcttta gattgttcgt acattttcag cgcgccacga gcacgatcga
     7501 aataaatatt tccctgcacc gtcatcacgc gcacagttgc cgggacgtcc cctgtcagcc
     7561 tcgacttggc gacttcgatt tgctcctgcg ccttttccag atcatcggtc aatcgatacg
     7621 cttcagccag gttcgagggg aagtcggccg tcttcttatc aatagaactc tcgggaactt
     7681 tttccagagc ttcaagcgcc ttggcgccct taccccaatc aacgttgact ttgcccatgt
     7741 ctcgatagcc ttcaggctcg ttgcgaacca gggcggcggc ccgtgcctgc ttgaagataa
     7801 ccttgcgttc ctcgtcactg tagttctgca tgacattagg agcggcaatc cgtggttggg
     7861 tcgacaaaat cacgtcactg gtcttatcaa ccaggacctt cgcctcctct tctggaatta
     7921 cttgcggttt gggctcatcg agttgcttct cgcgaacgtc aatctgctga cgcttctcga
     7981 ccttaacttg ccgaaccttg accgcaatag gaagcgtcgc gccgcctatg gtggtgtcaa
     8041 actcacaatt cggctcacgg tcggcgcagt cagagcactt gatttcgact ttacctttgt
     8101 actctccagg ctcagggtcg ggacggtcag ggcgcctgac tattctgggg atgaacgtcg
     8161 cttcacgacc gggccttaac aacactgacc gtggtagaaa ttccagccag ggcatgttat
     8221 cgggggcttc gagttcatac agatgcgttt tccgacattg cggctttcgg cttctaatcg
     8281 tgatggttcg ggacacctgc gaagcattgt cggatgtggt atcgatggca acatcgtaga
     8341 ttaatgcgtc cacgttgtcg tccagcaccg tcacatcagt tccgttactt ggcgggctac
     8401 cgtctttggc ctgacaccag atcggcttga tattttcttt acagacagtg accgtgaact
     8461 cggtaccgcc actgccgccg gcgacgttgt cgctaccggc tgaaagccat ccccgcacgc
     8521 gataaaatgc tcggccccac caggtccatc cggaaccgac ggtgatcttg ctgtccggat
     8581 aaatgatgat ttcgttttcc cgttccaacg cgccctcgag aaaaatgacg gtgacgtagg
     8641 tgtttgcgcc agtttcgatc tcatcaccgg aaaacaagtt aacggtcgtc acggcaggtt
     8701 ctgccgcccg gccgctgacg cgaatgatct tcgcctccgt aatatcagcc gttggcagct
     8761 ggtcgccttt cgtgacaatg gtttcaaccc gcgctattgg ttcgggttca ccaggaatcg
     8821 taacggtttg cggaccctcg ggcgtcggcg aagcagtggg tgactcaacc ggcgtgggcg
     8881 aggcagtggg cgactcgagc ggcgtcggcg aagcagtggg tgatggtgac ggcccagcag
     8941 atgacgtcgc cgtcgatcct ggcaatagcg caggcgcaat cagcagcccg cagacagcgg
     9001 cggagattag taaacttgct aatgcgacca gtttggcggg acgtctcatt ttgttcctcc
     9061 tgttggtacg actcacttga gcgccaggcg cttccgcagc cggcgcatca tgtaatagct
     9121 aacaaccaga gcgagaatgt gataaggagc attcgaaaac aaaagccgcg acttttggta
     9181 agcaacaaag atcaggaata gataaatgcc gctcacgaca aacagcagca ccggaattgg
     9241 tacgcttgaa ttggttcccg ggattgggat cgctataggc tcgttaagcc aacttctgcc
     9301 gacagtctga aacacgacgc ccaacccgac cattaacgcg attagcagca ggtcgacgct
     9361 gatcgaaacc ggattaatgt aaatatcggt tagtaagttc gaaatgacat tcgcttgaat
     9421 ctcaacgcca aatctctttc cgttccgctc acctggttct gaatctgtta cgcaccaaat
     9481 gtctctctcg tcaggaccaa aacattcccc ctgccgcgta accccaatga caacgatgga
     9541 atctgcgtaa tccccaggtc tcgcaagtgt ctgttggtcg ttataaagct tttcgatcgg
     9601 cttcgaaaaa tcgcttatct tggacgccgg agtgagatcg agcttgttga ccatcaacgt
     9661 ctcgccactc cgcgagtaac gggaaaaaac aggcaccgac ttgatcaggt tttgcgagtc
     9721 atccctcacc cggatttcat tttgatccgc gccgagacac gctttggttg cccctcggaa
     9781 gtgcatcacg gcgagcaatg gaagactagg gagcacagcg gtttcgccgt cagcgcaccc
     9841 tgcagcggac acgtctggac ttacggtggc gagtcggact tctcggatta gcctggacca
     9901 ccattgcctt cgcaggttac tcgcgtctcc gcgatagccg gcaaacaact gtttcaactg
     9961 gtccggcatt tccgtcacga tttttccctg ctcggttttg acggccgcga ttaccccggt
    10021 ctgtttcgtc tgctccccga tctgtttggg ctgctgcgcg taacttacgg ccgccagaag
    10081 tttgtccgtc gcctcgtttt cttcaggcgt aagctgtttg ttgtcgaaga agacatccag
    10141 gactatcgtt ttggcgcccg cctgggccag atcgcgaatg agcttcgcgt aatttgcacg
    10201 ccactttgca tcttccccct gcagaacttc gaagttaccg tttttttctc cctccttgat
    10261 cgtgatcatc cgcaactgag gcgcgattgg tttttcaata ctgctgtcca tgaacgagac
    10321 aaactttcgt tcaaggtatt cgtccagatt cagcactccg aacaagccga tccaacaggc
    10381 ggcaaggatt cccaacgtgg ctagcgcgct acggataatt accttcttgc gccatcgcct
    10441 gatctgttcc gccgtgggtt tagctgcggc actctctgca tcgatctgtt cctgaatctg
    10501 agctttctct tcagggccgg cgtcgttctt ctgctgctcg aagatctctc ggttcgcgtc
    10561 atgcgtatca acaaccgtct gcgcggtgtg aagttggcgc actgattcca cagttgcttt
    10621 cttttcgtct gggaaggaga aaatcttgcc gctcccggaa cgcgtaaaga cgaccggagc
    10681 gatgaagtcg atgcggttgg gaaactgctg acacagactg cgacgcgcgc aggctaccgc
    10741 cacatctacg cggccgtgat cgtcgccgcg gcagagactc agataaagct cgcgcgcaaa
    10801 caatcgcgca gcgagctcgt tgagggggtg gcgaaaagct acggcagccg gcagtgaatc
    10861 agtgaccagc cgggcagcaa tcggaaacag cgtgcctgga ttcgatgtga catcgctggc
    10921 gaccgaattc aaaattacaa gcttggtcgg atggtcaccc tcgaaaaaca agctaattgc
    10981 gtccgcatcc agttctgaac ctacgtctcc gtcgattgcc aggcgcggtt cgcgcgtttc
    11041 cgaataccga acgggggcta cgaagtgaac gatttgatac ttacgttcgc gcagcgcgtc
    11101 gcgaattgcc gtcgatgtca gttcaccagg cttgaagtgc accgccacca tcggctcgaa
    11161 ctcgcggagt gcgtccgcga tcgtcgcggc tacagaggta gcacccgact cctgcggact
    11221 gaggatcagc acgttcacga gcggtttgat ttccaacggc ggcacgacgc ccggcaggta
    11281 gcgaatcaca accgtttttg tcgaggcgcc caggaaatgt tttccatctg acatcagctc
    11341 ccagggaatt tcggcgactc gttccgtatt ggttctcaat ctcaaacgaa ttccaacgtc
    11401 acgctcgacc gctcctccga cacactgctg atagaggcgg ccgacttctg cgggaaacgt
    11461 gtgattgaag agatcttcag ccgcggattt gactgaggtt ttttcggcgg tggcggcagt
    11521 atttatgaga acgtcatacg cagtttcgtc gagccgaaac tcgccctgcg ctgcggtggg
    11581 agcctcggcc cgaatcaggc agcggttatt gccatccgaa tcgatccata aatcgaagtc
    11641 acgatagatc attgctgaag ggtcagagtc tttcggctcg atacgcaagc gtgaccgacg
    11701 gttaacgagg aggatggcgt tgctgcttgt gagatcagtc ttccgtacga gaaacgcgtc
    11761 ggaaaccggt ctgagtttgc caacctcagg aacggctgaa attgtagcgc tggtcgcacg
    11821 aatccgccac agttttgcgc ggcgaccgtc ctgcgacctt atgtccagta agttctgtcg
    11881 agcgaccggt aatgcacggc ttcggacacg tgagcggagc tgatgtcgtc tgagtcatcg
    11941 agatcagcaa tcgttcggct caccttaagg atgcgatcat aggcgcgcgc cgacaacccg
    12001 agacgtgcca tcgcgcgttc cagcatcgtc tcgctttccg aatcgatgcg gcaatacttg
    12061 cggattagcc ttggcgacat tgcggcgttc gaatagatcc catcggccgc cagacgctcg
    12121 ccctgatgcg cgcgggcacg aatgacccgc tgtcgaattg cttttgaatc ttcggcatcg
    12181 ggcggtgggt cgccggtgag ttcacgaaac ttcacggccg gcacgtcgat gtggatgtcg
    12241 atccgatcga gcagcggtcc ggagatgcgt ccgacatagc gctgaatctg caagggcgaa
    12301 cagttacatt cgtgcgtcgg gtcattccag tacccgcatg gacacggatt cattgccgcc
    12361 gccagcatga acgaagatgg aaacgtaagc gacatcgccg cccggctgat ggtcacgcgc
    12421 tggtcttcca gaggctggcg cagaacttcg agcacgctgc gatcgaattc gggcaattcg
    12481 tcgagaaaaa gaacaccctg gtgggccagc gacacttcgc ccggtcgcgg cacagcgccg
    12541 ccgccaatca aaccagcatc gctaatagtg tggtgcggcg aacgaaacgg ccgctcgcta
    12601 actaatcccg cgcgacccgt gagtccggcc accgaatgaa tctttgtcag ttcgagcgcg
    12661 gcttcgaatt ccagcggcgg caggatcgtt gggagacgtt tcgttagcat tgtcttacct
    12721 gaccccggcg ggccgatcag aaggatgttg tgcccacccg cggtcgcaac ctcgagcgcg
    12781 cgtttcgccg cctgctggcc gcgcacttcg cgaaaatcaa cgctgtagtg atcagtcggc
    12841 gagagcagct gggacgagtc aacacgaatc gggctgggtg gattttcaga acgcagcccc
    12901 gcgatcgttt cgactgcgtt gcgtagatcc gtgacggcat aaacgttcac gtccgaaacg
    12961 accgcggctt cctttgcatt ttcatccggt aagagaagat gtttcgcctg cgactgtcgc
    13021 gcgcgcaaag caatcgggag cgcgccgcga attgagcgga ctcgaccgtc taacgacagc
    13081 tcgccgacgg aaagaatgtc cgtcaagtgc tcggcatttc cgagatcgcc gttagcgccg
    13141 agaattccga gcgcgatggg caaatcgaaa ctggcgcctt ctttccgcac atccgcgggc
    13201 gccaggttga tcgtcgtctt gtgaaacgga aagaaaaatc cgctgttgtt aattgccgca
    13261 cgaatgcgtt cgcgcgactc gcgcacggca gcgtccggga ggccgaccac gatcaccgcc
    13321 ggtgtctgat ccacttcgtt gcgggccgga gtcagatcga cctcaacatc gaccaggttc
    13381 gcgtcgattc cgtagacagc ggctgagaga gcgcggaata gcacgggagc agcgtaagtt
    13441 tcgcttgggg cgccttaggg ctaaatgggt ttctggtctt gagagcggaa ggaagtatgc
    13501 tacagaaaaa cgaagagcgc gcttttaaca aagcgcgctc ttcgtaagtt aaagcgctcg
    13561 aacagaaaac gagcgcctgc tattttttat tatcaacgac gactggtcgg cgcagatgtg
    13621 ctgcctgccg acggcagttt gatttcctgg cccgcctgca aggctgtgtt cggcgcgatg
    13681 ccattcaacc gggcgacttc gtctgctgac aatttgtgtg cggcggcgat cctcgcgatc
    13741 gtgtcaccct tccgggcctt gaccctggtc aggctcgcgc cgggcgtgtc tgctgagcgc
    13801 ttccagttcg ttagccgaat cgtgctgttc ggcacaaaca acttggttgc gttattgaga
    13861 tccacaccag cattcatgga ttggagagta gagacgctga cgccagtgcg attcgcaatc
    13921 gactgccact cttcacccgg cgccacagag atcacgcgag cggtgtcgcg gcggtcaccc
    13981 ggcactcgct tcagcagcga cgccagttgt ttgccgcgtc cggcaggaac gcgcaccgtg
    14041 aaaggttcac cccgcggcgt ggtgtctcgc ttcagctccg gattaagaat ctgaatgtga
    14101 tccaagctcg tgtccgttgc ctcggcaatc agccgcagac tcgtggctga cggaaccggc
    14161 accggatcaa agctcatggg cgcatcggga cgaacgttgt tgaacccgta tttctccgga
    14221 ttcttcgcaa tcaaaatcac cgcgagaatg ttcggaacgt agttgcgggt ctcttgcgca
    14281 atgtatgggt aaatcttcca gaagttggcc tcgcccgcac gtgaaatcgc gcgatcgacg
    14341 ttgccggcac ccgtgttgta cgcggccatc gccagcagcc agtcgccgtt gtaacgattc
    14401 gccaggtctt tcaggtgtcg cgctgacgcg gacgtcggct tttcgattcc gttccgctca
    14461 tcgacccagg cagtctgccg caggccgtat gcagcgccgg tgctgccaat gaactgccac
    14521 aggccggaag ccgcagccca tgactttgca cgcggctgcc aggcactctc gacttgtcct
    14581 aaccaaacaa tgtcctcagg aacaccagcc ttgcggaagg cgtcgcgagc aatcttcatg
    14641 taacgcccag agcggcgcag gcccgactcc atcgtattac gaccaccgcg tccctgataa
    14701 aaattgatgt actgctggac cagtggattc atcgtgaatt tgaaatccag cgagttcttg
    14761 acttgctccg aggttgccaa ttgttcagca gttactgttt tctcgtcctc ggtgagaatg
    14821 agtttgctga gggcgtccag tggcgatggc tcaaatccct gctgcacgaa accaatctgt
    14881 tgttgttttg gctgtgcttg ggcgacttca acgatttccg cgttcgcgtt ggcgggtgct
    14941 tgcgcgacga cagtcgtcgc attcggcgcg acctgcgtca gcggaacttc ttcgcggtaa
    15001 attcgctcga cgagctccag gtagtacgtc tgaagccgct gacttgaccg aacatccatg
    15061 ccggacatca ggatcgcgtc aactgctttg tcgaactcgt cacgcgcttg ctcgcgcttg
    15121 ttgtcttcga gattgagctt gcctttgcgg aaatgatcgt tcgcgcgctc gataatttga
    15181 tcgacgcgag gctcattctt ctgaacctcc gtctgaatgt cgcgagcaga cgaaccagcg
    15241 ggaccttgag cctgaattac tgctggggta aaaagtgcga ctgcaaacag gacacttgaa
    15301 aatacgggaa cagctttacg ggtcatcaat cgttattctc ctgagacttg ctttcggggg
    15361 aatccacgac tgcgactcac ccgagtcgcg cgcctgcggt attcaataag taaacagtcg
    15421 agaaccttca aaagttccgt tttagtggct aaaagccca
//
LOCUS       DATDBY010000135         8424 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2952069, whole genome shotgun sequence.
ACCESSION   DATDBY010000135 DATDBY010000000
VERSION     DATDBY010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8424
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2952069"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VIT19_02625"
     CDS             <1..190
                     /locus_tag="VIT19_02625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002640701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="KOW motif-containing protein"
                     /protein_id="HEY5837902.1"
                     /translation="FSYAAGETVRIKSGPFQSFTGKVEEVNEEKSTLKVTVTIFGRST
                     PVELNFLDVEKVTFTEEE"
     gene            190..615
                     /gene="rplK"
                     /locus_tag="VIT19_02630"
     CDS             190..615
                     /gene="rplK"
                     /locus_tag="VIT19_02630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006676477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEY5837903.1"
                     /translation="MAKKISGYIKLQVPAGKANPAPPIGPALGQHGVNIMEFCKAFNA
                     KTAQMDPDMKIPVVITVYADRSFTFETKTPPAADLLKKAAGISKGAGNPKKEKVGKIS
                     RAKIEEIAKTKMPDLNTTNLESAIRTIEGTARQMGLTVE"
     gene            720..1415
                     /gene="rplA"
                     /locus_tag="VIT19_02635"
     CDS             720..1415
                     /gene="rplA"
                     /locus_tag="VIT19_02635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009880170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEY5837904.1"
                     /translation="MKKHGKKYRAALEKIEDGRKYNLEDAVKKLKEIAFAKFDETVEL
                     TMWLGVDPRKADQLVRGTIVLPHGLGKTKTVVVIAQGDKIREAEEAGADFVGGEDLVT
                     RIKGGWLDFDAVIATPDMMRFVGGLGKVLGPRGLMPNPKTGTVTPDVKTAIRETKAGK
                     VEYRVDKTGVIHTGVGKVSFDENKLVENTRALIDAVAKAKPSTAKGKYMKKVNLASTM
                     SPGILLDETAFAR"
     gene            1425..1958
                     /gene="rplJ"
                     /locus_tag="VIT19_02640"
     CDS             1425..1958
                     /gene="rplJ"
                     /locus_tag="VIT19_02640"
                     /inference="COORDINATES: protein motif:HMM:NF000955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEY5837905.1"
                     /translation="MKTRKQKQENLDALAEQFKNANAAMLVSFKKMTVAKDQELRRQL
                     REAGVTYSVVKNTLARQAAAGTPLEPLADEFKGVTGVALSTTDPVGLSKAISKFTKAN
                     AEIFSFKVGLVEGRVLELKQVEAIANLPSREELISKMLFLINAQAQRLVTVIQAVPRN
                     LAVVMDQVRAQKEAQGA"
     gene            2154..2537
                     /gene="rplL"
                     /locus_tag="VIT19_02645"
     CDS             2154..2537
                     /gene="rplL"
                     /locus_tag="VIT19_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007654177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEY5837906.1"
                     /translation="MADIQAIVDQIKGLTLLEASELVKAMEETFGVSAAAATVAAAPA
                     GAAAGEAAAPAEEQTEFDVVLQAIGGNKINVIKVVREVTALGLKEAKDLVEAAPKAVK
                     EGVSKEEAETIKTKLTEAGATVEVK"
     gene            3008..7315
                     /gene="rpoB"
                     /locus_tag="VIT19_02650"
     CDS             3008..7315
                     /gene="rpoB"
                     /locus_tag="VIT19_02650"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR02013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEY5837907.1"
                     /translation="MDLLPEERINTGLQAVFQSVFPISDFRETANLDFVEYQIGNWQC
                     KCGNLEGLQYLRAACKSCAAKIKVDPLRPGETLCHVCGTFNSVRPELCPNCGEPVGLK
                     HKHDQQECQERGMSYSVPLKVKIRLTVYDKDPDTGIKSIRDIKEEEVFFGEIPLMTDN
                     GTFIINGTERVIVSQLHRSPGVFFKRGAMFIAKIIPYRGSWVEFEYDQKNLLYVRVGK
                     RKFLATIFLRALGVWLSDAFKKRALGDTLLEDLVKNASFSDEDLLRAFYVVDEVRVEE
                     NRLMVQVPESGRTNLIGMKVDFEIKGRGGDAVVRKGKEVTRTSLEGLRKANIGEVEIE
                     PQQFEGAYAAGDIVNTETGEVVVEANNEITATKLQEIIEAGVQSFPVLFPERDDVGVV
                     VSQTLKKDTITKPVDALLEIYRKMRPGDPPTVQTAYRLLEGMFFDPRKFDFSRVGRLK
                     FNIKMGKPERDRIEDPLLQAGDFFEVVEYVLKMRRNPVDDQKQPIYKADDIDHLGNRR
                     VRAVGELLENQFRIGLERMERAIKEKMSIHQEMQTTMPRDLINAKPVTAAVREFFGSS
                     QLSQFMDQTNPLSEITHKRRLSALGPGGLSRERAGFEVRDVHPTHYGRICPIETPEGP
                     NIGLISSLSCYARINEFGFIESPYRKVVNGVVTEFVRVRNGGDTKFKPNDHVSQEDVE
                     KANKRVGADGKASSEPYPFYLTAWEEDKHVVGQANIELDENGYIVNERNAARKAGEFI
                     LAHRDEIEFVDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQSVPLLRAEAPYIG
                     TGMESVTARDSGAVVIARRDGVVDYTDSERIIVKADHNVDGTISREVTADIYTLIKFK
                     RSNQNTCINQRPIVHVGERVAKGQVIADGPCTDRGELALGRNILVAFMPWRGYNFEDA
                     ILVSERLVKDDYYTSIHIEELEIEARDTKLGPEEITRDIPNVGENMLRDLDESGIIRI
                     GAQVKPGSILVGKVTPKGETQLTAEEKLLRAIFGEKAADVKDASLVSPPGIDGTVVDV
                     QVFTRKGQEKDPRSLAIETTEEERLRRDLEDEIRILHEQRNERIYELFEGRKLSADLT
                     DHREVVIPKGETITREMLGSIEAKVLRKAQIAGSRVDAATEVKSYEDRTERQVKILSD
                     IYEEKIAKLRQGDELSPGVIKMVKVFIAMKRKLSVGDKMAGRHGNKGVIARILPEEDM
                     PYLPDGTPVEIVLNPLGVPSRMNVGQILETHLGWAARVLGLHFATPVFDGATEKEIKQ
                     KLAEAGARAAELGLPEIVNSSGKAVLYDGLTGDAFEQKVTVGYIYMLKLSHLVDDKIH
                     ARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAHILQELLTAKSDDVAGRS
                     KIYEAIVKGEADFDPGLPESFNVLVRELQSLCLDVELVKKDGTPDDVIAEPLITSGI"
     gene            7400..>8424
                     /locus_tag="VIT19_02655"
     CDS             7400..>8424
                     /locus_tag="VIT19_02655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020808074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEY5837908.1"
                     /translation="MFRFHQEKTQLAPDFEAIRISLASPEKIRQWSHGEVTKPETINY
                     RTFKPERDGLFCARIFGPVADWECLCGKYKRMKHRGVICDKCGVEVTQAKVRRERLGH
                     IDLASPCSHVWFFKGLPSRIGHLLDIPLRELEKVLYFESYIVIDTGDLKELKERELLT
                     DERYRELTRDYPGQFVAKMGAEAIKELLSMVNIEELAVELRRRMREETSQQKKLKFSK
                     RLKVATSFLKSGNHPEWMILDVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNN
                     RLKKLMELRAPEVIVRNEKRMLQEAVDALFDNGRRGRVLRGVNNRPLKSLSGTLKGKQ
                     GRFRQNLL"
BASE COUNT         2009 a         2191 c         2579 g         1645 t
ORIGIN      
        1 gttctcgtac gcggcgggcg agacagtgcg catcaagtcg ggtccgttcc aaagcttcac
       61 cggcaaggtt gaggaagtta acgaagagaa atccacgttg aaggtgaccg tcacgatctt
      121 cggacgttcg acgccggttg aattgaattt tcttgacgtt gaaaaagtga cgtttacgga
      181 agaagagtaa tggcaaagaa gatttcaggt tacatcaagt tgcaggttcc cgccggaaaa
      241 gctaatccgg cgccacccat tggcccggcg ctgggtcagc acggcgtgaa catcatggaa
      301 ttctgcaagg ctttcaacgc caagaccgcg cagatggatc cggacatgaa gattccggtc
      361 gtgatcacgg tctacgccga tcggtcgttc acgttcgaga ccaagacgcc gccggcagcc
      421 gacctgctga agaaggccgc gggaatctca aaaggcgcag gcaatccgaa gaaggaaaag
      481 gtcggaaaga tctcgcgcgc taaaattgaa gagatcgcga aaacgaaaat gcccgatctg
      541 aacacgacga acctcgagag cgcgattcgc acgatcgaag ggacggcacg gcagatgggg
      601 ctgaccgtcg aataagtatc agtcccattt tcctataggt cctaaaggac gaataggacg
      661 gataggacca tgagagaggg agggatcaaa cgattccgtt tgcacctcgg agctggaaaa
      721 tgaaaaagca cggaaagaag tatcgcgccg ctttagagaa gatcgaagac gggcgcaagt
      781 acaatttgga agacgcggtc aagaagctga aagagatcgc gtttgcgaaa tttgacgaga
      841 cggttgaact aacgatgtgg ctgggcgtgg atccgcgcaa agccgatcag ctggtgcgcg
      901 gcaccatcgt tttgccgcac ggtctcggta aaaccaagac agtcgtagtt atcgcgcagg
      961 gcgacaagat tcgtgaagcc gaagaggcgg gcgcggactt tgtcggcggc gaagacctcg
     1021 tgaccaggat aaaaggcggc tggctcgatt ttgatgccgt gatcgccacg cccgacatga
     1081 tgcgttttgt tggcggcctc ggaaaggtgc tcggcccgcg cggtctgatg ccgaatccga
     1141 aaaccggcac cgtcacgccg gacgtgaaga ctgcgatccg ggaaactaaa gccggcaagg
     1201 ttgagtaccg cgtcgataag accggcgtta ttcacacggg cgtcggaaag gtttcattcg
     1261 acgagaacaa gctggtcgag aacacgcgcg ccttgattga cgcggtggcg aaggcgaaac
     1321 cgtcgaccgc caaaggtaag tacatgaaga aagtaaacct ggcctcgacg atgagcccgg
     1381 gcattctgct cgatgaaacc gcgttcgcga gatagggagt tgccatgaaa acaaggaaac
     1441 aaaagcagga aaatctcgac gcgctggcgg aacagttcaa gaatgcgaac gcggcgatgc
     1501 tggtcagttt caagaagatg accgtggcca aagatcagga gctgcgccgg caactgcgcg
     1561 aagcaggcgt gacttattca gtcgtcaaga acactttggc gcgccaggct gccgccggga
     1621 caccgcttga gccgctcgct gatgaattca aaggcgtgac cggcgtggcg ttgagcacga
     1681 ctgatccagt cggcttgtcg aaagcgattt caaagtttac gaaagcgaac gctgagattt
     1741 tcagttttaa agtcggcctg gtcgaaggaa gggtcctcga gctgaaacag gtcgaagcaa
     1801 tcgcaaatct gccgtcgcgt gaggagctca tttcgaagat gctgttcctg atcaacgcgc
     1861 aggcgcaaag attggtgacc gtgattcagg cagtgccgcg caatcttgcg gtggtgatgg
     1921 atcaggtgcg cgcgcagaaa gaagcgcagg gcgcttaaac gaattcgaaa ttcgaattgc
     1981 gaaattcgaa attagattgt ggccgtcgct aattgtcagt ggacggccgg ggaaggcaaa
     2041 agtcgcggcg atgcagccgg gatggatgcc aaagaaattc gtgagtctca tatctgaaat
     2101 ttgaaatctc agagtggctt gcgcaagagc gatacaggag aaggtaacaa atcatggctg
     2161 acattcaggc aattgtggat cagattaagg gcttgacgtt gctggaagct tccgagctcg
     2221 tcaaagcgat ggaagagacg tttggcgttt ccgcggcagc ggcgacggtt gctgcagcac
     2281 ctgcgggcgc ggcggctggt gaagctgcgg cgccggctga ggagcagact gagtttgacg
     2341 tcgtcctcca ggcgattggt ggcaacaaga tcaacgtcat caaggttgtt cgcgaagtca
     2401 ccgcgctcgg cttgaaggaa gcgaaagacc tggtcgaggc tgcacccaag gccgtcaagg
     2461 aaggcgtgtc caaggaagaa gccgaaacga tcaagaccaa gctgaccgaa gcgggcgcaa
     2521 ccgttgaagt gaaataagaa caaggaaggt ctttgggctt cgagctttgg tcttcgttgc
     2581 ggcgaagcgt caacgttcga aaccacatca aagaccgaag atcaaagccc aaagaccagg
     2641 cctttggctt gacctttggt cattgagccg ctaacttagt ggagtattga aggggctgtc
     2701 gttactcccg aaaaacttta acgaatgcaa gcgcgtttca ctttttgaag cggccgggta
     2761 attgtgcgtc ccggccgcga ttacgtgtct ttgcacgtaa gtaatcgcgc gacctcaact
     2821 tgctattcgt cgcacatcga catcaggagc attcatgtct gcaaatcttc tcgaagcaac
     2881 taacacgggg ttgggacggc gcacgagtca ggcgccggag cggcaggact tttccaagat
     2941 caagacggcg gtaccaatcc ccaacttgat tgaaattcag cgcgattcgt acaaccggtt
     3001 cctgcaaatg gatctgctgc cggaagagcg aattaatacg ggacttcagg cggtgttcca
     3061 gtcggtgttt ccgatttctg atttccgcga aaccgcgaat ttggatttcg tcgagtatca
     3121 aatcggcaac tggcagtgta agtgcggcaa ccttgaaggt ctccagtacc tgcgggcggc
     3181 ctgtaagagc tgcgcggcga agatcaaagt ggatccgttg cgcccgggcg agacgctgtg
     3241 ccacgtttgc ggcactttca attcggtgcg tccggagctg tgcccgaact gcggcgagcc
     3301 cgtcggcctg aagcacaaac acgatcagca ggagtgtcag gagcgcggca tgagctacag
     3361 cgtgcccctg aaggtcaaga ttcgcctcac cgtttacgac aaagatccgg ataccggcat
     3421 taaatcgatc cgcgacatca aggaagagga agtcttcttt ggcgagattc ctttgatgac
     3481 cgacaacggc acgttcatca tcaacggaac tgaacgcgtc atcgtttcgc agttgcatcg
     3541 gagccccggc gttttcttca aacgcggcgc gatgttcatc gcgaagatca ttccgtaccg
     3601 cggttcgtgg gttgagttcg aatacgatca gaaaaacctg ctgtacgtcc gcgtcggcaa
     3661 gcgcaagttc ctggcgacca ttttcctgcg cgctttgggc gtttggctca gcgacgcgtt
     3721 taaaaagaga gcgcttggcg acacgctgct ggaagacctg gtcaaaaacg catcgttctc
     3781 agacgaagac ctgctgcggg cgttctacgt cgttgacgag gtgcgcgtcg aagaaaatcg
     3841 tctgatggtg caggtgccgg aaagcggccg gacgaatctc atcggcatga aggtcgattt
     3901 cgagatcaaa ggtcgcggcg gtgatgcggt ggtgcgcaaa ggcaaggaag tcacgcgcac
     3961 gtcgctcgag ggtctgcgca aagccaacat cggcgaagtt gaaatcgagc cacagcagtt
     4021 cgaaggcgcc tatgcggccg gcgacatcgt caacaccgaa accggcgaag tcgttgtcga
     4081 agccaacaac gaaatcaccg ccaccaagct tcaggaaata atcgaagccg gcgtgcagag
     4141 ttttccagtc ttattcccgg aacgcgatga cgtgggcgtg gtggtttcgc agacgttgaa
     4201 gaaggacacc atcacaaagc cggttgatgc gttgctcgag atttatcgca agatgcgtcc
     4261 cggcgatccg ccgacggtgc agactgctta ccgtctgctt gaaggcatgt tcttcgatcc
     4321 gcggaagttc gacttctcgc gcgtgggccg gctgaaattc aacatcaaaa tgggcaagcc
     4381 tgagcgggat cgcattgagg atcctttgct tcaggccggc gacttcttcg aagtcgttga
     4441 gtacgtgctg aagatgcgcc gcaatccggt cgatgaccag aagcagccga tctataaggc
     4501 ggacgatatc gatcacctgg gcaatcggcg cgtgcgcgcg gtcggtgagt tgctcgaaaa
     4561 ccagtttcgc atcggccttg aacgcatgga gcgcgcgatc aaggaaaaga tgtcgattca
     4621 tcaggaaatg cagacgacga tgccgcgcga cctgattaac gccaagccgg tcacggccgc
     4681 ggtgcgcgag ttctttggct cgtcacagtt gtcgcagttc atggatcaga cgaatccgct
     4741 ttcggaaatt actcacaagc ggcgtttgtc ggcactggga ccgggtggtc tgagtcgcga
     4801 gcgcgccgga ttcgaagtgc gcgacgtgca cccgacgcac tatggccgca tctgtccgat
     4861 tgagacgcct gaaggtccga acatcggcct gatttcgtct ctgtcatgct atgcgcgcat
     4921 caacgagttc ggctttatcg aatcgccgta tcgcaaagtc gtcaacggcg tggtgactga
     4981 gtttgtgcgc gtgcgaaacg gcggcgacac caagttcaag ccgaatgacc acgtgtcgca
     5041 ggaagatgtt gagaaagcaa acaagcgcgt cggcgcggac ggcaaagcca gttccgaacc
     5101 ttatccgttc tatctgacgg cgtgggaaga ggacaagcac gttgtcggcc aggccaatat
     5161 cgagctggac gagaacggtt acatcgtgaa cgagcgcaac gccgcgcgaa aggccggcga
     5221 gttcattctc gcgcatcgcg atgagatcga atttgttgac gtgtcgccga agcagcttgt
     5281 ttcggtggcg gcgtcgctga ttccattcct cgaaaacgac gacgcgaacc gcgcattgat
     5341 gggttcgaac atgcaacgcc agtcggtgcc tttgctccgc gcggaagcgc cttacatcgg
     5401 cacgggcatg gagagtgtga ccgcccgtga ttcgggtgcg gtcgtgatcg cgcgccggga
     5461 cggcgtggtc gattacaccg actcagaacg catcatcgtt aaagccgatc acaacgttga
     5521 cggcacgatt tcgcgcgaag tgaccgcgga catctatacg ctgatcaagt tcaagcgttc
     5581 gaaccagaat acctgtatca atcagcggcc gatcgttcac gttggcgagc gcgtcgcgaa
     5641 aggccaggtc atcgctgacg gaccttgcac ggatcgcggc gagttggccc tgggccggaa
     5701 cattctggtc gcattcatgc cctggcgcgg ctacaacttc gaagacgcga ttctggtttc
     5761 tgagcggctg gtgaaagacg attactacac ctcgatccac attgaagagc tggaaatcga
     5821 agcgcgcgac acgaagcttg gaccggaaga aatcacgcgt gacattccga acgtcggcga
     5881 gaacatgctg cgcgacctgg acgagagcgg catcatccgc attggcgccc aggtcaaacc
     5941 gggctcaatc ctcgtcggta aagtcacgcc gaagggcgag acgcaactga cggcggaaga
     6001 gaaactgctg cgcgcgatct ttggtgagaa ggccgcggac gtgaaagacg cgtcgctcgt
     6061 gtcgcctccg ggcattgacg gcacagtggt cgatgttcag gtgttcacgc gcaaaggtca
     6121 ggaaaaagat ccgcgctcgc tggcaatcga aactactgaa gaagaacgtc tgcgacgcga
     6181 ccttgaagac gaaatccgca tcctgcacga gcagcgcaat gaacgcattt acgagttgtt
     6241 cgaaggtcgc aaactttcgg ccgaccttac cgatcatcgt gaagtcgtca ttccgaaggg
     6301 cgagacgatt acgcgcgaaa tgctgggaag catcgaggcg aaggtcctgc ggaaagcgca
     6361 aatcgccggc tcgcgggtgg acgctgcaac tgaagtcaaa tcctacgaag atcgcacaga
     6421 acggcaggtc aagattctct cggacatcta cgaagagaag attgcgaagc ttcgtcaggg
     6481 cgacgagctt tcacctggtg ttatcaagat ggtgaaggtc ttcatcgcca tgaagcgcaa
     6541 gctttcggtc ggcgacaaga tggccggccg ccacggaaac aagggcgtca tcgcgcgcat
     6601 tctgccggaa gaggacatgc cttacctgcc ggacgggacg ccggtcgaga tcgttctgaa
     6661 tccgctgggc gtgccgtcgc gcatgaacgt cggtcagatt ctcgagacgc accttggctg
     6721 ggccgcccgc gtgctcggtc tgcatttcgc gacgccggtg ttcgacgggg cgactgaaaa
     6781 ggagatcaag cagaagcttg ccgaagccgg cgcgcgtgcg gccgagctgg ggctgcctga
     6841 aatcgtcaac tcctccggca aggctgtgtt gtacgacgga ttgacaggtg atgcgttcga
     6901 gcaaaaggtc accgtcggct acatctacat gctgaagctt tcgcacctcg tggacgacaa
     6961 gatccacgcg cggtcgattg gaccgtactc gctgatcacg cagcagccgc tcggcggcaa
     7021 ggcgcaattc ggcggacagc gcttcggcga aatggaggtg tgggcgcttg aagcgtacgg
     7081 cgccgcgcac attcttcagg aattgctgac ggccaagtct gacgacgtgg ccggacgctc
     7141 gaagatttac gaggcgatcg tcaaaggcga agcggatttc gatccaggtt tgcccgaaag
     7201 cttcaacgtg ctcgtgcgcg aactgcaatc gctttgcctc gacgtcgagc tggtgaagaa
     7261 agacggcaca ccggacgatg tgattgctga gcccttgatt acgagcggca tataggtccc
     7321 atacgtccca tctgtctcat gggtcccatg ggacagatat gaccagtggg acaaatggga
     7381 cccataaacg ggagaaaaga tgtttcgatt tcatcaagag aaaacgcaac tggcgcctga
     7441 tttcgaggcg attcgcatct cgctcgcttc accggagaaa atccgacagt ggtcgcacgg
     7501 cgaggtgacg aagcctgaga cgatcaatta ccggacgttc aagcctgagc gcgacgggct
     7561 cttctgcgcg cgcatcttcg ggccggtcgc ggactgggaa tgtctctgcg gcaagtacaa
     7621 gcggatgaaa caccgcggcg tgatctgcga caagtgcggg gttgaagtaa cgcaggcaaa
     7681 ggttcgtcgt gagcgtctcg gtcatatcga tctcgcgagc ccgtgttcgc acgtgtggtt
     7741 cttcaaaggc ctgccgtcgc gcatcggcca tttgctcgac atcccgctcc gcgagctgga
     7801 gaaggtcctc tatttcgaat cgtacatcgt tatcgacacc ggcgatctga aggaactcaa
     7861 agaacgcgag ttactgaccg acgagcgcta tcgcgagttg acccgcgact atcccggcca
     7921 gttcgtcgcc aagatgggcg ccgaagctat taaggaattg ctctcgatgg tcaacatcga
     7981 agagctcgcg gtcgagcttc gtcggcgcat gcgcgaagag acttcgcagc agaagaaact
     8041 aaagttttcc aagcgactca aagttgccac ctcgttcttg aagtcaggta atcatccgga
     8101 atggatgatt ctggatgtga ttccggtaat tccacctgag cttcgtccgc tggtgccgct
     8161 cgatggcgga cgcttcgcga cttcggatct gaacgacctg tatcgtcgcg tcatcaatcg
     8221 caacaaccgt ctgaagaagc tgatggagtt gcgcgcgccg gaagtcatcg tgcgtaacga
     8281 aaagcgcatg cttcaggaag ccgtcgacgc gctgttcgac aacggtcgtc gcggtcgcgt
     8341 gttgcgcggc gtgaataatc ggccgctgaa gtctttgtcc ggaactctca aaggcaagca
     8401 gggacgcttc cgtcagaacc tgct
//
LOCUS       DATDBY010000136         2583 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2757697, whole genome shotgun sequence.
ACCESSION   DATDBY010000136 DATDBY010000000
VERSION     DATDBY010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2757697"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(514..1923)
                     /locus_tag="VIT19_02660"
     CDS             complement(514..1923)
                     /locus_tag="VIT19_02660"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEY5837909.1"
                     /translation="MQTLRLLRSFAAFAVLFVAISSAVAQTQLPADVTGQIDKLVTDT
                     LSRTGVPSASVAIVKDGQIAYVKTYGDAKLEPKTPSTTQMRYSIGSISKQFTAAAILL
                     LQEQGKLSLDDKVAKYIPDLTRANEVTIRQLLSHTSGYQDYWPQDYVMKPMLESITAR
                     KIMETWARKPLDFEPGTKWQYSNTGYVIAGAIVEKVARMPFFEFLQQHIFKPLNMTSV
                     ISVDKGRLTDSDPVGYLRYALGPLRVAPKEGTGWLFAAGELAMTAEDLAKWDISIIDR
                     KLLKASSYLVLGTEMLLKDGLGTNYGLGVTVTSPGGHRALSHGGGVSGFTTSNIVFPD
                     DRVAVVVLTNLDSGGASGPIATGIPPLLFVVNDPVTTARLEQAKKIFEGLQQGKIDRT
                     LFTDNANGYFSERALEDFKTSLGPLGKWDSFTQTSQSLRGGMVGRVYVVRFAQKTIRA
                     WTYEMPDGKLEQFQVAVGN"
     gene            2300..>2583
                     /locus_tag="VIT19_02665"
     CDS             2300..>2583
                     /locus_tag="VIT19_02665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837910.1"
                     /translation="MKYLRLILAGFVVCLTCVAIPQNSFAQDQKKSAPNHVHYKEPTQ
                     QTASPTGAIAPRLQKLGNHKFPVSTKNARAQLFMNQGFNLSYAFNHAEAGR"
BASE COUNT          558 a          741 c          703 g          581 t
ORIGIN      
        1 caagcaagcg cagctctttg ttcgtcgtat gcgagtcaat cagcgccacc atttcaacgg
       61 cttgtgcgtg atgcatgatc atgccctgca tgaactcaac atctttcggc gaagtcggcg
      121 gtagagtggg tcgtgtcgat gctggcagcc tcctcgtcgg ctggccgggc gcgccgggtt
      181 gtacgattac cggtggtgcc ggattagcct gctgggcgca gaccggcaat gaagcggcga
      241 gaacaatgac ggcggagatg agcggacgtc ggcacgcaac aaggggtccg gtccgcaagg
      301 tctcattcac acctcgcttt agcgaggtgg cttgagccat gggatttagt cgcagccgtt
      361 tgagcggctt tctaaaggaa aaccgttgaa acggtttcga agcgttgctg cgccaacgat
      421 cacctcgctg aagcgaggtg tgaataacat gaatagactt catcgcgtgt aactaatctt
      481 gaaacgactt tgccgttatc gcaaagcgcc gattcaattc cctaccgcca cctgaaactg
      541 ttccagcttc ccgtccggca tctcgtaagt ccaggcgcgg atggtttttt gtgcgaagcg
      601 aacgacgtaa actcgcccga ccatgccgcc acgcaagctc tggctggttt gtgtgaatga
      661 atcccattta ccgagtgggc ccaggctggt cttgaaatct tccaaagctc gttcgctgaa
      721 gtaaccgttc gcgttgtcgg tgaaaagcgt tcggtcaatc ttgccctgct gcagtccttc
      781 gaaaatcttt ttcgcttgtt ccagcctcgc agtcgtcact ggatcgttca ccacaaataa
      841 cagcggtgga atgccggtag caattggccc ggaagcgccg ccgctatcca ggttcgtcaa
      901 cacaaccacc gccactcgat cgtcgggaaa gacaatgttg ctcgtggtaa agcctgagac
      961 accgcctccg tgtgaaagcg ctcggtgtcc gcccggggaa gtcacggtca caccgaggcc
     1021 gtaatttgtc ccgaggccat ccttcagcaa catctcagtt cccagcacga gataggaact
     1081 cgctttcaaa agcttccgat cgataatcga gatgtcccat ttcgccaggt cctctgccgt
     1141 cattgccagt tcgcccgccg cgaacagcca gccggttcct tctttcgggg cgacgcgcaa
     1201 aggaccaagc gcgtagcgca gatagccgac cggatcgctg tcagtcagtc ttcctttgtc
     1261 gacgcttatc acacttgtca tgttgagcgg cttaaagatg tgctgttgga ggaactcaaa
     1321 gaacggcatg cgcgccacct tctcgacaat cgccccggca atcacgtagc ccgtattgct
     1381 gtattgccac ttcgtccccg gttcgaagtc gagcggcttc ctggcccagg tttccatgat
     1441 ctttcgtgcc gtgatcgact cgagcatcgg cttcatcacg taatcctgcg gccagtaatc
     1501 ctggtagccc gatgtgtgcg acagcagctg ccgaatcgtc acttcattcg cgcgcgtcaa
     1561 atcgggaatg tatttcgcga ctttgtcgtc gagcgaaagc tttccctgct cctgcaaaag
     1621 cagaatcgcc gccgcggtga actgcttgct gatcgagccg atgctgtaac gcatctgcgt
     1681 cgtcgacggc gtcttcggtt ccagcttcgc atcgccgtaa gttttcacat aagcgatttg
     1741 tccgtctttg acgatggcga cggacgcgct cggcacgccg gttcgcgaga gtgtgtcggt
     1801 gacgagtttg tcgatttgtc cggtgacatc ggccggaagc tgcgtctgcg ccacggcgga
     1861 cgaaatcgcg acaaaaagaa cggcaaaagc tgcgaaacta cgaagtaatc ttaaggtctg
     1921 catgacgtct ccttctggac gaagcggggg cactagcccg gccgtgaggg agggctccat
     1981 cgcaaacgcg cgtgaccggt taagcaattg agccctcctt tacagtcgag ctaatgcccc
     2041 gggttcgtcc gtcaaaaact gcgtgattat atagcagcgt tgcgatagaa tccctctccc
     2101 cgcagcacgg atgtcttgcg gatcttgctt ttccttagcc caggcgttaa cgcctgggga
     2161 aacgaagtcg attgagatcg aaagcctcat taatggggct tcagattctg ttcttttttg
     2221 aatacccagg cgtaaacgtc tgggctacag aaacgggaca aaccaccgca aagagactct
     2281 atttggagag gaccagccca tgaaatacct acgactaatt cttgccggtt tcgttgtttg
     2341 cctgacctgc gttgctattc cgcagaacag cttcgcgcag gaccagaaga aatcggcgcc
     2401 gaatcacgtt cattacaaag agccaacgca gcagacagct tcaccgacgg gcgcgatcgc
     2461 gccgcgcctg cagaagctcg gcaatcacaa atttccggtg tcgacaaaga acgcacgggc
     2521 gcagctcttc atgaatcagg gattcaacct ttcctacgcg ttcaaccacg ccgaagccgg
     2581 tcg
//
LOCUS       DATDBY010000137         4695 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1320069, whole genome shotgun sequence.
ACCESSION   DATDBY010000137 DATDBY010000000
VERSION     DATDBY010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4695
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1320069"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1605
                     /gene="hflX"
                     /locus_tag="VIT19_02670"
     CDS             <1..1605
                     /gene="hflX"
                     /locus_tag="VIT19_02670"
                     /inference="COORDINATES: protein motif:HMM:TIGR03156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEY5837911.1"
                     /translation="VTPEFARQLSELSHETNRQIGVLIDRKGYIEYVTVGDARRIELP
                     DFKRVRVAGDRFRGLRCVHTHLRGEELTRDDLTDLALLRLDLMAAIDVDQRTGLPGLV
                     RAAHILPSRPAEENGKGDQFGFLEPALPSQLNVHFLELMEALEAELARNRRTVKRTGA
                     GDAVILVNVTTGSISEAEDSMAELRELAISAGVVVLDAVIQRRQSIDPRTVMGKGKLD
                     ELLIRAMQLGADALIFDRELQPAQVRSISEATDLKVIDRSQLILDIFAQRAQSREGKI
                     QVELAQLKYILPRLVVGQDSAFSRLAGGIGGRGPGETKLETDRRRVRDRIHRLEKELA
                     SQRGHRTQRRKERLRHAVPVVSIVGYTNAGKSTLLNLLTSSHVLAEKRMFATLDPTSR
                     RLRLPREKEVIINDTVGFIRDLPPDLLAAFRSTIEEITGSSLLIHLVDAANPRWQQQV
                     ESVNRTLAELELREIPRLLVFNKTDLVERADLVAMQREVQTETGSETLAISATNRATL
                     PLLLDRIEAATRGSSESAQNFESSLR"
     gene            complement(1578..2066)
                     /locus_tag="VIT19_02675"
     CDS             complement(1578..2066)
                     /locus_tag="VIT19_02675"
                     /inference="COORDINATES: protein motif:HMM:NF013401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HEY5837912.1"
                     /translation="MERLWSPWRHEYIVTTGSKMSEGSCIFCEAFQNPANDEKNFVLH
                     RAAHNFIILNLYPYISGHLMIAPNAHLGEFGSTPKEATDEMMDLAKRCQTALREVYDP
                     DAFNLGMNLGRAAGAGVADHFHLHIVPRWNGDTNFMSTVGDTRVLSEDLPTTYRKLLS
                     KF"
     gene            complement(2085..2405)
                     /locus_tag="VIT19_02680"
     CDS             complement(2085..2405)
                     /locus_tag="VIT19_02680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEY5837913.1"
                     /translation="MTKADLVDDVANAAELTKKDAERLVELVFDSIIQSLNKGEKIEL
                     RGFGSFRVRGRGARRGRNPKTGEPVNIPAKRVPYFKAGKELKELINQASGAPVVAGSD
                     NAIG"
     gene            complement(2554..4416)
                     /locus_tag="VIT19_02685"
     CDS             complement(2554..4416)
                     /locus_tag="VIT19_02685"
                     /inference="COORDINATES: protein motif:HMM:TIGR00717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEY5837914.1"
                     /translation="MSTDETNGVRESETTTNNSSSDNNSATAVAPAPAAQLSSEPEPA
                     VPQEQLDEDERRKSTEDFGQLLDQFEQEQSALQEGEVVRGTVVGVTERGVLIDFGYKS
                     EGIVNPTEFMENGELTVKRGDEVDVMVKAMETSEGYPVLSRADAVRLRAWDDVEKAFN
                     EGVPIKGRVMDRIKGGLRVDIDGIQAFLPGSQVDTRPVRNLDSLRGKEIEAKIIKLNR
                     KRSNVVLSRKAVLEEKNADRKGETLGQIEEDIIVEGQIKNLTDYGAFVDLGGIDGLLH
                     VTDMSWGRLQNPAEMFKVGDTVQVKVLRFDRDRERVSLGFKQLLPDPWETIEERFPPN
                     TRMNGKVASVTDYGAFIELEPGVEGLVHVSEMSWSKRVKHPSKLVGPGDAVEVEVLSV
                     DPKARRISLGMKQVQDNPWRTLGERYQVGDRVHGKVRNLTDFGAFIEIEDGVDGLVHV
                     SDISWSRRIKHPGELLKKGQAVDAVITGIDPENRRMSLSIKELEPNAWNDFVASHKPG
                     DVVKGKIARYASFGAFVELGDNLEGLCHISELSDERVNKPEDAVQLGQEMEFKVLRID
                     AENRKIGLSARAASNDDPIVEMKTYTSEAKGGMASLAELADFYTSKPTTESEES"
BASE COUNT          966 a         1339 c         1335 g         1055 t
ORIGIN      
        1 gtgacgccgg aatttgcacg gcaactgagc gagttgtcgc acgagacgaa tcgccagata
       61 ggcgtgctca tcgaccgcaa gggttacatt gaatatgtga cggtgggcga cgcgcgccgg
      121 atcgaattgc cggacttcaa gcgggtgcgc gtggcgggcg atcgttttcg cggattgcgt
      181 tgcgtgcaca cgcatctgcg tggcgaagaa ctgacgcgcg atgacctgac agacctggcg
      241 ctgctgcgac tggatttgat ggccgcgatc gatgttgacc agcgcacggg actgcccggc
      301 ctcgtgcgcg cggctcacat cctgccgtca cggccggcgg aagaaaacgg taagggtgat
      361 caattcggat tcctcgagcc cgcgctcccg agtcaactca acgtccattt cctcgagttg
      421 atggaagcgc tcgaagctga actcgcgcga aatcgcagga cagtaaaacg aacgggcgcc
      481 ggcgacgcgg tgattctcgt caacgtcacg accggatcga tcagcgaagc cgaggattcg
      541 atggccgaac tgcgcgagct ggctatttcg gcgggtgtcg tcgttctgga cgccgtgatt
      601 caacgtcggc agtccatcga tccgcgaacc gtgatgggca aaggaaagct ggatgagttg
      661 ctgattaggg cgatgcaact gggcgcggac gctttgatat tcgaccgcga gttacagccg
      721 gcgcaggtgc gttcgatttc cgaagccacg gatctgaaag tgattgaccg ctcacagcta
      781 attctggaca tctttgcgca acgcgcccag tcgcgcgaag gaaagattca ggttgaactg
      841 gcgcagctca aatacatctt gccgcgactg gtcgtcggcc aggactcagc attttcgcgt
      901 ttggccggtg gcatcggcgg ccgcgggccc ggtgaaacaa aactcgaaac cgatcgccgg
      961 cgcgtgcgcg atcgaattca tcggctggaa aaagaactcg cgtcgcagcg cggccatcgc
     1021 acgcagcgaa ggaaagagcg gctgcgccac gcggtgccgg ttgtttccat cgttggttac
     1081 accaacgccg gcaagtcaac gctgctgaat ctgctgactt cgagccacgt actcgccgaa
     1141 aagcggatgt tcgcgacgct ggatccaacg tcgcggcgtc tgcgacttcc gcgcgagaag
     1201 gaggtcatca tcaacgatac ggttggtttc atccgcgatc tgccgccgga cctgctggcc
     1261 gcctttcggt caacaattga agaaatcacc ggcagttccc tgctcattca tctcgtggac
     1321 gctgcaaatc caaggtggca gcagcaagtt gagtcggtga accgaacctt ggcggaactt
     1381 gaactgcgag aaatcccgcg cctgctggtc ttcaataaaa cggacctggt cgagcgcgcg
     1441 gacttagtcg cgatgcagcg ggaagttcaa accgaaacgg gaagtgagac tctggcgatc
     1501 tctgccacga atcgagcgac cctaccgcta ctgctggacc ggatcgaagc agccacgaga
     1561 ggttcttctg agtccgctca aaactttgaa agcagcttgc ggtaggtagt cggtaaatct
     1621 tcggacagca cgcgcgtatc gccaaccgtt gacatgaaat ttgtatcgcc gttccagcgc
     1681 ggcacgatgt gcagatgaaa gtgatcggcc acgccggcgc ccgccgcgcg tcccagattc
     1741 atgccaaggt tgaacgcatc cggatcataa acttcacgca gcgccgtctg gcagcgttta
     1801 gccaaatcca tcatttcgtc agtagcttct ttcggcgttg atccaaattc gccaaggtgc
     1861 gcgttcggcg cgatcatgag gtggccgctg atgtagggat acaggttgag aatgatgaag
     1921 ttgtgcgcgg cgcggtgcag cacgaaattc ttttcatcgt tggccgggtt ctgaaaagct
     1981 tcgcagaaga tgcagctgcc ttcagacatt ttggatccgg tggtaacgat gtattcgtgc
     2041 cgccagggac tccagagcct ttccacaacg tttcaggtcg acggttaacc gatggcgttg
     2101 tcgctcccgg cgacaaccgg agcacctgag gcttgattga ttagttcttt gagttccttg
     2161 ccggctttga agtaaggaac acgtttggct gggatgttta ccggctcgcc cgtcttcggg
     2221 ttgcgcccgc gacgcgcgcc acggccgcgt acgcgaaagc tgccaaaccc tcgcaactca
     2281 atcttctcgc ctttgttcag gctttgaatg atgctgtcga ataccagttc aaccaaacgc
     2341 tcggcatctt tcttcgtcag ctcggcggcg tttgctacat catcgacaag atcggccttg
     2401 gtcatgtaat cacctcgtac accactggtt tttcgagaga tgagttatcc ggcggtggag
     2461 taccttatca aacgctctgg ctcggagcaa ggtcgaaaga cttatgtggc aacagcttac
     2521 ggcaaatcgg gagctgcgtg tgtcccaccg cttctacgac tcctcggact cagtcgtcgg
     2581 tttgctggtg taaaaatccg ccagttcagc gagcgacgcc atgccaccct tggcctcaga
     2641 agtataggtc ttcatctcga cgatcgggtc atcgtttgac gcggcgcgcg cggacaagcc
     2701 aatctttcgg ttctcggcgt caatcctgag aaccttgaat tccatctcct gccccaactg
     2761 taccgcgtcc tccggtttgt taacgcgctc gtcggacaat tctgaaatgt ggcacaggcc
     2821 ttcgagattg tcgccaagtt caacgaacgc gccgaagctg gcgtatcgcg caatcttccc
     2881 tttaacgacg tcacccggtt tatgcgaagc aacaaaatca ttccaggcgt ttggttccag
     2941 ctctttgatc gaaagagaca tccggcgatt ctcgggatcg ataccggtaa taacggcatc
     3001 caccgcctgc cccttcttta agagttcgcc cggatgcttg atgcggcgcg accaggaaat
     3061 gtccgaaacg tgaaccagcc catcaactcc atcttcgatt tcaataaatg ctccgaagtc
     3121 ggtaaggttg cgaaccttgc cgtgaacgcg gtcgccaacc tggtatcgtt cgccgagggt
     3181 gcgccaggga ttgtcctgca cctgcttcat gccgaggctg atgcggcgcg ctttcggatc
     3241 cacgctgagc acttcaactt ccaccgcgtc accggggccg acgagtttgc tgggatgctt
     3301 cacgcgtttg gaccagctca tctcagatac gtgaaccaga ccttcgacac cgggttcaag
     3361 ttcaatgaac gcgccgtaat cggtcacgct cgccactttg ccattcatgc gggtgttggg
     3421 tggaaagcgc tcttcaatcg tttcccacgg atcgggcaaa agctgtttga agcccagtga
     3481 gacgcgttcc cgatcacgat caaaccgcag tactttaacc tgcaccgtat cgccaacctt
     3541 gaacatctca gccggattct gtagacgacc ccatgacatg tcagtcacgt gcagcaggcc
     3601 atcgatgccg ccgagatcga caaaggcacc gtagtccgtc aggttcttga tctggccctc
     3661 gacgatgatg tcttcttcaa tctgcccgag tgtctcgcct ttacggtccg cgttcttctc
     3721 ttcgagaacg gccttgcgcg agaggacgac gtttgatcgt ttgcggttga gcttgatgat
     3781 cttggcttcg atttctttgc cgcgtaacga atcaagattc cgaaccggac gcgtatccac
     3841 ttgcgaaccg ggcaggaatg cctgaattcc atcgatgtcc acgcgcagac cgcccttgat
     3901 acgatccatt acgcgacctt tgatcgggac gccttcatta aaggccttct cgacatcatc
     3961 ccaggcgcgc aatcgcacgg cgtcggcacg cgacagcact gggtagcctt cgctggtctc
     4021 catggccttg accataacgt ccacttcgtc accccgttta acggttaact cgccgttttc
     4081 catgaactcg gtggggttga cgatgccttc cgacttgtaa ccaaagtcga ttaacacgcc
     4141 gcgctcagtc acgccgacga cggtgccgcg cacgacttcg ccttcctgaa gagcggactg
     4201 ttcctgctcg aattgatcga gcagttggcc aaagtcttcg gtggacttgc ggcgctcgtc
     4261 ctcgtcaagt tgttcctgcg gaacggcagg ttcaggctcg ctactcagtt gagcagctgg
     4321 cgcgggggcg acggcggtcg ccgagttgtt gtcagaagaa gaattgttgg ttgtggtttc
     4381 gctttcgcga accccgttgg tttcgtcagt ggacatgaac actcctgctt aacgctttgt
     4441 caggcgctgt taacgccccg gcaaacgcgc gcgagagcca ctattgttct tagcggcgct
     4501 tcagttggtg attagtcgga ttggaaaatt tgagaggcga gcgttaagag ttggaaagga
     4561 ggtttcagtt tcgatttccg tcgtgcccgt agtctcccgc attggtccga ctatcaccga
     4621 tcgcgtgacc ggatgttcgg aatttacacg tcgccccgac tgagtgtcaa ggcgacggaa
     4681 aattcgtttc tgccg
//
LOCUS       DATDBY010000138         4338 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_306072, whole genome shotgun sequence.
ACCESSION   DATDBY010000138 DATDBY010000000
VERSION     DATDBY010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4338
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306072"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..328)
                     /locus_tag="VIT19_02690"
     CDS             complement(<1..328)
                     /locus_tag="VIT19_02690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837915.1"
                     /translation="MARIDDLLKLMRTQGASDLHLTSGSAPFMRINGEMFKQNYKSVS
                     AETCKSLIFEVLSDSQQEIFTERMDLDFSYPLQGVGRFRVNVFMQRHGIAACFRLIPE
                     QVKTITE"
     gene            complement(388..1617)
                     /locus_tag="VIT19_02695"
     CDS             complement(388..1617)
                     /locus_tag="VIT19_02695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly PilX N-terminal domain-containing
                     protein"
                     /protein_id="HEY5837916.1"
                     /translation="MNTQNPQNKGRDKNQRGAALITVLMMSTLMLATGGALVLVTGMS
                     NRTAIDATAERQAYYSAESGVQDTLNVLRGNVNPQAGMPAGSQIDFRKAVTASDSNRP
                     SDTSGLLRLSGWLNYSYTGADGSLRVPLTANYSPLTGLAYSVEVSDPDNTAVAAGEPT
                     RILIRVRGYGPKGSEKRLEAIIKRTTFDYAPPAMLMMRGAEDCAAMTFTIGESNAKDY
                     SGHDRNGSGILPAFGSTCDGDLTIEENSDGKETVELPKAAKFDNPSLPVWLRSANDAR
                     AFVDEQREDAQRQSRYFTSYDGSPQGFTFVDGDCDLDGGSGLLIVTGTLTMNGNPYFD
                     GLILVLGDGRVERDGGGNGEIYGAIAVARFNATGGFLPPFFDTNGGGTSTMKYDSSAL
                     RQALNAAGPRVLGIHEY"
     gene            complement(1630..2346)
                     /locus_tag="VIT19_02700"
     CDS             complement(1630..2346)
                     /locus_tag="VIT19_02700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEY5837917.1"
                     /translation="MSKSLIGKQSEDGFSLIELIIGMTITLVVLTVATTLLAQSLNLR
                     TRSNENVDALADAERALNIMSREIAQAGFNLDDNGIVPEDSVVDANGNSTIRIRANLN
                     RYDTDAGADARENISLAEADSGEDVKYFIHPAGTTTLLARYDRFGPVGSESTVLANRL
                     DSLRVHYFAQRVTYNTTDCDISAASAAEVSPAAARYIVIAVCVRQGATGAPGSPGYQP
                     AHNLLLTSDVALRNANLENY"
     gene            complement(2363..2857)
                     /locus_tag="VIT19_02705"
     CDS             complement(2363..2857)
                     /locus_tag="VIT19_02705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEY5837918.1"
                     /translation="MTRKLSLPKRKMQRRTHSSQAGFTLLETSIAMVLLGIAGLGVAA
                     CFFFAARNNSSARDRELSMAVAQQQMEQFRNASYSDAALNATAVNGVSSTVVRGGRSY
                     VVLTTITDTNVQSGTARTKTIQIRVSPWSDSERLARNITSVFGSVTIISQRTAPTIGP
                     NRAL"
     gene            complement(2873..3850)
                     /locus_tag="VIT19_02710"
     CDS             complement(2873..3850)
                     /locus_tag="VIT19_02710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837919.1"
                     /translation="MKRTAFSNARGFSTLQLVITVAVMSIVAGFAVVGITRARDHVRL
                     MNSARQFAAYVERARGDSVRRHASVANAATVSVTDNDTYAVNMDWDGFGAVSTRNFDL
                     EQGVRFTTVKSITFDWRGRIANEESFGFDNGRDQVNVHITGSGDVTFDTERFYDALIP
                     SSPGTGTGGGVTPEPGASPLPPPPPGTPTPTPDPNATPTPTPDPNATPTPTPDPNATP
                     TPTPDPNATPTPGVTPSPQPCVLNAPDSLTIVSDGSSTVSVNRTNITGTGTISATSSN
                     SGQIQVAPASRTVSGTAAGSFTITVKKNSGSVTFSSSGCTSKTVNITVP"
BASE COUNT          866 a         1214 c         1254 g         1004 t
ORIGIN      
        1 attcggtaat tgttttaacc tgctcgggaa tcagccggaa acaagcggcg atcccgtgac
       61 gctgcataaa gacgttgacg cgaaaacgtc ccacgccctg gagtggatag ctaaaatcca
      121 gatccatccg ttcagtgaag atttcctgct gactgtcgct aagaacttcg aagatcaagc
      181 tcttacacgt ttccgcagag acgctcttgt agttctgctt gaacatttcg ccgtttatgc
      241 gcatgaatgg cgcagagccg ctggtcaggt gcaagtcgga tgcgccttgc gtgcgcatta
      301 gtttgaggag gtcgtcgatt ctggccatgt tatttttctc ttggactatg gggcatgaaa
      361 atgggcaagg tggagttctt gcgctgctta gtattcgtgg ataccgagga cgcgtggtcc
      421 ggccgcgttc agggcctgtc gcagggcact cgagtcgtac ttcatcgtcg aagtgccgcc
      481 gccgttagta tcgaagaacg gcgggagaaa gccgcccgtt gcgttaaatc gggcgaccgc
      541 gatggcccca taaatttctc cattaccgcc gccatcgcgc tcgacacggc cgtccccaag
      601 aacgagaatc aggccatcga aatacgggtt gccattcatg gtgagagtac ccgtaactat
      661 cagtagtccg gatccgccgt ccaggtcgca atccccatcg acgaaggtaa aaccctgagg
      721 actcccgtcg tacgacgtga aataacggct ttgcctttgt gcgtcctcgc gctgctcgtc
      781 gacaaaagcg cgtgcgtcgt tcgcggaacg caaccagacc ggcaacgatg gattgtcaaa
      841 cttggcggcc ttgggaagtt caaccgtctc tttcccgtcg gaattttctt cgatcgtcag
      901 gtcaccatcg caggtcgagc cgaacgccgg aagaatcccg ctgccgttgc gatcatgccc
      961 cgaataatct ttggcgttac tctcgccgat ggtaaaagtc attgcggcgc aatcctcagc
     1021 gccacgcatc atcagcatcg ccggaggcgc gtagtcaaag gttgtccgtt taattatggc
     1081 ttccagtcgc ttctcggatc ccttgggtcc gtagcccctg acccgaatca gaatgcgagt
     1141 gggttcaccg gcggccacgg cagtgttgtc cgggtcgctg acttccaccg aatacgccag
     1201 cccagtcaac ggcgagtaat tcgccgtcag cggcacacgt agcgatccgt cggcacccgt
     1261 ataactgtag ttaagccatc cggagaggcg gagtaatccg ctagtgtcac tggggcgatt
     1321 cgagtcggag gccgtgacgg ctttacgaaa gtcgatttgg ctacctgcgg gcatgccagc
     1381 ctgggggttc acgttgccac gcaaaacatt cagcgtgtcc tgaacgccgg attcagcgct
     1441 gtaatacgcc tgcctctcgg ccgtagcgtc gatcgcggtt cggttcgaca tgcctgtcac
     1501 cagcaccaat gcaccaccgg tcgcaagcat cagcgttgac atcatcagca ccgttatcag
     1561 cgcggcgccg cgttggtttt tgtctcgacc tttgttttgc gggttctgag tattcattgc
     1621 aatctccaac tagtagttct cgaggttcgc atttcgcagt gcgacatcgc tggtcaacag
     1681 aaggttatgg gcgggctgat agcccggact gccgggcgcg ccagtggccc cttgccgcac
     1741 acacacggcg attacgatat atcgcgcggc ggcgggcgaa acttcagccg ccgacgcggc
     1801 gctgatgtcg caatccgtag tgttgtaagt gactctttgc gcaaaataat ggacgcgcag
     1861 gctgtccagg cgatttgcca aaaccgtcga ctcgctgccg accggcccga agcggtcata
     1921 tcgtgccagg agggtggtgg tcccggccgg gtgaatgaaa tactttacgt cttcgcctga
     1981 atccgcctcc gccagactga tgttttcccg cgcgtcagca cccgcgtcgg tgtcatatct
     2041 attcagattc gcgcgtatcc gaatcgtgct gttcccgttg gcgtcgacaa cggaatcctc
     2101 gggcacgatg ccgttgtcgt cgagattgaa accggcctgg gcaatctctc gcgacatgat
     2161 gttgagtgcg cgctcggcgt ccgcgagtgc atcaacattc tcgtttgagc gggttcgaag
     2221 gttcagggac tgtgccagga gggtcgtggc gaccgtcagc acgaccagcg tgatggtcat
     2281 cccaatgatt aattcgatta gcgagaagcc gtcttccgat tgttttccaa ttaaactttt
     2341 gctcatgaaa attagcctct cctcatagcg cgcgattagg accgatggtt ggggcagtcc
     2401 gctgagaaat aatcgtgacc gaaccaaaca cgctcgtgat atttcgcgcc agtctttcgc
     2461 tgtcgctcca ggggctgacg cgaatctgaa tcgtctttgt ccgcgcggtt ccgctctgga
     2521 cgttcgtgtc agtgatcgta gtgagcacca cgtagctccg gcctcctcgt acgaccgtgc
     2581 tggaaacccc gttgacggcc gtggcgttca gcgccgcgtc agagtacgaa gcattgcgaa
     2641 attgctccat ctgttgttga gccactgcca ttgagagttc acgatcgcgg gcactgctgt
     2701 tgtttcgcgc ggcaaagaag aagcacgcag ccactcctaa accggcgatc cccaacagaa
     2761 ccatggcgat tgacgtctca agcaacgtaa aacctgcctg gctgctatga gttctgcgct
     2821 gcatcttgcg tttcggaagt gaaagtttgc gagtcacgat taatctccca ggttacggga
     2881 ccgttatatt gacggtcttg gatgtgcagc cggacgacga gaaggtgacc gagccggagt
     2941 tcttcttgac cgtaatcgta aatgatccgg ccgcggtgcc actgacagtg cgcgaagcag
     3001 gagcaacctg aatttgacca ctgttactcg aggttgcact gattgtgccc gtgccggtga
     3061 tattcgtgcg gttcacgctt acagtgctcg aaccgtcgct gacaatcgtg agcgaatccg
     3121 gcgcgttcag cacacagggc tgtggcgatg gcgtcactcc cggtgtcggt gtcgcattag
     3181 gatccggtgt tggggtcggc gtcgcattag gatccggcgt cggggttggc gtcgcattag
     3241 gatcaggcgt cggggtcggc gtcgcattag gatccggtgt cggcgttggg gttcccggtg
     3301 gcggtggggg cagcggcgac gcgccgggct caggcgtcac gcctccgccc gtgccagttc
     3361 ccggtgagga tggaatcaaa gcgtcataaa accgctccgt atcaaatgta acgtcaccgg
     3421 atccggttat gtgtacgttt acctggtccc tgccgttgtc gaacccgaaa gattcttcat
     3481 tggcgatgcg gccgcgccag tcgaacgtga tcgactttac agtcgtaaat ctgacccctt
     3541 gctcgaggtc gaaattgcga gtgctgactg cgccgaatcc gtcccaatcc atgttaacgg
     3601 cgtaagtgtc gttatcagtg actgaaactg tcgcggcatt ggcgactgaa gcatgccgcc
     3661 gtaccgagtc tccgcgcgct ctttcgacgt acgccgcgaa ctgtcgcgcc gagttcatga
     3721 gccgaacgtg atcgcgggct cgcgtgatgc cgaccaccgc gaaacccgcg acgatcgaca
     3781 tcacggctac cgtgattacc agttgtagag tgctgaatcc gcgcgcgttg ctgaatgccg
     3841 ttcttttcat agtctgtcgt cggcgccttt cctcatttcg agtgcccgtc tgcataagga
     3901 cgggcgttgc tacatcgcaa tgtccatgcc agcccttttc acgtggtttt tgctggggat
     3961 ctgtgcgccc gtgccgcggg atggcacttc aggcgtaact ttgggtgaca gtgagtggaa
     4021 gtgtgcttcc taaccaaaat ccaaagtcca acgtccaatg tccaaggtcc tggctttacc
     4081 gcagacgtca aacacccgcg tttttagcct caggtgacac aagaggacaa tcgactttgg
     4141 acagaagaca ttggacattt gacgcgttgg gcattggacg ttggactttg gactaagtcg
     4201 catgttagtt tccgaattta ccggatcgtt tattgagaat actccctctg caagtgaggt
     4261 ttgcgcacaa gtgtcagcac ccgcagttga gttgaaacga acaccgctga atgaagcgca
     4321 tcgccgcctg ggcggacg
//
LOCUS       DATDBY010000139         8598 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_304318, whole genome shotgun sequence.
ACCESSION   DATDBY010000139 DATDBY010000000
VERSION     DATDBY010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8598
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304318"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3254)
                     /locus_tag="VIT19_02715"
     CDS             complement(<1..3254)
                     /locus_tag="VIT19_02715"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEY5837920.1"
                     /translation="MIAQRQSRLLALTLWCVACFTLLASATTLLGQPNNRTQRILVLY
                     WDNKDFPGNQKFDESFKAALQSQFAAELECYSEYFETTRFPGQDPGFFRDYLRQKYRG
                     RTIDVLVATADAPLNFLIANHADLFPNAPIVFVANDPPSGDKLSAGPGITGLIHQTTH
                     RQTLELALKLHPNTKQVFVISGSREGDKRFETIARREFSGFENKVQITYLTDLPLNEL
                     VPKTASLPPNSIALYMWQQALNEQGKLLETYEVIARISPSSAVPIYGLGTTNLGNGIV
                     GGYLTGALNNGRKVGEISVRILRGTPARDIPVEGAPAFPMFDWRELKRWRISETSLPA
                     QSIVSFKQFSFWDQYKQYVLAVLVLVIFQAALIAQLLFNQWKRRQAELETEKSHRRMR
                     EIISNVPGVVWESTIDPETKERKTTFISDHVRTMLGYTPEEWLAEPPGFGMRIMVEED
                     RAAAAHATEAALARGVDTDHQYRWRAKDGRLVWVESHLSPVLNQNGYAEGLRGVSLDI
                     TERKLAEESVEKTEEKNRAMIEAIPDLMFLQTRDGVYLDLHYSDPTNLVVPPQEYLGK
                     NMREILPPELADRFSHYFQRAIETRETQIVEYELTLKGEHRWYESRLVHCGENILSVV
                     RDITERREAELALGESERRLRLAQQAARVGTWEWDLRTGESVWSEMIWELLGLKQDDQ
                     PISAERFRECIHPDDRERAWNKAKEVIANGDDYDDEFRIVQPGGHVLWLSSKGRVFRS
                     TEGTAERMIGVNIDITERKLAEETARQTQQKETAILNAIPDLMFLQTRDGVFLDYHAK
                     NSKTLFVAPEKFLGKNMRDVLPSALASRLASCFERAEESSEPQILEYELLTAGREGWY
                     EARIVRSGENILSVVRDITERKQALDELRESEERFATAFRANPQPMTLTTLADGRYVD
                     VNDAFLAVSGYQRDEVVGHTALELRIWETPAFREDFIQKLKEGGTIVNLEIKVRTKDG
                     TRRLFLMSAELVDLGGEKCVLVASTDITERKRAEEALHESEEKYRTLFESIDEGFCVL
                     TLIYDESGRAVDYVFRVTNPAFERHTGWHNVVGVRVRELAPDLEEYWFEKYAQVA"
     gene            complement(3301..6411)
                     /locus_tag="VIT19_02720"
     CDS             complement(3301..6411)
                     /locus_tag="VIT19_02720"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5837921.1"
                     /translation="MRFPDETITSSVGDPVLPTRAPPTSTIKRSLPGSLKKLCCVAAC
                     SAILLLTGEVRAQSTSSLEGQITDQNDDVVAMAQITVVRRETRVTRIVVSDQGGWYQI
                     PSLPVGSYRIEVKAPGFQTQIVEQLTLEVGRRATQNFELQVGDVAQVISVVADSELIE
                     RSTTSFGQQVDSRMVADVPLNGRYFLDLGLLVAGSVTPPQGAFSSAPIRGLGSFAITT
                     AGNREETINYVINGITLNNLTFSSISFQPSIGAVQEYRIDNSTFSAQYGQSSGAVVNI
                     ATRSGASEFHGEVFEFFRNDALDARNYFNFNSSKPQPFKRNQFGAQLGGPIVRNRLFF
                     FFSYEGLRQQQQLDLNSLVLSDSERATISDPVVTRLLPLIPRANFIDSTGTPRFVGSA
                     NAQVKADQWSVDLSYNLGEKDSLHWYYNIYRTLLTEPSRNGNTVPGFGNTSIGLRQVF
                     TVNHTHIYGPSLVNELRLGFNRFSSTTTPNAQLNPTDFGINNGILEAIGFPQISVAGG
                     LNFGGPSANPSGRGDTMIVLNDSLSYQRGRHFLRFGGEFRQFLNNNFRQGTGTFNFPT
                     VASFIAGNANSFSITLGSQSSSITQNALGFFVQDNFKWRRNLTVELGLRYEWNISPTE
                     RYDRFIVFSPETASLIRVGTHLNEVYQQNNNNIQPRVGIAWDPFGDGKTSLRVGYALL
                     TDQPMTSVVLSTSTNPPLAIPLTFSGTIRLDNAINLAGAAGVAPQSINHDFGNAYVQS
                     WNLNVQREFTRNLGIMIGYFGSKGTHLIVRRNINQPINGVRPFPRLSLASPILPGVAL
                     GNITQVESAGNSSYNALWMTATQRLQRGLQFNASYTWSRSLDYNSFSTGGIVGQDGYS
                     LRGDRGLSDFDVRHRFVISALYDLPFRGPRLLEGWQIAVVVQSQSGNPVNIVTSDSVV
                     NSVAGTLRPDVNGPVRIIGSVDRWFDTSAFAAVPRFGNLGRNVVIGPGFNNADFSIIK
                     NTKLSDGLRLQLRAEFFDVFNHANFGQPGNVVGTPAFGRITNTRFPAGETGSSRQIQF
                     AVKLIV"
     gene            complement(6625..>8598)
                     /locus_tag="VIT19_02725"
     CDS             complement(6625..>8598)
                     /locus_tag="VIT19_02725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837922.1"
                     /translation="QVDKSLIIPKNVEGLKSEPPQIFLSRTPAILVSFDGEPIWSSIK
                     DNELKFAVNTNWDFFQYLPTNTYYLRDDATWLKATALGGPWTPAGKLPDSFKKLPADD
                     DNWKEVVLNLPGKAITQVPKVNVTTTPAELILINGAPKFVPVPATKLLWISNTESDLF
                     ALSPDGPLFYLVAGRWFWAPNFNGHWQFFTPHLPEDFKKISLEHPRSRVLASVPGTQQ
                     AAEAVLLAQVPQIARVSRNEIEAPTVIYDGEPSFEPIQGTQLQRAVNTDKDIIKSGDA
                     YYLCYQGVWFVSAGSTGPWGLATIVPEDVYQIPASSPAHHVTYVTVEKDDDENDDWIT
                     YAAVGGYTGMMIGWGCTVWGTGWYYPPYYYGGIYYPYWRTYGYGSWYNAYTGFYGTAG
                     RIYGPYGGVGFGARYNPNTGTYGRGAFAYGPYGARGAAQAYNPRTGTYAQTRQGSGVY
                     GSWGSTQVQRGDNWASTKRFTSSAGNTTRVTRGSEGGALVNRRGEGFVGKQGDNVYAG
                     RDGNAYRRDANGNWSKWDNGQWNQAQRPDQRNSARDSMLSKEGRARERAAERNGGTSG
                     DRVGQGGDRAGQGGNRPTQMDRSTYQGLNRDMAGRREGAQRSRDVGTYQNRSVSRPSN
                     NGSYRGGGGGFSRGGGGFSRGGGGGRGGGGRRR"
BASE COUNT         1851 a         2405 c         2377 g         1965 t
ORIGIN      
        1 gcgacctgcg cgtacttctc gaaccaatac tcctccaggt cgggcgcgag ttcgcggacg
       61 cgtacgccga ccacgttgtg ccagccggta tgccgctcga aggcggggtt cgtcacgcgg
      121 aagacgtaat cgacggcgcg accgctttcg tcgtaaatca gggtaaggac gcagaagcct
      181 tcgtcaatcg attcgaagag tgtgcgatac ttctcctcag actcgtgcag cgcttcttcg
      241 gcacgcttgc gttcggtgat gtcggttgag gctaccagca cacacttctc tccacccaga
      301 tcgaccaact ctgccgacat caggaacagt cgccgcgtgc cgtctttcgt gcgaactttt
      361 atctcgagat ttacgatcgt tccgccttct ttcaactttt gaataaagtc ttcccggaaa
      421 gccggcgtct cccatatgcg aagttccaaa gccgtgtgac cgacaacctc gtcacgctgg
      481 tagccgctca cggccagaaa cgcgtcatta acatcgacat agcggccatc agccagggtc
      541 gtcaaggtca ttggttgtgg attagcgcga aaggcggtcg cgaatcgctc ttcactttcg
      601 cgcagctcgt cgagcgcctg tttgcgctca gtgatgtcgc gtactacgct caaaatgttc
      661 tcgccactgc gcacgatccg agcttcgtac caaccctcgc ggccggccgt caaaagttca
      721 tattcaagga tttggggttc gctggactct tcggcccgtt cgaagcaact cgctaacctt
      781 gatgccaggg cggaaggcag cacgtcccgc atgttcttgc cgaggaactt ttcaggcgca
      841 acgaataagg ttttggaatt tttcgcatga tagtccagga aaactccgtc gcgtgtttgc
      901 aagaacatca gatcgggaat ggcatttaaa attgccgtct ctttttgttg cgtttgccgc
      961 gccgtctctt cagccagttt gcgctcagta atgtcgatgt tgacgccaat cattcgctca
     1021 gctgtgccct cagtcgaacg gaagacgcgg cccttggaag acaaccaaag cacatgcccg
     1081 ccgggctgga caatacgaaa ttcgtcgtcg taatcgtcac cgtttgcaat gacctctttg
     1141 gctttattcc acgcacgctc gcggtcgtcg ggatggatgc actcccgaaa tctctcggcg
     1201 ctgatcggct ggtcgtcctg tttgagtccg agcaattccc aaatcatctc tgaccataca
     1261 gactctccgg tgcgaagatc ccattcccag gtgccaaccc gagccgcctg ctgagcgagt
     1321 cgcaatcgcc gctcgctttc gcccagtgcg agctcagctt cccgccgctc ggtgatgtcg
     1381 cgaacaacgc tgagaatgtt ctcgccgcag tggacaaggc gtgactcgta ccagcggtgc
     1441 tcgcccttca gcgtcaattc atattcaacg atttgcgtct cgcgcgtttc gatggcccgc
     1501 tggaagtagt gggagaatct gtcagccaac tccggtggca gaatttctcg catgttcttg
     1561 ccgaggtatt cttgcggcgg cacgacgagg ttggttggat cactgtaatg gagatccagg
     1621 taaacaccat cacgagtttg caggaacatt agatcgggaa tcgcctcgat catggcccga
     1681 ttcttttcct cggtcttttc tacggactcc tcggccagct tgcgttcggt gatgtccagg
     1741 gaaacgccgc gcagaccttc ggcatatcca ttctgattca gaaccgggct taggtgggac
     1801 tcgacccaaa cgaggcggcc atctttggcg cgccagcggt attgatgatc agtatccacg
     1861 cccctcgcga gtgccgcctc agttgcgtgc gcggcggccg ctcgatcttc ttcgaccata
     1921 atcctcatgc cgaatcccgg cggttcagcc agccactcct ctggcgtgta cccaagcatg
     1981 gttcgcacgt gatcgctgat aaacgtggtc ttgcgctctt tcgtctcggg atcgattgtc
     2041 gattcccaaa ctacgcccgg cacgttggat atgatctcgc gcatccgacg atgggatttt
     2101 tctgtttcaa gttcggcttg tcggcgcttc cactgattaa acaaaagctg cgcgatgagg
     2161 gctgcctgga agatcacaag aacgagcacc gctaagacgt actgcttgta ctggtcccaa
     2221 aaactgaatt gcttgaatga gacaatgctc tgggccggaa gactcgtttc actgatgcgc
     2281 caccgcttca gctcgcgcca gtcgaacatc gggaatgcag gcgcaccctc gacaggaata
     2341 tcgcgagccg gagtaccacg caagatgcgg acggagatct ccccaacctt ccggccatta
     2401 ttaagagcgc ctgtcaggta gccacccaca attccgttac cgagattcgt cgtgccgagg
     2461 ccgtagattg gcaccgcaga cgaaggcgaa atgcgcgcga tgacttcgta agtctccaga
     2521 agttttccct gctcgttcaa cgcttgctgc cacatgtata gagcgatcga gttgggtggc
     2581 aggctggcgg tctttggaac caattcgtta agtgggaggt cagtcaggta cgttatctga
     2641 accttatttt cgaaaccgct gaactcacgc cgcgcgatag tctcgaatct cttgtccccc
     2701 tcacgcgatc cgctaatcac aaacacctgt tttgtattcg ggtgtaattt cagcgctagc
     2761 tccagggttt gccggtgagt agtttggtgg ataagcccag ttatgccggg cccggcggaa
     2821 agcttgtccc cacttggtgg atcgttcgcg acaaaaacaa ttggagcatt gggaaagagg
     2881 tcagcgtgat tggcgataag aaagttcagt ggagcatcgg ccgtggcgac cagcacgtca
     2941 atggttcggc cgcgatactt ctgccgtaga tagtcacgaa agaaacccgg atcctggccg
     3001 ggaaagcgcg tggtctcgaa gtattcggag tagcactcca actcggcggc gaattgcgat
     3061 tggagcgcgg ctttgaaact ctcgtcgaac ttttggtttc cggggaaatc cttgttatcc
     3121 caatagagca ccaggatccg ctgggtgcgg ttgttcggct ggccgagcag cgtcgtcgcc
     3181 gatgccagca gggtaaagca cgcgacgcac caaagcgtca gcgcgagcag tcgtgactgt
     3241 cgttgagcaa tcatgaggag agaacctgtc agttgtcgaa aatgagctcg taatgtttac
     3301 ctaaacaatc aactttaccg cgaactgaat ttgtcgagac gacccggtct cgcccgctgg
     3361 aaaccgcgta ttagtaattc ggccaaatgc cggtgtgccc acaacgttgc ccggttggcc
     3421 aaagttcgca tggttgaaga cgtcgaagaa ctcagcccga agctgcaggc gaaggccgtc
     3481 actcaattta gtgttcttaa taattgaaaa atcggcgttg ttgaacccgg gtccgattac
     3541 gacgttgcga cccaggttgc cgaaacgcgg caccgccgcg aaagccgacg tgtcgaacca
     3601 gcggtcaacg ctgccgatga tcctgactgg tccattaaca tcaggccgca acgtacccgc
     3661 cacgctgttc acaacgctat cgctggtgac gatgttgacc gggtttccgc tctgtgactg
     3721 aaccacgacg gctatttgcc atccttcaag aagtcgaggg ccacggaagg gcaaatcgta
     3781 taacgcgcta attacaaaac gatgtcgaac gtcgaaatct gaaagtccgc gatcgccccg
     3841 caggctgtaa ccatcctggc cgacaatccc cccggtgcta aaggagttgt agtccaagga
     3901 ccttgaccac gtgtacgacg cgttgaactg aagaccgcgt tggaggcgtt gcgtcgccgt
     3961 catccagagg gcgttgtaac tcgagttgcc ggcgctttct acctgcgtga tgttaccgag
     4021 tgccacgcca ggcaggatag gactagctag cgaaaggcgc gggaaaggcc gcacgccgtt
     4081 tatcggctgg ttaatgttgc gccgaacaat caagtgtgtc cccttcgagc cgaagtaacc
     4141 gatcatgata ccgaggttgc gggtgaactc acgttgcaca tttaagttcc aggactgaac
     4201 ataggcgttg ccaaaatcgt gattgatgga ctgtggcgcc acgcccgcgg ctccagcaag
     4261 gttgatggca ttgtcgagtc gaatggtccc actgaaggta agtggaattg ccaagggcgg
     4321 gttggtgctt gttgatagta cgacgcttgt catcggctga tcggtcaaga gggcataccc
     4381 aacacgcagg gacgtcttgc catcgccgaa cgggtcccag gcgatgccga ctcgcggttg
     4441 aatattgttg ttgttctgtt ggtagacctc gttgagatgc gtgccgactc gaattaacga
     4501 tgcggtctcc ggactgaaaa caatgaatcg gtcgtaacgt tcggttgggc ttatgttcca
     4561 ctcgtaacgc aatccgagct cgacggttag attccgccgc cacttgaagt tgtcctgcac
     4621 aaaaaatccc agcgcgtttt gcgtgatgct gctcgattga ctgcccagcg taatgctgaa
     4681 ggaattcgca ttgccggcga tgaacgaagc gacagtagga aaattgaagg tgccggttcc
     4741 ctgccggaaa ttattgttta ggaattgccg aaactcgccg ccgaacctca gaaagtgccg
     4801 gccgcgctga tagctcagtg aatcgttaag cacaatcatg gtgtcgccgc gtcccgaagg
     4861 gttcgcggac ggcccgccaa agttcagacc tccggccacg ctaatctgcg gaaaacctat
     4921 ggcttcaagg atgccgttgt tgataccaaa gtctgttggg ttcagttgcg cgttcggtgt
     4981 ggtggttgag ctgaaccggt tgaaaccgag tcgaagttca ttaaccagcg acggcccata
     5041 gatgtgggta tggttgactg taaatacttg ccgcaggccg atcgaggtgt taccgaaacc
     5101 agggacggta ttaccgttgc ggctgggttc ggtgagcaac gttcggtaaa tattgtagta
     5161 ccagtgaagc gagtcctttt ctccgaggtt gtagctgaga tcgaccgacc actgatcggc
     5221 tttcacctgc gcgtttgcgg atccgacgaa gcgcggcgtg ccggtcgaat cgatgaaatt
     5281 tgcgcgcggg attaagggaa gcagtctggt aactacggga tcacttatgg ttgcacgttc
     5341 ggaatcactc aataccagac tgtttagatc gagctgctgt tgctgccgca aaccctcata
     5401 tgaaaagaaa aagaacagtc tgtttcggac gattgggccg cccaattgag cgccaaattg
     5461 atttcgtttg aagggctgcg gcttgcttga gttgaagttg aagtaattgc gcgcatcgag
     5521 ggcgtcattg cggaagaatt caaagacttc gccgtgaaat tcggacgcgc ccgatctggt
     5581 ggcaatgttg acgaccgcgc ccgagctttg cccgtactga gcactgaaag tcgagttgtc
     5641 gattctgtat tcctggaccg cgccgatcga tggctgaaac gaaatcgaac tgaacgtcag
     5701 gttattgagc gtaatgccat taatgacgta gttgatggtt tcctctcgat tgcccgccgt
     5761 ggtgatagcg aacgagccca aaccgcgaat aggcgctgat gagaaggcgc cttgcggtgg
     5821 tgttaccgaa cctgccacca gcaaacccaa atctaaaaag taacgaccgt tgagcggcac
     5881 gtctgcaacc atgcggctat cgacctgttg cccaaaggac gtggttgatc tttcgattag
     5941 ttcactatct gcgacgacag agatcacctg agcgacatcg ccgacttgaa gctcaaaatt
     6001 ctgcgtggct cgtcgcccga cctcgagcgt aagctgctcg acgatctgtg tttgaaagcc
     6061 cggagctttc acctcgattc gataactccc aactggcagc gacggaatct gataccagcc
     6121 tccctggtct gacacgacaa ttcgtgtgac gcgtgtttcg cgtcgaacca cagtgatctg
     6181 agccatggcg accacgtcgt cgttctgatc cgtaatttga ccttcgaggg acgaggttga
     6241 ctgcgctcgg acttcaccgg tgagcaggag aatcgccgaa caggcggcaa cgcaacaaag
     6301 cttttttaac gaacctggga ggcttcgttt tatcgtgctc gtggggggcg cacgtgtagg
     6361 cagcacagga tcgccaacag aactcgtaat cgtctcatcg gggaaacgca tgtcttactc
     6421 ccaacgtttc gagacaccgg aaacgccccc gacacgctca ctatggatcc tggcgatgag
     6481 aactggcgtg gggagacgcg ctttgacctt agttcaaagc gttcaaataa actgcccgca
     6541 gtataccact cgtacgatag ggtacatata attagcgcaa actcttggag caacctaagg
     6601 agctttgaaa cgttaaggtt tttgctatcg tcgacggcca ccaccaccgc ggcccccgcc
     6661 gccgccacgt gaaaaaccgc cgccgccacg tgaaaaaccg ccaccgccac ctcggtaact
     6721 accattattg gagggccggg acacgcttcg gttttgataa gtgccaacat cgcgtgaccg
     6781 ctgagcgccc tcgcgacggc cagccatgtc tcgattgagg ccctggtagg ttgaccgatc
     6841 catctgcgtc ggcctattgc cgccctggcc ggcgcggtcg ccgccctgtc cgacgcgatc
     6901 gccgctcgtg ccaccgtttc tttcggcagc tctctctctt gcgcggccct ctttactcag
     6961 catactgtcg cgagctgagt tcctctggtc cggtcgctga gcctggttcc attgaccgtt
     7021 gtcccacttg ctccagttgc cgttagcgtc gcgacgataa gcgttcccat cgcggcctgc
     7081 atagacgttg tcgccctgct taccaacaaa gccttcgccg cggcgattca ctaaggcgcc
     7141 tccttcactg ccgcgcgtaa ctcgggtagt gttgcccgcg ctgctggtga atcgtttcgt
     7201 gctcgcccaa ttgtcgccgc gctggacttg cgttgaaccc cagcttccgt acacgcccga
     7261 accttgtcgg gtttgtgcgt aagtgccggt acgcgggttg taggcttggg ctgcgccccg
     7321 cgcgccgtac ggaccatacg caaacgctcc gcgtccgtag gtgccggtgt tggggttgta
     7381 tctcgcgccg aagccgactc cgccgtaggg cccataaatt cttcccgcgg taccgtaaaa
     7441 cccggtgtac gcgttgtacc aggatccgta tccgtaagtt ctccaatagg ggtagtaaat
     7501 gccgccgtaa taatacggcg ggtaatacca gccagtgccc cagacggtac agccccagcc
     7561 aatcatcatt cccgtgtacc caccaacagc cgcataggtt atccagtcat cgttctcgtc
     7621 atcatccttt tcaacggtca cataggtcac atggtgcgct ggagagctgg cggggatttg
     7681 atagacgtct tccggcacaa tcgtagccag gccccagggt cccgtggaac cagcggaaac
     7741 aaaccacaca ccctgataac acaagtaata agcatcaccg gatttaataa tgtctttgtc
     7801 ggtgttgact gcacgttgga gttgcgtgcc ttgaatcggt tcgaagctgg gttcaccgtc
     7861 atagatcacg gtgggcgctt cgatctcgtt tcggctgacg cgcgcaattt gcggcacttg
     7921 cgccaggagt acggcctcag cggcttgttg agttcccggc acagaggcca acacccgcga
     7981 gcgcggatgc tcgagcgaaa ttttcttgaa atcttccggc agatgcggcg tgaaaaactg
     8041 ccagtgacca ttaaagttag gcgcccagaa ccaccggccc gcgacgaggt agaacaaagg
     8101 accgtcaggg ctgagggcga acagatcact ctcagtattg ctaatccaaa gtagttttgt
     8161 ggccggcacc ggaacaaact tcggcgctcc attaatgaga atcaattcgg ccggcgtagt
     8221 ggtgacgttt accttcggaa cttgagtgat ggccttgccc ggcagattca gcaccacctc
     8281 tttccagttg tcgtcgtcag cgggaagttt cttgaagcta tccggcaact tccccgctgg
     8341 ggtccaggga ccgccgagag cagtcgcttt caaccaggtc gcgtcgtccc gaaggtaata
     8401 agtattggtc ggcaggtatt gaaagaagtc ccagttggta tttaccgcaa acttcagctc
     8461 gttgtccttg atcgaactcc atatcggttc gccatcgaag ctgactagaa tcgccggcgt
     8521 gcggctcaag aatatctgag gtggttcgct ctttaagccc tcgacgttct tcggaataat
     8581 caagctctta tcgacttg
//
LOCUS       DATDBY010000140         3634 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2548016, whole genome shotgun sequence.
ACCESSION   DATDBY010000140 DATDBY010000000
VERSION     DATDBY010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3634
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2548016"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..669
                     /gene="thyA"
                     /locus_tag="VIT19_02730"
     CDS             <1..669
                     /gene="thyA"
                     /locus_tag="VIT19_02730"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: protein motif:HMM:NF012524.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEY5837923.1"
                     /translation="GVDIWKEWADEEHTRRFGREAGDLGPVYGYLWRSFGGNYPKHDG
                     VDQIARLINEIETNPNSRRLIVSGWDPRECDNVDLPPCHTLFQFKIEQPASSPGSAGI
                     LPAIDRPILHCQLYQRSADAFLGVPFNISSYALLTHLVAHVCDLQVGEFIYTLGDYHI
                     YKNHLDQVNELLSRTPKPLPRLDVNDEEGKLRGLDGLLNFRYEQLSLVGYESHAKIAA
                     QVAV"
     gene            930..1157
                     /locus_tag="VIT19_02735"
     CDS             930..1157
                     /locus_tag="VIT19_02735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837924.1"
                     /translation="MKQKTQFAVCLNNKGYKASLEVGKLYRVIRDQQAEVHGLVRVVD
                     ETGEDYAFAADRFASMDVPPAVQKVLLSIRP"
     gene            1167..1652
                     /locus_tag="VIT19_02740"
     CDS             1167..1652
                     /locus_tag="VIT19_02740"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF012413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0005542 - folic acid binding [Evidence
                     IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEY5837925.1"
                     /translation="MSIIGIVAVDQNLAIGKGGKLPWHYSADMKFFKATTIGNTVVMG
                     RRTWETLKGPLKERTNIVLSRETKFTPAASVLVMRDVDSVLEFSRGRDEHLFVMGGAK
                     VYEAFLPHIDRWIVTEVPLSVEGADTFMPPNFLDGFEMYELRQLDEGLKVKFYERPAA
                     L"
     gene            complement(1890..3260)
                     /locus_tag="VIT19_02745"
     CDS             complement(1890..3260)
                     /locus_tag="VIT19_02745"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEY5837926.1"
                     /translation="MNYHDSVLGLIGNTPLIKLNRLNRGLKPLILAKMENLNPGFSVK
                     DRIGISMIDAAERAGKLKPGGTIVEATSGNTGIGLAIAASVKGYKCIFVMTDKASVEK
                     SRYLKALGADVVITPVSAKPGTPDHYVSTARRIAAETPNSFYPDQYSHPANPEAHYRT
                     TGPELWEQTEGRISHFVSGIGTGGTISGTGRFLKEKNPNIKIIGADPFGSIYKTYKDT
                     GKVPETTPYLVEGIGQEVLPPNAHLQYVDEVMNITDHDSFETARQLSRIEGIFCGGST
                     GTNCAAALRVAKDLDENAVIVFVVCDTGEHYLSKFHSDEWMKEKRLLEPQKITARLIN
                     ETKGRQAPRELVTVAPTDLVAAALAKMNEMGLTQIPVMVDGKSVGSLRENHLLSKVFT
                     DRDLLEAPVSKIMDKGFPTVDVDADVNVVSRKLRTNPAVLIEEYGRITGIITRHDVLE
                     MGENGD"
     gene            3520..3595
                     /locus_tag="VIT19_02750"
     tRNA            3520..3595
                     /locus_tag="VIT19_02750"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3553..3555,aa:Lys,seq:ctt)
BASE COUNT          795 a          994 c          991 g          854 t
ORIGIN      
        1 ggtgtggaca tttggaaaga gtgggccgac gaagaacaca cgcggcgctt tggccgtgaa
       61 gcgggggatc tcggcccggt ctatggatat ctttggcgtt ccttcggcgg aaactatccc
      121 aaacatgacg gcgtcgatca gatcgctcgg ttaattaacg agattgagac gaatccaaac
      181 tcgcggcgac tgatcgtcag cggctgggac ccacgcgagt gcgacaacgt ggatttgccg
      241 ccgtgtcaca ctttgttcca attcaagatc gagcagcctg cgagctcgcc tggaagcgcc
      301 ggcatcctgc ccgcaattga tcggccgatc ctccactgcc aactctatca acgctccgcc
      361 gacgcatttc tcggagtccc attcaacatc agctcgtacg cacttctgac ccacctcgtc
      421 gcgcacgttt gcgacctgca ggtgggcgaa ttcatttaca cgctcggcga ctatcacatc
      481 tacaaaaacc atcttgatca agttaacgag ttgctttcgc gcacaccgaa accgctaccc
      541 cggctcgacg ttaacgacga ggaggggaaa ttgcgcggtc tcgacggtct gcttaatttt
      601 cgctacgaac agttgagcct ggtcggttac gaatcgcacg caaaaatcgc cgcgcaggtg
      661 gccgtgtgaa actgacgaat ctcccacatg gatttcgaaa taattgggca gctgacccgt
      721 gttgaagtaa ttgccaaagg gccgagcgtc agagcgcgat ccagattgcg caaaaattat
      781 ggcggaacga gatggcgcaa actcaaagga gttgccaacg ttaggctgcc tgatggtacg
      841 atacggcttg cggagatcca ctggtacgaa gcgcacggtg tcggaaagag agaactcaaa
      901 atgaaattgc cttttctcga ttagccatca tgaaacaaaa gacccagttc gcagtttgcc
      961 ttaacaacaa agggtacaaa gcttcactcg aagttggaaa actgtatcgt gtaatccgcg
     1021 atcagcaagc cgaagtccac ggcctggttc gtgtcgtcga tgagacgggc gaggactacg
     1081 ctttcgcagc cgatcgtttc gcttcgatgg acgtcccacc tgcagtgcaa aaggtgctcc
     1141 tttctattcg tccttagctt acttcgatgt ccatcatcgg aatcgtcgca gtcgatcaaa
     1201 atctagccat cggtaaaggc ggcaagctgc cctggcacta ttctgccgac atgaagttct
     1261 tcaaagccac aacgatcggc aacacagtag tgatgggacg acggacgtgg gaaacgttga
     1321 agggaccgct gaaggaacga acgaatatcg tcctgagtcg cgagacgaaa ttcaccccag
     1381 cagcttccgt tctggtaatg cgcgacgtcg attccgtact ggagttctcg cgcggtcgcg
     1441 acgagcattt atttgtgatg ggaggcgcga aagtttacga ggctttcctg ccgcacatcg
     1501 accgctggat cgtcaccgaa gtccctttgt cagttgaagg cgcggacacg ttcatgccgc
     1561 caaactttct cgatgggttc gaaatgtacg agctaaggca gttggatgaa ggtttgaaag
     1621 tgaagttcta tgaaaggccg gcggctctct gaaggtatgt tggcttcgtc cgcgtcagcg
     1681 gacgtttgat tagcccagcg cttcagcgct gggttccgat gtcattaaga agttagagcc
     1741 cgcgacgcgg gcgacagatg acttaggcgt ctgtcgcccg cttcgcgggc tctggtcttg
     1801 gttcgttcgt ttacccagcc cctaaagggc tgggctacta taattcgtcg gctacgccga
     1861 cttcttgaag cagacggtac agccgccagt taatccccgt tttcgcccat ctccaaaacg
     1921 tcatgccgcg tgatgatgcc ggttatccgg ccgtactctt cgattaacac cgcggggttt
     1981 gtgcgcagct tgcgggaaac aacgttcaca tcggcatcga cgtcaaccgt cggaaaaccc
     2041 ttgtccatga ttttgctcac cggcgcctca agcaagtcgc ggtcggtgaa cacttttgaa
     2101 agcaagtgat tctcacgcag cgagccgaca gactttccgt caaccatcac cggaatctgc
     2161 gtcaagccca tctcgttcat cttggccaaa gccgccgcca ccaggtcggt cggcgcgact
     2221 gtcaccagct cgcgtggcgc ctgccggccc tttgtctcgt tgattaagcg cgcggtgatc
     2281 ttctgcggct caagtagtcg cttctctttc atccattcgt ctgaatggaa cttcgagagg
     2341 taatgctcgc ctgtgtcaca gacaacgaag actatcactg cgttctcgtc gagatctttc
     2401 gccacgcgca gcgccgcagc gcaattcgtt cccgtcgagc cgccgcagaa gattccttcg
     2461 atgcggctca actggcgcgc cgtctcgaac gagtcgtgat cggtgatgtt catgacctcg
     2521 tcgacgtact gcaagtgcgc gttcggcggc aggacctcct ggccgatgcc ttctaccagg
     2581 tagggcgtcg tctcgggaac tttgccggtg tctttgtatg tcttgtagat cgagccaaac
     2641 ggatcggcgc cgataatctt gatgttcgga ttcttctctt tcaggaatcg gccggtgccc
     2701 gaaattgttc cgccggtacc gatgccggaa acgaagtgag aaatcctgcc ttcggtctgc
     2761 tcccaaagtt cgggaccggt cgtgcgatag tgcgcttccg gatttgccgg atgcgaatac
     2821 tgatcgggat aaaaggagtt cggtgtttcc gcggcgatcc ggcgcgcggt cgaaacgtag
     2881 tgatctggcg tgccgggttt ggccgagacc ggtgtaatca ccacatcagc ccccaacgct
     2941 ttgaggtaac gcgacttttc aaccgacgct ttgtccgtca tcacgaagat acatttgtaa
     3001 cctttgacgg acgcagcgat cgccaaaccg atgccggtgt tacctgaagt cgcctcgacg
     3061 attgtgccgc cgggttttag cttgccggcg cgctcggccg cgtcgatcat cgaaatgccg
     3121 atgcgatctt tgacggagaa gccgggattc agattctcca tcttggcgag gatcagcggt
     3181 ttcaatcctc tattaagccg attaagttta attaaaggcg tgttgccaat caggcccaac
     3241 acgctgtcat ggtagttcat gtcggtttgc gagtattaaa cggagagaac attctgtgcg
     3301 aagtgcgtat gttttgacaa atcggaacgg ggttctttgc ctttctctgt gcctccgtga
     3361 accctctgtg cctcggtggt gggtttcgag aggaagactc accacagagt cactgagaac
     3421 gcacagagac acagaatcgt actgcaacat tgagaagaac ttagaattac acgagagctt
     3481 gactacattt tttcgcgccg tataattctc acttctcgcg gggcgttagc tcagttggta
     3541 gagcagcaga ctcttaatct gcgggtcgta ggttcgatcc ctacacgcct caccactttt
     3601 caaatcgaaa gcggcatctg tttgccgctt tttc
//
LOCUS       DATDBY010000141         2323 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2815286, whole genome shotgun sequence.
ACCESSION   DATDBY010000141 DATDBY010000000
VERSION     DATDBY010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2323
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2815286"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..430
                     /gene="queD"
                     /locus_tag="VIT19_02755"
     CDS             47..430
                     /gene="queD"
                     /locus_tag="VIT19_02755"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HEY5837927.1"
                     /translation="MPGQFEVMIERNFSSAHQLRGYRGKCENLHGHNYKIEIYARGKE
                     LNNIGLLVDFVELKQAADDLVAYLDHKNLNELEPFVVERNPSAENVARFVLEKLAAKI
                     NDERVQIYKVRCFETPTSVATYTVE"
     gene            complement(522..914)
                     /locus_tag="VIT19_02760"
     CDS             complement(522..914)
                     /locus_tag="VIT19_02760"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEY5837928.1"
                     /translation="MQSNPEDRRQSPRLDANLQARLEFSVLLREAENSQTGVQHMRAV
                     AGHTVNLSTIGLAVMLHAQNIDPQYLTGGENSMSIELDLPSGVSIEIEAMPVRYEKRD
                     DGYLIGARITEISERDRELYDEYLRELG"
     gene            complement(952..>2323)
                     /locus_tag="VIT19_02765"
     CDS             complement(952..>2323)
                     /locus_tag="VIT19_02765"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY5837929.1"
                     /translation="RILVVDDEPLMSDSLRQHLTDEGYAVDVSSSGTQAIDLFDGGAH
                     HLVICDLQLPDMDGLELLRHMKDAKPSTEVIVVTGYGSVQVAVEAIKSGAFYFVEKPF
                     DFEELLPLVEKALERRELVAETTNMRRQLSTRAEYFNIIGSSKPMQTIYETIESVAKS
                     DANVLIVGESGTGKELIANAVHYNSLRAKKPFIKVNCAALPKELIESELFGHTKGAFT
                     GAHADKEGLVQHAAGGSLMLDEIAEMPVELQPKLLRVLQERSCRKIGSEKSYPVDFRL
                     ICSTNRMPADAIRDGLLRDDLFYRISTITIHVPPLRERMEDIQLLSDHFFKEYSEKYD
                     RGLNGVSQSAYQRLFSHSWPGNVRELQNVIERAVLLAKGDRIEPVDLPFDNGTAPSAT
                     SPTMAWDVPPNMTLEDIEKFVIERTLQRTGGNKQKAANMLGIYRPRLYSKIKKYRIGA
                     EAVSAN"
BASE COUNT          512 a          630 c          643 g          538 t
ORIGIN      
        1 aagacgcgcg ccagctgcag cagcaagata cggatggcga ttaaacatgc ccggacaatt
       61 tgaagtaatg atcgagcgca acttttccag cgcgcatcaa ctgcgcggct atcggggaaa
      121 gtgcgaaaac ctgcacggcc ataactacaa gatcgaaatc tatgcacgcg gcaaagagct
      181 gaacaacatc ggcttgctgg tggattttgt tgagctaaag caggccgccg acgatctggt
      241 cgcgtatctt gatcacaaga acctaaatga gctcgagccg tttgtcgtcg aacggaatcc
      301 ttcggcggaa aatgtcgcgc ggtttgtctt ggaaaagctg gctgcgaaga ttaacgacga
      361 gcgtgtgcag atttacaaag tgagatgctt tgagacgccg acgagtgtgg cgacgtacac
      421 ggtggaatga aacggtctca agagtccaaa gtccaagtcc aaggcccgag atgcgtgttt
      481 tagacattgg acattagact ttggacgttg gactaacccg ttcagcccag ttcccgcaaa
      541 tactcatcat acaactcgcg atcgcgttca ctgatttcag tgatgcgcgc gccgatgaga
      601 tagccgtcgt cgcgcttctc gtagcgaacg ggcatggctt cgatttcgat cgaaacgcca
      661 ctcggcagat ccagctcgat cgacattgag ttctcgccgc cggtcaggta ttgcggatcg
      721 atattctgcg cgtgcagcat caccgcgagt ccaatcgtgc tgagattgac ggtgtgaccc
      781 gccaccgcgc gcatgtgctg caccccggtc tggctgttct cagcttcgcg cagcagtacg
      841 ctgaattcga ggcgggcttg aaggtttgca tcgagcctgg gagactgacg acggtcttca
      901 gggtttgatt gcacggtcgg gcttcctttt ttgttcgtcc tggtcgtttc gctagtttgc
      961 gctcacggcc tccgcaccaa tccgatactt cttgatctta ctgtaaaggc gcggccggta
     1021 aatgccaagc atatttgcag ctttctgctt gttaccgccg gtccgttgaa gtgtgcgctc
     1081 gatgacaaac ttctcgatgt cctcgagtgt catattaggc ggaacatccc aggccatcgt
     1141 cggtgaagta gcggacggcg cggtgccgtt gtcgaacggg agatcgacgg gttcgatccg
     1201 atcgcccttc gccagaagca ctgcacgctc gatgacgttc tgcaattcgc ggacgttacc
     1261 gggccaggag tgagagaaga gacgctggta ggctgactgc gatacgccat taagcccccg
     1321 gtcatacttc tcggaatact ctttgaaaaa gtgatcgctg agtaactgaa tatcctccat
     1381 ccgctcgcgc aaaggcggca cgtggatggt aatcgtcgag atgcgataaa agaggtcgtc
     1441 gcgcaaaagt ccgtcgcgga tggcatcagc cggcatgcga tttgtcgagc aaatcaggcg
     1501 gaaatcgacc ggataactct tctctgaacc gatcttgcgg cagctgcgct cctgcaatac
     1561 tcgcagcagt ttcggctgca actccaccgg catttccgcg atttcgtcca acatcagcga
     1621 gccgcccgcg gcatgctgca ccagaccctc tttgtcggca tgagcgccgg tgaaggcgcc
     1681 tttggtgtgg ccgaatagct cggactcgat cagttctttc ggcagagctg cacagttaac
     1741 tttgatgaaa ggcttcttcg cgcgcagcga gttgtaatga actgcgttgg caatcagttc
     1801 tttgccggtg ccggactcgc cgacgatcaa aacgtttgcg tcggacttcg cgactgattc
     1861 gatcgtttcg taaatcgtct gcatcggttt cgacgagccg atgatgttga agtactcagc
     1921 gcgcgtcgag agttgccgtc gcatgtttgt ggtttcagcc accaactcgc ggcgttcgag
     1981 ggctttctca accagcggca acaactcttc aaaatcgaat ggtttttcga cgaagtaaaa
     2041 cgcccctgat ttaattgcct cgaccgcgac ttgcactgat ccgtaaccgg taaccacgat
     2101 cacttccgtt gagggctttg catctttcat gtgccgcagc aactcgaggc catccatgtc
     2161 cggcagttgc agatcgcaaa tgaccagatg atgtgcgcca ccgtcgaaaa gatcgatggc
     2221 ttgagtgccg ctggaactta catcaaccgc gtaaccctca tccgtaaggt gttgccgcag
     2281 cgaatcgctc atcagcggtt cgtcgtcaac aaccagtatc cga
//
LOCUS       DATDBY010000142         6904 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_711644, whole genome shotgun sequence.
ACCESSION   DATDBY010000142 DATDBY010000000
VERSION     DATDBY010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6904
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_711644"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..797)
                     /locus_tag="VIT19_02770"
     CDS             complement(<1..797)
                     /locus_tag="VIT19_02770"
                     /inference="COORDINATES: protein motif:HMM:NF039936.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837930.1"
                     /translation="MKGLNMILRKTFLFVTVAAVLIGVFATSSSAQSRTRDRVTGPPS
                     LSLMAEPTVIRNCEGDAATVRLNANATANSGNALRYKWTANGGRISGTGANVTWDLAG
                     ARPGVYQAVVDVDEGDPNCAAFSSVAVVVTECPPEPPLPPSCPTVSVTCPDSASENAP
                     VTFSANVSGGSTNVTPTYNWTITAGRITSGQGTTSITVDTTGLAGQTIRATLDVEGYG
                     MPCPASCSVSLPIDVKARKFDEYYDIARNDEKARLDNYAIQLQNEPGA"
     gene            963..2114
                     /gene="aroB"
                     /locus_tag="VIT19_02775"
     CDS             963..2114
                     /gene="aroB"
                     /locus_tag="VIT19_02775"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEY5837931.1"
                     /translation="MPTVRVRLPAKSRIYDIQIGAGLLGDLGLAVRESSGQAARTVAV
                     ISNKTVFDLYGKTAADSLRRDGFAVKHFLVGDGERRKSFRSLEHIVAFFAKNGLQRND
                     VVVALGGGVVGDLAGFAAAVYLRGVPLVQVPTTLLAQIDSSVGGKTGINLASGKNLVG
                     AFHQPARVLIDTETLRTLPRRELTSGFCEMVKQGAVGSRKLFDQTVRLMRAGTHSSGV
                     QHAGDMRTGLAETIAAHCRFKASIVTGDEREDVSRTDRRSRRILNFGHTTAHAIEKVT
                     NYRRFRHGEAVGYGILVAGEVSKSLGMLPSGELELLRQAVALCGELPRADDLAVTRII
                     DAMTADKKVVEGKLKWVLLERIGKPRIVDSAEITGKVLRSALAAGLRSK"
     gene            2122..2514
                     /locus_tag="VIT19_02780"
     CDS             2122..2514
                     /locus_tag="VIT19_02780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837932.1"
                     /translation="MNHQTFLHNRGEHGGARLKFIIFLVIVVIVGYAGYMYIPVAIDA
                     YYFKDAMQNKVNLAAAQGHDAAWLSDQISKSKAEHNVPDDAVITPAQREGRVEVRVQF
                     KRPISTPLFTYNYDFDHTAQSTTFLTPK"
     gene            2929..4674
                     /locus_tag="VIT19_02785"
     CDS             2929..4674
                     /locus_tag="VIT19_02785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837933.1"
                     /translation="MKIKPTLILITLLAVFSCSAVRATPASAQAKLHFEVSFPAASSV
                     KPLDGRMLLLISNNNTREPRLQISEDPTTQQVFGIDVEGLKPGQTATVDAGAFGYPVR
                     SISQLKPGEYWVQALLHVYETFKRKDGHTVKLPMDRGEGQQWSSAPGNLYSTPVKLTI
                     DPGKDTSIKITLDKIIPPIEPPKDTKYIKHVRVQSKLLTEFWGRPMHIGAHVLLPEGF
                     DEHPNARYPLAIFHGHFPANIGGFRETPPDPNLKPDYSERFKLEGYNRIVQEHAHQFY
                     KEWTGPNFPRMLMIEIQHANPYYDDSYAVNSANLGPYGDAITYELIPYIEEKFRGIGK
                     GWARFMYGGSTGGWEAMAAQVFYPDEYNGAYIACPDPIDFRAYMVVDIYRHKNAYYID
                     DSWNKTPRPGKRNYLGELAGTIEDMNHMELALGTKGRSGGQFDIWEAVYSPVGADGYP
                     KPIWNKLTGEIDRSVAEYWREHYDLGYILKRDWQKLGPKLAGKLHIYVGEADNYYLNN
                     AVYLVEDFLKTTKDPAYGGEVDYEPRAEHCWNGDHTRSNALSRLRYHQMFMPRAVERM
                     LKTAPPGVDLKSWRY"
     gene            5696..6226
                     /locus_tag="VIT19_02790"
     CDS             5696..6226
                     /locus_tag="VIT19_02790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837934.1"
                     /translation="MQRALPEHFAAIVRELSESAGLDILLAPPDAQRSYVNLKFEREI
                     LSGRVAMTHSSNDFVNVLRTADVLVSNGGFGAVKLAVSLGVPVVCFGDQDDKPDVCGR
                     VRRSGVGIGFSWRISRRRIVDSIRRVLREAKFKERARVVGQELCQYDSSGRLEAAVER
                     LLRDEAPLLMLGDGGP"
     gene            6493..>6904
                     /locus_tag="VIT19_02795"
     CDS             6493..>6904
                     /locus_tag="VIT19_02795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837935.1"
                     /translation="MNVRPLSTAEEFQRYVDFNGEVYRENPHWVPPDAHHLTKVLAGQ
                     GGFGPELQIQPFWVEDGGRVLATVTAVTSPVYDRHWNEKMGHLLFFEALADQNEAVES
                     LLSAACDWLKTKGCEAARLSLLPGMQLPLTIDAYD"
BASE COUNT         1521 a         1953 c         1964 g         1466 t
ORIGIN      
        1 gcgcccggct cgttctgcaa ttgaatcgcg tagttgtcta aacgagcttt ctcatcgttg
       61 cgcgcgatgt cgtaatactc atcgaacttg cgcgccttga cgtcgatcgg aagtgaaact
      121 gagcagctcg ccggacaggg cattccgtaa ccctcgacat ccagcgtcgc ccgaatggtc
      181 tgacccgcta agccggttgt atcaaccgtg atactggtcg tgccctggcc gctggtgatg
      241 cggccggcgg tgatcgtcca gttgtaagtc ggcgtcacgt tggtcgaacc accgctgaca
      301 ttcgcgctga aggtcaccgg cgcattctca ctcgcagagt ccggacaggt gacgctgacc
      361 gtcgggcagc tcggcgggag cggaggctcc ggcggacact cagtcaccac cacggctacc
      421 gaagaaaacg ctgcgcagtt gggatcccct tcgtcaacat cgactacggc ctggtaaaca
      481 ccgggtctcg cgccggccag gtcccaggtg acgttcgcgc cggttcctga aattcggccg
      541 ccgttcgcgg tccacttgta acgcagcgcg ttcccggaat tcgccgtcgc attcgcgttc
      601 agccggacgg tcgccgcgtc gccttcgcaa ttacgaatga cggttggttc ggccatcagg
      661 gagagcgaag ggggaccggt cacgcgatcg cgcgtacggc tctgcgccga cgacgacgtc
      721 gcgaatacac cgataagaac cgccgcgaca gtaacaaaca ggaaagtctt gcgaagtatc
      781 atgttaagcc ctttcatctg gccgcccggg caattgagcc gccaatcctt cgatttgcga
      841 agctgaagct tccgctcctc tggaaaacca gagataacaa gcaaataaaa gagccaattg
      901 gggtggcttt ccaaacgggc cgggctttca gagaccgccg cgctgtaata aagtctaagc
      961 ccatgccgac cgtccgcgtg cgcctgccgg cgaaatccag gatttacgac atccaaatcg
     1021 gcgccggatt gctgggcgac ctggggctgg cggtccgcga aagctccggc caagcggcgc
     1081 gcacggtcgc agtcatctcc aacaaaaccg ttttcgactt gtacgggaaa acagctgccg
     1141 acagtctgcg aagggacggt ttcgctgtca agcatttcct ggtcggcgac ggcgagcgcc
     1201 ggaaatcgtt tcggtcgctc gaacacatcg tcgccttctt cgctaagaac gggctgcaac
     1261 gcaacgatgt ggtggtcgcg ctcggcggtg gagtggttgg cgacctggcg ggtttcgccg
     1321 ccgccgttta cctccgcggc gttcctctcg tgcaagtgcc caccacgcta cttgcgcaaa
     1381 tcgattcatc agtcggcggc aaaaccggaa tcaatttggc atcgggaaag aaccttgtgg
     1441 gcgcgttcca tcaaccggca agggtcttga tcgatacgga gacactacgc acgctgccgc
     1501 gacgcgagct gacttcgggg ttctgcgaga tggtaaagca gggtgcggtc ggcagccgca
     1561 aactgttcga tcaaactgtg cgactgatgc gcgcgggtac gcactcctcc ggagtgcagc
     1621 atgccggaga tatgcgtacc ggcttggccg aaacaatcgc cgcccactgt cgcttcaagg
     1681 cttcaatcgt gaccggcgac gaacgcgagg acgtttcgcg cactgatcgt cgctcgcgtc
     1741 gcattctgaa ttttggccac acaacggcgc atgccatcga aaaagtcacg aattaccggc
     1801 gcttccgtca tggcgaggcg gtcggttatg gaatcctggt cgcgggcgag gtttcaaaaa
     1861 gtctaggcat gctcccgtcc ggcgagttag aattgctgcg ccaggcggtc gcgttgtgcg
     1921 gggagctgcc gcgcgcagat gatctcgctg tgacgcggat cattgatgcg atgacggccg
     1981 acaagaaagt cgtcgaaggc aaattgaaat gggtcctgct tgaaagaatc ggcaaacccc
     2041 gcattgtcga ttccgcggaa atcacaggga aggttcttcg ctctgctcta gccgcaggct
     2101 taaggtcaaa atagttttgc tatgaatcac caaacattcc ttcacaaccg aggcgaacac
     2161 ggcggcgcgc gcctgaagtt catcatcttt ctggtaattg tcgtaattgt gggttacgcc
     2221 ggttacatgt acatccccgt cgccatcgac gcctactatt tcaaggacgc gatgcagaac
     2281 aaggtgaatc tggcggcggc gcaaggccac gacgcagcct ggctttccga tcagatttcc
     2341 aagagcaagg ccgaacacaa tgttcccgac gacgcggtga ttacacccgc ccaaagagaa
     2401 gggcgcgtgg aagtgcgcgt ccagttcaag cggccgattt caacacccct tttcacctac
     2461 aactatgatt tcgatcacac cgcgcagagc acgacctttc tgacaccgaa gtagtgcggt
     2521 agggttttcg cgttaatcgc gcttcgcttc gtgcgcaagg ccttctcatt cacacctcgc
     2581 ttcagcgagg tgatcctgca ggctgcctga aaatgtggca accgtttcaa cggtttgtga
     2641 gccgaagccg ttgaaacgct atgagacttg agcgcgccag ggtgacgccc gcaatggttc
     2701 ttgccgtgcg agcggctcgt ggaatatcct ccgcgtcgtc accacgcgcc gtaggcgcga
     2761 aatgtttata gatccagtcg taaaagacaa cgaggggtga aggacgaagg tgctcggccc
     2821 ttcgttcttc acccccagcc atgaatcgcg cgtggttcta taaatattct gccgctctgc
     2881 ggctgttgca actgatcaag cgcggcccga tttagctcgg agactcgaat gaagataaaa
     2941 ccaacactta ttctgatcac tttactcgct gtattttcat gttcagctgt cagagccacc
     3001 ccggcatcag cgcaagccaa acttcacttt gaagtctcat ttcctgctgc cagcagcgtg
     3061 aagccgcttg atgggcggat gcttctgctc atctcgaaca acaacacgcg cgagccgcgc
     3121 ctgcaaattt ccgaagatcc aaccacgcag caggtcttcg gtatcgacgt cgagggttta
     3181 aagcccggcc agaccgccac ggttgacgcc ggcgcgttcg gttatcccgt cagatctatt
     3241 tcgcaattga agccgggtga gtattgggtg caggcgctct tgcacgttta cgaaactttc
     3301 aaacgtaaag acgggcacac ggtgaagctg cccatggatc gcggcgaagg ccagcaatgg
     3361 agcagcgcgc cgggaaatct ctacagcacg ccagtcaagc tcaccattga tccgggcaag
     3421 gatacgtcga ttaagatcac tctcgacaag attattccgc cgatcgagcc acccaaagac
     3481 acgaaataca tcaagcacgt acgtgttcag agcaagctgc tcactgaatt ctggggccgg
     3541 ccgatgcata tcggcgcgca cgtgctcttg cccgaaggct ttgacgaaca tccgaacgcg
     3601 cgttacccgc tggcgatttt ccacggacac tttccagcga acatcggcgg ctttcgcgag
     3661 acgcctccag atccgaatct gaaacccgac tacagcgagc gcttcaaact cgaaggctac
     3721 aaccgcatcg ttcaggaaca cgctcatcag ttttacaaag aatggaccgg gccgaacttt
     3781 ccccgcatgc tgatgatcga gattcagcac gcgaatcctt actacgacga ttcgtacgcg
     3841 gtgaactcgg cgaacctcgg gccatacggc gacgcgatca cttacgagtt gattccttac
     3901 atcgaagaaa agtttcgcgg catcggtaaa ggctgggcgc gattcatgta cggcggctcg
     3961 accggtggct gggaagcgat ggccgcgcag gttttctatc ctgatgaata caacggcgcg
     4021 tatatcgcgt gtcccgaccc aatcgatttt cgcgcctaca tggtcgtgga tatctaccga
     4081 cacaagaatg cctactacat cgacgattcg tggaataaaa cgccgcgccc gggcaagcga
     4141 aactatctgg gtgagctggc aggcacgatc gaagacatga atcacatgga gctggcgctc
     4201 ggcacgaagg gccgttcagg cgggcagttc gacatctggg aagctgtcta ttcgcccgta
     4261 ggcgccgacg gttatccaaa acccatctgg aacaaactga ctggagagat tgatcgatca
     4321 gtagctgagt actggcgcga gcattacgat cttggctaca tcttgaaaag agattggcag
     4381 aagcttgggc cgaagctcgc cggaaaactt cacatctatg tgggcgaggc agacaactat
     4441 tatctgaaca acgccgtgta tttggtcgaa gactttctca aaaccacgaa agatccggcc
     4501 tatggcggtg aagtcgatta cgaaccgcgc gccgagcact gttggaacgg cgaccatacg
     4561 cggtccaacg cgctctcgcg tctgcgctat catcagatgt tcatgccgcg cgccgtcgag
     4621 cgcatgttaa agactgcgcc gccgggagtg gacttgaaga gttggaggta ttgagttgcg
     4681 tccgaggatg cgtcttcgtg aacccgcgga gcgggtgtta gcataaagcc tggagcgtaa
     4741 gccccaggga agggcgccaa aaacattaat agcccgcgaa gggcggcaga cctggcgctt
     4801 ccagtttgaa agatgacgaa ctcgattcgc gattggtttt gattccgctg tcgcccgctt
     4861 cgcggggcgg tgacccccac gggccatggc caaaatacta gtatcgacgc tcccggtggc
     4921 tggacacgta aacccggcta gggccgttgc agagaaactc atagccgcag ggcatactct
     4981 cgttttcgct ctaccaaccg ggcaaaccaa acttgtcggc ccttcgctcg tctgcaaacc
     5041 aacaacaacc gatgagtttt cctatgagcc aacaaacctc cgatccttac gcgctcgtga
     5101 cattcaaaag attgaggaca acatcaaata cgttttggcc gactggaccc tctgcgagct
     5161 aagtagctta cgaacgatat cggaaagcta tgatcctgat ttgatcattt cggactgtct
     5221 tcacccagct cccctgattg tcgcacatga gaggcatgtc ccttcagcag ttcttggggt
     5281 cacgccatat cggaatccgc tcaggggaag cgctcccctc ggctccggct tcgagccggc
     5341 gagtagacgc gtcggaatcg cgacgtacac cgctttaaat cgcgcgatac gcacaagatt
     5401 cagagatgcg acagcttatt tgaagagccg gttgctggaa gcgtcaccca tacttaaacc
     5461 agttttggag gatgaggccc ctgaagtttt tggtatatgt cacaagctgg gttcggcgta
     5521 tttccagtgc agcagcccgt ctctcgaaga caatccagat ctccttcaag aatgtggtgt
     5581 tgagttcatc ggtccgatga atcttccgag cttgtctctc tctcataatg caaacgctca
     5641 tgcaccccca actcacactc gtatcaaggc ccgtgttgtc attacttggg gtaccatgca
     5701 acgggcacta cccgagcatt tcgctgcaat cgtcagagag ctgagtgaga gtgccggcct
     5761 ggacattctt ctagctccgc cagacgcaca aaggagctac gtcaacctta agtttgagcg
     5821 cgagattcta tccgggcgcg tggctatgac ccacagttcc aacgattttg tgaacgtgct
     5881 cagaactgct gacgtgcttg tcagcaacgg cggctttggg gctgttaagt tggcggtatc
     5941 gcttggcgtt cctgtcgtct gcttcggaga tcaggacgac aaacctgacg tttgtggacg
     6001 cgttcgtcgc tctggagtcg gcattggttt ctcgtggcgt attagccgta ggcgaattgt
     6061 cgattccatt cgccgtgtcc ttcgtgaagc taaattcaaa gagcgggcgc gcgtggttgg
     6121 tcaggagttg tgccagtacg actcctcagg ccggttggag gccgccgttg agcgcctact
     6181 cagggatgaa gccccgttgc tgatgttagg tgacggaggg ccgtgatggg cttgctcact
     6241 agggactaaa ctctgccgcc gccccgcggc tggttgaggt tctcttatgg aaaattacct
     6301 aaccaccaaa ttattccttc cactaatcct cgccaccaat cgccacgagc ggaagagtgt
     6361 cttcgttgcc cagtggctgt ttggagaaat ggaaaaagcg cgccgagatc gagacgcgtc
     6421 ttttcgacgt tgcagattcg cgctgccgca aggtgaccat ggtcagggcg gcgacagagg
     6481 agaattgcca ttgtgaatgt ccgaccactg agtaccgccg aagagttcca gcgttatgta
     6541 gactttaacg gagaggtcta tcgcgagaac ccgcattggg tcccgccaga tgctcatcat
     6601 ctaacaaagg tgctggcagg tcagggcggt ttcggtcccg agttgcagat ccagcctttc
     6661 tgggttgagg acggcgggcg tgtgttggca acggtcacgg cggtaacgag cccggtttac
     6721 gaccggcatt ggaacgaaaa gatgggccat ctgcttttct tcgaagcgct ggctgatcag
     6781 aatgaagccg tcgagtcgct tctgagcgcg gcgtgtgact ggctcaaaac gaaaggctgc
     6841 gaagcggcgc gactctcgtt gttgccggga atgcagttgc cactcaccat cgacgcctac
     6901 gacg
//
LOCUS       DATDBY010000143         6162 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2752356, whole genome shotgun sequence.
ACCESSION   DATDBY010000143 DATDBY010000000
VERSION     DATDBY010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6162
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2752356"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..201)
                     /locus_tag="VIT19_02800"
     CDS             complement(<1..201)
                     /locus_tag="VIT19_02800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L17 family ribosomal protein"
                     /protein_id="HEY5837936.1"
                     /translation="MRHRKAHRKLGRDSEHRMSLLRNLATSLINSRDERIITTVPKAK
                     ELRPFVERAITLSRHAASLEGNG"
     gene            complement(211..1287)
                     /locus_tag="VIT19_02805"
     CDS             complement(211..1287)
                     /locus_tag="VIT19_02805"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF003513.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEY5837937.1"
                     /translation="MDQNNLWTGFQMPRRLAADGDTLTERYGRFSAQPFERGFGTTVG
                     NSLRRALLSSIEGSAITAVKIEGVEHEFSSIKGTVEDATDVILNLKQVPFKLHGNEPK
                     TLTISKNGPGEVTAGDIEGDADIEILDPTLHIATLSAGGSLNIEMRLKRGRGYVSADR
                     NFDEDLSLGYIPIDSVHTPVKKVNYSVDAARLGQNTEYDKLTIEVWTDGSVKPDDAIG
                     LAAKLIKDHMAIFINFEEDMEDYSYQQAERAPLPRNDQLDRSVDELELSVRSYNCLKN
                     AGIKSIRDLVQRSEREMLATKNFGKKSLGEIRDILRSMGLDFGMQFDEQGNPIPGTGD
                     GELSLEGEGGDDENGEDEFETAVQ"
     gene            complement(1356..1994)
                     /gene="rpsD"
                     /locus_tag="VIT19_02810"
     CDS             complement(1356..1994)
                     /gene="rpsD"
                     /locus_tag="VIT19_02810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002614801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEY5837938.1"
                     /translation="MARYRDAVCRLCRREGAKLFLKGDRCYKPSCPIEKRGTQPPGQH
                     GNSMRRGKALAGYGQQLREKQKVKRIYFILEGQFRNYFERAARQKGITGENLLFLLER
                     RLDNAIYRAGFSTSRRQARQLVNHGHVLVNDRKVDIPSYQVKPGDSLTIKDASRKNPH
                     VEGAWQTAAGRGRPSWVSAGGGEMAATVTGLPTRDDIDRSINEQLIVELYSK"
     gene            complement(2198..2602)
                     /gene="rpsK"
                     /locus_tag="VIT19_02815"
     CDS             complement(2198..2602)
                     /gene="rpsK"
                     /locus_tag="VIT19_02815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEY5837939.1"
                     /translation="MAKASAGGKKKVFRKKEKKHIPSGIVYIAASFNNTMISITDLEG
                     NLIAQSSSGARGFRGSRKGTPFAAQQAAYEAAKKAMESGMSQCEVRVKGPGGGRESAI
                     RAINNAGIRVMAIRDTTPIPHNGCRPPKRRRV"
     gene            complement(2602..2985)
                     /gene="rpsM"
                     /locus_tag="VIT19_02820"
     CDS             complement(2602..2985)
                     /gene="rpsM"
                     /locus_tag="VIT19_02820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009125149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEY5837940.1"
                     /translation="MARVAGVDLPPNKRAEIGLTYIYGIGRSRSASILNEAQISLETR
                     VRDLSEEELSRIRAILEAQGEIEGDLRKRIQMDIKRLMDIGAYRGLRHRRGLPVRGQR
                     THTNARTRKGPRRATVAKKKAPGKK"
     gene            complement(3058..3171)
                     /gene="rpmJ"
                     /locus_tag="VIT19_02825"
     CDS             complement(3058..3171)
                     /gene="rpmJ"
                     /locus_tag="VIT19_02825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEY5837941.1"
                     /translation="MKVRASVRKICDKCKVIHRKGVVRVICTNPKHKQRQK"
     gene            complement(3300..4085)
                     /gene="map"
                     /locus_tag="VIT19_02830"
     CDS             complement(3300..4085)
                     /gene="map"
                     /locus_tag="VIT19_02830"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR00500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEY5837942.1"
                     /translation="MIIGKSQKEIEKMRASGQLVGRVLRELRRMAAPGVTTIEINDAA
                     DQMIRDAGAYPTFKGYNGFPYSICASVNEQVVHGFPSKYELKEGDIFSIDVGATLDGF
                     VGDTATTVPVGRVGDDLLKLIRVTEESLQLAIDHCRAGNHIGDIGYVVQQHAESHGYS
                     VVREYVGHGIGRQMHEDPQIPNYGKPGKGPKIKKGYVFAVEPMINIGSQHTKTLADGW
                     TVVTVDGRPSAHVEHTIAITEEGPEVLTLVKEEVNADSQTVAA"
     gene            complement(4098..4730)
                     /locus_tag="VIT19_02835"
     CDS             complement(4098..4730)
                     /locus_tag="VIT19_02835"
                     /EC_number="2.7.4.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050145 - nucleoside monophosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside monophosphate kinase"
                     /protein_id="HEY5837943.1"
                     /translation="MSKIIVLMGAPGAGKGTQARLLQERMNLPQISTGDMLRAMAAED
                     IHSTQASGRLISDDVVIEMVRKRTAGEDCKNGYVLDGFPRTTVQAEMLEKLAHEQGSS
                     IQGIFVDVPYDVLQQRLTGRRTCPICGEIYNIYFKPPRFDNRCDLHPEQELTFRADDA
                     PEKIRVRLDTYERQTAPLLDYYDHSGRLERIDGTRPPAEIYSQIERVIKA"
     gene            complement(4740..>6162)
                     /gene="secY"
                     /locus_tag="VIT19_02840"
     CDS             complement(4740..>6162)
                     /gene="secY"
                     /locus_tag="VIT19_02840"
                     /inference="COORDINATES: protein motif:HMM:TIGR00967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEY5837944.1"
                     /translation="VFLMEKFLAAVRNMFSVPDLRKRIFFTLGLLAIYRLGAHISTPG
                     INRERLDQVWQDVSGTLLGVLDLFSGGNFRVISIFALGVTPYITASIILQLMTVVSPQ
                     LKKLQEEGEMGRQKINQWTRYLTVGLGALQTSFVAHWLQINGVGAPTWSFMLTTVLTL
                     TTGTIFVMWLGEQITERGVGNGISLLIFSGIVIGLPNGVQQVMGRVSSGDTLEILGVI
                     VMVAAIVLVIAFIVFVESARRKIPVSYAKRHVGRQMVGGQQTTMPLKLNMGGVIPVIF
                     ASSVLSMPQSLFSALPPSNPGNWYGKIFAFFQVFHAGDPYYELIFLSLIILFTFFYVS
                     IVFNVEEVADNLRKHGGFMPGIRPGRATAEYLNTILTRLTFVGAIYLAAVAFLPQFML
                     SGYRVGRLPFIGPWLDAFVSTTPGLGWIPTGMGYQFYFGGTSLLILVGVAMDTVAQIE
                     AQLVMRNYEGFLGSGGRLRGRRA"
BASE COUNT         1279 a         1838 c         1634 g         1411 t
ORIGIN      
        1 tccgttgcct tcgagactcg ccgcatggcg cgacagagtg atcgcgcgct caacgaacgg
       61 gcgcagctct ttggccttgg ggaccgtcgt gattatgcgc tcgtcgcgcg aattgattag
      121 ggacgtcgcg aggtttcgca gcagcgacat gcgatgctcc gaatctcgtc ccagttttcg
      181 atgtgcctta cgatgacgca tagccttgtt ctactgcact gccgtttcaa attcgtcttc
      241 gccgttttcg tcgtcgccgc cttcgccttc gaggctcagc tcgccgtcgc cggtgccggg
      301 aatcggattg ccctgctcgt caaactgcat tccgaaatcc aggcccatgc tgcggagaat
      361 gtcgcgaatt tcgcccagcg actttttgcc aaaattcttc gttgccagca tctctcgctc
      421 ggaacgctgc accagatcgc gaatcgattt aatgccggcg ttcttcagac aattgtaaga
      481 gcgcaccgac agttccagct catccaccga gcgatcgagt tgatcgttgc gcggcaaggg
      541 tgcgcgctcg gcttgctgat agctgtaatc ttccatgtcc tcttcaaagt taataaagat
      601 cgccatgtga tccttgatta actttgcggc caacccaatc gcgtcgtcgg gcttgaccga
      661 accgtccgtc cacacttcga tcgtcagctt gtcgtattcg gtgttctgcc cgagacgggc
      721 ggcatcaacc gagtagttca ccttcttgac cggcgtgtgc accgaatcga tcgggatgta
      781 accgagcgat agatcttcgt cgaagttgcg atccgccgac acgtaaccgc ggccccgctt
      841 caggcgcatc tctatgttca acgacccgcc tgcgctcaga gtggcgatgt gcaaggtcgg
      901 atcgagaatc tcgatgtccg cgtcgccctc aatgtcgccg gcggtgactt cgcctggccc
      961 attctttgaa atcgtgagcg tcttcggctc gttgccgtgc agcttgaacg gcacctgttt
     1021 caagttcagg atgacgtccg tcgcatcttc aacggtgccc ttaatcgaag aaaactcgtg
     1081 ctctacgcct tcgatcttta cggccgtaat cgcggagcct tcgattgaag aaagcagcgc
     1141 gcggcgcagc gaattgccga ccgtcgtgcc gaacccgcgc tcaaacggct gcgccgaaaa
     1201 ccggccgtaa cgttccgtca gcgtgtcgcc gtctgccgcc aaacgtcgcg gcatctgaaa
     1261 acctgtccaa agattatttt gatccataac ttaccgtcag atgtctgagg agaagcgaag
     1321 cggccgcgcg aatcgcgtga ccgctcgcgc gttaactact tgctataaag ctccacaatc
     1381 agttgctcgt tgatcgagcg atcgatgtcg tcgcgtgtcg gcaggccggt caccgtcgcc
     1441 gccatttcgc cgccgccggc ggaaacccac gaggggcgac cacgacctgc ggccgtttgc
     1501 cacgcgcctt cgacgtgcgg gttcttgcgg ctcgcgtcct ttatcgtcag cgaatcgccg
     1561 ggcttcacct gatacgaagg aatgtccacc ttgcggtcgt tgaccagcac gtgcccgtgg
     1621 ttcacgagct gccgcgcctg acgtctcgaa gtcgaaaaac cggcgcgata tattgcgttg
     1681 tccagacgtc gctcgagcaa gaacaagaga ttctcgccgg tgatgccttt ctgccgcgcc
     1741 gctcgctcga aataattacg aaattgtcct tcgaggatga aatagatgcg cttgaccttc
     1801 tgcttttcgc gcagctgctg gccgtaaccc gccagagctt tgccgcgtcg catggaattg
     1861 ccgtgttgtc cggggggctg agtgccccgc ttttcaatcg gacaagatgg tttgtagcaa
     1921 cggtcgccct tgaggaaaag ttttgcgcct tcgcggcggc acaagcggca caccgcatct
     1981 cgatacctag ccaatcgttt ctgcctccag tctacgaatt acttagacgg aaaagtttac
     2041 aggtcgcatc ttttgaatct tgaatctgaa atcttgaatt ccagatcgcg cgacccttca
     2101 tcctttaggt caatcaacta ctgtgacgag tgacgagtga cgagtgtcaa gaagcttttg
     2161 cttgtcactc gtcacttgtc actcattcac tgccttctta aactctccgc cgcttcggcg
     2221 gtctacatcc gttatgcgga atcggcgtag tgtcccgaat cgccatcacg cggatgcccg
     2281 cgttgttgat agcgcgaatc gcggactcgc gaccgccgcc cggccctttg acgcggactt
     2341 cgcactgcga catgccggat tccatcgcct ttttggccgc ttcataagcc gcttgctgcg
     2401 ctgcgaatgg ggttcccttg cgcgaaccac gaaagccgcg cgcgcccgaa gacgactggg
     2461 caatcaagtt cccttcgaga tcggtaatcg agatcatcgt attgttgaac gaagccgcga
     2521 tatagacgat cccggatgga atgtgcttct tctctttctt gcgaaagact ttctttttgc
     2581 cacctgctga tgcttttgcc attacttctt acccggtgcc ttcttcttgg cgacggttgc
     2641 gcgtcgcggg cctttgcgcg tgcgcgcgtt cgtgtgcgtg cgttgtccgc gaacgggcag
     2701 gccccggcga tgccgcagac cacgataagc gccgatgtcc atcaaacgct tgatgtccat
     2761 ctggatgcgc ttgcggaggt cgccttcgat ttcgccctgg gcttccagga tcgcgcggat
     2821 gcgactgagc tcttcttcgc tcaagtcacg gacgcgcgtc tcgagactga tttgcgcctc
     2881 gttcagaatc gacgctgagc gcgatcggcc aataccgtaa atataagtaa gaccgatctc
     2941 ggcgcgctta ttcggcggaa gatctacacc tgctacacga gccatgctgg taatttagga
     3001 ttgcgaatct cggaatgcgg acttaaccac gttgacgaat gcgcgctcca ctcactccta
     3061 tttctgtctc tgcttgtgct ttggattggt gcaaatcacc cgtaccacgc ccttgcggtg
     3121 gatgactttg cacttatcac aaatttttct gacggaagct cgaactttca ttttaactgc
     3181 cgatcatttg tagcgacacg taatgcgccc ccgattaaga tcggggcgca attccccttt
     3241 attggcaaac ttcggatagt agcatgccgc tcaagcaatt gccaagccgc gacgctgttt
     3301 taagccgcta cagtctgcga gtcggcgttg acctcttctt taaccagcgt aaggacttcc
     3361 gggccttctt cggtgatggc aatcgtgtgt tcgacgtgcg cgctggggcg cccatcaacc
     3421 gtcacgacgg tccagccatc cgctaaagtt ttcgtgtgct gcgatccgat attgatcatc
     3481 ggctcgaccg cgaacacata gcccttctta atcttcggtc cctttccggg cttgccgtag
     3541 ttcggaatct gcggatcttc gtgcatctgc cggccaatcc cgtggccaac atactcgcga
     3601 acgacggaat atccatgcga ctcagcgtgc tgctgaacga cgtatccgat atcaccgatg
     3661 tgatttccgg cccggcaatg atcgatcgcc aattgcaacg actcttcggt gacgcgtatc
     3721 agtttcaaga ggtcatcgcc aacccggccg accggaaccg tggtcgcggt gtcaccaaca
     3781 aacccgtcga gcgtcgcacc cacatcgatg gaaaagatgt cgccttcctt caattcatac
     3841 tttgacggga agccgtgcac tacctgctcg ttgaccgacg cgcaaatcga atagggaaaa
     3901 ccattgtagc ctttgaaggt cgggtaagcg ccggcgtcgc gaatcatctg gtcggcagca
     3961 tcgttgattt cgatcgtggt aacacccggc gccgccattc tgcggagttc gcgcagcacc
     4021 cgcccgacaa gctgcccgga cgcgcgcatc ttttcgatct ctttttgcga cttgccgatg
     4081 atcattcgaa gtgtctctta cgctttaatc acgcgttcga tctgcgagta gatttccgcg
     4141 ggcggcctcg tgccgtctat tctttccaac cggccactgt ggtcgtagta atccagcagc
     4201 ggcgctgtct gtcgttcgta ggtgtcaagc cgcacgcgaa tcttttccgg cgcgtcgtca
     4261 gcgcgaaacg tcagttcctg ttccggatgc agatcgcatc gattgtcgaa gcgcggcggc
     4321 ttaaagtaga tgttgtaaat ctcgccgcag atcggacacg tgcgccggcc cgtaagtcgc
     4381 tgctgcaaaa cgtcgtacgg cacatccacg aaaattccct ggattgagct tccctgttcg
     4441 tgtgcgagct tctcgagcat ctccgcctgc accgtggtgc gcggaaaacc gtcgagcaca
     4501 tagccgtttt tgcaatcttc gccggctgtc cgcttccgta ccatctcgat tacaacgtca
     4561 tctgaaatca atcgtccgga tgcctgcgtc gaatggatgt cctcggcggc catggctcgc
     4621 agcatgtcgc cggtcgaaat ctgcgggaga ttcatccgct cttgcagcaa gcgcgcctgt
     4681 gtgcctttgc cggcaccggg cgcgcccatt aagacgatga tctttgacat tgagttaggt
     4741 tatgccctgc gaccgcgcaa tcttcctccg ctgcccagga aaccttcgta gttacgcatc
     4801 accaattgcg cttcaatctg cgcgacggtg tccatagcga cgccgacaag aatcagcaac
     4861 gacgtgccgc cgaagtaaaa ctgataaccc atgccggtcg gtatccagcc caggcctggc
     4921 gtggtgctga cgaaggcgtc gagccatggg ccgatgaacg gcaaacgtcc gacgcgatat
     4981 ccactcaaca tgaactgcgg caggaaagcc acggcggcaa gataaatggc gcccacaaaa
     5041 gtcaaccgcg tcaaaattgt gttcaggtat tcggccgtgg cgcggccggg acgaatgccc
     5101 ggcatgaagc cgccgtgttt gcgcaggttg tcagccactt cctcaacatt aaaaacgatc
     5161 gaaacgtaaa agaaggtgaa caagataatc agcgacagga aaattagttc gtaatacgga
     5221 tcgcccgcat gaaacacctg aaagaaggcg aagattttgc cgtaccagtt gccgggatta
     5281 cttggcggca aagccgagaa cagactctgc ggcatcgaca gcacggacga ggcgaagatc
     5341 accggaataa cgccccccat gttgagcttc aacggcatcg tcgtttgctg gccacccacc
     5401 atttgccggc cgacgtggcg cttcgcatag ctaacgggga tttttcttcg cgctgattcg
     5461 acgaaaacga taaaggcaat aaccaaaacg atcgccgcga ccatcacaat tacgccgagg
     5521 atttccagcg tgtcgccgct gctgacgcga cccatcactt gctggacgcc attcggtaaa
     5581 ccaatcacga tacccgaaaa gatcagcagg gaaatcccat tgccgacgcc gcgttctgta
     5641 atttgctcgc cgagccacat cacgaagatg gtgccggtcg tcagcgtcag caccgtcgtg
     5701 agcataaagc tccacgtcgg cgcgccgacg ccattgattt gcagccagtg cgctacgaac
     5761 gaagtctgta acgccccaag accgaccgtc agatatcgcg tccactgatt gatcttctgc
     5821 cggcccatct cgccttcttc ctgcagcttc ttcaactgcg gagagacgac cgtcattaac
     5881 tggagaatga ttgacgcagt aatgtaaggc gttacgccaa gagcaaaaat tgaaatgacg
     5941 cggaagttgc cacccgagaa aagatccagc acacccagca acgtgccgct cacgtcctgc
     6001 cagacttgat cgagacgttc tcggttaatg ccgggcgtcg agatgtgcgc gcccaggcga
     6061 tagatcgcca acaagcccaa agtgaaaaag atccgcttgc gcagatccgg cacactgaac
     6121 atattgcgaa cggcggctag gaatttttcc ataagaaaaa cg
//
LOCUS       DATDBY010000144         3608 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2546180, whole genome shotgun sequence.
ACCESSION   DATDBY010000144 DATDBY010000000
VERSION     DATDBY010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3608
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2546180"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1454)
                     /gene="sdhA"
                     /locus_tag="VIT19_02845"
     CDS             complement(<1..1454)
                     /gene="sdhA"
                     /locus_tag="VIT19_02845"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase (quinone) flavoprotein
                     subunit"
                     /protein_id="HEY5837945.1"
                     /translation="MATQINIAVVGGGLAGLAAAMKIAEAGHNVELFSVVPVKRSHSV
                     CAQGGINGAVNTKGEGDSTWEHFDDTVYGGDFLANQPPAKAMCEMGPAVIYLFDRMGV
                     PFSRTNEGLLDFRRFGGTKHHRTAFAGASTGQQLLYALDEQVRRFEVAGKVKKYEGWE
                     MMSLVLDDHQVCRGLVAMNLRSLELKAFPADAVIIATGGPGLIFGKSTNSMVCTGSAV
                     AACYQQGAKYANGEFIQVHPTSIPGEDKLRLMSESARGEGGRVWVPRSNGDNRSPSSI
                     PEKERRYFLEEKYPAYGNLVPRDIATREIFQECLDGNGVNGENQVYLDVTHIPAETLE
                     RKLGAILEIYEMFVGDDPKHVPMRIFPGVHYSMGGLWVDFDQRTNIPGLLAAGECDYS
                     IHGANRLGANSLLSCVFGGFIAAPAAIEWAKNVERNGTNGSRIYEQETQRQQEMNDGL
                     IKQSGKENQYKLHEEMGESMTDNVTVIRYNDRLKA"
     gene            complement(1470..2141)
                     /locus_tag="VIT19_02850"
     CDS             complement(1470..2141)
                     /locus_tag="VIT19_02850"
                     /inference="COORDINATES: protein motif:HMM:TIGR02046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837946.1"
                     /translation="MAIRLSRTFVLRKLHQLSGIMPLGFFLLEHFYTNSKAIAGAASV
                     NKAVEDLQAIPYILLVEIFGIFIPLIYHAVYGLVITAEARPNNLAYPYPRNWFYTVQR
                     VTGVILFFFILFHVLNFRFGMIPGLNTVSVAHHPEQSFEIVSREFRMIPIFIVYMVGI
                     TATVWHFANGIWLFLVDWGITIGERAQRLAGYACIGFGVVLLFVGINAAIAFIRPGGL
                     LRGIL"
     gene            2350..2643
                     /locus_tag="VIT19_02855"
     CDS             2350..2643
                     /locus_tag="VIT19_02855"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEY5837947.1"
                     /translation="MSEEDYNPFPEPVVIEITDVFDLHTIPPRQVKAVVEEYLREAHA
                     KGFRVVRIIHGKGRGVQREIVRTILERTPFVNDWTDAPPDAGGLGATIVRLKD"
     gene            2681..2917
                     /locus_tag="VIT19_02860"
     CDS             2681..2917
                     /locus_tag="VIT19_02860"
                     /inference="COORDINATES: protein motif:HMM:TIGR02574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module protein"
                     /protein_id="HEY5837948.1"
                     /translation="MASNLKDVFQAAAQLPENDRAALAGLLIETLDPATEPEVEAAWS
                     EEIRRRLAEIDGGTVELIPWEEVRAELLAQPNEG"
     gene            2907..3197
                     /locus_tag="VIT19_02865"
     CDS             2907..3197
                     /locus_tag="VIT19_02865"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEY5837949.1"
                     /translation="MKVRLHPEARAELIKARNWYHNRSPLSSVAFSHAVDRAISLISE
                     SPNSFPVADHGTRKLVLRRFPFNVFYRISEVEIVVIAVAHQKRRPGYWSDRG"
     gene            complement(3299..>3608)
                     /locus_tag="VIT19_02870"
     CDS             complement(3299..>3608)
                     /locus_tag="VIT19_02870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837950.1"
                     /translation="YLFLPRAGRFILSEEFTELSQTGRLGELERDPRRKRLRTFSKSG
                     CCLHMTEEFVVVNNRPKKVLEIVEDATIADEKRVKVTTKRLVGGRWRTITKYVPRVSQ
                     "
BASE COUNT          848 a         1027 c          961 g          772 t
ORIGIN      
        1 gctttcagac gatcgttgta gcgaatgacc gtgacgttgt cggtcatcga ctcgcccatc
       61 tcttcatgca gcttatactg attctctttc ccgctttgct tgatgagccc gtcgttcatt
      121 tcctgctgac gctgagtctc ctgttcgtaa atgcgcgagc cgttcgtccc gttgcgctca
      181 acattcttcg cccattcaat cgcggccggc gcggcaatga aaccgccaaa gacgcaactg
      241 agtaatgaat tggctcccaa tcgatttgcc ccatggatcg aatagtcgca ttcacccgcg
      301 gccagcaatc cgggaatgtt cgtgcgctga tcgaaatcga cccagagccc gcccattgaa
      361 tagtgcacgc ccggaaagat ccgcatcggc acatgcttcg gatcgtcacc gacgaacatc
      421 tcgtagattt caaggatcgc gccgagcttt cgttccaaag tctcagccgg aatgtgcgtg
      481 acgtcgaggt aaacctggtt ctcgccatta acaccgttgc catcgaggca ttcctgaaag
      541 atttcgcgcg tggcgatgtc gcgcggcaca agattgccgt aagccggata cttctcttcg
      601 agaaagtacc ggcgctcttt ttcaggaatc gacgatggcg agcgattgtc gccgttgctc
      661 cgcggcaccc agacgcgacc gccttcgccg cgcgccgatt cgctcatcag acgcagcttg
      721 tcttcgccgg ggatcgaggt gggatgcact tgaatgaatt cgccgttcgc gtacttcgcg
      781 ccctgctgat agcaagccgc gacggcgctg ccggtgcaga ccattgaatt cgttgacttg
      841 ccgaagataa gtcctggtcc gccggtggcg atgatgacgg cgtccgcggg aaatgctttc
      901 agctcgagcg accgaagatt catcgcgacc agtccgcgac aaacctgatg atcgtcgagt
      961 accagcgaca tcatctccca gccttcgtac ttctttactt tgccggcgac ttcgaagcga
     1021 cgcacctgtt cgtcgagcgc gtagagaagc tgctgtcccg tcgaagctcc cgcgaaagct
     1081 gtccggtgat gcttcgtgcc gccgaagcgg cgaaaatcca acaggccttc gttcgtgcgc
     1141 gagaacggca cgcccatccg atcgaacagg taaatgaccg ccggccccat ttcacacatc
     1201 gcttttgccg gcggctggtt ggcgagaaag tcacccccat aaactgtgtc gtcgaagtgt
     1261 tcccacgtcg agtcgccttc gcctttggtg ttgaccgcgc cattgatgcc gccctgcgcg
     1321 cagacggagt gcgaacgctt taccggcacg actgaaaaca actcaacgtt gtgcccggct
     1381 tcggcgatct tcattgccgc cgccaaaccc gccaagccgc ccccgacaac tgcaatattg
     1441 atttgagtag ccatctttcg ttttgaccgc tacaagattc cacgcagcaa tccgcctggc
     1501 cggatgaatg cgatcgcggc gttaatgccg acgaaaagca ggacaactcc aaagccgata
     1561 caggcgtaac cggccagacg ctgcgcccgc tcaccgatgg taattcccca atcgacgagg
     1621 aacagccaaa tgccattcgc gaaatgccag actgtcgcag tgattccgac catgtaaacg
     1681 atgaagattg gaatcatgcg gaactcgcgc gaaacaatct caaacgactg ctcgggatga
     1741 tgcgccaccg aaactgtgtt cagacccgga atcattccaa atctaaagtt caaaacatga
     1801 aataagataa agaagaacag aatgacgccg gtgacgcgct ggacggtgta aaaccagttg
     1861 cgcggatatg gatacgcgag attgttcggt cgtgcttcgg cagtgataac caaaccgtac
     1921 accgcgtgat aaatcaacgg aatgaagatg ccaaagatct cgacgagcaa aatgtacgga
     1981 atcgcctgga gatcttcgac cgctttattg acactggcgg cgccggcgat cgctttggaa
     2041 ttcgtataga agtgctccag cagaaagaag cccagcggca tgatgccgct caactgatgg
     2101 agctttcgca agacgaaagt ccggctcaga cgaatcgcca aaggagatct ccttttcgga
     2161 tttgctcaat caaggtcagc gaactcagcg ggaatttgat agcttgcaat agcaaggaaa
     2221 attatagagc ggcgacgcgc aaaagcaaaa cgccactgat gtactttgta ctttgagctt
     2281 tgtactttga cgttctataa ggctgggtga gacatcaaag tacagagcac caagtacaaa
     2341 gcaccgaccg tgtctgaaga agattacaac ccattccccg aacccgtcgt gatcgagatc
     2401 accgacgtct tcgatctgca cacgattccg ccacgacagg tgaaagcagt tgttgaagaa
     2461 tacctgcgcg aagctcacgc gaaaggtttt cgcgtcgtcc gcatcattca cggtaaagga
     2521 cggggcgtcc agcgcgagat tgtacgaacg atattagaaa gaaccccgtt tgttaacgac
     2581 tggaccgatg cgccaccgga cgctggagga ctgggcgcga ctattgtgag gttgaaggat
     2641 tgattcacaa tgagccattt ttcggagtac actctgcgac atggcaagca atctcaaaga
     2701 tgtttttcag gcggccgccc agttgcccga aaacgatcgc gcggcgttgg caggtttact
     2761 gattgagacg ctggatccgg caaccgagcc cgaggtcgaa gcggcgtggt cagaggaaat
     2821 caggcgacgg cttgccgaaa tcgacggggg aacggtcgaa ctgattccct gggaagaggt
     2881 acgcgcagaa ctcctcgctc aacctaatga aggttaggct tcaccctgag gctcgcgcag
     2941 aactcatcaa agcgcgcaac tggtatcaca atcgaagccc tcttagctca gtagctttct
     3001 cgcacgccgt tgaccgtgcg atttccctaa tcagcgaatc gccaaacagc tttcccgtcg
     3061 cggatcacgg cacgcgcaaa ctagtcctgc ggcgatttcc tttcaacgtc ttctaccgaa
     3121 tcagcgaggt tgaaatcgta gtcatcgctg tggcgcatca gaagcggcga cccggctatt
     3181 ggtcggaccg cggttaaaaa gtggcgccct gtatctacga cgagatggtt tttctcaaaa
     3241 accgaatttg ttttggattg gacggacgcg cagccggaag cgggagcatt gggcgccact
     3301 attgcgagac tcgcggaacg tacttagtta ttgttctcca acgtccgccc accagccgtt
     3361 tggttgtaac cttcacccgc ttctcgtctg cgattgtggc gtcttcgacg atctccagga
     3421 ccttcttcgg ccggttgtta acgacaacaa actcctcagt catgtgaaga caacatcctg
     3481 atttgctgaa agtgcgcaga cgctttctcc gcgggtcgcg ttcgagctcc ccgagacgcc
     3541 ctgtctgcga aagctcggta aactcctcac tcaggatgaa ccggcctgcg cgcggcagga
     3601 acagatag
//
LOCUS       DATDBY010000145         2184 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_502011, whole genome shotgun sequence.
ACCESSION   DATDBY010000145 DATDBY010000000
VERSION     DATDBY010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2184
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_502011"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..378
                     /locus_tag="VIT19_02875"
     CDS             <1..378
                     /locus_tag="VIT19_02875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837951.1"
                     /translation="KCTNCHDGVLFTDFQYHNVGIGMDQKEPDVGRFKVTNNAKDTGA
                     FKTPTLRDIARTAPYFHDGSAATLEEAVDIMLGGGKPNQYLDKVNLQPHKLVGGQRED
                     LLAFLRSLNVVNCTLKKPPLPQQ"
     gene            complement(627..1256)
                     /locus_tag="VIT19_02880"
     CDS             complement(627..1256)
                     /locus_tag="VIT19_02880"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF014796.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEY5837952.1"
                     /translation="MSTTYKPQQFDLSNLKGISDETIDMHFKLYEGYVKETNKLNERI
                     AEFIKDAKVDQEEFAEYSELTRRLGFEYNGMVLHEYYFENLTSGGGTGDPTGKTGFRQ
                     AAEESFGSYDIWKANFVSTGKMRGVGWAICYEDPSNGRLSNHWITLHEVGNVAGFNPI
                     LVMDVWEHAFILDYKPADRPKYIEAFFSNIDWSAVEGRLHRLTAHPVAA"
     gene            complement(1473..>2184)
                     /locus_tag="VIT19_02885"
     CDS             complement(1473..>2184)
                     /locus_tag="VIT19_02885"
                     /inference="COORDINATES: protein motif:HMM:NF017945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HEY5837953.1"
                     /translation="RISFRWFHFLAGITWIGLLYFFNLVNVPLQKKLDPDTKKKVNPD
                     LLLPALWFFRWGAVITVFFGLAYFAMYILKTDVNNANNLGGQQANVWKILLFWLGYPI
                     VLFLIQFLIIKKVPALTKDGRVFAIVMIILTAVFTYGLLRFFPAMLSPEWTSNKTLSI
                     GVGGAYGILMMLNVWGIIWPANKRIIGGLQGGPPAAPELARQAFIASRTNAWLSLPML
                     LLMATSHGDWLIFSGRLG"
BASE COUNT          499 a          614 c          589 g          482 t
ORIGIN      
        1 aagtgcacca actgccacga cggcgttttg ttcactgact ttcagtatca caacgtcggc
       61 atcggcatgg atcaaaaaga gcccgacgtc ggtcgcttta aagtcacgaa taatgcgaaa
      121 gacaccggag ctttcaagac gccaacgctg cgcgacattg cgcgtacggc gccgtatttt
      181 catgacggca gtgcagcgac actggaagaa gcggtggaca tcatgctcgg cggcggcaaa
      241 ccgaatcagt atctcgataa ggtgaacctg caaccgcaca agcttgtggg tggccagcgc
      301 gaagacctgc tcgcttttct gagatcgctg aacgtggtga actgcactct caagaaaccg
      361 ccattgcccc agcaataatt tggagtgcgc cggcgcttta aggcagcccg aagggctgcg
      421 agagagtagc cggtggtccg cagaccaccg gacacagtgg aattgattgt ctgcaccctg
      481 aaagggtgcg agatatttgt tgcacccctt cagggtgcga atcgattaaa tcggtaaccg
      541 ggggtctccg cttcgctcga cccccggcta ctatctgtca atccttcggg ttgatcgatc
      601 tctcgcaacg gatcttttga cgtcaactac gccgcgactg ggtgcgctgt cagccggtgc
      661 agtcttcctt cgactgcgct ccaatcaata ttcgagaaga acgcttcgat gtacttcggc
      721 cgatccgcag gtttgtaatc aagaatgaag gcgtgctccc acacgtccat cacgagaatc
      781 ggattgaagc ccgccacgtt tcccacctca tgcagcgtga tccagtggtt cgatagcctg
      841 ccgttcgaag gatcttcgta acagatggcc cagccgacgc cgcgcatctt gccggtgctg
      901 acgaagttgg ctttccaaat gtcgtagctg ccgaaagatt cttccgctgc ctgccggaac
      961 cccgtcttgc cggttgggtc gccggtgccg ccgccgcttg tcagattctc gaaatagtat
     1021 tcgtgcagca ccatgccgtt atattcaaag ccgagacggc gtgtcagttc cgagtattcg
     1081 gcgaactctt cctgatcgac tttggcgtcc ttgatgaact cggcgattct ttcgttcagc
     1141 ttgttcgttt ctttgacgta gccctcataa agcttgaaat gcatgtcgat cgtttcgtct
     1201 gaaatgccct tcaagttgct gagatcaaac tgttgcggct tgtaagtcgt agacatatct
     1261 tcctccggtg cgcgatacgc acgcctcccg gcgtgctgca cgcgagacgc gtgcgtacca
     1321 atttagctga atatgcggcg gaaatgtctc aaaggcatgg agaggtttca ctaatcctgt
     1381 tacataaaaa agaagggcac gacgtgatgc cgtgcccttt gttggtacgc acgcctccgg
     1441 cgtgcccagc aggccagagg cctgcgtacc gtttacccaa gcctgccgct gaagattagc
     1501 caatccccat gtgaagtggc catcaaaagc aacattggca gcgatagcca cgcgttggtc
     1561 cgcgaagcga tgaacgcctg gcgtgccagt tcaggcgcgg cgggtggtcc gccttgcaag
     1621 ccgccaataa ttcgcttgtt agccggccaa atgattcccc acacgttcag catcatcaga
     1681 ataccgtaag cgccgccgac gccgatcgaa agggtcttgt tgctcgtcca ttcgggcgat
     1741 agcattgccg gaaagaacct cagcagcccg tacgtgaaca cggccgtcag aataatcatg
     1801 acgatcgcga acacgcgtcc gtcttttgtg agcgccggaa cctttttgat gatcaggaac
     1861 tggatcaaga aaaggacgat cggatagccc agccagaaca gcaggatctt ccaaacattc
     1921 gcctgctggc cgcccaggtt gttcgcgtta tttacgtcgg tcttgagaat gtacatcgcg
     1981 aagtatgcga gaccgaagaa caccgtaatc accgcgcccc aacggaagaa ccaaagcgcc
     2041 ggcagcagca aatccggatt cacttttttc tttgtgtccg gatccagctt cttttgcagc
     2101 ggcacgttga cgaggttgaa gaagtaaagc aggccaatcc aggtaatgcc cgccaggaag
     2161 tggaaccagc gaaacgaaat gcgc
//
LOCUS       DATDBY010000146         3958 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1530332, whole genome shotgun sequence.
ACCESSION   DATDBY010000146 DATDBY010000000
VERSION     DATDBY010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3958
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1530332"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(166..447)
                     /locus_tag="VIT19_02890"
     CDS             complement(166..447)
                     /locus_tag="VIT19_02890"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEY5837954.1"
                     /translation="MENRKAHRVVFDRGYAANMMAIDGTWRRPCTMEDVSDTGARLTI
                     DGSIEGLNLKECFLLLSTMGKAYRRCQLAWVNGDQVGVHFLKPGTNKKP"
     gene            822..1007
                     /locus_tag="VIT19_02895"
     CDS             822..1007
                     /locus_tag="VIT19_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837955.1"
                     /translation="MAKAKVSFRIVRIADDDWSIQADYPDSEQRTISGLTSKEDANEW
                     INGERKIAWLRSQGYAK"
     gene            complement(1124..1321)
                     /locus_tag="VIT19_02900"
     CDS             complement(1124..1321)
                     /locus_tag="VIT19_02900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837956.1"
                     /translation="MVIWSAVTLTASEPFRVLSPVEPPAPADAAYRDYAGRVQNDIPD
                     ACRRSIGPDTGLTPEGLLRGE"
     gene            complement(1356..1748)
                     /locus_tag="VIT19_02905"
     CDS             complement(1356..1748)
                     /locus_tag="VIT19_02905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837957.1"
                     /translation="MSPAVAHDKRGGEDDSWIYAYDVRNIGAECGVDYARCAPHAANV
                     KSRCAVGSLFATGCLWAQSGHSPVPVRLSCADRSDHHLRHTIEIKPVIGSSRSKGLRN
                     YAVKYRLTYRDISVQSVYLRRGVVAITN"
     gene            1850..2419
                     /locus_tag="VIT19_02910"
                     /pseudo
     CDS             1850..2419
                     /locus_tag="VIT19_02910"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
     gene            complement(2514..3509)
                     /locus_tag="VIT19_02915"
     CDS             complement(2514..3509)
                     /locus_tag="VIT19_02915"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY5837958.1"
                     /translation="MPAPFVFTRRQLMAAGAATAAVASAGPGFANTAWPAKPIKMLVG
                     FAAGGQTDLFARTYGDYISRQVGQTVVVENKVGGGGAVSAVELKRSAPDGYTAMINNT
                     TTYMTNPVTMKDIRYDVGKDFLIVSIMPTGSLPLIVSEKCGAKNLEEFIAYARKTEKV
                     NIGTYAAGSYAHIAIAELNKQYGLKMVAVHYRGEAPMWTDLAGQTLDGGIGSYTAALG
                     VLQTGRGRAIAVSRRRISVLPDVATFHEQGATSRAFGLTTFQACAVPAATPAEIVQKL
                     SDLFVAAGKTDAIREMLKNQAIDEAPMTLEASQTLYRTEAPIWAELIAGLGLEPM"
BASE COUNT          793 a         1156 c         1161 g          848 t
ORIGIN      
        1 gaccgcatct ttaatgtcac ggtgctccgc caactgaatt acttggaatg gcgttttctg
       61 gcgctcaaat accgcccgat tctgatacgc ttgttcgaat tctgccatcg cgagcctcaa
      121 tatgatgcct gtagctcaac gaccggcctg ctaaaagcaa cggccctagg gtttcttgtt
      181 ggtccctggc tttaggaaat ggacgccgac ctgatcgccg ttaacccagg ctagttggca
      241 gcgccgatat gctttgccca tggttgaaag cagaaggaaa cattccttca ggttcaaacc
      301 ctcgatcgag ccgtcgatgg tcagtctggc gcccgtatcc gacacatctt ccatggtgca
      361 gggacgtcgc caggtgccgt caatcgccat catgttagcg gcatagcccc gatcaaacac
      421 gacacgatgt gccttgcgat tttccatctt cggcaattgt cacaataaga aaaaggcgaa
      481 gaggaaaccc gccgggtctg cgacgggttt ccctacgcaa cactctcgcg tcattccttg
      541 ggggataaga ccgcgataag caaaccttac gcgcgagtgg ttaatatttg tgcgcggtta
      601 ttgacaacgg agcagcgaaa gcccgctcgc ccggcggggt tttcgctttc taagaaacga
      661 ggtctccgca cgatttgggc tctcaatcag gaaccggact tcctgaaaat aatggaacgt
      721 taggaagcta agcattcatc tctattccgc ttcggctggc gtttgcccaa cgctctgacg
      781 tctgtgcttt cgttttctat caaacggatg cacaatgtct tatggcaaaa gcaaaagtta
      841 gcttcaggat cgttcgaatc gcagacgatg attggagtat ccaggccgac tatccagaca
      901 gcgaacaacg aacaatctcg ggtctgacca gtaaggaaga cgcgaacgag tggataaatg
      961 gcgagcgaaa gatcgcttgg ctccgctcgc aggggtacgc caagtgaatc gataggtttt
     1021 aggtgactga ggctttgatt gtgattgttt tcatagatcc gattgcttac cgactaattc
     1081 tagcgccgac gctgggtaga tctgcaccaa gcctttgtgc acctcactct ccacgcaata
     1141 agccctcagg tgtgagccct gtgtccggcc cgatggatct ccggcaagcg tcagggatgt
     1201 cgttttgcac gcggccggcg tagtcgcggt aggcggcatc tgctggtgcg ggtggttcaa
     1261 ctggcgaaag aacgcgaaat ggctcgctgg ccgtcagcgt cacggcactc cagatgacca
     1321 cgggtactct gctcgcactg gtgataatct ggatgttagt tcgtgatcgc caccacacct
     1381 cgacgtaaat aaaccgattg aaccgaaata tctcgataag ttaagcggta tttgaccgca
     1441 tagttgcgca ggcctttaga tcgactcgag ccaatcaccg gtttgatttc gatcgtgtgt
     1501 cttaagtgat gatctgatct gtcagcgcag gacaaacgca caggtactgg cgaatgtccg
     1561 ctttgcgccc acaagcagcc agtcgcaaac agagatccga cggcgcaacg tgacttcaca
     1621 tttgcagcgt gcggcgcgca gcgggcgtag tcgacgccgc attcggcgcc gatattgcgg
     1681 acgtcgtacg cgtagatcca ggagtcgtcc tcgccgccgc gcttgtcgtg ggcaacggct
     1741 gggctcactc gctcgtcgag tctcgagcag cgccttctgc gcagcagtgt ccctggcccg
     1801 caagtgatcg aaggcgaacg cttgtcatcg aggtcatcct tccgttcccg caagaacgct
     1861 ggccagcttc atcgcctacg ccggggccaa cccgggcaaa ctcagaatcg gctttgccgg
     1921 tgtgggcacg ccccagcaca tcggaatcga aatgttcaag gcgatggcgg atgtcgatat
     1981 gaccctggtc ccgtacctcg gcctcggctc aacccctgcg cttgcccacc tccttgccgg
     2041 aaaaatcgac gccatgttcg atccgatgcc gtcgtccatc gcgcctatca gggctgaacg
     2101 gttgatcccg ctggcggtga cgactcccgc aaagtccgac gcattaccaa atgtcccgtc
     2161 ggcatcagat ctggttgcag ggtaccaggc ggggtcgtgg ttcggtatcg tcgcgcccca
     2221 tcaaacgccc gctgctttgg tcgagagact caatgtagtc gtcaacgcag cgttcaggga
     2281 tccgggaatg aaagcgagac tggcggaact tcgcgcatcg ttgctgccgg gatcagtaac
     2341 gcaattccac gcattcattc agagcgagac ggtcagatat gctgaggtga tccgctcagc
     2401 ggatatttcg gccaaatgat ttgctccgcc gtggacgctg gcgggacgct gtcaacaatt
     2461 gagcgaatcg agtgacggtc gccgcgccaa agccggacgg gcgaaagtcg cgcctacatc
     2521 ggctccagcc ccagccccgc gatcagctcg gcccagatcg gcgcttccgt ccggtaaagc
     2581 gtctggctgg cttccagtgt catcggggct tcgtcgatcg cctggttctt gagcatctcg
     2641 cggatcgcat cggtcttgcc ggcggcgacg aacaggtccg acagcttttg cacgatttcg
     2701 gccggcgttg cggcggggac ggcgcaggcc tggaacgtgg tgaggccaaa ggcgcgcgag
     2761 gttgcgccct gctcgtggaa ggtcgcgaca tcaggcaaca cgctgatgcg gcggcgggac
     2821 accgcgatcg cgcgtcccct gccggtttgc agcacgccga gcgcggcggt gtagctcccg
     2881 atcccgccgt cgagcgtctg ccccgcgaga tcggtccaca tcggcgcttc gccgcgatag
     2941 tgcacggcca ccatcttgag gccgtactgc ttgttgagtt cggcgatcgc gatatgcgcg
     3001 taggatccgg ccgcataggt gccgatgttc actttttcgg tcttccgcgc gtaggcgata
     3061 aattcctcaa gatttttcgc gccacacttt tcgctgacga tcagcggaag actgccggtc
     3121 ggcatgatgc tgacgatgag gaaatccttg ccgacgtcat agcggatgtc cttcatcgtc
     3181 accgggttgg tcatgtacgt cgtcgtgttg ttgatcatcg cggtgtagcc gtcgggcgcg
     3241 gaccgcttga gctccaccgc ggagacggcg ccgccgccgc cgaccttgtt ttcgaccacc
     3301 acggtctgtc caacctgccg cgaaatgtag tcaccatagg tgcgtgcgaa gagatcggtc
     3361 tggccgccgg ccgcgaagcc gacgagcatc ttgatcggtt tggccggcca tgccgtgttc
     3421 gcaaaccctg ggcccgcgga agccacggcc gccgtcgccg cgccggccgc catgagctgg
     3481 cggcgtgtga aaacgaacgg tgctggcatt ttcctctcca cttttttgtg aacgcattat
     3541 tggggctgca gcgtcacggc gcaagcgaat gtgggggatg ccggtcacag aatgagcgcg
     3601 cgtgcttcga ttactccgct caaatggtgg ggtggtcccc ttggcaagga gagcgcaaca
     3661 taaccaccga cgaatcttga ccccctcgag cggcgggttt tgacggtagc tgggccgacg
     3721 catacgtccg ttctgccctc agtaaggaca ttccagcgag cggctgcttt gcgccaatgg
     3781 cgagcattcc ggagcagatc ataatgacgt ctttcgtcat cgctggcctc ggtaaggttg
     3841 cgatgcagaa acgacgccaa agttgcatat ggccgcagcc taaaggcgcg ccagcgtgaa
     3901 ccggcgctga tacactccgg cacgaacctt gcgtttcaca aagcgttgaa ctttccag
//
LOCUS       DATDBY010000147         2887 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2546029, whole genome shotgun sequence.
ACCESSION   DATDBY010000147 DATDBY010000000
VERSION     DATDBY010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2887
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2546029"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VIT19_02920"
     CDS             <1..190
                     /locus_tag="VIT19_02920"
                     /inference="COORDINATES: protein motif:HMM:NF013219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HEY5837959.1"
                     /translation="LVRLSFGSDNRLVVPAAAIAGATFVIVADTLARTLIAPRELPVG
                     AITALIGAPLFVYLLKRG"
     gene            205..1035
                     /locus_tag="VIT19_02925"
     CDS             205..1035
                     /locus_tag="VIT19_02925"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5837960.1"
                     /translation="MGHIRRIGPIGPVGHMLEARNISINYDDRTAVRDVSLRAEPGNV
                     IAILGPNGAGKSTLLRALNGSIAPANGEVLLNGKPLRTFARRVVARQIGMVAQEADLR
                     FPVTVFEFVLGGRYAWSSAKAWGWENERDIEMAQNSIRETELADFESRLMNELSGGER
                     QRAVLARALATEARIFLLDEPTANLDLAHQATMLRLIKARCAKEESAAVVVTHDVNLA
                     AEFSNHVVLMKAGGVVSAGAPLEVLSEMLLGEVFGLRVLVDAHPISGAPRITPVHTQL
                     "
     gene            1110..>2887
                     /locus_tag="VIT19_02930"
     CDS             1110..>2887
                     /locus_tag="VIT19_02930"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5837961.1"
                     /translation="MKNVLLLIIAMAIGTMTALAQSGTELRGRVTDERDANIPGAEVR
                     LRSRAGGELSATTNDNGAYEFINVTPGEYVLEIRANGFAVSASRVTIQRGQTVTNDVR
                     LSIDSINETVSVTGTGIAQTVDETSKAISVLDNSAIETKREIGLSESLRGIPGVRVQQ
                     QGSPGALTSVRLRGQRTSDTALLLDGLRVRDASDINGAAGPLFADLAPTDLDRVEVLR
                     GSGSSIYGSNAIGGAINLVPAATRGDRHFEFGFDGGSLAQFRERVRGSGGIGKRAGFS
                     FGLSRVDVRHGVDGNDEYGNTAASGRFQFHPTRSSTLSVNFYGTTSNARINDSPFALP
                     AAFTSGQYPRAIEATTFHADLNNPDQGRRNRLGVTALRFADQVNNTFSYSVAYQHVGT
                     RRRNYNGTAIDPQFAAFYPFGDFAFVAVNNGSTDTFDARANFRLGRHNLVTAGFEYER
                     ESIFQSATPSFSAFNNTTDRQRTMAVFAQDQIFLLEDRLQISVAARGQWFRIRAADRP
                     GFLGSINPESSITGDGSIAYFIRSTGTKLRAHVGNGFRAPALFERFGAGTFAQAGFTR
                     FGDPTLRAEQSISVDGGFDQRVANDRA"
BASE COUNT          581 a          799 c          890 g          617 t
ORIGIN      
        1 tctcgtgcgg ctgtcgttcg ggagcgacaa ccgtctggtg gttccggctg cggcgattgc
       61 cggtgcgacg tttgtgattg tcgccgacac tttggcgcgc acgctcatcg cgccgcgtga
      121 attgccggtg ggcgcgatca cggcgctgat cggcgcgccc ttgtttgtct atttgttgaa
      181 gcggggatag gacgaatagg acttatggga catatacgtc gcatcggtcc catcggtccc
      241 gtaggccaca tgcttgaagc aaggaacatc tcgatcaatt acgacgaccg gaccgcggtg
      301 cgtgacgttt ccttgcgcgc cgaaccagga aacgtgatcg cgattctggg cccgaacggc
      361 gcaggcaaat caaccctgct gcgcgcgctg aacggcagca tcgcgccggc aaacggtgaa
      421 gttttgctta acggcaagcc tctgcgaacg tttgcgcggc gagtagtcgc gcgacaaata
      481 gggatggttg cccaggaagc ggatctgcga tttccggtga ccgtttttga gtttgtcctc
      541 ggcggccgct acgcatggtc gagcgccaaa gcatggggct gggaaaatga acgcgacatc
      601 gagatggcgc aaaactcaat tcgcgaaaca gaactcgcgg atttcgaatc tcggttgatg
      661 aacgagttgt cgggtggcga acgccagcgc gcggtactcg cgcgtgcgct cgcgactgaa
      721 gcgcgcatct ttctgcttga tgaaccgacg gcgaacctcg atctcgcgca tcaagcgacg
      781 atgctgcgtt tgattaaagc acgctgcgcc aaagaagagt ctgcggcggt ggtagtgacc
      841 cacgacgtca atctcgcagc tgaattctca aaccacgtgg ttcttatgaa agccggaggc
      901 gtcgtgtcgg cgggcgcgcc gctggaggtc ttgagcgaaa tgttgctcgg agaggttttt
      961 ggcttgcgag tgctggtgga cgcgcatccg atctcgggcg cgccgcgaat tacgccagtg
     1021 cacacgcaac tgtaaggatg aactctgggg cagtagcccg accgtgaggg agggcgctcg
     1081 ccataaagag aaagagtgag ggatgaagga tgaaaaacgt tttgcttctt attatcgcga
     1141 tggcgatcgg aacgatgact gcactcgcgc aaagcggcac tgaacttcgc ggacgcgtaa
     1201 ctgacgaacg tgacgcgaac attcccggtg cggaggtgcg tctccgatcg cgtgccggcg
     1261 gcgagttgtc agcgaccacg aacgacaacg gcgcctacga gttcatcaat gtcacgcccg
     1321 gagaatacgt tttggagatt cgagcgaacg gcttcgcagt gtctgcttca cgggtgacta
     1381 tccagcgtgg ccaaacagtg acgaatgacg tgcgcctttc gatcgattcg atcaatgaga
     1441 ccgtaagcgt gacgggcacc ggcatcgcac aaactgttga tgagacttca aaagcgatca
     1501 gcgtcctcga caactcggcg attgaaacga aacgtgagat tggattgagc gagagcctgc
     1561 gcggcattcc gggcgtacgc gtacaacaac aaggttcgcc cggcgcattg accagcgtgc
     1621 gtttgcgggg tcagcgaaca tccgacaccg cgctgttgct cgacggattg cgcgtgcggg
     1681 atgcttcaga catcaacggc gcggccggcc cgttgtttgc tgatctcgcg cccactgatt
     1741 tggatcgcgt tgaagtgctg cgcggctcgg gctcgtcaat ctacggctct aatgcgatcg
     1801 gcggtgcgat taatctcgtc ccggcggcga ctcgcggaga ccgtcatttt gaattcggtt
     1861 ttgatggcgg cagcctggcg cagtttcgtg aacgggtccg cggatcgggc ggcatcggca
     1921 agcgcgccgg cttcagtttt ggtttatcgc gcgtggatgt gcgccatggt gttgacggca
     1981 acgacgagta tggcaacacg gctgcctctg gccgatttca atttcatccg acgcggtctt
     2041 caacgctaag cgttaacttt tacggaacaa cttcgaacgc gcgcatcaat gacagcccat
     2101 ttgcgctccc ggcagccttt accagcggtc aatatccgcg cgcaattgaa gctacgacgt
     2161 tccacgctga tttgaacaat ccggaccaag gccgccggaa tcggctgggg gttacggcat
     2221 tacggttcgc tgatcaggtg aataacacct tctcgtattc ggttgcgtat caacacgttg
     2281 ggacgcggcg cagaaattac aatggcaccg cgatcgatcc gcagttcgcc gctttctacc
     2341 ccttcggtga tttcgctttc gtcgcggtaa acaatggctc gacggataca ttcgacgcgc
     2401 gcgctaattt cagattaggg cgtcacaacc tggtgaccgc cggattcgag tacgagcgcg
     2461 aatcgatctt tcaatctgcg accccttcgt tcagcgcttt caacaacaca accgatcgac
     2521 agcgcacgat ggcggtgttc gcacaggatc agattttcct tttggaagat cgattacaga
     2581 tttcggtcgc ggcccgcggc cagtggtttc ggattcgagc tgccgatcgt ccgggatttc
     2641 ttggctcgat caatccagag agttcaatta ccggcgacgg ctcgatcgct tactttattc
     2701 gttcgacggg cacgaaacta cgcgcgcacg tcggcaacgg gtttcgcgcg ccggcgttgt
     2761 ttgagcggtt tggcgccggc accttcgcgc aggcgggctt cacgcgtttc ggcgatccaa
     2821 ccttgcgcgc ggaacaatcg atcagcgtcg atggcggctt cgatcaacgc gttgccaacg
     2881 accgcgc
//
LOCUS       DATDBY010000148         5844 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1528614, whole genome shotgun sequence.
ACCESSION   DATDBY010000148 DATDBY010000000
VERSION     DATDBY010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5844
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1528614"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(586..2469)
                     /gene="mnmG"
                     /locus_tag="VIT19_02935"
     CDS             complement(586..2469)
                     /gene="mnmG"
                     /locus_tag="VIT19_02935"
                     /inference="COORDINATES: protein motif:HMM:TIGR00136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEY5837962.1"
                     /translation="MIFDEVFDVIVIGAGHAGCEAASSAARLGANTALLTLNLDLIGQ
                     MSCNPAIGGIGKGHLVREIDALGGIMARVIDRTGIQFRLLNRSRGPAVQAPRAQADRT
                     LYRVEMRRTLEATPNLSLRQGLVTDLLVVADRICGVELQDARRLGAKAVIVATGTFLN
                     GKIHTGRKTYAGGRTGEPASTELPAALRRLGFPVGRLKTGTPPRIDGRTIDWDAFEPQ
                     PPDERPVPFSFSTDEIEQEQLNCYLAYTNQELHEKIRANLHESPLYSGAIQGIGPRYC
                     PSIEDKVVKFPEKTRHQLFVEPEGFNTNEVYLNGLSTSLPAQLQQEIVNLIPGMDEAQ
                     IIRPGYAIEYDFVDPRELSPFLETARVKGLFLAGQINGTTGYEEAACQGLIAGINAGL
                     ATTGRPLFRVQREESYIGVLIDDLITQGVDEPYRMFTSRSEHRLALRHDNADVRLEPK
                     GRELGLVGDSEWERFNQRRDGLAKARELLSATKLRRTDPAYLDISRLTGQDLGDSITL
                     TQLALRPNVTREQIVELLPSSERANIRPREVETALADYLYAGYLDTHNQASRRLRQHD
                     AMSIPETLSFKAVGSLSHEMIERLERMRPRNFGDARKIPGLTPAALSNLLVYLTARQR
                     PSA"
     gene            complement(2505..3863)
                     /gene="mnmE"
                     /locus_tag="VIT19_02940"
     CDS             complement(2505..3863)
                     /gene="mnmE"
                     /locus_tag="VIT19_02940"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF003661.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEY5837963.1"
                     /translation="MALSTPPGRGGIGVIRVSGPASLSILRRMTHPELVDPEPNYLTL
                     RDVVDPFSREVLDHALVCYFKAPHSFTGDDVVEFHCHGSPVLLRRIIDSILQLDARLA
                     NPGEFSLRAVMNGRLQLSQAEAIRDLIDAQTDSAAQQATRQLAGEISHRLQPAKEQLL
                     KIIVRLESSLEFVEDDLPKLERHEIERALESLRADFQSLASTFARGQLLRDGLTVALV
                     GRPNAGKSSLFNRLLGHERAIVTPIPGTTRDTISEPIGLDGVPVTLVDTAGIRVTTEQ
                     IESIGVDRTRRVAADADLLIVVIDGSRRTNEEDEAVLEQAASKTHVIALNKSDLPSFS
                     NESVNDRLRANGSRTPTVAVSAATEDGLSDLHAAILKPFVNGNGTGEGLMITNARHHD
                     LLVRAMSSIASSEELIRGGASEEIVLIGLHNALRFIGELTGETTTEDMLGQIFSTFCI
                     GK"
     gene            complement(3911..4378)
                     /locus_tag="VIT19_02945"
     CDS             complement(3911..4378)
                     /locus_tag="VIT19_02945"
                     /inference="COORDINATES: protein motif:HMM:NF013583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="R3H domain-containing nucleic acid-binding
                     protein"
                     /protein_id="HEY5837964.1"
                     /translation="MQEICTKTEELANGILQGAGFDLRASAAESEQGCLLSIDGPDNG
                     LLLNQGGELLDALQQILNQAYGRDLPKGQRIVCDADNFRAAREAELRAMAQHAARQVR
                     SSSSAFVFGPMDSNERRVIHLTLAEESDLYTESIGEGNARRLRVTLKVAASSS"
     gene            complement(4462..5010)
                     /locus_tag="VIT19_02950"
     CDS             complement(4462..5010)
                     /locus_tag="VIT19_02950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837965.1"
                     /translation="MLKKYVFAAVLGLFFVISALPVAAQRPRTTADDPNQVVTPPPPA
                     PPTVRAKYEGGVFGYSKKKTGTLTIDSTNNRLVFSDGKGKEMFHIPFGSITGAYGDSH
                     YKQPAAATVASHIPFYGIPASFIKTKVRYLTIQYDDPDSKAAGVTSFRLDNKDLIDSV
                     LYTVATKAGLKKRGDIYVRKKE"
     gene            complement(5100..5594)
                     /locus_tag="VIT19_02955"
     CDS             complement(5100..5594)
                     /locus_tag="VIT19_02955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837966.1"
                     /translation="MKTSRARGSLALRFSIAIIALAFCSSAVRAASWQGLEPFKSRRG
                     EVLQALGEPLSDPFGGPLTFKILGGTASFSFVDANFVRTKKLRPELEGTVLQIILQHE
                     SSSDTPDSMSLLKNRDFTREEAKDALIFRNLKEGVVYTFLNGKLKTTRYTFSENQISR
                     ARGR"
     gene            complement(5616..>5844)
                     /locus_tag="VIT19_02960"
     CDS             complement(5616..>5844)
                     /locus_tag="VIT19_02960"
                     /inference="COORDINATES: protein motif:HMM:NF019339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5837967.1"
                     /translation="SHTQTKNYPKAILALERAAEKTPDDVNIYRMLGYDYEVSKQYGK
                     ALVAYERGLQLAPNDSDLKESAERVRPFAKT"
BASE COUNT         1267 a         1599 c         1663 g         1315 t
ORIGIN      
        1 gttttgccga ctccgccctt ctggttagca atggctagtg ttttacccat tcaaactgcc
       61 acccgccgac aaagataagg tgacacatta acacaaattg cccgccaatc cccgtcgcgt
      121 gcaaaagatg tggcacgtga aacagtcaaa aggggctggc gctgccaaaa atgtggcacg
      181 tgaaacagtc aaaagggacg gcaaagaggt gttattgtcg ggcgatgagc caaatcaccg
      241 actttgacgc gggttttatc tgcggcttgg tgacaggtga ggggtcgttt acgggcgacc
      301 gtaagcagcc cgttctggcg atcaaacttc atgaagacga tctcgcgcca ctccttttag
      361 ttcaagagaa cctgggagga agaatctacg ggccctactg ccatgacggt cggcgatact
      421 atttttggcg attgatgggt caatcgcttc gagcatcatt gccgctgttt gcagaacggc
      481 ttccggagtc tcgaaaacgt cgccaattcg cccggtggat tgagagatac gggttaacag
      541 agatattgac gattatgcgc gagctggaac ggctcgaaaa ctgactcaag ctgaaggccg
      601 ctgtcgagcg gtgagataga caagtaggtt tgaaagggct gccggtgtaa gtcctgggat
      661 cttcctcgcg tcgccaaagt tgcgcggccg catgcgctca agtcgctcga tcatctcgtg
      721 cgacaggctc cctactgctt tgaaggaaag ggtctcgggg atggacatcg catcatgctg
      781 acgcagtcgc cgcgatgcct ggttatgcgt gtcgagataa ccggcgtaca ggtaatcggc
      841 cagcgcagtc tcgacctctc gtgggcggat gtttgcccgt tcagacgaag ggagcagttc
      901 gacaatctgt tcccgggtca cgttgggcct gagcgcgagt tgggtgagtg taattgagtc
      961 gccaaggtcc tggcccgtta gccgggagat atccaggtac gctggatctg tccgacggag
     1021 cttagtggca gacagtagtt cgcgcgcttt cgccaaccca tctcgcctct ggttgaatcg
     1081 ttcccactca ctatctccaa ccaagcccaa ctcgcgacct ttcggttcca ggcgcacgtc
     1141 cgcgttgtca tggcgcagcg cgagccggtg ctcagaccgc gatgtgaaca tgcggtacgg
     1201 ctcgtcgaca ccctgtgtta tgaggtcatc aatcaacacg ccgatgtacg actcttctcg
     1261 ctgaacgcgg aacagcgggc gaccagtggt cgccagtccg gcattgatgc cggcgatcag
     1321 tccctggcac gctgcctctt cgtatcccgt cgttccgtta atctgcccgg ccaggaagag
     1381 tcctttaacc cgagcagtct ccagaaatgg cgaaagttct cgcgggtcaa caaagtcata
     1441 ttcgatcgca tagccggggc ggatgatctg cgcctcatcc atcccgggaa tcaaattgac
     1501 gatctcttgc tgaagctggg ccggcagaga agtcgaaagc ccgttcagat aaacctcgtt
     1561 tgtattgaag ccttccggct ctacgaacag ttgatgacgc gtcttctcgg gaaactttac
     1621 gaccttgtct tcgatagacg gacaataccg cgggcctatt ccctggatgg cgccggagta
     1681 aagaggggat tcgtgcagat tggcgcgaat cttctcatgc agctcctggt tcgtataagc
     1741 gagatagcaa ttaagctgtt cctgttcgat ttcgtcagtc gaaaacgaga aggggaccgg
     1801 ccgttcatcg ggaggctgcg gttcaaacgc gtcccaatcg atcgtgcgac cgtcaattcg
     1861 tggcggcgtt ccggtcttca gtcttccgac gggaaatccg aggcgccgca gagccgcggg
     1921 caattcggtc gatgcaggtt cgccggtgcg accgcctgcg taggtcttgc ggccagtgtg
     1981 aatcttgccg ttcaagaatg tccccgtcgc gacgattacc gccttcgccc ccagtcgtcg
     2041 cgcatcctgt aattcaactc cgcagatgcg atcagcgacc acgagcagat cggttaccag
     2101 tccctgtctg agactaagat tgggtgtcgc ctcgagcgtg cgccgcatct cgactcgata
     2161 cagagttcga tcagcttgcg cgcgcggcgc ctggaccgcg ggcccacgtg accgattcag
     2221 cagacgaaat tgaatgccgg tgcgatcgat gacgcgcgcc atgattccgc cgagcgcgtc
     2281 gatttctcgc accagatgtc ctttgccaat tccgccgatc gcgggattgc aggacatctg
     2341 tccgatcaga tccaggttga gcgtcaggag cgcagtgttc gcacccagac gcgcagcgga
     2401 ggacgccgct tcacagccgg catgtcccgc gccaatcacg atcacatcaa aaacttcgtc
     2461 gaagatcatt tattaaaaaa actattcgct caccacgtcg ccgtttactt accgatacaa
     2521 aacgtcgaga agatctgccc aagcatatcc tcagtcgtcg tctcgccggt taactcaccg
     2581 ataaatctta atgcgttatg cagaccaatc aaaacgatct cttcgctcgc accgccgcga
     2641 atgagttctt cggacgatgc aatcgaactc atcgcgcgca ccagaagatc gtgatgccga
     2701 gcgttggtga tcatcaaacc ttcgccggtt ccgttgccgt taacgaaagg tttgaggatc
     2761 gctgcgtgca gatcagagag accgtcttct gttgctgctg aaacagccac ggtcggtgtg
     2821 cgcgagccat ttgcacgcag gcgatcgttg accgactcgt ttgaaaaaga tggcaggtca
     2881 ctcttgttca gtgcgatcac atgagtctta ctcgccgcct gctcgagcac cgcctcgtct
     2941 tcttcgttcg tccgtcgaga gccgtcaatc acaacgatca gcaaatcagc atcagcggcg
     3001 acgcgccgcg tccgatcaac tccgattgat tcgatctgtt ccgtcgtcac ccgaattcca
     3061 gccgtgtcga caagtgtgac ggggacgccg tccagtccga tcggttcaga aattgtgtcg
     3121 cgtgtcgtac cgggaatcgg cgtgacaatg gcccgctcgt gacccagtaa cctgttgaat
     3181 agactggact taccggcatt gggccgacct acaagcgcga ccgtcaaacc atcgcgcagc
     3241 agttgtccgc gcgcaaacgt gctcgccagg gattggaagt ctgcgcgtaa cgattcgagt
     3301 gcacgctcta tctcgtgtcg ctcaagttta ggcagatcat cttcgacaaa ctcgagtgag
     3361 gattccagcc gcacgatgat cttgagcagt tgttccttcg ctggttgaag gcgatgtgag
     3421 atctcgccgg cgagttgtcg cgtggcctgc tgtgccgctg agtcggtctg tgcatcgatc
     3481 aagtcgcgga tggcttcggc ctggcttagt tgtaaacggc cgttcatcac tgcgcgcaac
     3541 gaaaactctc cagggtttgc cagtcgcgca tcgagctgca agatgctgtc gataattcgt
     3601 cgtaacagaa ccggcgagcc gtggcaatga aactcaacaa cgtcatcgcc ggtgaatgag
     3661 tgcggcgctt tgaaatagca gacgagcgcg tggtccagga cttcacgtga aaacggatcg
     3721 accacgtctc gcagcgtcag gtagtttggc tctggatcga ccagctcggg atgcgtcatg
     3781 cggcgaagaa tcgatagaga ggcgggtccg ctgacgcgga tgacaccaat cccaccgcgc
     3841 cccggaggcg tggacaaagc cacgatcgaa tcctcttgga aactcatcgg aaaccaggcg
     3901 gagggaaaac ctaagacgaa ctcgcggcaa ccttaagagt gacgcgcagg cggcgagcgt
     3961 taccttcacc gatggattcg gtgtagaggt cggactcttc agctaacgtg agatgaatca
     4021 cgcggcgttc gttcgaatcc attgggccga acacgaacgc cgacgatgag gaacgaacct
     4081 gccgcgcggc gtgctgcgcc atggcgcgta attcagcttc gcgtgccgcc cggaaattat
     4141 cagcgtcgca gacgatccgt tggcctttcg gcaagtcgcg cccatatgcc tgattaagaa
     4201 tctgttgaag ggcatccagt agttcgccgc cttgattcaa caatagaccg ttgtcgggcc
     4261 cgtcgattga gagcaggcaa ccttgttcgg attccgcggc ggaagcgcgc aggtcgaagc
     4321 ccgctccttg aagaatcccg ttagctaact cttcggtctt ggtacagatt tcctgcattt
     4381 ggttaggggt gattgtaccg caacaggaga cgaagtctct accgtggaag ttactgggcg
     4441 gtcggtgaag aaagggaaag gtcactcttt cttgcgaacg tagatgtcgc cgcgtttctt
     4501 caagccagct ttagtggcga cggtgtagag aactgaatcg atgagatctt tgttatccag
     4561 acgaaagctt gtgacgcccg cggccttact atcgggatca tcgtattgga tcgtcaggta
     4621 gcgcaccttg gttttgatga agctggccgg tatgccgtaa aaaggtatgt ggctcgcgac
     4681 agtagctgcg gcgggttgtt tgtagtgaga atcgccgtac gccccggtga ttgagccaaa
     4741 gggaatgtga aacatttctt tgcccttacc gtcgctgaag accaggcgat tattagtgct
     4801 gtcgatcgtg agtgtgccgg tcttcttctt gctgtaacca aacactccgc cctcatactt
     4861 ggccctaacc gttggtggag ccggaggcgg gggtgtcact acctggttgg gatcatcggc
     4921 agtcgtccgc ggacgttgtg ccgcaaccgg gagagcgctg attacgaaga aaagcccgag
     4981 aacggcagca aaaacgtatt ttttgagcat gggtggagaa tctcccgtcg aattgactgg
     5041 atgtctgctt ttaaagacgc gttacacgcg tttgaagttg ccaccggtcc gctcggacat
     5101 caccttccgc gcgcccggct aatttgattt tccgagaagg tgtaacgcgt ggtcttgagt
     5161 ttcccgttca ggaaagtata gacaacccct tccttcaagt ttcgaaaaat cagcgcatcc
     5221 ttagcttctt cgcgtgtgaa gtcacggttc tttagcaaac tcatcgagtc cggggtatca
     5281 gaggagcttt catgctgaag gatgatttgc agaactgttc cttcaagttc gggtcgtagt
     5341 ttttttgtgc gaacaaaatt cgcatcgaca aagctgaaag acgccgtacc gccgagaatt
     5401 ttgaacgtaa gcggaccgcc gaatgggtcg ctgaggggct cgcctaacgc ttgaagaact
     5461 tcgccgcgcc gcgacttaaa tggttcgagc ccttgccacg atgcggccct aaccgcgctt
     5521 gaacagaacg cgagcgcaat aatggcgatt gaaaatcgga gcgcaagact cccacgtgcg
     5581 cgacttgttt tcatgcgaca gatgctaatg cagcctcagg tttttgcaaa gggacggacg
     5641 cgctcggcag attccttcaa atcggaatcg ttcggcgcca gttgcagtcc gcgctcgtac
     5701 gcaacaagtg ctttcccgta ttgcttcgaa acctcgtagt cgtaaccgag catgcgatag
     5761 atgttcacgt cgtccggcgt cttctcggca gctcgctcca acgcgagaat cgccttcgga
     5821 taattcttcg tctgcgtatg tgac
//
LOCUS       DATDBY010000149         2311 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_500354, whole genome shotgun sequence.
ACCESSION   DATDBY010000149 DATDBY010000000
VERSION     DATDBY010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_500354"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..321
                     /locus_tag="VIT19_02965"
     CDS             <1..321
                     /locus_tag="VIT19_02965"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5837968.1"
                     /translation="GFDKRVTDEGAVSIKSMAFEIAPGLESAAIVDSWAGFRPHAPDD
                     LPVLGPAGDIRGLFYATGHYRNGILLAPITAEIIGEAVVNRKSSRLLESFSPNRFRLA
                     AASR"
     gene            366..1646
                     /locus_tag="VIT19_02970"
     CDS             366..1646
                     /locus_tag="VIT19_02970"
                     /inference="COORDINATES: protein motif:HMM:NF014713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein/redoxin"
                     /protein_id="HEY5837969.1"
                     /translation="MAEFEFTASVWETVRAKKEMGISLFNILIAFAGGLLSFLSPCVL
                     PLVPGYISLMSGVSVDHLKEGAANSRRAVIANSLAFNAGLSVIFLTLGATAGYIGSAI
                     FGNFWVRMISGLVIIVFGLHLIGLLKIKYLYADTRHFKSDEPRGIWGSLMLGIAFAAG
                     WTPCIGPILGGIIGLAATTGGWKGGLILSAFYSAGLAVPFLVTGLGINQFLGFYTKFR
                     RHLHKVEVVSGIVLILIGLLILSNKVTILNSARLAGWLPDWESRLKLRDTGQANSNNI
                     QGARQAPDVEFTKLDGSAFRLNDLRGRVVVLNFWATWCVPCRAEMPEFNQMQRELEQH
                     GLSVVGASVSPLDTPDVIRSFQQDVKQDYTIVRGAEEIGSQFQNGPGLPVTHILDREG
                     RIRKTFFGPQSREVFESVVRPLLDETVKSARASN"
     gene            1662..2270
                     /locus_tag="VIT19_02975"
     CDS             1662..2270
                     /locus_tag="VIT19_02975"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY5837970.1"
                     /translation="MKKAVLIFAALILTATAAHAQNNEFAPIVEKTVNYKNWTLNDLA
                     TSKPANLRSLMQGKKLVMVLYFAPWCPNWRNEAPVAARLYDKYKSQGFEIVAVSEYAS
                     AADSRAYFGPNGAPYPVVVESETREDRDKTPHYAYRQLTGDTRKWGSPWNIFLDPAKC
                     NSTGDVLTERAFVVNGELIEAEADKFIADRLKTNAAITPCKP"
BASE COUNT          476 a          611 c          686 g          538 t
ORIGIN      
        1 ggattcgaca aacgcgtgac ggacgaaggc gcggtctcta tcaagtcgat ggcttttgaa
       61 atcgcgccgg gacttgaatc ggccgcgatt gtggactcat gggcgggttt ccggcctcat
      121 gcgccggatg atctaccggt gctcggtccg gcgggcgaca tccgcggttt gttctacgcg
      181 acgggtcatt accgaaacgg catcttgttg gcgcccatca ccgcggaaat tattggggaa
      241 gcagtcgtta acagaaaaag ctcccggctg ctcgagagtt tctcgcccaa tcgttttcgg
      301 ttagcggctg cgagccggta aacagcatct aatttgagcg cgtttacgcc gtctcacggc
      361 agaagttggc cgagtttgaa tttaccgcct cagtttggga aactgtccgc gctaagaaag
      421 aaatgggaat ttcgcttttc aatattctaa ttgccttcgc cggcggactg ctgtcgtttc
      481 tgtcgccgtg cgttctgccg ctggtgccgg gctacatctc tttgatgtcg ggcgtcagtg
      541 tcgatcattt gaaagagggc gctgcgaatt cgcgccgcgc ggtgatcgcc aactcgctcg
      601 cctttaacgc gggcctatcg gtgatatttc tcactttggg tgcgaccgcc gggtatatcg
      661 gctcagccat cttcggaaac ttctgggtgc ggatgatcag cggtttagtg atcatcgttt
      721 tcggtttgca cctgatcggg cttttaaaga ttaagtacct ctacgcagac acgcgccatt
      781 tcaaaagcga tgagccgcgc ggtatctggg gttcgctgat gttgggaatc gcctttgcgg
      841 ccggatggac gccctgcatc ggtcccattc tcggtggaat cataggcttg gctgcgacga
      901 ccggcggatg gaaaggcgga ctgattctgt cagcatttta ttccgccggg ttggccgtgc
      961 cgtttctggt gaccggcctg ggcatcaacc agtttctggg gttctacaca aagtttcggc
     1021 gtcatttgca caaggtcgaa gtagtttcgg gcattgtgct gatcttgatt ggcctgctga
     1081 tcctgagcaa caaggtgacg atcctgaaca gcgcgcggct tgcgggctgg ctgcccgatt
     1141 gggagtcgcg tctgaaattg cgtgataccg ggcaggcaaa ttcaaataat attcagggag
     1201 ctcgccaggc cccggacgtt gaatttacga aactggatgg cagcgctttt cgtcttaacg
     1261 atctgcgcgg ccgcgttgtg gttctaaatt tctgggctac ctggtgcgtt ccgtgccgcg
     1321 ctgagatgcc tgagttcaac caaatgcagc gtgagctcga gcagcacggt ctctcggtcg
     1381 tgggggcgtc ggtttcacct ctcgacacac ccgacgtgat tagaagtttc caacaggatg
     1441 ttaagcagga ttacacgatc gtgcggggcg ccgaagaaat tggtagccag tttcagaacg
     1501 ggccgggtct gccggtcact catattcttg accgcgaagg ccgcattcgc aaaaccttct
     1561 tcgggccaca gtcgcgtgaa gtcttcgagt ctgttgtaag acctttattg gacgagaccg
     1621 taaagtcggc ccgagcgagc aactaaccgg ggtgtgattt catgaaaaaa gcagtactaa
     1681 tcttcgcggc tttgatcctg acagcgacgg cggcgcacgc gcagaacaac gagttcgcgc
     1741 cgatcgttga gaagaccgtc aattacaaga actggacgct gaacgatctc gcgacgagca
     1801 agccggcgaa cctgcgttcc ctgatgcagg gaaaaaagct cgtgatggtg ctctactttg
     1861 cgccgtggtg tccgaactgg cgcaacgaag cgccggtcgc agcgcggctg tacgacaaat
     1921 acaagtcgca gggttttgaa attgtggccg tcagcgagta cgcatcggcc gcggattcac
     1981 gcgcgtattt cggtccgaat ggcgcaccat atcccgtcgt cgttgagtct gaaacacggg
     2041 aagatcgcga caagactccg cattacgctt accggcaact gaccggcgac acgcgaaaat
     2101 ggggctcgcc ctggaacatc tttctcgatc cggcgaagtg caactcaacc ggtgacgttc
     2161 tgaccgagag agctttcgtg gtgaacggcg aattgatcga agcggaagcc gacaagttca
     2221 ttgcggatcg cctgaagacg aacgcggcca tcacaccgtg taagccgtaa tccatcccgc
     2281 taaagcttga actctgaacc tgagtcctcc g
//
LOCUS       DATDBY010000150         2322 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2605709, whole genome shotgun sequence.
ACCESSION   DATDBY010000150 DATDBY010000000
VERSION     DATDBY010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2605709"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            179..1363
                     /locus_tag="VIT19_02980"
     CDS             179..1363
                     /locus_tag="VIT19_02980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837971.1"
                     /translation="MNGTGDSQGGPDLYSWLTFVAANWPVDPTTCTANASASILTSAP
                     DPVWLSYLSSDEIFVASGLPTGWCHTPTAPGARFASADEARTAQRAGRLAKLPPKVRA
                     LAEQHPEVRLFLHNNSKAHDLLLSTTSVTNVSSQMKGILDATNQVVTDQNGRFLRFTV
                     NIGPIEYQYIIQNKLWTKDGQEATGDLNFTNGAMEFKAAWKVLGANDDPTHFFTQQAI
                     VYNDADGNPSPGPNPVTVGLAALHITHKTPRQPRWLWSTFVQADLNKGFNNPNCPASQ
                     CPPNVQTAPTPFVELNSDGSPRNKPVQVVQQSPSTAGTLNTTFQGLLKGTPWAYYQLI
                     STQWQGGSGPPTKPAQLGNPLLETFVSITNPYSCLDCHNFAHDSPGGKKSDFSFAINA
                     KQ"
     gene            complement(1396..>2322)
                     /locus_tag="VIT19_02985"
     CDS             complement(1396..>2322)
                     /locus_tag="VIT19_02985"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: protein motif:HMM:TIGR01122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transaminase"
                     /protein_id="HEY5837972.1"
                     /translation="GPAVFRLREHMQRFLNSAKVFRMDHDWSVDDFCEAAVELVRRSG
                     LDQCYIRPILFRSLDEEKPAFGVNPFPNPLACYIGAWDWGKYLGDEAIEKGVDVCVSS
                     WNRLSPNSLPPMAKSGANYMNSQLIKMEALVNGFAEGIALDDRGYVSEGSGENIFVVA
                     NGIVNTPPLSSSVLPGITRDSVIQICGELGLTIKERSIQRAALYVSDELFFSGTAAEI
                     TPIRSVDRITIGNGARGEITEKIQKVFFEITKGERPAPGPWLTYVNEQEERAADKPGA
                     SATDNGTRRKVKKEKPDKPAELVAKAHAAVAD"
BASE COUNT          525 a          687 c          635 g          475 t
ORIGIN      
        1 aacaatcaca gttgcgatct tattaacggc actcgcgatc gcttgttcca ggaacgcgcc
       61 cggaccgcaa atgaccgcga cgcccgctgt tatcaattgc gccgcggccg aggtgccgag
      121 caactttccc ccaacgccaa atacgattga tagcacttgc gccaagatcc ctacggacat
      181 gaacggcacc ggcgacagcc agggaggtcc ggatctttat tcgtggctaa ctttcgtagc
      241 cgcgaactgg cctgtcgatc caacgacctg caccgcgaat gcgagtgcga gcatcttgac
      301 ctcggcgcct gatcccgtgt ggctaagtta tctaagcagc gacgaaattt ttgtagcttc
      361 cggccttccc actggttggt gccacacgcc gacggctccc ggggcgcgct tcgcgagcgc
      421 ggatgaagca cggacggcgc aacgcgccgg cagactcgcg aagctgccac cgaaagtccg
      481 cgccttggct gagcagcatc ccgaggtacg actgttccta cataacaatt ccaaggcgca
      541 cgacctgctg ttatcgacaa cgagcgtgac taatgttagc tctcagatga aaggcattct
      601 ggacgcgaca aaccaggtgg taaccgatca gaacggacgc tttcttcgct ttaccgtcaa
      661 catcggaccg attgaatacc agtacataat ccagaacaag ttgtggacca aggacggaca
      721 ggaggccacc ggggatctga atttcacgaa cggcgcgatg gagttcaagg ctgcctggaa
      781 ggtgctcgga gccaacgacg acccgacgca cttcttcact cagcaggcga ttgtgtataa
      841 cgacgcggat gggaacccaa gcccgggacc aaatcctgtg acagtgggtc ttgccgccct
      901 gcacatcaca cataagacgc cgcggcagcc gcgttggctc tggtcaacgt ttgtgcaagc
      961 agatctaaac aaaggattca acaatccgaa ctgcccggca tcgcaatgtc cgccaaacgt
     1021 gcagacggcg ccaacgcctt tcgtcgaact taattcagac ggcagtccgc gcaataaacc
     1081 tgtgcaggtt gtccaacaga gcccctctac ggcgggcacg ctgaacacca cctttcaggg
     1141 actgctcaag ggaacaccat gggcctatta ccagttgatc agcacccaat ggcagggtgg
     1201 gtcaggacca cctaccaaac ccgcgcaact cgggaatccg cttttggaaa ccttcgtctc
     1261 gatcacgaac ccgtatagtt gtttggattg tcacaacttc gcgcacgact caccgggagg
     1321 aaagaagtcg gatttcagtt ttgcgatcaa tgcgaagcaa tgaggtttgt ggcgcgggcg
     1381 cggaaactcc tgctatcagt cagccacagc agcgtgggct ttcgcgacaa gttcggccgg
     1441 cttgtctggc ttttctttct taactttccg acgagtgccg ttgtctgtcg cgcttgctcc
     1501 cggcttgtcg gcggcgcgtt cctcttgttc attcacataa gtgagccagg ggccgggcgc
     1561 cggtcgctcg cctttagtga tctcaaagaa caccttctga atcttttcgg tgatttcgcc
     1621 acgcgcgccg ttgccgatgg tgatgcggtc aacggaacga atcggcgtaa tctctgccgc
     1681 cgtaccgctg aagaacaatt cgtcagaaac gtaaagcgcg gcgcgttgaa tgctgcgctc
     1741 tttgatcgtc aggcccagct cgccgcaaat ctgaatcacg ctatcgcggg tgatgcccgg
     1801 cagaacggaa gatgaaagcg gcggcgtgtt cacgatgccg ttagctacga caaagatgtt
     1861 ttcgcccgag ccttcggaaa cgtaaccacg atcgtcaagc gcgatgcctt cggcaaaacc
     1921 gttgaccaga gcttccatct tgatcaattg cgaattcatg tagttcgccc cgctcttggc
     1981 catcggcggc agcgaattcg ggctcaggcg gttccagctt gagacacaga catcgacgcc
     2041 tttctcaatt gcttcatcgc cgaggtattt gccccagtcc cacgcgccga tatagcaggc
     2101 cagcggattc ggaaacggat tgacgccgaa cgcgggtttc tcttcatcca aactccggaa
     2161 cagaattggg cggatgtagc actggtccaa accgctgcgg cgcacgagtt caacggcggc
     2221 ttcgcagaaa tcatcgacgc tccagtcatg atccatgcgg aaaacttttg cggaattcaa
     2281 gaagcgttgc atgtgttcgc gcaggcgaaa gacggccggc cc
//
LOCUS       DATDBY010000151         4060 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2141672, whole genome shotgun sequence.
ACCESSION   DATDBY010000151 DATDBY010000000
VERSION     DATDBY010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4060
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2141672"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="VIT19_02990"
     CDS             <1..191
                     /locus_tag="VIT19_02990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837973.1"
                     /translation="RLLAPDRRFYVVGDQVSQLPGWQEGAMMSAQHVVEQIGGRRLKT
                     VPLIKRAPNTRRLIHGRG"
     regulatory      366..441
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            588..>4060
                     /gene="metH"
                     /locus_tag="VIT19_02995"
     CDS             588..>4060
                     /gene="metH"
                     /locus_tag="VIT19_02995"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR02082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HEY5837974.1"
                     /translation="MSTFLQTLKERIIVFDGAMGTNLQVQNLSLEDFGGLRFEGCNEN
                     LLITRPDAVENVHKAFLDVGCDVIETNSFNGTTVDFAEYDMADQTYDMNVRAATLAKR
                     IASDYSTKDKPRWVAGSMGPGRKLPTLGHISFVDLKAAYAEQVRGLLDGGVDLLIVET
                     CQDLLQTKAALSAIFENFKRNGRRVPVISQVTIEVFGTMLNGTEIGAALTALAPFPID
                     VIGMNCGTGPRHMTESIRYLCENAPLPVSVLPNAGLPSVVEGKMHYDETPETFTSQIV
                     HFANDFGVNIVGGCCGTTPAHLKLVVEAMQAITPKSRDAKLVPAASSIYFQQPYVQDA
                     SFLIVGERVNASGSKKMRDLLNAEDWDGLVSLAKEQEREGAHILDVNVDFVGRNGEAD
                     MHELASRLVTSIKLPLMFDSTEWEKMEAGLQHAGGKCILNSTNYEDGEPRFAKVIDLA
                     KRYGASVVIGTIDEEGMARTAEGKFKIAKRAYEQATGELSLPASDIFFDPLALPISTG
                     IEEDRRNALETIEGIKRIKAELPGCYTILGVSNISFGLNPASRVVLNSVFLHDAVEAG
                     LDAAIVNASKIEPLNRIGEQELKVARDLIYDRREFDGDVCTYDPLTQFTTLFENVKTK
                     SAKKASKGATVEERLKNHIIDGEKIGLEDELKTALETYSALDIINNILLEGMKVVGDL
                     FGSGQMQLPFVLQSAEAMKAAVRFLEPFMEKKGGATAKGTMVLATVKGDVHDIGKNLV
                     DIILTNNGYRVINLGIKQTIDTILNAYEEHQADAIGMSGLLVKSTLIMKDNLEVMNER
                     SIGVPVVLGGAALTRKYVEDDLKSIYKGTLYYARDAFAGLHTMDKLMSGEVAQTSVAV
                     SEPGAVATGSELNVEEEEVLIGEEAKLGIRKPARVRASGPSGDTTHTTRSKVANDVPI
                     PEPPFLGSRVVDDIPLKDVFAYVNETALFKGQWQFKQGRRSAEEYQAIVAEHVRPVYE
                     ELKQRSEQQGLLIPKVVYGYFRCQSSGNDLIIYQDDGKTERNRLTFPRQPSGKHLCLA
                     DYFASVDSGRVDVAAFHLVTMGRRATEYSQELFKSDNYAEYLYFHGLSVEGAEALAEL
                     WHKQIREQLGIAGKDAQNLNELFRQGYQGSRFSFGYPACPNLEDQTKLFDLLDPSRIN
                     VELTEEFQLDP"
BASE COUNT          962 a         1093 c         1166 g          839 t
ORIGIN      
        1 cgcgactttt ggcaccggat cgccgcttct acgtagtggg cgatcaggta tcccaactgc
       61 cgggctggca ggaaggagcg atgatgtctg cacagcacgt cgtcgaacaa ataggcggca
      121 gacggttgaa gaccgtgcca ctgatcaaac gcgcgccgaa tacacgccgc ttgattcatg
      181 gccgtgggta agagtggcct ggacagtttg gagtgcggcg actagtcgcc gcttcgtggc
      241 ggccaaaaac agttttcgaa taaagacgca aagacgcaaa acaagaaagg cgcagagttc
      301 aaatcaagcc attgccgttg ggagcgttgt cttgacactg ctaaccggcg atgtttcaat
      361 agccgttgat aaaacgtggt gagttaaggc gacttgcggc cacgtaaaac aatccgctaa
      421 acagctcggc gagtctttca accgctgctt tctaaaaggt tcaaagaaag gccccgcgtt
      481 gttggcagcg cggggctttt tctcgtaaat cgtcaatggt aaatcgtaaa tagcaggctc
      541 agccgataga cgtcttctat ttactattca cgattaacga ttcaccaatg agcacgtttc
      601 ttcaaactct aaaagagcgc atcatcgtct ttgatggggc gatgggtacg aacctgcagg
      661 ttcagaacct gtcgctggaa gatttcggcg gtctgcgctt cgaaggctgc aacgaaaatc
      721 tgcttataac ccggcccgac gcggtggaga acgtccacaa ggcattcctt gatgtcggtt
      781 gtgacgtgat cgagaccaac tctttcaatg gcacgacggt cgactttgcc gagtacgaca
      841 tggccgacca gacgtatgac atgaacgtca gagcggcgac gttggcaaaa cgcattgcgt
      901 ccgactattc gaccaaagac aaaccccgct gggtcgccgg ctcgatgggt cccgggcgca
      961 aactcccgac gctgggccat atcagcttcg ttgatcttaa ggcggcgtat gccgaacagg
     1021 tgcgcgggct cctggatgga ggtgttgatt tactaattgt cgagacctgc caggacttgt
     1081 tgcagacgaa ggcggcgctc tccgcaatct ttgaaaactt caaaaggaat ggccggcgcg
     1141 tgccggtgat ttcccaggtc acgatcgaag tgtttggcac tatgctcaac ggcacagaga
     1201 tcggcgccgc gctgacggcc ctcgcccctt ttccgattga tgtcatcggc atgaactgcg
     1261 gcacgggacc gcggcacatg accgagagca ttcgttacct ttgcgagaac gctccgctgc
     1321 cggtttcggt cctgcccaac gcgggcctgc cttcggtcgt cgaaggcaag atgcattatg
     1381 acgagacgcc ggaaaccttt acgtcgcaaa tcgtccactt cgccaatgac tttggcgtca
     1441 acatcgtggg cggctgttgc ggtaccacac ccgcgcatct gaagctggtc gtcgaagcca
     1501 tgcaggccat cacgcccaag tcccgtgacg ccaaacttgt gccggccgcg tcgtcaatct
     1561 atttccaaca gccgtacgtt caggacgcat cctttctaat cgtcggcgag cgtgttaacg
     1621 ccagcggttc gaagaaaatg cgcgacctac tcaacgctga agactgggac ggactggtct
     1681 cgttggcgaa ggagcaggag cgcgagggcg cgcacattct tgacgtgaac gtcgatttcg
     1741 tcggacggaa tggtgaagct gacatgcacg agctggcttc ccgtttggtc accagcatca
     1801 agttgccgct catgttcgat tccactgagt gggaaaaaat ggaagccggt ctgcagcatg
     1861 ccgggggcaa gtgcatcctc aattcgacga attacgagga cggcgagccg cgctttgcga
     1921 aagttataga tctagccaag cgctatggcg ccagtgtcgt catcggcacc attgacgaag
     1981 agggaatggc gcgcaccgcg gagggcaaat tcaagatcgc gaagcgcgct tacgaacagg
     2041 ctaccggtga gctctctctt ccggcgtccg acattttctt tgatccgctg gcgttgccga
     2101 tctcaaccgg cattgaggag gatcggcgta acgcgctcga gacaattgaa ggcatcaagc
     2161 gaatcaaagc agagttgcct ggctgctaca caattctcgg cgtgtccaac atttccttcg
     2221 ggctgaatcc ggcatcgcgc gtggtactca actcggtgtt tcttcatgac gccgtggaag
     2281 ctgggctgga tgcggcgatt gtgaacgcca gcaaaatcga gcccttgaat cgcatcggcg
     2341 aacaggaact caaagtggcg cgcgatctga tctatgaccg gcgagagttc gacggtgatg
     2401 tctgtaccta cgatccgctg acgcagttca ctacgctttt cgagaacgtc aaaaccaaga
     2461 gtgccaaaaa agcgtcgaag ggcgcgacgg tcgaagagcg gctaaaaaac cacattattg
     2521 atggtgaaaa gatcggcttg gaagacgagt tgaagactgc gctcgaaacc tattccgcgc
     2581 tcgacatcat caacaacatt ctgctcgaag ggatgaaagt cgtcggcgac cttttcggca
     2641 gcggccagat gcagctaccg ttcgttttgc aatccgccga agcgatgaag gctgcggtac
     2701 gcttccttga gccgttcatg gaaaagaagg gcggcgccac tgccaaaggc acgatggtgc
     2761 tggcgacggt caaaggcgat gtgcacgaca ttggcaaaaa cctggtcgac atcatcctga
     2821 cgaacaacgg ctatcgggtg atcaatctcg gcatcaagca gaccatcgac acgatcttaa
     2881 atgcttacga agaacaccag gccgacgcca tcggcatgag cggcttgctg gtaaagtcca
     2941 ccctgatcat gaaggacaac ctggaagtca tgaacgaacg tagcattggc gtgccggtgg
     3001 ttctgggcgg agcagcgttg acccgaaagt atgtggaaga cgatttgaag tccatttaca
     3061 agggcactct ctattacgcg cgcgatgcct tcgccggcct gcatacgatg gacaagctga
     3121 tgtccggaga agtggcccag acctcggtcg cagtgtcaga accgggagcg gtagcgaccg
     3181 gatcagaact caacgttgag gaagaagaag tgttgattgg tgaggaagct aaacttggca
     3241 ttcgcaaacc ggcgcgggtt cgcgcttcgg ggccgagcgg cgacacgacg cacaccacgc
     3301 gctccaaggt cgccaatgac gttccaattc ccgagccgcc attcctcggc tcgcgcgtcg
     3361 ttgatgacat tccgctgaaa gatgtcttcg cttacgtcaa cgagacggcg ctcttcaaag
     3421 gtcagtggca gttcaagcag ggaaggaggt cagccgaaga atatcaggcc atcgtcgctg
     3481 agcacgtcag gcccgtttac gaagaactca agcagcgcag cgagcaacaa ggtttgctga
     3541 ttcccaaagt tgtctacgga tatttccgct gccagtcatc cggcaatgac ctgattattt
     3601 atcaggacga cggaaagacg gaacgcaacc gcctgacgtt cccgcgacag ccttccggaa
     3661 aacatctctg tctcgcggat tattttgctt cggttgattc cggccgcgtg gacgtcgccg
     3721 cctttcatct ggtgacgatg ggccggcgcg caaccgagta ctcgcaagag ctgttcaaga
     3781 gcgacaacta cgcggagtat ctgtattttc acgggctgag tgtcgaagga gccgaagccc
     3841 tggcagaact ttggcacaaa cagattcgcg aacaactcgg aattgccggc aaggacgcgc
     3901 agaatttgaa tgagttgttc cggcagggtt accaaggctc gcgcttcagc ttcggctatc
     3961 cggcgtgtcc caatctggaa gaccaaacga agctgttcga cttgctcgat ccttcgcgca
     4021 tcaatgttga actgaccgaa gagttccaac tcgatcccga
//
LOCUS       DATDBY010000152         2035 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_499944, whole genome shotgun sequence.
ACCESSION   DATDBY010000152 DATDBY010000000
VERSION     DATDBY010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_499944"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..786
                     /locus_tag="VIT19_03000"
     CDS             <1..786
                     /locus_tag="VIT19_03000"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY5837975.1"
                     /translation="HDLYVAPDWGERFAELVDAHVQLPKEGRALYVAAGTGSHALALK
                     ERAGEKLQFLCVDESDECLELARAKGAAINEKTQFQREVPSSLSQADDQFDLVLGNAS
                     MTRPGGLRAILSELVRVAAPGGTVAFWLPTTSSFGEFFSIFWEALLNAELEDHGVDVE
                     LMITELPSASEVKKLAQSEGLDAVQSWTVVEEFDYKSAEQFFNSPLMTDFLLAGWLGS
                     VPEAAKERVIEELASIIDEERHSGAFVLSLKATLVVGKKGRIQ"
     gene            complement(789..1037)
                     /locus_tag="VIT19_03005"
     CDS             complement(789..1037)
                     /locus_tag="VIT19_03005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014461314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEY5837976.1"
                     /translation="MRLLLFVIGTEWIIVLVVVAILLLFGGTKLPQLAKALGQSKKAF
                     KEGIDEGETDSRSKLNSVDDEALFDEARRRAAAKKIDQ"
     gene            complement(1065..1610)
                     /locus_tag="VIT19_03010"
     CDS             complement(1065..1610)
                     /locus_tag="VIT19_03010"
                     /inference="COORDINATES: protein motif:HMM:NF025637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEY5837977.1"
                     /translation="MNARVLVLNASFEPINVCTERRAVVMIFKGVARMEEHNGHMLHS
                     QRIEMHAPSVIRLTEYRHIPFERRSLSRKNILLRDHSCCQYCGKQFSPAELTLDHITP
                     RSRAGESSWDNLVACCKRCNHRKGNRTPEESGMHLLRRPRAFSLHVNRQIMRYIGRAD
                     EVWRKYLFYESDGHSELCVRE"
     gene            complement(1741..>2035)
                     /locus_tag="VIT19_03015"
     CDS             complement(1741..>2035)
                     /locus_tag="VIT19_03015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837978.1"
                     /translation="ADDSKPLPQWLTGTVLREWEATAPSMTLRHQSPMASHLRSPRTL
                     LPGFRHRWPNAIEGTVVSRALFNDLPRFPFQLRAYMMRGAHFALGLPKNWPAD"
BASE COUNT          436 a          555 c          617 g          427 t
ORIGIN      
        1 cacgacctgt acgtcgcgcc ggattggggc gaacgcttcg ccgagctggt cgatgcgcac
       61 gtccaactgc caaaagaagg acgcgcgctt tacgtggcgg cgggaacagg tagtcatgcg
      121 ctggctttaa aggagcgcgc aggagaaaag ctccaattct tatgcgttga tgaaagcgac
      181 gagtgtctcg agttggcccg cgcaaaagga gccgcgataa acgagaagac gcagtttcag
      241 cgcgaagtgc cgtcgtcact gtcccaggcc gacgatcagt tcgatttggt tttaggaaat
      301 gcgtccatga cgcggccggg cggcctgcgg gccatcttgt cagaactggt gcgcgtagct
      361 gcgccgggcg gaacggtcgc gttttggctg ccgacgactt ccagcttcgg cgaattcttt
      421 tcgatttttt gggaagcttt gctcaacgcg gagctcgaag accacggcgt tgatgtcgaa
      481 cttatgatca ccgagctgcc gagcgcgtca gaggttaaaa agctcgcgca aagcgaaggg
      541 ctcgacgctg ttcaatcgtg gacggtggtt gaggagttcg actataaatc agccgagcag
      601 tttttcaatt cgcctttgat gacggatttt ctgctggcgg gttggctcgg ttcagttccg
      661 gaagcggcaa aagaacgggt aatcgaggaa ctcgcgagca tcatcgacga agaacgccac
      721 agcggcgcgt ttgtcttaag cttgaaagct acgttagtgg tgggaaaaaa gggaaggatc
      781 caataaatct actgatcaat ctttttggcg gccgcccgcc ggcgcgcctc atcaaacaaa
      841 gcttcgtcgt caactgaatt gagtttgctg cgcgaatctg tttcgccttc atcgatgcct
      901 tctttgaagg ctttcttgct ctggccgagc gccttcgcca attgcggaag cttggtgccg
      961 ccgaacagca aaaggatcgc cacgaccacc agtacgatga tccattcagt cccaatcaca
     1021 aaaagcagaa gtctcataag ttctccttgc gcagctcagg cgcgttattc gcgcacgcac
     1081 aactcgctgt ggccatcaga ttcgtagaac aggtacttcc gccaaacctc gtccgcgcgg
     1141 ccgatgtagc gcatgatttg ccgattcacg tgcagtgaaa atgcgcgcgg tcgtcgcagc
     1201 aggtgcatgc ccgactcttc cggcgtgcga ttgcctttcc ggtgattgca gcgtttgcag
     1261 cacgccacca gattgtccca ggacgattca ccggcgcgcg aacgcggagt gatgtgatcc
     1321 agagtcagtt cagccggcga aaactgctta ccgcaatact ggcagcacga atgatcgcgc
     1381 agcagaatgt tcttgcgcga aagcgagcgc cgctcaaaag gaatgtgccg gtattccgtc
     1441 aggcgaatta ctgacggcgc gtgcatctcg attctttgcg agtgcagcat gtgaccgttg
     1501 tgctcttcca tgcgcgccac gcctttaaag atcatgacca ccgcgcgccg ctcagtgcat
     1561 acattgatcg gctcgaacga agcattcagg accaggacgc gcgcgttcat ggtgtaggcg
     1621 atattacgcg agcctgtcgg aaagtgtcaa aaaatcgtgt cggagagtcc gggtttggtt
     1681 tgcgaaagtg gccgggcgtc tcgccgtcaa tcagcgcaga atgcgcgtgc cacattcccg
     1741 tcaatccgcg ggccagttct tcggcagccc cagcgcgaag tgtgctccgc gcatcatgta
     1801 ggccctgagc tgaaagggaa accgcggcag gtcattgaag agagcgcggc tgacgacggt
     1861 gccttcgatg gcattgggcc agcgatgccg aaaaccgggg agcagggtgc ggggcgaacg
     1921 gaggtggctt gccattggcg actggtgcct taaggtcatc gagggcgcgg tcgcttccca
     1981 ctccctcaac acagtgccgg tcagccactg tggcagaggc ttcgaatcgt cggcc
//
LOCUS       DATDBY010000153         3249 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_708535, whole genome shotgun sequence.
ACCESSION   DATDBY010000153 DATDBY010000000
VERSION     DATDBY010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3249
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_708535"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1191)
                     /locus_tag="VIT19_03020"
     CDS             complement(<1..1191)
                     /locus_tag="VIT19_03020"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY5837979.1"
                     /translation="MVDLGAYKDKFGDSGQRVLEKALGESRRRDQNYITVEHIIHALA
                     KEESELFNSTIRSLAVDPDAVTGAIDRRLDNARQHVGKGFRIAPDTTDLFKRAMERAR
                     SRGRKTIESTDIFDVLSKDDSLLMEVLRGLGATPDLVVERIKTNVDERERQEEQYRKK
                     FELPAYLKHFGVSLNRMARQDKIAPTIGREREIQQIIEILCHRERANSPMLVGEPGVG
                     KTAVIEGLARMIELEPERVPARLRNSHVVQLQMGGIVAGTMLRGMFEERIKGIIDEVK
                     ERDNLILFIDEAHTIIGAGAALGTSSDAANMFKSSLAKGELRIIGATTLTEYKEYIAE
                     DEALARRFRLVKVDEPSIIETREILLGVRPRLERNYSVQISDEAINTALEMAPKYIRN
                     LHLPD"
     gene            complement(1372..>3249)
                     /locus_tag="VIT19_03025"
     CDS             complement(1372..>3249)
                     /locus_tag="VIT19_03025"
                     /inference="COORDINATES: protein motif:HMM:NF019344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY5837980.1"
                     /translation="DLGSMLAGAKYRGEFEDRLKAVLKEIESAQGQIILFIDELHTLV
                     GAGAAEGAIDASNMLKPSLARGELRCVGATTLNEYKKYIEKDAALERRFQQIYVGEPT
                     VEDTIAILRGLKERYEVHHGVRIKDSAIVAAATLSNRYITDRFLPDKAIDLIDEAASR
                     LRIEIDSLPQEIDQLEREIMQLEIERQALQREEDDRSKARLREIEQRIADLKEKSSGM
                     KAKWQSEKAIIEHIRGAKAELEQLKLQLDQARNGGDLGRASEIQYGQIPELQQKLEAE
                     QAKLGTLQLDGVTLKEEVDEEDVAEVVAKWTGVPVTKMLEGEMHKLLGMEERLRQRVI
                     GQDEALQAVANAVRRARAGLQDPNRPVGSFIFLGPTGVGKTETARALAEFLFDDERSM
                     VRLDMSEYMEKHAVARMIGAPPGYIGYEEGGQLTEAVRRRPYAVILFDEIEKAHSDVF
                     NVLLQILDDGRLTDSKGRTVDFKNTVLIMTSNLGSREIQEVSEDEKQVREAVTQVLQD
                     HFKPEFLNRIDDIVIFHRLSRDQISQIVDVQLERLRQMLHERTISIVLDDSAKELLAR
                     EGYDPNYGARPLKRAIQTLIQNPLAMKLLQGDIQPGQTVTVSAQDGELVFHTNKAAAA
                     A"
BASE COUNT          634 a          976 c          840 g          799 t
ORIGIN      
        1 gtccggcaga tgcagatttc ggatgtactt cggcgccatt tcgagcgccg tgttaatcgc
       61 ttcgtcggaa atctgaaccg agtagtttct ttccagacga ggccggacgc cgagcagaat
      121 ttcgcgcgtc tcgataatcg aaggctcgtc aacttttacc aaacggaacc gtcgcgccag
      181 cgcctcgtct tccgcgatgt actccttgta ctcagtcagc gtggtagcgc cgatgatccg
      241 gagttcgccc ttcgccagtg atgacttgaa catgttcgcg gcgtccgaag acgtgccgag
      301 tgcggcgccg gcgccgatga tcgtgtgcgc ttcgtcgatg aacagaatca gattgtcgcg
      361 ttctttgact tcgtcgatga tgcctttgat gcgctcttcg aacatgccgc gcagcatggt
      421 gccggccacg atgccgccca tctgcaattg cactacatgc gaattacgca agcgcgcggg
      481 aactctttcg ggttcaagct cgatcatccg cgcgaggcct tctatcaccg ctgtcttgcc
      541 tacgccgggc tcaccgacca gcatcggcga gttcgcacgt tcgcggtggc aaagaatctc
      601 gatgatttgc tgaatttctc tttcgcgccc gatcgtcggc gcgattttat cctggcgcgc
      661 catgcgattg agcgacacgc cgaagtgttt caagtacgcg ggcagctcaa acttcttccg
      721 gtattgttct tcctgacgct cgcgctcatc gacgttggtt ttgatgcgct cgacaaccag
      781 atcgggggtg gcgccaaggc cgcgcaggac ttccatcaaa agactgtcgt cctttgaaag
      841 cacgtcaaag atgtctgtcg attcgattgt tttgcgaccg cgcgagcgag cacgctccat
      901 cgcgcgcttg aaaagatcgg tcgtgtcagg cgcgattcgg aaacctttcc cgacgtgttg
      961 acgcgcgtta tcaaggcgcc gatcgattgc tccggtgacg gcatcgggat ccacggcgag
     1021 gctccgaata gttgagttaa aaagttccga ctcttccttc gcgagcgcgt gaatgatgtg
     1081 ttctacggtg atgtaatttt ggtcgcggcg tcgcgattcg cccagcgcct tttccagaac
     1141 ccgctgaccg ctatcgccga atttatcttt gtatgccccg agatcaacca tgctcgaaat
     1201 cctcgtttcc gaccccgcat gcttcaatcg cgccccgcaa tcaaagcatt gtttcgatgc
     1261 tgagagaata ttcgccgttg cgtttcagtg caacaggaat attcccgcca gagagcaggc
     1321 aattcgcctg ccaccatcag tttctcacaa agccgtcgtc gcgtgttgac cttatgccgc
     1381 ggcggcagcc ttgttcgtgt gaaagaccag ctccccatcc tgtgctgaaa ctgtcaccgt
     1441 ttggcccggc tggatgtctc cctgcaagag tttcatcgcc agcggattct ggatcagcgt
     1501 ctgaatagcg cgtttcagcg gccgcgcgcc gtaattcgga tcgtaacctt cgcgcgccag
     1561 cagttccttc gccgagtcat ccagcacgat cgaaatggta cgttcgtgca acatctgtcg
     1621 cagtcgttca agttgaacgt ccacaatttg actgatctga tctcgagata accggtgaaa
     1681 gatcactatg tcgtcaattc gattcaaaaa ttcaggtttg aagtgatctt gcaaaacctg
     1741 cgtcaccgcc tcacgcacct gcttctcgtc ctcgcttacc tcttgaatct cgcgcgagcc
     1801 gagattcgaa gtcatgatca gaactgtgtt cttgaaatca accgtgcggc ctttcgagtc
     1861 cgtcaatcgg ccatcatcca gaatctgaag caacacattg aatacgtccg aatgcgcctt
     1921 ttcgatctcg tcaaagagaa tcacggcgta gggccggcgc cgaacggctt ccgttagttg
     1981 accgccctcc tcgtacccga tataccccgg cggcgcgccg atcattctcg cgaccgcgtg
     2041 cttctccatg tactcagaca tgtcgaggcg caccatcgag cgctcatcgt caaaaagaaa
     2101 ctctgccagc gcgcgcgccg tttccgtttt gccgacgcca gtcggtccaa gaaaaatgaa
     2161 cgagccaacc ggccgattcg ggtcctgtaa gcccgcgcgt gcgcgtcgca cggcattagc
     2221 aaccgcttgg agcgcttcgt cctggccaat cacgcgctga cgcagccgtt cctccatgcc
     2281 caggagtttg tgcatctcgc cttcgagcat ttttgtaacc ggcacgccag tccatttcgc
     2341 gacgacttcg gcaacgtctt cttcgtcaac ttcttctttc agagtgacac cgtccaactg
     2401 gagtgtcccg agtttggctt gctcggcttc aagtttctgt tgcagttcag ggatttggcc
     2461 gtattgaatc tcggaagcac gccccaggtc gccgccgttc cgcgcctgat ccaactgcaa
     2521 ctttagttgt tcgagttcag ccttggcgcc gcggatgtgc tcgataatcg ctttctccga
     2581 ctgccattta gctttcatgc ccgaagattt ttccttaagg tcggcgatgc gttgttcaat
     2641 ctcgcgcagg cgcgcttttg aacggtcgtc ttcttcccgc tgtagtgcct gccgctcgat
     2701 ttcgagctgc atgatttcgc gttcaagctg atcgatctcc tgcggcaatg aatcgatctc
     2761 aatgcgcagt cgcgaagctg cttcgtcaat caagtcaatc gctttgtcgg gcagaaaacg
     2821 atcggtgatg tagcggttcg aaagcgtcgc agcagccaca atggccgaat ctttgatgcg
     2881 gacgccgtga tgaacttcgt agcgttcttt caagccgcgc agaatcgcga tcgtgtcttc
     2941 gactgtcggc tccccgacat agatttgctg gaaacggcgc tcgagcgcgg cgtccttttc
     3001 aatgtacttc ttgtattcgt tcagcgttgt cgcgcccaca cagcgcaact ctccacgcgc
     3061 caaagacggc ttcaacatgt tcgaagcgtc gattgcgcct tcggcagcgc cggcgccgac
     3121 cagcgtgtgc agctcatcaa taaacagaat gatctgacct tgcgcactct cgatctcctt
     3181 taagaccgcc ttcaatcgat cttcaaactc accgcggtac ttcgcgccgg caagcatcga
     3241 tccgagatc
//
LOCUS       DATDBY010000154         2717 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_499561, whole genome shotgun sequence.
ACCESSION   DATDBY010000154 DATDBY010000000
VERSION     DATDBY010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_499561"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2717)
                     /locus_tag="VIT19_03030"
     CDS             complement(<1..>2717)
                     /locus_tag="VIT19_03030"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007154 - cell communication [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Calx-beta domain-containing protein"
                     /protein_id="HEY5837981.1"
                     /translation="DITINNVSISEGDSGTKTVDFTVALSAANNFQIVTVNYATADGT
                     ASSPSDYQSTSGQLMFNPGEISKPVTITIVGDITLESNETFFVNLSNPVNAVILDGQG
                     QGTITEDEVAPTLSINDVSMDEGNGGTKIFQFTVSLSSPALTGGVTFDIATQDNSATV
                     ANGDYLANSLTSQTIPAGQQTYTFNVTVNGDGDIEPTETFFVNVTSISGATAGDTQGV
                     GTIQSDDSPVLSINDVSTTEGDTGTKIFTFTITSTMPAPAGGITFDITTQDGTAQDDN
                     PASEDNDYVANSTIGKTITAGTTSTTFAVTVNGDKLVEPNETFNVVISNASGGLAVIG
                     DDTGVGTIQNDDTPLLVISQLYPGGGLSGATFTNDFIEIFNGGVTTVDFSVTPYSVQF
                     LSTSGSTWAKTELLSGSIAPGRYFLIQGTSGANGAALPTPDATGSLNLTSTTPGKVAL
                     VGGTTLLTGNCPGDDTFPPFNPANGTISDFVGYGGTAATTNHCYEGPGPAAFTSGSNT
                     TADFRKFGGCQDTNDNAADFLTATPGPRNSSSPANDCTAADVSITKTDAPDPVVTGSN
                     VTYTITVTNNGPAIANSVVVTDNLPGNVTFVSCASTGAGVCAGSGNNRSITFTSLAAG
                     ASETITLVATANGPAGTPISNTATVSSTTTDSISANNSATATTAVVNPTFANLSIVKT
                     DSPDPVFPTGTLTYTLTVTNNGPDTAQSVVVTDTLSSNVTFVDCASNQGGVCGGTATS
                     PTIIFASLANGVTATITIHVTVNSNVTEGTVISNTASVTSATADSTLGNNSDSEDTTV
                     QEVDPGELLISEFRTRGPVSASDEFVEIYNPTTTTLTIGGLKIRASNGTGTISDRVTI
                     PPGTTLGSGCHYLIANNTASTGYSGTTSPNQTYTSGITNDGGIAITRAN"
BASE COUNT          546 a          711 c          810 g          650 t
ORIGIN      
        1 gttcgcgcgg gtaatggcga tgccgccgtc attggtaata ccgctggtgt acgtttgatt
       61 cggactagtt gtgccgctgt aacccgtgct ggcggtgttg ttggcaatca aatagtggca
      121 gcctgacccg agcgtagtgc ctgggggtat ggtcacgcgg tcgctgatgg ttcccgtgcc
      181 attggatgct cgaatcttca atccgccgat tgtgagtgtc gtagttgtcg gattgtagat
      241 ttcaacgaac tcgtccgaag cgctcactgg cccgcgagta cgaaactcgc taatcaacaa
      301 ttcaccggga tccacttcct gcaccgtggt gtcttcggaa tcggaattat ttcccagcgt
      361 tgaatccgcg gttgcagaag ttaccgacgc ggtattgctg ataaccgtcc cctcagtaac
      421 gttgctgttg acggtgacat gaatcgttat ggtcgccgtt actccgttcg ccagcgaagc
      481 gaatatgatc gtcgggctgg tcgccgtgcc gccacagacg ccgccctgat ttgacgcaca
      541 gtcaacaaaa gtaacattgg atgagagcgt gtcggttacg accactgact gcgcggtgtc
      601 ggggccgttg ttcgtcacag tgagcgtgta ggtcagcgtc ccggtcggga agacaggatc
      661 gggcgaatct gtcttcacga ttgaaagatt ggcgaaggtc gggttaacga cggcagttgt
      721 ggcggtggcc gagttgttag ctgatatcga atcagtcgta gtcgaactca ccgttgcggt
      781 attgctgatc ggagttcccg ccgggccatt ggccgtcgcc acgagggtga tcgtctccga
      841 tgcgccggcg gccagggatg taaacgttat cgagcgattg ttgccgctgc ctgcgcaaac
      901 gcctgcgccc gtcgatgcgc aagatacgaa ggtgacgttg ccgggaagat tgtcagtcac
      961 caccaccgaa ttcgcgattg ccggcccatt gttggtaacg gtgatcgtgt acgtaacgtt
     1021 cgagccggtt acgaccggat ccggtgcatc ggtcttggtg atcgacacat cggcggcggt
     1081 gcaatcgttc gccggagaac tgctgtttcg tgggcctggc gtagcagtca ggaaatcagc
     1141 cgcattgtca ttggtatcct ggcagccacc gaattttcta aaatctgcgg tggtgttgct
     1201 accagatgtg aaagccgcgg gcccgggccc ttcgtagcag tgatttgtgg tagctgctgt
     1261 gccgccgtag ccaacgaaat cggaaatcgt gccgttagcc ggattgaagg gcggaaaagt
     1321 gtcgtcccca ggacaattcc cagtaaggag cgttgttcca cctacaagtg cgaccttgcc
     1381 aggcgtcgtg ctggttagat ttaaagatcc cgtggcatca ggcgtcggca acgcagcgcc
     1441 gttggcaccg gaagtcccct gaatcaggaa atatcgaccc ggcgcgatac tccccgaaag
     1501 aagctccgtc ttcgcccacg ttgaacctga agtactcaag aactgaaccg agtagggagt
     1561 gacggagaag tctactgtgg taactccgcc gttgaagatc tcgatgaagt cattcgtgaa
     1621 agtcgctcca ctgaggccgc caccgggata gagctgactg atcaccagca gcggcgtgtc
     1681 atcattctga atcgtgccga cgccggtatc gtcgccaatc acagccaggc ctccggaggc
     1741 attcgaaatc accacgttaa aggtctcatt cggctcgacc agcttgtcgc cgtttacggt
     1801 cacggcaaag gtagtcgaag ttgttccggc cgtgattgtc ttgccgatgg tgctgttggc
     1861 tacgtaatcg ttgtcttcac ttgccgggtt gtcgtcctga gcggtcccgt cctgcgtggt
     1921 gatatcgaaa gtgatgccgc cggccggggc aggcatggtt gaagtaatag tgaaagtaaa
     1981 tatcttcgtg ccggtatcgc cctcagtcgt tgagacatca ttgatgctga gcacgggact
     2041 gtcgtcactc tggatggtcc ctacaccctg agtgtcgccc gccgtcgcgc cagagatgct
     2101 cgtgacgttc acaaagaatg tttcggtcgg ctcgatgtct ccatcgccat tgactgtcac
     2161 attaaacgta taagtttgct gccccgccgg aatcgtttga ctggtcaggc tgttggccag
     2221 gtagtctccg tttgcgacgg tggcggaatt gtcctgggtc gcgatatcaa acgtgacgcc
     2281 tcctgtaagt gcgggcgatg acaagctgac cgtaaactgg aaaatctttg tgccgccgtt
     2341 gccttcgtcc atcgacacgt cgttgatcga tagcgtgggc gccacctcgt cctcggtaat
     2401 cgttccctgg ccctgtccgt caagaatcac tgcgttaacc gggttgctga gattcacaaa
     2461 gaaggtctca ttagactcga gcgtaatgtc tccgacgatc gtgattgtta ccggcttgct
     2521 gatctcgccc gggttgaaca tcaactggcc gctggttgac tgataatcgg aaggagaact
     2581 cgcagtgccg tcggcagtgg catagttaac ggtgactatt tggaaattgt tagccgcaga
     2641 aagcgcgacg gtgaaatcga cagttttcgt gccactgtcc ccctcggaaa tcgagacgtt
     2701 atttatggtg atgtcgg
//
LOCUS       DATDBY010000155         4383 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2139893, whole genome shotgun sequence.
ACCESSION   DATDBY010000155 DATDBY010000000
VERSION     DATDBY010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4383
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2139893"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..904
                     /locus_tag="VIT19_03035"
     CDS             <1..904
                     /locus_tag="VIT19_03035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837982.1"
                     /translation="EKISPLFCDVSWPSVMKDSHYSTGVFIDKKQINGVNRRAFASSI
                     RSPDMKARSSIYAGIALILLVACVMACKPTSNSTSSTQPANSSTNSSTATSSPADTTA
                     PATTANIAGKYNVTGTNPNSAPYRGTLEVIPHGDVYQFRWVAGRQYDGVGVVNGDVVA
                     VAFADGPNGKGCGVINYVIRGDGSLLGRWGNWGTDEAGNESATRTSGSDLVGDYEATG
                     KNPNGTSYKVQLKVEPAGNVHRFVWSNNTDGVGIKRGNHVAVGIGGARCGFVAYEIKP
                     DGTLDGVWGGYGSDQTGTETAAKQ"
     gene            complement(978..2321)
                     /locus_tag="VIT19_03040"
     CDS             complement(978..2321)
                     /locus_tag="VIT19_03040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837983.1"
                     /translation="MTFSKPNMWIAAAVIVVPSAFYLAWRSLSVESPDTLRTTIESLK
                     YLSIIVGSASGLVGATTQTKDQKTGRPNAAGKLLIGIIAGSLFIGLTSQAVESTLKKI
                     QEDAARKAAEVQRGKLDDLVGKAQDSSNKLNDLVGKAEKSVSEIKDLGEKQNAALAVT
                     NSIVEGVKTVSGDVRTVSSDTRAVSENVLETFDLTRRGSKPFVPAKIFMRITYEYSTT
                     SQEIRDFVDLVRESVNHLEAHRDDPRWKDNEKYNWGLPKADSIWLVGPSFLARLGETR
                     VRRLLIQDVVMMRIRPAEKFTSRPIGKQVELIGYASFKRNQPERIGSSVKVPDPSNLI
                     IQINRTTGNIIQTFTMDKVDVRGNAGIHSLYDLPEMVLEIHLLASPNDRPKLECFTYQ
                     NDTLKTSGRLRDWITLESRRFEGPRSQAPLFIYAFKENDLTTTRNCKEQAQSVTP"
     gene            complement(2438..3532)
                     /locus_tag="VIT19_03045"
     CDS             complement(2438..3532)
                     /locus_tag="VIT19_03045"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY5837984.1"
                     /translation="MKDVVRIGIIGAGFARTTQIPGFKNCEGAQIVAIASAHRERAEE
                     VAREFDIPNVEDDWRGVVAREDVDLVSIVTPVVTHCEMTLAALDAGKAVLCEKPMAMN
                     ADEARRMMERAKEKGVLALIDHELRFLPGRIKTRELVHRGDIGQVKHVQVIFRSDSRA
                     NVDRSWNWWSDVKQGGGALGAIGSHVVDSCRWTLGTEVSEVFCNLATHVRERKDDHGK
                     LRVVTTDDEAHLLLRFQDGGITEAATGNASMSLVEAGAPQNEIECFGSSGALGVGELG
                     AIRQARVGEGGWVIVDKDPGELAAGMTDSGWSRGFTAFAKEIVAALREGRTTVAGAAT
                     FADGYRTQLVLDAARRANQSGCWETLNDAP"
     gene            3673..>4383
                     /locus_tag="VIT19_03050"
     CDS             3673..>4383
                     /locus_tag="VIT19_03050"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HEY5837985.1"
                     /translation="MYDETLGIIIVLFVLALLVVMVVLPIISIIVSVRTRNKLNQTVS
                     RNESVPSPGASPAPKLLMDAVQQLTVRVARLEAAMEIAPLGAPPKPAEERPPETVTPQ
                     QPTPVPPATPIAQAPPPIAPPPSYAPASTTRTIHAADVESIIGRRWLGWAAIALILFA
                     AVFFLKYAFDNRWIGELGRCAIGVAAGITLTALGYRYHKRGWRVFSQILTAGGIVLLY
                     LSAYASFAFYQLAPQRAAF"
BASE COUNT          940 a         1281 c         1147 g         1015 t
ORIGIN      
        1 cgaaaagatc tctccgctgt tttgcgatgt ttcctggcca tcagtgatga aggacagcca
       61 ctatagcact ggagttttca ttgacaagaa acagattaac ggcgtaaata ggcgcgcctt
      121 tgcatccagt atcaggagtc ctgacatgaa agctcgctca tcaatctacg ccggcattgc
      181 gctcatcctg cttgtcgcct gtgtcatggc gtgtaagcca accagcaact cgaccagcag
      241 cactcaaccg gcgaactcaa gcacaaatag ctcgacggca acgtcttctc ccgcagacac
      301 caccgcgccg gcgacgaccg caaacattgc cggcaagtac aacgttaccg gcacgaatcc
      361 gaatagcgcg ccctatcgcg gcacgttgga agttattccg cacggcgacg tttatcaatt
      421 tcgctgggtc gccggccgcc aatacgacgg cgtgggcgtc gtcaatggag atgtcgtcgc
      481 ggtcgcgttc gccgacggac caaacggtaa aggatgtggc gtcatcaact acgtaatccg
      541 tggcgatggc tcgctgctgg ggcgttgggg taactgggga acggacgaag cgggaaatga
      601 gagcgccacg cgcaccagcg gttcagacct ggttggcgac tacgaagcaa ccgggaagaa
      661 cccaaatggc acgtcctaca aagtacagct caaggtcgaa ccggcgggaa atgttcatcg
      721 cttcgtctgg agcaacaaca cggatggcgt cggcattaaa cgcggcaatc atgtcgcagt
      781 cggcatcggc ggcgcgcgct gcgggttcgt cgcttatgag attaagccgg atggaacgct
      841 cgatggcgtg tggggtggtt acggcagcga tcagaccgga actgagacgg cggcgaaaca
      901 gtaaggtcag aaccgcctgc ggtagggggc ggtgggcgtt agcttattgc cagcgaatcg
      961 cagctggtcc gcgaactcta cggagttacc gattgagctt gctctttaca gttgcgagtg
     1021 gttgttaggt cgttctcctt aaacgcgtag atgaaaagag gggcttgact ccttggccct
     1081 tcgaaccttc gggactcgag tgttatccaa tcgcgcagtc ttccagatgt cttcagagtg
     1141 tcgttttggt atgtgaagca ctcgagcttt ggccgatcgt tgggagaggc caacaggtgt
     1201 atctcgagta ccatttcagg aaggtcatag agactgtgga taccggcatt accccggacg
     1261 tcgactttgt ccatggtgaa cgtttgaatg atattgcccg tcgtacgatt aatctgaatt
     1321 atcaggttag aaggatccgg gacttttacg ctagaaccga tgcgttcggg ttgattccgt
     1381 ttaaaactgg cgtaaccgat taactcaacc tgtttgccga tcggcctgga agtaaatttc
     1441 tctgcggggc ggatcctcat catgacaaca tcctgaatca aaagtcgccg cactcgagtt
     1501 tcacctaacc tcgcgagaaa actggggcca actagccaga ttgagtcagc cttaggaaga
     1561 ccccagttat acttttcgtt atccttccaa cgcggatcat cacggtgagc ttcgaggtgg
     1621 tttacacttt ctctcaccag atcaacgaag tctctaattt cctggctggt ggttgaatat
     1681 tcgtaagtga tgcgcatgaa aatttttgcg ggaacaaacg gtttcgatcc acggcgcgtt
     1741 agatcgaagg tttccaggac attttcactt acggcccggg tgtcgctact tactgttctt
     1801 acatcaccgc tgacagtctt gactccttca acaatggaat tagtaactgc caacgctgcg
     1861 ttttgttttt ctccaaggtc tttaatctcc gatacagatt tttcggcttt ccccaccagg
     1921 tcgttcaatt tattgctgga gtcctgcgcc tttccaacga gatcatcgag cttcccgcgc
     1981 tgcacttcag ccgcctttct ggctgcatcc tcctgtatct tcttgagcgt tgactcgact
     2041 gcctgagacg taaggccgat gaataaacta ccggcgataa tgcctatgag taacttgccc
     2101 gcggcattgg gcctcccggt cttttgatct tttgtctgcg tcgttgcgcc aacaagaccg
     2161 gacgcgctgc cgacaatgat cgacagatat ttcagacttt caatagtggt acgcagtgta
     2221 tcgggagatt caacggatag agatcgccag gcgagataga acgccgaggg cacaacaatc
     2281 accgccgctg cgatccacat atttggtttt gagaacgtca taaggaaact tagttggaga
     2341 cgtttccagg gtcaggatga acgcgaattt atcatgcacc ccgacgttta ggtaaaaatt
     2401 aaacgttgct cagatggttt tatctaaaga ccacgcgtta cggcgcgtcg ttcaacgtct
     2461 cccagcaacc actctgattc gctcgccgag cagcatcgag aaccagctgc gtccgatagc
     2521 catctgcaaa ggtcgcggcg cctgcgactg tagttcgccc ctcgcgcagc gcggcgacaa
     2581 tctctttagc gaaggccgta aacccgcgcg accagcctga gtcagtcatc cccgccgcca
     2641 gttcacccgg gtccttatcg acaatcaccc agccaccttc gcccactctc gcctgccgta
     2701 tcgcgccgag ttcgccgacc ccaagcgcgc cgctgctgcc aaaacattca atttcgtttt
     2761 gaggcgcgcc ggcttcaacc agcgacatcg aagcgttgcc agtggccgct tccgttatcc
     2821 cgccgtcctg gaaccggagg agtaaatgag cttcatcgtc agtcgttacg acgcgcaact
     2881 ttccgtggtc gtctttccgc tcacgcacgt gcgtcgcgag attacaaaac acttccgaca
     2941 cttcagtgcc gagcgtccag cgacaactgt caaccacatg cgaaccaatt gcacccagcg
     3001 ccccaccgcc ctgcttaaca tccgaccacc agttccacga ccgatcgacg ttcgcgcgcg
     3061 agtctgaccg aaagatcacc tgcacgtgtt tcacctgccc gatgtcacca cggtgcacca
     3121 attcacgcgt tttgattcgc ccgggtagaa atctgagttc gtgatcgatc agcgccagca
     3181 cgcctttctc ttttgcgcgt tccatcatgc gtcgcgcttc atcggcattc atcgccatcg
     3241 gtttctcgca tagcaccgct ttgccggcat ccagcgcggc cagcgtcatt tcacagtgcg
     3301 tcacgaccgg cgtcacgatg ctgacgagat cgacgtcttc acgcgcaacc acgccgcgcc
     3361 aatcatcctc aacgttcggg atatcgaatt cgcgcgcgac ttcttcggcg cgctcgcggt
     3421 gcgcgctggc gatcgcgaca atctgcgcgc cttcacagtt tttgaaaccg ggaatctgcg
     3481 tggtgcgcgc gaagccggcg ccaatgattc caatgcgaac aacgtctttc atacgtggat
     3541 tgtgacgtcg cagtatctca ccagaatcag gcgcccgtct aagttaattg acttgcctca
     3601 gatgcaaaaa tagaatgcgc gcgattttag agcattcgat ctttcgcttc tctgaccgcc
     3661 cgcgcgatag ttatgtacga cgaaaccctg ggaattatca tcgtcctttt tgttctggcg
     3721 ttgctggtgg tgatggtcgt tctcccgatc atttcgataa tcgtctctgt ccgcacccga
     3781 aacaaactca atcagacggt ctcacgaaac gaatctgttc cgtcaccggg cgccagtccg
     3841 gcgccgaagt tgttgatgga tgccgttcag caactgaccg tccgcgtcgc acggctggaa
     3901 gctgcgatgg aaatcgcgcc acttggcgcc ccgcccaaac ccgcggaaga acgccccccg
     3961 gaaacagtaa cgcctcaaca accgactcca gttccgccgg cgacgccaat cgctcaggct
     4021 ccaccaccta ttgcgccgcc accctcgtac gccccggcat caaccacccg caccattcat
     4081 gccgccgacg ttgaatcgat catcggccgg cgctggctgg gttgggcggc gattgcgtta
     4141 atactttttg cggctgtgtt ttttctgaaa tacgcattcg acaatcgctg gattggcgag
     4201 ctgggtcggt gcgcgatcgg ggtcgccgcc ggtataaccc taaccgcgct tggatatcgc
     4261 tatcacaaac gagggtggcg agtcttctcg cagattctca ccgccggcgg catcgttttg
     4321 ctttatctgt ctgcgtacgc gtcgttcgcg ttttatcagc tggcgccgca acgtgccgcg
     4381 ttc
//
LOCUS       DATDBY010000156         2073 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1114691, whole genome shotgun sequence.
ACCESSION   DATDBY010000156 DATDBY010000000
VERSION     DATDBY010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1114691"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="VIT19_03055"
     CDS             complement(<1..914)
                     /locus_tag="VIT19_03055"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEY5837986.1"
                     /translation="MDQAREESERRFEAFMGHLPGYAWIKDPGGKYLYINEPLQTVLP
                     VYKNDWRGRTDEELWPANAIEFRGNDLRALQERRKLQTIESWFYRGQLRWLLVSKFPI
                     FDDGNGMLLGGIAIDITEHRHAELSRDKAEERFREIFENAREGIFQSTPEGQYLVANP
                     ALARMHGYESPEALIAGCQDISHQIYADPLRREEFKLLLETAGVVTDFEMKTRQKDGS
                     NLWVSVNARAVRDAEGMILYYEGTSQNITDRKRAQEKSAAFATLARKLSGASTQLTAA
                     RIIAQTARDLFGWDACNLDLYDAERDWV"
     gene            1489..>2073
                     /locus_tag="VIT19_03060"
     CDS             1489..>2073
                     /locus_tag="VIT19_03060"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5837987.1"
                     /translation="MQEIEKTNVMPVPADLSGDNRILIVDDEELVRNLFALSLGDRYD
                     CMTAANAQEALALLAVQPFALVITDVHMPGLSGIELLRKIVADFADVAVIVASGVDRS
                     QRVIDTLRLGASDYLIKPCELDVLEVSVVRALERRALIRDGKRYKAALEVRNEELASQ
                     KTELIRLQAQLIQSAKMASLGQLAGGVAHELNNPC"
BASE COUNT          440 a          572 c          558 g          503 t
ORIGIN      
        1 aacacccaat cgcgctcagc gtcgtacaga tcgagattac aggcgtccca accaaataga
       61 tctctagccg tttgggcaat tattcgggcc gccgtcagtt gcgttgaggc tccgcttagt
      121 ttccgcgcca gcgttgcaaa agctgcgctc ttttcctggg cgcgtttacg atcggtgatg
      181 ttctgactag taccctcgta atacaagatc attccttcgg cgtcacggac tgcccgagcg
      241 ttgacggaaa cccagagatt cgatccgtcc ttctgccgcg tcttcatctc aaaatctgtc
      301 accacgccgg cggtttccag caggagcttg aactcttccc gccgcagggg atcagcgtaa
      361 atctggtgag aaatgtcctg gcagccggcg attaatgcct ccggagattc gtagccatgc
      421 attcgggcca gcgccgggtt ggccacaaga tactggcctt ccggcgttga ttgaaaaatt
      481 ccttcacgcg cattttcgaa aatctcgcga aatctctctt cggccttgtc gcggctgagc
      541 tccgcatgcc tgtgttcagt gatgtcgatc gcaatgccgc cgagcagcat cccgttgcca
      601 tcatcgaaga ttggaaactt gcttactaac aaccaccgta gctgccctcg gtaaaaccag
      661 ctctcgattg tttggagctt gcgtctctct tgaagagcac gtaaatcgtt gccgcgaaac
      721 tcgatcgcgt tcgccggcca aagctcctca tcagtgcggc cgcgccagtc gtttttgtat
      781 accggcagca ccgtttgcag cggctcgttg atatacaagt atttgccgcc gggatctttt
      841 atccaggcgt agccgggcaa atgacccatg aaggcctcga atcggcgttc actttcttcg
      901 cgggcctgat ccatgcaaca acccgcagca acctgctgag gtacagaaag gttcaatttg
      961 ttttccttgg ccatcctgaa ttaaacaagc tgctacccgc agcgatgtct ccgttctttc
     1021 tgtttttcct actcaataag agtcgggatc ttagacgtta tttaacatcc caagagctcc
     1081 ccctggtgtc cggtaaaatc cgcatacata accgttcaag atctttgcgg acacgtcatt
     1141 attctgcgcg tggacgcaga catttgcggt ggcgcgattg cgcgcgttta ttgaattagc
     1201 aaaaggctag cgatagtaga tgcgaaggaa cacggggcga cggtgcctaa ctacgctcta
     1261 acactctggg tcgcgccttc tatgtgggtc ggattttagt gccggagccg gccattgcgc
     1321 aaggccgagt tgcctcacac gcagattgat ggaacgcgct ttgctccttg atcggtttgc
     1381 cctcaggtga ccccattggg tggctaactg gggcgatcca cctcgggaat gattccgtga
     1441 tcgcggaaaa ctgacccggc ccgaaccttc caaacgtcca tctgattcat gcaggaaatc
     1501 gaaaaaacta atgtaatgcc ggtgccggct gacctgtcag gtgacaatcg aattcttatc
     1561 gtcgacgacg aagagctcgt gcgcaattta ttcgcgctgt cactcggcga tcgttacgat
     1621 tgcatgactg cggcgaacgc gcaggaagct ttggctctgc tcgctgttca gcctttcgcg
     1681 ctggtaataa ccgatgtgca catgcccggg cttagcggta tcgagctgtt gcgcaagatc
     1741 gttgccgatt ttgccgatgt ggcggtaatc gtcgctagcg gggtggatcg cagccagcgg
     1801 gttattgata cgttgcgctt aggcgcctcg gactatttga tcaagccctg cgaactagac
     1861 gttttggaag tgagcgtcgt gcgcgccctg gaacggcggg ctttgattcg ggacggcaag
     1921 cgctacaagg cagccctgga agtacgcaat gaagagctcg cctcgcaaaa aacagaactg
     1981 atacgtttac aggcgcaatt aattcaaagc gcaaagatgg cctcgctggg tcagctggcg
     2041 ggcggcgttg cgcacgagtt gaataatcct tgc
//
LOCUS       DATDBY010000157         3893 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1720846, whole genome shotgun sequence.
ACCESSION   DATDBY010000157 DATDBY010000000
VERSION     DATDBY010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3893
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1720846"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1187
                     /locus_tag="VIT19_03065"
     CDS             <1..1187
                     /locus_tag="VIT19_03065"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5837988.1"
                     /translation="LNGMENLTTAGLIDIGNAHLLRGNFTQADNYFNQALRLAQLYKG
                     RRNEARASIMLASLRSQQSRPDEVPTYIQTALAYYEQGGHRKETSQAYVILGRAYDEI
                     GNYDAAEKAFQQQLESAKVVGDQEQIGLAQEGLGAVAAHRENYPAALAHYDEKYKISS
                     SLNKRSSIGYAAVARGVMLTQLGRADEARAVLSEALTIAENQGKDPYKELLAVVHLAN
                     AEVSMTERKFAAAIKEGDIALSLAGSDFKSVAVRGKSVVGLARTLSGQTAAGKKQCED
                     AVTEARSLKDPYQLSQTLLALAESALIAGDATGASNAASEAQQRFATANQHESEWRAA
                     LIAGLATEKTGDKAKARDLASRAKSILTGLEQAWGSDSYARYLKRADVAELYAKLNAL
                     IS"
     gene            complement(1184..1780)
                     /locus_tag="VIT19_03070"
     CDS             complement(1184..1780)
                     /locus_tag="VIT19_03070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837989.1"
                     /translation="MKKTSRRDFGKQLGLTLGALPIAALATETVAGQKKRKFTGDPIT
                     VGGGGGNLRRRGQKVTPPPEPVYADFNENIYKPVGNGSQKTFKNTNGTARMSYLVVVI
                     NNDTFNLTPLLPRATGECRIELSAPGRNNNIEVWGDRPVRIRFDLDNYGKSRGGYRSK
                     DPGNFIEKIAVETPLGKFERARLTAADKITILTDTVSS"
     gene            complement(1835..2290)
                     /locus_tag="VIT19_03075"
     CDS             complement(1835..2290)
                     /locus_tag="VIT19_03075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837990.1"
                     /translation="MGEPITVGGGGGSAFRNEPVFCDFEESASAYSDQTAGSGRKHRT
                     YANTTFIAKTLKVILAGETVDFSSLLPADGECKVEVKCPGSDDDVTITGKPLGIKLHT
                     GTYSDPVSGSTNPHRRTGNSHSNEIEINLANQTIKIQARGHFEVIVEEE"
     gene            complement(2412..2972)
                     /gene="mug"
                     /locus_tag="VIT19_03080"
     CDS             complement(2412..2972)
                     /gene="mug"
                     /locus_tag="VIT19_03080"
                     /EC_number="3.2.2.28"
                     /inference="COORDINATES: protein motif:HMM:NF007570.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000700 - mismatch base pair DNA
                     N-glycosylase activity [Evidence IEA];
                     GO_process: GO:0006285 - base-excision repair, AP site
                     formation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="G/U mismatch-specific DNA glycosylase"
                     /protein_id="HEY5837991.1"
                     /translation="MAVTKPFKPTKQQLVEAAGKKVPDVIAPNLKVLFCGINPGLYTA
                     AVGHHFARPGNRFWPALFKSGFTDRLVSPSEESELLARGIGISNVVPHATATAAELTK
                     EDFIAGGRALAAKVKRYRPRVLAILGVGAYRDAFAKPKAQIGEQPERIHDARIWVLPN
                     PSGLNANYQLPQLVKLFSELRAAIKD"
     gene            3015..>3893
                     /gene="ligD"
                     /locus_tag="VIT19_03085"
     CDS             3015..>3893
                     /gene="ligD"
                     /locus_tag="VIT19_03085"
                     /inference="COORDINATES: protein motif:HMM:TIGR02779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HEY5837992.1"
                     /translation="MPARKSSKKSRDAALCSAARKARMPEIIHPMLATLVDEPFSDPD
                     WIFETKWDGFRSVCFVSKGNARFVSRNQIEMTPQYPELANIPKQIDAKEAILDGEIVA
                     LDEDGRPQFQLLQNKLRIRSGSYAKARTAQLVYFAFDLLHLDGYDLMGCPVVERKARL
                     EQILRPASFIKYSDHVEGEGEAFFHEIAKFRLEGMIAKRAASKYAQKRTSDWLKVKTV
                     QRSEVVIGGYTQPRGARSYFGSLVMGLYREGKLHYVAHVGGGFNEQKLREIHKLLQPL
                     KTDKCPFAVKPKTNEPV"
BASE COUNT          883 a         1049 c         1079 g          882 t
ORIGIN      
        1 aattgaacgg catggagaac ctgacaacgg ccgggttaat tgatatcggc aacgcccacc
       61 tgttgcgcgg caacttcacc caggccgaca actatttcaa tcaggcattg cgattggcgc
      121 aactttacaa aggaagacga aacgaagcgc gcgcttccat catgcttgcc agcctgcggt
      181 cgcaacagag ccggcctgac gaggttccga cgtacatcca aactgcgctc gcatactatg
      241 agcagggcgg ccatcggaaa gaaacctcac aagcgtatgt gattcttggt cgcgcctatg
      301 acgagatcgg aaattacgat gccgccgaga aagccttcca gcaacaactc gagtctgcga
      361 aagtggtagg tgatcaggag cagatcggcc tggctcagga gggcctggga gcggtagcag
      421 cgcatcgaga gaattatccc gcggcgctcg cgcactatga cgagaaatac aaaatcagta
      481 gctcgctcaa caagagatca agtatcgggt atgcagcggt cgcgcgcggt gtgatgctta
      541 ctcaactggg acgcgccgat gaggcgcgtg cggttctgag tgaagcgctt acaatcgcgg
      601 aaaaccaggg caaagatccg tacaaagaac tacttgcggt tgttcatctt gcgaacgccg
      661 aagtttccat gaccgagcgg aaattcgctg ccgcaatcaa ggaaggcgac atcgctttgt
      721 cactagcggg aagcgatttc aagtcagtcg cggtgcgagg aaaatccgtt gtcggactcg
      781 cgcggacttt gtctggtcag actgcggccg gtaaaaagca atgtgaagat gccgtcacgg
      841 aagctcgctc tctgaaggat ccgtatcagt tgtcgcaaac cttgctggcg ttggcagaat
      901 cggcgttgat cgccggagat gcaaccggag catcgaacgc cgcgtccgag gcgcagcaaa
      961 gattcgccac agccaatcaa catgagtctg aatggcgagc cgcgttgatc gccggattgg
     1021 ctactgagaa gacgggagac aaagcaaagg ctcgcgacct tgcatcgcga gccaaatcaa
     1081 ttctgacggg acttgagcaa gcctggggaa gtgattctta cgcccgttat ctcaagcggg
     1141 ctgatgtggc cgagctttat gcaaagctca acgctttgat ttcttaagat gaaaccgtgt
     1201 ccgtaagaat cgtaatcttg tcagctgccg tgagtctcgc tctttcaaac ttccccaggg
     1261 gagtttccac cgcgatcttt tctatgaaat tgcctggatc tttgctccta tagccaccgc
     1321 gcgactttcc gtagttgtcg agatcaaacc tgatccgcac aggccgatcg ccccacactt
     1381 caatgttgtt gtttctaccg ggagcgctca actcgatgcg acattcgcca gtagcgcgcg
     1441 gcaataatgg cgttaagtta aaagtgtcgt tgtttatcac aacaaccaaa tagctcatgc
     1501 gggctgtgcc atttgtattt ttgaacgtct tctggctgcc attgccaaca ggcttataga
     1561 tgttttcgtt gaaatccgca tacaccggct cgggtggcgg ggtaactttt tggccgcgac
     1621 gcctcagatt gccgccgccg ccgccgaccg tgatcgggtc gccggtgaat tttcgcttct
     1681 tttgaccggc caccgtctca gtcgccaaag ctgcgattgg taacgctccc agcgtcaaac
     1741 caagttgctt tccaaagtct cggcgtgaag tcttcttcat cagagtctcc ttttgtgtga
     1801 tctcagcgac aacaatcacg cgttgtggtc agctctactc ttcttcaacg atgacctcga
     1861 aatggccccg cgcttgaatc ttaatggttt gattcgctag gttgatctct atctcgttag
     1921 agtggctgtt gccggttcgc cgatgtgggt tcgtcgaacc tgagacggga tccgagtacg
     1981 tgccagtgtg taacttgata cccaaaggct tgccagtgat ggttacatca tcgtcgctgc
     2041 ccggacactt aacttcgacc ttgcactcgc cgtcggccgg cagtagcgac gagaagtcca
     2101 cggtctctcc cgcgagtatt accttcagtg tctttgctat gaaggtggtg tttgcgtagg
     2161 ttcgatgttt tcgcccggaa ccagcggttt ggtcagaata cgctgaagct gattcttcaa
     2221 agtcacagaa caccggctcg ttgcggaacg cactaccacc gccgccgccg accgtaattg
     2281 gctcacccat cgcattgctc ctgtagattg agttggtaag gcaggcgcag actatttgaa
     2341 accgggcgag atgtaaagca ctttacgatc cctggatgga agacttcggc cgctagcgcc
     2401 ggccgcgcaa atcaatcctt gatcgccgca cgcagctcac taaacagctt caccagttgc
     2461 ggtaattgat agttggcatt cagaccgctt ggattcggca aaacccagat ccgcgcgtcg
     2521 tgaattcttt cgggctgctc gccgatctga gctttgggtt tcgcgaacgc gtcgcggtac
     2581 gcgccgacgc cgagaatcgc caggacccgc ggacgatatc gttttacctt cgcggctaat
     2641 gcgcggccgc cggcaatgaa atcttctttg gtcagttcgg ccgccgtggc tgtcgcgtgc
     2701 ggtacgacgt tgctaattcc gattccgcga gcaagcaact cgctctcttc agacggcgag
     2761 accaaacgat ccgtgaagcc cgatttgaat agcgccggcc agaaccggtt gccgggccgc
     2821 gcgaagtgat gaccgaccgc ggctgtgtag agccccggat ttattccgca aaacagcact
     2881 tttagatttg gcgcgatcac atccgggact ttcttgccgg ccgcttcgac cagttgctgt
     2941 ttggttggct tgaacggttt ggtgaccgcc atggttggct cttagactaa cacgcagact
     3001 tcatcgtcga cgttatgcct gccagaaaat ccagcaagaa aagtcgggac gcggctctct
     3061 gctcagccgc gcgcaaggca cgcatgccgg aaatcattca tccgatgctg gcgacgcttg
     3121 tggatgagcc attctctgat ccggattgga ttttcgaaac gaagtgggat gggtttcgat
     3181 ccgtctgctt cgtgagcaag ggaaacgcgc gattcgtttc gcgcaatcag atcgagatga
     3241 ccccgcagta tcccgaactt gcaaacatac cgaaacagat cgatgcaaaa gaagcgattc
     3301 tcgatggtga gatagtcgcg ctcgacgaag acggacggcc acagtttcaa ttgcttcaga
     3361 acaagctccg aatacggagt ggcagttatg ctaaagcgcg gactgcgcag cttgtctatt
     3421 tcgcgttcga cctgctgcat ctcgatggct acgatctgat gggttgcccg gtcgttgagc
     3481 ggaaagccag gctcgagcag atcctgcgtc cggcgagctt tataaaatat tccgaccacg
     3541 ttgaaggcga aggcgaagct ttctttcacg agatcgcaaa gtttcgtctg gaaggcatga
     3601 tcgcaaaacg cgctgccagt aagtacgcgc agaagcgcac gtcagactgg ctcaaagtaa
     3661 agacagttca acgatcggaa gtcgtcatcg gcggctacac gcaacctcgt ggcgcgcgtt
     3721 cgtatttcgg ttcgctggtg atgggactat atcgtgaggg caaacttcac tatgtggctc
     3781 atgtgggggg cggattcaac gaacagaagc tccgcgagat tcataaactc cttcagccgc
     3841 tcaagactga taagtgtccg ttcgcggtca agccgaagac aaacgaaccc gtg
//
LOCUS       DATDBY010000158         4251 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_60634, whole genome shotgun sequence.
ACCESSION   DATDBY010000158 DATDBY010000000
VERSION     DATDBY010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4251
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60634"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2328)
                     /locus_tag="VIT19_03090"
     CDS             complement(<1..2328)
                     /locus_tag="VIT19_03090"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY5837993.1"
                     /translation="MIGQTISHYRVIEKIGEGGMGVVYVAEDTVLGRRVAIKTLTIKP
                     GQNEQHFRTRFLREARAVSALSHPHIATIHDYGETKEGVPYIVMELVKGQTLADLLKA
                     DSLTIARALVIIQQVAAALGEAHRNGVVHRDIKPSNVAVDHRGDVKVLDFGLAKQLNI
                     DSMSESDPERQTLLTSQTQEGVIVGTPLYLSPEQALGSVIDARSDIFALGSLLYECIA
                     GRAPFDGATRMEICTKIIRDDPDPPSTINSDVSEAVDHIVLKALAKKPIDRYQSADEM
                     AEDLADVRSGFAATAEMRVIPRLSSHASGEQPVGALATLSDIFRRPRISVGYVVAGVV
                     AVALLGILGWWLTRPTAHQPTPEAKRLYDLGVNAMREGAFFKSSKLLQQAVGTDERFA
                     LAHARLAEAWTELDVPDDAKNELLIAQNLVPNRAALVPVDSLRLQAISNTVTRDFPAA
                     VENYRRLVSTVPANEKAFALVDLGRAHEKGEQLQPAIDAYRQATEIDAHNAAAFLRLG
                     VALGRAQKYQEAESALKRANDLFDISNEVEGMTEVFFQRGNLLQQQGKIADAEVAFGK
                     ALERSTSLENNDQRIRTLQQLSNTFILAGNATKAQQYSEQAMALARSNRMENLTTLGL
                     IEIGRAYMILGNVAEADKNFNEALRLAQLYKGRYAEARAQLALGALRKQQDNPEAALT
                     YLQNALRFFEQGHYGKETFSTYFNLGYVQIELGKYDDAKQTFERLLKAAQAVGDNQFI
                     AYGHNGLGYVLLDSERFPEAWNHFYEDYKIEKSINA"
     gene            2510..2998
                     /locus_tag="VIT19_03095"
     CDS             2510..2998
                     /locus_tag="VIT19_03095"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY5837994.1"
                     /translation="MRRRKIDGCPIAGALQLIGDKWTLLVVRELYARPKRTTELLEEL
                     HPISSRTLMGRLKEMEQDEIILRVNYGGLPRRVEYELTERGRRLVPLLDALMKTGQAL
                     DCNHCEDRKQQLGYYCDFCPNVRGEHGHIGMDERDFDRNIAPPPSEPAPMRRPKDDIV
                     LL"
     gene            complement(3010..>4251)
                     /locus_tag="VIT19_03100"
     CDS             complement(3010..>4251)
                     /locus_tag="VIT19_03100"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5837995.1"
                     /translation="DAARRVGGPDELNNQGDDLFDAGQYEKAIDLYKRALRQKPDFPE
                     AHLNLSEAYFNLGRYDEAIAAANQAIQLRPDWADAYVALGNAYLKLDRDEEAIAPLRK
                     ALELAPQNSPARDSLSLIYYDQGVAAYNANKFDEAIAAYQQALTVKPEYPEAHNNLGD
                     AYRRQEKFPEAADAYKLAVRYRGDYTEAYSNLSWMYDKLGKYPEAAEAYRQVIRLKPD
                     DAEANNNMGYALGKSRRWSEAEAPLKRAIQLKPDYAEAYSNLGWVYNNLGRLAEAVAP
                     LRKAIELDPKMPEAHFNLGLTFSRWKQTDTAIVEKQKNDAVSEFKVATELKPDWAAAQ
                     NNLGFAYGQLGKWKEAIAAHKEAIRLKSDYAGAHFNLGFAYLNSGDKKKAEQEYKILK
                     PLNLGLANQLYFIIHKKAPPK"
BASE COUNT          804 a         1234 c         1218 g          995 t
ORIGIN      
        1 cgcgttgatc gacttttcga tcttgtaatc ttcataaaag tggttccacg cctcgggaaa
       61 cctctcgcta tcgagcagca cgtaaccgag cccgttgtgc ccgtaggcga tgaactgatt
      121 atcgcccacg gcctgcgccg ccttgagcaa ccgttcaaat gtttgcttcg cgtcgtcgta
      181 cttgcccagc tcaatttgca cgtagccgag attgaaatac gtgctgaacg tttccttgcc
      241 gtaatgaccc tgttcaaaga atcgtagtgc gttctgaaga taggttagcg ccgcctcggg
      301 attgtcctgc tgtttccgca gagcaccgag cgccaattgc gcgcgagcct cggcgtaacg
      361 gcctttgtaa agttgcgcga gccgcagtgc ttcattgaaa ttcttgtctg cttcggcaac
      421 gttgccgaga atcatatagg ccctgccgat ctcgatcagg ccgagcgtcg tgagattctc
      481 cattcggttc gagcgcgcca gggccatcgc ttgttccgaa tattgctgcg ccttcgtggc
      541 atttccggcg aggataaaag tgttgctcag ctgctggagc gtcctgatcc gctgatcgtt
      601 gttctccaga ctcgtcgagc gttcgagcgc ctttccaaac gccacttcag cgtccgcgat
      661 tttcccctgc tgctgcaaaa gattcccgcg ctgaaaaaaa acttcggtca tgccttcgac
      721 ctcgtttgaa atgtcgaaca ggtcattcgc tcgcttcagc gcgctctcgg cctcctggta
      781 tttttgagcg cgaccgagcg ctactcccag tcgcaggaat gccgccgcgt tgtgcgcatc
      841 gatttccgtg gcttgccggt acgcgtcgat cgctggttgg agttgctcac ctttttcatg
      901 ggcgcgtccg agatcgacca gcgcgaacgc cttttcgttt gccggcacag tcgaaaccaa
      961 ccgccggtag ttttcgacgg cagcaggaaa atcgcgcgtc acagtgtttg agatcgcttg
     1021 cagtcgcaaa ctgtctacgg gtaccagcgc agcgcggttc ggaaccaaat tttgcgcgat
     1081 gagcaattcg ttcttagcgt cgtccgggac atctagttca gtccatgctt ccgccaaccg
     1141 tgcgtgcgcg agcgcaaaac gctcatcagt ccccacggcc tgctgcaaca gcttgctcga
     1201 tttgaagaag gcgccttcgc gcatggcgtt aacgcccaaa tcgtacagac gttttgcttc
     1261 cggtgtcggc tgatgcgcgg tgggtcgagt cagccaccac ccgaggattc caagcagcgc
     1321 caccgctacg acaccggcaa caacgtaccc gaccgaaatt cgtggcctgc gaaaaatgtc
     1381 tgacaatgtc gcgagggcgc cgacgggttg ttcgccgctg gcgtgcgacg acaggcgcgg
     1441 gatgacgcgc atttcggccg tcgccgcaaa gccggaccga acgtccgcca aatcttcagc
     1501 catttcatcg gccgattgat aacggtcgat cggttttttg gcgagcgcct tcagcacgat
     1561 gtgatcgacg gcttcagata cgtcgctatt gatggtcgaa ggcgggtccg gatcatcgcg
     1621 gatgatcttt gtgcagattt ccatgcgcgt cgccccgtcg aagggcgccc gtcctgcgat
     1681 gcattcgtag agtaaagagc cgagcgcgaa gatgtcgctg cgggcgtcga tgactgaacc
     1741 aagcgcttgt tccggcgaca aataaagcgg ggtgccgacg atgacgcctt cctgtgtttg
     1801 tgacgtcagc agagtctggc gttccggatc gctttcactc atcgaatcaa tgttgagctg
     1861 cttggctaag ccaaaatcca ggaccttcac atcgccgcgg tggtcgaccg caacgtttga
     1921 cggcttgatg tcgcgatgga cgaccccgtt gcggtgcgct tcgccgaggg ctgcggcaac
     1981 ctgttgaatg attaccagcg cccgcgcgat cgtaagcgag tctgccttca acaaatcggc
     2041 gagtgtttga cccttcacca gttccatcac gatgtagggc acgccctctt ttgtttcgcc
     2101 gtaatcgtga atcgtggcga tatgcggatg tgacaatgcc gacacggcgc gcgcctcgcg
     2161 cagaaatcgc gtgcgaaagt gctgctcgtt ttgtccgggt ttgatcgtga gggttttgat
     2221 cgcaacgcgc cgcccgagca cggtgtcttc cgccacgtac acgacgccca tgccgccttc
     2281 gccgatcttt tcgatgacgc gatagtgcga gatggtctgg ccgatcatgt tggtcgcggt
     2341 gacgcccggc taagttgcgg aactcgtgac gttgggtcgg cacgacttag gaacactcgc
     2401 attgtgggac aaagcggtag tgaattcaag agttacgcgc gtctgcgaaa agtctggagt
     2461 tgcgcctgtg tcgatgtgat aagctctgcg cagaaagcga gaaaaaacgg tgcgacgacg
     2521 caagatcgat ggctgtccaa tcgcgggtgc gctgcaactg atcggcgata aatggaccct
     2581 gctggtggta cgcgagcttt acgcgcgtcc aaagcgcacg actgagttgc tggaagaact
     2641 gcacccgatc agcagccgca ccttaatggg ccgtctaaaa gagatggagc aggacgaaat
     2701 catcctgcgg gtgaattacg gcggccttcc tcgtcgagtc gaatatgaac tcacagagcg
     2761 tggccgccgt cttgtgccct tgctcgacgc cttgatgaag acgggccagg cactcgactg
     2821 taaccattgc gaggatcgca aacagcaact gggttactac tgcgactttt gtcctaacgt
     2881 ccgcggggaa cacggccaca tcgggatgga cgagcgagac ttcgaccgca acatcgcacc
     2941 gcccccatcc gagcctgcgc ccatgcgacg tccgaaagac gatattgtgt tgttgtaagt
     3001 tttcgcgccc tacttcggcg gcgccttctt gtgaatgatg aaatagagct ggttcgccag
     3061 gcccaggttc agaggtttca gaatcttgta ctcctgctcg gctttcttct tatctcccga
     3121 attcaagtaa gcaaagccga gattgaaatg cgcgcccgcg tagtcagact taagccggat
     3181 cgcttctttg tgcgctgcga tcgcttcttt ccacttgcct aactggccgt aagcgaatcc
     3241 cagattattc tgcgccgccg cccaatccgg cttgagttcc gtggcgacct taaactccga
     3301 gaccgcgtca ttcttctgct tctctacgat tgcagtatcg gtctgcttcc acctgctgaa
     3361 cgttagtccc aggttgaagt gggcttccgg cattttcgga tcgagctcga tggctttccg
     3421 gagcggcgcg actgcttccg ccaatctgcc caggttgttg taaacccaac cgaggttgct
     3481 gtaagcctca gcgtaatccg gcttcagttg aatcgctcgc ttgagcggcg cttccgcttc
     3541 actccaacgc ctgctcttgc cgagcgcgta acccatgttg ttgttcgctt cggcatcgtc
     3601 cggctttagg cgaatgactt gccggtaagc ttcggctgct tcgggatact tgcccagctt
     3661 gtcgtacatc catgaaagat tgctgtaggc ctcggtgtag tccccccggt aacgaacggc
     3721 cagcttgtag gcgtcggccg cctcagggaa cttctcctga cgccggtacg cgtcgccgag
     3781 gttgttgtgg gcctcggggt attcgggttt gacggtaagc gcctgctggt aagccgcgat
     3841 cgcttcgtcg aatttgttcg cgttgtaagc cgccacgccc tggtcgtaat agatgaggct
     3901 caatgagtcg cgtgcaggag aattctgcgg tgcgagttcg agcgctttcc taagcggggc
     3961 gatcgcttcc tcgtcacgat caagttttag gtaagcattg ccgagcgcga cataagcatc
     4021 cgcccagtcc ggcctcagtt gaatcgcctg gttcgcggcg gcgatggcct cgtcgtaacg
     4081 ccccaggttg aaatacgctt cgctcaggtt cagatgcgcc tcggggaagt ccggcttttg
     4141 acgcagcgcg cgcttgtaga ggtcgatagc tttctcgtac tgacccgcat cgaacagatc
     4201 gtcgccctga ttgttcagct cgtccggacc gccgacgcgc cgcgcggcgt c
//
LOCUS       DATDBY010000159         2038 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1520906, whole genome shotgun sequence.
ACCESSION   DATDBY010000159 DATDBY010000000
VERSION     DATDBY010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1520906"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1410)
                     /gene="secD"
                     /locus_tag="VIT19_03105"
     CDS             complement(<1..1410)
                     /gene="secD"
                     /locus_tag="VIT19_03105"
                     /inference="COORDINATES: protein motif:HMM:TIGR01129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEY5837996.1"
                     /translation="MKKKNVIQRTIIIVVITIVGIYLVIGPRGRRPRLNDFTWSGIKT
                     NLRNNIRLGLDLKGGSHLVMRVRVDKYLAKLTEDNSAAARKAAEDAGFQIKEARAETA
                     GEYRFILDAADASKLNDIQNAVKTKVDVTDWSASVSGSTISWTLSQTAQRVLAEQATV
                     QAQRIIEGRLDQFGVAEPVVQRHGSQSSYRILVQMPGIQDPERVKQLMKAESRLELVH
                     VISPAAPAGLQSYASQEEALASLGGGNIPQNRKILQYSERDEPTAAGDTTTQPQADKP
                     KRWVVVENPPVIDGSELRNATAVQASGGVNDYQISFALKPSGADKFSKWTGANINEYM
                     GIVLNNEVKSAPYIKGQIYDQGEITGRFTQQSAEDLALTLRSGALPAPIEYQEERTVG
                     ASLGDDSIRSGVKASLYGLLFVVAFMLFYYRGSGVNAVIALLLNMILMLAGLIVFGAT
                     LTLPGIAGMILTIGMAVDSN"
     gene            complement(1426..1719)
                     /gene="yajC"
                     /locus_tag="VIT19_03110"
     CDS             complement(1426..1719)
                     /gene="yajC"
                     /locus_tag="VIT19_03110"
                     /inference="COORDINATES: protein motif:HMM:TIGR00739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEY5837997.1"
                     /translation="MLLLLLQGAGGFGFLIPMLLVFGVFYLLLIRPQQKKQRQLQAQI
                     ADLKAGDKIVTTGGVIGTITAVKDTSFLVRSAEKTILEIARSAVAGVDGEEKK"
BASE COUNT          416 a          609 c          550 g          463 t
ORIGIN      
        1 gttcgaatcg acggccatac cgatcgtgag aatcatgccg gcaatacccg gcagcgtcag
       61 ggtcgcgcca aaaacgatca ggcccgccag catcagaatc atgttcagca acagagcaat
      121 cacggcgttc acgcctgagc cccgatagta gaacagcatg aatgcgacga cgaacagcag
      181 accgtacaaa gaagccttga cgccggaccg aattgagtca tcgcccaagc tcgcgcccac
      241 ggtgcgttct tcctgatact cgattggggc cggcagcgcg cctgagcgca acgtcaacgc
      301 gagatcttct gccgattgct gggtgaatct tccggtgatt tcaccttgat cgtaaatctg
      361 gcccttgatg tacggcgctg atttgacttc attgttcagc acgatgccca tgtactcgtt
      421 gatgttcgcg cccgtccatt tgctgaactt gtctgcgccc gaaggcttca aagcgaacga
      481 aatctggtag tcattaacgc cgccgctcgc ttgcaccgcc gtcgcgttcc tcaactcgct
      541 accgtcgata accggaggat tctcgactac gacccaacgc ttcggtttgt cagcttgcgg
      601 ttgagtggtg gtgtccccgg cagccgtggg ctcgtctcgt tccgagtact gcaagatctt
      661 tcggttttgc ggaatgttcc caccacccag tgacgcgagc gcctcctcct gactcgcata
      721 ggactgcaat cccgccggcg ccgccggact gatcacatgc acaagttcaa gtcgcgattc
      781 agctttcatc aactgcttga cgcgttcggg atcctggatg ccgggcatct gcacaagaat
      841 gcgataagaa ctctgcgagc cgtgtcgttg caccaccggc tcggcgacgc cgaattggtc
      901 caaacgtcct tcaatgattc gctgcgcttg taccgtcgcc tgttctgcca gcacgcgctg
      961 cgcggtctgc gacagcgtcc acgaaattgt gctgccgcta acggaggcag accagtcggt
     1021 gacgtcaact ttcgtcttta ctgcgttctg aatgtcgttc agctttgacg cgtccgcggc
     1081 gtcgagaatg aatcggtact cgccggccgt ttccgcccgt gcttccttga tttgaaatcc
     1141 ggcgtcttca gcagcttttc gcgccgcggc ggagttgtcc tcagtcaact tcgccaggta
     1201 cttatcgacg cggacgcgca tcaccagatg cgagccgccc ttcaaatcca agccgagccg
     1261 aatattattc ctgagattcg tttttatgcc tgaccacgta aagtcgttca ggcgcggccg
     1321 ccgcccacgc ggaccgatga ccagataaat tccgacgatc gttatgacaa cgatgatgat
     1381 cgtgcgctga atgacgttct ttttcttcat gggaactgcg gcgtgttact tcttctcttc
     1441 gccgtccact ccggcgacag ccgagcgcgc aatctcgagg atcgttttct cagcgctgcg
     1501 caccaggaag cttgtgtctt tgacggcagt gatggtgccg atgacgccgc cggtggtgac
     1561 gatcttgtca ccggctttta ggtcggcgat ttgggcttgc agttgacgct gtttcttttg
     1621 ctgcggccga atcaacagta gatagaagac accaaacacc agcagcatcg gaatgagaaa
     1681 tccgaaaccg cccgcgcctt gaagtaatag aagcaacata tttgttggtt atgaaccctt
     1741 ctgatccgtc tctaccaccc cacgcgggct gcccgcctgg ggaccccggt tcgctccggg
     1801 ttctgacacg cgctattcca aaccagagct gagctgctca gtgaattctc gccggaattt
     1861 tgcgaattgg ccagaccgga tagcttgcct gacgtgcctc atggtgtcaa ggaagaacgc
     1921 cagattgtga tgcgtcagaa gaatgcttgc cagcatctcg ccggcaaggt acagatgccg
     1981 aatgaaagcg cgcgaatggc gccgacagac tgcacaaccg caggcttcgt ccagaggt
//
LOCUS       DATDBY010000160         2276 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1088684, whole genome shotgun sequence.
ACCESSION   DATDBY010000160 DATDBY010000000
VERSION     DATDBY010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1088684"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..489
                     /locus_tag="VIT19_03115"
     CDS             <1..489
                     /locus_tag="VIT19_03115"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5837998.1"
                     /translation="VKRTIGASVALFDLAEGDTIDLLGVAGHGFDLDAQVGRDVVFVA
                     MGTGVAPLRSALRHVLNRRERFGQLVVLYGARTPDEFCYRDETDDWEKAGVELRQVIS
                     RPDGHDWSGPTGYVQSLLDHVLPDLKSPVALVCGSREMIAQTRDRLQQMGFAREDILT
                     NY"
     gene            complement(593..1804)
                     /locus_tag="VIT19_03120"
     CDS             complement(593..1804)
                     /locus_tag="VIT19_03120"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEY5837999.1"
                     /translation="MSANVGLAIQCVGIVLVALLTVSMRGSIKSAAVNYWAAAWMCLC
                     LALVSLFIGIHVVSGQKLFFSGYFLGEYAFGLLFIAGCRHYATGARLNRRAIFVGGTA
                     VIAAALLPFLSADFNDLFMVHATIFAALFALSALSLRPAFGSVKSSPGLRVMLAALVL
                     LAIDFLHYVPVFAARKGLWGFTVPAGYLQYTSIFDLILEILLGFGTIMVLLEGVRREV
                     EATNAKLTHAHDQLELTARMDPLTEALNRHAFHSLLSRGEGGEAQDVDGCVAIIDIDN
                     LKPINDTLGHSVGDKAIRAVARAVRSLIRADDMLFRWGGDEFMVLMFKLDQKEARRRL
                     DTLNSILESNAEKWISAPAKVSVSVGVWGFVSLNELGGAIEKADQAMYSTKQERRAKI
                     KTGINPQITQV"
     gene            complement(2000..>2276)
                     /locus_tag="VIT19_03125"
     CDS             complement(2000..>2276)
                     /locus_tag="VIT19_03125"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5838000.1"
                     /translation="RAYQRALALRPNSADAHNKLGDAYFYAGRFTEAIDAYHEAARLR
                     PKDGEAYYNLALAYLEIGDRGAAMTQSRMLATIDADLNKKLLSEIQR"
BASE COUNT          519 a          651 c          645 g          461 t
ORIGIN      
        1 gttaagcgga cgattggagc aagcgtcgcg ctattcgatc tggcagaagg cgacaccatt
       61 gatctgctcg gcgtcgccgg ccacggattc gatttggacg cgcaggtcgg acgtgacgtg
      121 gttttcgtcg cgatgggaac aggcgtggcg cccctgcgct cagcgctgag gcacgttctg
      181 aaccgtcgtg aaagatttgg tcagttagtc gtgctctacg gcgcgcgcac gcccgacgaa
      241 ttttgttatc gagacgagac cgacgattgg gaaaaggctg gagtcgagtt gcgccaggtg
      301 atctcgcgtc ccgacggtca tgattggtcg ggaccgactg gctatgtgca gtcgttactc
      361 gaccacgtgt tgcccgatct gaaatcgccg gtggccctgg tgtgcggctc gcgcgaaatg
      421 atcgcccaga cacgagatcg tttacagcag atgggattcg cgcgtgagga tattttgacg
      481 aactactgag ttatagtcag aaccacctgc ggtagcgggt ggttaatgta gcagaacaag
      541 ttatctcgtt ccaagatcaa ccacccgcta ccgcaggtgg ttctgacgcg atctagacct
      601 gcgtaatctg cggattgatt cctgttttta tcttcgcgcg tcgttcctgc ttagtgctgt
      661 acatcgcctg atcggctttc tcgattgcgc cgcctagttc attcaacgaa acaaaacccc
      721 agacccccac ggacacggaa acctttgccg gcgcgctgat ccacttttcc gcattgcttt
      781 ccagaatcga gttcagcgtg tccaggcgcc gtcgcgcttc cttctgatcg agcttgaaca
      841 tcaggaccat gaattcgtcc ccgccccaac ggaacagcat atcgtcggcg cgaatcagcg
      901 agcgcacggc gcgagccacg gcgcgaatcg ctttgtcacc gacgctgtga ccgagggtat
      961 cgttaatcgg cttcaaattg tcgatgtcga taatcgcgac acacccatcc acatcctgcg
     1021 cttcgccacc ttcgccgcgg ctcaaaagcg aatggaacgc atggcgattc agggcttcgg
     1081 ttaaaggatc catgcgcgcc gtcaattcga gttggtcatg cgcgtgggtt aacttcgcat
     1141 ttgtggcctc gacttcacgc cgtacgcctt caagcaaaac catgatcgtg ccaaagccga
     1201 gcaggatttc gagaatcaaa tcgaagatcg aagtgtattg cagataaccg gccggcaccg
     1261 taaaacccca gagcccttta cgcgcggcaa acacggggac gtaatgcaga aaatcaatcg
     1321 ccagcagaac cagggccgcg agcatcacgc gcaatccggg gctgctcttt acgctcccga
     1381 acgccggccg caacgataaa gctgagaggg caaacaacgc ggcgaagatc gtcgcgtgca
     1441 ccatgaagag gtcattgaaa tccgctgaca gaaaaggcag aagggcggcg gcgatgacgg
     1501 ccgtgccccc gacgaaaatc gctcgccggt tcaaacgcgc gccagtcgcg taatgacgac
     1561 agcccgcgat aaacaaaaga ccgaacgcgt attcgccgag aaaataacct gagaagaaaa
     1621 gcttctgtcc ggaaacaaca tgaatcccga tgaacaggct caccaacgcc agacaaagac
     1681 acatccaggc cgccgcccag taattcacgg ctgcgctttt gatcgagccg cgcatcgaga
     1741 cggtcagcaa cgcgaccaga acgatgccga cacactgaat tgccaggcca acgtttgcgc
     1801 tcatagggga tgttccattc gtgtgagata catccggaac ggatgcgcga agaaggggag
     1861 gcgaccctgc tcgccaaggt ggattgtacc gaaatcgagc ggctggaggc tagagttttg
     1921 ttgagtgagg cagtagcccg accgtcaaag agggcgtctt ggttgttaag ggcctaacgg
     1981 tcgagctact cgccatcact taccgctgta tctcactcaa caatttctta ttcagatccg
     2041 catcaatcgt cgcgagcatt cggctttgcg tcatcgcggc tccgcgatca ccaatttcga
     2101 gataagccag cgcgagattg taataggcct cgccgtcttt cggccgcagg cgcgcggctt
     2161 catgataagc gtcgatcgct tccgtgaatc ggccggcgta aaagtacgcg tcgcccagtt
     2221 tgttgtgcgc gtcggctgag ttcggccgta acgccaacgc ccgctggtaa gcgcgc
//
LOCUS       DATDBY010000161         5380 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1519407, whole genome shotgun sequence.
ACCESSION   DATDBY010000161 DATDBY010000000
VERSION     DATDBY010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5380
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1519407"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2837)
                     /locus_tag="VIT19_03130"
     CDS             complement(<1..2837)
                     /locus_tag="VIT19_03130"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY5838001.1"
                     /translation="MRLLYLTHQYFPRHVGGTEVYTRGLAIRMQQAGHDVRVVTAVES
                     PDPKCTLVDTEHDGVPVTEVHHNLSWAVDPARAEFDNPEIAEVIAPLLERERPDVVHA
                     LHGMKLSASALDLCYRLRLPTVVTLVDFWFICGRHTLLRWNGRPCTGPAHDLDCLECM
                     HDSHGFADSSLRSLSPGILRIVAERTLASLQPLKPFWRDVDAVRKRQNHLRRIVERAD
                     RVIALSDFQKAMYVRNGYSDEKIQVLHHGLETEGLKPATAALSEPLEFIYIGSLVQHK
                     GVHVLLEAFARRPQVNIRLSIYGDATLPSPYVDSLKQQAANDPRVKLMGTFPISEMGR
                     VLGTAHALVMPALWYENEPLVVKAARFVGLPVLASNIGTLATSVQDGVNGKLVAPGDV
                     EAWADAIATFRPLPLKPDTSIKTMDENAREMLTIYEEAYAKPRCPRTEYLVDLLSAAR
                     IDAPSDNYVQVQRVVLNGEVETAIFQHPPSTACFPPIVIGRNATLKFGCGIREIAWTR
                     IKHDVEFSISVEAESGRELLFQTALKRRDRYSDCAWQRHELDLSKYEGRSIVLVLRTR
                     SKRSTEYAWAAWADPQIAHEVAAKQGRRRTDRHPHVFLITADALPARHLGCYGSRDVE
                     TPHLNELAAEGVLFEQAWSQSCLTLGSYVSLLTGLHPAEHGVMREWQPFPLSRIDLPR
                     TLAAHGYHTLLGVSSGEMSGRDNYLEQLFHEVLPTLSNPMQDGEVTTRQFINWFERRP
                     DQPIFSWLHYFDAHPPGMPPSPFNSKYYAGDPTDPRNTYLAQDVPKIRAVESLLVLQI
                     GMPALERGQPVAEIVELLEDTAAVLKGESNFRPDLAEHILSLGKRGMRGRGRVGCGEW
                     LAKQAHEIKTGRASRELLQWLNEIAELLDPTEKDLLSWLRGVVDFRYPLAMYYGSVSY
                     FDSHVGRLVSYLKENDIYDQSLIVVTAPHGE"
     gene            complement(2834..4828)
                     /locus_tag="VIT19_03135"
     CDS             complement(2834..4828)
                     /locus_tag="VIT19_03135"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5838002.1"
                     /translation="MTDRQTINDRDDALAHTESDCDELARERDQLILHTRALDREIDA
                     RDKTIAAIWDQLDAAHSQTAAVFSSRSGRWVNRYWRVKAGVARVARQGFRRLSQNGFG
                     NGAHEVDYRSWVKRHGVLTIKDRASIARRIAELKYRPRISIFVLPSAQGGGFLGRTID
                     SLRAQLYPDFDVSIISHDASTLSPSKSADERFRILTPEDGEAAVSVVNRTLQASGEFV
                     GFVLAGDELAAHALYLFAEQLQRFAGAQIIYSDEDSIDADGARSNPYFKPDWNQDLLH
                     SGDFLSRLAIYRNTLLQSIGGLRSDFGESAFYDLGLRSTEGLSRFRIRHLPHVLYHGR
                     AAPHSSNGDNQRRALQEHFDRQSIEARVLSSPSGSCRVQYPLDGANPLVSVIIATRDR
                     VDLLRQIVNDVLNKTDYAPVELIVVDNQSRDPATREYLQEIQKHPATSVLSYDGYFNF
                     SAINNLAARSARGEVLAFLNNDLKIISGDWLREMVSHAMRAGIGAVGAKLYYPDDTIQ
                     HAGIILGLCNLAGYVHRYAPRDAAGHGGRLNRVQDCSAVTAACMVLKRTAFEDVGGFD
                     DANLPVAYNDVDLCLRLRERGYRILWTPHAELYHLESASRPSDSSPEEKKRYQRECAY
                     LKARWRQEVARDPFYNPNLTIAAEDYSLAWPPRLGKPWNA"
BASE COUNT         1148 a         1540 c         1532 g         1160 t
ORIGIN      
        1 atctcgccgt gtggcgccgt gacgacaatc aaactctgat cgtagatatc gttttccttc
       61 aaatacgaaa ctagccggcc gacgtgtgaa tcgaaatacg aaacactgcc atagtacatc
      121 gccagcgggt aacgaaaatc aaccacgcca cgcaaccacg agagcaggtc tttttcggtt
      181 gggtccagca gttcagctat ctcgtttaac cattgcagca gctcacgcga ggccctcccg
      241 gttttgattt cgtgcgcctg tttggccagc cattctccgc atccaacgcg tccgcgacct
      301 cgcatgccgc gtttaccgag gctcaggatg tgttccgcca aatctggccg gaaattgctc
      361 tcccctttca ggaccgctgc ggtatcctcc aacaattcga cgatctcggc gacgggctgg
      421 ccgcgttcga gcgccggcat tccgatctgt agaaccagaa gcgattcaac cgcccgaatc
      481 ttcggcacgt cctgcgcgag ataagtgttt cgcgggtctg tcggatcgcc ggcatagtac
      541 tttgaattga acggagacgg gggcatcccc ggcggatgag catcaaagta atgaagccat
      601 gaaaagatgg gctggtctgg ccgtcgttca aaccaattga tgaactggcg cgtcgtgacc
      661 tctccgtcct gcatgggatt tgagagagtc ggcaggacct catgaaataa ctgctccagg
      721 taattgtctc gccccgacat ttcgccggag ctaaccccca gcaatgtgtg atagccgtgt
      781 gccgcgagtg tccggggaag atcaatgcgc gagaggggaa agggttgcca ctcgcgcatg
      841 acgccgtgtt cagcgggatg cagcccggtt aagagtgaaa cgtacgaacc taaggtgaga
      901 catgattgag accacgcttg ttcgaatagc acgccctccg cggccaactc attcaggtga
      961 ggcgtttcga catcacgact tccgtagcat ccgaggtggc gtgccggaag tgcgtcggcg
     1021 gtgatcagaa atacatgagg atggcgatct gtgcggcgac ggccttgttt ggcggcaact
     1081 tcgtgagcga tctgcgggtc ggcccaggcg gcccaggcat actcggttga tcgctttgac
     1141 cgagtccgca ggaccaggac gattgatctt ccttcgtact tcgacaaatc aagctcatgg
     1201 cgctgccagg cacagtcgga atagcggtcg cgccgtttta gcgccgtttg aaaaagaagc
     1261 tcgcgtccgg attccgcctc gacactgata ctgaattcga catcatgctt gatacgagtc
     1321 cacgcgattt ccctgatgcc gcaaccgaac ttaagtgttg cgttacgtcc gatgacgatc
     1381 ggagggaagc atgccgtgga aggcgggtgc tgaaagatcg cggtttctac ttctccattc
     1441 aggacgaccc gctgcacttg aacgtaattg tcgctgggcg cgtcaatcct ggcggcgctc
     1501 aacaaatcga ctagatactc tgttcgaggg catcttggtt ttgcgtaagc ctcttcgtaa
     1561 atcgtcagca tctcccgcgc attctcatcc atcgtcttga tcgacgtatc cggtttgagg
     1621 ggcagcggac gaaacgttgc gatcgcgtct gcccacgctt ctacgtctcc cggcgcgact
     1681 aacttgccgt ttacaccgtc ctgaacagac gttgccagcg tgccgatgtt gctcgcaagc
     1741 accggtaggc caacaaagcg cgcggcctta actaccagcg gttcgttctc gtaccacagg
     1801 gcgggcatga ccagagcatg ggcggtgccc agcacccggc ccatctcact tatcgggaac
     1861 gtgcccatca acttcacccg tgggtcattc gccgcttgct gcttcagcga atccacgtaa
     1921 ggactcggca gcgtcgcatc tccgtagatc gataaccgga tgttgacttg cggccgacgt
     1981 gcgaacgctt ccaataagac gtgtacgccc ttgtgctgaa caaggctgcc aatgtagata
     2041 aattccaggg gctcgctaag ggcggcggtg gccggcttta atccttcagt ttccaggcca
     2101 tggtgcaaca cctgaatttt ttcgtcggag tagccgttgc ggacgtacat ggctttctgg
     2161 aaatccgata acgcaataac acgatcggcg cgctcgacga tgcgccgcag atggttctgc
     2221 cgtttacgca ccgcgtccac atcgcgccaa aaaggcttta gcggttgcaa agaggcaaga
     2281 gtccgctcgg caacaatccg caaaatcccg ggactcaagc tacgcaacga gctatcggcg
     2341 aagccatgcg aatcgtgcat gcattccagg caatccaaat cgtgcgccgg gcccgtgcaa
     2401 ggtcgcccat tccagcgcag caaagtgtgc cgcccgcaga tgaaccagaa atcaaccagc
     2461 gtcaccaccg tgggcagtcg caagcgataa cacagatcca gcgctgacgc ggagagtttc
     2521 attccgtgta gcgcatgaac cacgtcaggt cgttcccgtt ccaacagcgg cgcgatcact
     2581 tcggcgatct caggattgtc gaattcagca cgggccggat cgacggccca gcttagatta
     2641 tgatggacct cggtaaccgg cacgccgtcg tgctcagtat cgaccagtgt gcacttcgga
     2701 tcgggcgact cgacggcagt gactacgcga acgtcatgac ccgcctgttg catacggatg
     2761 gccagacctc gggtgtaaac ttctgtgccg ccaacgtggc gtggaaaata ttgatgagtg
     2821 agatagagaa gcctcaagcg ttccacggct ttccaaggcg tggtggccag gccagcgagt
     2881 aatcttcagc ggcaatcgtc aggttagggt tgtaaaaggg atcgcgcgcg acttcctgcc
     2941 gccaccgggc tttcaaatac gcgcactcgc gctgatatct tttcttttcc tctggcgatg
     3001 agtctgacgg acgcgaggcc gattcgaggt gatacaactc agcgtgcggc gtccacaaga
     3061 ttcgataacc gcgttcccgt aacctcaagc aaaggtcaac gtcattgtag gcaaccggca
     3121 gattagcatc gtcgaatccg cccacgtcct cgaatgcagt tcgctttagc accatgcagg
     3181 cggcggtcac cgcggaacaa tcctggaccc gattcagcct tccgccatga ccggcagcgt
     3241 cgcgcggggc gtagcgatgg acgtaaccgg ccaggttgca caggcccagg atgatgcctg
     3301 catgctgaat cgtatcatcg gggtaataca gcttagcgcc cacggcgccg atgccggcac
     3361 gcattgcgtg gctgaccatc tcgcgtaacc agtcgccgga aatgattttc aaatcgttat
     3421 tcaggaatgc gagaacttcg ccgcgggcac tgcgtgcggc cagattgttt atcgcggaaa
     3481 agttgaaata cccgtcgtag ctaaggactg atgtggccgg atgcttctga atctcctgga
     3541 ggtattcgcg ggtagccggg tcacgactct gattgtcaac gacgatcagt tcaaccggcg
     3601 cgtaatctgt cttgttcaaa acgtcgttca caatctgccg cagtagatcg acccgatcgc
     3661 gagtcgcgat aatgacgcta accaaaggat tcgcgccgtc gagcgggtat tggacacggc
     3721 aagaccctga gggagaactc agcactctgg cctcgattga ctgccgatca aagtgctctt
     3781 gaagcgcgcg tcgctggttg tctccattgc tcgagtgcgg ggcggcgcgc ccgtgataaa
     3841 gcacgtgtgg tagatggcga atccgaaaac ggctgaggcc ttcagttgag cgcagcccca
     3901 gatcgtaaaa tgcactttcg ccgaagtctg agcgcagccc gccgatgctt tgcagcaggg
     3961 tgtttcggta gatggccagc cgcgacagaa aatctccgga gtgcagcaag tcctggttcc
     4021 agtcaggttt gaagtatggg tttgatctgg ctccgtcagc atcaatcgaa tcttcgtcgc
     4081 tgtagatgat ctgtgccccg gcgaagcgtt ggagttgttc tgcaaacagg tagagggcat
     4141 gggccgccaa ctcatcaccg gcaagtacga aaccgacgaa ttcgccgcta gcctgaagcg
     4201 tgcgattcac gacgctgaca gccgcttcgc cgtcttcggg cgttagtatt cgaaaccgtt
     4261 cgtctgctga tttcgacggc gacagagtcg aggcgtcatg cgagataatc gagacgtcga
     4321 agtccggata cagctgagcg cgaagcgagt cgatcgttcg gccaaggaat ccaccgcctt
     4381 gggcagaggg cagcacgaag atcgagattc gtggtcgata cttaagttcg gcgatccgcc
     4441 tggctatact cgccctgtcc ttaatcgtca gcacaccgtg acgctttacc cacgagcgat
     4501 aatcgacttc atgagcgcca ttcccgaaac cattctgcga aaggcgtctg aacccttgtc
     4561 gcgccacccg cgcgacgccc gcttttacgc gccagtagcg gttgacccag cgcccgcttc
     4621 gcgaactgaa gaccgccgca gtttgactgt gtgctgcatc gagttgatcc caaatcgccg
     4681 cgatcgtctt gtcccgcgcg tcgatttcgc gatctaacgc gcgcgtgtgc aatatcaact
     4741 gatctcgttc gcgtgccagt tcgtcacagt cagattccgt atgggcgaga gcatcatcgc
     4801 gatcattgat cgtttgcctg tcagtcatgc cggtgtgttg aagggcaaca atttagcatg
     4861 ccatctatct acaacgtagc cgccttcgcc ggatgaactt tcacctttgc agcggctccg
     4921 tcttatttcg ttaagtgagt ggattgtcgg cgaaccagac tgagcgtcag ttgcagtgtc
     4981 tagctcggcg aagcgcaacg tagttcttga cgggcgcgat ctcgtgtcag taaactccag
     5041 ccgattcctg ttcatatctg cgggagttgc cacgacggcg aacgcgccat tcgtagggca
     5101 tccgcacatg gtccgcgctg acatggagcg ctatgtgcgg gagtcgcgcg cgtgctgaaa
     5161 cctggcagca ggtgtcccac gacttttttc tgctcacgcc gaattgtgat tgcggtagag
     5221 aattcgcggc gtggttttcg tcaaatcaat gagcaagatc agcgtcataa tcccaaccca
     5281 cagccggccg cacttattgc cccgcgccgt cgaaagcgcg caggcggcgg gaaccgatgt
     5341 ggaggttatc gtcgttgatg acgcgtcggt tgatcggact
//
LOCUS       DATDBY010000162         2027 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_491950, whole genome shotgun sequence.
ACCESSION   DATDBY010000162 DATDBY010000000
VERSION     DATDBY010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_491950"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VIT19_03140"
     CDS             <1..282
                     /locus_tag="VIT19_03140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838003.1"
                     /translation="QILATGTPRDLVLAKVSRYALEVRDVGDLPLRSTSTDISAVTRN
                     SAHIYFAAEAEVLTPLMKEKDYEGRRRMIRLSNLEDVFLQLVGDNESAQ"
     gene            333..845
                     /locus_tag="VIT19_03145"
     CDS             333..845
                     /locus_tag="VIT19_03145"
                     /inference="COORDINATES: protein motif:HMM:NF016085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HEY5838004.1"
                     /translation="MSKAQDIIVRVLKYDGTEHRRWSARIASCEGSLIVLDAEFEYDV
                     KHEVLGEIPRGTRTAEYYWFKRWYNIFRFLEKDGRTRLWYCNINTPPTLENGVLSYID
                     LDIDVLVQPDFTYQVLDIEEFEQNAVGFGYGDELRREVQRAISEVTSLIETRQFPFTE
                     IEQPSPERTS"
     gene            852..1631
                     /locus_tag="VIT19_03150"
     CDS             852..1631
                     /locus_tag="VIT19_03150"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5838005.1"
                     /translation="MTLAFTSINLADTLAVLRRNIMVHLRLWRLNLVAPVIEPVISVL
                     GFGWGIGALVAGQVTGVSYLTFAGAGILGITVLMRAMFETTYAAYFRMVYQSTYDAIL
                     ATPVDAESLAFAEILWAVTHAFFDTLIILVVLAIFGGATSWWALLAPLPLLLGALFMA
                     GLSLGVTAHVRDIDAFNIYMAIFFSFMYVSGAWYPIEVLPVWLQIPAWAMPLTESIDL
                     TRAFLTGHFLKRHVYEAVYLVISALVACEWAMRSLRKRMVA"
     gene            1715..>2027
                     /locus_tag="VIT19_03155"
     CDS             1715..>2027
                     /locus_tag="VIT19_03155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013935707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEY5838006.1"
                     /translation="MSSQKQQPAKLSKLDQLRERERRAEEGGGAARVEKQHAAGKMSA
                     RERVEFLLDDGTFQEFDKLVEHRSRDFGLDKQKYPGDGVITGHGLIDGRKVFVFAQDF
                     TV"
BASE COUNT          423 a          528 c          595 g          481 t
ORIGIN      
        1 cagatactgg cgaccgggac gccgcgcgac ctcgtgctcg caaaggtctc acgttatgcg
       61 ctggaagttc gcgatgtggg cgatttgccg cttcgttcga ccagcaccga cattagcgca
      121 gtcacgcgaa acagcgctca tatttacttt gccgctgaag ccgaagtgtt aacgccgctt
      181 atgaaggaaa aggattatga gggacgccgg cgcatgattc gtctgtcgaa ccttgaagat
      241 gttttcctgc aacttgtcgg tgataacgaa tcagcgcagt agcccgacca ttgcagaaac
      301 ccgaccgtta gggagggtgc agttcggagg cgatgagcaa agctcaagac atcatagttc
      361 gggtcttaaa gtacgacggc accgaacacc gccgctggag tgcgcgcatt gcgagctgtg
      421 aaggttcgct catcgtgctt gacgccgagt tcgagtatga cgttaagcat gaagttttag
      481 gagagattcc gcgcggaact cgcacggctg agtactattg gttcaagcgc tggtacaaca
      541 tctttcggtt tctcgagaag gatggaagga ctcgactctg gtactgcaac atcaacactc
      601 cgccaaccct ggaaaatggc gtgttgagct acatcgatct ggatattgat gtcttagtgc
      661 aaccggattt cacttatcag gttctcgata tcgaggagtt cgagcaaaac gccgtaggtt
      721 ttggttatgg agacgaactg cggcgtgaag ttcagcgcgc aattagtgag gtgacttccc
      781 tgatcgaaac gcgccagttc cctttcaccg aaatcgagca gccgtcgcct gaacgaacga
      841 gttaattagt catgacctta gcattcacga gcattaacct ggcagatacg ctggccgtgt
      901 tgcgacggaa tatcatggtg cacctccgtc tgtggcgcct taatctggtc gccccagtta
      961 tcgaaccggt catatccgta ctcggtttcg gttggggcat cggagcgttg gtggccggcc
     1021 aggtaaccgg cgtttcttat ctcacgttcg cgggtgcggg catcctcggc attactgtcc
     1081 tgatgcgcgc catgttcgaa actacttacg cggcgtactt tcgcatggtg taccaatcga
     1141 cttacgacgc gatcctggca acgcccgtgg atgccgagtc gctggcgttt gccgaaatac
     1201 tctgggccgt cacgcacgct tttttcgaca cgctgatcat tctggtggtg ctggcgattt
     1261 ttggaggcgc gacttcctgg tgggccctgc tcgctcctct gccgttgtta ctcggcgcgt
     1321 tgttcatggc tgggctatct ctgggagtaa ctgcacatgt gcgcgacatc gatgccttca
     1381 acatttacat ggcgatcttt ttctcgttca tgtacgtgtc gggcgcgtgg tatccgattg
     1441 aagtattgcc tgtgtggctg cagattccgg cgtgggcgat gccgctgacg gaatcgattg
     1501 acctgacgcg ggcgtttttg accggccact tcctgaaacg ccacgtgtat gaggccgtct
     1561 atctggtaat atcagcgctc gtggcgtgcg aatgggccat gagaagcttg cgaaagcgaa
     1621 tggtcgctta agcgtcagta gtccgttgtc agttgtccgt ggagcactcg gcggttacaa
     1681 ctgacaactg accactgacc actgaccact gacaatgagt tcccaaaaac aacagcccgc
     1741 gaaactttcc aagctcgatc aactgcgtga gcgtgagcga cgcgcggaag agggcggtgg
     1801 cgcggcgcgg gttgagaagc aacatgccgc gggcaagatg agtgcgcgtg aacgagttga
     1861 gtttctgctc gacgacggca cgtttcagga gttcgacaag ctggttgagc atcgctcgcg
     1921 ggacttcggc ctcgacaaac agaaatatcc gggcgatggc gttattaccg gccacggcct
     1981 gatcgacggc cgcaaagtgt ttgtcttcgc gcaggacttc acagtct
//
LOCUS       DATDBY010000163         2296 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_396126, whole genome shotgun sequence.
ACCESSION   DATDBY010000163 DATDBY010000000
VERSION     DATDBY010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2296
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396126"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1069
                     /locus_tag="VIT19_03160"
     CDS             <1..1069
                     /locus_tag="VIT19_03160"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEY5838007.1"
                     /translation="AIARVAGLEASEVDDVIMGCAMPEAEQGMNVARAAAIRAGLPVE
                     TSAMTINRFCSSGLQTIAMASDRIRTNGAHVIVAGGLESMSMIPMGGHIIRPNPTLMD
                     TYPDFYLSMGLATENVARKYEVTREEQDAFALQSHQRAVAALDADKFKDETVPLTVSL
                     EDLDAKGKKQRREITFDKDEGPRRDSTAAALANLKPAFQIKGTITAGNSSQMSDGAAA
                     VIVMSEDRAKELGAKPLARLVAYATAGCPPEEMGIGPVYAIPKALKLAGLTLDDIAVF
                     ELNEAFAAQSLAVIKTLELNPEKVNVNGGAIALGHPLGCTGAKLTASILRELERRDAR
                     YGMVTMCVGGGMGAAGIIERL"
     gene            1130..>2296
                     /locus_tag="VIT19_03165"
     CDS             1130..>2296
                     /locus_tag="VIT19_03165"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY5838008.1"
                     /translation="MAAVLERKEIIKGGSFLIEERTPSEVFTPEDFNEEHRMIADTTR
                     QFMDAEVLPRINELEAKDWKLARELVKQAAELGLVGANIPEEYGGLALDQTSSALIAE
                     YLGRSASFATTLGAQSGIGLLPIVYFGTEAAKKKYLPPIAAGELVTAYALTEAGSGSD
                     AMAAKATAKLSEDGTQYILNGEKMFITNGGFADIYVVFAKVDGDKFTAFIVERQEGCH
                     PGAEEHKMGIKGSSTTPLILADAKTPVENLLGEVGKGHKIAFNILNIGRFKLGAMCLG
                     GMKLALTESVKYANERHQFGKPISSFGAIKSKLGEMAVRTWVGEAMTYRTLGMIEEGL
                     NAIEDSKDMDARLKAIEEYAAECSIIKVALSEYCDYITDEMVQIFGGYGYSADYP"
BASE COUNT          529 a          625 c          718 g          424 t
ORIGIN      
        1 ggccatcgcg cgtgttgccg gcctggaagc gtccgaagta gacgacgtga tcatgggctg
       61 cgccatgcca gaggccgagc aagggatgaa cgtcgcgcgc gcggccgcga ttcgcgccgg
      121 cctgccggtc gaaaccagcg cgatgaccat caatcggttt tgttcttcgg gattgcaaac
      181 catcgcgatg gccagcgatc gcattcgcac gaatggcgcg cacgtgattg tcgccggcgg
      241 cctggagtcg atgtcgatga ttccgatggg tggccacatc atccgtccca acccgactct
      301 gatggacacg taccccgatt tttatctcag catgggtttg gcgactgaga atgtcgcccg
      361 caaatacgaa gtaacgcgcg aagagcagga cgcgtttgcg ttgcaatcgc atcaacgcgc
      421 ggtggccgct ttggatgccg acaagttcaa agacgagacg gtgcccttga cggtctctct
      481 cgaagacttg gacgcgaaag gcaaaaagca acgccgcgag atcacttttg ataaggatga
      541 aggcccgcgg cgcgacagca ccgcggcagc gctcgcgaat ttgaagccgg ctttccagat
      601 caaaggcacg atcactgccg gtaattcttc gcagatgtcg gatggcgccg cggccgtaat
      661 cgtgatgtct gaggatcgcg caaaggagct cggtgcgaag cctctggccc gattggtcgc
      721 gtacgcaacc gccggctgtc cgccggaaga aatgggcatt gggccggtgt atgcgattcc
      781 gaaagcgctg aaactcgccg ggttgacgct cgacgatatt gcggtcttcg aactgaatga
      841 agcattcgcg gcgcagtcac ttgccgtgat caagacgctc gaactgaatc ctgaaaaggt
      901 gaacgtgaat ggcggcgcaa ttgcgctggg ccatccactc ggatgcaccg gcgcaaaact
      961 gacggcgtcg atcctgcgcg agcttgaaag acgcgatgcg cgttacggca tggtaacgat
     1021 gtgtgtcggc ggcggcatgg gcgccgcggg aattattgaa agactttaaa tgggacgcat
     1081 aggtcgaata tgtcctatgg gacctatcga ttgaatgaaa ggagccgtta tggcagccgt
     1141 actcgaacga aaagaaatca ttaaaggcgg aagcttcctg attgaagagc gcacgccgtc
     1201 tgaagtcttc acccctgagg acttcaacga agagcaccgc atgattgccg acacgacccg
     1261 gcagttcatg gacgcagaag ttctgccgcg catcaacgaa ctcgaggcga aggactggaa
     1321 gcttgcgcgc gagctggtga agcaggcggc ggaactcggc ctggtcggcg cgaatattcc
     1381 ggaagagtac ggcgggctcg ccctggatca aaccagcagc gcgctcatcg cggagtatct
     1441 cggtcgctcg gcttctttcg ccaccaccct cggcgcgcag agcggcattg gcctgctacc
     1501 gattgtctat ttcggtacgg aagccgcgaa gaaaaagtac ctgccgccga ttgccgcggg
     1561 cgaactggtc acggcgtacg ctttgactga agccggttca ggctcagacg cgatggcggc
     1621 caaagccacg gcgaaactca gcgaggacgg cacgcaatac atcctcaatg gcgagaagat
     1681 gttcatcacg aacggcggct tcgcggacat ttacgtcgtg ttcgcgaaag tcgatggcga
     1741 caagttcacc gcgttcatcg tagagcggca ggaaggctgc catcccggcg cggaagagca
     1801 caagatgggc atcaaaggct caagcacgac gccgctgatt ctcgccgatg cgaaaacgcc
     1861 ggttgaaaat ctcctgggcg aagtcggcaa gggtcacaag atcgctttca acattctgaa
     1921 catcggccgc ttcaaattgg gcgcgatgtg tctgggcgga atgaagctcg ccctcacgga
     1981 atcggtgaag tacgcgaacg aacggcatca gttcggcaag ccgatatctt ccttcggcgc
     2041 catcaaatcg aaactcggcg agatggcggt gcggacctgg gtgggcgaag cgatgacgta
     2101 tcgcacgctg ggaatgatcg aagaaggctt gaacgcaatc gaagattcga aagatatgga
     2161 cgcgcgcctg aaagcgatcg aggagtacgc ggccgaatgc tcgatcatca aagtcgcgct
     2221 gtcggaatac tgcgactaca tcacggacga gatggtgcag atctttggcg gctatggata
     2281 ttccgccgat tatccc
//
LOCUS       DATDBY010000164         5877 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1670964, whole genome shotgun sequence.
ACCESSION   DATDBY010000164 DATDBY010000000
VERSION     DATDBY010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5877
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1670964"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1573)
                     /locus_tag="VIT19_03170"
     CDS             complement(<1..1573)
                     /locus_tag="VIT19_03170"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HEY5838009.1"
                     /translation="MHSYRVVWLAFLSAIICITSLAFAKPAYAQDPQQRLVESVDVIG
                     NRRLRKDDILYYVQTRPGDVYNPARVQLDYQALLSLPFFDKVQTRVTEEPGPRGGIIV
                     TFFVVELPIIRDIIFAGLSSVPESDVLKAFREQRVGISKESVYDPVKARNAIRVLKQL
                     LAAKGHPNAVITEEKEEISATSVAITFRVDEGARVRVAEIEFEGSKVFKSGELRSQMK
                     FVKEAGLFSRIKEQDILHREKLDYDLHMVDNYMRSKGYLQARHGEPRIEGLGRRRTGF
                     PILPLPFLSSTDDVLRITVPINEGKLFRLGDLKIEGNSIYSEEFIKAVIGLQKGDIAN
                     GEAISKALYESLKKAYGQQGFIQYTAEIQPTFKDNPQKPEEGVADFLVMIDEGKQFTL
                     RRLEFTGNTFTRDNVLRREVLINEGDIYNQNMFEYSVIRLNQLGYFNPIDKDKDADYR
                     TNEEEALVDITLKVSEKGRQEISFNGGVSGIGGSFFGLHYATNNLFGRGEVLSIDIAA
                     GNRQRSFSFSFTEPYI"
     gene            complement(1903..4278)
                     /locus_tag="VIT19_03175"
     CDS             complement(1903..4278)
                     /locus_tag="VIT19_03175"
                     /inference="COORDINATES: protein motif:HMM:NF019344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEY5838010.1"
                     /translation="MFERYTEKARRVIFFARYEASQFGAPAIEPEHLLLGLMREDKTL
                     TGRFFPRAQITIEAIRREIEGRTLLRERIPTSVELPLAPETKRVLHYSHEESDRLQHR
                     HIGTEHLLLGLLREERSMAAQILFERGLRLNAVRDEIARQSGADARHRKDIPHLLEFS
                     RDLTEDASNDRLDPLIGREPEIERVVQILCRRTKNNPVLIGEPGVGKTALVEGLAQRI
                     VRGEVPSFLENKRILSLDISLIVAGTKYRGQFEERLKQIMRELIDNPQYIVFIDELHT
                     LVGAGSAEGSLDAANILKPALSRGEIQCIGATTPAEFRKSIERDRSLERRFQAVKVAP
                     PSESEAIEILGGVRERYESFHQVHYADDALAAAVIQSSRYIPDRFLPDKAIDVIDEAG
                     ARVKLRVRAEQGSIDALTASLTEWERATYGRAQAPIEEEDPIVVGEVTRGDVEEVIVR
                     WTGIPITSLKEGESKKLLRIEIELHKRVVSQRPAISALARAIRRSRAGLKNPHRPVGS
                     FLFLGPTGVGKTEVARSLAQFLFGSERAMIRFDMSEFMEKHSVSKLIGSPPGYVGHEE
                     GGQLTERVKRSPYAVLLFDEIEKAHTDIFNILLQVFEDGILTDALGNTVDFKNTIIIM
                     TSNIGARFIQKRASLGFQGTADMSRTRMEEMVMSSVRQTFNPEFINRLDEIIVFDELG
                     DPDLLDVLQLQVDQINRTMTNHGFIVRLADDAKRWILDKTCADRSYGARPLRRALQKY
                     VEDPLSEALIQGQLGEASLVEMYVEGGELGFRSIMIDENGVEQPSDLLLTQ"
     gene            4722..>5877
                     /locus_tag="VIT19_03180"
     CDS             4722..>5877
                     /locus_tag="VIT19_03180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838011.1"
                     /translation="MIRTRTAPAVAWLMVTALLLSMSAGFGFTRAANAENSESMPSKN
                     DARALLSAYATDLSAEASQGNIESVQGFESEIDSVIASLANGFAKAPVVIGASDADRA
                     SVARGVALRVASGNVPVNLEGKRVFSLNLDALAKDAKTPSEFNQRIHSVFAAAAATRD
                     EIILFVDQLHQYAGARATAAATATIRSAIAANHLSVIGGASSEAYDAYIGSDDQVASL
                     FETISLDAAESAENTTGLKDKRKRPIKQEFEGEKIAPDMRDLMASAGPNGQVAAIVQV
                     SDVNSRQVRALLTRYGVTVGARMANLGAMKVDLPVEAIDALMKSNSMNYISPDVKVES
                     LGHVTATTGTDQVRNAPGLLAGLLGASAIDGKGIGIAVLDSGLDSSHQAFT"
BASE COUNT         1261 a         1698 c         1625 g         1293 t
ORIGIN      
        1 tgatgtacgg ttcggtaaac gagaagctga agctgcgctg gcgattgccc gccgctatat
       61 caattgaaag cacttcgccc cgaccaaaca gattgttcgt cgcgtagtgc agaccaaaga
      121 acgacccgcc gatgcccgat acgccgccgt tgaatgaaat ttcctgacgg cctttctcgg
      181 aaactttcag agtgatatca accagcgctt cttcttcatt agtgcgatag tcggcgtcct
      241 tgtccttgtc gatcggattg aagtagccaa gctggttcaa ccgaatgacc gaatattcga
      301 acatgttctg gttgtagata tcgccttcgt tgatcagcac ttcccgacgg agcacgttgt
      361 cgcgcgtgaa ggtgttgccc gtgaactcga gccggcgcaa ggtaaattgc ttgccttcgt
      421 cgatcatgac cagaaaatcc gcgacgcctt cctcaggttt ctgcggattg tctttgaacg
      481 tcggttgaat ctccgccgtg tattgaataa agccctgttg gccgtaagcc ttcttcaggc
      541 tttcgtacag cgccttgctg attgcctcgc cgttcgcgat gtcgcctttc tgaagcccaa
      601 tgacggcctt gatgaattcc tcggaataaa tcgagttgcc ttcgatcttc aggtcgccaa
      661 ggcgaaacaa ctttccttcg ttgattggga ccgtgatgcg cagcacgtca tccgttgaag
      721 agaggaaggg caggggcaaa atcggaaagc ccgtgcggcg ccggccgagg ccttcgatgc
      781 gcggctcgcc gtggcgcgcc tgcagataac ccttcgaccg catgtagtta tcaaccatat
      841 gcaggtcgta gtcgagtttt tcgcgatgca gaatgtcctg ttctttaatt cgtgagaaca
      901 gcccggcttc cttcacgaac ttcatctggc tgcgaagttc cccgctcttg aaaactttgc
      961 tgccctcaaa ttcaatctca gccacacgca cccgcgcgcc ttcgtcaacg cgaaaagtta
     1021 tcgccaccga cgtcgccgag atttcttctt tctcttcggt gatgacggcg ttcggatggc
     1081 ccttggcggc cagcagttgt ttaagtacgc ggatcgcgtt gcgagctttg accggatcgt
     1141 aaacggattc cttggaaatg ccgacgcgct gctcacgaaa cgcctttaag acatctgact
     1201 cgggcacgct gctgagtcct gcgaaaatga tgtcgcgaat aatcggcaac tcaacgacga
     1261 agaacgttac gatgatgccg ccgcgcgggc ccggctcttc cgtcacgcgt gtctggacct
     1321 tgtcgaaaaa tggcagcgac agcagggctt gataatcgag ctggactcgg gccggattat
     1381 aaacatcgcc gggacgggtc tgcacgtaat aaaggatgtc gtctttgcgc aggcggcgat
     1441 tgccgatgac gtccacgctt tcaacgagtc gttgttgcgg gtcctgggcg tacgcgggtt
     1501 tcgcgaaagc cagtgaagta atgcagatga tggcgcttag aaaagcgagc caaacaacgc
     1561 gatatgaatg cataggtgcc ggttccctgg aggtctcttc cggatactta ttagtcagtc
     1621 cacctgactt tccagatggg gcaaagcaag agcgctagtt tgtgccattc cacgccgact
     1681 agcaatcggg gttccggcac ttaaattagt tcagcgttta ctgggaaaac cgtaacacaa
     1741 acatggacga cgcgcagcct ggggagcact ttgattcatc gccgccttcg ctcgttgcca
     1801 gttttcaact caacaaagtg gcgcattata ccggcaaaat aaagcgaaag tccaaagtgc
     1861 agcacacttt ggacaataga aacacttgaa ttgcagcttg tcttactgcg tcaggagcaa
     1921 atcgctgggc tgctcaactc cgttttcatc gatcatgatt gagcgaaagc cgagttcgcc
     1981 accctcaaca tacatttcaa ccagcgatgc ctcaccgagt tgaccctgaa tcagagcttc
     2041 cgaaagcgga tcttcgacat atttctggag cgcgcggcgg agcgggcgcg cgccatatga
     2101 gcgatcggcg caggtcttgt cgagaatcca gcgcttcgca tcgtcagcca ggcggacgat
     2161 aaagccgtga ttcgtcatcg tgcggttaat ctgatccact tgcagttgca acacgtcgag
     2221 cagatccgga tcgccaagtt cgtcgaaaac aataatctcg tcgagacgat tgatgaattc
     2281 aggattgaaa gtctggcgca ccgagctcat caccatttct tccatcctgg tccgcgacat
     2341 gtcggcggtg ccttggaaac cgagcgacgc tctcttctga atgaagcggg cgccgatgtt
     2401 cgacgtcatg atgataatcg tgttcttgaa gtcaacagtg ttgccgagcg cgtcggtcag
     2461 gattccgtct tcaaagacct gcagcaaaat gttgaagatg tccgtgtgcg ccttttcgat
     2521 ttcatcgaac agcaacacgg cgtagggcga gcgcttcacg cgttccgtca gctggccccc
     2581 ttcttcgtgg ccgacgtaac ccggcggcga gccgatcaat ttcgaaacgg aatgcttctc
     2641 catgaactcg gacatgtcga agcgaatcat cgcgcgctcg ctgccgaaca gaaactgcgc
     2701 gagtgaccgg gcgacttcag tcttgccgac gccggtgggt ccaagaaaca ggaacgagcc
     2761 gaccgggcgg tgcggattct tcaagcccgc gcgtgagcgt cgaatggcgc gcgcaagcgc
     2821 cgagatcgcc ggtcgctgtg aaacgacgcg tttgtgcaac tcgatttcga tgcgaagaag
     2881 tttctttgac tcgccctctt tcagcgacgt gatggggatg ccggtccagc gcacaatcac
     2941 ttcttcaacg tcgccgcgcg tcacctctcc caccactatc ggatcttctt cttcgatggg
     3001 cgcttgcgca cggccgtacg tagcccgctc ccattcggtt aacgaggcgg tcaacgcatc
     3061 gatgcttccc tgctcagcgc gcacgcgcag cttcactcgc gctcccgctt cgtcgatcac
     3121 gtcgatagcc ttgtccggca ggaaacgatc gggaatgtag cggcttgact ggataaccgc
     3181 cgccgccagc gcatcgtcgg cgtaatgcac ctgatgaaaa ctctcgtacc gttcgcgaac
     3241 gccgcccaaa atctcgatcg cctcactttc ggatggcggt gcaaccttga cggcctggaa
     3301 gcgacgttca agcgagcggt cgcgttcgat cgatttccga aactccgccg gtgtcgtagc
     3361 gccgatgcac tgaatctcac cgcgcgaaag cgccggcttc aggatattcg cggcatcaag
     3421 cgagccttct gccgagcccg cgcccaccaa agtatgcagc tcgtcgatga acacgatgta
     3481 ctgcggattg tcgatcagct cgcgcatgat ttgcttgagc cgctcttcga actgaccgcg
     3541 atacttcgtc cccgcaacga tcaagctgat gtcgagcgag agaatgcgtt tgttctcgag
     3601 gaacgatggg acttcgccgc gcacaatgcg ctgagcgagg ccttccacaa gtgcagtttt
     3661 gccgacgcca ggttcgccga tcaaaaccgg attgttcttt gtgcgacgac agagaatctg
     3721 caccacccgt tcgatctcgg gttcacggcc aatcaacgga tcgagccgat cgttggaagc
     3781 gtcttcagtt aaatcgcgcg agaactcgag caggtgtgga atatctttgc gatgccgcgc
     3841 gtcggcgccg ctctgtcgcg cgatttcgtc gcgcaccgcg ttcaaccgca acccgcgctc
     3901 gaatagaatc tgggccgcca tcgagcgttc ttcgcgcaaa agtccgagca gcaaatgctc
     3961 tgtcccaata tgccggtgct gcaggcgatc agattcctcg tgcgagtaat gcaggacacg
     4021 cttcgtttcc ggcgccagtg gcaattcgac ggaagttgga atccgctcgc gcaacagcgt
     4081 gcggccttca atctctcttc gaatggcttc gatggtgatt tgcgcgcgcg ggaagaagcg
     4141 gccggtgagc gttttgtcct cgcgcatcag gccgagcagc agatgctcgg gctcgatcgc
     4201 gggcgcgccg aactgcgacg cttcgtagcg agcgaaaaaa attacccgtc gcgctttttc
     4261 tgtgtagcgt tcgaacattc gtctaattag ttatgattgc caaagcgtgg cgcccacaac
     4321 ctccacgcgc cggcattata acctaaccac caaaccctaa gaagcttttc aattccgact
     4381 ccatcggtta ccgggtttga tgcgcgcata agcactcgcg cttctccgtc gtaaatttag
     4441 cgatcggttc atcgcggaat cagtgtgcga gatcggatcc tggaggttgg tccctcgacg
     4501 tcgaaccgcc tttccctgcc tgtcggcgag ccagttaagt tgactgcccg tcggtcagcg
     4561 tgacgcaatc gtgattgcac cgcccggccg aacacaaccc ttaaacacct ctgtgctaac
     4621 gacttagctg caagcaatca ggtggcacga ccttcgcaca agtgatcgcg cccgtggagt
     4681 ctgtttcgcg agcgatgttc aggatgacaa ggattgagtc aatgataaga acacgaactg
     4741 cccccgcagt tgcctggctg atggtcacgg cactactgct ttcgatgtcc gccggtttcg
     4801 gcttcacccg agccgcgaac gcggaaaact cagaatccat gccttcaaag aatgatgcgc
     4861 gcgccctgct ttccgcgtat gccacggatc tttccgccga agcgtcgcaa ggaaacatcg
     4921 aatccgtcca gggcttcgaa tctgaaatcg acagcgtcat cgccagcctg gcgaacggat
     4981 ttgcgaaagc gccggttgtg attggcgcct ctgacgctga tcgcgcgtcg gtcgcacgcg
     5041 gcgttgcatt gcgtgtcgcg tccggcaatg ttcccgtgaa cttggaggga aagcgggtat
     5101 tcagcctgaa cctcgacgcg cttgcgaagg acgcaaagac gcccagtgaa ttcaatcaac
     5161 gcattcattc cgttttcgcc gctgccgcgg ccacccgtga cgagatcatt ctcttcgtcg
     5221 atcagttgca tcagtacgcg ggcgcgcggg ccacggccgc agccaccgcg acgattcgat
     5281 ccgcaatagc tgcgaaccat cttagcgtca tcggtggagc cagttccgaa gcctacgacg
     5341 cctacatcgg ctccgacgac caggtcgcaa gcctttttga aacgatatct cttgacgcag
     5401 ctgaatctgc tgaaaacaca accggcctca aagacaagcg taagcgccca atcaagcagg
     5461 aattcgaagg cgagaagatc gcccccgaca tgcgcgactt aatggcatcc gcgggaccga
     5521 atggccaggt ggctgcaatt gtgcaggtca gtgatgtcaa cagtcgccag gtgcgcgctc
     5581 tgttgacgcg gtatggcgtt accgtcggtg ctcgcatggc gaacctcggc gcgatgaaag
     5641 tcgatctgcc ggtagaagca atcgatgcgc tcatgaagag caactcgatg aattacatct
     5701 ctccggatgt gaaggtggag agccttggcc acgtcactgc gaccacggga accgatcagg
     5761 ttcgcaatgc gccgggacta ctcgccggtt tgctgggtgc gagtgccatc gatggaaagg
     5821 gcatcggcat cgcggtgctg gactcagggt tggattcaag ccaccaggca ttcacct
//
LOCUS       DATDBY010000165         4469 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1465021, whole genome shotgun sequence.
ACCESSION   DATDBY010000165 DATDBY010000000
VERSION     DATDBY010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4469
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1465021"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..854)
                     /locus_tag="VIT19_03185"
     CDS             complement(<1..854)
                     /locus_tag="VIT19_03185"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY5838012.1"
                     /translation="MIGQTIGSFKITHKIGAGGQGTVYKATDSKLGRAVVIKVLPPEL
                     TGKDTNLKRFDREARLASSLDHPNICTIFDLGEQDGMHYIVMQHVEGRNVRQLVNGRP
                     LELDSALRIAIQVTDALTAAHARGIIHRDIKSGNVMVTDSGQVKILDFGLAKLLDENE
                     QGGGADRIELTEVGVPYGTATYAAPEQARGDKVDSRADVFSTGVLLYEMLTGTWPFRG
                     KTTVEVRYAVMNAAAKPLAEARPGPLPVQLQQILDKAMAKDPRDRYQKISELRDELRK
                     VLQQVSSG"
     gene            1222..>4469
                     /locus_tag="VIT19_03190"
     CDS             1222..>4469
                     /locus_tag="VIT19_03190"
                     /inference="COORDINATES: protein motif:HMM:NF013395.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HEY5838013.1"
                     /translation="MITTFLLVSMIAVGTFGVHLIRRAQANNTAQTLPFSQNWTNTGQ
                     ITANDNWSGVAGIEGYFIRNDGTTATGVDPQTLTGDTYLGAGAPELDVTANQTNPNAV
                     AAPGGVLEFEQTLQAAPANTNPVIAVNGSGTADAPFILINLNTTGQSNLSVSYNLRDL
                     DCSADNAAQSVALMFRVGNSGSYTNLATGFVADATSRPIAATDIANCTQVTPVNVALP
                     PAADNQPLVQVRVITTNAGGNDEAVGIDDISITGSIVVLPTNPSGSGSANPSSVVSGN
                     STLLTVNVTPGANPPSTGLAVTADLSTIGGNNPQTFYDDGSNGDVTPGDNIFSYFATV
                     TLATAPGPKSLPFTITDAQVRSGSGSISLTVQAPPPPSDHVVISQIYGGGGNTLATYK
                     NDYVELYNPSPTTFNLNGWSIQYASAAGNVSSVVPLAGPINSGEYYLIKLGTNGAVGL
                     DVPPANVENTGVNISATNGKIALVNNSVALSGTCPTGDPDLVDYVGYGSANCREGTAN
                     APAGSNTTAVLRKANGAQDTNQNGDDFATGAPNPRRTAIILDSPPTVAAIDTDSDPGA
                     STPAPKDGSVAVFFSEDVEVNGTWYDLTCANTGSHTAVIYAGPKNWIVTPDVNFEPGE
                     QCTFTVLASQVNDADTDDSQPNTDFMQANFVAMFTVATGAPLPYDASVHLAMGNPSGA
                     VNDTGQPNNYLLSKAELALSYNRDRGGPNWVSWHLTDEWDGTLTRVDTFRPDPQLPAS
                     WNRVHQFDYTGSGFNRGHMVPSADRRATLPMNQATFLMDNIIPQAPDNNQFTWNNMEQ
                     DLRAYTPANELYIISGGAGIGGSGDNGPASTIADGKVTVPAQIWKVALVIPKGENDIS
                     RVDCSSRTIAVIVPNTNDTNPDWTTYLTTVDAVEALTGYDFFSNLPEPIQRCVEAGIN
                     GNNPPLDTDNDTVPDSSDNCPFVVNTDQANNDGDAQGDACDADDDNDGTLDTDEAACG
                     SDPLNGASTCEVCDGIDNDLNEGVDEGFPNNDNDGLADCVDPDDDNDGVPDGDDNCPF
                     VANADQADADQDGIGNVCDAQTGPPTKDQCKNGGWQFFNYPRTFQNQGDCIQ"
BASE COUNT         1026 a         1285 c         1213 g          945 t
ORIGIN      
        1 tcgcctgacg aaacttgctg aagaactttt cgcagctcat cgcgtaactc ggaaattttc
       61 tgataacgat cgcggggatc cttggccatc gccttgtcca gaatctgctg aagttgcacc
      121 ggcaaaggtc cggggcgcgc ttcggccaaa ggtttggcgg cggcattcat cacggcgtac
      181 cggacttcca cggtcgtctt cccacgaaaa ggccaggtgc cggtcagcat ttcgtaaagc
      241 agaaccccgg tcgagaaaac gtcggcgcgc gaatcgactt tatcgccgcg cgcttgttcc
      301 ggagcggcgt aggtcgctgt gccgtacggt acgccgacct cagttaactc aatgcgatca
      361 gcaccgccac cctgttcgtt ctcatcgagg agcttcgcta aaccgaagtc gagaattttc
      421 acctggcctg aatcagtgac catgacgttg ccggatttga tgtcgcgatg gatgatgccg
      481 cgcgcgtgcg ctgctgtcag ggcatctgtc acctgaatgg caatccgcag cgcgctgtcc
      541 aactcgagtg gtcgtccgtt tacaagctga cgcacgttgc gaccttcgac gtgctgcatc
      601 acgatgtaat gcattccatc ctgctcgccg agatcgaaaa ttgtgcagat gttcggatga
      661 tcaagcgaag aggcgagacg cgcttcacga tcgaaacgct tcaggtttgt gtctttacca
      721 gtgagttccg gcggcaggac tttgatgacg acggcgcggc cgagcttcga gtcggttgct
      781 ttgtagacag tgccctggcc gcctgcgcca atcttgtgcg tgattttgaa gctgccgatg
      841 gtttggccga tcatggtttt tcgcgtgcgt atttaactct caaacagaag ctggcgcaag
      901 acgatcgggc acaaaacatt gatgtatgaa gagtcgcagc ggagtaggtt cgtcaattgg
      961 ccctaattcg gccaagtcat tcgacttagt aaaggttgta aaaacttgac cccgctaatg
     1021 aatgctggta aaaacgtcgc ttcgttcctg ccggttttgt cttctgacct ccggtattcc
     1081 tgcgattagc aacatatttt ccgtttgttt agaaaggccc ctatgaactt gaaaactaac
     1141 cgccgctcgc ggcaacgcac ccgtccgctc ttcggtttga ccgcaacatc aatcggacaa
     1201 cgctcgcgat cgaaacgagc gatgattact accttcttac ttgtatcgat gattgcagtc
     1261 ggcacgttcg gggtgcactt gattaggcga gctcaagcga ataacaccgc tcagacgctg
     1321 cccttctcac aaaattggac aaatacaggg cagattacag cgaacgataa ctggtctggc
     1381 gtggcgggaa tcgagggtta ttttatccgc aacgacggta cgaccgccac cggcgttgat
     1441 ccgcaaactc tgacggggga cacctacctc ggagccggtg ctccggaatt agacgtaact
     1501 gccaatcaaa cgaatccaaa tgcggttgcc gctcctggcg gggtccttga gttcgaacag
     1561 acgctgcagg ccgcgccggc gaacaccaac cccgtaatag cggtaaatgg gtccggtact
     1621 gctgacgcac ctttcatact tattaatctc aacactacgg gacaatcgaa cctcagcgtg
     1681 tcctacaacc ttcgcgacct ggattgctcg gccgacaacg cggcgcaatc tgttgcattg
     1741 atgtttcgtg ttgggaactc cggcagttat acgaacctcg ccaccgggtt cgttgcggac
     1801 gcaacgtctc ggcctattgc agccaccgac attgcaaatt gcacgcaggt tactccggtc
     1861 aatgtcgcat tacctccggc ggctgacaat caaccgctcg tgcaggttcg tgtcatcact
     1921 accaacgcgg gcggcaacga cgaagcggtg ggcattgatg acatctccat caccggatcg
     1981 attgttgtcc tgccgacgaa tccaagcggc agcggttcgg ctaatccgag tagtgtagtc
     2041 tcgggcaatt caactttatt gaccgttaat gtaacgccag gcgccaatcc accgagcact
     2101 ggcttggcag tgacggcgga tctgtcaacc atcggcggga acaacccgca aactttttac
     2161 gatgacggga gcaatggaga cgtcaccccc ggcgataata tcttctcgta cttcgccacc
     2221 gtgacgctgg caaccgcacc cggtccgaag tctcttccgt tcacaatcac ggacgcacaa
     2281 gttcgttccg gcagtggctc gatcagcttg accgtgcaag cgcctcctcc gccttcggat
     2341 cacgtcgtga ttagccagat ttacggcggc ggcggcaaca ccttagcgac ttacaagaat
     2401 gattacgttg agctgtacaa cccgagtccg acaaccttta acctgaatgg ttggtcgatt
     2461 cagtatgctt ccgcggccgg caacgtaagc tcagtggttc ctctcgcggg gccaatcaac
     2521 tcgggtgagt attacctaat taagctgggc acaaacggag cggtgggtct cgacgtgcct
     2581 ccggcgaacg tcgaaaacac cggggtcaac atcagtgcaa ccaacgggaa gattgccctg
     2641 gtaaataatt cggtcgccct gtccggtact tgtccgactg gtgatccgga cctggtcgac
     2701 tatgttggct acggcagcgc aaactgtcgc gagggaaccg ccaacgcacc cgcgggtagc
     2761 aacaccaccg ccgttctccg aaaagccaac ggcgctcagg acacaaatca aaacggcgat
     2821 gacttcgcaa ccggagcacc gaatcctcgc cgcactgcga tcattttaga ttcgcccccg
     2881 acggtcgcgg ccatcgatac cgactctgac ccgggggcgt ccacgcctgc gccgaaggac
     2941 ggcagcgtcg ctgttttctt tagtgaggac gtggaagtca acggcacgtg gtacgacctg
     3001 acctgcgcca ataccggcag tcatacggcc gtaatttatg ccgggcctaa aaactggatc
     3061 gtaactcccg acgtcaactt cgagcccggc gaacaatgta cgttcacggt cttggcctca
     3121 caagtcaacg atgcggacac cgacgatagc cagccgaata ccgatttcat gcaggctaat
     3181 ttcgtcgcaa tgtttacggt tgcgacgggt gcgccacttc cgtatgacgc gagcgttcat
     3241 ctggcaatgg gtaacccaag tggagcggtc aacgataccg gacaaccgaa caattatctg
     3301 ctgtcgaaag cggagttggc tctttcgtat aaccgagatc gcggcggccc gaattgggtg
     3361 agttggcacc ttaccgatga gtgggacggg actctaactc gagtcgatac attccgtccc
     3421 gatccgcaac ttcccgcctc ttggaaccgc gtgcatcagt ttgattacac cggctcaggc
     3481 ttcaaccgcg gccacatggt tccttcagcc gatcgacggg caacgctgcc aatgaatcag
     3541 gcgaccttcc tgatggataa catcattccg caagcgcccg ataacaatca gtttacctgg
     3601 aacaatatgg aacaggatct gagggcttac acgccggcaa atgagttgta catcatctcc
     3661 ggaggcgcgg ggataggtgg cagcggtgac aatggcccag cgtcaaccat agctgacggc
     3721 aaagttacgg tgccggcaca aatctggaag gtcgcgctgg tgattccgaa gggcgaaaac
     3781 gacatatccc gcgtggactg ctcttcccga accatcgcgg tcatcgtgcc caacacgaac
     3841 gacaccaacc ctgactggac aacttacctg actactgtcg acgcagttga agctttaact
     3901 ggctacgact tcttctcaaa cctgcctgag ccgattcagc gatgcgtcga agcgggcata
     3961 aacggcaaca acccgccgct ggacactgac aatgacactg tccccgacag cagcgacaat
     4021 tgtccgttcg tggttaacac cgaccaggca aataatgatg gcgatgccca aggtgatgcc
     4081 tgcgacgccg acgacgataa cgacggcacc ctggacaccg atgaggcagc ttgcggttcc
     4141 gatccgctaa acggggcatc gacctgcgaa gtttgcgacg gcatcgacaa tgacctgaat
     4201 gagggcgttg acgaaggttt cccgaacaat gataacgacg ggttagctga ttgcgtcgat
     4261 ccggatgatg acaatgacgg cgttcccgat ggcgacgaca actgcccgtt cgtggctaac
     4321 gccgaccaag ccgatgcgga tcaggacgga atcggaaacg tctgtgatgc ccaaaccggc
     4381 ccgccgacca aggaccaatg caagaatggc gggtggcagt tcttcaacta tccgcgtacg
     4441 ttccagaatc agggagactg tattcagta
//
LOCUS       DATDBY010000166         2567 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1664198, whole genome shotgun sequence.
ACCESSION   DATDBY010000166 DATDBY010000000
VERSION     DATDBY010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2567
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1664198"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2567
                     /locus_tag="VIT19_03195"
     CDS             <1..>2567
                     /locus_tag="VIT19_03195"
                     /inference="COORDINATES: protein motif:HMM:NF015140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007154 - cell communication [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Calx-beta domain-containing protein"
                     /protein_id="HEY5838014.1"
                     /translation="LTANDVAPDSDSGPNALQNFPVIQSAVVGSPNLIAGTLNSAANQ
                     TFTIDLYANPACDASGNGEGQTYLGSTTTTTDSNGLGGWRFSPATLNLSDQITATATS
                     VASNTSEFSQCFTPRAFAAGQLQFVQTVITDPETNAGSHPITFTVQRTGGSDRAASVN
                     YTISGTATTADNDYSVSSATGTLQWPNGDMTDRTITITVNGDTKFETDETVQVVLSSP
                     VGASINGPDTATLTITNDDTQPTISIDDITLNEGNAGTTNFNFTVSLSNLSYQTITVD
                     AQTAAGPVVTANVDYNSVGSTTLTFTPNTPTQTFQVQVNGDTAFESDETFFVNLSGAT
                     NATIADNQGVGTITNDDVCVPPGTVYVDDDWAGTTIGVDPDAGGPATAFGCDSFATIQ
                     GGVDGVQSGGNVIVFAGTYAENVLVNKSATLSGPNAAIDPNTGSRVTEAIVLPAATAT
                     SLQGSTSGTVFRVGTIAGHIDVTIKGFKIDGHNASLTSGRVLNGVEVHTGAGIITSTG
                     SFDDETSGYDATTVVTNNIIQNLERYGVYLSGVNSGAQVLAGNNVGNNKIDNLPSGNN
                     FGGGRGQGIGFGWNVYGSAAFNVMTRVNVGWSDANHYQASTGAATVVSNNEIRAYHRG
                     IFHSLQYGNASTATISDNNIFAETNGDFPASSTNFGIELSSISSAVDVVVTNNNSTGN
                     VYGILLWNLPTTATITVSGGTLTNNFYGIHATNDDPQFGAVSTATSAQVSGVTITGAT
                     EGGIGVLDSTTVAATGTVALEVFGDTSITSSAIGVLVQGADASANIHDNSASIHGNTT
                     GIKVDGGSATITSNNLYNNGTSLDLANSPTVTAHFNRFISNTTAINNPGNATVDLEK"
BASE COUNT          583 a          790 c          721 g          473 t
ORIGIN      
        1 ttgaccgcca atgatgttgc gcctgattcg gacagcggcc cgaatgccct gcagaacttc
       61 ccggtcatcc agtccgcggt cgtgggtagt cccaacctga tcgccggaac cttgaactcc
      121 gcagccaacc agaccttcac gatcgatttg tatgcgaacc ctgcttgtga cgcgtcaggt
      181 aatggtgaag ggcagaccta tctgggatcg acaaccacga ccaccgattc caatgggctc
      241 ggcgggtgga gattcagtcc ggcgacgctc aatctgagcg atcagatcac agcgactgct
      301 accagcgtcg ccagtaacac ctctgaattt tcacagtgct tcacgccgag ggccttcgcc
      361 gccgggcagc ttcagttcgt ccaaactgtt attaccgatc cggaaacgaa tgccgggtcg
      421 cacccgataa ctttcacggt ccagcggacg ggcgggtctg atcgcgccgc ctcggttaat
      481 tacacgatca gtggcacggc gacgaccgct gataatgact attcagtcag ctcagccacg
      541 ggaacactcc agtggccgaa cggggacatg actgaccgca ccatcaccat cacggtgaat
      601 ggcgatacta agtttgaaac ggacgagacg gtgcaggtcg tgctttcgag tccggtgggc
      661 gcgtcaatta atggccccga cacagccacg ctgacgatca ccaacgacga cacgcagccc
      721 acgatctcga tcgacgacat cacccttaat gaagggaatg cgggcacgac caactttaat
      781 ttcacggtca gtctgtcgaa cctgtcttat cagacaatta ccgtcgacgc gcaaactgcc
      841 gccggccccg tggtgaccgc gaatgtggac tacaactcgg tcggcagcac aacgctaacg
      901 tttacgccca acacgcctac gcagaccttc caggtgcagg tcaacggcga cacggccttt
      961 gagtccgatg aaactttctt cgtcaacctc tcgggcgcga caaatgcgac gattgccgac
     1021 aaccagggcg tcggcacgat cacgaatgat gacgtctgcg tgccgccggg tacggtttac
     1081 gtcgacgatg actgggccgg tactacgatc ggagtcgatc ctgacgccgg cgggccggcc
     1141 accgcgtttg gttgcgattc gtttgcgacg attcaaggcg gcgtggacgg cgtgcagtcc
     1201 ggcggcaacg taattgtctt tgccggcacg tatgccgaga acgttttggt gaacaagtca
     1261 gccacgctca gcggccccaa cgcggccatc gatcccaaca cgggcagccg cgtcacggaa
     1321 gcgatagtgc ttccggcggc caccgcaacg tcccttcaag gctcaacgtc gggaaccgtg
     1381 ttccgcgtcg gcacgatcgc cggacacatc gacgtgacca tcaagggctt taagattgat
     1441 ggccataacg cgtcgctcac cagcgggcgc gtgctgaacg gcgtcgaagt ccacaccggc
     1501 gcaggcatca tcaccagcac cggctcgttc gacgatgaga cgagtggtta cgacgcaacc
     1561 accgtagtga cgaacaacat cattcagaac ctcgaacgtt acggcgttta cctctccggc
     1621 gttaattccg gggcccaggt tttggccggt aacaacgtcg gcaacaacaa gattgataat
     1681 ctgccgtccg gaaacaactt cggtggggga cgcggacagg gcatcggttt cggctggaac
     1741 gtctacggta gcgccgcatt caacgtgatg acgcgggtga acgtcggctg gtcggatgcg
     1801 aatcactacc aggcttcgac cggcgccgcg accgtggtgt cgaataacga gatccgcgca
     1861 tatcaccgcg gcatcttcca tagtctgcaa tatggaaatg ccagcacggc caccatctct
     1921 gacaacaaca tcttcgcaga gacgaacggc gacttcccgg cctcgtccac gaacttcggt
     1981 atcgagctgt cttctatctc aagcgcggtc gatgtagtcg tgacgaacaa caactcgacc
     2041 gggaatgtgt acggcatact gctttggaac ctgccgacga ctgcgaccat aaccgtttcg
     2101 ggcggaacgc tgaccaataa tttctatggc atccatgcga cgaacgacga cccgcagttt
     2161 ggggccgttt cgacagccac cagcgcccag gtgagtggcg ttacgattac cggcgcgacg
     2221 gagggcggca tcggtgtctt ggactcgacc acagtggcgg cgaccgggac cgtagcgctg
     2281 gaggtattcg gcgacacttc gatcacaagt tcagcgatcg gcgtgctggt acagggcgcg
     2341 gacgcgtcag ccaacatcca cgacaacagc gcctcgattc acggcaacac gactggcatt
     2401 aaggtcgatg gcggatcagc aacgatcacc agcaacaacc tctacaacaa cggcaccagc
     2461 ctggatctcg ccaattcgcc aaccgtaaca gcgcacttca accgtttcat ctcgaacacg
     2521 acggcgatca ataatccggg caacgcgacc gtcgatctcg agaagaa
//
LOCUS       DATDBY010000167         2043 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_989820, whole genome shotgun sequence.
ACCESSION   DATDBY010000167 DATDBY010000000
VERSION     DATDBY010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_989820"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            152..>2043
                     /locus_tag="VIT19_03200"
     CDS             152..>2043
                     /locus_tag="VIT19_03200"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5838015.1"
                     /translation="MSSPNDHASQSEAETTKALANLLKDTARLDDYNIKLRVLDQPQS
                     LSIETGAGIIPETLTGKVNYAALETNRAVAQPYLSYLVNSIRRDTRATPYSIVTGVSR
                     ETFESLQQGKPEHRLRCDEITTDLPAIILNEWAAKDLGAKLKDRLTLDYYVWLDQGQL
                     VTRSTEVQVACIVPIEGLAADRNLVPDYPGITESENVADWDPPFPMDLDRIRPQDEEY
                     WKKYRTTPKAFLLLEFAQKLWQSRYGNLTSLRINPGPSQDFALLGSAFDKNLRRTLEP
                     AEMGLAILPVRAEGLAASRGATDFGEYFLYFSFFLVVSALLLASLFFKFGIEQRLREI
                     GTLQAIGFPRSKIRNLFLAEGLVLSLVGSLLGLLGAVAYGYVILFGLRTWWVDAVGTT
                     QLRLHVSALSLLIGGIGGVLAAAICIAWTLRRLGKASSRSLLSGVLISASPSLPVPAS
                     VSVAASPRFRDSPSASWRLWISIALTAFAVLILVAATFQVISQTLGFFGSGTLLLIAL
                     LYFVSAWLRRPRRKTIRGRGWPAVWRLGFRNAVHRPSRSVMCIALIAMSAFIVVTVEA
                     FRKGDQDLSRDRKSGTGGFPLMAESLLPLVHDPNSAPGREALNIANDVTGSAFSSAAF
                     TRFRLRP"
BASE COUNT          418 a          579 c          563 g          483 t
ORIGIN      
        1 gttgcggctg acgattcgag aggcccttgc acctgcccag ttgggcgagt tcagcacgcg
       61 tcctcagcaa agcagcgtgc gcgccgtgtt cgtcccacta cagcttctcc aacaagaact
      121 ggagcaacaa agccgagtta acactatcct cgtgtccagc cctaacgatc atgcaagtca
      181 atcagaggcc gaaacgacaa aggcgctagc gaacttactc aaagacactg ctcgtttaga
      241 tgactacaac atcaagctgc gcgttttgga tcaaccacag agcctgtcga tcgagaccgg
      301 agctgggatc attcccgaaa cacttacggg aaaggtgaac tacgcggcac tggaaacgaa
      361 tagggccgta gcgcagccat atctatccta tctcgttaac agcatccggc gagatacgcg
      421 cgcaacccct tactcgattg tgaccggcgt cagccgcgag acatttgaga gcctccaaca
      481 gggtaagccg gagcatcgat taaggtgtga cgaaataacg acggacctcc cagccattat
      541 tttgaacgaa tgggcggcga aggatctcgg tgcgaaactc aaagatcggc tcacgctcga
      601 ttactacgtc tggcttgacc agggccaact cgtgacgcgt tcgaccgagg ttcaagtagc
      661 gtgcatcgtt ccgatcgagg gtctcgcagc ggatcggaat cttgtccctg attacccagg
      721 cattactgaa tcggaaaacg ttgctgattg ggatcctcct ttcccaatgg atctggatcg
      781 cattcgccct caggatgagg agtactggaa aaagtatcgc acgacgccga aggccttcct
      841 cttgcttgaa tttgcacaga aactttggca atcacgatac ggtaacctga cgtcgctgcg
      901 cattaacccc gggcccagcc aggattttgc gctgctgggg tcagctttcg ataagaacct
      961 gcgccgaact cttgagccgg cggaaatggg tcttgcgatt ctgccggtac gcgccgaagg
     1021 actggcggca tcgcgcggcg cgactgattt cggcgagtac tttctttact tcagtttctt
     1081 tctcgtcgtc tctgccctac tgctggcatc actctttttt aaattcggaa ttgaacaacg
     1141 cttgcgtgaa atcggcacac tgcaagcgat cggctttcct cgatcgaaaa ttcgaaatct
     1201 ctttctggct gaagggctgg tcttatctct cgttggaagt ctgctcggtt tgctcggcgc
     1261 ggtagcgtac ggctatgtga ttctgttcgg cctgcgcacc tggtgggtgg acgcggtggg
     1321 gaccacgcag ttgcgtcttc acgtctcggc attgtcactt ctgattggcg gaattggcgg
     1381 tgtgctggcg gcagcgatct gcatcgcatg gactctgaga cgtctgggaa aagcgtcctc
     1441 gcgatctctc ttgagcggcg ttctcatctc cgcgtcgccg agtctccccg tccccgcgtc
     1501 ggtttcagtt gccgcgtctc cgcgtttccg cgactccccc tcagcgagtt ggcgtctctg
     1561 gatctcaatc gccctcacgg cctttgcggt gctgatcctg gttgcggcga cattccaggt
     1621 aattagccaa accctgggtt tcttcggcag cggtacgctc cttctcatag cattgcttta
     1681 tttcgtgtcg gcctggttga ggcggccgcg gcgcaaaaca attcgcggaa ggggttggcc
     1741 ggcagtctgg cggctgggat tcagaaacgc cgtacatcgc ccatcgcgaa gcgtaatgtg
     1801 cattgctctg atcgcgatgt ccgcgttcat cgtcgtaact gtcgaagcat ttagaaaagg
     1861 tgatcaggac cttagtcgag acaggaaatc cggtactggc ggattcccgc tgatggctga
     1921 atcgctcttg ccacttgtgc acgatccaaa ctcagctccc ggacgggaag cattgaacat
     1981 cgcaaatgac gtgactggct cagctttttc cagcgctgct ttcacgcggt tccgtctgcg
     2041 ccc
//
LOCUS       DATDBY010000168         6798 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2059635, whole genome shotgun sequence.
ACCESSION   DATDBY010000168 DATDBY010000000
VERSION     DATDBY010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6798
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2059635"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..5286)
                     /locus_tag="VIT19_03205"
     CDS             complement(<1..5286)
                     /locus_tag="VIT19_03205"
                     /inference="COORDINATES: protein motif:HMM:NF021596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HEY5838016.1"
                     /translation="MIRIFRRRSNDSGEPPIREELFSVERLEQYAGELAAQHTIADTP
                     QRGSLLLPRLEQNGRKLVETYNALAESIRSEHVISPAAEWLVDNFHIVEEQIREIRED
                     LPKSYYDELPKLAEGAFKGYPRIYALSVALVAHTDSYLDSETLRRFINGYQKVAPLSI
                     GELWAVPITLRLALVENLRRLATRIVSSRAEREEADKLADTLLETAQLNPQEIVPLIS
                     GRLGKRKTLGRAFVVQLMQRLREQDPAVLPAVEWLEMQLHKLNLSIHDIVHEEHRRQA
                     SAQVTVGNIITSMRLLSTLDWRDFFETVSLIDRELAKDPAGIYSRMDFATRDRYRKVV
                     ERIGKRAKVRELDVARAALRLAEAAPTDGQESTQAHIGYFLIGRGLGQLESETSYRPL
                     VGERLERWTLRHATFFFLGSLTLLTALILAVIAVAVFRAQPHPVGVVLAVFLALLPAS
                     DLAISILNWGITHSYRPRLLPKLDLSKGLPPEARTIVVVPVILSDVATVEEIAEKLEI
                     TYLGNQDEHIHFAILGDFADAASETMPGDKEIVTAALDRIAALNKRYNGVHPGRFNYF
                     HRRRQWCETENSWIGWERKRGKLREFNQLLLGATDTSFTITTAGDELLSQIRYVITLD
                     ADTQLPRETAHRLIGTAIHPLNLPRFDAAEDRVTEGYSIFQPRVSISLESASRSTFAR
                     IFSGNTGVDPYTTAASDVYQDLFGAGIYTGKGLYDVKAFEQALHERVPEQTLLSHDLF
                     ESIFARTALVTDIEFLDDYPAYYDSFARRQHRWTRGDWQIADWLFGTVRDAHGDKRPN
                     RIPAISRWQILDNFRRSLLAPSIVLLLIAGWTVLPVSAWWWELFVLLTLAFPVYAHVT
                     SGLLIHPRGVPWTSHFWSVWGDARTNTAQIAVEIVFLAHQAWLMMDAIARTIYRKFVS
                     QRHLLEWVTAASSEASSKHDLPAFIRFMWPAEVVVLVAIALIVLSNVASLPAAAVFLV
                     AWAASPVIAFVISRRRAEVALSLNAKDLRTIRIVARRTWRFFETFVGDEDNWLPPDNF
                     QEDPRPVVAHRTSPTNISLLWLSTVAAYDFGYVGVIELVERLEKTFASQQRLQKFRGH
                     LLNWYDTRTLEAMWPHYVSTVDSGNLAACLLALKQTCLEIPDDQLFGSRVLNGLGDTL
                     AGLRQEMSQLTTARKRTDAISMKQLMQELDAGAELLALPEPQSLAEWGDLLERFNEQA
                     ATIDDTVAALSHVHPSGEIDELHWWSGALLLQAGNWLRDFRLLVSESDPAPAPQATLA
                     SSSDQATEAAKDISSRLAKIASTCQRLFDEMDFKFLLEQERKVFTVGFNVSEGRRDNS
                     FYDLLASEARLASFVAIAKGDVPQEHWFRMGRQLTSVNGGRALISWTGTMFEYLMPLL
                     VMRDYRATLLGETYDAIVMRQIEYGAERGVPWGISESAYAARDLQLNYQYGPFGVPGL
                     GLKRGLIEDLVVSPYATILASQVKPVEAIENLRALERAGALARYGFYEALDYTPERVK
                     KGEPCTPVRAFMAHHQGMSLVALDNLLNQNTTQNRFHNDPQVQATELLLQERVPRGVP
                     AAHPRAEEVLSGRVVRTLTGLVTRAYDTADLPTPRTQLLSNGTYTLMITTAGSGYSRS
                     GPLAVTRWREDPTRDHWGSFIYVRDLRSGAVWSTGHQPIPAKAQDYEVAFSEDKADFW
                     RRDSGIVTHMEVIVSAEENAEMRRVSVTNFGNRPREIELTSYSEIVLAPQASDVAHPA
                     FSNLFVETEFQGRHNTLFARRRPRSSEDKPVWGVHV"
     gene            complement(5540..6076)
                     /locus_tag="VIT19_03210"
     CDS             complement(5540..6076)
                     /locus_tag="VIT19_03210"
                     /inference="COORDINATES: protein motif:HMM:NF021384.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2085 domain-containing protein"
                     /protein_id="HEY5838017.1"
                     /translation="MAFDRNSSHLLILTLAVFSVSAIIAFVVIAAIVAAPVAHANGYP
                     AFAAAIYKAFSYLCHQIPERSFHLAGHPFAVCSRCTGLYAGFAFATLAWPLARSLKRT
                     DTPHVIWLLLSGVPLAIDFGLTYFEIWENNHFTRVTTGALFGAVAAIYVVPGLIELSM
                     NVQRRFKSEPPAVAGDLE"
     gene            complement(6104..>6798)
                     /locus_tag="VIT19_03215"
     CDS             complement(6104..>6798)
                     /locus_tag="VIT19_03215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838018.1"
                     /translation="TPESCPCLDFDWGTCPSNCLGPVDYCANGYGGCPPVPGVMKTAC
                     ECYRPSPVLIDVNGNGFNLTDAANGVDFDINGDGILERLSWISAESDDAWLVLDRNGN
                     GFIDNGSELFGSFSPQSAPPPGEEKNGFLALAEYDKPQNGGNADGTLTTADLVFSSLR
                     LWQDTNHNGISESSELHTLPDLGLSAIYLDYKLSKRVDSYGNEFRYRAKVKDIHGAQI
                     GRWAWDVFLMGQ"
BASE COUNT         1504 a         1985 c         1950 g         1359 t
ORIGIN      
        1 cacgtgcacg ccccaaacgg gcttgtcttc cgaagagcgg ggccgccggc gcgcaaacag
       61 agtattgtgc cggccctgga actcagtctc gacgaaaaga ttgctgaacg cgggatgcgc
      121 cacgtcgctg gcctgcggcg cgagcacaat ctcgctgtag ctggtcagtt cgatctcacg
      181 cggacggttt ccaaagttcg ttacggaaac acgtcgcatc tcagcgttct cctcggctga
      241 gacgatcact tccatgtggg tgacgattcc tgaatcgcgc cgccaaaaat cggccttgtc
      301 ttcagagaat gcgacttcat agtcctgggc tttcgccggg atcggctggt gaccggttga
      361 ccagacggcg ccgctgcgaa ggtcacgcac gtagatgaaa ctgccccagt gatcacgcgt
      421 gggatcttct cgccaacggg tcacggccaa aggtccggat cgcgagtagc cgctgccggc
      481 agtcgtgatc atcagcgtgt aggtcccatt tgagagcaac tgcgtgcgcg gggtcggcaa
      541 atctgccgtg tcgtacgcgc gcgtcaccaa acctgtgagg gtgcgtacta ctcggcccga
      601 caaaacttct tccgcgcgcg gatgcgccgc cgggacaccg cgcggcacgc gctcctgcaa
      661 gagcagctca gtggcctgca cctgcggatc gttgtgaaag cgattctggg tcgtgttctg
      721 gttcagcaaa ttgtcgagtg cgaccaggct catgccctga tggtgcgcca taaaagcgcg
      781 taccggcgtg cagggctcac ctttcttgac gcgttcaggc gtgtaatcca gcgcttcata
      841 aaacccatag cgtgccagcg cgcctgcacg ctcaagcgcg cgcaggtttt caattgcctc
      901 aaccggcttt acctgtgacg cgagaatcgt tgcgtaaggc gaaaccacca ggtcttcaat
      961 caagccgcgt ttcaaaccta aaccgggaac accgaacggg ccgtactgat agttaagttg
     1021 caggtcgcgg gcggcgtacg cggattctga aatgccccag ggaacgccac gttcagcgcc
     1081 atactcgatc tgccgcatca caatggcgtc ataagtttcg ccgagcagcg tcgcgcgata
     1141 atcacgcatc acgagcagcg gcatcaggta ttcgaacatg gtgccggtcc aggaaatcag
     1201 cgcacggccg ccattaaccg acgtaagttg gcgacccatg cgaaaccaat gttcctgcgg
     1261 cacgtcgcct ttggcgatcg cgacgaagct ggcaagccgg gcttccgaag ccagcaggtc
     1321 atagaacgag ttatcgcgcc gaccttccga gacgttgaag ccgacggtga aaacctttcg
     1381 ttcctgttcg agcagaaact tgaaatccat ttcgtcgaac aggcgctgac acgtcgaagc
     1441 gattttcgcc aaacgcgaag agatgtcttt cgcagcttcc gtcgcctggt ccgagctgga
     1501 agccaacgtc gcttgcggtg ccggcgccgg gtcgctttcc gaaactaata atcggaaatc
     1561 gcgcagccag ttaccggcct gcaacagcaa agcgccgctc caccaatgca gttcatcgat
     1621 ctcgccgctc gggtgcacgt gcgacaacgc tgcaactgtg tcgtcaatcg ttgccgcctg
     1681 ttcgttgaag cgctccagca aatcgcccca ctcggccaga ctctgcggct ctggcagggc
     1741 taacagttcc gcgcccgcgt ccagctcttg catcaactgc ttcatgctga tcgcgtcagt
     1801 gcgcttgcgg gcggttgtga gctgcgacat ctcctggcgc aagccggcca gcgtgtcgcc
     1861 taatccattc aaaacccgcg acccaaacaa ctggtcatcc ggaatttcca aacacgtctg
     1921 tttgagcgcg agcagacacg cagccaggtt tccgctgtca actgttgaca cgtagtgcgg
     1981 ccacatcgct tccaacgtcc tcgtgtcgta ccagttgagc aaatgaccac ggaacttttg
     2041 cagcctttgc tggctggcga acgttttctc caaacgctcg accagttcaa tcacgccgac
     2101 gtaaccaaag tcgtaagccg cgacggttga gagccataac agactgatgt tcgtcggtga
     2161 tgtgcgatgc gcaacgacgg gtctcggatc ttcctgaaaa ttgtccggcg gtaaccagtt
     2221 atcctcatcg ccgacgaacg tttcgaagaa acgccaggtg cggcgcgcga cgatgcggat
     2281 ggtgcgcagg tctttggcgt tcagcgagag cgccacttcg gcgcggcggc ggctaatgac
     2341 aaaagcaatg acgggcgacg ccgcccacgc caccaaaaag accgccgcgg ccggcaggga
     2401 tgcgacgttc gacagcacaa ttagtgcgat cgcgaccaat acgacaactt cagccggcca
     2461 catgaaacga atgaacgcgg gaagatcatg cttactcgac gcttcggaac tcgcggcggt
     2521 aacccattcg agcagatgac gctgcgaaac aaactttcgg tagatcgtcc gagcaatcgc
     2581 atccatcatc aaccacgcct ggtgcgcgag aaagacaatc tcaacggcga tctgtgcggt
     2641 gtttgtgcgc gcgtcacccc agacactcca gaagtgactt gtccagggca cgccgcgcgg
     2701 atgaatcagc aaaccacttg tgacgtgcgc gtaaactgga aacgcgagcg tcagcagcac
     2761 aaacaattcc caccaccacg cactgacggg aagcaccgtc cacccggcga tcaacaacaa
     2821 cacaatcgaa ggcgccaata gacttcggcg gaaattgtcg agaatctgcc agcgtgagat
     2881 cgccggaatg cggttgggtc gtttgtcgcc gtgtgcgtca cgcaccgtac cgaatagcca
     2941 gtccgcgatt tgccagtcac cacgcgtcca acgatgctgc cggcgcgcga atgagtcgta
     3001 gtaggccggg tagtcatcga gaaactcaat gtccgtaacc agcgcggtac gcgcaaaaat
     3061 cgattcgaac aggtcgtgac tcaacagcgt ctgctcgggc acacgttcat gcagcgcctg
     3121 ctcgaatgct ttgacgtcgt agaggccttt gccggtgtaa atgcccgcgc cgaagagatc
     3181 ctgataaacg tccgaagccg ccgtcgtgta gggatcgacg ccggtgttgc ctgagaagat
     3241 gcgcgcaaag gttgagcgcg acgcgctttc gagagaaata ctgacccgcg gttgaaagat
     3301 cgagtaaccc tctgtcacac gatcttccgc cgcgtcgaac ctgggcagat tgagtggatg
     3361 aatcgccgtg ccgataaggc ggtgcgcggt ctcgcgcggc agttgcgtgt ctgcgtcgag
     3421 ggtgatgacg tagcgaatct gtgacagcag ttcgtcgccg gcggtggtga tggtaaagct
     3481 ggtgtcagtg gcgccgagca gcagttggtt gaattcgcgc agcttgccgc gctttcgttc
     3541 ccacccaatc cacgagtttt cggtctcgca ccactggcgg cgacgatgaa aatagttgaa
     3601 gcgtccgggg tgcacgccgt tgtaacgctt gttgagggcc gcgatgcggt ccagagccgc
     3661 ggtgacgatt tccttgtcgc cgggcatcgt ttcgctggct gcatcggcga agtcaccaag
     3721 aatcgcgaag tgaatgtgct cgtcctggtt tccgaggtat gtaatctcca gcttctcggc
     3781 tatttcctcg accgtagcca catcggaaag gatcaccggc acgacaacga tcgtgcgcgc
     3841 ttcaggagga aggcctttgg acagatcgag tttcgggagc agacgcgggc ggtagctgtg
     3901 cgtaatgccc caattgagaa tgctgatcgc gaggtcgctg gccggcagca gtgccagaaa
     3961 aactgccagc actacaccca ctgggtgcgg ctgcgcgcga aacaccgcca cggcgattac
     4021 cgccaggatc agagccgtca gcaacgtcag cgagccgaga aaaaagaacg tcgcatgacg
     4081 tagcgtccaa cgctcgagcc tctcgccaac caacggacga tagctcgtct cggattcaag
     4141 ctgcccgagc ccgcggccaa tcaggaagta gccgatgtgc gcttgcgtgc tctcttgacc
     4201 atccgtgggc gccgcttccg ccaggcgtaa tgccgcacgc gcgacatcca gttccctgac
     4261 ctttgcccgt tttccgatcc gctcaacgac cttgcggtaa cgatcacgcg tcgcgaaatc
     4321 catgcgcgag tagatgccgg ccggatcttt cgccaattca cgatcgatca agctgacggt
     4381 ttcaaaaaaa tcgcgccagt ccagcgtcga gagcaggcgc atgctcgtga tgatgttgcc
     4441 cacggtgacc tgcgcgctgg cctgcctccg atgttcttcg tgaacaatgt cgtgaatcga
     4501 gaggttaagc ttgtgcagtt gcatctcgag ccactcaacc gcaggcagaa ctgccgggtc
     4561 ctgctcgcgg aggcgttgca tcaactgcac gacaaacgcg cggcccagtg tttttcgctt
     4621 acccagcctg cccgaaatca gcggcacaat ctcctgcgga ttgagctgcg cggtttcgag
     4681 aagtgtgtcg gccagcttgt cagcttcttc gcgctcagcg cgcgaggaaa cgatacgcgt
     4741 cgcaagcctg cgcagatttt ctacgagtgc gagacgaaga gtgatcggca ccgcccataa
     4801 ctcgccaatc gatagcggcg cgaccttttg gtaaccgttg atgaagcggc gcagcgtttc
     4861 ggaatcgaga taactatccg tatgcgcgac cagcgcaacc gacagcgcat agatgcgtgg
     4921 ataacctttg aacgcgcctt cggcaagctt gggaagttcg tcgtagtagc tcttcggcag
     4981 gtcctcgcga atttcgcgaa tttgctcttc aactatgtga aagttatcta ccagccattc
     5041 ggctgcgggc gagatgacgt gctcactgcg aatcgattcg gcgagcgcgt tgtaagtctc
     5101 gacgagcttg cgaccgtttt gttccagacg cggtaagagc aaactgcccc gctgaggcgt
     5161 gtcggcgatc gtgtgttggg cagctagttc tccggcgtat tgctcaagcc gctcgacgct
     5221 gaaaagctct tcacgaatcg gcggctcgcc gctgtcgttg gacctgcgac ggaaaatccg
     5281 gatcaatgct gagaatggcc acggcatcat cagggaaaac aggggaattc ttggggattt
     5341 tcgttaggat agcacgagtc agaaccgcca tgcggtagcg ggcggttgat cggtagtctt
     5401 gttttgagtt tttctcagtg tctctgtgcg tcctctgtgc ctctgtggta aaaataaaca
     5461 aaccccacca cagagacaca gaggattttc actgaggcac agagagactt cggatgaggt
     5521 actacagtcg ggcgtagcgc tactccagat cacccgctac cgcaggtggt tcagacttga
     5581 accgtcgttg cacgttcata ctcaactcaa tcaatcccgg caccacataa atcgccgcca
     5641 ccgcgccaaa caacgcgccc gtcgtcacgc gcgtaaagtg gttgttctcc caaatctcga
     5701 agtacgtcag cccgaaatcg atggcgagcg ggacgcctga caataaaagc cagatgacgt
     5761 gcggcgtgtc ggttcttttc aatgagcgcg ccagaggcca cgcgagtgtc gcgaaagcga
     5821 atccggcgta caaccccgtg cagcgagaac agacggcgaa tggatggccg gcaagatgaa
     5881 atgaacgctc gggaatttga tgacagaggt aactgaaggc tttgtagatc gcggcagcaa
     5941 acgccggata cccatttgcg tgcgccacag gcgcagcgac aatcgcggcg atgacgacaa
     6001 acgcaattat cgccgaaaca gaaaaaacag cgagcgtcag gatgagcaga tgcgacgagt
     6061 ttcgatcgaa tgccaatgta tgaatcttgg atcgcgcgag aatctactgt cccatcagaa
     6121 atacatccca ggcccaccgt ccgatttgtg ctccgtggat gtctttgact ttggctcgat
     6181 atctaaactc gttgccgtac gagtcaacgc gtttcgaaag tttgtaatcg agataaatcg
     6241 cgctcaatcc caggtcgggc agtgtatgca gttccgaact ctcggaaatg ccgttatggt
     6301 tcgtgtcctg ccaaaggcgg agcgaggaga aaacaaggtc ggcggtcgtt agtgttccat
     6361 cggcgttgcc gccgttttgt ggtttgtcat actcggcaag agccaggaat ccgttcttct
     6421 cctcacccgg cggaggcgcc gattggggtg aaaaacttcc aaagagctcg cttccgttat
     6481 cgataaaccc gttgccgttg cgatcaagga ccaaccacgc gtcgtcgctt tccgcggaga
     6541 tccaggagag ccgctcaagg atgccatcac cgttgatgtc gaaatcaacg ccattggcgg
     6601 cgtcagtcag attaaaccca ttcccattaa catcgatcaa aactggactg ggccgataac
     6661 actcgcacgc cgtcttcatc actcccggta ccggggggca gcccccataa ccattcgcgc
     6721 agtagtctac cggcccgaga caattcgagg gacatgtccc ccaatcgaaa tcaaggcatg
     6781 gacagctctc gggagttg
//
LOCUS       DATDBY010000169         4072 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2627806, whole genome shotgun sequence.
ACCESSION   DATDBY010000169 DATDBY010000000
VERSION     DATDBY010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4072
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2627806"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..497
                     /locus_tag="VIT19_03220"
     CDS             <1..497
                     /locus_tag="VIT19_03220"
                     /inference="COORDINATES: protein motif:HMM:NF024584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SPASM domain-containing protein"
                     /protein_id="HEY5838019.1"
                     /translation="ETLVGDKIKQVPPNVLPQMYAYISQLTKRYGDRMFADDGASRRF
                     VKNVAYVGTITTHYRTQHENFAKSTAWPFACTAGETIAVIDYNGDVRACELRQKFGSL
                     REHEYDFGALWASQERTAELKAIDGGKACWCTHVCFIHDSMRHSRRALLVEGPKNYLT
                     RATW"
     gene            512..1105
                     /locus_tag="VIT19_03225"
     CDS             512..1105
                     /locus_tag="VIT19_03225"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEY5838020.1"
                     /translation="MSQRLVTYVTPEEYLRRERLAESRSEYLNGEIFAMTGASRQHNR
                     ITINISSSLNLQLKGRPCETYAVDMRVKVRASGLYTYPDVAVVCGDPQFEDEYVDTLL
                     NPTLLVEVVSQSTERYDRIAKTSYYRTIDSLAEHLLVAQDEIRLEQYVKRPNGQWLLS
                     EYRELDEVVELTAIGCELRLSDVYDRITFEPKRRVSR"
     gene            1092..1310
                     /locus_tag="VIT19_03230"
     CDS             1092..1310
                     /locus_tag="VIT19_03230"
                     /inference="COORDINATES: protein motif:HMM:NF021073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEY5838021.1"
                     /translation="MSAGDDKEETNIKSGIAYGAAVSLFAAVVGGLIVGWLLDRWLGT
                     SPWLLVVGLILGAAAGFYEFIRATSRLN"
     gene            1689..3920
                     /locus_tag="VIT19_03235"
     CDS             1689..3920
                     /locus_tag="VIT19_03235"
                     /inference="COORDINATES: protein motif:HMM:NF020390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 family protein"
                     /protein_id="HEY5838022.1"
                     /translation="MRDHAYLLRGSFAAICASLLVFIAGPIQKASAAPQKSPVLYSAS
                     ASSTRAVALESVTLRAEPFQLTSDGYFGAGDTRTRIVLFGTDFEFLQGEGVNALSADA
                     QDAAGALYPLNVEYVGTVPNFDGVYMVIVRLNDSMGSNLGDVLLRLRLHGMASNRVRV
                     AIGQVGGGPPDDFPGVGTPAPASPPGAVSPLTLAQYQAQYDSPSFPDDADIIRFLEQS
                     SWGPRGDGSDFNQVRSMGINAYLNQQFNEPVANIPKGSNYPDLAFPSDDSSQGCPGGS
                     PATCGRDNYSLYPVHKTFFTNTLSRSDQLRQRVAFALHQITVSSGLSPLDRPSWETMY
                     LQVLDRGAFGNYRTLLQEITLNPEMGEYLDMRLSTRTNPNENFAREVLQLFSIGVNEL
                     NLDGTVKVDAQGVPIPAYTQAHVNEFTRLFTGWNLVGGGLPIPPGMTGAVTNWRDPMV
                     PRGGTNHDFDPKTLFNGVVTPDCANTSGAVNIACAQADLTIGLDNIYNHANVAPFISK
                     QLIQHLVTSNPSPAYVARVATVFNSNRANPTQMREVVKAILLDPEARGTVKTDPNYGK
                     LREPIQYLTNILRGFNATSDGVIANRSTSSGIGDMTVYLDQPLFQPPTVFSYYQAEYQ
                     VPGTGILGPAFGILSTSTTLRRANVANQLIYSGIPINATNAPLGTQLNLSSLEAQASN
                     PGAVADALNALLLHGTMSTQFRNSIITAMNAIPTSGSNFARRRAQVAVYLVTTSSQFD
                     VQR"
BASE COUNT          900 a         1132 c         1155 g          885 t
ORIGIN      
        1 gcgagacact cgtgggtgac aaaattaagc aggtcccgcc gaacgtgctg ccgcagatgt
       61 acgcgtacat ttcgcaattg acgaagcggt acggcgaccg aatgtttgcg gacgacggcg
      121 cgtcgcggcg cttcgtaaaa aacgtcgcct acgtcggcac catcacgacc cattaccgaa
      181 ctcagcatga gaacttcgcg aaatcaaccg cctggccatt cgcgtgcaca gcgggggaaa
      241 caattgccgt catcgactac aacggcgatg tgcgcgcgtg cgagttgcgt cagaagtttg
      301 gcagcctaag ggagcacgaa tacgacttcg gcgctctgtg ggcaagtcag gaaagaaccg
      361 cggaactaaa ggcaatagac ggcggcaagg cgtgttggtg cacgcacgtg tgcttcattc
      421 acgactcaat gcggcattcg cggcgggcct tgctcgtcga agggccgaag aattacctca
      481 ccagggcaac gtggtaaagt gccaatacgc gatgtctcag cgacttgtaa cctacgtaac
      541 tcctgaggaa tacctccggc gcgagcgcct ggctgagtcc aggagcgaat atcttaacgg
      601 cgagatattt gcgatgactg gagcgagccg gcagcacaat cgaattacga tcaatatcag
      661 cagttcgctg aatctccagt tgaaagggcg tccctgcgaa acttacgcgg tggacatgcg
      721 cgtgaaagtg cgagcttccg gtctttacac ttacccggat gttgcagttg tttgtggcga
      781 tccacaattc gaggatgagt acgttgatac gctgctcaat cccacgctgc tcgtcgaggt
      841 tgtatcacaa tcgactgagc gctatgatcg cattgccaag acttcgtatt accgcacaat
      901 cgactcgctt gctgagcatc tgttggtggc tcaggatgaa attagactgg agcaatacgt
      961 gaaacgcccc aacggacaat ggcttttgtc tgagtacaga gaactcgatg aagtcgtcga
     1021 gttgactgca atcggatgtg aactcaggct aagcgatgtt tacgaccgaa tcaccttcga
     1081 gccaaagcgc cgtgtcagca ggtgacgaca aagaggagac gaacattaag tcggggattg
     1141 cctacggcgc ggccgtgtct ctcttcgcgg ctgtggtcgg tgggctgatc gttggctggc
     1201 tgctcgatcg ctggctcggc accagcccgt ggttgctggt tgttggtcta atcctcggcg
     1261 cagccgccgg tttttacgag ttcattcgcg ctacttcccg gctcaactaa tcgtcggtgg
     1321 aagctccctc tcgctctggg aaagggccgg ggagagggtg cgcagcttag cgggtgatcg
     1381 ggttgacctg agttctcgca aggctgagcc tcgcgcgaag caagatagta aagttgaatg
     1441 ttcgcgctaa gaccctcacc ctaaccctct cccaaaggga gagggaattc tttcgttcaa
     1501 tttgaatggc ctcagaaata cctcaaccaa ctcgcacagg tcgtcgtcta aaagtattga
     1561 ccaggcgaag acccgctgtg tatagtcttt cgaaccaggg tgcatcgccc ggtggcccct
     1621 ccaccaagca aaagttgtcc tagcctctcg cgttcttgag cgacattgtg agtagagagc
     1681 ctacccctat gagagaccac gcctacttgt tgcgcggaag tttcgccgcc atttgtgcaa
     1741 gtcttctagt tttcatcgcc ggcccaattc aaaaagcttc ggcagcgcca caaaagagtc
     1801 cggtgctgta tagcgcctcg gcttcatcga cacgagcggt cgcgctcgag tcggtgacat
     1861 tgcgggctga gccgtttcag ttgacgtccg acggttactt tggcgcaggc gatacacgaa
     1921 cgcgcatcgt tctgttcggc actgacttcg agtttctaca aggtgaaggc gtgaacgcct
     1981 tgagcgcgga cgcgcaggat gcggccggag cactctatcc gttaaatgtt gagtacgtcg
     2041 gcaccgttcc gaatttcgac ggcgtttaca tggtgatagt gcggctgaac gattcgatgg
     2101 ggtcgaacct tggcgatgtg ttactgcgtc tgcggctgca tggaatggcg agcaatcgcg
     2161 tgcgcgtggc catcggacaa gttggcggcg gaccgccgga cgatttcccg ggcgtgggaa
     2221 cgcccgcgcc agcgtcgccg ccgggcgcag tgtcgccgct cacgcttgcg cagtatcagg
     2281 ctcaatacga cagtccgagt tttcctgacg acgcggacat cattaggttc ctcgaacaat
     2341 catcgtgggg tcccaggggt gacggatcgg attttaatca ggtccgctcg atgggaatca
     2401 atgcgtatct caaccaacaa ttcaacgaac cggtagctaa cattccgaag ggatccaact
     2461 atcccgattt ggcgtttccg tctgatgatt ccagtcaggg ctgtccaggc ggaagtccgg
     2521 ctacatgcgg gcgagataat tactcgctgt atcccgttca caagacgttc tttacaaata
     2581 ctctgtcaag atcggatcag ttgcgccagc gagttgcttt cgcgcttcac cagattaccg
     2641 tttcttccgg tctttcgccg ctcgatcgtc ccagttggga aacaatgtac ttgcaagtgc
     2701 ttgatcgagg agcatttggt aattaccgca cactccttca ggaaatcacc ctcaatcccg
     2761 agatgggtga atacctcgat atgcgtttga gcacgaggac gaatccgaat gagaactttg
     2821 cccgcgaggt ccttcagctc ttctcgatcg gcgtgaacga gttgaatctg gatggcacgg
     2881 tgaaggtaga tgcgcaaggg gttccgattc ctgcctacac gcaggcgcac gtaaacgaat
     2941 tcacgcgcct gtttactggt tggaacctgg ttgggggagg gttacctata ccgcccggaa
     3001 tgaccggcgc cgttaccaac tggcgcgatc cgatggtgcc gcgcggtgga acgaaccatg
     3061 atttcgatcc aaaaactcta ttcaatggcg tggtaacccc tgactgcgca aacaccagcg
     3121 gcgcggttaa catagcttgc gctcaggcgg atctgaccat cgggctggac aacatctaca
     3181 accacgcgaa tgttgcaccg ttcataagca agcaactcat ccagcatctg gtcacgagca
     3241 atcccagccc ggcatacgtc gcgcgggtgg cgactgtttt caacagtaac cgcgccaacc
     3301 cgacgcagat gcgggaagtt gttaaagcga tcctgctcga tcctgaagcg cgcggaaccg
     3361 ttaagaccga tccgaactat ggcaagttgc gcgagccaat ccagtacctc acgaacatcc
     3421 tgcgtggctt caatgcgacc agcgatggtg tgatcgcaaa tcgctcaaca tcgtccggga
     3481 taggcgatat gacagtttac ctggatcaac ccctgtttca gccaccaacg gtgttcagct
     3541 attaccaggc tgagtaccag gtgccgggaa cgggcatttt gggtccggcc ttcggcatac
     3601 tttcaacgtc cacgacactg cggcgcgcga acgtggcgaa tcagctgatc tattcgggga
     3661 ttccaataaa cgcgacgaac gcgccgcttg gaactcaact gaatctgtca tcactcgaag
     3721 ctcaggcgag caatcccggc gcggttgccg atgcgctaaa cgcgctgctg ttgcacggca
     3781 ccatgtcaac gcagttccgc aattcgatca tcaccgcgat gaacgcaatt ccgacttcgg
     3841 gcagcaactt cgcgcgcagg cgggcgcagg tcgcggtgta cctggtaaca acttcgtctc
     3901 agttcgacgt acagagataa ccatcatggc accatcacgc agagatttct tacggacggg
     3961 cgcgtgcgcg ctcggcggcg cggcgctggc ttccagcttc gacagctttg gccttgttca
     4021 tgccttaacg ccacaagccg cgaccgacta tcgcgcgctg gtctgcatct tt
//
LOCUS       DATDBY010000170         2282 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1712870, whole genome shotgun sequence.
ACCESSION   DATDBY010000170 DATDBY010000000
VERSION     DATDBY010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1712870"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VIT19_03240"
     CDS             <1..429
                     /locus_tag="VIT19_03240"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEY5838023.1"
                     /translation="NVGAEERGTAAIFNKPPQVAAALVFSLLLVMGLLFAINRGYQGL
                     QKRDAAKLEQAAETRQAQQQNLQAGATGVSQLSDDTGRVGTNLYTYAALPFEIASVLL
                     LVAIIGSVMLARTLKQEVAADDVDPEVLNKAKSSEPEATS"
     gene            433..837
                     /gene="nuoK"
                     /locus_tag="VIT19_03245"
     CDS             433..837
                     /gene="nuoK"
                     /locus_tag="VIT19_03245"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF004323.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEY5838024.1"
                     /translation="MFAFASILVLALQDASGSRMSAAMDSIKHPDLSKFLVIGAILFI
                     IGVAGVLVRRNIIVIFMSIELILNAANLNFIAFSRYLADTGGANPLSGQVFTVFVIVV
                     AAAEAAIGLGIVIALYRNRETIWVDEIDLMKW"
     gene            928..>2282
                     /locus_tag="VIT19_03250"
     CDS             928..>2282
                     /locus_tag="VIT19_03250"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEY5838025.1"
                     /translation="MYRYIWLVPLLPLIGAAINGIFGRWFRFPEKLIGGIAVGTIALS
                     FLITVAAVYSYGFSGNALWPNPYVTTQTSFTWINGGAVRQSLGQTQDQAQSAPGTEVH
                     GMTPRFAEESAGSLLNVRWSYQLDPLSAVFMLIVTGVGLCIFVFATGYMHGDPGFYRF
                     FAYMGLFMFSMLVLVMGSNFVMMFVGWEGVGLCSYLLIGYYFNREEAANASRKAFITN
                     RIGDFGFILAIFGIIATFGSAQYTDVIPGAAAYPVETLGHWGLMSWIALGLMIGACGK
                     SAQFPLHVWLPDAMAGPTPVSALIHAATMVTAGLYMLTRTNVIFQHSQTMMLVVAVIG
                     AFTAIFAATIGITQNDIKKVLAYSTVSQLGFMFLACGVGAFTIGIFHVMTHAFFKALM
                     FLGAGSVIHGMHHEQDMRRMGGLKKYMPYTYLTFLAGWLAICGIIPFSGFWSKDEILW
                     KT"
BASE COUNT          450 a          617 c          664 g          551 t
ORIGIN      
        1 aacgtaggcg cggaagagcg gggaacggcg gcgatcttta ataagccgcc gcaggtcgcc
       61 gcggcgctcg tcttctcgtt gctgctggtt atggggttgc tgttcgcaat taaccgcggc
      121 taccagggtt tgcagaaacg agacgcggca aaactggagc aagccgcgga gacccggcaa
      181 gcccagcagc aaaaccttca ggcgggagcg accggagtca gccaactgag tgatgacact
      241 ggacgcgtcg gcacaaactt gtacacctac gcagccttac cgtttgagat tgcgagcgtg
      301 ctgttgctcg tcgccatcat tggctcagtg atgctggcgc gtactttgaa acaggaagtt
      361 gccgctgatg acgtcgatcc tgaagtccta aacaaggcca aatcttcaga accggaggcg
      421 acgagttaac gcatgttcgc tttcgcttcg atactcgtgc tggctttgca ggatgcttcg
      481 ggcagtcgca tgtcggcagc aatggacagc atcaagcatc cggatctttc aaagtttctc
      541 gttattggcg ccatcctttt catcattggc gtggccggcg tgctcgtgcg gcgcaacatc
      601 atcgtgatct tcatgtcgat cgagctgatt ctgaacgccg cgaacctgaa tttcattgct
      661 ttctcgcgtt acctggcaga caccggcggg gcaaacccgc tttccggaca agtattcacg
      721 gttttcgtca tcgtggtggc cgccgccgaa gcggcgatcg gactcggcat cgtcatcgcg
      781 ctctatcgca atcgcgaaac gatctgggtt gatgaaattg atttgatgaa atggtgattg
      841 gtcccattgg tcgtattcgt cccatcggtc ccatgggacg taagcgacaa ataggacgaa
      901 tacgaccaat aagatagtta agcattcatg tatcgataca tctggctagt tccactgcta
      961 ccgcttatcg gcgccgccat caacggcatc ttcggccgtt ggtttcggtt tccggaaaag
     1021 ctgatcggcg gaattgcggt gggcacgatt gcgctttcat ttttgatcac tgtcgcggcg
     1081 gtgtactcgt acggcttcag cggcaatgcg ctttggccga atccttacgt caccacgcaa
     1141 acgagcttca catggattaa cggtggcgct gtccgccaga gtctcggaca gactcaagat
     1201 caggctcaat cggcaccggg caccgaagta cacggtatga ctccgcggtt tgccgaggaa
     1261 agcgccggtt cgttactgaa cgtccgatgg agctaccaac tcgatcctct gtcagcagtc
     1321 tttatgctga tcgtgacggg tgtgggctta tgcatcttcg ttttcgccac cggttacatg
     1381 cacggagacc cggggttcta ccggttcttc gcctacatgg ggctgttcat gttttcgatg
     1441 ctcgtgctgg tgatgggctc gaacttcgtg atgatgtttg tcggctggga gggtgtcggt
     1501 ctctgctcgt atctgctgat cggctattac ttcaatcgcg aggaagccgc gaacgcttcg
     1561 cgaaaagcat ttatcacgaa ccgcatcggt gactttggtt tcatcctcgc gattttcggc
     1621 atcatcgcca cgtttggcag tgcgcaatac accgatgtga tcccaggagc cgccgcgtat
     1681 ccggttgaga cgctaggaca ttgggggctg atgtcgtgga ttgcgctggg cctgatgatc
     1741 ggcgcatgcg gaaagtcagc acagtttcct ctgcacgttt ggctgcctga tgcgatggcg
     1801 ggtccgacac cggtttcggc cctgattcac gcggcgacaa tggtgacggc gggtttgtat
     1861 atgttgacgc ggacgaacgt catcttccag cattcgcaga cgatgatgct ggttgtggca
     1921 gtcatcggcg cattcaccgc aatcttcgcc gcgacaattg gcatcacgca aaacgatatc
     1981 aagaaggtcc tggcttactc gaccgtgtcg cagctcggct tcatgttcct ggcctgcggc
     2041 gtgggcgcgt ttacgatcgg aatcttccac gtgatgacgc atgcgttctt caaagccctg
     2101 atgttcctgg gcgcgggctc agtcattcac ggcatgcatc acgagcagga catgcgccgc
     2161 atgggcggcc tgaagaagta catgccgtac acgtacctca cgtttctcgc cggctggctg
     2221 gcgatctgcg gcatcattcc gttcagcggc ttctggtcga aagacgagat tctctggaag
     2281 ac
//
LOCUS       DATDBY010000171         2469 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1872438, whole genome shotgun sequence.
ACCESSION   DATDBY010000171 DATDBY010000000
VERSION     DATDBY010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2469
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1872438"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..435)
                     /locus_tag="VIT19_03255"
     CDS             complement(<1..435)
                     /locus_tag="VIT19_03255"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEY5838026.1"
                     /translation="MPKKSAGLLLYRQNAHSGTEVLLVHPGGPFWRNKDEGAWTIPKG
                     EFHDEDPLAAAKREFKEETGSAPPDGQYIPLTSIKQKNGKIVHAWAVEGDFDPASLNS
                     NEFETEWPPKSGRMQKFPEVDRAEWFAPDAAKQKMLSGQGELM"
     gene            complement(454..>2469)
                     /gene="ppsA"
                     /locus_tag="VIT19_03260"
     CDS             complement(454..>2469)
                     /gene="ppsA"
                     /locus_tag="VIT19_03260"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: protein motif:HMM:NF005057.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEY5838027.1"
                     /translation="CHRCFASLWTDRAISYRAARGFDDFEVALAIGVQPMVRSDLACS
                     GVMFTLDTESGFRDVIVINGAWGLGEAIVQGMATPDEWIVFKPTLANGARPIVSRQLG
                     TKEVQMIYGLDGKGTRVREVVEAQRLRFCLSDYEVLQLAKWGCEIEQHYSERAGRPSP
                     MDIEWAKDGLTGELFILQARPETVHAMNKQNYIESYRLTGEHGAPLCEGIAVGEKIST
                     GQVHVLDNPAQLSEFRAGSVLVTSHTDPAWEPIMKKASAIVTDRGGRTCHSAIVSREL
                     GLPCIVGTGNATRVLKSEVDVTVSCATGAKGIVVEGLIDFVVDKHVIDNRSRPVTKVM
                     MNVGDPEHAFALASMPNDGVGLARLEFIINNHIGIHPMALVHYPKLANEEVVREIAKR
                     IGEEDPREFFVRRLAEGIARIAAAFYPNPVIVRMSDFKSNEYAMLIGGQDYEPAEENP
                     MLGFRGASRYYDDRYREGFQLECLALRRVREDMGLTNVKAMIPFCRTVEEGKRVIELM
                     AENGLPQGENDLEIYAMCELPSNVVFADEFLRIFDGYSIGSNDLTQLTLGLDRDSEMV
                     AHLFDERDGAVEKMISMAIDAAHRAGKKIGICGQAPSDYPEFARFLVEKGITSMSLNP
                     DTVMQTTELILAAEAELASNAGKNISLDEAAEVLASELKPIYVDEVV"
BASE COUNT          506 a          772 c          636 g          555 t
ORIGIN      
        1 cattagctct ccctgcccac tcaacatttt ctgcttcgca gcatccggcg caaaccactc
       61 agctcgatcg acttcgggaa acttctgcat tcggcctgat ttcggtggcc attcagtttc
      121 gaactcattg ctgttcagag atgccggatc gaaatcgcct tccacggccc acgcgtgaac
      181 gatcttcccg ttcttctgtt tgatggacgt tagcggaatg tattgtccgt cgggcggtgc
      241 ggacccggtt tcttctttga attcacgctt ggccgctgcg agcgggtctt catcgtggaa
      301 ttcgcctttg ggaatagtcc aggcgccttc gtctttgttg cgccagaacg gaccgcccgg
      361 atgaactagt aagacctcag tgcctgagtg cgcattctgt cgataaagca aaagccctgc
      421 acttttcttt ggcatgaacg aagacaccga agttcataca acctcgtcaa cgtagattgg
      481 cttcagctca gaggcgagca cctcggccgc ctcgtccaac gagatgtttt tgccggcgtt
      541 gctcgctaac tctgcttcgg ccgccaggat cagctcggtc gtctgcatca ccgtgtccgg
      601 attcagcgac atagatgtaa ttcccttctc gacgagaaag cgcgcaaact ccgggtaatc
      661 ggagggtgcc tgaccgcaga tgccaatctt cttgcccgca cggtgcgcgg catcaatcgc
      721 cattgagatc atcttctcga cggcgccatc gcgttcgtca aacaagtgcg cgaccatctc
      781 agaatcgcga tcgaggccaa gcgtcaactg cgtcaggtcg tttgagccga tcgagtaccc
      841 gtcaaagatg cgcaagaact cgtcggcaaa caccacattc gatggcaact cgcacatcgc
      901 atagatttcc aggtcgttct cgccctgcgg caaaccgttt tccgccatca gttcgataac
      961 ccgtttgcct tcttcaaccg tccggcagaa cggaatcatc gccttcacat tcgtcaggcc
     1021 catgtcttcc cggactcgcc gcagcgccag acactcaagc tgaaaacctt cgcggtagcg
     1081 atcgtcgtaa taccgcgacg cgccacggaa accgagcatc ggattctctt cggccggctc
     1141 gtaatcctgc cccccgatca gcatcgcgta ttcattcgac ttgaaatccg acatgcgcac
     1201 gatgacggga ttcggataga aagcggccgc gatacgcgcg atgccttccg ccaaacgacg
     1261 cacgaaaaac tcgcgcgggt cctcttcacc gatgcgtttt gcgatctcgc gcacgacttc
     1321 ttcgtttgca agcttcggat aatgcaccag cgccatcggg tgaatcccga tgtggttgtt
     1381 gatgatgaac tcgagtcgcg ccagcccgac gccatcgttc ggcatcgacg cgagcgcgaa
     1441 agcatgctca gggtcgccaa cgttcatcat gaccttcgtc accggccgcg agcggttatc
     1501 gatgacgtgc ttatcaacga cgaaatcaat cagaccctcg accacgatcc ccttcgcgcc
     1561 ggtcgcgcag gacaccgtca catccacctc ggatttcaaa actctggttg cgttgccggt
     1621 gccgactatg cagggcaaac ccaactcacg gctgacgatt gcgctgtggc aagtgcggcc
     1681 tcctcgatcc gtgacaatcg ccgaagcctt tttcatgatc ggctcccagg cgggatcggt
     1741 atgcgaagtt acgagcaccg aaccggcgcg aaactccgac aattgagctg gattgtcgag
     1801 gacgtgtacc tggccggtac tgatcttttc tcccacggcg atgccttcgc acaaaggcgc
     1861 cccgtgttct cctgtgagtc tgtaactctc gatgtaattc tgcttgttca tcgcgtggac
     1921 cgtctcaggt cgggcttgaa ggatgaatag ctctcccgtc aatccgtcct tggcccattc
     1981 gatatccatc gggcttggcc ggccggcgcg ttcggagtag tgctgctcga tctcgcaccc
     2041 ccacttcgca agctgcagta cttcataatc gctcagacaa aagcgcagtc gctgcgcctc
     2101 gacgacttcc cgaactcgag ttcctttccc gtcgagcccg taaatcatct gcacttcttt
     2161 cgtgcccagt tggcggctga cgatcggtcg tgcaccgttc gcaagtgtgg gtttaaatac
     2221 gatccattcg tctggcgtgg ccattccctg cacgatcgct tcgcctaagc cccaagcgcc
     2281 gttgataacg atgacgtcgc gaaatcctga ttcagtgtcg agcgtgaaca tcacgcctga
     2341 gcaggcgaga tcggaccgca ccatcggctg tacgccgatc gcaagtgcta cttcgaaatc
     2401 atcgaaaccg cgcgcggcgc gataggaaat cgcccggtca gtccacagcg aggcaaagca
     2461 acgatgaca
//
LOCUS       DATDBY010000172         2020 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1805159, whole genome shotgun sequence.
ACCESSION   DATDBY010000172 DATDBY010000000
VERSION     DATDBY010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1805159"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            312..752
                     /locus_tag="VIT19_03265"
     CDS             312..752
                     /locus_tag="VIT19_03265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838028.1"
                     /translation="MKRTITLISCLTAWLVLTPSALTQKPKIVTAAQANGVYSSYDNE
                     IRILALGKNKLKVQFDGVYHTISKSVNTGNASGEATIEGTVAVLELPDFGPCKITIVF
                     LPRSRLKVTQDGDSPDCGFGNNVRADGTYRKIRGGKPKFEPPPE"
     gene            1022..>2020
                     /locus_tag="VIT19_03270"
     CDS             1022..>2020
                     /locus_tag="VIT19_03270"
                     /inference="COORDINATES: protein motif:HMM:NF012664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838029.1"
                     /translation="MLAALFFCFALLSFGQAPPGQQPAATPQAGASPPASPGGVGAGQ
                     QRGAPERPAPSPEEPPVITKHEIRVGGRTLRYTATTGMMPIKNRDGETEARLFFTAYT
                     LDDPANRARRPLTFSFNGGPGSSSVWLHLGTVGPKRVRMNSDGGMPAPPFELVDNEHT
                     WLTQSDLVFIDPVGTGYSRAARPDLAAKFLGLQGDIESVGEFIRIYMTRYERWASPLF
                     LVGESYGTTRASALSGYLIDRGIAFNGIMLVSAIMNFQTTAFAPGNDLPYALFLPAYA
                     ATAWYHKRLPSDLQSRPLTEVVAEVEDWSLNQYMVALARGDRMSPQQRQEIAARLSR"
BASE COUNT          428 a          584 c          560 g          448 t
ORIGIN      
        1 gccagacacg cgtctgggac gcgaccgaag acttgacgcg accccggttt acgtacatgt
       61 tttcatgcgg cgccgatgga cagacggatt gttaccggta accccggctc agctaattga
      121 tagaggagtt ggccgacaga aaagatcatt gtccatttgt catctttcat ttttcatttg
      181 tcattgaaat tcaagcgact agtatctgca gaagcgcgca cgaagtgagc gcggcgtctg
      241 atgatcgctg aagagcgcgc ttacttcgtg cgcgcttctg cattgcgcgc ctatttcgag
      301 aggacgaacc agtgaaacgt accatcacct tgatttcttg cctaactgcg tggctggtgc
      361 tgacgccgag cgctctcacg cagaagccaa agatagtcac agccgcccag gccaatgggg
      421 tgtattcctc gtacgacaac gaaattcgta ttctcgcgct cgggaaaaac aaactgaaag
      481 ttcagttcga tggcgtctat cacaccattt cgaagagcgt gaataccggc aatgcgagcg
      541 gtgaagcgac catcgaaggc accgtcgctg ttcttgagtt acccgacttt ggcccctgca
      601 aaatcacgat cgtcttcctc cctcgcagca gattaaaggt aacgcaggat ggtgactctc
      661 ccgactgcgg ttttggaaac aacgtgcgtg cggacgggac ctatcgaaag attcgcggcg
      721 ggaagccaaa gttcgagccg cccccggaat gagcagcgtc tcaatcacac cgcacttcag
      781 tgcggtgatt cggcaccata acctgcaatc aactgtttta acagtttcat tgataagccg
      841 ttgaaacggc tccgaaaact cattcactat ccgccatcac ctcgctaaag cgaggtgaga
      901 atgagaccag agcatcatca tccctgaatc gctgacaatt tacttgtcct ctcgcttagc
      961 tttcccttac tatgcacgcc tgctgttgcc ttcaaatcag tcttgtaggg gttaatcgcg
     1021 gatgcttgca gctctcttct tctgtttcgc gcttctctct ttcggacaag ctccgcccgg
     1081 ccaacaaccg gcagcaactc cgcaagccgg agcttcgccc ccagcttcgc ctggcggcgt
     1141 cggggctggc cagcagcgcg gcgcgccgga acggccggca ccttcacctg aagaaccgcc
     1201 ggtcataacg aagcacgaaa ttagggttgg cggcagaacg ctgcgctaca cggcgacgac
     1261 ggggatgatg ccgatcaaga accgtgacgg cgagaccgag gcgcgcttgt tcttcacggc
     1321 ttacacgctg gacgatccag ccaaccgcgc gcgccggccg ctgacattct ctttcaacgg
     1381 cgggcccggc tcttcatcgg tttggctgca tctcggcacg gttggtccga agcgcgtgcg
     1441 gatgaactca gacggcggaa tgcctgcgcc gccgtttgaa ttggtggaca acgaacatac
     1501 gtggctgacg cagagtgacc tggtcttcat cgacccggtg ggaactggtt acagtcgcgc
     1561 cgcgcgtccc gatctggcgg caaagtttct cggacttcag ggtgatatcg agtcagtcgg
     1621 cgagttcatt cggatctaca tgacgcgata cgagcgctgg gcgtcgcctc tgttcctggt
     1681 cggtgaaagt tacggaacga cgcgggcttc ggcactttcg ggttacctga ttgatcgcgg
     1741 cattgccttt aacggcatca tgctggtttc agcgatcatg aatttccaga cgaccgcgtt
     1801 cgcgccggga aacgatctgc cttacgcgct gtttctaccg gcctacgccg cgaccgcctg
     1861 gtatcacaag cgcctaccgt ctgatcttca gtcaagaccg ttgacggaag ttgtcgcgga
     1921 agttgaagac tggtccttaa atcaatacat ggtggctttg gcgcgtggcg atcgcatgtc
     1981 gccgcaacaa cggcaggaga tcgccgcgcg tctgtctcgc
//
LOCUS       DATDBY010000173         2153 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2389194, whole genome shotgun sequence.
ACCESSION   DATDBY010000173 DATDBY010000000
VERSION     DATDBY010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2389194"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..942
                     /locus_tag="VIT19_03275"
     CDS             <1..942
                     /locus_tag="VIT19_03275"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HEY5838030.1"
                     /translation="DYAILNNVQKVMPELGIPREKVVFVSGIGCSSRFPYYMNTYGFH
                     SIHGRAPAIATGIKAANPELSVWVITGDGDALSIGGNHFMHVLRRNLDINYILFNNRI
                     YGLTKGQYSPTSVFGQRTKSTPMGVIDYPVNPLSLAIASEATFVARSIDIDVKHLGSV
                     VDAAAKHKGVSFIEVYQNCNIFNDHAFDYFAERSVRQDRVLYLEHGKPMIFGKDRNQG
                     IRMSGAHPEVVTIGENGITEADLLVHDISLEDPSVAFMLARMEQPDFPQPVGIFRAVT
                     RPSYDQMMTEQIDSAIAKSGPGTLDKLIYSGDMWTVE"
     gene            1034..1540
                     /locus_tag="VIT19_03280"
     CDS             1034..1540
                     /locus_tag="VIT19_03280"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY5838031.1"
                     /translation="MLCPSCGYDNIEGADRCEECVTSLFNLDASQGGRRSLARSVMED
                     DLNQIEQDFVGVTSETPALAAIDKMRAAHVGCALVIDDGKLLGIFTERDVLNKLTGKQ
                     ALASTTAVKELMSADPETLRETDSVATALSKMSLGRYRHIPVRKTDGTYSVTSIKHVL
                     KYIAKEDW"
     gene            1632..>2153
                     /locus_tag="VIT19_03285"
     CDS             1632..>2153
                     /locus_tag="VIT19_03285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838032.1"
                     /translation="MKLSKLSKSLFVLLVLIVGLSPLAAAQEAKKPKTKKPLPTGTPI
                     LWRDPGDISGRDMRWGPGAADLAPVAPFTFVEEDPTGASPKFSVKDARGVNWNVKFGV
                     EAQSETVATRLVWAMGYFAEEAYYLERAEIQNLPRLSRGDEFINGIVVRGARFEPRRK
                     GVRRGAIWDWLKNP"
BASE COUNT          489 a          610 c          598 g          456 t
ORIGIN      
        1 gactacgcca tcctcaacaa cgtgcaaaaa gtgatgcctg aactcggcat tccgcgcgag
       61 aaggtggttt ttgtttcggg catcggctgt tcgtcgcgct ttccttacta catgaatacg
      121 tacggatttc acagcatcca cggacgcgcg cccgcgattg ccaccggcat caaagccgcg
      181 aatcccgaac tcagtgtttg ggtcatcacg ggtgacggcg acgcgctttc gattggcggc
      241 aatcatttca tgcacgtgct gcggcgcaac ctggacatca attacattct cttcaacaat
      301 cggatttacg gcctcacaaa gggccaatac agtccgactt ccgtctttgg ccagcgcaca
      361 aaatcgacac cgatgggcgt aattgattat ccggtgaatc ccctttcgct ggcgattgcc
      421 agcgaggcca ccttcgtcgc gcgctcgatc gatatcgacg tgaagcacct gggctctgtg
      481 gttgacgcgg ccgccaagca caaaggcgtc tctttcattg aggtctatca gaactgcaac
      541 atctttaacg accatgcgtt cgattacttt gccgaacgca gcgtgcgaca ggacagggtg
      601 ctctatctcg agcacggcaa gccgatgatc ttcggcaagg accgcaatca gggtattcgg
      661 atgagtggcg cgcatcccga agtagtcacg atcggcgaga acggaatcac cgaagccgac
      721 ctcctggtgc acgacatcag ccttgaggat ccgtccgtcg cctttatgct cgcgcgtatg
      781 gagcagcccg attttccaca gccggtcggc atcttccgtg cggtcacacg acccagttac
      841 gatcagatga tgacagagca aattgactct gcaatcgcaa agtcaggccc aggcacgctc
      901 gacaaactga tctatagcgg cgacatgtgg acggtcgaat aagtttcaag ttcaaagttt
      961 aaggtttcaa gttctatgcg cgaacttgaa acttggaacc tgaaacttga aaccctgagg
     1021 agcgtagcga cgcatgcttt gtccatcttg cggttacgac aatatcgaag gcgctgatcg
     1081 ttgcgaagag tgcgtgacgt cgctcttcaa cctcgacgca tcgcaaggcg gccgccgtag
     1141 tctcgcccgt tcggtgatgg aggacgatct caaccagatc gaacaggact tcgtcggcgt
     1201 aacctccgag acgcccgcac tcgcagcgat cgacaagatg agagccgcgc acgtcggctg
     1261 cgcgctggtg attgatgacg gaaagctgct gggaatcttc actgagcgcg acgtccttaa
     1321 caaactaacg ggtaagcaag cacttgcatc gacgaccgcc gtcaaagaat tgatgagtgc
     1381 agatccggag acgctgcgcg agacagattc agtcgcgacc gcgctcagca aaatgtcgct
     1441 cggccgctat cgccatattc ccgtgcgaaa gacagacggc acgtactccg taacttccat
     1501 caagcacgtc ctgaagtaca tcgccaaaga agattggtaa gctcaaccac cgtccttcgg
     1561 tgttttctgc gctcatcggt tgcgctataa tgcgcgccgc cgaaagctaa ccaatagtca
     1621 ggtaatctct catgaaactt tcaaaattat ccaaatcact tttcgttttg ctggtcttga
     1681 ttgtcggtct ttccccgctc gcggctgcgc aagaagctaa aaagcccaag acaaagaagc
     1741 cgctgccgac gggcactccg atcttgtggc gcgatccggg ggacatctcc gggcgcgaca
     1801 tgcgatgggg tcccggcgcc gccgaccttg cgccggtcgc gccgttcact ttcgtcgaag
     1861 aagacccgac cggagcatcg ccgaagttta gcgtcaagga tgcgcgcggc gtgaattgga
     1921 acgtgaagtt cggtgttgag gcacagtctg agaccgtcgc gacgcgtttg gtttgggcga
     1981 tgggctactt cgcggaagag gcttactacc ttgagcgcgc cgagatacag aacttgccgc
     2041 gactatcgcg tggcgatgaa ttcatcaacg gcatcgtcgt ccggggcgcg cgcttcgaac
     2101 cgcgacgtaa gggtgtaagg cgcggcgcga tttgggattg gttgaagaac cca
//
LOCUS       DATDBY010000174         3415 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2692222, whole genome shotgun sequence.
ACCESSION   DATDBY010000174 DATDBY010000000
VERSION     DATDBY010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3415
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2692222"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..2754)
                     /gene="clpB"
                     /locus_tag="VIT19_03290"
     CDS             complement(160..2754)
                     /gene="clpB"
                     /locus_tag="VIT19_03290"
                     /inference="COORDINATES: protein motif:HMM:TIGR03346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEY5838033.1"
                     /translation="MRLDKFTLRGQEAIQSAIELAERSQNQQVEPEHILCAMLDQPEG
                     IVRPLLGKIGANIQVIKNDCEAAVARFPRVQGGQQYFSSRLSQVFTAAQKQADEMKDE
                     YVSTEHLLLAIADEKTGDAGKILRQHGVNRDDLLKVMEQTRGGTRITDQNAEANYQAL
                     AKYARDLTDLARKGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGL
                     AQRIVSGDVPETLRNKRLVGLDLGSMLAGAKYRGEFEDRLKAVLKEIESAQGQIILFI
                     DELHTLVGAGAAEGAIDASNMLKPSLARGELRCVGATTLNEYKKYIEKDAALERRFQQ
                     IYVGEPTVEDTIAILRGLKERYEVHHGVRIKDSAIVAAATLSNRYITDRFLPDKAIDL
                     IDEAASRLRIEIDSLPQEIDQLEREIMQLEIERQALQREEDDRSKARLREIEQRIADL
                     KEKSSGMKAKWQSEKAIIEHIREAKAELEQLKLQLDQARNGGDLGRASEIQYGQIPEL
                     QQKLEAEQAKLGTLQLDGVTLKEEVDEEDVAEVVAKWTGVPVTKMLEGEMHKLLGMEE
                     RLRQRVIGQDEALQAVANAVRRARAGLQDPNRPVGSFIFLGPTGVGKTETARALAEFL
                     FDDERSMVRLDMSEYMEKHAVARMIGAPPGYIGYEEGGQLTEAVRRRPYAVILFDEIE
                     KAHADVFNVLLQILDDGRLTDSKGRTVDFKNTVLIMTSNLGSREIQEVSEDEKQVRDA
                     VTQVLQDHFKPEFLNRIDDIVIFHRLSRDQISQIVDVQLERLRQMLHERTISIVLEDS
                     AKELLAREGYDPNYGARPLKRAIQTLIQNPLAMKLLQGDIQPGQTVTVSAQDGELVFH
                     TNKAAAAA"
     gene            complement(2858..>3415)
                     /locus_tag="VIT19_03295"
     CDS             complement(2858..>3415)
                     /locus_tag="VIT19_03295"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEY5838034.1"
                     /translation="LRHLKAWRFTVFAGGLLPVMTINRYDPFRDLRNLQEEVNRLFTG
                     NAGRTFDDEGIARGSWSPSVDIYENKEQIVLEAELPGMNREDFDLTVENNVITLRGER
                     RFEKKEDTDNYHRVERAYGSFTRSFTLPNSVSGEGASADYRNGVLRVTLPKREETKAR
                     RIEVKGEGGARTIEAKTDKASAAQA"
BASE COUNT          675 a         1046 c          859 g          835 t
ORIGIN      
        1 cccgcatgct tcaatcgcgc cccgcaatca aagcattgtt tcgatgctga gagaatattc
       61 gccgttgcgt ttcagtgcaa caggaatatt cccgccagta gagcaagcaa ttcgcctgcc
      121 accatcagtt tctcacaaag ccgtcgtcgc gggtcgctct tatgccgcgg cggcagcctt
      181 gttcgtgtga aagaccagct ccccatcctg tgccgaaact gtcaccgttt ggcccggctg
      241 gatgtctccc tgcaagagtt tcatcgccag cggattctgg atcagcgtct gaatcgcgcg
      301 tttcagcggc cgcgcgccgt aattcggatc gtatccttcg cgcgccagca gttccttcgc
      361 cgagtcctca agcacgatcg aaatggtacg ttcgtgcaac atctgtcgca gtcgttcaag
      421 ttgaacgtcc acaatttgac tgatctgatc gcgcgacaac cggtgaaaga tcactatgtc
      481 gtcaattcga ttcaaaaatt caggtttgaa gtgatcttgt aaaacctgcg tcacagcgtc
      541 acgcacctgc ttctcgtcct cgcttacctc ttgaatctcg cgcgagccga gattcgaagt
      601 catgatcagg accgtgttct tgaaatcaac cgtgcggcct ttcgagtccg tcaatcggcc
      661 atcatccaga atctgaagca acacattgaa tacgtccgca tgcgcctttt cgatctcgtc
      721 aaagagaatc acggcgtagg gccggcgccg aacggcttcc gttagttgac cgccctcctc
      781 gtacccgata taccccggcg gcgcgccgat cattctcgcg accgcgtgct tttccatgta
      841 ctcagacatg tcgaggcgca ccatcgagcg ctcatcgtca aaaagaaact ctgcaagcgc
      901 acgcgccgtt tccgttttgc cgacgccggt cggtccaaga aaaatgaacg agccaaccgg
      961 ccgattcgga tcctgtaagc ccgcgcgggc gcggcgcaca gcattagcaa ccgcttgcag
     1021 cgcttcgtcc tggccaatca cgcgctgccg cagccgttcc tccatgccca ggagtttatg
     1081 catctcgcct tcgagcattt ttgtgaccgg cacgccggtc catttcgcga cgacttcggc
     1141 cacgtcttct tcgtcaactt cttctttaag agtgacaccg tccaactgga gtgtcccgag
     1201 tttggcttgc tcggcttcaa gtttctgctg cagttcaggg atttggccgt attgaatctc
     1261 ggaagcacgc cccaggtcgc cgccgttccg cgcctgatcc aactgcaact ttagttgttc
     1321 gagttcagcc ttggcctcgc ggatgtgctc gataatcgct ttctccgact gccatttagc
     1381 tttcatgccc gaggattttt ccttcaggtc ggcgatgcgt tgttcaatct cgcgcaggcg
     1441 cgcttttgaa cggtcgtctt cttcgcgctg tagcgcctgc cgctcgattt caagctgcat
     1501 gatttcgcgt tcaagctgat cgatctcctg cggcaacgaa tcgatctcaa tgcgcagtcg
     1561 cgaagctgct tcgtcaatca agtcaatcgc tttgtcgggc agaaaacgat cggtgatgta
     1621 gcggttcgaa agcgtcgccg cagcgacaat ggccgaatcc ttgatgcgga cgccgtgatg
     1681 aacttcgtag cgttctttca agccccgcag gatcgcgatc gtgtcttcga ctgtcggctc
     1741 cccgacatag atttgctgga agcggcgctc gagcgcggcg tccttttcaa tgtacttctt
     1801 gtattcgttc agcgttgtcg cgcccacaca gcgcaactct ccacgcgcca aagacggctt
     1861 caacatgttc gaagcgtcga ttgcgccttc ggcagcaccg gcgccgacca gcgtgtgcag
     1921 ctcatcaata aacagaatga tctgaccttg cgcactctcg atctccttta agaccgcctt
     1981 caatcgatct tcaaactcac cgcggtactt cgcgccggca agcatcgatc cgagatccaa
     2041 cccgaccagc cgcttgttgc ggagcgtttc cggcacgtcg cctgaaacta ttcgctgcgc
     2101 cagaccttct acgatcgcag tcttaccaac gccgggttca ccgattagca cggggttgtt
     2161 ctttgtccgg cgcgaaagca cctggatcgt gcgtcggatt tcatcgtcac gtccgatgac
     2221 cggatcaagc tttcctttcc gcgccaaatc agtcaggtcg cgtgcgtatt tcgccaaggc
     2281 ctggtagttc gcttccgcat tttgatcggt gatgcgcgtg cccccgcgcg tttgctccat
     2341 caccttgagc aagtcatcgc gattaacacc gtgctggcgg agaatcttgc cggcgtcgcc
     2401 tgtcttctca tccgcaatcg ccaacagcag atgttcggtc gagacgtact cgtccttcat
     2461 ctcatcggct tgcttttgcg cggccgtgaa gacctggctt aaacgggaag agaagtattg
     2521 ctgtccgcct tgaacccgag ggaagcgcgc caccgccgct tcgcaatcat tcttaataac
     2581 ctggatgttc gcgccgattt tgccgagcag cggacgcacg atgccctcgg gctgatcgag
     2641 catcgcacaa agtatatgct caggttcaac ctgctggttc tgacttcgtt cagccagttc
     2701 aatggccgat tgaatcgctt cctgtccgcg aagtgtgaat ttgtctaagc gcatagcgaa
     2761 actctgacga ctaattctat caattctgac gattccgaaa gcaaacgggg caactgacga
     2821 aaccgccagc gccccgtcca cactaatcta agcgaactta cgcctgggca gccgaagcct
     2881 tgtcagtctt agcttcgatt gtcctggctc cgccttcgcc cttcacctca atccggcgcg
     2941 ccttagtttc ttcgcgcttc ggcaaagtca cgcggagcac gccatttcga taatcagcag
     3001 atgcgccctc tccggaaaca ctgttcggta acgtgaacga gcgcgtgaag cttccgtagg
     3061 cgcgctcaac gcggtgataa ttgtcggtgt cttccttctt ctcgaagcgt cgctcaccgc
     3121 gaagcgtgat cacgttattt tcgacggtca ggtcgaaatc ctcacggttc atgccgggca
     3181 actcagcctc gagcacgatt tgctctttgt tctcgtagat atcaacgctc gggctccatg
     3241 agccgcgcgc gatgccttcg tcgtcgaacg tgcggcccgc attgcccgtg aagagccggt
     3301 taacttcctc ctgaagattt cgtaagtctc gaaatggatc gtagcgattg atggtcatga
     3361 ctggtaacaa acctcctgca aaaactgtga atctccatgc tttcaggtgc cttaa
//
LOCUS       DATDBY010000175         4470 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2078263, whole genome shotgun sequence.
ACCESSION   DATDBY010000175 DATDBY010000000
VERSION     DATDBY010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4470
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2078263"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(375..1112)
                     /locus_tag="VIT19_03300"
     CDS             complement(375..1112)
                     /locus_tag="VIT19_03300"
                     /inference="COORDINATES: protein motif:HMM:TIGR00478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HEY5838035.1"
                     /translation="MPRERIDKLLVDRDLADSRTKAQALVMAGAVLVDEQLVRKPSEL
                     FDHDAKIRIKDDATSRYVGRGGIKLEAALREFKLDVNGLLCIDVGASTGGFTDCLLQN
                     GARRVVAIDVGHNQLDWKIRNDPRVEVREGVNARYLKPSDLDDQFDLATIDVSFISLT
                     KILPAIRPLLTDAGRIVALIKPQFEVGKGEIGKGGIVKDPAQHQRVVQEINAAAESLG
                     LSTAGVIESPIKGADGNVEFLALYVSA"
     gene            complement(1209..1466)
                     /locus_tag="VIT19_03305"
     CDS             complement(1209..1466)
                     /locus_tag="VIT19_03305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838036.1"
                     /translation="MKRQFFYERECCHRDKTTDGDTYNGIFFIQALQRLQSDDAVKMA
                     AKVSPFFWVDAPRVLVWLCKPCAAELSLIDSPRAVIQGARR"
     gene            complement(1691..2290)
                     /locus_tag="VIT19_03310"
     CDS             complement(1691..2290)
                     /locus_tag="VIT19_03310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838037.1"
                     /translation="MSTSRIEIPLTLQPPHFDDDATIATARQVVPIKGGRKIEGRRKV
                     LVLLPLLLASTLCGALGAVAVNYFERRRDAPTSVTQQAPLPNVSTQAKKEPSPVAIAP
                     ELNAKTTEIQAPVQPEDSSVTPADEPAQKSAAPKIAKREDADRKSAPNATMKREADQD
                     AAKLVRKRRVQPANSEIPLRRNRRTDAGRIEDLFTGPNP"
     gene            complement(2472..4391)
                     /gene="dxs"
                     /locus_tag="VIT19_03315"
     CDS             complement(2472..4391)
                     /gene="dxs"
                     /locus_tag="VIT19_03315"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF003933.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEY5838038.1"
                     /translation="MKLLQNINSPADLRRLKIDQLQEVAEEIRQHILETMARVGGHTG
                     ASLGAIELAVAMHYAFDTPQDRLVWDVGHQAYAHKILTGRRDLLPTVKQYGGISGFLR
                     RDESEYDTFGAGHASTSLSAALGMAIARDHKGEDHHVVALIGDASLAGGMAMEAVNQA
                     GHLKTRLIVVLNDNEMSIAPAVGALTGYLNRIREAHGYHRFKDEVEETLLSIPALGGA
                     LHHAAKTVKDAIASAVLPGALVNELGFKYIGYVDGHNVKSLVKALNEAKQIKDGPVIV
                     HALTTKGKGHPAAESDYYKWHATGPFDLKTGKPVKSAAKAPTYTKVFGETLCELMAKD
                     EKVVALTAAMPDGTGVCEALERFPERSFDVGIAEQHCVTFAAGLSVEGLKPVCAIYST
                     FLQRAFDQLVHDVCLQDLNVKFCLDRGGIAGGDGPTHHGLLDIAYLRGVPNMVVMAPK
                     DEGEMRDMMFTMIEHVGPAAMRYPRGNGMGVPIDQPPQLLEIGKAELLRDGGEVAIVA
                     YGSMVHPSLEAAANLAKDGIEATVINARFVKPLDSALLLALARTKRLIVTVEEAYLAG
                     GFGSAILELLEENGLQDKVSLVRMGIPDRIVTHGDAQLLLAKYGLDSDGIYTRVKEAV
                     DVLDDRRAQHHKVVA"
BASE COUNT          914 a         1270 c         1274 g         1012 t
ORIGIN      
        1 cgtgctcaat gcgctcgtga tcgagatcgg gcgttccgac gaggctgacg tttaattgat
       61 tgagccactc agtgaggcga caaagcgtgg caagcgcatc cggctgatgc ggtttaacga
      121 caacgccgat gcgtttgatg gacgccattc tctcgagtga ttgcgggacg cgcggatgat
      181 agccgtcggt tgatcggagt gtcaacgaaa cgaaagtcac cgttacatgg gtttgcggct
      241 ttgccgcagc accgtgcggt caggctcggc ctgaccggcg accgtctggt caagcgttgc
      301 ggcgaggctg agcctccgac ggtaaggcaa agccttaccg cagtgcgcgg tggcgaagcc
      361 acaggaacga tcactcacgc cgacacatac agcgcgagga attcaacatt gccatctgcg
      421 cctttgattg gtgattcgat tacacccgcg gttgacaggc ccagtgattc ggcggcggcg
      481 ttgatttcct ggacgacgcg ctgatgttgc gccggatctt tcacgatgcc gcctttgccg
      541 atttcgcctt tccctacttc aaactgcggc ttgatcagcg caacgatgcg acccgcatcc
      601 gtcagcagcg gcctaatcgc aggtaagatt ttcgtcagcg atatgaagga aacgtcgatg
      661 gtcgcgagat cgaactggtc atccaagtcg gacggtttga ggtaacgcgc gttgacgcct
      721 tcacgcacct ctacgcgcgg atcgttgcgt attttccagt cgagctgatt gtgaccaaca
      781 tcaatcgcga caacccgtcg cgcaccgttt tgcaaaaggc aatcagtgaa tccgcccgtt
      841 gacgcgccaa cgtcgatgca gagcagtcca ttgacgtcga gcttgaattc gcgcagtgcg
      901 gcttccagct ttattccgcc gcggccaaca taacgcgacg tcgcatcatc cttgattctg
      961 atttttgcgt cgtgatcgaa aagttctgag ggcttccgga caagctgctc atcgaccagc
     1021 accgcgccgg ccattaccag cgcctgtgcc ttcgtgcgtg aatcggctag atcacgatcg
     1081 acgaggagtt tatcaatccg ctcgcgcggc atgcggccat cgtatcagaa gcctgaattc
     1141 agtggcacag actttagtct gtggctcagt ggaaaaacac agactaaagt ctgtgccact
     1201 tctgatactc aacgccgcgc gccctgaatg accgcccgcg gcgagtcgat cagcgacaat
     1261 tctgccgcgc acggtttgca aagccaaacc aggactcttg gggcatcaac ccaaaagaac
     1321 ggagatactt tggcggccat cttcacggcg tcgtcacttt ggagtcgctg aagtgcctgg
     1381 ataaagaata ttccgttgta ggtgtcgcca tctgttgtct tgtcacgatg gcagcattcg
     1441 cgctcgtaaa aaaattgccg cttcataggg gtgccttcct ctcgcgccgc accgcgcgag
     1501 cacacgaatt tccgatcaat cgggctgctt attattaaat tgaggaaggg ccgggcgaac
     1561 caggaacggg caaatctgcg gtacgcctta ggcgcataat gccacgctca ttcaaggcgg
     1621 tcaatactca aatttatttt gtcgatgaaa tgccggcgat atgaccgaga aagtacaggg
     1681 agtctgccac tcaaggattt ggaccggtga agaggtcctc aatgcggccg gcgtccgttc
     1741 tccgatttcg tcgcaaagga atttctgagt ttgccggttg cactcttcgc ttgcgaacca
     1801 atttggcggc gtcctgatca gcttcgcgtt tcattgtggc gttcggtgct gacttccgat
     1861 cggcatcttc tcgttttgcg atttttggcg ccgcgctttt ttgagccggc tcgtcagcgg
     1921 gcgtgaccga cgagtcttcc ggctgaaccg gagcctgaat ctctgtggtc tttgcgttca
     1981 attccggcgc gatggcaacc ggcgacggtt ctttcttcgc ttgtgtcgaa acatttggca
     2041 gcggtgcctg ctgcgtgacg gacgtaggcg cgtctcgtcg tcgctcaaaa taattaaccg
     2101 cgacggcgcc cagggcgcca cacaaagttg atgcaagcag aagcggcaag aggacgagga
     2161 ccttccgtcg cccctcgatt ttccgaccgc ctttgatcgg cacaacctga cgcgcggtgg
     2221 cgatcgtcgc atcatcatcg aaatgcggcg gctggagtgt cagcggaatt tctattcttg
     2281 aggtgctcat tctagtacgg acaattgtcc gacgagctta gatgcaactc taaggcctca
     2341 ggtttctagg tggtaagcgg agtactgcgg tttgcctcgt gaggattctc acagcgattg
     2401 gagcggtcta gtgcgagatt gtgggcccgc ccgctaccgc aggcggttct gacttgatgc
     2461 cggatatggt gtcaggcgac gaccttatgg tgctgcgcgc ggcgatcgtc gaggacgtcg
     2521 acggcttctt tgacgcgcgt gtaaatccca tccgaatcaa ggccgtactt ggcgagcagc
     2581 agttgcgcgt cgccatgcgt cacgatgcgg tcgggaatgc ccatgcgaac caggctgacc
     2641 ttgtcctgaa gtccgttttc ttccagcaac tcgaggatgg cggaaccgaa gccaccggca
     2701 aggtaagctt cttccacggt gacaatcagg cgcttggttc gcgccagtgc cagcagtaaa
     2761 gcactgtcga gcggcttcac gaatcgcgcg ttgatgacgg ttgcctcaat gccgtctttc
     2821 gccagattcg cagcggcttc aagcgacgga tgcaccattg aaccataggc gacgattgct
     2881 acttcgccgc cgtcccgcag cagttcggct ttgccgattt ccagcaactg cggcggctga
     2941 tcgatgggca cgcccatgcc gttaccgcgc gggtaacgca tcgccgcagg gccgacgtgc
     3001 tcgatcattg tgaacatcat gtcgcgcatt tcgccttcgt cttttggcgc catcaccacc
     3061 atgttcggaa cgccgcgcag atacgcgata tccaaaaggc cgtgatgcgt cgggccatcg
     3121 ccgcccgcga tgccgccgcg atccaaacag aatttgacgt tcaggtcctg aaggcagacg
     3181 tcgtgaacca gttgatcgaa cgcgcgttgc aggaaagtcg agtaaatcgc gcacaccggc
     3241 ttcagtcctt cgacggacaa tccggcggca aacgttacac agtgctgctc ggcgattccg
     3301 acgtcaaacg atcgttcggg gaacctttcc aacgcttcgc aaacaccggt tccgtcgggc
     3361 atggcggcgg tgagcgcgac gaccttttcg tctttggcca tcaactcaca caacgtttca
     3421 ccgaaaactt tggtgtaggt tggcgccttt gccgctgact taaccggctt gccggttttc
     3481 agatcgaaag gcccagtcgc atgccacttg tagtaatcgc tttccgctgc cgggtggcct
     3541 ttgcctttgg tggtcagcgc gtgaacgatg acggggccgt ctttgatttg cttggcttcg
     3601 ttgagtgctt taaccaacga tttgacgtta tgtccgtcaa cgtagccgat gtatttaaaa
     3661 ccgagttcat ttacgagcgc acccggcaac accgctgagg caatcgcatc cttcaccgtt
     3721 ttcgcagcgt gatgcagcgc tccgccgagg gcgggaatcg agagcaacgt ctcttccact
     3781 tcatctttga aacggtgata accatgggct tcgcgaatac gattgagata accggtcaaa
     3841 gcgccaaccg caggcgcgat cgacatctcg ttgtcattca gcacgacgat caggcgcgtt
     3901 ttcaaatgac ccgcttgatt gacggcctcc atcgccatcc ctcccgcgag cgatgcgtcg
     3961 ccgatcaatg cgacgacgtg atgatcttca cctttgtgat cgcgcgcgat tgccattccg
     4021 agcgcagccg aaagggaagt cgaagcatgg ccggcgccga atgtgtcgta ctcagattcg
     4081 tcacgacgca ggaaaccgct gatgccgccg tattgcttga cggtgggcaa aaggtcgcgt
     4141 cgcccggtca aaattttgtg cgcgtacgcc tgatggccga cgtcccaaac cagccgatct
     4201 tgcggcgtgt cgaaggcgta gtgcatcgct acggctaatt cgatcgcgcc aagcgaggcg
     4261 ccggtgtggc cgccgacacg cgccatcgtt tccagaatgt gctgccgaat ttcttcggcg
     4321 acttcctgta actgatcgat tttgagacgc cgaagatctg ccggcgagtt gatgttctga
     4381 agcaatttca tgcgcgcgag attgtaaacg gtaacctgag cttatgctac gaaaacagag
     4441 taatgctacc caaccattga cgcaagcgag
//
LOCUS       DATDBY010000176         9103 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1495479, whole genome shotgun sequence.
ACCESSION   DATDBY010000176 DATDBY010000000
VERSION     DATDBY010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 9103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9103
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1495479"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(292..774)
                     /locus_tag="VIT19_03320"
     CDS             complement(292..774)
                     /locus_tag="VIT19_03320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838039.1"
                     /translation="MRNPLVKLNAKFCLVLIIVLLPIGLAKAQPKCRKQPIKNLVEGF
                     AEAFANKTMGTLDAARPHVGRFTIRIEHSLADDDDPQRFEVRRFSSFARAEQWFKSRE
                     IEDLPGRYTRPVEKCARGVCSYNTEGGINHRSLYLTKITYGIRHGCPYIKTIYILDGD
                     "
     gene            complement(913..2022)
                     /locus_tag="VIT19_03325"
     CDS             complement(913..2022)
                     /locus_tag="VIT19_03325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838040.1"
                     /translation="MPKNQSANLALGLLVVLSALALSACSKQPAPVANQPAATPEPKM
                     EAQSANWKVTVQSVDKVARQPRDMFSGAGDEGPEQRFDTLQLTVDLTYSGAAGNVQSP
                     SAVLIDTKEQRIAALKAAVMTPGAIYTMSYGPGYSALSTSFTDLNQPTPAAAEKEKTD
                     KAMKELLAWVDPQVEASKTRTRPLAAGEKLTLIYYFQDPNEYTNLRLAFADVPPISLR
                     VKRDEPTPSPAAASASSPTPLDVKAQGESQNWKVIVTKVQKYPNDTTDPSQPRDSVEV
                     RLELIYKGPPRAVRPPTANLVSGQGAKNPGDIRSTTVMRWIFPDGPPEVGLRPGDDLS
                     VTFSFKDPKDDANLKLEYMDVAPISLPSPEPPAPD"
     gene            complement(2197..3801)
                     /locus_tag="VIT19_03330"
     CDS             complement(2197..3801)
                     /locus_tag="VIT19_03330"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5838041.1"
                     /translation="MRELGHGGMGYVYEAIDQRVNCLVAIKETITSDNEESRRAFERE
                     AALLANLRHRGLPKVMDYFSENEGDFLVMEFIPGRDLAELLDARGRAFSQPEVLHWAD
                     ELLSILVYLHSREPPILHRDIKPSNLKLSEDGELFLLDFGLAKGALGQMPTLVTSRSV
                     RGYTPVYAPLEQILGQGTDPRSDLYSVAATLYHLLTGVPPVDAPTRFHAVEDEKPDPL
                     AQIHAVNPQVAPNVSTFIGKAMGLSRKQRPSTANEMRHALKELAGEVKRQELDEYRNE
                     EERKKSEQEEARKRSEKNTLKREHLMAHVRGDRGISAPAPAPTLPAPPPEPISFERAA
                     PTRPESLPIDTVSQPWRRGLLVALGLFASVVVVVGVIWLANLFSRAPADQNENQTGTV
                     SSFPQSSPTALGSPTQAPSPTPIVARSINPPREFLEFVKGDEAYSADSIHVKEIDLNL
                     DGLPELIAQYQFCGSGGCYTHILRQNTEGGFQEIGGGVGEYLMPPLNRSAIRAGPTIM
                     NGYLDIQYDRLYFTFDGRRYQCARGC"
     gene            3947..4396
                     /locus_tag="VIT19_03335"
     CDS             3947..4396
                     /locus_tag="VIT19_03335"
                     /inference="COORDINATES: protein motif:HMM:NF020977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEY5838042.1"
                     /translation="MSLKDQIISDMTAAMKAQDAARTSTLRMVKAAIMNREKDGGGEL
                     TDEDIQKLLRTQVKQRRDSVEQYEKANRPDLADKEQAEIAIIEAYLPQSASQEEIDQA
                     VVAAIAETGASSMKDMGGVMKAAMAKLAGKSADGKMVSETVKAKLNQ"
     gene            4752..5282
                     /gene="rimP"
                     /locus_tag="VIT19_03340"
     CDS             4752..5282
                     /gene="rimP"
                     /locus_tag="VIT19_03340"
                     /inference="COORDINATES: protein motif:HMM:NF014617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000028 - ribosomal small subunit assembly
                     [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEY5838043.1"
                     /translation="MDQGSVAERVQKLAEQSAIDHGVELVHAEVAGPEGHPIIRVFID
                     KPEGVTHHDCSDVSHHLGTVLDVEDFIHSAYTLEVSSPGIERGLYKPTDYERFAGHLA
                     KIKSRAPIKNQRNFRGRIVGLADSEVIFEDNTSGRVRIPIGDIAKANLEIDVEEEFRK
                     AREREETDRHLIKQNS"
     gene            5346..7097
                     /gene="nusA"
                     /locus_tag="VIT19_03345"
     CDS             5346..7097
                     /gene="nusA"
                     /locus_tag="VIT19_03345"
                     /inference="COORDINATES: protein motif:HMM:TIGR01953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HEY5838044.1"
                     /translation="MSTTIAQNIEALCQEQGIDRELVIEAVKEAVRAAAKKQFRAGEE
                     IQVDWTPETGLELSASKVVVENVENPAAELSIEEARELGGDDVEVGDALLLPMPMEDL
                     GRIAAQTAKQILFQKVRDAVRTNVYDQYIDRVGELVNGFVKRFERGNMIVDLGNLEAI
                     LPRSQQSRGEQWNQGERIRVVITNVSKESKGPQIEVSRTSPELLERLFEMEVPEIYDG
                     TVVIKSCVREPGERAKIAVVSNERDVDPVGACVGMKGSRVQAIIRELRGEKIDIIEWS
                     EEPSVFAANALSPAKVNQVRITDIENRQMEVIVNEDQLSLAIGKRGQNVRLATKLVGW
                     NIDIRSEEELKKEVTEAMGAMIASGAPVPLSAIEGVTPQQTDALAEHGITDIDGLANT
                     TVDDLVEFLDVSLDEAEKVLEAARAVIALREQKLAEQDEAGGEEPNAVSAELDENAPA
                     TEVEPNEEMIAAGYDEAVEKGIPYQAEENIRAEHSADPVALTEADPMSADELLLQEAG
                     RDLRPDVITPSPDITSTAVADLEANIREEQAELAREEAEEAVTAEVQSQTETDSPLAS
                     SSDESAASESDKKQDLE"
     gene            7260..>9103
                     /gene="infB"
                     /locus_tag="VIT19_03350"
     CDS             7260..>9103
                     /gene="infB"
                     /locus_tag="VIT19_03350"
                     /inference="COORDINATES: protein motif:HMM:TIGR00487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEY5838045.1"
                     /translation="MSVATSKTRLYDLAKELKIDTKRLIEEVRREGVDVSVPSNSISK
                     ELAEKIREKYFPKQAATAKRAIKVVKKAARPVEETPPVEEPPAEAPVEIEAPPPEEVP
                     AEEIEEPKPQVMRVMRKLAPAVRAEKPEAVAPPAEAVPEDQPEATAHAAEAAPPEPQP
                     APPVGRQVRVMRPTAAALSQGIRHGERAPAPPPTATAATPRERVVRRGEYAGTPGETA
                     TPQTTYIPPPDAGRRRSRRGSVRGGKRMDGKGRTDRDFIAPEVRTLEERIAGRLQMPS
                     GPGELKPVRLVEGSTVKEFAEKLGIKPKEVVGLLLQRGVFATINQALNDTVAAELGMR
                     FGYEVSFVPFEEMVAEEEFEELIATDADDVEVPRAPVVTVMGHVDHGKTSLLDAIRTA
                     DVVAGEAGGITQHIGAYSVEVPSPDNADETRRVVFLDTPGHEAFTLMRARGAKATDVV
                     VLVVAADDGVMPQTIEAIEHSRAAGVPIVVAINKIDKPDANPDRVRQELSQQSLNAVS
                     WGGETEMVEVSAKKRENLETLLETILLTADILNLRASTTRLASGVVLEAKLDRGRGSV
                     ATVLVQQGTLKLGDPFIVGQIFGKVRAMFNDRGDAIAEAGPATPVEVLG"
BASE COUNT         2049 a         2487 c         2683 g         1884 t
ORIGIN      
        1 taataagggt tcggcttcgc cgcgcaccag tgcggtgagg cttggcggtt tcgctccgtc
       61 aggagcgaga tgtttataga aatcagcgaa accaaaacaa tttaagctcc gtaaggagcg
      121 acatttcgct ccttacggag ctttcccgct ttcttggaat gtagaactat aaacatttcg
      181 cccctgacgg ggcgacgagt tagcgtttta cgggcgtgac caaacagtaa gtggcggcaa
      241 tcttagcgaa gtttggcgga acaggctaga gattttcggc ggacaaaagg cctaatcgcc
      301 atccagtatg taaatcgttt tgatataagg acagccgtgg cgaatgccgt aagtgatctt
      361 tgtaaggtag agcgatcggt gattgatgcc accctcagtg ttataggagc agacgccgcg
      421 agcacacttt tccaccgggc gtgtatagcg gccgggcagg tcttctattt cccggctctt
      481 gaaccactgt tcggcgcggg caaaggacga gaaccttctg acttcaaatc tctgggggtc
      541 gtcatcgtca gccagtgaat gctcgatacg aatcgtgaac cggccgacat gtggtcgagc
      601 agcgtcgaga gtgcccatcg tcttgttcgc gaatgcttcc gcgaaccctt cgacaagatt
      661 tttgatcggc tgctttctgc attttggttg ggctttcgcc aaacctatgg gaagaagcac
      721 gataatcagg acgagacaaa acttcgcgtt tagtttcact agtggattcc tcatccgttt
      781 caaggttacg gcttccactg actgagctcg aggccgaaca aatccaggtt ccttttcaag
      841 tcagcggacg cgttggctgg gaaagaagcg ttggcgttca cgagattcat tctcatcggt
      901 ttagctctct cactagtcgg gagccggcgg ttccggcgaa ggtaaactga ttggcgccac
      961 atccatgtat tccagtttga ggttcgcatc gtctttcgga tctttaaacg aaaacgtcac
     1021 cgaaaggtca tctccgggcc gaagtccgac ctcgggcggg ccgtcaggaa agatccatcg
     1081 cattacggtt gtgctgcgaa tgtcgcctgg atttttcgcg ccctgaccgg aaaccagatt
     1141 tgcagtcggc ggtcttacgg cacgcggcgg tcctttgtat atcagttcaa gcctaacttc
     1201 caccgaatcc cggggttgtg aaggatcagt agtgtcgttc ggatacttct ggactttcgt
     1261 tacgatgact ttccagttct ggctttcgcc ctgggctttc acatcgagcg gcgtcggcga
     1321 acttgcggaa gctgctgctg gacttggcgt tggctcgtcc cgtttgacgc gcagggaaat
     1381 cggcggcacg tcggcgaacg ccagccttag atttgtgtac tcattaggat cttgaaaata
     1441 ataaatcaac gtgagctttt ccccggcggc caacggccgc gttctggtct tgcttgcctc
     1501 gacctgcgga tcaacccagg cgagaagttc cttcatcgct ttgtcagtct tctctttttc
     1561 tgccgccgcc ggagtcggct ggttgaggtc ggtgaatgaa gtactcaaag cgctgtaacc
     1621 gggaccatag ctcatcgtgt aaattgcgcc cggagtcatt acggccgctt tcaaggcggc
     1681 gattctctgt tctttcgtat cgattagcac tgctgagggc gactgcacgt tgccggctgc
     1741 gccggagtac gtaagatcga cggtaagctg aagggtgtcg aatcgttgtt ccggcccttc
     1801 gtcgcctgca ccggagaaca tgtcacgtgg ctggcgcgcc accttgtcga ctgattgcac
     1861 ggtgaccttc cagttcgcac tttgagcttc catcttcggc tccggagtcg ccgcgggttg
     1921 gtttgcaacc ggggctggtt gcttcgaaca tgctgagagc gcgagcgcac tcaaaacgac
     1981 gagaagtccc aacgccagat ttgccgattg attcttaggc atctgttagt ctcctgatgg
     2041 aattggattc cgcgggcggc tcctattaag aaaacccggt caatgctatt agcgcagaat
     2101 tttggcgaca ggtatcatcc gcacgaaaaa ctagagtcgt tgattcaaac cgggtttaga
     2161 gcaaggagcc cgacacgcct cagtgaccat tcatcgtcaa caaccgcgcg cgcactgata
     2221 tcgtcgaccg tcgaacgtga agtacagacg gtcatattgg atgtccagat agccgttcat
     2281 aatcgtagga cctgctctta ttgctgatcg attcaatggc ggcattaaat actcgcctac
     2341 tccaccgcca atttcctgaa agcctccttc ggtattttgg cgaagaatgt gtgtgtagca
     2401 tccaccggaa ccgcaaaatt gatattgcgc aattaactca ggcagtccgt cgagattcag
     2461 atcgatttcc tttacatgaa ttgagtccgc tgagtaagcc tcgtcacctt taacgaactc
     2521 gagaaattcg cgcggcggat tgatcgatct cgcgacaata ggcgtgggcg aaggtgcttg
     2581 cgtcggcgac cccagcgcgg tgggtgagga ttgtgggaac gagctcactg tcccggtttg
     2641 attttcgttt tgatcggcag gcgcgcgaga aaacagattg gcgagccaaa tgacaccgac
     2701 aacaacgacg acgctggcga atagtccgag ggcgaccaac agtcctcgtc gccacggttg
     2761 agagacagtg tcgatcggta acgattccgg ccgagttggg gctgcccttt caaatgagat
     2821 tggttcgggc ggcggcgctg gcaaagttgg cgctggtgcg ggcgcggaaa tcccgcgatc
     2881 cccacgaacg tgcgccatca ggtgttcgcg cttaagagta tttttttccg agcgttttcg
     2941 agcttcctcc tgctcgctct tttttcgctc ttcttcgttt cggtactcgt cgagttcttg
     3001 ccgtttaact tctccggcca gttcttttaa ggcatgtcgc atttcattgg cggtagaagg
     3061 acgctgtttt ctgctcagcc ccatcgcctt gcctatgaac gttgaaacat tcggggcgac
     3121 ctgcggatta accgcatgaa tctgcgcgag cgggtcgggc ttttcatcct cgacggcgtg
     3181 aaaacgcgtg ggcgcgtcaa ccggcggaac gcccgtgagc aggtggtaga gcgtcgcggc
     3241 gacagaatac agatcgctgc gcggatcagt tccctgaccc aggatctgtt caagcggcgc
     3301 ataaaccgga gtgtacccgc ggacgctacg actagtgacg agcgtcggca tttgccccag
     3361 cgcacccttc gctaaaccga aatccaaaag aaacaactct ccgtcttcgc ttaacttcag
     3421 atttgagggt tttatgtcgc gatgcaggat tgggggctcg cgcgagtgca gatacaccag
     3481 aatcgagagg agctcgtccg cccaatgcag gacctctggt tgtgagaatg cacggccgcg
     3541 ggcatcgagc agctccgcca aatccctccc cgggatgaat tccatcacga gaaaatcgcc
     3601 ttcattctca ctgaagtaat ccatcacctt gggcagacca cggtggcgga gatttgccag
     3661 cagcgccgcc tcacgttcaa acgctcgtcg cgactcttca ttgtcgcttg ttatggtttc
     3721 tttgatcgcg acgaggcaat tgacccgttg atcgatggcc tcgtacacat agcccatccc
     3781 accatgaccg agttctcgca agacgcggta ccgttcctgg aggatagtgt tcggagaaag
     3841 cattctttgg aaagagtcgc tgcggtgacc agcctgcgag cgctgaccca aaacgcgcgc
     3901 atcttagcga aatcaccgga gatgcgctag agttttcgcc aagactatga gcctgaaaga
     3961 tcaaatcatt tccgacatga ccgccgcgat gaaagcgcag gatgcggcgc gaacttcgac
     4021 tttgcggatg gttaaagccg ccatcatgaa ccgtgaaaag gacggtggcg gcgaattgac
     4081 tgacgaggac atccagaagc tccttcgtac gcaggtcaag caacgccgcg actcagtcga
     4141 gcagtatgag aaggccaacc ggccggattt ggctgacaaa gagcaggctg agatcgccat
     4201 catcgaggct tatctgccgc agtctgcttc acaggaagag atcgaccagg cggtcgtggc
     4261 ggcaatcgcc gaaacgggcg catcgtcaat gaaagacatg ggcggggtga tgaaagctgc
     4321 catggccaag ctggcgggaa agagtgctga cgggaagatg gtcagtgaaa ctgtgaaggc
     4381 aaagctcaat caatagctcc gtggtttggg aacgcggacg cccctcgtcc gctgtctaac
     4441 accgacggtc aacactggtc gctccggatt ctaaggcaaa tgaagcagat tgcggacgag
     4501 ggcgtccgcg ttcccggcag tctggattct ggggcgaacg acgcagattg cggacgaggg
     4561 cgtccgcgtt ccggttccca gcggtttgcc tcgcctccct cctttccgta taatcccagt
     4621 ttcttatcgg ggcgtcgtcg ttgtccggtg ggttttcgcc cactttttct tttgggcgga
     4681 atagtggcac agacttcagt ctgtgagtat ttcagagagg cagtcacaga ctaaagtctg
     4741 tgccacggtc aatggatcag gggtcggttg cagagcgcgt tcagaaactt gccgagcaat
     4801 ccgccatcga ccacggcgtc gaactggttc acgcggaagt cgccggcccg gaaggccacc
     4861 cgataatccg agtgttcatt gataagccgg aaggtgtcac gcaccacgat tgctcggatg
     4921 tgagtcatca cctgggcact gtgctggacg tggaggactt catccactcg gcttacaccc
     4981 tggaagtttc cagtcccggg atcgagcgcg ggctgtacaa gccgacggat tacgagcggt
     5041 ttgcgggaca tctcgcgaaa atcaaaagtc gcgcgccgat taagaaccag cggaactttc
     5101 gcggccgaat tgtcggactc gctgacagcg aagtgatttt tgaagacaac accagcggcc
     5161 gagtacggat tccgattggc gacatcgcga aagcgaacct ggaaatcgac gtcgaagagg
     5221 aattccggaa agcacgcgag cgtgaagaaa ctgaccggca tttgatcaaa cagaatagtt
     5281 aagtggcacg cgcatcttgc gcgtgatttc acgggcgaga cgcccgtgcc acctcgaaag
     5341 caaacatgag caccaccatc gcgcaaaaca tagaagccct ttgccaggag caaggcatcg
     5401 accgcgagtt agtaatcgaa gcggtgaagg aagccgtgcg cgcggcggcc aagaaacagt
     5461 tccgcgccgg cgaagaaatt caggttgatt ggactcccga aacgggtctc gaattatcgg
     5521 cgtcgaaagt cgtcgttgag aacgtcgaga atcccgcggc ggaattgtcg atcgaagaag
     5581 cgcgcgagct cggcggtgat gatgtcgaag tcggtgacgc tttgttgctg ccgatgccga
     5641 tggaagacct cggccgcatc gcggcgcaga ctgccaaaca aatccttttt caaaaagtcc
     5701 gcgacgcggt ccgcacgaat gtttatgacc agtacatcga tcgcgtcggc gaattggtga
     5761 acggcttcgt gaagcgtttc gagcgcggca acatgattgt cgatttggga aacctggaag
     5821 ccatcctgcc gcgttcacag cagtcgcgcg gcgaacagtg gaaccagggc gaacgcattc
     5881 gcgtcgtcat caccaacgtt tcgaaagaat caaaaggccc gcagatcgaa gtctcgcgca
     5941 cttcacctga attgctcgag cgcctgtttg aaatggaagt gccggagatt tacgacggta
     6001 ccgtcgtgat caagtcctgc gtccgtgaac ccggcgagcg cgccaagatt gctgtcgttt
     6061 ccaacgaacg cgacgtcgat ccggtgggcg cctgcgtcgg catgaaaggc tcgcgcgtcc
     6121 aggccatcat ccgggaactg cgcggcgaga aaatcgatat catcgaatgg tcggaagagc
     6181 cttcggtttt cgcggccaac gctctgtcac cagccaaggt taatcaggtt cgcatcaccg
     6241 acattgaaaa tcgtcagatg gaagtgatcg tgaacgaaga tcagctcagc ctggccatcg
     6301 gcaagcgcgg tcagaacgtg cgtttggcga caaaactggt cggctggaac atcgacatcc
     6361 gcagcgagga agagctgaag aaggaagtta cggaagccat gggggccatg attgcctccg
     6421 gcgcaccggt cccgctttcg gcgattgaag gtgtgacgcc acagcagacc gacgctttgg
     6481 ccgaacacgg catcacggat attgacggat tggcgaacac cacggttgac gacctggtgg
     6541 agttcctcga cgtcagtttg gatgaagccg agaaggtgct tgaggctgcg cgcgctgtga
     6601 ttgcgttacg cgagcagaaa ttggctgaac aagacgaagc cggcggcgaa gaaccgaacg
     6661 ccgtttccgc tgagctcgat gaaaatgcac cggccacgga agtcgaaccc aacgaagaaa
     6721 tgatcgctgc gggttacgac gaagccgtcg aaaaaggcat tccgtatcag gccgaagaaa
     6781 acattcgcgc tgagcattct gccgatccgg tggcgctgac tgaagccgat ccaatgtcag
     6841 cagatgagtt gctgttgcag gaagccggac gcgatctcag gccggacgtt attacaccgt
     6901 cgcccgatat cacttcgacg gccgtcgcgg atttggaagc gaacatccgc gaggaacagg
     6961 ctgaactggc ccgagaagaa gccgaagagg ctgtcaccgc tgaggtgcag tctcaaactg
     7021 aaactgattc ccctctcgca tcgtcatcag acgaaagtgc cgcgagcgag agtgacaaaa
     7081 agcaagatct cgaatgaggt ctcagatgtt taatctgaaa gccatgtcaa atcatgcggc
     7141 caattaatcg cagtttgcgc aaaggcgcaa ggctgctcgc ctccgacgct tgctcatagc
     7201 aagcgcctct gaagtgcgct tcagaaggtg gcgaacagcc actttcaaag aaggagcgca
     7261 tgtcagtagc cacttcaaaa actcgccttt acgatctcgc caaagagctg aagatcgata
     7321 ccaaacgcct tatcgaagag gtgcggcgcg aaggtgtcga cgtcagtgtt ccctcgaact
     7381 ctatttcgaa agagctcgct gagaagatcc gcgagaaata ctttccgaaa caagcggcca
     7441 ctgccaagcg cgccatcaaa gttgtaaaga aggccgcgcg cccggtcgag gaaacaccgc
     7501 cggttgaaga accgccggcc gaggctcctg tcgaaatcga agcgccaccc cccgaagagg
     7561 ttccagccga agaaatcgag gaaccaaagc cgcaagtcat gcgggtgatg cgcaagctgg
     7621 ctcccgccgt gcgcgcggaa aaacctgaag cggtcgcgcc gccggctgag gctgtgccgg
     7681 aagatcaacc ggaagccacg gcacatgcgg ccgaagctgc accccctgag ccgcaacctg
     7741 cgcctcctgt gggacgacag gtgcgcgtca tgcggccgac tgcggccgcg ttaagccagg
     7801 gcattcgaca cggtgaacgc gcccccgcgc cgccacccac ggcaaccgca gcaactccac
     7861 gcgagcgtgt agttcgtcga ggcgagtacg ccggcacacc gggcgagacc gcgacaccgc
     7921 aaaccacata cattcccccg ccggatgccg gtcgacgtcg ttcgcgacgc ggttcggtac
     7981 gcggcggcaa acggatggac ggcaaaggaa gaacggaccg cgactttatt gctccggaag
     8041 tgcggacgct tgaagagcgc atcgccggcc gtttgcaaat gccttcaggg ccgggcgagc
     8101 taaagcccgt gcgcctggtc gaaggttcga ccgtgaaaga gtttgccgaa aagctgggca
     8161 ttaagccgaa agaggtcgtg ggtttgttgc tgcaacgtgg tgtgttcgcg acgatcaacc
     8221 aggctttgaa cgacaccgtg gccgctgaac tcggcatgcg ctttggttat gaagtctcgt
     8281 ttgtgccatt tgaagaaatg gtcgcagagg aagagttcga agaactgatc gcgaccgacg
     8341 ccgatgacgt tgaagttccg cgcgcgccgg tggtcacggt catgggtcac gtcgatcacg
     8401 gaaagacttc gctgctcgac gcgattcgca cagcggacgt cgtcgccggc gaggcgggcg
     8461 gcattaccca gcacatcggg gcatacagcg tcgaagtgcc gagtcctgac aacgccgacg
     8521 agacgcgccg cgtcgtgttc ctcgatacgc cgggccacga agcatttacg ttgatgcgtg
     8581 ctcgcggagc gaaagcgacc gacgtggttg tccttgtcgt cgcggctgac gacggcgtga
     8641 tgccgcagac gattgaagcg atcgaacact cgcgcgccgc cggggtgccg atcgttgtcg
     8701 cgatcaacaa gatcgataag cctgacgcga atccggatcg cgttcgccag gaattgtctc
     8761 aacaaagtct gaacgctgtt tcgtggggcg gcgagaccga aatggtcgaa gtttctgcga
     8821 agaaacgcga gaacctcgag acgctgctcg aaactattct gcttaccgca gacattctga
     8881 acctgcgcgc cagcacgacg cgcctggcct caggtgtcgt gctggaagcc aagctcgacc
     8941 gcggacgtgg ttcggtcgcc accgtgctcg tccagcaagg cacactgaag ttgggcgatc
     9001 cgttcatcgt cggacaaatc ttcggcaagg tgcgcgcgat gttcaatgat cgcggcgacg
     9061 ccatcgctga agcaggcccg gcgacccccg tcgaagtgct cgg
//
LOCUS       DATDBY010000177         2543 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2283263, whole genome shotgun sequence.
ACCESSION   DATDBY010000177 DATDBY010000000
VERSION     DATDBY010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2283263"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..1116)
                     /locus_tag="VIT19_03355"
     CDS             complement(61..1116)
                     /locus_tag="VIT19_03355"
                     /inference="COORDINATES: protein motif:HMM:NF017864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEY5838046.1"
                     /translation="MTNTDCAAPLVEVWRGPIVESLHRGHLVAVDGNGKAVAELGAPQ
                     TVTFIRSSGKPFQAIPLITSGAADRFGFTDQEIAIACGSHSGEAIHVETVQSMLKKIG
                     LGEDALKCGVHVPFSAEVARELAENHQEPNVLQNNCSGKHAGMLAVAKHLGAPLESYD
                     EPSHPVQRLILQTVSKFSGIPADEVVIGTDGCAAPVFGMAVRAMALMYARLVSPSADF
                     EPPVTDAGLRLVNAMIRFPEMVGGSKDRLDTEMIRAGNGRLISKIGAEGVYTVGVLPC
                     ADWPNGLGLALKVEDGDDRRARPPAVIEALRQLGVLSESEITALAAYAPTPITNRRGE
                     RVGEARAAFSLNVARHK"
     gene            complement(1223..1795)
                     /locus_tag="VIT19_03360"
     CDS             complement(1223..1795)
                     /locus_tag="VIT19_03360"
                     /inference="COORDINATES: protein motif:HMM:NF018437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3D domain-containing protein"
                     /protein_id="HEY5838047.1"
                     /translation="MKKLSIILGSAFGVLLVFSVISYAQKYMPQDPKPAVKQPVLEVA
                     GQIPEDETTPAEAPKTAPVAKLVDVIERPTETYSATAYSLRGRTASGQYVSRGLIAAD
                     PRHLPLGTRVRLEAGPWSGDYLVADTGGVIKGRKIDIWTPSTREALQFGRRNVKLTVL
                     SLPVKRAKTKATRARVVTPPPAAMATTAKQ"
     gene            complement(2196..>2543)
                     /locus_tag="VIT19_03365"
     CDS             complement(2196..>2543)
                     /locus_tag="VIT19_03365"
                     /inference="COORDINATES: protein motif:HMM:NF044424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838048.1"
                     /translation="AVGAGQLAAHRENKARARYEGKTYDSAQSVADFFKNRATRMGQP
                     ETFRSPQKPKQTVQSGPAADALPGSYVRHAKYGRGLVLRREGSGDQTKLTVSFPGYGQ
                     KKLVEKYAGLEKA"
BASE COUNT          500 a          730 c          741 g          572 t
ORIGIN      
        1 cgatgcgccc accggcatcg cgcaggagag cgggttcgtt tggcgtggtg ctgggcgtgc
       61 tcatttgtga cgggcgacgt tgagagagaa ggccgcgcgc gcttcgccaa cacgctcacc
      121 ccgtcgattt gtgatgggcg tgggcgcgta cgccgcgagt gccgtgatct cgctttcgct
      181 tagcacgccc agttgccgaa gcgcctcaat taccgccggc gggcgcgcgc gccggtcgtc
      241 accgtcttcg acttttagtg ctagacccag cccatttggc caatcggcac agggcaaaac
      301 gccaactgtg tacacgcctt cagcaccaat tttcgagata agccggccat ttcccgcgcg
      361 aatcatctct gtgtccagac gatctttaga cccgccgacc atttccggaa accggatcat
      421 cgcgttaacg aggcgcaggc cagcgtctgt caccggcggc tcgaaatcgg ccgaggggct
      481 taccagccgt gcgtacatca aggccatggc ccgcacagcc atgccgaaga ctggagccgc
      541 gcagccgtcc gtcccgatga caacttcatc cgcaggaata cccgaaaact tcgaaacagt
      601 ttgcagaatc aatcgctgga caggatgcga aggctcgtca taactctcaa ggggcgcacc
      661 caggtgcttc gcgacggcca gcattcctgc atgcttaccg gagcaattgt tttgcaggac
      721 gttgggctcc tgatggttct cagccaactc acgcgcgacc tcggcgctga atgggacgtg
      781 tacgccgcac ttgagcgcgt cttcgcccaa gccgatcttc ttcagcatcg attggacagt
      841 ttcgacatga atcgcttcgc cactgtgaga tccgcaggcg atggcaatct cctgatcagt
      901 gaagccaaac cgatcggcag cgccggaggt gattagcgga atggcttgaa acggctttcc
      961 tgaggaacga atgaaagtta cagtctgcgg cgcaccgagt tccgccactg ctttaccgtt
     1021 gccgtcgacg gcgactaagt gcccacggtg tagcgattcg acaatcgggc cgcgccatac
     1081 ttcgaccagt ggagctgcgc aatctgtgtt ggtcacgatg ccagcatctt aatgttgccg
     1141 tgaaaaaaaa gaaaagcggg attgctcccg cttcaatcga cactgttttg tgaattgctt
     1201 gaatgaacgc cgcggtctac ttctactgct tcgcagtggt tgccattgcg gctggcggcg
     1261 gcgtcactac tcgcgcacga gtcgctttcg ttttggcgcg tttaaccggc agtgatagga
     1321 ccgtcagctt tacgttacgg cgaccgaatt ggagcgcttc tctggtggat ggagtccaaa
     1381 tgtcgatctt gcggcccttg atcacgccgc ccgtatcagc gaccaggtag tcgccactcc
     1441 acggaccggc ctcgagccga acccgggtgc caagcggaag gtgtcttggg tcggcggcaa
     1501 tcaatccgcg cgaaacatac tgcccgctgg cagtccggcc gcgcaggctg taggcggtgg
     1561 ccgagtaggt ttccgttggt ctctcgataa cgtcaaccag ctttgccaca ggggcagtct
     1621 tcggcgcctc agcgggcgta gtctcgtcct caggtatctg gcccgcgact tccagaaccg
     1681 gctgcttaac ggccggcttc gggtcttgcg gcatgtactt ttgggcgtag gaaattactg
     1741 aaaagacgag aagcacacca aaagcgcttc ccagaatgat ggataacttc ttcaagtcgg
     1801 gttctcctgt ccgatagttt tgtgccaact tttcagcagc gggcgcgcga gtcgggattc
     1861 tgtgactcga cctccggctt ggagactgaa gcagtgaaag ccgaagctag ggcttagttc
     1921 tcttgttctc tttaacgctg cgctgaaaag acctgtcagt cgcccttgtt ctggcggcga
     1981 tgacttcagt tagataaagc ctaagaaatc aaaaagaaag cgaacccttt tgttgagggt
     2041 tcgcctttga accggggaaa aggctagcac agggatctgg tcatgtccat cgaacggcgg
     2101 catccgcagt gtacgatttc attgcaaaat atttgtgagt gagttgtgat tccggtcggt
     2161 ggatttcgag gcttgggagt aacttgctgg aatggttagg ctttctccag cccggcgtac
     2221 ttttccacca attttttctg gccgtagccg ggaaaactga cggtcaactt ggtttggtcg
     2281 ccagagcctt ctcgacgcag aaccaggccc cgtccgtact tcgcatgacg cacatacgac
     2341 cctggcaggg cgtccgcggc ggggccgctc tgcacggttt gtttaggttt ttgcggagat
     2401 cgaaaggtct caggctgacc cattcgggtc gctcggttct tgaaaaagtc agcgaccgat
     2461 tgggcgctat cgtaggtctt tccttcgtac cgcgcccgcg ctttgttctc tcgatgggcg
     2521 gccaattgcc cggcgcctac cgc
//
LOCUS       DATDBY010000178         2006 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_848978, whole genome shotgun sequence.
ACCESSION   DATDBY010000178 DATDBY010000000
VERSION     DATDBY010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_848978"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..990)
                     /locus_tag="VIT19_03370"
     CDS             complement(<1..990)
                     /locus_tag="VIT19_03370"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HEY5838049.1"
                     /translation="MADKKDKPTNAKLDADAFERELTTDLDAETPDKPKGWPLHTRIL
                     IGLAVGVIAGVTVNWIFGGDHPRVAWVVDHFTNPIGQLFLRLLLMIVVPLVFASLVVG
                     VAGIGDIRKLGRVGLKSFAYCLVLSAISVVIGLTLANTIKPGTRVDPATRDALKLRFS
                     TDATKQVEAAKKSATVKTPLMQVVETIVPSNPFAAISGVPSNPSQASEPANPNMLHLM
                     FFGLVIGIAVTLLPVKVTAPFLSFMQGLYEITAKIIEMIMKFAPFAVACLLFNNTARF
                     GLDLLQALGWFVVTVLLGLSLHMFGVYSLSVALLSRLSPIDFFRRIKTVILTAF"
     gene            complement(1135..>2006)
                     /locus_tag="VIT19_03375"
     CDS             complement(1135..>2006)
                     /locus_tag="VIT19_03375"
                     /inference="COORDINATES: protein motif:HMM:NF039482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HEY5838050.1"
                     /translation="IKRIGVVVKPHQPDALATLCRLTEWLNQLNVSLVGTPDLDHERI
                     EHETGCVVPVVANEEIARQVDMMLVLGGDGTMIATSRLIGDTEVPVMGVNYGGMGYLA
                     EFRIEEMFAALEPILAGDYKLERRLMLAVELLRGDDLVTRNRVLNDVVVNKSALARII
                     EIETYLDGQFVNSFRADGLIVATPTGSTAYNLSAGGPIIFPSMNAVVITPICPFTLSN
                     RPIVVPDDSLIEVRLKTEKEEVALTLDGQVGFPLAAGDHVVIRKSKTTFNLVQPKNRN
                     YFDLLRDKLKWGR"
BASE COUNT          455 a          568 c          569 g          414 t
ORIGIN      
        1 aaatgcggtg agaatgacgg tcttgatgcg tcggaagaaa tcgatcggcg atagacgcga
       61 caagagcgcc accgataatg agtacactcc aaacatgtgc agcgagagtc caagcagcac
      121 cgtgacgacg aaccaaccca gggcctgcaa caggtcaaga ccgaagcgcg cggtgttatt
      181 gaacagcagg cacgcgaccg cgaacggcgc aaacttcatg atcatttcga tgatcttggc
      241 cgtgatttca tagagtccct gcatgaaact caggaaaggc gcagtgacct tcacgggcag
      301 aagcgtgacg gcgataccaa tcaccaaccc gaagaacatc aggtgaagca tgttcggatt
      361 tgcgggctca ctggcctgac tgggatttga cggcacgcct gagatggcgg cgaaaggatt
      421 cgacggcacg atcgtttcga cgacctgcat cagaggcgtc ttgactgtcg cgctcttttt
      481 cgccgcctcg acctgcttcg tcgcatcagt gctaaaccgt agcttgagcg cgtcccgggt
      541 tgcgggatcg acgcgcgtgc ctggtttgat tgtgttcgcc agcgttaagc cgataacgac
      601 ggatatcgct gacagaacca ggcagtaggc gaaggacttg agaccgacgc gacccagttt
      661 gcgaatgtca ccaatgcctg ctacgcccac gaccaatgat gcaaagacga gcggcaccac
      721 gatcattaac agcaggcgaa gaaagagctg gccgatagga ttcgtgaaat gatcgaccac
      781 ccaagcgacc cgcggatggt cgcctccaaa aatccaatta actgtcactc ccgcgatcac
      841 accaacagcc aatccgatca aaatccgcgt gtgcagcggc cagcctttag gcttgtccgg
      901 agtctctgcg tcgaggtcgg tggtcagttc gcgctcgaat gcgtcggcat cgagttttgc
      961 gttggtcggt ttgtcttttt tgtcggccat gtggattttc agcctcgcgt ttggagttcg
     1021 actctcacgc ccttcctatc gagcacccca cgcgagatgc tcgcgcgggg accccgcttt
     1081 gtcgggctac tgcactagct gcctgctgct cactgctcac cgcccactgc cgtactatcg
     1141 tccccacttc agtttgtcgc gcagcaggtc aaagtaattc cgattcttcg gctggacgag
     1201 attaaaagtg gtcttgctct tgcgaatcac gacgtgatcg ccggcagcca aaggaaaacc
     1261 aacctgaccg tccagcgtaa gggcgacttc ttctttttca gtcttcaagc gcacttcaat
     1321 taacgagtcg tcaggaacaa cgatgggccg gttcgaaagc gtgaacggac agatgggtgt
     1381 aatcacgacg gcgttcattg acggaaaaat tatcgggccg ccggcggaaa ggttgtaggc
     1441 cgtcgagccg gtcggtgtgg ccacgatcag cccgtcagcg cgaaatgaat tcacgaattg
     1501 accgtcaaga taagtctcga tttcgatgat gcgcgcgagt gctgacttat tcacaaccac
     1561 gtcattcagc acgcgattgc gggtgacaag gtcgtcgccg cggagcagct caaccgccag
     1621 catcaaccgt cgttccagtt tgtagtcgcc ggccaggatt ggctcgagtg cggcgaacat
     1681 ttcttcgatg cgaaactcgg cgagataacc catcccgcca tagttcacgc ccatcacggg
     1741 cacctcggtg tcgccgatca atcgagacgt cgcgatcatc gtgccgtcgc cgccgagaac
     1801 gagcatcata tcgacctggc gggcaatctc ttcgttcgct acgacgggaa cgacgcagcc
     1861 ggtttcgtgc tcaatgcgct cgtgatcgag atcgggcgtt ccgacgaggc tgacgtttaa
     1921 ttgattgagc cactcagtga ggcgacaaag cgtggcaagc gcatccggct gatgcggttt
     1981 aacgacaacg ccgatgcgtt tgatgg
//
LOCUS       DATDBY010000179         4964 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_84157, whole genome shotgun sequence.
ACCESSION   DATDBY010000179 DATDBY010000000
VERSION     DATDBY010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4964
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84157"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2820)
                     /locus_tag="VIT19_03380"
     CDS             complement(<1..2820)
                     /locus_tag="VIT19_03380"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838051.1"
                     /translation="MKDTCRSTRDLRGLLLAIAGFALTAVTLGALAVGAQNPAASQSP
                     SATQTPAPTRAATATPIPSPTPTPINWSNDPLLRRFVFRAIGPASMGGRIDDIACVET
                     NSYVCYIGFATGGVWKTTNNNTTFQPIFDTYSSASIGDIAIAPSNPDIVWVGTGEPNN
                     RQSSSFGDGIYKSSDGGKTFAKMGLEDSQSIARIVIDPKDANTVYVAVLGHLFGPNKE
                     RGIYKTTDGGRTWNNVKFIDEDTGFTDLVMDMSDPKTLYAASYQRRRTSWGFNGGGPG
                     SGIWKTTDAGRTWAKLQGSGLPEGLLGRIGLDLGRSNSNVLYAQMEVGASSGTGGEEQ
                     TPGAATPTPTPSPSATPIGSPTPNPKRSGVWRSDDKGKSWRIVSNENNRPMYYSQIRV
                     DPSNPENVYVGGLNFSKSTDGGKTFVSMQANVGHVDNHAIWIDPKNGNHIVLGNDGGL
                     NVTYDQGVTWDFINTIAAAQFYAIGVDMRKPYYVYGGLQDNGSWGGPSQTRNPAGITN
                     ADWYRVAGGDGFYAMADPTDYNTVYAESQNGNMSRIDLRTGRSVSIRPRGRPRGGGGG
                     GGGGGARPGASPSPGASPRATPQDPQSALAQFAAQQGFGGANLQSNVVPVPSPGEQFR
                     FYWNTPMVLSPHNPRIIYAGGDRFFRSLDRGDTWTASPDLTKRINRNNLSIMGVKGTE
                     PMASKNDGYNGYGYVVSIAESPAIPGIIWIGTDDGTVQISRDSGATWTNVSRKVPVLG
                     EKSGELYHISKIEPSRFDAGTAYLAVDGHRLDDLKPYLYVTRDYGETWSSIVSNLPAN
                     GNVNVVREDPRNKDLLFVGTEYGLFVSIDGGREWRQFMSGLPTVRVDDLLIHPRDNDL
                     IVGTHGRGIYILDDITALQQLTRSKVLDTEIFLFDVRPATQWLNDVRLSRYSGGSKLY
                     RAANPAPGTAISYYLKSVPAGDVTIT"
     gene            3151..3774
                     /gene="lexA"
                     /locus_tag="VIT19_03385"
     CDS             3151..3774
                     /gene="lexA"
                     /locus_tag="VIT19_03385"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEY5838052.1"
                     /translation="MLPRTQRQKEVLDYITRFLAKHGHEPSYAQIARHFGVSSKATIA
                     KHIAALEKRGLVKRQHEPGHFTLAVRFEEAAADATCEVPLVGRIAAGLPIDAIQDVEM
                     ICVPRFLLGRVRPERIYALRVKGDSMIDEHICDGDIALIESRSEARDGEIVVALIDQT
                     RATLKRLFRRGQEVELRPSNAAVEPIRVHASRVEIQGIFRSLLRPSV"
     gene            3840..3965
                     /locus_tag="VIT19_03390"
     CDS             3840..3965
                     /locus_tag="VIT19_03390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838053.1"
                     /translation="MILTLLHHEGLIQGAQILQAVVALGWMALGCGVIKLWWRKK"
     gene            complement(3978..>4964)
                     /gene="ligD"
                     /locus_tag="VIT19_03395"
     CDS             complement(3978..>4964)
                     /gene="ligD"
                     /locus_tag="VIT19_03395"
                     /inference="COORDINATES: protein motif:HMM:TIGR02779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HEY5838054.1"
                     /translation="ARMPEIIHPMLATLVDEPFSDPDWIFETKWDGFRSVCFVSKGSA
                     RFVSRNQIEMTPQYPELANIPKQIDAKEAILDGEIVALDEDGRPQFQLLQNKLRIRSG
                     SYAKARTAQLVYFAFDLLHLDGYDLIGCPVVERKARLEQILRPASFLKYSDHVEGEGE
                     AFFHEIAKFRLEGMIAKRAASKYAQKRTSDWLKVKTVKRSEVVIGGYTQPRGARSYFG
                     SLVMGLYRESKLHYVAHVGGGFKEQKLREIHKLLQPLKTDKCPFAVKPKTNEPVQWVK
                     PKLVAEVKFSEWTADERMRHPVFVGLREDKKPRDCKFEFERDTEQTVRKRRR"
BASE COUNT         1035 a         1465 c         1377 g         1087 t
ORIGIN      
        1 tgtgatcgtc acatcacccg ccggtacgga cttcaggtaa tagctaatgg cggttcccgg
       61 cgccgggttc gcggcgcgat agagcttcga cccgccgctg tagcgactca aacgaacgtc
      121 gtttagccac tgcgtcgccg gccgaacgtc gaacagaaag atttcggtgt cgagcacttt
      181 actgcgcgta agctgttgca gcgccgtgat gtcgtcgagg atgtaaatcc cgcgaccgtg
      241 cgtgccgacg atcagatcat tgtcgcgcgg gtgaatcagc aaatcgtcaa cccgcacagt
      301 cggcaggccc gacatgaatt gtcgccattc gcggccgcca tcgatcgaca cgaacagacc
      361 gtactcagtt cccacaaaca gaagatcttt gttcctggga tcttcgcgaa ccacattcac
      421 gttgccgttc gccggcaaat tgctgacgat tgaactccac gtctcaccgt aatcacgcgt
      481 cacatacagg tagggcttca gatcgtccag acggtgtcca tcaaccgcga gataagctgt
      541 gcctgcatcg aaacgcgaag gctcaatctt gcttatgtga tacagctcgc ctgacttttc
      601 gccgagtacg gggaccttcc tggaaacgtt cgtccacgtc gcgccactgt cgcgactgat
      661 ttggacagtg ccgtcatcag ttccgatcca gatgatgccg ggtatggccg gcgattcggc
      721 gatcgacacc acatatccgt agccgttata gccgtcgttc ttggaagcca tcggctcggt
      781 gcctttcaca cccattatgg aaaggttatt gcggttgatt cgcttcgtca gatcgggtga
      841 agcagtccac gtgtcgcccc gatcgagcga gcggaagaac cgatcgccac cggcgtaaat
      901 gatccgcgga ttgtgcggag acaaaaccat cggcgtgttc cagtagaagc ggaactgctc
      961 gccgggtgaa ggcaccggca cgacattcga ttgcaaattg gcgccaccaa aaccctgctg
     1021 tgctgcaaat tgagccagag cactttgcgg atcctgcggc gtggcccgcg gagaggcacc
     1081 gggtgatggc gaggcgccgg gccttgctcc acctccacct ccaccgccgc ccccgccccg
     1141 cggacgcccg cgcggccgga tgctgacgct gcgaccggtc cgcagatcga tccggctcat
     1201 gtttccgttc tgcgattcgg catagacagt gttgtagtca gtcggatccg ccatcgcgta
     1261 gaatccgtcg cctccggcga cgcgatacca atccgcgttc gtgatgcccg cggggttgcg
     1321 tgtctggctc ggcccgcccc acgaaccgtt gtcctgcaaa cctccgtaga cgtagtaagg
     1381 cttacgcatg tctacgccaa tcgcataaaa ctgcgccgct gcgatcgtat tgatgaagtc
     1441 ccaggtgacg ccttgatcgt aggtgacgtt cagcccgccg tcattgccga gaacaatgtg
     1501 gttgccattc ttcggatcga tccagatggc gtggttgtcc acgtgtccga cattcgcctg
     1561 catcgaaacg aaggtcttgc cgccatccgt tgacttgcta aagttcaagc caccgacgta
     1621 aacattttcc gggttcgaag gatcgacgcg aatctggctg tagtacatcg gccggttgtt
     1681 ttcgttgctc acgatgcgcc agcttttgcc cttatcgtct gagcgccaaa cacccgatcg
     1741 ctttggattc ggagtgggtg agccaatcgg tgtcgcgctg ggcgagggcg tcggagtggg
     1801 cgtcgccgcg cccggggtct gttcttcgcc accggtaccg gagctcgcgc caacttccat
     1861 ttgcgcatag agcacgttcg aatttgatcg tcccaggtcc aaaccgatgc ggccgagaag
     1921 gccttcaggc aatccgctgc cttgcagctt cgcccaggtc ctgcccgcgt cggtggtttt
     1981 ccagattcct gatcccgggc cgccgccatt aaatccccat gacgtccgtc gccgttgata
     2041 cgacgccgcg tacaacgtct tcggatcaga catgtccatc acgaggtcgg tgaagccggt
     2101 gtcctcgtca atgaacttta cgttgttcca ggtcctgccg ccgtcggtcg ttttatagat
     2161 accccgctct ttgttcggcc cgaacaaatg accaagcacc gccacgtaaa ctgtgttcgc
     2221 gtccttcgga tcgatcacga tgcgggcgat ggattgcgaa tcttcgagac ccatcttcgc
     2281 gaacgtcttt ccgccgtccg acgacttgta gataccgtcg ccaaaactcg aactttgacg
     2341 gttattgggc tcgccggtgc ctacccaaac gatgtccgga tttgacggcg cgattgcgat
     2401 atctccaatg gatgccgagg aataagtgtc gaaaatgggc tgaaaagtcg tgttgttgtt
     2461 cgtcgtcttc cagacgccgc ccgtggcgaa cccgatgtag caaacgtagg aattcgtttc
     2521 gacgcaggcg atgtcgtcaa tgcggccgcc catgctggct ggtccgatag cgcgaaacac
     2581 aaatcggcgc aggagcggat cgttcgacca gttgatgggc gtcggcgttg gcgacgggat
     2641 tggcgttgcc gtagccgcgc gtgtaggcgc cggcgtttgg gttgccgagg gcgactgaga
     2701 tgccgccgga ttctgtgcgc ctacagccaa cgcgcccaac gtgacagcgg ttaacgcgaa
     2761 cccagcgatg gcgagcagca gaccacggag atcgcgagtc gaacgacacg tgtctttcat
     2821 agggaattcc tttccgtcag atgtgaaaga aaatgcagcc acaaagaact ggcggccaca
     2881 tcgaagagca agcgcttcag atcagcacaa cgtaatggcg ggcccttcgg ttacaacttc
     2941 ggcgaacagc aagcttcaag cggcaaacat ttatccgatc agcgacagat agtcaacgtt
     3001 gattcgatgt ggcacgcgca tcttgcgcat gagttcacgg cggaacgccc gtgccattaa
     3061 gaactgaaac ctgcacgccg ccgcgcagaa atccttgacg gtgagacata gcgagactag
     3121 aatcggctct actcacgaat taggtttcta atgctgcctc gaacgcaacg tcaaaaagaa
     3181 gttctggatt acatcactcg ctttttggcg aagcatgggc acgaaccttc gtacgcacag
     3241 atcgcgcgac acttcggtgt cagctccaaa gcaacgatcg ccaagcacat cgccgcactc
     3301 gaaaaacgcg gtctcgtcaa acgccaacac gaaccgggtc acttcaccct cgcggtgaga
     3361 tttgaggaag cggcggcgga cgcaacttgc gaggtgccgc tcgtcgggcg tatcgctgcg
     3421 ggcctaccca tcgatgcgat tcaggatgtt gagatgattt gcgttccgcg cttcctgctt
     3481 ggccgcgttc gtcccgaaag aatctacgcg ttgcgcgtca aaggcgattc aatgatcgat
     3541 gagcacatct gcgacggcga catcgctttg atcgaaagcc gtagcgaagc gcgcgacgga
     3601 gagattgttg ttgcgctaat cgatcaaacg cgcgcgacgt tgaagcgctt gttccgtcgc
     3661 gggcaggaag tcgaactgcg accttcaaac gcggccgtgg aaccgattcg cgtgcatgcc
     3721 tcacgggtcg aaatccaggg cattttccgc agcctcctcc gtcctagcgt ctaggccaaa
     3781 aacgtgaaaa ttccaaacaa cctgcctgtt ttcagcactt tcgcgtctgt ctctggaaaa
     3841 tgattctcac gctgctccat cacgaaggac taattcaggg cgcacagatc ctgcaagcgg
     3901 tggtggccct gggctggatg gcgctaggct gtggcgtaat caaattgtgg tggcgcaaaa
     3961 agtagttcgc gtgcttccta ccggcgacgc ttcctgaccg tctgctccgt atcgcgttcg
     4021 aattcaaact tacagtccct gggcttcttg tcttcgcgta acccgacgaa gaccggatga
     4081 cgcattcgct cgtcagccgt ccactcagaa aacttcactt ccgcgaccag cttcggcttc
     4141 acccactgca cgggctcgtt tgtcttgggt ttgaccgcga acggacactt atcagtcttg
     4201 agcggctgaa ggagtttatg aatctcgcgg agcttctgtt ccttgaatcc gccgcctaca
     4261 tgagccacat agtgaagttt actctcacga tatagtccca tcaccagcga accgaagtac
     4321 gaacgcgcgc cacgaggttg cgtgtagccg ccgatgacga cttccgatcg cttaactgtc
     4381 tttactttga gccagtccga cgtgcgcttc tgcgcgtact tacttgcggc gcgttttgca
     4441 atcatgcctt ccaggcgaaa ctttgcgatc tcgtgaaaga aagcttcgcc ttcgccttca
     4501 acgtggtcgg aatattttaa gaagctcgcc ggacgcagga tctgctcgag cctggctttc
     4561 cgctcaacga ccgggcaacc gatcaggtcg tagccatcga gatgcagcag gtcgaacgcg
     4621 aaatagacaa gctgcgcagt ccgcgcttta gcataactgc cactccggat gcggagcttg
     4681 ttctgaagca attgaaactg tggccggccg tcttcgtcga gcgcgactat ctcaccatcg
     4741 agaatcgctt cttttgcatc gatctgtttc ggtatgtttg ccagttcggg atactgcggg
     4801 gtcatctcga tctgattgcg cgaaacgaat cgcgcgcttc ccttgctcac gaagcagacg
     4861 gatcgaaacc catcccactt cgtttcgaaa atccaatccg gatcagagaa tggctcatcc
     4921 acaagcgtcg ccagcatcgg atgaatgatt tccggcatgc gtgc
//
LOCUS       DATDBY010000180         3297 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2082185, whole genome shotgun sequence.
ACCESSION   DATDBY010000180 DATDBY010000000
VERSION     DATDBY010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3297
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2082185"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..496
                     /locus_tag="VIT19_03400"
     CDS             <1..496
                     /locus_tag="VIT19_03400"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEY5838055.1"
                     /translation="FAKAVDLAARYDRKIMVEELVDAREIECAVMGNDLPEASLPGEY
                     VIHEQSARFLDYTEKYASTGNVEFIVPARISKAATKKIQSMAVKAYKAIDASGLSRVD
                     FFLKKDGELLVNEINTLPGLTDVSGFPKMWKASGVPFTKVIDKLIEFAIERHRERARN
                     ETSI"
     gene            537..1862
                     /locus_tag="VIT19_03405"
     CDS             537..1862
                     /locus_tag="VIT19_03405"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEY5838056.1"
                     /translation="MKHTRCRRISRSWWIVTAVVASFGFLVITPRSTGTQLGTFDRDS
                     AKAMLAMVKDDLKKNYYDPGFRGLDLEARFKQAEERIKQAQTRDQLVIPIAQFMLDLN
                     DSHTFFLPPFRAARVRYGWRMQMVGDACFVTDVNPKSDAAAKGLRAGDKVLTVDGTRP
                     TRENFWKINYRYYALIPSRSLKLSISRPDSESPLEIEALSKVERTAERADYFTNIWRY
                     NSETRLEDDRFYEQGDLLVWKMPAFDLSPDRIDEIMDRVRKHKVLVLDLRDNGGGYVE
                     TLERVAGYFFDRDLKVADLKGRKEMKPILAKTRSDKVYKGQLIVLVDSGSASAAELFA
                     RVVQLEKRGRVIGDRSAGAVMTSKSYDHETGVGGTLYFGASITIADVIMSDGKSLEHV
                     GAVPDELMLPSASDIAAQRDPVLARAAAIAGVQLTSDKAGKLFPIEWLK"
     gene            2002..2574
                     /locus_tag="VIT19_03410"
     CDS             2002..2574
                     /locus_tag="VIT19_03410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838057.1"
                     /translation="MNLLVKIVFSGALAMTMTVPSYGQTDKAISEAATQKAFFENLKK
                     MCGRRFAGETQFPPDPNHPMAGKKLVMSVESCSERELRIPFLVGEDKSRTWILTLSEK
                     GLLFKHDHRHPDGTPDKITMYGGWAAPGGTSHLQRFPADPDTAKLIPEATTNVWTLEI
                     LPEKQQFTYYLERNSQPRYRAVFNLRPLPE"
     gene            complement(2577..>3297)
                     /locus_tag="VIT19_03415"
     CDS             complement(2577..>3297)
                     /locus_tag="VIT19_03415"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5838058.1"
                     /translation="FQISEDGVEQKIAAFSAEETPFAAAILLDTSGSMESRLTLGRSA
                     AIRFLDGLREQDVASIYSFDSKVEQWGDFSPGRDLPARVYGLRTKTMTALNDAVVRAA
                     EDLAKREEKRRAIVVLSDGGENYSRASSDKALDRASLAAATIYAVNMSEQGPKRDFAA
                     AGTLKNLAEKSGGRYIDTPGGLQLRDSFALIAEELGRQYTISYRPTNRARDGKWRKVD
                     VKLAKPDVNARTRKGYRAPKG"
BASE COUNT          769 a          868 c          927 g          733 t
ORIGIN      
        1 ttttgcgaag gctgtcgacc ttgctgcccg gtacgatcga aagattatgg ttgaggagtt
       61 ggttgacgcg cgcgagattg agtgcgcagt gatgggtaac gacctgcctg aggccagttt
      121 gccgggtgag tacgtcattc acgaacagtc ggcgcgattt ctcgactaca cggaaaaata
      181 tgcgagcaca ggaaacgtgg agttcattgt tcccgcacgc atttcaaaag cagcgactaa
      241 gaagattcag tcgatggccg tgaaagccta caaagccatc gacgcctcgg gcctttcgcg
      301 cgtggacttc tttttgaaaa aggatggcga gttgctggtc aacgaaatca acacgctgcc
      361 cggcctcacg gacgtttcgg gatttcccaa aatgtggaaa gcgtcgggcg tgccgttcac
      421 caaagtgatc gataagctga tcgagttcgc gattgagcgt catcgcgagc gggctcgaaa
      481 cgaaaccagc atttgacggc atatcctgca aaacaatgca cgagacttct ctgagaatga
      541 agcacacccg atgcagacga atctcacggt cctggtggat tgtcactgcg gtcgtggctt
      601 cttttggatt tcttgtcatt acgccgcgct cgaccggcac tcaactcggg acttttgatc
      661 gggacagtgc caaggcgatg ctcgcaatgg tcaaggacga tcttaagaaa aactactatg
      721 accccggttt tcgcggtctc gatttagaag cgcgattcaa acaagcggag gagcggatta
      781 aacaggcgca gacgcgcgat cagctagtca ttccaatcgc ccagtttatg ctggacctga
      841 atgattcgca tacgtttttc ctcccgccat ttcgcgctgc ccgcgtgcgt tatggctggc
      901 gaatgcagat ggtcggagac gcttgtttcg ttactgacgt gaatccaaag agcgacgctg
      961 ccgctaaagg tttgagggcg ggagacaagg tgctgaccgt ggatggtacg cggccgactc
     1021 gtgagaactt ttggaagata aattatcgct actacgccct gattcccagt cgcagcttaa
     1081 agctatcgat cagtcgtccg gacagcgaat cgccgctcga aattgaggcg ctttctaagg
     1141 tggagaggac ggccgagcgg gcggactact ttaccaacat ctggcggtac aacagcgaaa
     1201 cacgtctcga agatgatcga ttctacgaac agggcgattt gctggtttgg aaaatgcccg
     1261 catttgatct ctcgcccgac cgtattgatg aaatcatgga ccgagtccga aagcacaagg
     1321 tgctggtttt ggatcttcgc gacaacggcg ggggctatgt agagacctta gagcgcgtcg
     1381 ccggttactt cttcgatcgc gatctaaaag tcgctgacct taagggccgg aaagagatga
     1441 aaccgatcct tgctaaaact cggagtgata aggtctacaa gggacaactt atagtgctgg
     1501 tcgacagcgg gtcggcctcg gcggcggaat tgttcgcccg cgtcgtgcag cttgaaaagc
     1561 gcggaagggt gatcggcgat cgatcagccg gcgccgtcat gacttcgaaa agttacgatc
     1621 atgaaaccgg agttggcggt acgctttatt tcggcgcaag tataactatt gcggacgtca
     1681 tcatgagtga cggcaagagt ctggaacacg taggggccgt tcccgatgaa ctgatgttac
     1741 cgagtgcgtc ggacatagcg gcccagcggg atcctgttct ggcgcgggcg gcggcaattg
     1801 caggggtaca acttacgtca gataaagcgg gcaagctttt tcctatcgaa tggctgaagt
     1861 gatggctgac gtagagaaat atcggcacaa agagcttctg ggaactttaa atacactgta
     1921 gtggagaacc ggttcgaatg aatgcgttcc ggtcacggct tcggcgcgcg ctgaccgtct
     1981 aaaccgagaa agaatcaagc aatgaaccta cttgtaaaga tagttttcag tggcgcatta
     2041 gccatgacca tgacggttcc gtcttacggt caaaccgata aggcaataag cgaagccgcc
     2101 acgcaaaagg ccttcttcga aaacctcaaa aagatgtgcg ggcgccggtt cgccggcgag
     2161 acccagtttc cacctgatcc caaccatcca atggcaggca aaaagctagt catgtcggtt
     2221 gagtcgtgta gcgagcggga acttcggatt ccatttctcg tcggtgagga caagtcgcgg
     2281 acgtggattc tgacactgtc ggaaaaaggt ttgctcttca agcacgatca ccgtcatccc
     2341 gacgggacgc ccgacaagat tacgatgtat ggtggctggg ccgccccggg tggtacttct
     2401 catctgcaac gttttcccgc cgaccctgat acggcaaaac tgattcctga ggcgacaacg
     2461 aatgtttgga cgctcgagat actccccgag aaacagcagt tcacctacta ccttgagcgg
     2521 aacagccaac cacgctatcg agcggtgttc aatctgaggc cgctacctga gtaagcttaa
     2581 cctttagggg cgcgataacc tttgcgtgtt cgcgcgttca cgtccggttt ggcgagtttc
     2641 acgtcaacct tccgccactt gccgtcgcgc gcccggttag ttggacggta tgaaatcgtg
     2701 tactggcgac cgagttcctc tgcgatgagg gcgaaggaat cacgcagttg caatccgccc
     2761 ggcgtatcga tgtaacgacc gccgcttttt tcagccaggt ttttgagagt gccggccgcc
     2821 gcaaagtcgc gcttcggacc ttgctcagac atgttaactg cataaattgt cgccgcagcg
     2881 agcgacgcgc gatccagagc tttgtctgag ctggcacggc tgtagttttc gcctccgtca
     2941 gacagcacca ctatcgcccg gcgtttttct tcacgtttcg ccaaatcctc agcggcgcga
     3001 accacggcgt cgttgagcgc cgtcatcgtc ttggtcctca agccataaac gcgcgccggc
     3061 aaatctcgac ctggagaaaa gtctccccac tgctcaacct tactatcaaa gctgtaaatg
     3121 gaagcgacat cctgttctct caaaccatcg aggaaccgga tggcagcgct gcgtcccagc
     3181 gtcagccgcg attccatgct ccccgaagtg tcgagcagaa tcgccgccgc aaagggagtc
     3241 tcttcagcgc tgaatgctgc gatcttttgc tccacgccat cttcactgat ttggaag
//
LOCUS       DATDBY010000181         2649 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1350957, whole genome shotgun sequence.
ACCESSION   DATDBY010000181 DATDBY010000000
VERSION     DATDBY010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2649
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1350957"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..758
                     /locus_tag="VIT19_03420"
     CDS             <1..758
                     /locus_tag="VIT19_03420"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HEY5838059.1"
                     /translation="ASIFGNKRTASIMMKFELQAKNFQNDEPKPKSRSVMEDSQNNQT
                     NALNGSDLIPAGRDASATAPSPVLLPKLLLGSSSPRRSQILEMIGWPFEVGAVEVDES
                     LRDDESPREYVARLADAKAQAAGAVHSHRPIVAADTTVVVDEHILAKPADSEDARRML
                     RLLQGRWHQVLTGVALISDSAREVDVEMTEVRFAPMSNAEIAWYVETGEPMDKAGAYA
                     IQGKGARFIEGIKGDYFNVMGLPVRLLYDLIRR"
     gene            complement(839..2257)
                     /locus_tag="VIT19_03425"
     CDS             complement(839..2257)
                     /locus_tag="VIT19_03425"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY5838060.1"
                     /translation="MQNSFHVPHTSIEQFTLENGLRVVLNQDKSIPVVSISVYYDVGS
                     RNEPEGRTGFAHLFEHMMFQGSENVPKAAHFQYISNAGGTMNGTTSSERTNYFETLPA
                     SELPLALWLESDRMRSLNVTQENLDNQREAVKEEKRLRYDNQPYVNGFLRLFEMSFKN
                     PANAHSTIGSMEDLDAATVDDVREFFRVYYAPNNAVLSIAGDFDRAEATDLIHKYFAT
                     IPRQPAPPPVDVSEPVEVAEHLDTYVDKLAPVPAFALGWKIPPRRTPAFYALSLASHL
                     LFEGESARLYQKLVKGEESVVQIQGGIDERRGPSGLFIVVIPKPDSEGAQIRDSIFKE
                     IKDLASRGPGKEEMEKLRNNLFNGAVRSRQSSQFRSQQIAEFTLYDGDPDLFNTELQS
                     YLDVTADQIRDAVASNLDTDNRVLLEIVPGAVEAAPAAPQPPGEPNQPTAPPAQVPSA
                     PAKEPPPTGPLAASGEQPAMKH"
     gene            complement(2436..>2649)
                     /locus_tag="VIT19_03430"
     CDS             complement(2436..>2649)
                     /locus_tag="VIT19_03430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838061.1"
                     /translation="SADASHKLGQLVQAGVFGTRAEAASFLIDQGIKTQTDLFERVEQ
                     KLAEIERLRAELRGMVAEKKTDETPE"
BASE COUNT          575 a          736 c          777 g          561 t
ORIGIN      
        1 ccgcgagtat cttcggcaat aaaagaactg catcaatcat gatgaaattt gaacttcagg
       61 ccaaaaactt ccagaatgac gagccaaaac ccaagtctcg gagtgtaatg gaagattcgc
      121 aaaacaacca aacgaacgcg ctcaacggtt ctgatttaat cccggcaggc cgggatgcat
      181 cagcgaccgc accttcaccg gttctattgc cgaagctgct gctgggttca tcaagtccgc
      241 gacgctcgca aatcctggaa atgattggct ggccatttga agtcggcgcg gtcgaagttg
      301 acgaatcact gcgcgacgac gagagcccgc gtgagtacgt ggcgcgtctc gcggacgcaa
      361 aggctcaagc cgcgggtgcc gttcattcgc atcgacccat agtcgccgct gacacgactg
      421 tcgtggttga tgaacacatt ctcgcaaagc ccgcggattc agaggacgcc aggcgaatgc
      481 tgcgactgtt acaaggccgc tggcatcagg tgcttaccgg ggtcgcgtta atctccgact
      541 cagcccggga ggttgacgtc gaaatgactg aagtacgatt cgcgccgatg agcaacgccg
      601 aaatcgcctg gtacgttgaa acgggcgagc cgatggacaa agccggcgca tacgcgattc
      661 aaggcaaagg cgcgcgcttc atcgaaggaa ttaaaggcga ctacttcaac gttatgggtt
      721 tgccggtgcg tttgttgtac gacttgattc gccgatgact ggaacgcaag cgtctcgctt
      781 gccgtcgccg tctggctttg aagatgcaag cgggacgctt gcgctccagt cagtcgcact
      841 aatgtttcat cgccggctgt tcgccggaag ctgcgagcgg acccgtaggc gggggttctt
      901 tcgccggcgc agacggcact tgtgcaggtg gcgcggtcgg ttggttcggt tcgcccggcg
      961 gttgcggcgc ggcaggcgca gcctcaacag caccaggcac gatctcgagc aacacacggt
     1021 tgtcggtatc caggttactc gccacggcgt ctcggatctg gtcagcggtc acgtccagat
     1081 aactttgcaa ctcagtattg aaaaggtccg ggtcaccgtc gtagagagtg aactcggcga
     1141 tctgttgtga acggaactgg gaagactgtc ggctgcgcac tgcgccgttg aaaagattgt
     1201 tccgcagctt ctccatctct tccttgccgg ggccgcggct ggccaggtct ttgatctctt
     1261 tgaagatgct gtcgcgaatt tgggcgcctt cactatccgg ttttggaatg accacgatga
     1321 acaggccaga cggcccacga cgttcgtcga tgccaccctg gatttgcacg actgactctt
     1381 cacccttcac gagcttctga taaagccgcg cgctctctcc ttcgaacagc agatgactgg
     1441 ccagcgatag cgcgtaaaaa gcgggcgtgc ggcgcggcgg aatcttccag ccgagcgcga
     1501 acgcgggcac cggggcgagc ttatcgacgt atgtgtcgag gtgttcagcg acttcgaccg
     1561 gttcgctgac atcaacggga ggcggcgcag gctgtcttgg aatcgtggcg aagtatttgt
     1621 gaatcagatc cgtcgcttcg gcgcgatcga agtcgcccgc gattgaaagc acggcattgt
     1681 taggcgcgta gtaaacccga aagaactcgc gcacatcatc aacggtcgcc gcatcgaggt
     1741 cttccatcga gccaatcgtc gagtgcgcgt tcgctgggtt cttaaaactc atctcaaaca
     1801 ggcgcagaaa accgttcacg taaggctgat tgtcgtaccg caaacgcttt tcttctttta
     1861 cagcttcgcg ctggttgtcg agattctcct gcgtcacgtt gagcgaacgc atgcgatcgc
     1921 tttccaacca cagcgccagg ggcaactcac tggccggcag ggtctcgaaa taattcgtgc
     1981 gttcgctgga cgtcgttccg ttcatcgtgc caccggcgtt ggagatgtat tgaaagtgcg
     2041 cggccttcgg cacattctca gagccctgaa acatcatgtg ctcaaacaag tgagcaaagc
     2101 cggtgcggcc ctcaggctcg ttgcgcgagc caacatcgta gtaaacgctg atagaaacta
     2161 ccggaatgga cttgtcctgg ttaaggacga cccgcagccc gttctccagc gtgaattgtt
     2221 cgattgaagt gtgtggaacg tgaaaggaat tttgcacgcg aagccgctca acaaaaatga
     2281 agtggaatga cgggggaagt gtaccgcgtc gcgtggggga ttaacaaaga cggcgcgtgt
     2341 cggaaccggg agcggtagcg accggatcaa gattcaacat caaacgagat gatccctcgc
     2401 taccgctcgg agttctgacc caaggcttgt ggacgttact caggcgtttc gtccgttttc
     2461 ttttcggcga ccatcccgcg tagctcagcg cgcagacgct caatttccgc gagcttctgt
     2521 tcgacgcgct cgaacaaatc ggtttgggtc ttgatgccct ggtcgatcaa aaacgaggcg
     2581 gcctcagccc gcgtgccgaa aacacctgct tgcaccagtt gacccaactt gtgcgaagcg
     2641 tccgcggaa
//
LOCUS       DATDBY010000182         5621 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_260974, whole genome shotgun sequence.
ACCESSION   DATDBY010000182 DATDBY010000000
VERSION     DATDBY010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5621
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260974"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3969
                     /locus_tag="VIT19_03435"
     CDS             <1..3969
                     /locus_tag="VIT19_03435"
                     /inference="COORDINATES: protein motif:HMM:NF019323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MG2 domain-containing protein"
                     /protein_id="HEY5838062.1"
                     /translation="RDRDNFVISDVDSFYFSGEGGDMDLLSSEDLTSYIYTDRPIYRP
                     AQKVYFKGILRQWGREGYKLLDAKTASVTIEDPNSGKIFEKELPLSTRGTFSGEVDIA
                     EEAPLGGYNITAKIGEATSSGYFEVQEYKKPEYKVTVKGPKEFAAIGEKVRFTVNANY
                     FFGAPVTNADVQYYVYKQRYYHWWWDADESDDFDDEAGPDNEGGDEEDYGYYGTDLVT
                     QGEGTLNSRGEMVVDFEVPAPGEKEDWDYSYRLEAQVTDASRREMSGAASFIGTRGKA
                     VADAFPERYLYYQGDAAKIRVKTATYSGQPVSEKVTLQFIEQKWEKIEKQEEYNGYKY
                     TTYDYKLHERQLGSADVNTDSQGNATYDFTVPSPGSVYVKAIIYENGKPIVNRGGSFW
                     APDKQGQWSDFQYRDYEENAIKLVPDKKSYRPGETAHVLAMLPKDNAHLLVTTELSEV
                     MTVRQIDSPGRSIVIDVPIEKRYAPNVYLNVSFVQDSDMFEQSQILSVPARDRMLKLD
                     IVPNKKEFKPRDVASYTIMARNEDGSPAANAEVSLGIVDEAIYSIASETAGNIKRDFY
                     GRRYNEVQTSLAVHYTFTGYAGDNPADLAKNKSAYQLADFKNESSFAEPTVRKEFKDT
                     AFWQPDVVTGGDGKATVEFKLPDNLTTWRATARAVTADTRVGSAVQKTIARKDVIMRL
                     EMPRFLTEGDTVTISGVVHNFLATEKSTKISLDLTGAQLLDASSQTVTIRQNGEHRVD
                     WRVQAHTVGKLTLLAKALTDKESDAVEMSMEVVPHGLKQTLGNSTTVMQKEADQTFNL
                     DLPGRADEQARTLRIEASPSIAGALFGALDYLTSYPYGCTEQTMSSFLPNVVVAQALK
                     DIPSAKIRATNDLDKKVQRGLDRLYAYQHGDGGWGWWKDDKSDPFMTAYVVDGLTMAS
                     RAGYQVDGWRHAQGRQKLQALLTAGKNDNGNPIDEETRAYMIYAYTGSGEGDARFLEE
                     LYGKRGSLGPYGRALLALALQERKDGRAAEVASLLEGSARQDAFEAYWQTARINDYGR
                     DIYLDAEATALSLKALAQINPGSPLLPKAAHWLVKNRRNGHYWLSTKETAFALYGLTD
                     YLKVSKELSPDYSFEVYLNGVKVAGQHVGPGEASNAQSIVITKKAGEVVGSNQIRIVK
                     KGRGALYVSSSLEYFTADENVAPQSANGLKITREYLRLRVTEEEGSQASWRVEPLSGE
                     LRSGDMIVVRLRLTGPRAQYLMIEDPIPAGAEQVARVSGINLNHSTGQWSDWYSNREF
                     RDNRTVIFMNYFDGDATLQYAMRVEVPGEFKIAPARAELMYQPTVQANTANDRLRILD
                     KK"
     gene            4005..4550
                     /locus_tag="VIT19_03440"
     CDS             4005..4550
                     /locus_tag="VIT19_03440"
                     /inference="COORDINATES: protein motif:HMM:NF024759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEY5838063.1"
                     /translation="MTTTETLRSHRDTETLCLRVDSVSLWWKAEERRLPPITKTIAEL
                     NQITREVIGAAIEVHSQLGPGLLESSYRECLCRELLLRAIPFEREKPLPLEYKGIHLG
                     CGYRLDLLVADSVVVEIKAIEALAPIHEAQLLTYLRIGGWRLGLLINFNVAVLKNGIR
                     RRILGYETEQATVPEEAHHDH"
     gene            4540..5376
                     /locus_tag="VIT19_03445"
     CDS             4540..5376
                     /locus_tag="VIT19_03445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838064.1"
                     /translation="MITNLKLWFESLRSTLTNLRAVGIFIALYALLLVSFYFFISTRE
                     ATVWQVLVTYALLLLLPAEFFVLQAAILEFARARKLVVKNILLSALKLAAVTIPVLII
                     GALMWWLMNKLQARFPAPPAPLVFPPAPPKAPPAHWPTLLITTLRFVLFGVALPLATI
                     HLWIEASVCDVRASFAGGARNIFGTIGRTLARAFSSESVFVYGLGLILFVLGPYLILQ
                     PRLTFTGTKTAFTLFVVQVIVALVLMLIGWVLTLVTLARAHASEEVIEVKAPATVAES
                     PA"
     gene            5376..>5621
                     /locus_tag="VIT19_03450"
     CDS             5376..>5621
                     /locus_tag="VIT19_03450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838065.1"
                     /translation="MVQAINLLARLRRQHALLLTCSCALLLLINFSASTPFLPAFNWP
                     HNPNSNEDEIDSALQQSAEDALGNRQGSIIVMDAQTGR"
BASE COUNT         1257 a         1546 c         1682 g         1136 t
ORIGIN      
        1 cgtgaccgcg acaactttgt catctcggac gtcgactctt tctatttcag cggcgaaggc
       61 ggcgacatgg acctgctttc gagcgaggac ctgacgagct acatctacac cgaccggccc
      121 atctatcgtc cggcgcagaa ggtttacttc aaaggcatcc tgcgtcagtg gggacgcgaa
      181 ggttacaagt tgctcgacgc gaaaactgcg agtgtcacga tagaagatcc gaacagcgga
      241 aagattttcg agaaggaatt gccgttgtcc acgcgcggca cgttcagcgg cgaagttgat
      301 atcgccgagg aagcgccgct gggcggctac aacatcacgg cgaagattgg tgaagcaacg
      361 tcgagcggct acttcgaagt ccaggaatac aagaagcccg agtacaaagt gacggttaaa
      421 gggccgaaag agtttgcggc gattggcgag aaggttcgct tcacggtcaa cgcgaattac
      481 ttcttcggcg cgcccgtgac gaacgccgac gtgcagtact acgtctataa acaacgctat
      541 taccactggt ggtgggacgc cgatgagagc gatgacttcg acgacgaagc cggacccgac
      601 aacgaaggcg gcgacgaaga agactatggc tattacggca cggacctggt gacccagggc
      661 gaaggcaccc tgaactcgcg cggcgaaatg gtcgtcgatt tcgaagtgcc cgcaccgggc
      721 gagaaagaag attgggatta ttcgtatcgc ctggaggcgc aggtcaccga cgcgtcgcgg
      781 cgcgagatgt caggcgctgc ttcgttcatc ggcacgcgcg gcaaggccgt cgcggacgct
      841 tttccggaac gctatctcta ttaccagggc gacgccgcga agattcgcgt gaagaccgcg
      901 acctattcgg gccaacctgt ctcggaaaaa gtgacgcttc agttcatcga acagaagtgg
      961 gagaagatcg agaagcagga agaatacaac ggctacaagt acacgaccta cgattacaag
     1021 ctgcatgaac gtcaactggg gtcggcggac gtaaataccg acagccaggg caacgcgaca
     1081 tacgacttca cggtgccttc gcccggcagc gtctacgtca aagcgattat ttacgaaaac
     1141 ggaaagccga ttgtgaatcg cggcggatcg ttctgggcgc ccgacaagca ggggcagtgg
     1201 tccgattttc agtatcgcga ctacgaagag aacgcgatca agcttgtgcc cgacaagaaa
     1261 tcctatcgtc cgggcgagac ggcgcacgtg ctggcaatgc tgccaaagga caacgcgcac
     1321 ctgctcgtga cgactgaact gtcggaagtc atgaccgtcc ggcaaatcga ttcacccggt
     1381 cgcagcatcg tgatcgacgt gccgatcgaa aagcgttatg cgccgaatgt ttatctcaac
     1441 gtttcgttcg tgcaggacag cgacatgttc gagcaaagcc aaatcctgtc cgtgcccgcg
     1501 cgcgatcgga tgctgaagct cgacatcgtg ccgaacaaga aagagttcaa gccgcgcgac
     1561 gttgcgtcct acacgatcat ggcgcggaac gaagacggct cgcccgcggc gaatgccgaa
     1621 gttagtctcg gtatcgtcga tgaagcgatc tacagcattg cgtccgaaac cgccggcaat
     1681 atcaaacgcg acttctacgg gcgtcgctac aacgaagtgc agacgagcct cgccgttcat
     1741 tacacgttca cgggttatgc gggagacaac ccggcggatt tagcgaagaa caaatcggct
     1801 tatcaactcg cggatttcaa aaacgagagt tcgtttgccg agccgaccgt gcgaaaggaa
     1861 tttaaggaca ccgcgttctg gcaacctgac gtggttacgg gcggcgacgg caaagcgacc
     1921 gtcgaattca aactgccgga caatttgaca acgtggcgcg cgacagcgcg tgccgtcacg
     1981 gcagacacgc gcgtcggttc agcggtgcag aaaacgatcg cgcgcaagga cgtgattatg
     2041 cggcttgaga tgccgcgctt cctgacggaa ggcgacacgg tcacgatttc cggcgtcgtg
     2101 cacaacttcc tggcgaccga aaagtccacg aagatttcgc tggacctgac cggcgcacag
     2161 ttactggatg cgtcttcaca gacggtcacg attcggcaga atggcgaaca tcgtgtcgat
     2221 tggcgggtgc aggcgcacac ggtgggcaaa ctgacgctgc tggcgaaggc tttgacggat
     2281 aaagaatccg acgcggtcga aatgtcgatg gaagttgtgc cgcacggatt gaagcagacg
     2341 ctcggcaact cgacgacggt gatgcagaag gaggccgatc aaacttttaa tctcgatctg
     2401 cctgggcgtg ctgatgagca ggcgcgcacg ctgcgcatcg aagcatcgcc gtcgattgcc
     2461 ggcgcgctgt tcggcgcgct ggattacctt acgagttatc cgtacggctg caccgagcag
     2521 acgatgtcga gtttcctgcc gaacgtcgtc gtcgcgcagg ctttaaagga catcccgtcg
     2581 gcgaagattc gcgcgacgaa cgatttggat aagaaagttc agcgcggact cgatcgcctg
     2641 tacgcatatc agcacggcga cggcggctgg ggttggtgga aagacgacaa gtctgatcca
     2701 ttcatgacgg cgtacgtcgt ggatggtctg acgatggcca gccgcgcggg ttatcaggtt
     2761 gacggatggc ggcacgcgca gggccggcag aaacttcagg cgctgctgac ggccggcaag
     2821 aacgacaacg gcaatccgat cgacgaggag acgcgggctt acatgattta cgcctacacc
     2881 ggaagcggcg aaggcgacgc gcgtttcctc gaagagcttt acggcaaacg tggcagtctt
     2941 gggccgtacg gtcgcgcttt actggcgctg gctttgcagg agcgcaaaga cggccgcgcg
     3001 gcggaagtcg caagcctgct cgaaggctca gcgcgccagg atgcgttcga agcttattgg
     3061 cagacggcgc gcatcaacga ctatggccgc gacatttatc tcgacgcgga agcgacggcg
     3121 ttgtcgttga aagcgctggc gcagatcaat ccgggctcgc cgctgctacc gaaagctgcg
     3181 cattggctgg tgaagaaccg gcgcaacggt cactactggc tatcgactaa ggaaacggca
     3241 ttcgcgcttt acgggctgac ggattacctg aaggtcagta aagagctgtc gccggattat
     3301 tcgttcgaag tttatttgaa cggcgtgaag gtcgccggtc aacacgtcgg ccccggcgaa
     3361 gcttcgaatg ctcagtcgat tgtcatcacg aaaaaggccg gtgaagttgt cggctcgaac
     3421 cagattcgca tcgtgaagaa agggcgcggc gctttgtatg tttcttcgtc gcttgaatac
     3481 ttcaccgcgg atgaaaacgt ggcgccgcaa tcggctaacg gcttgaagat cacccgcgag
     3541 tatctgcgtt tgcgtgtcac tgaagaagag ggcagtcagg caagttggcg cgtcgagccc
     3601 ctctcgggcg agctgcgttc cggtgacatg attgtggtgc ggctacggct taccgggcca
     3661 cgcgcgcagt acctgatgat cgaagatccg attccggcgg gcgcagaaca ggttgcgcgc
     3721 gtcagcggca ttaacctgaa ccactccacc ggccagtgga gcgactggta cagcaaccgt
     3781 gagttccgcg acaaccgcac ggtaattttc atgaactact tcgacggcga cgcgacgttg
     3841 caatacgcga tgcgtgtcga agtgcccggc gaattcaaga tcgcgccggc acgcgccgaa
     3901 ctgatgtacc agccgactgt gcaggcgaat acggcgaacg atcggttgcg gattttggac
     3961 aagaagtagc tcagttcttc tcaagcgatc ttttcttcat gcaaatgacc accacagaga
     4021 cactgagatc gcacagagac acagagactc tgtgtctccg tgtagactct gtgtctctgt
     4081 ggtggaaagc agaggaaagg agactccctc caataaccaa gacgatcgcc gaactaaatc
     4141 agatcacgcg agaagtaatc ggcgcggcaa tcgaagtgca tagtcaatta ggccctgggt
     4201 tgctcgaatc gtcttatcga gaatgtcttt gtcgcgaatt gctgctgagg gccatcccgt
     4261 ttgaacgcga aaagcctctg ccgctcgaat acaaaggcat ccaccttggc tgcggctatc
     4321 gtttggatct cttggtcgcc gattcagtcg ttgtcgagat aaaggctatc gaagcgttgg
     4381 ctccaattca cgaggcacag ttgctcacct accttcgaat aggcggatgg cgccttggtt
     4441 tgctgattaa cttcaacgtt gcagtcctga aaaacggaat ccgaagaagg attctaggct
     4501 acgaaacaga acaggcgacc gtgcctgagg aagctcatca tgatcactaa tttgaaactt
     4561 tggttcgaga gcctacggag cacgctcacg aatttgcgcg cggtcgggat attcatcgct
     4621 ctctacgcgc tgctgctcgt cagcttctac ttttttatct cgacgcgcga ggcgaccgtc
     4681 tggcaggtgc tggtgactta cgctttgcta ctgctcctgc cggcggagtt ttttgtgctt
     4741 caagcagcga ttctcgagtt cgcgcgggcg cgaaagctcg tcgtgaagaa cattctttta
     4801 agcgcgctca aattggcagc cgtcacgatt ccggtcctca tcatcggcgc cttgatgtgg
     4861 tggctgatga acaaactgca agcgcgcttc cctgctccgc ccgcgccgct tgtttttccg
     4921 ccggcaccac caaaggcgcc gccggctcat tggccgacgc tgctgattac aacgcttcgc
     4981 ttcgttctgt tcggcgtcgc gcttccgctg gcgacgattc acctatggat tgaagcatcc
     5041 gtgtgtgatg tgcgcgcttc tttcgccggc ggcgcccgga acatctttgg caccatcggc
     5101 cgaacgctgg ctcgcgcatt cagctcggaa tcagttttcg tttacgggct cggactgatt
     5161 ctattcgtcc tgggtcctta cttgattctt cagccgcgtc tcaccttcac gggcacgaag
     5221 acagccttca cgctttttgt cgtgcaggtg atcgtcgctt tggtgttgat gctgattggc
     5281 tgggtgttga ccctcgtgac gctcgcgcgc gcgcacgcca gcgaagaggt cattgaggtt
     5341 aaggcgccgg ccacggtcgc tgagtcaccc gcctaatggt ccaggcaatc aatctgttag
     5401 cgcggctgag gcgccaacat gcactgctgt taacgtgctc gtgcgcgctc ctgctgctga
     5461 tcaatttctc ggcgtcgacg ccgtttctgc cggcgttcaa ctggcctcac aacccaaact
     5521 caaacgaaga cgaaatcgat tcggcgcttc agcaatctgc cgaagacgca ttgggaaatc
     5581 gccagggttc gatcatcgtg atggacgcgc aaaccggacg c
//
LOCUS       DATDBY010000183         2661 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2484790, whole genome shotgun sequence.
ACCESSION   DATDBY010000183 DATDBY010000000
VERSION     DATDBY010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2661
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2484790"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2661)
                     /locus_tag="VIT19_03455"
     CDS             complement(<1..>2661)
                     /locus_tag="VIT19_03455"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY5838066.1"
                     /translation="TPPVVSKFDNDSTPVLTIALSADRSIRELTELGDKIARPQLERV
                     GGVGEVRVVGGLQRAINLWVDAERLEAYQIPITQVRQALQRQNADVPGGNVNTGKEEL
                     VLRTLGRFTDPRQFEELVIANINGSPIRVRDIGRVEDGTKEQRSLARLNGVPTVTLDI
                     RRQSGANTIQVINGIKAELPRLTGQLPSDVKLEVIRDQSRYIESALHEIQTHLVLGGI
                     LASLVVLLFMRSWRSTIIAAVAIPASLISTFAMMRALDFTLNSVTMLALVLMVGVVID
                     DAIVVLENIFRFIEEKRMPPREAAKEATKDIGLAVLATTLSLVVIFLPVSFMSSISGR
                     FLYQFGITAAVAIMVSLLVSFTLTPVMSSRLIRVKDTGGHGQASSRKGFYRWIDRGYT
                     WMLSFAMRHRIAVSVVSILVILSVVPLYRSVKQEFIPSNVDEAEFEVNINGPEGTNMQ
                     VMNAAMLEIEKQIMATHGVRLVLSSAGGSFIGGLNSGGAYVRIAPHEERTLSLTRIWT
                     ELKKGKPWQAFRGNYTQQDVMQEVRRRLQKFAPMRAGVRNSNSFNFGAGGRFDIDFVL
                     RGPEIEKLSEYAEELGTRASKLGGIVDIDTSLKLNKPELRVKIDRQRAADLGVDTSDI
                     STNLRLMVGGEDQASRYRDESLNEDYDVQIRLSARDRSDQETIGRLYVPSSRGGLVRL
                     DNLVNITREISPSRIDHLDRERQVSLRASVAPGYALADRIEALRGAVSQMGLPVAYTT
                     TVAGRARELERTFVEFVWAFILSVIFMYMILASQFESTVHPITILLSLPLSMPFGLLS
                     LWLTNDTLNLYSALGLLVLFGVVKKNSILQIDHMNKLREMGMERAQAIMQGNRDRLRP
                     ILMTTLALVAGMLPLALGTGPGAEERRSIAV"
BASE COUNT          583 a          812 c          742 g          524 t
ORIGIN      
        1 accgcgatcg atcggcgttc ttcagcccca ggcccggtcc cgagcgccaa cggcaacatg
       61 cccgcgacca gcgcaagcgt cgtcatcaga atcggtcgta gacgatcacg attgccctgc
      121 atgatggcct gcgcacgttc catacccatc tcgcgcagct tattcatgtg atcgatctgt
      181 agaatcgaat tcttcttgac caccccgaac agcaccagca gacccagcgc ggaataaaga
      241 ttcaaggtgt cgttggtcag ccacagtgac aacaatccga aaggcatcga caacggcaag
      301 ctgagcagaa tcgttatcgg gtgaaccgtg ctctcgaact gcgacgccag aatcatgtac
      361 atgaaaatga ccgagaggat gaatgcccag acgaactcga cgaacgttct ttccagttcg
      421 cgcgcgcgac cagcgaccgt cgtggtgtag gcgacgggca gacccatttg gctaaccgcg
      481 ccgcgtagcg cttcgatgcg atcggcgagc gcgtaaccag gcgccaccga agcacgcagt
      541 gaaacctgcc gttcacgatc gaggtgatca atgcgtgacg ggcttatctc gcgcgtgatg
      601 ttcaccagat tgtccagcct taccaggccg ccgcgcgacg aaggcacata cagacgccca
      661 atcgtttcct ggtcggaacg atcgcgtgcg ctcaaacgaa tctgcacgtc gtaatcttcg
      721 ttcagcgact cgtcgcggta acgcgaagcc tgatcctcgc cgccgaccat caagcgaaga
      781 ttcgttgaga tgtcggacgt atcaacgccc agatccgcgg cgcgctgccg gtcgatcttg
      841 acgcgcagtt ccggcttgtt caatttcaaa gacgtatcga tatcgacgat accgccaagt
      901 ttcgaagcgc gcgtgcctaa ctcttccgcg tattcagaca gcttctcgat ctccggtccc
      961 cgcaggacga aatcaatgtc gaaccggccg cctgcgccaa agttaaatga gttcgagttg
     1021 cggacgcccg cccgcatcgg tgcgaatttt tgcaggcggc gacgcacttc ctgcattacg
     1081 tcctgctgcg tgtagttgcc gcggaacgct tgccagggtt tccctttctt tagttccgtc
     1141 cagatgcggg tcaaggacag agtccgctct tcatgtggcg caatgcgcac gtaagcgccg
     1201 ccggaattca gtccgccgat gaaagatccg cccgcgctcg acagcaccag acgcacgccg
     1261 tgggtcgcca tgatctgctt ctcgatttcc agcatcgcgg cgttcatcac ctgcatattg
     1321 gtgccttcgg gcccgttgat gttgacttcg aactcggcct cgtcaacgtt gctcggaatg
     1381 aactcctgct tcactgagcg atagagtggt acgacggaaa gaatcacaag tatcgagact
     1441 accgacaccg cgatacgatg gcgcatcgca aagctcaaca tccacgtata gcccctgtcg
     1501 atccaacgat agaagccttt acgcgatgac gcctggccgt gaccgcccgt gtctttcacg
     1561 cggatcagac gcgaactcat taccggtgtc agcgtgaaag agaccaacag gctgaccatg
     1621 atcgcgaccg ccgcggtgat gccgaactgg taaagaaagc gacccgagat cgaagacatg
     1681 aacgacaccg gcagaaagat cacgacgagc gaaagtgtcg tcgccagaac cgccagcccg
     1741 atgtcctttg tggcttcttt tgccgcttca cgcggcggca tgcgtttctc ttcaatgaat
     1801 cgaaagatgt tttccagcac gacgatcgcg tcgtcgatca cgacgcccac catcagcacc
     1861 agggccagca tcgtcacgct gttcagggtg aagtccaacg cgcgcatcat tgcgaacgtc
     1921 gaaatcagcg acgccggaat cgcgaccgcg gcaataattg tcgagcgcca cgagcgcatg
     1981 aaaagaagca cgaccaggct ggcgagaatg ccgccgagga ccaggtgcgt ctgaatctcg
     2041 tgcaaagccg actcgatgta gcgtgactga tcgcgaataa cttcaagctt gacgtccgac
     2101 ggaagctgtc cggtcaggcg cggcaattcc gccttaattc cgttgataac ctggatagtg
     2161 ttcgcgcccg attgacgacg aatatccagc gtcacggtcg gcaccccgtt gagccgtgcc
     2221 agtgaccgct gctctttggt gccgtcttcg acgcgcccaa tgtcgcgcac gcgaatcggc
     2281 gagccgttaa tattggcgat gactaactct tcaaattggc gcggatcggt gaaacgaccg
     2341 agcgtacgca gcactaactc ttcttttccg gtgttgacgt tgccgcccgg cacgtcggcg
     2401 ttttgtcgct gcagcgcctg ccgaacctgg gtgatgggaa tttgataagc ctcaagccgt
     2461 tcggcatcga cccaaagatt gatggcgcgc tgaagcccgc ccaccacccg aacttcgccg
     2521 acgccgccga cgcgctcaag ctggggccgg gcgattttgt cgccgagttc ggtcagctcg
     2581 cgaatcgaac gatccgccga gagagcgatg gtcaaaaccg gcgtgctgtc gttgtcgaat
     2641 ttcgagacga cgggcggggt g
//
LOCUS       DATDBY010000184         2473 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1457471, whole genome shotgun sequence.
ACCESSION   DATDBY010000184 DATDBY010000000
VERSION     DATDBY010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1457471"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..851)
                     /locus_tag="VIT19_03460"
     CDS             complement(<1..851)
                     /locus_tag="VIT19_03460"
                     /inference="COORDINATES: protein motif:HMM:NF014615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEY5838067.1"
                     /translation="MEPFRTLLDRDDSIHVFDGAMGTMLYSKGIYINRSYDELNLAAP
                     DLVREVHAEYIRAGADIIETNTFGANVNKLQPYGLEGNAREINITAARLAREAAGNRV
                     YVAGAIGPLGLRIEPYGPTSFDEAKTMFAEQISALLEGGVDLFVLETFSDISELHQAI
                     RAVRELCDLPIVAQVTIQLDGNTVFGTTADVFTSRIDQWGADVIGLNCGVGPAIVLNA
                     IEKMRTFTTRKLSAQPNAGLPRDVGGRQIYMCSPEYMAEYSRRIAQSGAKFIGGCCGT
                     TPAHIKL"
     regulatory      complement(1046..1121)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            complement(1322..2002)
                     /locus_tag="VIT19_03465"
     CDS             complement(1322..2002)
                     /locus_tag="VIT19_03465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838068.1"
                     /translation="MPSRAATRQELPVEEKESASSGGANAVHRGAMMKRNFFAVLAAL
                     CLTVAGAVVPPRVVAQQKTQDIVFGPVSTYNHKSGWFSLARPGNWNVTDVSDAGEVVV
                     SIIDPTENGVVVVRVYRPSRGYTQAELGETLRAFLRERLGKFDGFTMGDSRSQKDGSM
                     GLYFRYNSMVEGVSYKMYGDAFIEQHNGLVGLITLIMPQDQYDAKQKDAYAMVNSFRV
                     TGTGVNKG"
     gene            2187..>2473
                     /locus_tag="VIT19_03470"
     CDS             2187..>2473
                     /locus_tag="VIT19_03470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838069.1"
                     /translation="MATNNQVGVTTHPKGLYVLFATEMWERFSFYSMLALFTLYLRHS
                     TEGFGWTAADATSLYSNYLMFVYASPLIGGLIADKLTGYRKAVMIGGFFFMA"
BASE COUNT          524 a          708 c          656 g          585 t
ORIGIN      
        1 atcaacttga tgtgcgccgg ggtcgtgccg cagcagccgc cgataaactt tgcgcccgac
       61 tgcgcaatgc gccgtgagta ctcagccatg tactctggcg agcacatgta aatctgccgg
      121 ccgccaacgt ctcgcggcag acccgcgttc ggttgcgcgg acagtttgcg ggtcgtgaat
      181 gtccgcatct tttctatggc gttcaaaacg atcgccggac caacgccgca gttcaaaccg
      241 attacgtccg cgccccattg atcgattcgc gaagtgaaaa cgtcagcggt ggttccgaag
      301 accgtattgc cgtccagttg aatcgtgacc tgcgcgacta tgggcagatc gcacaactcc
      361 cggaccgcgc gaatcgcctg gtgcaactct gaaatatccg aaaacgtctc cagcacaaac
      421 agatccacgc cgccttcgag cagcgccgaa atctgttccg cgaacatcgt cttcgcttcg
      481 tcgaaagaag ttgggccgta gggctcaatg cgtaagccga gcgggccgat tgcgccggcg
      541 acgtatacgc gattgccggc ggcctcccgg gccaggcgtg cggccgtgat gttgatttcg
      601 cgggcgttgc cttccaggcc gtaaggctga agtttgttga cgttcgcgcc gaacgtgttc
      661 gtctcaatga tatcggcgcc ggcacgaatg tattcggcgt gtacctcgcg gacgaggtcg
      721 ggtgcggcaa gattcagttc gtcgtacgag cgattgatgt agatgccctt ggaatagagc
      781 atcgttccca tcgcgccgtc gaagacgtgg atgctatcgt cgcgatcaag aagcgttctg
      841 aagggttcca tgttgattct taagtgcttt gtactttgaa ctttgtgctt tgtcgtcttg
      901 ctaaggtcgt gtggcgagtt ccacgctgcc cgcgaggaac atcaaagtac aaagcaccaa
      961 gtacaaagca cttctcaaaa acaaaaaatc ccgcgctaaa caacgcggga cttcaaagtc
     1021 gtctgaagtt ctttcgggtc cggtttttcg aacttgcccg tgctgtttag ccgtttgttt
     1081 tgcgtggccg caagtcgcct taactcacca cgttttcatc agccgttata cgcttcaacg
     1141 gtaaagcctg tcaaccgcaa gccttaaccg ggtggtgtcc tagttttgcg atcttctctg
     1201 tgtctccgtg taacctccgt gcctctgtgg tgaaaatatc cggcaaaact caccacagag
     1261 acacagagcc ttttcacaga gacaccgagc aaaggcgaaa tagggcacta cgccttaacc
     1321 actaaccctt gttcacccct gtcccggtga cccgaaagct gttcaccatc gcgtaagcat
     1381 ccttctgttt cgcatcatat tgatcttgcg gcatgatgag cgtgatcaaa ccaactaagc
     1441 cgttgtgctg ctcgatgaac gcgtcgccgt acattttgta gctgacgccc tccaccatcg
     1501 agttgtatct gaaataaagt cccatgctgc cgtccttttg cgaccgtgaa tcccccatgg
     1561 tgaagccgtc aaacttaccc agacgttcgc ggagaaaagc cctgagcgtt tcaccgagct
     1621 cagcttgagt gtagccgcgg ctgggtcggt agacgcgcac cacgacgacg ccgttctcag
     1681 tcggatctat gatcgagaca actacctcgc ccgcatcgct gacgtcggtc acattccaat
     1741 ttccgggccg cgcgagcgag aaccaaccgc tcttgtgatt gtaagtactg accggaccga
     1801 agacgatatc ctgtgtcttt tgctgagcga cgacgcgcgg cggcacaaca gccccggcga
     1861 cggtcaggca aagtgccgct agaactgcaa agaagtttct cttcatcatc gctcctctat
     1921 ggaccgcgtt cgcgccgcct gaggacgccg attctttttc ttcaaccggc agctcctggc
     1981 gcgtggcggc gcgcgatggc atcgtatcgt gacaatcaga gatcgtccac aacttaattg
     2041 tgagaattcc cggtgctcta agccaatgct tcgggcgttt tcaggttgac agccctaggt
     2101 agcttctggc tgaatgccct taaataattg caaccatctc tctccgttag ttcgtcgaac
     2161 gactgaagag gagcgaatac gacaatatgg ccaccaacaa tcaggtcggc gttacgactc
     2221 atccgaaggg actgtacgta ctgtttgcca ccgagatgtg ggagcggttc agcttctact
     2281 cgatgctggc gctctttacg ctttatcttc gtcactcaac tgagggattc gggtggaccg
     2341 cggctgacgc aacgtcctta tattcgaatt acctgatgtt tgtttacgcg agcccgctga
     2401 tcggcggact gatcgccgat aagctgaccg gttatcgcaa ggccgtcatg attggcggat
     2461 tcttcttcat ggc
//
LOCUS       DATDBY010000185         3116 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_956804, whole genome shotgun sequence.
ACCESSION   DATDBY010000185 DATDBY010000000
VERSION     DATDBY010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3116
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_956804"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2709
                     /locus_tag="VIT19_03475"
     CDS             <1..2709
                     /locus_tag="VIT19_03475"
                     /inference="COORDINATES: protein motif:HMM:NF028476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein ndvB"
                     /protein_id="HEY5838070.1"
                     /translation="PQEERILLHAVARVVIVSERGSLEDQLVRRPAEGPLPAEFQPYA
                     PSQTYSETPLEIPKLSFFNGVGGFAHGGREYVAILGEGQWTPAPWSNVIANNADVGFL
                     VTETGGGFTWANNSHENRLTPWSNDVVSDSPGEVIYLRDEDSGATWTPTPLPIRENTP
                     YSIRHGQGYTVFEHASHGISQELLMFAPLDAPVKISLLRLRNRTERKRRLSATNYVDL
                     ILGVDRHASAPHIVTDIEEQQGAVFARNSFNNEFAERIAFVSTSETRCTMTCDRKEFI
                     GRNGSLAHPAALRRVGLSGRDGAGLDPCAAIQAQIELAPGEAREIVFLLGQADSIEQA
                     REINSRFRNVNAVNEALERVLNFWDQTLSTVEIKTPDASLDTLVNRWLLCQVLACRVR
                     GRSAFYQSSGAFGFRDQLQDVMTLVYARPEVAREQILRAASRQFKEGDVLHWWHEPSA
                     RGVRTRFSDDLLWLPYVVAHYVNITGDRSVLSESVPFLEAELLKPDQHEAYIEPQISS
                     ESGTILEHCTRAIDRSLGLGSHGLPLMGSGDWNDGMNRIGIGGKGESVWLGWFLATVL
                     QGIEPLLSEPGADRGPDAGSPQGVAVGTESNTQATDRRTAYAVHLEKLRKGLEKSWDG
                     DWYRRAYFDDGTPLGSAQNDECRIDSIAQTWAVISGVAESYRAQRAMAAVEQYLIRRG
                     DGLIILFTPPFDKSKLDPGYVKGYVPGVRENGGQYTHAALWTVIAFALLGEGDRAGEL
                     FGLLNPINHSSTRAGLHKYKVEPYVAPGDVYAVPPHTGRGGWTWYTGSAGWMYRAALE
                     YILGFKLQGDRLRVDPCIPRFWREFEITYRRGNTTYRIKVENPHSLNRGVASVELDGV
                     EQASKEIALSDDGQSHEVRVLMGERIENESTEAPSREQRVDQIYQS"
BASE COUNT          658 a          898 c          943 g          617 t
ORIGIN      
        1 ccgcaggaag aacgcattct gctgcacgcg gtggcgcggg tggtgatcgt cagcgaaaga
       61 ggatcgcttg aagatcaact tgtaagacgg ccggccgaag gcccactgcc ggcggagttt
      121 caaccatatg cgccgtcgca aacttattcc gagacgcccc tcgaaattcc aaagctgtcc
      181 ttctttaacg gcgtcggcgg cttcgcgcac ggcgggcgcg aatacgtggc catcctcggc
      241 gaaggccaat ggacaccggc gccgtggagc aatgtgatcg caaacaatgc cgatgtcggt
      301 ttcctggtga ccgaaaccgg cggcggattc acctgggcca acaacagtca cgagaatcgc
      361 ctgacgccct ggtcgaacga cgtcgtgagc gactcgcccg gcgaggtcat ttacctgcgc
      421 gacgaagatt caggggcgac ctggacgccg acgcctttgc cgatccgcga gaatactccg
      481 tactcaattc gccacggaca gggctacacc gttttcgagc acgcgagtca cggtatctcg
      541 caggagttgc tcatgtttgc gccgctggat gcgccggtga agatttcgct gctgcgtctg
      601 cgcaatcgca ccgaacgaaa acggcgattg tcggcgacga attatgtcga tctaatactg
      661 ggcgttgatc gtcatgcgtc cgcgccgcac atcgtgactg acatcgaaga gcaacagggt
      721 gcagtcttcg ccagaaattc attcaacaac gaatttgccg aacgcatcgc cttcgtcagc
      781 acgagcgaga cccgctgcac catgacctgc gatcgcaaag agttcatcgg ccgtaatggg
      841 tcactcgccc atcccgcggc tttacggcgc gtgggactga gtggccgaga cggcgcgggt
      901 ctcgatccgt gtgcggcgat ccaggcgcag atcgagttgg cgcccggcga ggctcgcgag
      961 attgtgtttc tgcttggaca ggccgactca atcgagcaag cgcgggagat caattcccgg
     1021 tttcgtaacg taaacgccgt caatgaagct ttggaacgcg tgctgaactt ctgggaccag
     1081 acgctctcca ccgtggagat caaaactccc gatgcttcgc tcgatacgct cgtcaaccgc
     1141 tggctcttgt gtcaggtgct ggcgtgtcgc gtgcgtggac gctcggcgtt ttatcaatcc
     1201 agcggcgctt tcggttttcg cgatcaattg caggatgtca tgacgttggt ttacgcgcga
     1261 cccgaagtcg cgcgcgaaca gatcctgcgc gcggcttcac ggcaatttaa agaaggtgac
     1321 gtgctgcact ggtggcacga accaagcgct cgcggcgtgc gcacgcgctt ttcagatgac
     1381 ctgctttggc tgccgtacgt cgtcgcgcat tacgtaaata tcaccggcga tcgatccgtg
     1441 ctcagcgagt ccgtgccgtt tttggaggcg gagttgttga agcctgatca gcatgaggcg
     1501 tacatcgaac cgcagatttc ttccgaaagc ggaaccatcc tggaacattg cacgcgcgcg
     1561 atcgaccgca gcctcgggtt aggttcgcat gggttgccat tgatgggctc aggagattgg
     1621 aacgatggca tgaaccgcat cggcatcggt ggcaaaggcg agagtgtctg gctcggatgg
     1681 tttttggcta cggtgctgca gggtattgaa ccgctcttgt cagaacccgg ggcggaccgg
     1741 ggtcccgacg cgggcagccc gcaaggggtg gcggtaggaa cggagtcaaa cactcaagcg
     1801 acggatcgtc gcaccgccta cgccgtgcac cttgaaaaac ttcgcaaggg cctggaaaag
     1861 tcctgggatg gcgactggta tcgccgcgca tacttcgatg acggcacgcc actcggctcg
     1921 gcgcaaaacg acgaatgccg gatcgattcg atcgctcaga cctgggcggt catatccggc
     1981 gttgccgaat cgtatcgagc gcagcgagcg atggcggcgg tcgaacaata cctgattcgt
     2041 cgcggcgacg gcctgatcat tttgttcacg ccgccgttcg acaagagcaa actcgatccc
     2101 ggttatgtca aaggttacgt gccgggggtg cgtgagaacg gcgggcagta tacgcacgcg
     2161 gccctgtgga cagtcatcgc gttcgctttg ttgggcgaag gggatcgtgc cggcgagttg
     2221 tttgggttgc tgaatcctat caatcactct tcgacgcggg cgggtttgca caaatacaaa
     2281 gtcgagccgt acgtcgcgcc gggcgacgtc tacgcggtgc cgccacacac gggtcgcggc
     2341 ggctggacct ggtacacggg ttcagcggga tggatgtatc gcgcggcgct ggaatacatc
     2401 ctcggattta agttgcaggg cgaccgcctg cgcgtcgatc cgtgcatccc ccggttctgg
     2461 cgtgaattcg aaatcactta tcggcgcggc aacacgacct atcggatcaa agttgagaat
     2521 ccgcactcgc tgaaccgggg ggtcgccagt gtcgaactgg atggcgttga acaagcaagc
     2581 aaggaaatag cgctgtccga tgacggccag tcgcatgaag tgcgggtcct aatgggagaa
     2641 cggatcgaga acgaaagcac tgaagccccc tcaagagagc agcgcgtaga tcaaatttac
     2701 cagagctgac gctcacagcc ggcaccacct aagaataccg gctatgccta aacctcctcc
     2761 aaacagcggc tccccccttc ttggtttcat cgcctaatga gaccaaatca ctggaacagc
     2821 gcgaagtttt gttgacagcc ggacgcctag cctatatcgt cgcggcctct tgcgtgcacg
     2881 ttatttgcta acaacactaa ccgctgttta aaagctgcgc ggacatccga atccgcgcct
     2941 tactcactga cttggaggac aggcatgaag aaagtaacaa tcacagttgc gatcttatta
     3001 acggcactcg cgatcgcttg ttccaggaac gcgcccggac cgcaaatgac cgcgacgccc
     3061 gctgttatca attgcgccgc ggccgaggtg ccgagcaact ttcccccaac gccaaa
//
LOCUS       DATDBY010000186         2250 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1949260, whole genome shotgun sequence.
ACCESSION   DATDBY010000186 DATDBY010000000
VERSION     DATDBY010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1949260"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1381
                     /locus_tag="VIT19_03480"
     CDS             <1..1381
                     /locus_tag="VIT19_03480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838071.1"
                     /translation="MGFYACLIAFTICYIAARRSLIAGLLTTLAVGYVFGIVKANLPE
                     TASYFIFDSAVLGLYAAQLFQPLNQVLRQKLAGLQSWMEFLIFWPLIVLFFPAQDLLV
                     RLVGLRTSVFFLPFLLIGARLIAEERYKLALGLAALNLLALAFAGAEFFMGVPEFFPR
                     NAATKIIYMSKDVVGHTAFRIPATFANAHAYGGAMVMSLPLMAGALLQMRKKQWHTSL
                     LILGLGAALLGVLLSATRLNFVVITILIIVLTFSIKSRISYAFGWIVIIGAIALFASG
                     EARLQRVTELQDTEFVKERIGWSVNMTFFELAKTYPFGNGLGGGGSSIPHFLQQRLEN
                     PVTMENEYARIMLEQGIFGLCLWLAFLIWLFTRREKGYVDSWSQGRRLAWWACFLSFG
                     TGLIGIGILVSIPQTALLLINAGWIAARQRVPAQQMEFAFRNKQLYDGLANWQRQHMP
                     ALVRGLKKD"
     gene            1381..>2250
                     /locus_tag="VIT19_03485"
     CDS             1381..>2250
                     /locus_tag="VIT19_03485"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEY5838072.1"
                     /translation="MGRTQRFIRGIGFGYAGQVLATLVGLWLTPFLLMRIGKHDYGLW
                     LVGTQLIFYVGLLDFGVVALLPRETAIATGRAGDISDAKDLPSIVGQTARLVFWQTPI
                     VAIAAAVVWFCLPADWAGLQQPIGVVLAAFVLTFPLRILGAILQGLQDFSFLGKTNIV
                     AFIISNAVTIALVLAGFGLYSLAFGWAILQMINAGANWFRLRKHFPGVLPSSLPRLRS
                     SVVRVQLKQGFWISSNQIAQVLLTGTDLLIIGKLFGPLAVVPYACTAKLISVMANQPQ
                     LLIQSASPALSQMR"
BASE COUNT          403 a          627 c          651 g          569 t
ORIGIN      
        1 catgggtttt tacgcctgtc taatcgcatt cacgatttgc tacatcgcgg cacggcggtc
       61 gctgattgcc ggtctgctca cgacgctggc ggttggatac gttttcggaa tcgtgaaagc
      121 caacctgcct gagacggctt cctacttcat cttcgattcg gctgttctcg gcctgtatgc
      181 cgcgcaattg ttccaaccgc tcaaccaggt gcttagacaa aagctggccg ggcttcaatc
      241 gtggatggaa tttctgatct tctggcccct gatcgttctc ttctttccgg ctcaggacct
      301 gctggtgcga ttggtaggct tgcgcaccag cgttttcttc ctgccgtttc tgttgattgg
      361 cgccagactc atcgcggaag agcgttacaa gctggcactc ggtctcgcgg ccctgaatct
      421 tctcgcattg gcgtttgccg gcgccgagtt tttcatgggc gttccggaat ttttcccgcg
      481 caacgccgcg acgaagatca tttatatgag caaagacgtc gtcgggcata ctgcgtttcg
      541 cattcccgcc acgtttgcga acgcgcacgc ctacggcggc gcgatggtca tgagcctgcc
      601 cttgatggcg ggcgcactgc tgcaaatgcg caagaagcag tggcacacct ccttgctgat
      661 cctgggtttg ggcgccgctc tgctgggtgt gctgctctcg gccacgcgtc ttaatttcgt
      721 cgtcataacg attctgatca tcgttcttac gttctcgatc aaatcgcgca tcagttatgc
      781 gttcggctgg atcgtgatca tcggcgcgat tgcattgttc gcctccggcg aagctcgcct
      841 gcagcgcgtg actgagttac aggacaccga attcgtgaaa gagcgcatcg gctggagcgt
      901 caacatgacg ttctttgaac tggcgaagac ttatcccttt ggcaacgggc tcggcggagg
      961 cggctcgagc attccacact ttctacagca acgcctggag aatccagtca cgatggaaaa
     1021 cgagtacgcg cgcatcatgc tcgaacaggg aatcttcggg ctgtgcctct ggctcgcgtt
     1081 tctgatctgg ctgttcacgc ggcgcgagaa aggttacgtc gattcgtggt cacagggacg
     1141 tcgtctcgcc tggtgggctt gttttctgtc gttcggcacg gggctgatcg gcatcgggat
     1201 tctcgtatca attccgcaaa ccgctctcct gctgatcaac gcaggttgga ttgccgcgcg
     1261 gcagagagtt ccggcgcagc aaatggaatt cgcttttcgg aataaacaac tctatgacgg
     1321 cctggcgaat tggcagcggc aacatatgcc ggcgctggtg cgcggtctga aaaaggacta
     1381 atgggacgca cgcaaagatt cattcgcgga ataggcttcg gttatgcggg ccaggttttg
     1441 gcgacgctgg tcggactatg gctgacgccc ttcctgctaa tgcgaatcgg gaagcacgat
     1501 tacggtttgt ggctggtcgg aacccagttg attttttatg tgggtctgct cgatttcggt
     1561 gtggtggcgc tgctgccacg cgaaacggcg attgccaccg gccgtgccgg agacatttca
     1621 gacgcgaaag acctgccgtc gattgtcggt caaaccgcga gactcgtttt ctggcaaaca
     1681 ccgatcgtcg cgatcgcggc cgcggtggtt tggttttgtc tgccggctga ctgggccggc
     1741 ctgcaacaac cgattggtgt agtcctcgcg gcgtttgttc tcacgtttcc cctcagaatc
     1801 ctgggcgcga tcttgcaggg attgcaggat ttcagtttcc tgggaaaaac gaacatcgtc
     1861 gctttcatca tcagcaacgc cgtcaccatc gcactcgtgt tggccggctt tggtttgtat
     1921 tcgctcgcgt tcggctgggc cattctgcaa atgattaacg ccggcgcgaa ctggttcaga
     1981 ttgagaaagc attttcccgg cgtgctgccg tcttcccttc cgcgactgcg cagcagcgtc
     2041 gtgcgggtgc aactgaagca gggattttgg atcagctcga atcaaatcgc ccaggtgctg
     2101 ctgaccggaa ccgacctttt gattatcggc aaattgtttg gaccactggc cgttgttccg
     2161 tatgcctgca ccgcgaaact catcagcgtg atggctaatc agccgcagtt gctgattcag
     2221 tctgccagtc ccgcactcag ccagatgcgc
//
LOCUS       DATDBY010000187         2997 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2890880, whole genome shotgun sequence.
ACCESSION   DATDBY010000187 DATDBY010000000
VERSION     DATDBY010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2997
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2890880"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..909)
                     /locus_tag="VIT19_03490"
     CDS             complement(<1..909)
                     /locus_tag="VIT19_03490"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838073.1"
                     /translation="MTNERFTNPFPGLRPFESTEDHLFFGRDGQSDELLRRLRRSRFL
                     AVRGTSGSGKSSLVRAGMLPSLYGGLMTDAGSSWRVALFRPGHNPIGNLAKALSNPQV
                     LGSGDVDDDDDAALQRTIVEATLRRSALGLVEATRQARMPAVENLLVVVDQFEEIFRF
                     RRMSKGTGPEDESAAFIKLLLEAKKRIDVPVYIVITMRSDFLGDCAQFRDLPEAINDG
                     QYLIPRMTRDQRREAITGPVAVGGGEIAGRLVNRLLNDVGDDPDHLPILQHALMRTWD
                     LWIDDRRNGEPIDLRHYEAVGTMSEAL"
     gene            complement(915..2441)
                     /locus_tag="VIT19_03495"
     CDS             complement(915..2441)
                     /locus_tag="VIT19_03495"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HEY5838074.1"
                     /translation="MSYLPDYEDDIFISYAHNDNQALMEGQRGWVDVFHQALERRLQV
                     HLGAKAAIWRDPRLQGNEYFADTLVEQIPKVAILISVLTPSYINSEWCRREMQMFSGI
                     ATETGGVRLGNKARIFKVEKIYVPLEKHPPELQGMTGYEFYYMDDHRARELSAESGPH
                     AVEYWQRIDDVAQDIATLLQDLKGRGASPDVQVFQEQSGETIYLAETSSDLSPQRDNI
                     KRELQERGHVVIPDRPLPLNGPDLEEDVRHYLEASKLSIHLIGANYGVIPEAADRSVV
                     CLQNDLAAERSQGNGSAGNGFARLIWLPEGLETREARQREFIEFLKYDATAQKGADVL
                     QTSIEELKTYIQDKLRPKPKSVAANGNGNGNGHKTQEGPQRVYLICDKQDYDAIAPVE
                     EHLYNQGFEVTLPLFEGDEAEVREDHKESLLICDAVVIFYGNASEGWLRTKLRDLQKI
                     PGYGRTKPMLAQAIYAGPPENPAKQRYRTREALLLRNFGNFTPDSLQPFIDEIKKVKG
                     "
     gene            2588..>2997
                     /locus_tag="VIT19_03500"
     CDS             2588..>2997
                     /locus_tag="VIT19_03500"
                     /inference="COORDINATES: protein motif:HMM:NF014124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RyR domain-containing protein"
                     /protein_id="HEY5838075.1"
                     /translation="MHTPERDLPKNLHELIESLAENTYNIHARQRLANAKSTAARSAT
                     AFPPYEELPDVEKQDHRNTAVETLKLILNRGFKLEPPKPASPVEEGKGPKAAETATLA
                     LIDAVNLPSAIALWLAHDPEEWARTPEIHRRLGRR"
BASE COUNT          625 a          897 c          839 g          636 t
ORIGIN      
        1 caaagcttcg ctcatcgtgc cgacggcttc gtaatgacgc aggtcgatcg gttcgccatt
       61 gcgccgatcg tcgatccaca gatcccaagt gcgcatcagc gcgtgctgca ggatcggtaa
      121 gtgatccgga tcgtctccga catcgttcag caaacgattg accaggcgcc cggcgatttc
      181 cccgccaccg acggcgaccg ggccggtgat cgcttcacgg cgctgatcgc gcgtcatgcg
      241 tgggatcaga tattgtccgt cgttgattgc ttccggcaga tcgcggaact gcgcacagtc
      301 gcccagaaaa tccgaccgca tcgtgatgac gatgtaaacc ggaacgtcta ttcgtttctt
      361 tgcttccaag agcagtttga tgaatgccgc tgactcgtct tctggacccg tgcccttcga
      421 catgcggcgg aaacggaaaa tctcttcaaa ctgatcgacc actaccaaaa ggttttctac
      481 ggccggcatc cgtgcctgcc gggtcgcttc aactaatcca agcgcgctac gacgcaatgt
      541 cgcttccaca attgttctct gcagcgcggc gtcgtcatca tcatcaacat caccgcttcc
      601 aagcacctga gggttcgaca gagccttcgc caaattgcca atcggattgt gaccgggccg
      661 gaacaaggcc acgcgccaac tggaaccggc gtcggtcatc aacccgccgt agagcgacgg
      721 caacatgccg gcgcgcacca gcgaagactt gccgctgccc gacgtgccgc gcacggcgag
      781 aaaacgactg cgccttaggc ggcgcaaaag ctcatcagac tgtccgtcgc gtccaaagaa
      841 gagatggtct tccgtagact caaacgggcg caatccggga aagggattag taaaacgctc
      901 gttagtcatt gcttctaccc tttgaccttt ttgatttcgt caatgaatgg ctgaagagaa
      961 tcgggagtga agttgccaaa gtttctgagc agcagcgcct cgcgggtgcg ataacgctgc
     1021 ttcgccggat tttcaggtgg cccggcgtaa attgcctgcg ccagcatcgg cttggtgcgg
     1081 ccgtagcccg gaatcttttg caggtcgcgg agtttcgtgc gcagccaacc ttcgctcgca
     1141 ttgccgtaaa agatcacgac cgcatcgcag atcaacaaac tctctttgtg atcttcgcgg
     1201 acttccgctt cgtcaccttc gaacagagga agggtgacct caaagccctg gttgtagaga
     1261 tgttcctcga ccggcgcgat cgcgtcgtag tcctgcttgt cgcaaataag gtaaacgcgc
     1321 tgcggtcctt cctgggtctt gtggccgttg ccgttcccgt ttccatttgc ggccaccgac
     1381 tttggtttcg gtcgcagctt gtcctgaatg taggttttta gttcttcgat cgaggtttgc
     1441 agcacgtccg cgcctttttg tgcggtcgcg tcatatttga ggaattcgat aaactcgcgc
     1501 tggcgcgctt cacgcgtttc caaaccttcg ggcaaccaaa tcaaacgcgc aaagccattg
     1561 cccgcggagc cattgccctg gcttcgctcg gcggcgagat cgttttgcaa gcagacgacg
     1621 gaacgatcgg cggcttccgg aatcacgcca tagttcgcgc cgatcaaatg aatcgagagc
     1681 ttcgacgctt cgagataatg ccgaacgtct tcttcgaggt caggcccatt caacggcagc
     1741 gggcggtcgg gaataacgac atgaccacgc tcttgaagct cgcgcttgat gttgtcgcgt
     1801 tgcggcgaaa gatcggatga agtctctgcc agataaatcg tttcgcccga ctgctcctgg
     1861 aacacctgca catcaggact cgcgccgcgc cctttcaagt cctgcaaaag cgtggcgatg
     1921 tcttgcgcca cgtcatcgat cctctgccag tactcgacgg cgtgcggacc gctctcggcg
     1981 gacagctcgc gcgcgcgatg atcgtccatg tagtagaact catagcccgt catcccctgc
     2041 aactcaggcg gatgtttttc gagcggcacg tagatctttt cgactttgaa gatgcgcgct
     2101 ttgtttccca gccggacgcc gcccgtctca gtcgcgatgc ccgagaacat ctgcatctcg
     2161 cgccggcacc attccgaatt gatgtagctg ggtgtaagaa ccgagatcag gatggcgact
     2221 ttgggaatct gctcgaccag cgtatcggca aaatactcgt tgccttgcag acgcgggtcg
     2281 cgccagatag ctgcctttgc gccgagatgg acctgcagcc ggcgctcgag cgcctggtga
     2341 aacacatcga cccacccgcg ctggccctcc atgagcgctt ggttgtcgtt atgcgcgtag
     2401 ctgatgaaaa tgtcgtcttc gtaatcaggg agatagctca tggcagcctc cgtaacagca
     2461 gacgcgaagg cgttgcagat ttgcgatttt ataccacaag tggggacaga ctgtctccac
     2521 gaatgggaca cgcctgatga agcccgcgcg acatcggcta taatagcccg tcacttcgcc
     2581 gtcgatcatg cacacgccgg aacgcgatct tccaaaaaac ctgcacgaac tgatcgaaag
     2641 tctcgctgag aatacttaca acattcacgc gcggcagcgg ctggcgaatg ccaagtcgac
     2701 cgcggctcgt tcggcgacgg cgttcccgcc ttacgaagaa cttccggacg tcgaaaagca
     2761 ggaccaccgc aacaccgccg tcgagacgct caagctgatc cttaatcggg gcttcaagct
     2821 cgagccgccg aaaccagctt ccccagttga agaggggaaa ggaccgaagg cggcagagac
     2881 ggcgactctc gctttgatcg atgcggtcaa cctgccgagc gcgatcgcgt tgtggctggc
     2941 gcatgatccg gaagagtggg cgcgcacacc tgaaattcat cgccggctgg gacggcg
//
LOCUS       DATDBY010000188         4689 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_435882, whole genome shotgun sequence.
ACCESSION   DATDBY010000188 DATDBY010000000
VERSION     DATDBY010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4689
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435882"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..306)
                     /locus_tag="VIT19_03505"
     CDS             complement(<1..306)
                     /locus_tag="VIT19_03505"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEY5838076.1"
                     /translation="MMNLYVGTSGYSYKEWKGNFYPEDLPAKEMLAYYSRRLPAVEIN
                     NTFYRLPQPGMVENWRDQVPETFRFSIKATQRITHIKRLKNCAEETKYLIETASLLRE
                     "
     gene            complement(311..1024)
                     /locus_tag="VIT19_03510"
     CDS             complement(311..1024)
                     /locus_tag="VIT19_03510"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HEY5838077.1"
                     /translation="MPQTPHTEKHFTAGQTVRDTVIGMADGLTVPFALAAGLTGAIDS
                     ADIIVTAGFAEIAAGSIAMGLGGYLAAKSDAEHYAKEREREKREVVEIPDEEMREVAQ
                     VFKSYGLSDKDSAPIVEALSKNPKKWVDFMMRFELGLEKPDPKRALASALTIGGAYAV
                     GGLIPLSPYVVASAFGSISVTTALLVSVTLTLIALFVFGFIKGRFTGTRPMRSALQTA
                     FIGSVAAGAAFGIARLIGG"
     gene            complement(1176..1448)
                     /locus_tag="VIT19_03515"
     CDS             complement(1176..1448)
                     /locus_tag="VIT19_03515"
                     /inference="COORDINATES: protein motif:HMM:NF013346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM165/GDT1 family protein"
                     /protein_id="HEY5838078.1"
                     /translation="MDWRVLLTTFGIIFLAEMGDKTQLAAMTMAADKKRPWEVFLGAS
                     LALAAVSALGILVGTALGHYLPLDWIKRVAGASFVVIGILILLGKF"
     gene            1564..>4689
                     /locus_tag="VIT19_03520"
     CDS             1564..>4689
                     /locus_tag="VIT19_03520"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5838079.1"
                     /translation="MVEAAKEFRGTERFSLRRKLGAGGMGVVYEAIDRLTNKPVALKT
                     LNRAEPEHIYRLKREFRELADVSHPNLAALYELMSSGRHWFFTMELVQGVQFIEHIRR
                     RGEGEITEGPSTLRRGGEQAILEANTVEFDSSHVLFQSGEVSVSSGSPAFSMPIPEFD
                     ELRLRSALRQLAEGVHHLHEVGKLHRDIKPSNVLITDEGRVVILDFGLVEDVEPASRD
                     TLLVGTPDYMSPEQGAQLPISKASDWYSVGVMLYEALTGRLPFTGRFFEVVIRKQTRR
                     PVQPVEINPRVPNDLNELCMNLLRRRPENRLKGRAVLRFLKASRSSFAVSAAETAFVG
                     RERQLAELDDAFDTMRRGQAVSVYVRGLSGMGKSTLVQAFLEQTKENFADALILQGRC
                     YERESVPYKALDGVVDSLSKYLASLPRESAEALVPRHARALARIFPVLLQVDAIFDER
                     AGAETGDLFTLRRHAFGALRQMLTALAGRQPLIIWTDDLQWADDDSIRLLEDLLRPPD
                     APPLLLIGGFRAEDFETKTFLKQLVQNAGTETCREVVLDRLSNKEASELAASLLAAAK
                     VQGDLFVKSVVAEAAGNPFLVEQLCHYVSIAERAGETGVSLATMLEERIRQLPDGSRE
                     LLNVLAVAARPVNQDVAFAACGAQHHDLQILNAVRAAELVRSGGTAYGIELHHDRIGE
                     TLRTLLPDAERKQIHRRLAQTIEARSFDDPEALYHDYLGAGELARAAFHAEAAARKAA
                     STLAFDRAALYFRRAIDLAPAGTDVVELKIALGDALANAGRPAEAAAEFLEAAKSTAP
                     RRALELQQRAGAQLLMGGHVEEGLAVFEKVLRAAGFKMPKGPKRALLSMLVRRAWIST
                     RGLDFTERDAATISEAELHRIDICWSVAAGLGVVDLIRGAEFQSRHVLLALRAGEVYR
                     VARAMAFETVQTATRGGPAIARARQLADQTEELARRSGHPHAIGLAIWARGLSAYLIG
                     HWKEAAELCERAAEVLRDQCTGATWELTVAHRFMLTSLMFLGELTEVARRVPQLLSVA
                     LEQGNIFAATDL"
BASE COUNT          958 a         1346 c         1407 g          978 t
ORIGIN      
        1 ttcacgcagc agtgaggccg tctcgatcag atacttcgtt tcctcagcgc agttcttcag
       61 ccgtttaatg tgggtgatgc gctgcgtggc tttgatcgag aagcgaaacg tctcgggaac
      121 ctgatctctc caattctcaa ccatgccggg ctgcggcagc cgatagaagg tgttgttgat
      181 ctcaacggcg ggtagacgcc gcgagtagta ggcgagcatc tctttggcgg gcaaatcctc
      241 gggatagaag ttgcccttcc attctttgta gctgtaaccg ctggtgccga cgtagagatt
      301 catcatccaa tcaaccgcca atcaaccgag caattccgaa cgccgcaccc gccgcaacgc
      361 tcccaataaa agccgtttgc aacgcgctgc gcatcggccg ggtgccggtg aagcgaccct
      421 tgatgaagcc gaagacaaac agcgcgatca gcgtcagtgt cacggaaact aacagcgccg
      481 tggtcacaga tatgctcccg aaagccgacg ccacgacgta aggagagagt ggaatcaagc
      541 ccccaacggc atacgcaccg ccgatcgtca gggcactggc gagggcacgt ttcggatcag
      601 gtttttccag gcccagctcg aaacgcatca tgaaatcgac ccacttcttc ggattcttcg
      661 agagcgcttc gacgatcggc gcgctgtctt tgtcgctcag gccgtaggat ttaaagacct
      721 gcgcgacttc gcgcatctct tcgtcgggta tctctacaac ttcgcgcttc tcgcgctcgc
      781 gttccttcgc gtaatgctcg gcgtcgctct tcgccgcgag atatccaccg agacccatcg
      841 cgatcgaacc ggcggcaatc tcagcaaagc ctgccgtcac aatgatgtcc gccgaatcaa
      901 ttgcgccggt tagccctgcg gccagcgcga acggcacggt caacccatcg gccatgccga
      961 tcacagtgtc gcgaacagtc tgtccggccg tgaagtgttt ttccgtgtgt ggcgtctgcg
     1021 gcattgtgct gcttgagtct taactcgcct tcacaaagtc attttccatt ttccattcat
     1081 catttgtcat cgggccattt gaaaaaatgc tgctggcagc ggtgcgcaaa gtaaatggca
     1141 aatgaaagat gtcaaatgac aaatggaaaa tgcttttaga attttccaag tagaatgaga
     1201 atcccaatca caacaaaact cgcgcccgcc acgcgcttaa tccaatcgag cggcaggtaa
     1261 tgaccgagcg ccgtgccgac cagaatgccc aacgcggaga ccgctgccaa cgccaaggac
     1321 gcgccgagga aaacttccca cggccgtttc ttatcggccg ccatggtcat cgccgcgagt
     1381 tgcgtcttgt ctcccatctc tgccaggaaa atgatgccga aggttgtgag cagcacgcgc
     1441 cagtccatgt gaactccttc caatctcgcc gttggcggtc aaaacattga tcgtggcaaa
     1501 tcatgtaagg cacaatcgca tctgtcaatc actcgcgcca acagtcctta acatcgccgg
     1561 gccatggtcg aagcagccaa agaatttcgc gggactgaac gcttcagtct gcgccgtaaa
     1621 ctcggcgcgg gcgggatggg cgtggtgtac gaagcaatcg atcggctgac aaataaaccg
     1681 gtggcgctga aaactctgaa tcgcgccgaa ccggagcaca tctatcgcct gaagcgcgag
     1741 ttccgcgaac ttgccgacgt ttcacatccg aacctggccg cgctttacga gttgatgtcg
     1801 tcagggcgtc actggttttt cacgatggaa ctcgtccagg gcgtccagtt catcgagcac
     1861 atcagacgtc gtggcgaagg cgaaataacc gaagggcctt ccacgcttcg acggggtggc
     1921 gagcaggcga tcctggaagc caataccgtc gagttcgaca gctcacatgt tttgtttcaa
     1981 tcgggcgaag tgtcggtctc gtccggatcg ccagcctttt cgatgccgat acccgagttt
     2041 gatgagctgc gtttacgttc agcgttgagg caacttgccg aaggggtgca tcacctgcat
     2101 gaagtcggaa agctgcatcg cgacatcaaa ccgtcgaacg tgctgatcac cgacgaaggg
     2161 cgcgtcgtga ttctggactt tggtctggtc gaagacgttg aacctgcatc gcgtgacaca
     2221 ctgctggtcg gcacgcctga ttacatgtcg cctgaacagg gcgcgcaact gccaatctca
     2281 aaagccagcg actggtacag cgtgggcgtg atgctctacg aagctctcac cggccgtctt
     2341 cctttcaccg gaaggttctt tgaagtcgtg attcgcaaac aaacgcgccg gcccgttcag
     2401 ccagtcgaga tcaacccgcg agttccgaat gatctcaacg aactctgcat gaacctgttg
     2461 cgccggcggc ccgagaatcg tctaaaaggc cgcgccgtgc tgcggttttt gaaggcgagc
     2521 agatcttctt tcgcggtgtc cgctgcagaa actgcttttg tcgggcgcga gcggcaactg
     2581 gcggaactcg atgatgcgtt tgacaccatg cgccggggcc aggcggtctc tgtttacgtt
     2641 cgcggccttt ccgggatggg caagagcact ctggtgcagg cgtttctgga acagacaaaa
     2701 gagaattttg cggacgcgct gattcttcag ggccgctgtt atgagcgcga gtcggttccg
     2761 tacaaggcgc tcgacggcgt tgtcgatagc ctgagcaaat acctggcgtc attgccgcgc
     2821 gaaagtgctg aggctttggt gccacgtcac gcacgcgcgc tggcgcgaat ttttcccgtt
     2881 ctgcttcaag ttgatgcaat ctttgacgag cgcgcggggg ctgagactgg cgacctattc
     2941 accttgcggc gccacgcgtt tggcgcgctg cggcagatgt tgaccgcgct agcaggccgg
     3001 cagccgctga ttatctggac cgatgatttg cagtgggccg acgacgatag cattcgactg
     3061 ttggaagatc tgctgcgccc acccgatgcg ccaccgctgt tgttgattgg gggttttcgc
     3121 gctgaagatt tcgagacaaa gaccttcctc aagcagttag ttcaaaacgc cggcacggaa
     3181 acctgtcgcg aagtagttct cgatcgtctg tccaataaag aagcttcaga actcgcagcg
     3241 tcattgctcg ccgccgccaa agtccagggt gacctcttcg taaaatcggt cgtcgctgaa
     3301 gccgcgggca atccgtttct ggtcgaacaa ctctgtcact acgtttcaat cgctgaacgg
     3361 gccggcgaga ccggggtcag cctggcaacg atgctcgaag agcgcattcg ccaactgcct
     3421 gacggatcgc gcgagctgct caatgtgctc gcggttgcgg cgcggccggt gaaccaggat
     3481 gtcgccttcg cggcgtgcgg tgcacagcat cacgatttgc agatcttgaa tgcggtgcgt
     3541 gcggcggaac tagtccgcag cggcggcacg gcgtacggaa tcgagcttca tcacgatcgc
     3601 atcggcgaga cgctgcggac gcttctgccc gacgctgagc gaaaacaaat ccatcggcgg
     3661 ctggcgcaaa cgatcgaagc ccgcagcttt gacgatcctg aagcgctgta tcacgactat
     3721 ctcggggcag gcgaacttgc gcgggcggct tttcatgcgg aggccgcggc gcgaaaagcg
     3781 gcgagtaccc tggcattcga tcgagctgcg ctctatttcc ggcgggcgat cgatttggcg
     3841 ccggcgggga ctgacgttgt cgaattgaag atcgctttgg gagacgcgtt ggccaacgcc
     3901 ggacgtccgg ccgaagccgc cgctgagttt ctggaagccg cgaagtcaac cgcccccaga
     3961 cgtgcgcttg agttgcaaca acgcgcgggc gcgcagttgc tgatgggcgg gcacgtcgag
     4021 gaaggactcg ctgttttcga gaaagtcttg cgggccgcgg gattcaaaat gccgaaaggt
     4081 cccaagcgcg ccttgttatc gatgctggtg cggcgggcgt ggatctcgac gcggggactt
     4141 gatttcactg agcgtgacgc ggcgaccatt tcggaagccg aactgcatcg catcgacatc
     4201 tgctggtcgg tcgcggccgg cttgggtgta gtcgatttga ttcgcggcgc agaatttcag
     4261 agccggcacg tgctgttagc gctgcgcgcc ggcgaagtct atcgcgtcgc gagagcgatg
     4321 gctttcgaga ccgtgcagac ggcgacgcgc ggcggacccg cgattgcacg cgcgcggcag
     4381 ctcgccgatc aaactgaaga gctggcgcgc cgctcaggac atccacacgc gatcggattg
     4441 gcgatttggg cgcgcggact cagcgcctac ctaattggtc actggaaaga agccgctgag
     4501 ttgtgcgagc gtgcggctga ggtgttgcgc gatcaatgca ccggcgcgac ttgggagctg
     4561 accgtcgcgc accggttcat gctgacgtcg ctgatgtttt tgggcgagct gactgaggtg
     4621 gcgcggcgag ttccgcagtt gctttcggta gcgcttgagc agggaaacat tttcgccgct
     4681 acggacctg
//
LOCUS       DATDBY010000189         2205 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1867055, whole genome shotgun sequence.
ACCESSION   DATDBY010000189 DATDBY010000000
VERSION     DATDBY010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1867055"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..377)
                     /locus_tag="VIT19_03525"
     CDS             complement(<1..377)
                     /locus_tag="VIT19_03525"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEY5838080.1"
                     /translation="MKTWQVIDAMVISDAREAAEYGLMEAGAIGTETRDDANGCVNIA
                     AYFDTAESRKTAHETVLEALQIYGFDKTALLGFQTRAIADQDWLAEWKKHWRPVEVGR
                     FIIAPPWSEAPAPGDHLVIRINPG"
     gene            complement(374..1261)
                     /gene="era"
                     /locus_tag="VIT19_03530"
     CDS             complement(374..1261)
                     /gene="era"
                     /locus_tag="VIT19_03530"
                     /inference="COORDINATES: protein motif:HMM:NF000908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEY5838081.1"
                     /translation="MNFRSGYVALVGRPNAGKSTLLNRLVGEKIAAVSNKPQTTRFKI
                     LGIVNRPEGQIVLVDTPGVHKPGYELNRRMMSAVHDALLAVDVVCLIRDASAATGNGD
                     RFVLDLVKQSDKPAILLLNKTDKLADKSDLLPLIESYQKEHDWKAIVPISALKGDQIE
                     QLLHEMSENLPEGVPIFSDDEFTDQSMRALAAEIVREKILETTGEEIPYVTAVVTERW
                     EEEREDFTRIYCTIFVERESQKKIIIGRGAQRLKQIGTRARGEIEKMLGHRCHLQLFV
                     KVEEDWRDKQRLLNEMGIA"
     gene            complement(1258..>2205)
                     /locus_tag="VIT19_03535"
     CDS             complement(1258..>2205)
                     /locus_tag="VIT19_03535"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEY5838082.1"
                     /translation="LSGNHAEIAEMKLAQFKPKNAKQPGLGVLLGDVVCDVAELARAR
                     QSGGAPVADWLLEANSTLDVVNRGAEGVEQLNALLTLQTGPGSAIAGFSEADIEFLPA
                     VRPGKMLAIGRNYADHAIEGGGEPPKAPLIFAKLSNALSAHNAPIVLPTVSETIDWEA
                     ELAIVIGRRAQAVSEADALDYVFGYTLMNDVTARDLQRKDGQWTRGKGLDTFAPLGPF
                     ITTRDEIEDIQNLKIEGLYNGEVTQTSNTSKMIFSIAYLISYISQGITLEPGDVIATG
                     TPEGVGFFRDPPVLLKPGDVCEVRVEKLGTLRNPVVAPQ"
BASE COUNT          438 a          653 c          605 g          509 t
ORIGIN      
        1 ccgggattga tacggatgac gagatggtca ccaggagcag gcgcttcgga ccacggcggc
       61 gcaatgatga atcgacctac ctcgacgggc cgccaatgct tcttccattc cgctaaccag
      121 tcttgatcgg cgatcgcgcg cgtttgaaat ccaagtaatg cagtcttgtc gaagccgtag
      181 atttgtaaag cctcaagcac cgtctcgtgc gccgttttgc gtgactcagc cgtatcaaag
      241 tacgcggcga tgttcacaca gccgttcgcg tcgtccctcg tctcagttcc gatggcgccg
      301 gcttccatca ggccgtactc ggccgcctcg cgagcatcgc tgatgaccat cgcatcgatg
      361 acctgccagg tcttcatgcg attcccattt cgttcagcag acgctgtttg tcgcgccaat
      421 cctcttcaac cttgacgaag agttggagat ggcagcgatg gcccagcatc ttctcgatct
      481 ccccacgcgc gcgcgtgccg atttgtttca gccgttgagc gccccggccg atgattatct
      541 ttttctgtga ctcacgttcg acgaagatcg tgcagtaaat ccgggtgaag tcttcgcgct
      601 cctcctccca acgttcggtc acaacggcag tgacgtaagg aatctcttcg ccagtcgttt
      661 cgagaatctt ttcgcggacg atctctgccg ccagtgcgcg cattgattga tcggtgaact
      721 cgtcatcgga aaagatgggc acgccttccg gcaagttctc gctcatctcg tgcaacagtt
      781 gttcgatctg atcgcctttc agggcagaga tcggcacaat cgctttccaa tcgtgctctt
      841 tctggtacga ctcgatcagc ggtaacaggt ctgacttgtc agcaagcttg tcggttttgt
      901 tcagcagcag gatcgcaggc ttgtccgact gctttaccag atccagcacg aagcgatcgc
      961 cattgcccgt cgccgccgac gcatcacgaa tcagacaaac gacatccacc gcgagcagcg
     1021 catcgtgtac cgcagacatc atgcgccggt tcagttcgta tcccggtttg tgcacgcccg
     1081 gcgtatcgac caggacaatt tgtccttccg gacgattaac gatgccgagg atcttgaagc
     1141 gggtggtttg cggcttgttc gagacagcag cgatcttttc gcccacgagc cgattaagca
     1201 gcgtagattt gcccgcgttt ggacggccca cgagcgcgac gtaaccggat cggaagttca
     1261 ttgtggagcc acgaccggat tgcgcagggt gccgagcttt tcaacgcgca cttcgcaaac
     1321 gtcacccggc ttaagcagca ccggcggatc gcggaagaaa ccgacgcctt caggagtgcc
     1381 agtggcgatg acgtctcccg gttcaagcgt gatgccctgc gaaatgtagg aaatcaggta
     1441 agcaatgctg aagatcatct tgcttgtatt cgaagtctga gtgacttcgc cgttatacaa
     1501 gccttcaatc ttcaggtttt gaatgtcctc gatctcatca cgcgtggtga tgaagggacc
     1561 aagcggcgcg aatgtgtcga ggcctttgcc acgcgtccat tgtccatcct tgcgttgcag
     1621 atcgcgggcc gtcacatcat tcatcaacgt gtagccgaaa acgtaatcaa gcgcgtcggc
     1681 ttcgctgacg gcctgtgcgc gacggccaat tacgattgcc agttccgcct cccaatcgat
     1741 cgtctcgctg actgtcggca gcacaatcgg tgcgttgtga gcgctcaggg catttgaaag
     1801 tttcgcgaag ataaggggcg ctttcggcgg ttcgccgcca ccttcgatgg catgatcggc
     1861 gtaattgcga ccaattgcga gcatcttgcc gggacgaacc gccggaagaa actcgatgtc
     1921 tgcttcgcta aaaccagcta tggctgatcc cgggccggtt tgaagagtca ggagcgcgtt
     1981 cagctgttcg actccttccg cgccgcgatt gacgacgtcc agcgtgctgt tcgcttcgag
     2041 caaccaatcg gcgactggtg cgccgccgga ttgccgggcc cgcgccagct cagcgacatc
     2101 gcacacgaca tcgccaagca gaacgcccaa acccggctgt ttcgcgtttt tcggtttgaa
     2161 ttgagccagt ttcatttccg cgatctcagc atgattgccg ctcag
//
LOCUS       DATDBY010000190         7728 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1063635, whole genome shotgun sequence.
ACCESSION   DATDBY010000190 DATDBY010000000
VERSION     DATDBY010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 7728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7728
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1063635"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..810)
                     /locus_tag="VIT19_03540"
     CDS             complement(<1..810)
                     /locus_tag="VIT19_03540"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5838083.1"
                     /translation="MSSPAGKPNVLLLLNSFETGGAEGQLVLLARLLIESGRFGVHLA
                     GLSGTGPLLAEAERLGIGPIPEFPLTSFYDRNMFKQLRRFRSFLRERKIDVVHTDGFY
                     TNVFGIIGAKLAGVPARIGFRGETQTDGRTPAQNFIERSAFRFASVVHANSEAVKDFL
                     VEQGVPARDIAVVYNGLEFARVIPPPALTRDAALDGLHLPRERRFVTMVANLHNPVKD
                     YPMFLRAAASVHANISNAAFVVAGEGEMLEDLRALARDLRIEQDVFFIGRCN"
     gene            complement(807..2351)
                     /locus_tag="VIT19_03545"
     CDS             complement(807..2351)
                     /locus_tag="VIT19_03545"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEY5838084.1"
                     /translation="MNNEPAKSSSLTARTSWLIFAKTLGFAFGFALPLLLVRRLNQAD
                     FGLYRQAFLVVGTASGILPLGFATSAFYFLPRERDKRGAIVFNIVLFNLVVGGVGVLI
                     LLLAPQSLRVILNSQALVPYAPYIGLLILLGIVSYFLEIAAIANQEARLATVFIIVAQ
                     FVKTALLLAAALVFASLGMLLWAAIIHGIVQTAVLVFYLRSRFVGFWREFDSSMMRRQ
                     LSYGLPLGFAGLLYIVLTDLHNYFVSYRFGTSAFAVYAIGCFSLPLVGIIGESVGPVV
                     IARVSELQKQGKQREIVQTIAGAMRKLAIIYFPLYAFLLVVGREFIVFLFTEKYLASW
                     PIFAINLTTLPFLVLIADPVIRSHAEHRFFLLKVRAVTIVGLAAALWFGTKYFGLLGA
                     VSAMVAITVVDRLVEAIKAWRIMNVTPRDVVLIKDVGKAAVAALATASVTAMIRVVMV
                     GQRPFLVLVACGLTFGGLYPVLVWLVGVPTPEERALIRRTIGRLTKWLPGKRELPADA
                     RRIEAS"
     gene            complement(2348..3568)
                     /locus_tag="VIT19_03550"
     CDS             complement(2348..3568)
                     /locus_tag="VIT19_03550"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5838085.1"
                     /translation="MTNRRDNIAHILPWPSVGGTEHATLRLARAVAPRYQSKVFCLDD
                     ATNVSKLFSDQGFETFSYQPIVPSYRHVNRFLRDSYGLAQEFKRQEIGVIHCADILAG
                     YHAAVAGRIAGLPVLCHVRNRYADLATRDAIFLRAVSKFIFVSLDTRQTFGMRLPARR
                     AEIVYDGISISPAANDARAMNDARDAVRAEFGLPPQTKLIGMVARVAAQKDYETLAKA
                     AARISPAHPDLRFMIVGDNSLEAVHREHYEKVMAILTSLGVESRFVFTGFRADVSRMI
                     AALDVFVLSTHFEGFPLVILEALAHQKPVVATAVDGIPEIIVNDVTGLLAQPRNDHAL
                     AAQLDVVLRSAELARRLGAAGRDSVERNFSSQRFAANMLDLYDRVIDESPSRSGSTRE
                     PHGNLHAPKTITSE"
     gene            complement(3582..4883)
                     /locus_tag="VIT19_03555"
     CDS             complement(3582..4883)
                     /locus_tag="VIT19_03555"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5838086.1"
                     /translation="MALPQTYIDTAHEPLAQKSPAPLKLLWLFPLDQRANIAHGGNLR
                     LFNYGKELVAKGHEVYLVTLKTAPDEESESSAFFDELKRRRIVSACFEVEYQHPWLRG
                     KIAHLLTYPGLANSLLRKQQAPVVQSVREIIAARNIDVCVVSSRDLLFVVPKINVQVK
                     TVIDWVDSYFLYHLREARMHLKQFRFARAARAARLMTEAFLRESYFGRRATANITVSP
                     VDKKYLDLANRARQKNRVLPNGVTASTAKPSAKIKGRLIFTGNMDFPPNYESALWFID
                     NVFPLLQQRWEIRLVIAGANPVKELLARANERIEVTGYVDDIRNEIARSELYVAPLIC
                     GGGFKNKVVEAISSGTFVIGTSLATEFLPAEARDCIPTADSPHELAELILNYLDAPQR
                     FAGNLEALRRNVVDQSSWNLRAEQFVDIIRPEALRESFARS"
     gene            complement(4923..6080)
                     /locus_tag="VIT19_03560"
     CDS             complement(4923..6080)
                     /locus_tag="VIT19_03560"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY5838087.1"
                     /translation="MSLRLIIEITFWFAVAALFYTYAAYPVLVTLVSVLRPRRLKRGP
                     YQPTVSVIITAYNEERDIAGKLENTLALDYPKELLEIIVASDCSSDQTDEIVHSFESR
                     GVQLYRQPQRLGKTTAQNAAVERATGEILLFSDATTMYQPGVLRAMMPNFADETVGCV
                     AGRLIYVDPSGSTVGHGNVSYWNYETFVKKHESRACSLIGASGCMYAVRRSAYLPLYP
                     EAHGDFLIATKMVQQGLRTVFEPDAVCTEETNQRVSNELSMRVRVITQTFNDLWRHRA
                     MLNPFRSGFFAVQLFSHKVMRYLVPFFLVLTIATSAALVTTSLLYRLAFAIQVIGYVC
                     AALSAALERVGIRSRMLALPQYFVLANLASVLALYKLVRGERYARWEPIRE"
     gene            complement(6077..7537)
                     /locus_tag="VIT19_03565"
     CDS             complement(6077..7537)
                     /locus_tag="VIT19_03565"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEY5838088.1"
                     /translation="MPGVRANAGYSSVTPSRARREASAISTKPVAIENNQRVETRSVS
                     PNLRAVKPVPALSTGHKFSYAALFAFTLVLYVRPSELSSSPIAASIALVVGVITLAFF
                     LPTQLALEGNLSAPLTEVKLAVLFAMMAVVNIPLAMSPGDAWQTFSGTFIRCVVMFVV
                     LVNVVRTEARLKGLFYLAIGAAVFLSIGAINEYRHGLAAVEGYRVSGRGVGMFGNTND
                     MALFVVTVIPITITLFLLSRRKIGKILFGALAAVMLASIVLSYSRGAFLGLVVVLIFF
                     AMKLGRGHRAAIIAVILLLSIGFLFLAPGNYGLRLLSIFVPSLDPVQSADARRAELFR
                     SIYTAIRHPFFGIGMGNYMSQMSLRGIETHNAYTQVAAEMGLAALACYTMFVVSPLRK
                     LGQIVRETFNARANTRYYYLALGLQASLIAYMVSSFFLSVAYLWYVYYLVGYAVCLRR
                     IYEAETGKAVVVEPRKERKKNRDEAVLSNSTAGVIA"
BASE COUNT         1842 a         2254 c         2152 g         1480 t
ORIGIN      
        1 attgcatctc ccgataaaga aaacatcctg ctcgattcgc agatcacgcg cgagtgcgcg
       61 cagatcttca agcatctcgc cttcgccggc gaccacaaaa gccgcattcg aaatgtttgc
      121 gtgaacggaa gctgcggcgc gcaggaacat cggataatcc ttcaccggat tgtgcaggtt
      181 cgcgaccatc gtgacgaacc gtctctctcg cggcaaatga agaccgtcca gcgccgcgtc
      241 gcgagtcagg gccggcggcg ggatcactcg cgcaaactcg agtccgttgt aaaccaccgc
      301 gatgtctcgc gcaggcacgc cctgttcaac caaaaagtct ttcaccgctt cagagtttgc
      361 gtgaacgaca ctggcgaaac gaaacgctga gcgctcgatg aaattctgtg cgggcgtacg
      421 tccatcggtt tgcgtctcgc cgcgaaaacc tatgcgcgcc ggcactccgg ccaacttcgc
      481 gccgatgatg ccaaaaacat ttgtgtagaa gccgtcggtg tgaaccacgt caatcttgcg
      541 ctcgcgcagg aatgatcgaa accggcgaag ctgtttgaac atgttgcggt catagaagct
      601 ggtgagcgga aactcgggaa tcggaccgat accaagtctc tctgcttcgg cgagcagcgg
      661 gccggtgcca ctcaacccgg cgaggtgcac tccaaaccgt ccgctttcga tcagcaagcg
      721 cgcgagcagc acgagttgcc cttccgcccc gccggtctcg aagctattca gtaacagcag
      781 aacgtttggt tttccggctg gcgaactcat gatgcctcaa tcctccgcgc gtcagccggt
      841 aactcgcgct tcccgggcag ccacttcgtc aaccggccaa ttgtgcggcg tattaaagcg
      901 cgctcctcag gagttggaac gccaacgagc caaaccagga ctggatataa gcccccaaaa
      961 gtcaggccac acgcgaccag gacgaggaat ggacgctggc cgaccatgac aacccgaatc
     1021 atcgccgtga cggacgcggt ggcaagcgcg gctactgctg ccttgcccac atccttaatc
     1081 agcacgacat cacgcggagt gacattcatg atgcgccagg ccttaatggc ttcgaccagc
     1141 cgatcgacta cggtgatcgc gaccatcgcg gaaacggcgc cgagcaaacc gaaatatttt
     1201 gtgccgaacc aaagcgccgc agccaatccg acaatggtca ccgcgcgcac cttcagcaga
     1261 aagaaacgat gttcggcgtg cgaacgaatc accgggtcgg cgatgagcac caggaacgga
     1321 agcgtcgtca ggttaatcgc gaagatgggc cagctcgcca ggtacttctc cgtaaacagg
     1381 aacacgatga actcgcgccc gacgaccagc agaaaagcgt aaagcggaaa atagatgatc
     1441 gcgagcttgc gcatcgcgcc cgctatggtt tggacgatct ctcgctgctt cccttgtttc
     1501 tgaagttcgc tgacgcgcgc gataacaacc ggaccaacgg actcaccgat aatgccgacc
     1561 agcggcaagc tgaaacaacc gatagcgtaa accgcgaaag cgctggtgcc gaaccgatac
     1621 gacacgaaat agttatgcag gtcggttaag acgatgtaga gcaacccggc gaaacccagc
     1681 ggcaacccgt aactaagttg tcgccgcatc atggatgaat cgaactctcg ccagaaacca
     1741 acaaagcgcg atcgaagata gaagaccaac acggcggtct gcacaatgcc gtgaataatt
     1801 gctgcccaga gcagcattcc cagcgatgcg aagactagcg ccgcggcaag gagcaatgcc
     1861 gtcttaacaa actgcgcgac gatgatgaag actgtggcga gccgtgcttc ctgattcgcg
     1921 atcgcggcga tttccaggaa gtaactcaca atgcccagca gaatcaggag tccaatgtag
     1981 ggagcgtacg ggacaagggc ctggctattg agaatcacac gcaacgattg cggcgccagc
     2041 aatagaatca agaccccgac tccgcccacg accaggttaa acaggactat attgaagaca
     2101 atcgcgcccc gtttatcgcg ctcgcgcgga agaaaataga acgcgctggt cgcgaaaccg
     2161 agcggcagga ttcccgaagc cgtgccaacg acgagaaacg cttgcctata aagtccgaag
     2221 tctgcctggt taagccggcg cacaagcagc aacggcaaag cgaagccgaa ggcgaacccc
     2281 agcgtcttcg cgaaaatcag ccacgaagtt cgcgccgtca aagatgaact ttttgcgggt
     2341 tcgttgttca ttcgctggtt attgtcttcg gcgcgtgtag gtttccgtgc ggttcgcgcg
     2401 tcgagcctga gcgcgatggc gactcgtcga tcacgcggtc gtaaaggtcg agcatgttcg
     2461 ccgcaaatct ttgactgcta aagttccgct cgacagagtc gcggccggca gcgccgagcc
     2521 gccgggcgag ttctgctgaa cgaagaacta cgtcaagctg ggccgccaaa gcgtgatcat
     2581 tgcgcggttg ggctaacagc ccggtcacgt cattgacgat aatttccgga atcccgtcga
     2641 cggcggtcgc gactaccggc ttctggtgcg ccaacgcctc gagaatcacc agcgggaagc
     2701 cctcgaaatg cgtgctcaag acaaacacgt cgagtgcggc gatcatccgg ctgacatcgg
     2761 cgcgaaatcc ggtaaataca aaccgcgatt cgacaccgag actggtaagg atcgccatca
     2821 ctttttcgta atgctcgcga tgcaccgctt cgagcgaatt gtcgcctacg atcatgaatc
     2881 ggagatccgg atgagcgggc gagatccgcg ctgcagcttt cgcgagcgtc tcgtaatcct
     2941 tctgcgccgc gacgcgcgca accatcccga tgagttttgt ctgcggcggt aatccgaatt
     3001 ctgctctcac cgcgtctctt gcatcattca ttgcccgcgc gtcgttggcc gccggtgaaa
     3061 tcgaaatgcc gtcgtagacg atttcagcgc gacgggcggg caggcgcatc ccgaatgtct
     3121 gacgcgtgtc gagcgacacg aaaatgaatt tgcttacggc gcgaagaaag atggcgtcgc
     3181 gcgtggcgag atccgcgtac cggtttctca cgtggcatag cacgggcaaa cccgcaattc
     3241 gtccggcgac cgccgcatga tagccggcca gaatgtcggc gcagtgaatg acaccgatct
     3301 cttgacgctt gaactcctgt gcgagcccgt acgagtcacg aaggaatctg ttcacatgac
     3361 gatagctggg aacaatcggc tgataagaaa aggtttcgaa accctgatcc gaaaacaact
     3421 tgctgacatt cgtcgcgtcg tcgaggcaga acactttgct ctgataacgc ggggcgacgg
     3481 cgcgcgccaa acgcaacgtc gcgtgctccg tcccgcccac cgatggccac ggcagaatgt
     3541 gtgcgatgtt gtcacgacgg ttggtcatat ccgattaatg atcacgaacg agcgaaactt
     3601 tcccgcagag cctcggggcg aatgatgtca acgaactgct cagcacgcag attccagctg
     3661 gactgatcaa caacatttcg ccggagggct tcgaggttac cggcaaaccg ttggggcgcg
     3721 tccagatagt tcaagatcaa ttctgcgagc tcgtgcggag agtcggccgt ggggatgcaa
     3781 tcgcgcgctt ctgcggggag aaactcagtc gccaggctgg tgcctatcac aaatgttcca
     3841 ctactaattg cttcgacgac tttgttcttg aaaccgccgc cgcaaatcaa tggcgcaaca
     3901 taaagttcgc tgcgcgcgat ttcgttcctg atgtcatcga cataaccagt cacttcgatc
     3961 cgttcgttcg cacgcgccaa cagttctttc accggattgg cgccggcgat caccaaccga
     4021 atctcccaac gctgctgtaa cagcgggaaa acgttgtcga taaaccagag cgccgactcg
     4081 taattcggag gaaagtccat attgcccgtg aagatcaatc ggcccttgat cttcgcgctc
     4141 ggtttcgctg tgctcgcggt cacgccgttc ggcaacacgc gattcttttg gcgagctcgg
     4201 ttagcgagat ccagatattt cttgtcaact ggtgaaaccg taatgttcgc cgtggcgcgc
     4261 cggccaaaat acgattcacg gagaaaggct tcggtcatta accgggccgc gcgcgcagcc
     4321 cgcgcgaacc gaaattgttt caggtgcatt cgagcttccc tcaggtgata caggaaatac
     4381 gaatccaccc aatcgatcac cgtcttcact tgcacgttga ttttcggaac gacaaacagc
     4441 aagtcgcggg acgagacgac gcaaacgtcg atgttgcgcg cggcgataat ctcccggaca
     4501 gattgaacca cgggggcttg ttgctttcgc agcagggagt tcgccagtcc cggataagta
     4561 agcaggtggg caatcttccc gcgcagccac ggatgttggt actcaacttc gaaacacgcc
     4621 gagacgattc gacgacgctt gagttcatcg aaaaacgcgc tgctttcgct ttcctcgtcg
     4681 ggcgccgttt tcaacgtaac caaatagact tcgtgccctt tggcgaccaa ctccttcccg
     4741 tagttgaaca gtctcaggtt gccgccatgt gcgatgtttg ctcgttggtc cagcgggaac
     4801 aaccacagca gtttcaaggg cgcgggagat ttctgcgcca gcggctcatg agctgtatca
     4861 atgtaggttt ggggcagggc catgtcattg cgcgccgtcc gaggatctga cgcattgctt
     4921 gtttactcgc gaatcggttc ccaacgggcg tagcgctcac cgcgcacaag tttgtaaagg
     4981 gcgaggaccg aagcgagatt cgcgagcacg aaatactgcg gcagcgcgag cattcgacta
     5041 cgaatgccga cgcgctcgag tgcggctgac agcgcggcgc aaacgtagcc tatgacttga
     5101 atcgcaaaag cgagccggta aagcagtgat gtcgtcacca gcgccgctga ggtggcgatc
     5161 gtcaagacca ggaagaacgg caccagatag cgcatcactt tgtgcgagaa gagctggacg
     5221 gcaaaaaacc cgctgcgaaa cggattaagc atcgcgcgat gccgccacag atcgttgaat
     5281 gtttgcgtga tgacacgcac acgcatgctc agctcgttgc taacacgctg gttggtctct
     5341 tcagtgcaga ctgcgtcagg ttcgaagacc gtgcgcaagc cttgctgcac catcttggta
     5401 gcgatgagga agtcgccgtg cgcttccggg tagagaggca gataggcgga gcgacggacc
     5461 gcatacatgc agcctgacgc gccaatcaaa gagcacgcgc gactctcgtg tttcttcacg
     5521 aacgtttcgt agttccagta cgaaacgttg ccgtgcccga cagtcgatcc gctgggatca
     5581 acgtagatca gccgtcctgc tacacagcca accgtttcgt ccgcaaagtt cggcatcatc
     5641 gcgcgcaaca cacctggttg gtacatcgtg gtcgcgtcag agaagagtag gatctctccg
     5701 gtggcacgct cgacggcggc gttctgcgcc gtcgttttgc cgaggcgttg tggttgacga
     5761 tagagctgca cgccgcgcga ctcgaagctg tgtacgatct cgtcagtttg atcggacgag
     5821 cagtctgacg cgacgataat ttccagaagc tctttcggat aatcgagcgc cagtgtgttc
     5881 tcgagcttgc cggcgatatc gcgttcttcg ttataggccg tgatgatcac gctcaccgtt
     5941 ggttgatacg gaccccgctt gaggcggcgc ggtcgtagca cgctgaccaa agtcacaagc
     6001 accggataag ctgcataagt gtagaaaagc gccgccaccg cgaaccagaa agttatttcg
     6061 ataatcagcc gcagactcat gcaatcaccc cagcagtcga gtttgataag acggcttcgt
     6121 cccggttttt ctttcgttct ttccgaggtt ccaccaccac agccttgccg gtttcagctt
     6181 cgtagatgcg ccgcaaacaa acggcgtaac ccacgaggta atacacgtac cagagatacg
     6241 ctaccgacaa gaaaaagctg gacaccatat aagcaatcag cgaggcctga aggccgaggg
     6301 ccagatagta atagcgggtg tttgcgcggg cgttgaaggt ctcacgcaca atttgcccga
     6361 gcttccgcag cggactcacc acgaacatcg tgtagcaggc gagcgccgcc aaacccatct
     6421 cagcggccac ctgcgtgtaa gcgttgtgcg tttcgatgcc tcgcaaagac atctgactca
     6481 tataattgcc catcccgatt ccgaagaagg ggtggcgtat cgcggtgtaa atcgatcgaa
     6541 agagttcggc gcggcgggca tccgcggact gcaccggatc aagactcgga acgaagattg
     6601 agagcaatct cagaccgtaa ttgcccggcg ctaaaaacaa gaagccgatg ctcagcagta
     6661 gaatcaccgc gataatagcg gcacgatggc cacgaccgag cttcatcgcg aagaaaatca
     6721 gcaccacgac taacccgaga aatgccccgc gcgaataaga cagaacgatt gacgcgagca
     6781 tcaccgcggc cagcgcgcca aacagaatct ttccaatctt gcggcgcgac aacagaaaca
     6841 gcgtgatggt gatggggata acggtaacca caaacagcgc catgtcgttt gtgtttccaa
     6901 acatgccgac gcctcggccg ctcacccgat agccttcaac cgcggccaac ccgtgccgat
     6961 actcgttgat ggctccgata cttaagaaaa ctgcggcgcc aatcgccaaa tagaaaagac
     7021 ccttcagccg tgcttcggtt cgcacgacat taaccaggac gacaaacatc acgacgcagc
     7081 gaatgaacgt cccgctgaac gtctgccacg cgtcgccggg actcatcgcc aaagggatgt
     7141 tcaccactgc catcatcgcg aaaaggaccg cgagcttcac ttcggttagc ggcgcgctga
     7201 gattgccttc gagcgccagt tgcgtcggca gaaagaacgc caacgtaatg acgccaacga
     7261 ccaaagcaat ggaagccgcg atcggcgatg aagaaagttc gctgggtcgc acataaagaa
     7321 cgagcgtgaa ggcaaaaagc gccgcgtacg aaaacttgtg accggttgaa agcgccggta
     7381 ctggtttcac tgcacgcaga ttcgggctta ccgatcgggt ctcaacccgc tggttgtttt
     7441 ctatggcgac gggtttcgtt gaaatcgcgg acgcttcgcg gcgcgcacgc gaaggcgtga
     7501 ccgacgaata acccgcattt gctcgtacgc ccggcatctg gaatttgtcc ttgtaaacta
     7561 aagaagcgca gtatcctgcg cttctcgata acctggttgt cctcaagttc ggcgcagcta
     7621 agctaccgct tcctcgccgt caaccaccat cacgcgcact cgctcacgca gggccaattc
     7681 aaacatgcgc gcttcctcaa cctccgagaa tgacagcgcc cgcagctc
//
LOCUS       DATDBY010000191         3959 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_431992, whole genome shotgun sequence.
ACCESSION   DATDBY010000191 DATDBY010000000
VERSION     DATDBY010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3959
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431992"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..718
                     /locus_tag="VIT19_03570"
     CDS             <1..718
                     /locus_tag="VIT19_03570"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838089.1"
                     /translation="MMISAEYPPEEAINVMKLLSKDIEGEQIKLFYNDHPELQERVRY
                     LTSYLGSRADKVTPQMALNREKAAYFRKMQPVMRHNVQLAINAARFRSAVFFAQRLAD
                     FDPDSAENVFLLAEAYRTLGPRSPELTSRELTNSAKKDAVKKREKRTAEVLERELLAT
                     PAGQENWKNHQQKAEELYLRSLGLNAPVPAAHRGLGMLYEKLGRTAEAVSAYEKYIER
                     APAAFDRERILRRIETLRRT"
     gene            719..1432
                     /locus_tag="VIT19_03575"
     CDS             719..1432
                     /locus_tag="VIT19_03575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838090.1"
                     /translation="MISHPSFLNLNKLRTAVLAAAVVISAVVLPSAARAQFLHPKIVK
                     KETTIRNVVVLPAKVDITRDSMKGPEGMAAESEAVSERVAKLVSDALANKQVATLSGP
                     MSATGDVATEQKYGVADIQSRYDDLLPKIMKKRSDVKKARFTMGDEVLNLNLDKNADA
                     IVFIRGKGQKQTSGKTAFRLLVGGVPAYLQVTIGIVDARTGEVLLYTDGVITGDPTAN
                     EGSLRHAITKSLKKLPGAS"
     gene            complement(1521..2699)
                     /locus_tag="VIT19_03580"
     CDS             complement(1521..2699)
                     /locus_tag="VIT19_03580"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY5838091.1"
                     /translation="MKSLDLIINSYDPSTPIERASTIPAPWYTDERVFELEQRTVFSR
                     SWQVAARVDQLHNSGDYVTTEIGDEPIVVVRGADNQVRAFFNVCRHHAAAVMTEPHGN
                     APQMRCPYHGWTYSLEGELKGTPDFSGVCEFDRTGNGLIPVEVAVWQNWVLVRSNGGQ
                     LIGTQAAGLLSTPEACVPQNESIENWLGSQLVNEMGVLGLSNLHWFERRKYIIDCNWK
                     VFVDNYLDGGYHVPHLHKGLDSVLDYSNYTIECGQRHCLQSSPMVTTDTADIAATRTG
                     ERALYYWIYPNFMINCYAGVMDTNLVRPISVDRTEVIFDFYFADVSENAREQNLTSVA
                     VGDRIQQEDLDICASVQRGLKSRVYDTGRLSVRREAGEHLFHRLLHADLKAGLTVASE
                     "
     gene            complement(2955..>3959)
                     /locus_tag="VIT19_03585"
     CDS             complement(2955..>3959)
                     /locus_tag="VIT19_03585"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyltransferase family protein"
                     /protein_id="HEY5838092.1"
                     /translation="RLVDRIITRDMRKVSVGQVIYTPWCDEHGKVIDDGTVARLEENV
                     YRWTAADPSLRWFTQNAAGLDVQIEDISESVAALALQGPTSGRLLKAVVADADIENLK
                     YFRVTRGTIAGVPVEVSRTGYTGDLGYEIWLPAADAVKVWDTLIDQGRPFDIKPTGML
                     ALDVARIEAGLLLIDIDFNSSKKALIEPQRYSPFEMGLGRLVSLDKQKFVGRAALIAE
                     QKRGTPRGIVGLEIHWPEVETIYENVGLPPAVSPIASRVAVPVYSNGTQLGKATSSTW
                     SPTLKKMIALATLKSDFAKVGSKVEVEITVEAVRHRVPATVTKTPFYNPKHKMATPIT
                     "
BASE COUNT          894 a         1123 c         1101 g          841 t
ORIGIN      
        1 catgatgatc tcagccgagt atccgcctga agaagccatc aacgtgatga agctgctcag
       61 caaagatatt gaaggcgagc agataaaact tttctataac gatcaccctg agttgcagga
      121 acgggttagg tacctgacat cttatctcgg ttcgcgcgcg gacaaagtaa cgccgcagat
      181 ggcgctgaat cgcgagaagg ccgcgtattt ccggaagatg caaccggtga tgcggcacaa
      241 cgttcagttg gccatcaatg cagcgcgatt tcgatcagcc gtcttctttg cccagcggct
      301 ggcggacttc gatcctgact cagcggaaaa cgttttcctg ttggccgaag cgtatcgcac
      361 tctcggcccg cggtcgcccg agctgacgtc cagagaactg acgaacagcg cgaaaaagga
      421 cgcggtcaaa aaacgcgaga agcgtactgc cgaagtactc gagcgcgaac tgctggcgac
      481 cccagccggc caggagaact ggaaaaatca tcagcaaaag gctgaagagt tgtatttgcg
      541 ttcgttgggt ttgaacgcac cagtgccggc tgcgcaccgc gggctcggca tgctctacga
      601 gaaattgggt cgaaccgcgg aagccgtttc tgcttatgaa aaatacattg agcgggcgcc
      661 ggctgcgttt gatcgagaac gaattctaag acgaattgaa accttaagga gaacttagat
      721 gatttcgcac ccctcattcc tcaacctgaa caagttgcga accgccgtcc ttgctgcggc
      781 ggtggtgatt agcgcggtcg tgttgccatc agcggcacgt gcccagtttc tgcacccgaa
      841 gatagtcaag aaagagacca ccattcggaa cgtggttgta ctgccggcaa aagtcgacat
      901 caccagagac agcatgaaag gaccggaagg catggcggct gagtccgaag cggtaagcga
      961 gcgggttgcc aaattggttt ccgacgccct ggcaaacaag caggtcgcaa ctttaagcgg
     1021 gccgatgtca gccacaggcg acgtcgccac cgagcagaaa tacggcgtcg cggatattca
     1081 gtctcgttat gacgacctcc tgccgaagat catgaagaag cgtagcgacg ttaagaaggc
     1141 ccgcttcacc atgggtgatg aagtactgaa cctaaacctc gacaaaaacg ccgacgcaat
     1201 tgtcttcatt cggggcaagg gtcaaaagca gacttccggc aaaacagcgt ttcgtttact
     1261 ggttggaggg gtgccggcgt atttacaggt cactattggg atcgtcgatg cccgaactgg
     1321 tgaagtgttg ctttacacgg acggggtcat aaccggcgat ccaaccgcga acgaaggctc
     1381 gttgcgccat gccataacca agtctctgaa aaagctcccg ggtgcgagtt aggtaaatgc
     1441 cggtacgcac gcctccggcg tgctcagcag gccagcggcc tgcgtaccga taagctgcaa
     1501 gcgggacgct tgcgctccag tcattcactc gcgacagtca gtcccgcttt caaatctgcg
     1561 tgcaggagcc ggtgaaagag atgttcgccg gcttcccgac gaaccgataa acgccccgta
     1621 tcataaaccc gcgactttaa tccgcgctgc accgatgcgc agatgtccag gtcttcctgc
     1681 tgaatccgat cgccgactgc aacgctcgtc agattttgct cccgagcgtt ttcggaaaca
     1741 tccgcgaagt aaaaatcgaa aatgacttca gtgcgatcga ctgagattgg ccgcaccagg
     1801 ttggtgtcca tcacgccggc gtaacagttg atcatgaagt tcggataaat ccagtagtag
     1861 agtgcgcgct cgccggtgcg cgtcgccgcg atgtcggcgg tgtcagtcgt aaccatcgga
     1921 ctactttgga ggcaatgacg ctggccgcac tcgatcgtgt agttgctata gtcgagcaca
     1981 ctgtcgagcc ctttgtgcag atgcggcacg tgataaccgc cgtcgaggta gttatcgaca
     2041 aagactttcc aattgcagtc gatgatgtac ttgcggcgtt cgaaccagtg caggttgcta
     2101 agtcccagca cgcccatttc gttgaccaac tggctgccta gccaattctc gattgattcg
     2161 ttttgcggta cgcacgcctc cggcgtgctc agcaggccag cggcctgcgt accgataagt
     2221 tgtccgccgt tactccgcac caggacccag ttctgccaaa ccgcgacctc aaccggtatc
     2281 aatccattgc ccgtgcgatc gaattcgcag acaccgctga aatcaggcgt gcccttcagc
     2341 tcgccttcga gcgaatacgt ccagccgtga tacggacagc gcatctgcgg cgcgttgccg
     2401 tgcggctcag tcatcaccgc cgccgcgtga tgccggcaca cattgaagaa ggcccggact
     2461 tgattatcgg cgccgcgaac aaccacgatc ggctcgtcgc caatctcagt cgtcacatag
     2521 tcacccgagt tatgaagttg atcgacgcgg gccgctacct gccacgatcg gctgaagacc
     2581 gtgcgctgtt cgagttcgaa gacgcgttcg tctgtgtacc acggtgcggg aatggtggaa
     2641 gcgcgctcga ttggcgtgct cgggtcgtag ctgttgatga ttaagtccag agatttcaaa
     2701 acaactaaaa taacccctta ggttaggaag ggctgtttac gcccgcgccc gtttgcggcg
     2761 tttcgctccg tcaggagcga gatgtttata gtccgcgacc agttaagttg aatacgagct
     2821 cctttaggag cgaaatgtag attctcattc cgctcctaga aggagcttat gagacctttg
     2881 acagaacggg ttctataaac atttggctcc tacggagccg tcatgaaaac ctgaaaaccc
     2941 ggaactcgaa actttcacgt tatcggcgtt gccatcttat gcttcggatt gtagaaaggc
     3001 gtcttggtga ccgtggcggg tactcggtgc cgcaccgctt caaccgtgat ttcgacttca
     3061 actttcgaac cgaccttagc aaagtcgctt ttcagagtgg ccagcgcaat catctttttc
     3121 aatgtcggcg accaggtgga tgacgtcgct ttacccagtt gcgttccgtt gctgtaaaca
     3181 ggcaccgcta cgcgcgacgc gatcggcgag acagccggcg gcaggccaac gttctcgtaa
     3241 attgtctcaa cctcaggcca atgaatttcc aagccgacga tgccccttgg cgtcccgcgc
     3301 ttctgttcgg cgattaaagc cgcccgaccg acaaactttt gcttgtcgag actgaccagc
     3361 cggccgaggc ccatctcaaa cggtgagtat ctctgcggtt cgatcagcgc tttcttgctg
     3421 ctgttgaagt cgatgtcgat gagcagaagc ccggcttcga tgcgcgcgac atccaacgcg
     3481 agcatgccgg tgggtttaat gtcgaaaggc ctgccctgat cgatcagagt gtcccaaacc
     3541 ttcaccgcgt ccgctgccgg cagccagatt tcgtaaccaa gatccccggt atatccggtt
     3601 cgcgaaacct cgaccggcac accggcgatt gttcccctgg tgacgcgaaa gtacttcagg
     3661 ttctcaatat cggcgtccgc tacaacggct ttcaggagcc gacccgacgt cggcccttgc
     3721 agagcgagcg cggcgaccga ttcagaaatg tcttcgatct gaacgtcgag tccggctgcg
     3781 ttctgcgtga accagcgcag acttggatca gcagccgtcc accgatagac gttctcttcg
     3841 agccgggcaa ctgtgccgtc gtcgatcacc ttgccgtgct cgtcgcacca gggcgtgtaa
     3901 atgacctgcc cgacggaaac cttgcgcatg tcgcgcgtga tgattcgatc aaccagacg
//
LOCUS       DATDBY010000192         4379 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1689490, whole genome shotgun sequence.
ACCESSION   DATDBY010000192 DATDBY010000000
VERSION     DATDBY010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4379
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1689490"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..792)
                     /gene="menC"
                     /locus_tag="VIT19_03590"
     CDS             complement(<1..792)
                     /gene="menC"
                     /locus_tag="VIT19_03590"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: protein motif:HMM:TIGR01928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HEY5838093.1"
                     /translation="MLISRIELREINLPLIHFFETSFGRTTTRRIILARVVDSDGAEG
                     WGECTAGEGPFYSEEWAETAWPTLKEFLAPMVVGKQIDKAATVFALMKSVRGHRMAKA
                     AIETACWDLEARRVGQPLWRHLGGVREEIACGVSIGIQESPDALLEKIDREVSAGYQR
                     IKIKIKPGWDLDIVRKVRERFPQIRLSGDANSAYSLNDVDLFRRLDEFDLMMLEQPLA
                     HDDMFDHAKLQKAISTPICLDESIKTPADAEHAIALGACRIINVKL"
     gene            complement(903..>4379)
                     /locus_tag="VIT19_03595"
     CDS             complement(903..>4379)
                     /locus_tag="VIT19_03595"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838094.1"
                     /translation="VGDDPDHLPILQHALMRTWDLWIDDRRNGEPIDLRHYEAVGTMS
                     EALSRHADEAYAELPNDRSRALADRLFKSLTEKGSDNREIRRPTRVSEIAAIAEATPA
                     EIIAVIEPFRQSGRSFLMPPASVTLDENSLIDISHESLIRGWARLRKWVDEEARSANI
                     YRRIADTARLHAEGRAGLWRDPDLALALRWREENRPNATWAQHYHPEFETAMAFIDAS
                     KTAKEAEIAERERARRRKARQTRIVATVFAVLFFIAAGFGGFALYASNRAYAARNEAL
                     TARNEALEEKKRADVARAEAVKEKNNAVESEKRAVASEQTAREEEERAEEAAKVAEEQ
                     RIKAEAASAQARQAQLVAEQRRQQAERSALESLRAAMRARKQSLNDKSNLNTLAERLI
                     DMASPEEAAYWRNYYATALAEIGRSDLSKNESTKVLEVFGDNLNALTNRGYMSLIRFE
                     TDQALKDFERIREIDPQYSLNYLNLGVTQANLKDYAAASNSIQKAIEWYRPGYFDGVF
                     DSEVSDDIKQATHRNVIYADGNEFSAALYYELAAIEAFRGGADFEPKLAAADQHAVRT
                     NPSVEGYLTAMNWAWMQMRKEPKDYGAWAIHAHLWRKAGYDEWARYYYKKFQCEHGEN
                     KDARYTGLARWVDRELTKLPRTSAHIDCSNPPAGETDARTKTFLANELASIGRYREAV
                     ALLDSAIEREPGNVELLLSRARYRQRAAYWAGQFKEEEDQKRFSAGAREDFAKLLKLT
                     EQNPEYKPVVYLWWSFLGPDLGGMTEEERKFFYEKAIELGPANSGAMTGLSDMIANSE
                     PEKAIELLRRSVALDPSAGTYHRLGILQSKAGNHGDALKSINLAIALEGDNPTYYEER
                     ERTEAGLGVSAIERARHLADGYTHIGDRQLKQDKKAEAYQTYQQALRTLSTVANSDKS
                     GAIASDLAVVNSKITRLLDANREKLSGRILSIKEGEGKTREVTIDRGADDGVVAGEEG
                     TLWTIYSKVDDKERKVQKIGTSKILSVGRDSAAVQVTMDDPTGDKLVRVGDMVEVSMR
                     VPPLGDRPNLWGLTKFHIALTSEDGKKVFADYRMLYRDPSAETVSRVLDEIAAEIKST
                     GERFSTIDLMKTVIKKGRFKDKTVLQVMQNATRADVQGMLNDMWQYPATHYGQDVRVG
                     RAFAVWAVGEPD"
BASE COUNT          819 a         1362 c         1170 g         1028 t
ORIGIN      
        1 gagtttcaca ttgatgatgc gacacgcgcc cagggcgatc gcatgttccg catccgccgg
       61 cgtcttgatg gattcatcaa gacagatcgg tgtactaatc gctttctgca acttcgcgtg
      121 atcgaacatg tcatcgtgcg ccaaaggctg ttcaagcatc atcaggtcga attcgtccaa
      181 cctccggaac aggtcaacat cattcagcga ataagccgaa ttcgcgtcac ccgaaaggcg
      241 aatttgcgga aagcgctcac gcaccttacg cacgatatcg aggtcccaac ccggtttgat
      301 cttgattttg attcgctggt accccgccga tacttccctg tcgatttttt ccaacagcgc
      361 gtccggtgac tcctggattc cgatcgaaac tccacaggca atttcttccc ggacaccgcc
      421 gagatgtcgc cagaggggct ggcccacgcg tctcgcttcc aaatcccagc acgcggtttc
      481 gatggcggct ttggccatcc gatgaccgcg cacacttttc atcagagcga aaacggtggc
      541 ggctttatca atctgtttac ccacaaccat gggcgcaaga aactctttca gggtaggcca
      601 ggcagtttcg gcccattctt cggagtagaa agggccttca ccggcggtgc attcgcccca
      661 gccctctgcg ccgtcgctgt cgacaacccg cgcgagaatt attcgtcgcg tggtcgtacg
      721 gccgaaactg gtctcgaaaa agtgaatgag tggaaggttt atttcgcgaa gttcgattcg
      781 ggaaatcagc actgagcgat attagacggg gagttgagct ttgtcatccg actggagcgc
      841 aagcgtcccg cttgcaatgc ttcgcaccag agcaaccgag acggttgcgc tccagtcaac
      901 ctctaatccg gctcgccgac cgcccatacg gcaaacgcgc gtccgactct cacgtcctgg
      961 ccgtaatgcg tcgccggata ctgccacatg tcgttcagca tcccctgcac atcagcgcgc
     1021 gtcgcattct gcatcacctg aagcacagtc ttgtccttaa agcggccctt cttgatcact
     1081 gtcttcatca ggtcgatcgt ggaaaaacgc tcgcccgtgc ttttgatctc agccgcgatc
     1141 tcgtcgagca cgcgactgac ggtttcggca ctggggtccc ggtaaagcat gcgatagtcc
     1201 gcgaacactt tcttcccatc ttcgctggtc agcgcgatgt gaaacttggt caagccccac
     1261 aggttcggtc gatcaccaag cggcggaacc cgcatgctca cttcgaccat atcgccgacg
     1321 cgcaccagtt tgtcgccggt cggatcgtcc atcgttacct gcaccgcggc cgaatcgcgt
     1381 ccgacgctga gaattttgga cgtgccaatc ttctgcacct tgcgctcttt atcgtcgact
     1441 ttgctgtaaa tcgtccacag cgttccttct tcaccggcga ccacgccgtc atcggcgccg
     1501 cggtcgatgg ttacttcgcg ggtctttccc tcaccttctt taatgctcag gatgcgaccg
     1561 ctgagttttt cgcgatttgc gtcgagcaga cgcgtgatct tcgaattgac cacggccagg
     1621 tcgctggcaa tcgcgccgga tttatctgaa ttggcaacgg tcgacaaggt gcggagagct
     1681 tgctgataag tctgataggc ctccgccttc ttgtcctgtt tcaactgccg atcaccgatg
     1741 tgagtgtagc catccgcgag atgccgagcg cgttcgatcg cgctgacgcc caaccctgcc
     1801 tcagtgcgtt cgcgttcttc gtaataggtc ggattgtcac cctcgagcgc aattgcgaga
     1861 ttgatcgact tgagagcgtc gccatgattt ccggctttgc tttggaggat tccgagccgg
     1921 tgataagtac ccgccgaagg atcgagcgcg acgctgcggc gcaacagctc aatcgctttc
     1981 tcgggctcgg aattcgcgat catgtcgctg agccctgtca tcgcacccga atttgccggc
     2041 ccaagttcga tcgccttttc gtaaaaaaac ttccgctctt cctcggtcat cccaccgaga
     2101 tccggaccga gaaaactcca ccaaaggtaa accaccggct tgtattcagg attttgctca
     2161 gtcagcttca gcaacttcgc aaagtcctcg cgcgcgccgg cactgaatcg tttttgatct
     2221 tcttcctctt taaattggcc ggcccaatag gccgcgcgtt gccggtagcg ggcccgggat
     2281 aacaacaact cgacattgcc cggttcacgt tcaatggccg agtccagcaa cgccacggct
     2341 tcccgataac ggccgatcga cgccagttcg ttggcaagga aagtcttggt ccgcgcgtca
     2401 gtctcaccgg caggcggatt cgagcaatcg atgtgcgccg aagtcctcgg cagttttgtg
     2461 agttcccgat cgacccaacg cgctaagccc gtgtaacgag cgtccttatt ttcaccgtgc
     2521 tcacattgga atttcttgta gtagtaacgc gcccactcgt cgtaaccggc tttgcgccag
     2581 aggtgcgcgt gaatcgccca tgcaccgtaa tccttcggct ctttgcgcat ctgcatccat
     2641 gcccagttca tcgccgtcaa atagccttcg accgaaggat tcgtgcgcac cgcatgctga
     2701 tcagccgcgg cgagcttcgg ttcgaagtcc gcgccgccgc gaaacgcctc gatggcggcg
     2761 agttcgtagt aaagcgccgc gctgaattca ttgccgtctg cgtagataac gtttcgatgc
     2821 gtggcttgct tgatgtcgtc cgacacctcg ctgtcaaaca cgccgtcgaa gtagcccggc
     2881 cgataccatt cgattgcttt ctggattgag ttcgacgccg cagcgtagtc cttcaggttc
     2941 gcctgcgtta cgccaaggtt cagatagttg agagagtact gcggatcgat ttcgcgaatt
     3001 cgttcgaagt ctttcagtgc ttgatccgtc tcaaagcgaa tcaggctcat gtacccgcgg
     3061 ttcgtcaaag cattcaggtt gtcgccaaaa acctccagaa ccttggtcga ttcgttcttc
     3121 gaaagatccg accggccaat ttccgccagc gccgtcgcgt aatagttgcg ccagtacgca
     3181 gcttcttccg gtgaagccat gtctatcaaa cgttcggcca gcgtatttaa gttcgacttg
     3241 tcgttcaggc tctgcttgcg cgcccgcatc gcggcccgaa gagactcgag cgcggaccgt
     3301 tcagcctgct gccgcctttg ttctgctaca agctgcgcct gccgggcctg cgcgctggcc
     3361 gcttccgcct tgatgcgctg ttcttcggcc accttcgccg cctcttcggc gcgttcctct
     3421 tcttcccgag cggtctgttc gctcgcgacc gcgcgttttt cgctttctac ggcgttgttc
     3481 ttctctttga cggcttcagc gcgcgcgaca tccgcgcgtt tcttttcttc cagggcctcg
     3541 ttgcgcgcgg tcagggcttc gttgcgcgcc gcgtacgctc tattgctcgc gtaaagagca
     3601 aacccgccga acccggcggc gatgaaaaac aggaccgcga acaccgtcgc gactattcgc
     3661 gtctgacgcg ctttccttct tcgcgcgcgt tcgcgttccg cgatctcagc ttccttagct
     3721 gtcttactgg cgtcgatgaa cgccatcgcc gtttcgaatt ccggatgata gtgctgcgcc
     3781 caggtcgcat tcgggcggtt ctcttcgcgc cagcgcaatg ccaaagccaa atccggatcg
     3841 cgccaaagac cggcgcggcc ttccgcgtga agccgcgctg tgtcggcaat gcgtcgatag
     3901 atgttggcgg aacgagcttc ttcgtccacc cacttgcgca ggcgcgccca gccgcgaatc
     3961 aagctttcgt gtgaaatgtc gatgagggag ttctcatcga gcgtgacgct ggccggcggc
     4021 atcagaaacg aacggcccga ctggcggaaa ggttcaatta ccgcaatgat ttcggccggc
     4081 gtggcttcgg caatcgcagc aatctcgctg acccgagtcg gacgccggat ctcgcgattg
     4141 tccgaccctt tctcagtcag gctcttgaaa agtctatcgg ctaaagcgcg actgcgatcg
     4201 tttggcagct cggcgtacgc ttcatccgcg tgacgcgaca aagcttcgct catcgtgccg
     4261 acggcttcgt aatgacgcag gtcgatcggt tcgccattgc gccgatcgtc gatccacaga
     4321 tcccaagtgc gcatcagcgc gtgctgcagg atcggtaagt gatccggatc gtctccgac
//
LOCUS       DATDBY010000193         2289 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2070889, whole genome shotgun sequence.
ACCESSION   DATDBY010000193 DATDBY010000000
VERSION     DATDBY010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2070889"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..637
                     /locus_tag="VIT19_03600"
     CDS             83..637
                     /locus_tag="VIT19_03600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838095.1"
                     /translation="MKKLIIAAGLITALALAAFGTTGGLPVSFAGSWTLDKSKSTGLS
                     QRMQNAEKVTCVITQDDNTISVEWKFEGTQPAAAGAGGGGGMGGGRGPAGPQSYNLDG
                     KEATSEAGGLVGGTSTMKATWSDATKTLELMSVRAGNVNGQDFKATTTDKMSLSADGK
                     VLTITRHSESPRGTQDSTLVFNKQ"
     gene            787..1806
                     /locus_tag="VIT19_03605"
     CDS             787..1806
                     /locus_tag="VIT19_03605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838096.1"
                     /translation="MPTRFRWSLVSDERLLDTRICDLPIKIKGSFIEPHIKRLYSELN
                     DRGIRYKPHVWLSAEWFTPDGVPGFAIPFYLAHPRLMKLERKFMREVEGGTDVECMRI
                     LRHEAGHAIDNAFRLHFKRQWIRTFGSFTQKYPPSYKPKPNSRRYVLNLDAWYAQAHP
                     AEDFAETFAVWLQPRSDWRRRYRGWPAVRKLEYVDDLVNEIAGTRPKNRVRKKVETLP
                     EIRITLRELYDRKRKKYAFEWPAYLDNDLRRIFSSEPRHRARETAASFVRRVAPEIQQ
                     LVSEGTGVHGYAIDHVLELMIERAAQLKLRAIGGDEKLKRHLLIMLTVQTMNVVHSGY
                     YRIAL"
     gene            1852..>2289
                     /locus_tag="VIT19_03610"
     CDS             1852..>2289
                     /locus_tag="VIT19_03610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838097.1"
                     /translation="MNKNGDNEKAASKPPHSKAAAKNGDTVKKLRVMVLCHEDLVPPD
                     SVDDLTPKEIAPFKTEWDVISTLKKMGHEVLPVGVYNNLGVIGNGLLEFKPHIAFNLL
                     EEFHGYPLYDQHVVSYLELMNQPYTGCNPRGLTISHDKALAKMV"
BASE COUNT          533 a          631 c          664 g          461 t
ORIGIN      
        1 atgctcgtaa ccatttttcg ccggggcgcg tcttaacggc agacaaccgg gactaacgat
       61 tcaaaaataa cggaggattc tgatgaaaaa gttaataatt gcggcagggc tcataaccgc
      121 cctggcgttg gccgctttcg gaacgacggg cggactgccg gtcagctttg ccggcagttg
      181 gacccttgat aaatctaaga gcacgggact cagtcagcgg atgcaaaacg ctgaaaaagt
      241 cacgtgtgtg atcactcagg acgacaacac gatttctgtc gaatggaaat ttgagggcac
      301 tcagcccgcg gccgccggtg cgggtggcgg tggcggcatg ggcggcggac gcggtccggc
      361 cggtccgcag agctacaatc tcgatggcaa agaagcgact tccgaagccg ggggcctggt
      421 gggtggaacg agcacgatga aagcgacctg gtcagacgcg accaagacgc ttgagttgat
      481 gtccgtgcgc gccggtaacg tcaacggcca ggacttcaaa gcgacgacta cggacaagat
      541 gtctctgtcg gccgacggca aagtgctgac gatcactcgt cacagcgaat cgccgcgcgg
      601 cacgcaggat tcgactctgg ttttcaacaa acagtaactt ctatttggag tgcggtggca
      661 agcgaaggcg cgacaccgct ttggatgtct tcccggcaat ccaaagcgcc gtcgccgctt
      721 cgctcagccg gcgcactcca aatacctctc tagcctcaac ttccaatcgc agttacaatc
      781 tgacgcgtgc cgacgcgctt ccgatggagc ctggtttcag atgaacggct tttggatacg
      841 cgcatctgcg acctgccgat aaagatcaaa ggttcgttca ttgaacctca tatcaaacgc
      901 ctttacagcg agctgaacga tcgcggcata cgttacaagc cgcacgtgtg gctctcggcc
      961 gaatggttca cgcccgacgg cgtgcccggg tttgcgattc cgttttatct cgcgcatccg
     1021 cggctgatga agctagaacg gaagtttatg cgcgaagtcg aaggcggcac cgacgtcgaa
     1081 tgcatgcgca tcctgcgtca cgaagcaggg cacgcaatcg ataacgcgtt tcggctgcat
     1141 ttcaagcgcc agtggattcg cacctttgga tcgttcaccc agaaatatcc accgtcatac
     1201 aaacctaagc cgaatagccg ccgttacgtt ctgaatcttg atgcgtggta cgcgcaggcc
     1261 catcccgccg aagattttgc cgagacgttc gcggtttggt tacagccgcg ctcggattgg
     1321 cggcgtcggt atcgcggctg gccggcggtg cgcaagcttg aatacgtcga tgatctcgtg
     1381 aacgagattg ccggcacgcg accaaagaat cgggtgcgaa aaaaagttga aacgctgccg
     1441 gagattcgca tcacgctgcg cgagctttac gaccgcaagc gaaagaagta cgcttttgaa
     1501 tggccggcct atctcgacaa cgacttgcgg cgaatttttt cgagcgagcc acgacatcgc
     1561 gcccgcgaga cggccgcgag tttcgtccgc cgagtggcgc cggaaattca gcagttggtt
     1621 tcggaaggaa cgggcgtgca cggctacgcc atcgatcatg tgctggagtt aatgattgaa
     1681 cgggccgcgc aattgaagct gcgcgccatc ggcggcgacg aaaaactgaa acgtcacttg
     1741 ctgatcatgc tgacggtaca aacaatgaac gtggtgcatt cgggttatta ccggattgcg
     1801 ctctagattt tgaagtgctt ccccctctcc ccgagggaga gggaacctgg aatgaataag
     1861 aacggcgaca atgaaaaagc ggcgtcgaag ccgccgcact ccaaagccgc cgctaagaac
     1921 ggcgacacgg tcaagaaact gcgcgtgatg gttctgtgtc acgaagacct cgtgccgccg
     1981 gattccgtcg acgacctgac gcctaaagaa attgcgccct tcaaaactga gtgggacgtg
     2041 atttcgacgc tgaagaagat gggtcatgaa gttctgccgg tcggcgttta caacaacctc
     2101 ggcgttatcg gtaacgggct cctcgaattc aaaccgcaca ttgcgttcaa tttgttggaa
     2161 gagtttcacg gatatcccct ctacgatcag catgtcgtca gctatctcga gctgatgaat
     2221 cagccctaca ccggttgcaa tccgcgcggc ctgacgattt cacacgacaa ggccctggcc
     2281 aaaatggtg
//
LOCUS       DATDBY010000194        10624 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1455311, whole genome shotgun sequence.
ACCESSION   DATDBY010000194 DATDBY010000000
VERSION     DATDBY010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 10624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10624
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1455311"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..290)
                     /locus_tag="VIT19_03615"
     CDS             complement(<1..290)
                     /locus_tag="VIT19_03615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838098.1"
                     /translation="MFACIYSRTAKSPENIVKASVLTDLAFSFSPLIEQTSDDTVVLD
                     VSGQDLLFGEAESPVPSPTDLGSARNVADEIVRRGEQLNLKIQVAVAANPDAA"
     gene            401..2848
                     /locus_tag="VIT19_03620"
     CDS             401..2848
                     /locus_tag="VIT19_03620"
                     /inference="COORDINATES: protein motif:HMM:NF037959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEY5838099.1"
                     /translation="MTAIDTAETQPTEIAGYSTTALRLVALCFVLSGATGLIYEVLWA
                     RMLGLVFGATTVAISTVLAAFMGGLAIGSALAGRIGAKIARPIRAYGILEIGIAIYAL
                     AVPFIFALVDDLYFVLWNKFSPSFYAFSLLRFLLSGLLLLIPTTLMGATLPVLSAALL
                     RSQKTTTTSITKLYTRNLVGAICGTIAAGFFLLPALGVRRTIYVASVINICIGIAAII
                     AEWRFGRTLAEPSGQRAINKSVRSDEAIKIDQPKFWLFCAFVSGFVTFSTQVAWTRVL
                     TMIVGSSTYAFSITIALFLLSLSLGAYVIARLPLRANPRRVLMKFELVTAFSLVLSIL
                     VINKMPSLLIAMGLKLNVSTWLGLLALQLALITLLIPLPAFLMGATMPLVLRWADGHG
                     QRSVQLVGWSYAANTVGAIAGALIAGFVLIPRISTRFTIMFAVALCLVVAGMAYEPKL
                     GSHDRDVRKALAAGATVALILLTFLISPRMNLEGLSIGAYDSLVRVLAKSRGATADSA
                     RERKERGEHRLLLYEEGPTATVSVRKDWDVISMSINGRTNASDREDMPTQVMLGQLAL
                     LLSPRPKRALMVGFASGISAGSMLQSPIESIECVELEPATVGASRFFEHVNNRPLNDP
                     RLRLIIDDARSYLRVTSNRYDMIVSEPNHPWVPGVANLFTKEFFALGRDRLNEDGLFV
                     QWVQIYQLSTDSLRSVLATFQQVFPHVLVFRVEGANKGKDLLLVGSKKPSTLDRLSLG
                     FNDARMSAELARVNIKSEADVRAWFVCDESRLAPAVSGAIINTDDNMHIEMTAPKEAF
                     RPLLQSNAAWVESLIEK"
     gene            complement(2855..3658)
                     /locus_tag="VIT19_03625"
     CDS             complement(2855..3658)
                     /locus_tag="VIT19_03625"
                     /inference="COORDINATES: protein motif:HMM:NF012381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838100.1"
                     /translation="MKVAVTRKEIESALHDRFGGVFERHERVLPETLPTDVVEIDNAL
                     GGFPRGAITEIHGAPSSGRTSLLLSALAAATAREETCALIDCSDTFDLLSAAKAGIDF
                     KRLLWVRCQNNLERAFKAVDLVTHAGGFGFVVLNLCDVPAKAVRRIVSSWWFRFRRAI
                     ENTPTALLIFTSVASVRSSAAVVLELRNEVTEWRKTVSFVDNEQIYDDKRKITRGLSL
                     VSPHHSRGFDVLSLSHAQFIQGLRVRVNRVKPVEQPNSVNFKPQLHISC"
     gene            3698..4342
                     /locus_tag="VIT19_03630"
     CDS             3698..4342
                     /locus_tag="VIT19_03630"
                     /inference="COORDINATES: protein motif:HMM:TIGR03914.1"
                     /note="This protein belongs to the uracil DNA glycosylase
                     superfamily, members of which act in excision repair of
                     DNA. However, it belongs more specifically to UdgX branch,
                     whose founding member was found to bind uracil in DNA
                     (where it does not belong), without cleaving it, appears
                     to promote DNA repair by a pathway involving RecA, rather
                     than base excision; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UdgX family uracil-DNA binding protein"
                     /protein_id="HEY5838101.1"
                     /translation="MARDKSETSAAAFFPERKSLKAFREAAADCKGCDLWERGTQTVF
                     GEGARHAEVMFIGEQPGNEEDLTGHPFVGLAGRLFNDALEEAGIDRRKTYVTNVVKHF
                     KWEPRGKRRIHKKPNAREISACRPWLEAEINLVKPNVIVCLGATAAQALLGSKFKVSK
                     QRGKFIESTLAPYIMATVHPSSILRAPDDETRHVEKRRFIDDLKRVAGALSKTR"
     gene            complement(4405..5016)
                     /gene="lexA"
                     /locus_tag="VIT19_03635"
     CDS             complement(4405..5016)
                     /gene="lexA"
                     /locus_tag="VIT19_03635"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEY5838102.1"
                     /translation="MPITARQRRILDYISNYFEANQEPPTMVEIGGQFGMTSLASVHN
                     VLSILEREGFIRRIPNVSRGIELVKQETDESNFEIPLLGIVAAGAPIEAVLNQETVCI
                     PRDMMKKGRMFALRVRGDSMIDEQIREDDFIILQSQQTADNGQTVVALIDGSDATVKR
                     FYSGKNHIRLEAANPRYKPIIVRPPERLQIQGIVVGVIRKYQQ"
     gene            5284..7062
                     /gene="pilB"
                     /locus_tag="VIT19_03640"
     CDS             5284..7062
                     /gene="pilB"
                     /locus_tag="VIT19_03640"
                     /inference="COORDINATES: protein motif:HMM:TIGR02538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HEY5838103.1"
                     /translation="MSAKLGEILVRENLISPQHLRQALDYQREHGGRLGFNLVKLGLV
                     SDDTITAILSRQYGIPSVNLELFDIDDSVLRLIPQEVAQKYSVLPLSRVGATLTLAMV
                     DPTNVFAMDDIKFMTGLNVEPVVVAEASVQHAISKYYSTTREIELASVTAEVAPNGNG
                     FSDADLVSLDTLDFDHSSMTEEVDVLEDNEEIDISSLARMSEDAPVVRLVNVLLVDAL
                     RRGASDIHVEPYEKELRIRFRIDGVLYDVMHPPLKMRDALISRIKIMSKLDISEKRLP
                     QDGRIKIRVKVESRSRELDFRVSTLPTLFGEKVVLRLLDKEKLMLDMTNLGFEPESLV
                     KFQRNISKPYGMVLVTGPTGSGKTNTLYSALQSLNKVDTNIMTAEDPVEFNLPGINQV
                     QMKEQIGLNFAAALRSFLRQDPNIILVGEIRDFETAEIAIKAALTGHLVLSTLHTNDA
                     PSTISRLMNMGIEPFLVATSVNLIQAQRLIRRICKDCKKEHPTPIEALVEIGFSPEEA
                     KTVKTYKGRGCPTCNETGYKGRIGLYEVMEITDEIRELILIGASALELRKKSIEDGMI
                     TLRESGLQKIKNGTTTVEEVVRETVA"
     gene            7076..7861
                     /locus_tag="VIT19_03645"
     CDS             7076..7861
                     /locus_tag="VIT19_03645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838104.1"
                     /translation="MLRRILIGLCLLATLVVMIPLVSSTAHNLRAQFSSASQRRRHSR
                     AWWRRHRAMLRRRQAMLARRRAMRAVMLARRNGVAPTEPKVVGNHASIPTTVTLMPTA
                     PAMTGNAALPNGWAPVASTGAGSSFRIAPAAGPEASATLTLVAPTTGSQPFGREQKKM
                     VGGASYTELRRSVIDRMVSAGGWVVNDRQREISGRRVFEVIAQTPSSNGKPDQVWNFY
                     FAEIDGKVYALTTRTAGNNDKVAADAEKFISAFSPAELQAKKK"
     gene            7890..9053
                     /locus_tag="VIT19_03650"
     CDS             7890..9053
                     /locus_tag="VIT19_03650"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEY5838105.1"
                     /translation="MENPPQISLSELLRKLSELGGSDLHVTTGTPPLVRVHGTIRPLD
                     GYRPLTSSETKQLAYSVLTDAQKHRFEENLELDFSFGVKGLSRFRANLFNQRGAVGAV
                     FRAIPYEIKSFEDLGLPPVVQDLCKKPRGLILVTGPTGSGKSTTLAAMIDKINRERHE
                     HILTIEDPIEFLHNHKGCIVNQREVNADTKGFPEALRTALRQDPDVVLVGEMRDLETI
                     ESALRIAETGHLTFATLHTNSAASTINRIIDVFPAMQQAQVRAQLSLTLEGILCQSLL
                     PRADNAGRAMAMEILIPNSAIRNLIREDKVHQIYSMMQTGQDIHGMQTFNQSLATLFH
                     KRSISKDMAFQASSNSNELRDLIDRGSGLNTGNGSMRPPVATGYNAQRPIQRR"
     gene            9088..10317
                     /locus_tag="VIT19_03655"
     CDS             9088..10317
                     /locus_tag="VIT19_03655"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEY5838106.1"
                     /translation="MPTYVFKGQNRLNEIVSGERVADNRESLRQALRREQITLMSVKE
                     KGREIGIPKLAGRKSVKSRDLAIFTRQFSVMIDAGLPLVQCLDILSQQQQNKYFQQVL
                     GQVRQDVEEGSTLAAAMTRHPKVFDQLYSNMVEAGETGGILDLILQRLSTFIEKIVKL
                     KRDVVSALIYPVAVILLAIIAIAVIMVVVIPQFQNIFLGLLGPGEPLPLPTRIVVGLS
                     NFLAGWGGLCILAGIIATVVGLKLYYKTPKGRKIIDTILLKVPILGPIFLKIAIARFS
                     RTLSTLLSSGVPILQSLDITARTAGNVIVENAIIQIRDGVEQGKSFVEPLRASELFPH
                     MVAQMVGIGEQTGALDSMLGKIADFYEQEVDTAIANLLTLMEPALIGFLGVTIGGIVI
                     AMYMPMFSLIGKLSSGH"
     gene            complement(10333..>10624)
                     /locus_tag="VIT19_03660"
     CDS             complement(10333..>10624)
                     /locus_tag="VIT19_03660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838107.1"
                     /translation="VVDANLRAAESADAVGKVINVANGRQVTLNELLEIMKNVTGKST
                     AAARYEPLRVGDVRHSLADISLARSLLGYEPRVGLEEGLRLTFDWWQKSGGQ"
BASE COUNT         2411 a         2958 c         2837 g         2418 t
ORIGIN      
        1 gccgcatccg gattggctgc gacggcgacc tggatcttga gattcaattg ctccccacgt
       61 cggacaattt catcggcaac atttcgcgct gaacccaggt cggtcggcga cgggaccgga
      121 ctttccgcct caccaaataa caagtcctga cctgaaacat ccaacaccac cgtgtcgtca
      181 ctcgtttgtt caatcaaggg cgaaaaacta aacgccaagt cggtaagcac cgatgccttg
      241 acgatatttt caggcgattt agcagttcgg ctgtaaatac aggcaaacat tccttacact
      301 cgtcggatta tcagaattta ttggcgaagc gaatattacc gaatatatcc gaatatggca
      361 aaagggcgac gctttcttcc ccaatgctga ggaatcttaa atgactgcca tcgataccgc
      421 ggagacccaa cccactgaaa ttgcaggcta ttccaccacc gcgctaagac ttgttgcact
      481 ttgtttcgta ctttccggtg ctaccggttt gatttatgaa gttctttggg cacgcatgtt
      541 gggcctggtg tttggcgcaa ctacggtggc gattagcact gtcctggctg cgttcatggg
      601 aggcttggcc atcggcagtg cgctagctgg acgaatcggc gccaaaatcg cacgcccaat
      661 ccgcgcttac ggcatattgg aaattggaat cgcgatttac gcgctcgcgg ttcccttcat
      721 cttcgctctc gttgacgacc tgtattttgt tctttggaac aagttcagtc cgagcttcta
      781 tgcgtttagc cttcttcggt tccttctttc cggcctgctg ctactcattc ccacaacgtt
      841 aatgggcgct accctgcccg tactttcggc agcattgctt cgctcgcaaa aaacaacgac
      901 gacgtctatc acaaagcttt acacgcgaaa cctcgtcggt gcgatttgtg gcactatcgc
      961 ggctggattt tttctcttgc cggcactagg cgttcgccgg actatctacg tcgcctcagt
     1021 catcaatatc tgcatcggaa tcgcggcaat aattgcagag tggagattcg gaagaacgtt
     1081 agctgaaccc agcggacaac gcgcaatcaa caagtcagtt cgatcagacg aagcgattaa
     1141 gatcgatcag ccaaagttct ggctcttctg tgcctttgtt tccggttttg tgactttcag
     1201 cacgcaggtg gcgtggactc gtgtactcac aatgatcgtt ggttccagta cctacgcgtt
     1261 cagcatcacc attgcgctat ttttgctgag cctgtccctg ggcgcctacg tcattgcgcg
     1321 gcttccactc agggcaaacc cgcgccgggt gctgatgaaa tttgagctag tcacggcctt
     1381 tagcctggtg ctcagtattc tcgtcatcaa caaaatgccg tcactgctga tagcaatggg
     1441 tctaaaactc aacgtcagca catggctcgg actgctcgcg ttgcagctcg ccttaatcac
     1501 gctgctcatt cccctgccgg cgtttctcat gggagccacc atgccgctgg tgcttcgttg
     1561 ggccgatggt cacggccaga gatcagttca actcgtcggt tggagctacg ccgccaacac
     1621 cgtcggcgcc attgccggcg ctttgattgc aggctttgtg ctgattccaa gaataagcac
     1681 tcgcttcacg atcatgtttg cggtcgcgct ttgtctggtg gttgcgggta tggcttacga
     1741 gccaaagctc ggatcgcacg atcgcgacgt gaggaaagcg ctggccgcag gcgcaactgt
     1801 tgccttaatc ctcctgacgt ttctcatctc tccgcggatg aatttggaag gtctctcaat
     1861 tggcgcctat gacagtctgg tgcgcgtgct cgcaaaatcg cgcggcgcca cggccgatag
     1921 cgcccgcgaa cgaaaggaac gtggcgagca ccggttgttg ctgtatgagg aaggtcctac
     1981 cgccaccgtg tcagtgcgca aagattggga tgtgatttcg atgtcgatta acggccggac
     2041 caacgcctcg gatcgagaag acatgccaac ccaagtcatg ttaggtcaat tggcgttact
     2101 tctgtcaccc aggccgaaaa gagctttgat ggtcggattt gcatccggta ttagcgcggg
     2161 ctcgatgctg caatcgccga tcgagtcgat tgaatgcgtg gaactggaac ccgcgacggt
     2221 cggtgcctca cgttttttcg agcacgtaaa taatcgcccg cttaatgatc cgcggttgcg
     2281 tctgattatt gatgacgcgc gcagttacct gcgggtcacg tcgaatcgct atgacatgat
     2341 cgttagcgaa ccgaaccacc cctgggttcc cggagtcgcc aacttgttta cgaaagaatt
     2401 ttttgcgttg ggccgggata ggcttaacga agatggactt ttcgttcagt gggtgcagat
     2461 ttaccagctt tcgactgaca gtttgcgatc ggtgttggcg actttccagc aagtattccc
     2521 ccacgtgctg gtctttaggg tcgagggggc gaacaaggga aaagacctgc tgctggtagg
     2581 gagtaagaag ccgagcacac tggatcgatt gtcactcgga tttaacgacg cgcgcatgtc
     2641 tgccgagctg gcgcgcgtaa acataaagag cgaagccgat gtgagagcgt ggtttgtgtg
     2701 tgacgaatcg cgattggcac ccgctgtctc gggcgcgatt atcaatactg acgataacat
     2761 gcatatcgaa atgacggccc ccaaagaggc ctttcgaccg ttgttgcaat caaatgcggc
     2821 ctgggttgag tcgctcatcg aaaagtgacc cggttcaaca cgaaatgtga agttgcggtt
     2881 tgaagttaac tgaatttggc tgctcgacag gtttcacgcg atttactcgc acgcgtaatc
     2941 cctgaatgaa ctgcgcgtgg ctcaaagata aaacgtcaaa ccctctcgaa tggtggggtg
     3001 aaaccagtga aaggccgcgc gtgatttttc ttttgtcgtc atatatttgc tcgttatcta
     3061 caaatgacac cgttttccgc cactcagtca cttcgtttct caactccaac acaaccgcag
     3121 cagacgaacg tacggacgcg accgaagtaa atataagcag cgcggtggga gtattctcaa
     3181 tcgcccgacg aaaccgaaac caccaggacg aaacgatccg gcgcacggct ttcgccggta
     3241 catcgcacag attgaggacg acaaagccaa accctccggc atgagttacc agatccacag
     3301 ctttaaatgc gcgctcaaga ttattttgac aacggaccca aagcagccgc ttgaaatcga
     3361 tgccggcctt tgccgcggat aaaagatcga acgtgtcgct gcaatcaatc aaagcgcagg
     3421 tttcttcgcg cgcagttgct gccgctagcg ccgaaagcaa caggctggtc cgcccagacg
     3481 acggcgcccc gtgaatctct gtgattgctc cccgcgggaa tccgcctaat gcgttgtcga
     3541 tttcgacaac atcggtcggc agtgtctctg gcagcactcg ttcgtgacgt tcaaaaacac
     3601 ctccgaaacg atcgtggagc gccgactcaa tttctttcct ggtaaccgca actttcatgt
     3661 ttgcactgac tgtaactgcg tcgcaaaata aactttcatg gccagggaca aatccgaaac
     3721 ctcagccgca gccttttttc cggagcggaa aagcttgaaa gctttccgcg aggccgctgc
     3781 cgactgcaaa ggctgtgacc tttgggaacg cggcacgcaa actgtattcg gcgaaggcgc
     3841 ccgccatgcc gaagtcatgt tcatcggcga acaacctgga aacgaggaag acctcacggg
     3901 ccatccgttt gttggcctcg ccggccgctt gtttaacgac gccttagagg aagccggcat
     3961 cgatcgccgc aaaacttacg ttactaatgt cgtcaaacat ttcaaatggg aaccccgcgg
     4021 caagcgccgc attcacaaaa aaccgaatgc gcgcgagatc tctgcgtgcc gcccctggct
     4081 ggaggccgaa atcaatttgg ttaaaccaaa cgtgatcgtt tgtctcggcg cgaccgcagc
     4141 tcaggcactg ctcggatcca agttcaaagt cagcaagcaa cgcggtaaat tcatcgagtc
     4201 aacactggcg ccttacatca tggcgacagt tcacccctct tcaatcctac gcgcgcctga
     4261 cgatgaaact cgtcacgttg agaagcgacg attcatagac gatctcaaac gcgtcgccgg
     4321 cgctctctca aagaccaggt aatgttggta cgcacgcctc cggcgtgcag cacgcgggga
     4381 cgcgtgcgta ccgcacatta tggtttattg ctgatatttt cgaatcacgc ctaccacgat
     4441 tccttgaatc tgtagtcgct ccggggggcg aactataatt ggtttgtatc gcggatttgc
     4501 agcttcaagc cgtatatggt ttttaccact ataaaatcgc ttgacggttg cgtcgctccc
     4561 atcaatcaat gccaccacag tctggccatt gtcagcagtt tgctgcgact gcaagataat
     4621 gaaatcgtct tcgcgaatct gttcgtcaat catcgagtcg ccgcgcacac gtaaggcgaa
     4681 catgcgaccc tttttcatca tgtcgcgcgg aatgcaaacc gtttcctgat taagtactgc
     4741 ttctataggc gcgccggcgg cgacgatgcc cagcaaaggt atctcgaaat tactttcgtc
     4801 ggtttcctgc ttaaccagtt cgattccgcg gctcacgttc ggaatcctgc gaatgaagcc
     4861 ttcgcgctcg agaatcgaca aaacgttatg gacgctcgcc aacgacgtca tcccgaattg
     4921 ccctccgatc tcgaccatcg tgggtggctc ctgattcgcc tcaaagtagt tcgagatgta
     4981 atcgagtatt cgtcgctggc gggctgtgat aggcatcgtg cccctcctgt cgcttgaatg
     5041 aacgcgaaca ttgtcgaata ttgacgaata tttgtccagc tattttcggc tatccctatt
     5101 gaacggattc gaggtctcgg gctgtcccat gagaaactcg ttgacagccc tactgttgaa
     5161 cgctaagatt gccattgcca acggtgttta gcatcgacgg catggcatct ctgccctaac
     5221 ctgcgccctt cttcgggttc ggaaactcac taatttcagt agccctagtc aaaaagcacc
     5281 aaaatgtcag ccaaactcgg cgaaattctc gtccgtgaga atctgatcag tccccagcac
     5341 ctccggcagg cactcgatta ccagcgagag catggcgggc ggttgggctt caatcttgtg
     5401 aagctcgggc tggtttcaga cgacaccatc acggccattc tgtcgcgaca atacggcatc
     5461 ccgtcggtca atctcgaatt gttcgatatc gacgactcag tcctccggct gattcctcag
     5521 gaagtcgcgc aaaagtattc cgttctgcct ttgtcccgcg tgggtgccac tctcaccctg
     5581 gccatggtcg atccgaccaa tgtcttcgcg atggacgaca tcaagttcat gaccggattg
     5641 aacgttgagc cggtggttgt cgctgaagca agtgtgcagc acgcaatctc gaagtattac
     5701 agcacgacgc gtgaaatcga gctggcctct gtaacggccg aagtggcgcc gaatggaaat
     5761 ggcttttcgg atgccgacct ggtttctttg gatactctcg atttcgacca cagttcaatg
     5821 acggaagaag ttgacgtcct tgaagataac gaagagatag atatttcaag tctcgcccgc
     5881 atgagcgagg acgcaccggt cgttcgtctc gtgaacgtcc tgctcgtcga tgccctgcgc
     5941 cgcggcgcgt cggacattca cgttgagcct tacgaaaaag aacttcgcat acgcttccgt
     6001 atcgacggtg tgctgtacga cgtgatgcat ccgcctttga agatgcgtga tgccctcatc
     6061 tcgcgtatca agatcatgtc caagctggac atctcggaaa agcgactccc gcaggatggc
     6121 cgcatcaaga ttcgcgtaaa ggtcgagtcg cgttcgcggg aactcgattt tcgcgtttcg
     6181 acgcttccta cattgttcgg cgaaaaagtc gtgcttcgcc tgctcgataa agagaagctg
     6241 atgctcgaca tgacgaacct cgggtttgag ccggaatcgc tcgtcaaatt ccagcgaaat
     6301 atttcaaagc cgtacggcat ggtgctggtg accggaccaa cgggaagcgg aaaaacaaac
     6361 actctgtatt cggctctgca atcgctgaac aaggtcgaca cgaacatcat gacggcggaa
     6421 gaccccgtcg agttcaatct gccgggcatt aaccaggtgc agatgaaaga gcagattggg
     6481 ctcaacttcg ccgccgcgct tcgttcgttc ctgcggcagg atccaaacat catcctcgtc
     6541 ggcgaaatcc gtgactttga aacggctgag atcgcgatca aggccgcgct cactggtcac
     6601 ttggtgctct caactcttca caccaacgat gctccctcga ctatctcccg cctcatgaac
     6661 atgggtatcg aaccattcct cgtcgccacc agcgtcaatc ttatccaggc gcagagactc
     6721 attcgcagaa tctgcaaaga ctgcaagaaa gaacatccca caccaattga agcgctcgtg
     6781 gaaatcggct tctcgcctga agaagccaag acggtgaaaa cgtacaaagg ccgcggttgc
     6841 ccgacttgta acgaaaccgg gtacaaaggc cgcatcggtt tgtacgaagt aatggagatt
     6901 accgacgaaa tcagagagct gattttgatc ggcgcttccg cgcttgaatt gcgcaagaaa
     6961 tccattgagg acggaatgat tacgcttcgc gaatccggcc ttcaaaagat caagaatggc
     7021 acgaccacgg ttgaagaggt tgtacgcgag accgtggcgt aaaaggagta ggcacatgtt
     7081 acgtcgcata ttaattggtt tgtgtctgtt ggcaacgctg gttgtgatga tccctttggt
     7141 cagctcaacc gcgcataatc ttcgcgcgca gttttcctct gcgtcacaac gacgacggca
     7201 ttcacgtgcg tggtggcgcc gccatcgcgc aatgttgcgg cgtcggcagg caatgctggc
     7261 tcggcgacgc gcgatgcgcg cagtgatgct ggcccggcga aatggagtag caccaaccga
     7321 gcctaaggtc gtgggaaacc acgcgagtat tccgacgacc gtgacgctga tgccaaccgc
     7381 gcccgcgatg accggcaacg ccgcgctgcc gaatgggtgg gcgccggtag cttcaactgg
     7441 tgcgggttcg agttttcgca tcgctccagc ggctgggcct gaggcgagcg caacattaac
     7501 cctggtcgca ccgacaacgg gcagtcagcc ctttggccgc gagcaaaaga aaatggtcgg
     7561 tggggcgtca tacaccgaac tcagacgaag tgtcatcgac cgaatggtca gcgccggcgg
     7621 ctgggtcgta aacgatcgtc agcgcgagat ttcgggtcgt cgcgtgtttg aggtaatcgc
     7681 gcaaacgcct tcgtccaacg ggaaacccga ccaagtttgg aacttttact ttgcagaaat
     7741 tgacggcaag gtttacgcgt tgacgacgcg caccgccggc aacaacgaca aggtcgccgc
     7801 agacgctgag aagttcatca gcgcgttctc gccggccgaa cttcaagcca aaaagaaata
     7861 ggcgaacttc aaaaaggaag acaaacccca tggaaaatcc accgcaaatc tcactctctg
     7921 agctgttgcg caaactgtct gaactgggcg gttcggactt gcacgtcacc actggcacgc
     7981 cgccattggt gcgcgttcac ggaaccatcc gccccctgga cggttaccgg ccgctgacct
     8041 cgtccgagac gaagcagctc gcctactcag tgcttaccga tgcgcagaag caccggttcg
     8101 aagagaacct cgagctggat tttagctttg gcgtcaaagg cctctcgcgg ttccgcgcta
     8161 atctattcaa tcagcgtggc gccgtgggcg ctgtcttccg tgctattccg tacgagatca
     8221 aatcgtttga ggacctcggg ctaccgccag tcgtccagga tctttgcaag aagccacgcg
     8281 gtttgatcct ggtgacaggg cccaccggct ctggcaaatc gacgacgctc gcggcgatga
     8341 tcgacaagat caatcgcgaa cgtcacgagc acattctcac catcgaagat ccgatcgagt
     8401 ttctccacaa ccataagggt tgcatcgtca accagcgcga ggttaatgcc gacacaaagg
     8461 gttttccaga agcgctgcga accgcgttgc gtcaggatcc tgacgtggtg ctggtcggtg
     8521 aaatgcgcga tctcgagacg attgaatcag cactgagaat cgcggaaacg ggtcacttaa
     8581 catttgcgac cctgcatacg aattccgcgg cctcgacgat caaccgcatc atcgacgtgt
     8641 ttccggcaat gcagcaggcg caggttcgag cccagctgtc gctgacgctt gaaggcattc
     8701 tttgtcagtc gctgctgccg cgtgccgata acgccggccg ggcgatggcg atggaaattc
     8761 tgattcccaa ctcggcaatc agaaacctga ttcgcgagga taaggtccac caaatctatt
     8821 cgatgatgca gacaggtcag gacattcacg ggatgcagac cttcaaccag agcctcgcca
     8881 ctctatttca caaacgctcc atctcgaagg acatggcttt ccaggcctcg tcgaactcga
     8941 acgagctacg cgacctgatc gaccgaggct cgggattgaa caccggcaat ggctcaatga
     9001 ggccacctgt cgctacgggc tacaacgccc agcgtcctat ccaacggcga taacgaataa
     9061 cgaccaccca gaacggagca ttaggaaatg ccaacttacg ttttcaaagg ccaaaaccgg
     9121 ctgaacgaga ttgtttctgg cgagcgcgtg gcggacaacc gcgagtcgct gcgccaggcg
     9181 ctgcgacgcg agcaaatcac gctcatgtcc gtgaaagaaa agggccgcga aatcggcatt
     9241 cccaaactgg ccggcaggaa gagcgtgaag tcgagagatc tcgcaatctt cacgcggcaa
     9301 ttctctgtga tgattgacgc gggtctgccg ctcgttcagt gtctcgacat tctgtctcag
     9361 cagcagcaga acaaatattt tcagcaggtg ttgggccagg ttcgccagga cgtcgaggaa
     9421 ggttcgacat tggcggccgc gatgactcgc catccgaaag tgttcgatca gctttactcg
     9481 aacatggtcg aagcgggcga gacgggcggt attctggatc taattcttca gcgcctttcg
     9541 accttcatcg aaaagatcgt gaagttaaag cgcgacgtcg tttctgcgct tatctatccc
     9601 gtcgccgtga ttctgctggc aataatcgcc atcgccgtca tcatggtcgt ggtaattcca
     9661 caattccaaa atatcttcct cggcctgtta ggtccgggag agccgctgcc gctgcccacg
     9721 cgaatcgtag tcggcctcag taacttcctc gcgggttggg gcgggttgtg catcctcgcc
     9781 gggataatcg cgacggtggt tggactgaag ctctactaca agacgccgaa ggggcggaag
     9841 atcatcgaca ccattctctt gaaagtaccg attctgggac caatctttct aaagatcgcg
     9901 atcgcccgct tttcgcggac gctgtcgact ctgctttctt ccggtgttcc gattctgcaa
     9961 tcgctcgaca ttaccgcacg tacggccggg aacgtcatcg ttgaaaacgc gatcattcag
    10021 atccgcgacg gcgtagaaca gggaaagagc tttgttgagc cgttgcgcgc gtccgagcta
    10081 tttccgcaca tggttgcgca gatggtgggg atcggcgaac aaaccggcgc gctggattcg
    10141 atgcttggga agattgctga tttctacgag caggaagtgg atacggcgat tgcgaatctg
    10201 ttgaccttga tggaaccggc gttgattggg tttctcggcg tgaccattgg aggcatcgtc
    10261 atcgcgatgt acatgccgat gttctcgctg attggcaagc tgtcatcggg ccactaaacg
    10321 tgagcagtgg cgttattgac cgccgctttt ctgccaccag tcaaaggtca ggcgtaaacc
    10381 ttcttcgagt ccgaccctgg gctcataacc gagcaatgat cgtgcgagcg agatgtcagc
    10441 aagactgtgt ctcacatctc cgacacggag cggctcatag cgtgccgccg ccgtcgattt
    10501 gccggtgaca ttcttcatta tctcaagcag ttcgttcagc gttacctgcc ggccgttcgc
    10561 gacatttatc accttaccga cggcgtcggc tgattcagcg gcgcgcaaat tcgcatcgac
    10621 gacg
//
LOCUS       DATDBY010000195         4574 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2889107, whole genome shotgun sequence.
ACCESSION   DATDBY010000195 DATDBY010000000
VERSION     DATDBY010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4574
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2889107"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..503
                     /locus_tag="VIT19_03665"
     CDS             <1..503
                     /locus_tag="VIT19_03665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838108.1"
                     /translation="RVTPSITQVYPSWPDYGPWSRDRWGRRNRRQTTPPIFGPPQNPY
                     GYPNGQYPNGYPGQNPYGYPQGQNPYGYPQGQPPYGYPGQNPYGYPGQNPYGYPGQGP
                     YGYPNQNPYGYPTSPYDADKSMQHADLTRRLDDLLMRRAGLMAQWQALEGEARDARVP
                     QIWLEP"
     gene            581..2056
                     /gene="gatB"
                     /locus_tag="VIT19_03670"
     CDS             581..2056
                     /gene="gatB"
                     /locus_tag="VIT19_03670"
                     /inference="COORDINATES: protein motif:HMM:NF004012.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEY5838109.1"
                     /translation="MTNVWETIIGLEIHAQLSTESKIFCGCSTHFGDEPNANTCPVCL
                     GLPGALPVLNRRVIELAARAALALGLQIQERSIFARKNYFYPDLPKGYQISQYDEPFS
                     MNGTLEIMTAERDEAGHARDWKPMTVGITRLHLEEDAGKNVHEGLPDVDRYSYVDLNR
                     AGTPLAEIVTEPDFRSSWEAYDYVNHVRRALQWVGASEADMEKGNLRCEANVSIRRKG
                     DKAFGTKVELKNLNSVRFMQKAIEFEVERHIKTLESGGRLTQETRLWDDHLNETRPMR
                     SKEEAHDYRYFPEPDLPPLVVSSELIDRVQASMPELPGPRAKRFTEQYGLSFADASQL
                     NSDRSLADYYEAAVEASGGNARATTNWIRSELLRELENAGLTADKSPVPAVELGALVR
                     MIDEGTISGKQGKDVLVEMFRSGKPAVAIVEERGLIQVSDSGEIDAVIDEVIAANPKQ
                     VEQFRGGKEGLFGFFVGQVMKASKGKANPKIVNERLREKLK"
     gene            2177..2896
                     /locus_tag="VIT19_03675"
     CDS             2177..2896
                     /locus_tag="VIT19_03675"
                     /inference="COORDINATES: protein motif:HMM:NF005594.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY5838110.1"
                     /translation="MDLTNKTAIVTGGSKGIGRGIAEALIREGVSVCISARHPNELTE
                     AVDQLNQLNGGRAVGFVCDVRDYRGVRNLVAHSIKELGGLDILINNAGIGIFKTVEET
                     SPEDFRAVLETNVFGVFYCCREAIPAMKQRGGGYIINISSLAGVNAHPRMAAYNASKF
                     GLNGFSEALMQEVRHDNIKVSYVMPGSVNTEFGGDSPSAEKSWQLQPQDIARVVLDLL
                     HQDDRSLVSRIEIRPSKPPKK"
     gene            2970..3593
                     /locus_tag="VIT19_03680"
     CDS             2970..3593
                     /locus_tag="VIT19_03680"
                     /inference="COORDINATES: protein motif:HMM:NF025595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4337 domain-containing protein"
                     /protein_id="HEY5838111.1"
                     /translation="MEASDAAEQIVETKENGADKFKSRAAMVIGFMAMLLAITSLGGG
                     NVLEDMIAHNIHASDTWAFYQAKTIRQTSLRVAADALEAELKINPNMTTDARQVLETK
                     INEYRKTAERYDDEPDKSDPTNPLKGEGRKQLTARARDFEAQREIAQKKDPNFDFAEA
                     LFQIAIVLASVSILATSRRILVFALVAGLAATLLMLNGYFLMLPNLL"
     gene            3599..4048
                     /gene="dtd"
                     /locus_tag="VIT19_03685"
     CDS             3599..4048
                     /gene="dtd"
                     /locus_tag="VIT19_03685"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HEY5838112.1"
                     /translation="MRAVIQRVTRAKVTVDGDSVGEIENGLVILLGIARDDTKVEAAY
                     LVDKITNLRIFDDEDGKMNLSVKDVSGALLIISQFTLYGDVRRGLRPSWIDAAPPEVA
                     GPLYDFFVRQARSAVDDVATGKFQAMMQVELVNDGPVTILLDSNKLF"
     gene            4278..>4574
                     /locus_tag="VIT19_03690"
     CDS             4278..>4574
                     /locus_tag="VIT19_03690"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY5838113.1"
                     /translation="MNRARVVSSLIGFLLLSLTACNSSKTNSNGANSNANAGAASKVK
                     SAQPIPDSQIAVIETAEYGRIVIELYPNIAPQHVERFKRLINEKFYDGSAIHRID"
BASE COUNT         1078 a         1239 c         1319 g          938 t
ORIGIN      
        1 cgcgggtcac accgagtatc acccaagtct atccctcctg gccggactat gggccgtggt
       61 cgcgcgatcg ttggggacgt cgcaaccggc gccagacgac tccgccgatc ttcggaccgc
      121 cgcaaaatcc ttacggttat cccaacgggc aatatccaaa tggttatccg ggacagaacc
      181 cttacggtta tcctcaaggc cagaacccct atggttatcc tcaaggacag cccccttacg
      241 gttatccagg tcagaacccg tacggatacc cgggtcagaa tccgtatggc tatccgggtc
      301 agggccctta tggttacccc aaccaaaatc cctatggcta tccgacgtcg ccttacgatg
      361 ccgataagtc tatgcaacac gcggatctca ctcgccggct ggatgatttg cttatgcgac
      421 gcgcagggct gatggcgcag tggcaagcgt tggaaggcga agctcgtgat gcgcgggtgc
      481 cgcagatttg gcttgaacca tgatcgtcag ttgtcagtag tccgtcgtca gttgtaaaaa
      541 ggaaccgaag cgaatacaac tgacaacgga caactgacga atgactaacg tttgggaaac
      601 tatcatcggg ctggaaatcc acgcccaact cagcaccgaa tcgaaaatct tctgcggatg
      661 ctcgacgcac tttggcgatg agccgaacgc gaacacgtgt ccggtgtgcc tgggtttacc
      721 gggtgcgctt cccgttttga atcggcgggt gattgagctg gcggcgcgcg ccgctttggc
      781 gctcgggctt cagattcagg aacgttcgat cttcgcgcgc aaaaactact tctatcccga
      841 cctgccgaag ggctaccaaa tctcgcaata tgatgaaccg ttttcaatga acgggaccct
      901 tgagatcatg acggctgaac gtgacgaggc cggccacgcg cgcgattgga agccgatgac
      961 cgtaggtatc actcggctgc accttgaaga agacgcgggc aagaacgtgc acgaaggctt
     1021 gcccgacgtc gatcgatatt cctacgtcga tttgaatcgc gcgggcacgc cgctggctga
     1081 gattgtcact gagcccgact tccgttcgtc ctgggaggcc tacgattacg tgaatcatgt
     1141 gcggcgcgcg ctgcaatggg tcggtgcgtc agaagcggac atggagaagg gaaatctccg
     1201 ctgcgaagct aacgtctcaa tccgtcgcaa aggcgacaag gcgttcggca ctaaggtcga
     1261 gctgaaaaac ctgaactctg ttcgttttat gcaaaaggcg attgagttcg aagttgagcg
     1321 acacattaaa acgctcgaat ccggcggacg tcttacccag gaaacgcgtc tgtgggacga
     1381 tcatctgaac gaaacgcgcc cgatgcgttc caaagaagaa gcgcacgact atcgttattt
     1441 tcctgagcct gatctgccgc cgctggtcgt cagcagtgaa ttaatcgatc gagtgcaggc
     1501 ctcgatgccg gaattgccgg gcccgcgcgc gaagcgcttc accgaacagt acggtctgtc
     1561 tttcgccgac gcgtcgcaac tcaacagcga tcgctcgttg gcggattatt acgaagccgc
     1621 agtcgaggcg agcggcggta atgcgcgcgc cacgacgaac tggattcgat ctgagttgct
     1681 gcgcgaactt gagaacgcgg gattgaccgc tgacaagtcg cccgttcccg ccgtcgaact
     1741 cggcgcgctc gtccgcatga ttgacgaagg aaccatcagt gggaaacaag gcaaggatgt
     1801 tctggttgag atgttccgca gcggcaaacc tgcggtcgcc atcgtcgaag agcgcggact
     1861 tattcaagtc agcgactcgg gcgaaattga cgccgtgatc gatgaagtca ttgccgccaa
     1921 tccaaaacaa gttgaacagt ttcgcggtgg caaagaaggt ctgtttgggt tctttgttgg
     1981 gcaggtgatg aaggcttcaa aaggaaaagc gaaccccaag atcgtgaacg agcgcctgcg
     2041 cgaaaaactg aaataatttg gagtgcggtg gcagagcgaa gcggcgacac cgctttcaat
     2101 gattgctgct gcaactccta aatccaaagc gccgtcgccg tcccgacagg tcgggactct
     2161 gccggcgcac tccataatgg atctcacgaa caaaaccgca attgtcactg gcggcagtaa
     2221 gggcatcggc cgcggcatcg cggaagcatt gattcgcgaa ggcgtttcag tgtgcatcag
     2281 cgctcgccat ccaaatgagc ttaccgaagc cgtcgaccaa ctgaatcagc ttaacggagg
     2341 tcgcgcggtc ggatttgtgt gcgatgttcg cgactatcgc ggcgttagga acctggttgc
     2401 tcactccatt aaagaactcg gcgggctcga cattctcatc aacaacgcgg gcatagggat
     2461 ctttaaaaca gtcgaggaaa cctcgcccga agattttcgc gcggtgcttg agacgaatgt
     2521 cttcggcgtc ttctactgct gccgcgaagc aattcccgcg atgaagcagc gcggcggtgg
     2581 ctacatcatc aacatctctt cgctggcggg cgtgaacgcg catccacgca tggccgccta
     2641 caacgcttcg aagttcggct taaatggttt tagcgaagcg ttgatgcagg aggtgcgtca
     2701 cgacaacatc aaggtcagct atgtcatgcc cgggtcagtc aatactgagt tcggcggcga
     2761 ctcaccgagc gctgagaaga gttggcaatt acaaccccag gacatcgcgc gtgtcgtcct
     2821 cgatctgctt caccaggacg atcgttcgct cgtcagccgc atcgaaatcc ggccgagtaa
     2881 gccgccaaag aaataatggc atcaggttgt tagccttgat gtccagcctt tgagagaacc
     2941 aaaattcata acggaagcca accaaaacaa tggaagcaag tgacgcagcc gaacaaatag
     3001 tcgagaccaa ggaaaacggc gcggacaagt tcaagtcgcg cgcagctatg gttatcgggt
     3061 tcatggccat gctgctggcc atcaccagcc tgggcggcgg caatgtcctt gaagacatga
     3121 tcgcccacaa cattcacgcg agtgacacct gggcttttta tcaagcgaag accatccgcc
     3181 agacttcctt gcgtgtggct gcggacgcgc tcgaggctga attgaagatc aacccgaaca
     3241 tgaccacgga cgcgcgtcag gtcctggaaa cgaagattaa tgagtaccgc aaaacggccg
     3301 agcgttatga cgacgagccg gacaaaagcg atcccacgaa tccgttgaag ggtgaaggtc
     3361 ggaagcaact aacggcgcgg gcgcgtgact tcgaagcaca acgtgagatc gcgcagaaga
     3421 aagatcctaa cttcgatttt gccgaagcgc tgttccaaat tgcgatcgtc ctggcgtctg
     3481 tttcgattct ggccacgtcg cgtcgcatac tggtcttcgc gctggttgcc gggctcgcgg
     3541 cgacgctgct gatgctcaac ggttatttcc tgatgctgcc gaacctgctc tagaccgaat
     3601 gcgagccgtc atccagcgcg tcacgcgcgc gaaagttacc gttgatggcg attccgtcgg
     3661 cgagatcgaa aacggtctcg tcattctatt ggggatcgcg cgcgacgaca ccaaagtcga
     3721 agcggcatac ctggtggata agataacgaa cctgcgcatc tttgatgatg aggacggcaa
     3781 gatgaacttg tcggtcaaag atgttagcgg cgcgttgctg ataatttcgc aattcactct
     3841 gtacggcgac gtgcgtcgcg gtttgcgccc gtcgtggatt gacgcagcgc cgcccgaagt
     3901 cgcggggccg ctctacgatt tctttgtgcg ccaggcgcgc tcagcggtgg acgatgtggc
     3961 gacgggaaag tttcaggcta tgatgcaggt tgaattggtc aacgacggac cggtgacgat
     4021 tctgctggat agcaacaagt tgttctgact ttgcgttact ttgtgtcttt gcgccttggc
     4081 gtgaggatga gttcccggaa gctagcgcga tcgaccacgg cttagttcac gtaaagtcgc
     4141 aaagacacga gttgcttgag acggtgtagt aatcagaagc ggctcaatgc agaagcgcgc
     4201 acgaagtaag cgcggcgtct gacgatcgca gaagagcgcg cgtgcttcgt gcacgaaaag
     4261 ttaaaggaga acgaattgtg aatagagcga gagttgtttc atccctcatt ggtttcctac
     4321 ttttgtccct caccgcgtgc aactcgtcaa agacaaactc caacggcgcg aactcgaacg
     4381 cgaatgcggg cgccgcgtcg aaggttaagt cggcacaacc gatccccgat tcacaaatcg
     4441 cggtaatcga gactgccgag tatgggcgca tcgtgattga actttatccg aacatcgcgc
     4501 cgcagcacgt cgaacgattc aagagactca tcaacgaaaa gttctacgac gggtcggcga
     4561 ttcatcgaat cgac
//
LOCUS       DATDBY010000196         2006 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_734290, whole genome shotgun sequence.
ACCESSION   DATDBY010000196 DATDBY010000000
VERSION     DATDBY010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_734290"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(186..1541)
                     /gene="rsmB"
                     /locus_tag="VIT19_03695"
     CDS             complement(186..1541)
                     /gene="rsmB"
                     /locus_tag="VIT19_03695"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: protein motif:HMM:NF011494.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEY5838114.1"
                     /translation="MTVAPARRSAFEILRRVETESAYASVLLAALDSRMREDDRALCH
                     ELVLGVLRRKLWLDKTIEHFGERKIEKLDLAVRLALEVGLYQLRFLTRVPASAAVNES
                     VNFVRASRVKSAAGFVNAVLRRATREPDYDPVAAIADPIQKLSIETSQPGWLIERWVQ
                     AFGFDEAAAFARANNQAAPTAVRLTAKASRDKGAEERVLQTLRDAGTEVIPSQIVPDS
                     WRVMGASNVLRELANEGLIYLQDEGSQLLAHLLNVEPHQRVLDLTAAPGSKATHIAAL
                     APSATIVAGDFHPHRVETMRRLAVQQDAHIRVLVHDATKPLPFTDESFDRVLLDAPCS
                     GTGTLRRNPEIRYRLRPDDISELAEQQKQMLACAAAVVRPGGRLLYSTCSVEPEENEQ
                     VIDQFASNHPGFKAINPGGAISSFMPHPSSLLSQPLSLRLWPHRQGSDGFFIAAYERE
                     D"
     gene            complement(1549..>2006)
                     /locus_tag="VIT19_03700"
     CDS             complement(1549..>2006)
                     /locus_tag="VIT19_03700"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY5838115.1"
                     /translation="AKRIRYSMQLTRRPICRRSSIVSPHPDNTFEIEQLLRHMNEEWV
                     KALSSRDGATLDRLMADDFVFSYPLEGDDKAQFIADCVSGNLTVRHINRDQISVRVFG
                     PTAILTARDTTNWIYHGRELAGQYKILSVYSKREGEWKLCALQACPINP"
BASE COUNT          448 a          580 c          555 g          423 t
ORIGIN      
        1 gagggactta gcgttgctgt agggtcgtcc ttctgttctt gtcgtgaggc gcggccgcac
       61 gacaagaaga gttccacgaa ccgcttagtt ttcgctaagc gtcgcaccct caccccatcc
      121 ctctcccaaa gggagagggg gccatcaagc cattcccaag agggacagca tcgttgtgat
      181 aaagatcagt cttcccgttc gtaagccgca ataaagaacc cgtcagagcc ttgccgatgt
      241 ggccacaaac gcagtgataa aggctgagag agcaaggatg aaggatgagg catgaaggat
      301 gaaatagcgc cgcccggatt gattgccttg aaacctgggt gattggaagc aaactgatca
      361 atgacttgtt cattctcttc cggttcaacg gaacacgttg agtacagcaa gcggcccccg
      421 gggcggacga cggcggcagc acacgcgagc atttgtttct gttgctcagc aagctcgctg
      481 atgtcgtcag gccttagccg atatcgaatc tccggatttc gccgtaacgt ccctgtgccg
      541 gaacacggcg catcgagcag aacgcgatcg aaagattcgt cggtaaaggg aagcggcttc
      601 gtcgcatcgt gaaccagcac cctaatatgc gcgtcctgtt ggactgcaag ccgccgcatt
      661 gtttcgacgc gatggggatg aaagtcgccg gcaacgatcg tcgctgacgg cgcgagagcc
      721 gcgatatgcg ttgctttgct tccgggtgca gcggtcaagt cgagtacgcg ttgatgaggc
      781 tcgacgttaa gcagatgtgc gagcaactgc gagccttcat cctgcaaata gataagcccc
      841 tcgttagcca attcccggag gacattcgaa gcgcccatga ctcgccacga atcggggaca
      901 atttgggacg gaatgacctc ggtaccagcg tctcgcaagg tttggaggac tcgttcttct
      961 gcgcctttgt cacgcgaggc ttttgccgtc aaacgaaccg cagtcggcgc ggcctgatta
     1021 ttcgcgcggg cgaacgctgc cgcttcatcg aatccgaacg cctgcaccca acgctcgatc
     1081 agccagcccg gctgcgacgt ctcaatcgat agtttctgaa tcggatcggc aatcgccgcg
     1141 accgggtcgt agtcaggctc gcgagtggca cgtcgcaaca ccgcgttaac gaatccagca
     1201 gccgatttca cccgcgacgc cctcacgaaa ttcactgatt cgttcacggc cgcggaggcg
     1261 ggaacgcgtg tcagaaaccg aagctgatac agccccacct ccaatgcgag tcgcaccgcc
     1321 agatccaact tctcgatctt acgttcgcca aaatgctcga tggttttgtc cagccacagt
     1381 ttgcgccgca gtacacccaa caccagttca tgacacagcg cgcgatcgtc ttcacgcatt
     1441 ctcgagtcca gcgcggccaa cagcactgac gcgtaggcgg attccgtttc gactctgcgc
     1501 agaatttcaa acgccgagcg acgtgcgggt gcaacggtca tcacttaatt aaggattgat
     1561 tgggcaggcc tgcagggcgc aaagcttcca ttcgccttcg cgtttcgaat agacgctgag
     1621 aatcttgtat tggcccgcca actcgcggcc atgataaatc cagttcgtgg tgtcacgggc
     1681 cgtcagaatc gcggtcgggc cgaacacgcg cacactgatt tgatcgcgat tgatatgtct
     1741 gactgtcaga ttaccgctga cacagtccgc gatgaactgg gccttgtcat ctccttcgag
     1801 cggataacta aacacaaaat catcagccat cagccgatcg agagtggcgc cgtcgcggga
     1861 cgataatgcc ttcacccact cttcgttcat gtggcgcaaa agctgttcga tctcgaaagt
     1921 attgtcaggg tgcgggctca ctatgctgct tctacgacag atcggccggc gagtcaactg
     1981 catcgaatac cgtattcttt ttgcgc
//
LOCUS       DATDBY010000197         9418 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1443829, whole genome shotgun sequence.
ACCESSION   DATDBY010000197 DATDBY010000000
VERSION     DATDBY010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 9418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9418
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1443829"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..778
                     /locus_tag="VIT19_03705"
     CDS             <1..778
                     /locus_tag="VIT19_03705"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HEY5838116.1"
                     /translation="PNEKMSARFDIPQRLESLVAHEIAHQWFGDSLTQSTWADLWLSE
                     GFATYFAALFIEKHDGEEAFREYLRDAAKVYFAYEQQRNAPIHDTQTQNLMQLLNPNN
                     YEKGAWVLHMLRKRLGDEAFFRGLRNFYNAHASGNATTEDLRSALEKSSGKNLGTFFA
                     RWIYGSGHPVYEWSSQATEMRNGSNSVTIVLKQTQAGAPFLDPVPVIVTSEGKTTSLT
                     LSPRGKVATATVRTGKVPISIQIDPEDTLLKELVSGQMEK"
     gene            complement(847..6579)
                     /locus_tag="VIT19_03710"
     CDS             complement(847..6579)
                     /locus_tag="VIT19_03710"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SBBP repeat-containing protein"
                     /protein_id="HEY5838117.1"
                     /translation="MSALLLLRFATDNSSAQITSSIAPPAASRTEPQATTAIADAYGR
                     LELSFIPNKGQTHGRVKFLSHGPGYELFLTKTETVLTLHRPRASTAENLQSSLLSLRL
                     VDANKNANLEGGDKQPGKVNYFIGKHRQDWRVNIPTYRKVIQRSVYPGIDLVYYGNQR
                     QLEYDFVVAPGADPARIRFQLEGAEQTNLDDNGDLRLTLAHGEVRLRRPVIYQLTNQG
                     GREEVDGSYLITDKGIAFKVGSFDRSKPLIIDPLLIYSTFLGGSGTEQGLGVAVDSHG
                     SAYITGSSTSTDFPLAAPLQGTKDSVEDAFVLKLNPAGTGLVYSTYFGGNGSDVANAI
                     AVDSQGNAYIAGLTGSGSFPTTAGAFQTSKSGSIDAFAAKLNPSGSALVYSTYLGGDN
                     NEIASGVAVDASGRAYVVGRTDSTQLNFFPVQRNGSPVYKSTDGAANWSASDAQLTAS
                     AVNAFALDPTNSNTLYAGTNTGVFKSINAGANWNLTGTARPSTAPVFTNTVAVDPSNT
                     SIVYAGMQGGGVFKSTNGGSLYDQKNSGLGSSVVNVLAIDPVNPTTLYAGTSIGIYKS
                     TNGADSWVEIKNGITGTSPRVNEIAIDPINPSTIYIGTNRGMFKTTNGGALWAAINNG
                     PLSNPIPEILALVIDPLAPSTLYAAGRFGSQVLFKSTDGGATWTGSSNGLIYSAGGQS
                     IVPQINMLAINSVSTGTLYAAASGGGIYKSTDGGANWSQANSDVIKSQTLAVAVDRVN
                     PAIVYAGTTIGADAFIARLNGAGSAAEYIMNFGGNQHDEARGVALDASNNAYIIGTTN
                     SQNFPVQNAFQSAFGGLSDAFVSKINAAGTGFIYSTFLGGSNSDLGRAIAVRADRPYV
                     VGQTLSTNFPLVNPIKSSLDQFDGDAFITGFNAAGNALEFSTYFGGGEGFDDALGIAL
                     DNGGAIYVTGSTSSPLFPVLNAAQPARAGSVDAFVTKLNPAGTSINFSTYLGGFLTDV
                     GNGIAVDNSGNAFVVGNTSSSNFPTVNPLQSTLKSTDAFIAKIGIQADLSVTKRDSRD
                     PVLVNSPLTYTLNVSNNGPSPATGVMVLDTLPSSLTLNAATPTQGSCSLNNSILTCNL
                     GTLAPSAGAIIAVSVTPTATGMITNTASVTGTEPDAISANNTAAETTNISASPSIRGR
                     VTDANNIGLSGVLMTLTGTQAGSVLTDNMGFYQFAELPIGGNYVITPTKTNFSLEPES
                     ITFNSLSTDRSADFVAAVCTYSITPLTQSFSAAGGTGTVSVTSLRGCPWTAASSDSWL
                     NITSGASGLGSGTVNFSVSPTTVPRAAHLTVAGLNFAVYQESNSCGAPSFNVANYSLS
                     SRPVTAKAADLNGDGKVDLVVMGRFAGGDGAVMLNNGAGTFTTSSVSSGFEPQDFAIS
                     DLNGDNWPDLSFSNYNFSAVRILFNNGSGGFTFTSRTDIPFTSQGQPPFTRGMFSADL
                     NNDSKADLLVWTPGASAVQVLLATGGSGFSQVAPVVGSSFDVPIGIVDVNDDGKPDLI
                     YGGGGDNGRPISVRLGDGAGGFGTLIVSSGMIVSAYMGTGDFNGDGKLDLVASAGSGS
                     SNIIAVLAGNGTGLFTVKSSFVTAGMPNLTVADFNRDGKLDVAFVIGGSKATVVLGDG
                     LGGLGNAIPIDTGASDVTGGNFGITSGDFNGDARPDIGVADYGMGASVLLNGCPAAST
                     SLSISDFNVIEGNTGTVNAVFNVNLSAPSSGTVTVSYNTGNGTATVGSDYVGGSGLVS
                     FTPGQTTKTLTVPVNGDTATEANETFVVNLFTPTNATISKAVGTSTILNDDGGQVPIQ
                     LMFEDAATEPNRLATLDALLLTRDPFRVLSIGEWWNLGTDRNTRVVVFATNLSLNPGE
                     TAADVVVTLIDSSSQTHNIAAEDVRAIPGSDFTQVRFRLPNGLPAGNCTIVVKAHGQT
                     SNTGIFRIAP"
     gene            complement(6943..7929)
                     /locus_tag="VIT19_03715"
     CDS             complement(6943..7929)
                     /locus_tag="VIT19_03715"
                     /inference="COORDINATES: protein motif:HMM:NF041895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Reeler domain-containing protein"
                     /protein_id="HEY5838118.1"
                     /translation="MWSGYHRWLLIVILLLAGFAITLVTDSIVNPRAVAFSSGPPPGY
                     TRAPGEEPEACAECHLSPGDPGSGQISITAPSLYVPGQTYQITVTHTNSDPTRLRWGF
                     QLTVLDPSDEKAGELLNINPALTQIIQGGPGGNRQYIEHAAGGTFINQTGGASWTFNW
                     TAPPADVGVVTFYAAGNHANNNGSSSGDYIYFTFKSSQADPTPQLRLDSSGPDANQAA
                     AFDSLLLLRDPFPKQSIAPWLDLGSDQNTRVIVFVANLNFTAGETVSVNLVDANSQTF
                     DVVAEDVRAVLNSDVAQVRFRLPDTVATGLCTVKVRKGSGPFSNAGTFRVDS"
     gene            complement(8015..>9418)
                     /locus_tag="VIT19_03720"
     CDS             complement(8015..>9418)
                     /locus_tag="VIT19_03720"
                     /inference="COORDINATES: protein motif:HMM:NF019040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HEY5838119.1"
                     /translation="PSRRDFLRTGACALGGAALASSFDSFGLVHALTPQAATDYRALV
                     CIFLNGGNDGNNTVVDLNQYSSYANARGVDLAIPQPSLLAVSPITGGSYGFHPNLTGL
                     RDLFNPPFQKLAVISNVGPLVEPLTKTTYMSGAGKKPLQLFSHSDQVGLFQTSIANVV
                     AQTGWSGRVADTLGGLNGSATFPQNISIAGINLLLTGVNTRQLAVADSNTSLANVLQL
                     TMTSSGHTTQEMTARTNSFNQLRDYDRNLTLIKAASDTRTSAIQTDAALSTVNPILTT
                     VFPNTSLGRQLQQVARLIKASTDPTAGINMKRQIFFCQIGGFDTHSSQITGQNNLMTQ
                     VSAAMRALYDATVELGLANNVTTFTLSDFGRTLQVSGTGAQAGSDHGWGNHHFIMGGS
                     VLGGRFYGTYPTLALGGPDDTNNPGSSARGRWIPTTSVEQYAATLATWYGLSAADLPA
                     VFPLIGRFSSPTLPFMT"
BASE COUNT         2142 a         2570 c         2624 g         2082 t
ORIGIN      
        1 accaaacgaa aagatgagcg cgcgtttcga catcccgcag cgtctcgaaa gcctcgtcgc
       61 ccacgaaatc gcgcatcagt ggtttggaga ttcgctgacg caatcaacct gggccgacct
      121 ttggttgagt gaaggtttcg ccacgtactt tgccgcgctg ttcatcgaga aacatgatgg
      181 cgaagaggcc tttcgcgagt acctacgtga tgctgcgaag gtttattttg cctacgagca
      241 gcagcggaat gcgccgattc acgacacgca aacccagaac ttgatgcagt tgctcaaccc
      301 caacaactac gagaagggcg cctgggtctt gcatatgttg cgcaagcgac tgggtgatga
      361 agcattcttc cgcggactcc gaaacttcta caacgcacac gcgtcgggca acgcgacgac
      421 cgaagatttg agatcagctt tagaaaaaag ttcgggcaag aatctcggca cgtttttcgc
      481 gcgctggatc tatggcagcg gtcatccggt ttacgaatgg tcttcgcagg ctacggaaat
      541 gcgcaatggc agtaactcag tcacgatcgt cttgaagcag acgcaagccg gtgcgccttt
      601 cctcgatccg gttccggtca tagtcactag cgaaggcaag acaacttctc tcaccctctc
      661 tccgagaggc aaagtcgcca ccgcgacggt tcgcaccggc aaagttccta tctcaattca
      721 gattgatcct gaagacacgc tgctgaaaga gctcgtcagc gggcagatgg aaaagtgagg
      781 ccggccgcgt ccagccaagg cagatgttta gttaaaaaac caggcgccgc cgaacggcgt
      841 ggcgtgttac ggcgcaattc gaaagatgcc cgtattactt gtctggccgt gagccttaac
      901 cacgatagtg cagttgccgg ccggaaggcc gttaggaaga cgaaatctaa cctgagtaaa
      961 gtccgagccc gggatggcgc ggacatcctc cgccgcgatg ttgtgggttt ggctggagct
     1021 gtcgataagg gtaacaacaa cgtcggccgc cgtctcgcca ggattgagac taaggttagt
     1081 cgcgaaaact acgacgcgcg tatttcggtc agtgcccagg ttccaccatt caccaatgct
     1141 gagcacgcgg aagggatctc gtgtgagcag gagcgcatca agagttgcta accgatttgg
     1201 ttcggtcgct gcgtcctcga acattaattg aattgggacc tgaccaccat catcatttag
     1261 gattgtgctt gtgccgacag ctttgctaat cgtggcattt gtcggagtaa atagattaac
     1321 cacgaaagtt tcattggcct cggtcgccgt atctccattg acgggtactg ttagagtttt
     1381 tgttgtctgt cctggtgtga aacttaccaa gccggagcct ccgacataat cactgccgac
     1441 ggtggcggtg ccatttccgg tgttataaga aacagtaacg gttccgctac taggcgccga
     1501 aagattgaca ttgaatacag cgtttaccgt gccggtattg ccctcgatca cattgaagtc
     1561 gctaatggac aggctcgtag aagcggccgg acagccgttt agcagcactg atgcgcccat
     1621 tccataatcg gccacaccta tatccggccg cgcatcgccg ttaaagtcac ccgaagtaat
     1681 tccgaaattg ccaccagtga cgtcgctcgc cccggtatcg atcggaatcg cattcccgag
     1741 tccgccaagt ccgtcaccca gcaccaccgt cgctttgcta cccccaataa cgaatgcaac
     1801 gtccagcttc ccatcacgat tgaaatcggc aacagttaag ttcggcatgc ccgccgtcac
     1861 aaatgacgac tttacagtga aaaggccggt accattgcct gctaaaacag caatgatgtt
     1921 agaagacccg ctgccggccg acgctaccag gtcgagtttg ccgtcaccgt taaagtcccc
     1981 agttcccatg taagccgaga caatcatgcc cgaagatacg atcagagtgc cgaagccacc
     2041 ggctccgtcg ccaagcctta cagagatcgg acggccgttg tccccgcctc cgccgtaaat
     2101 caagtccggc ttgccatcat cattaacgtc gactatgccg atcggaacat caaaggagct
     2161 accaacgacc ggcgcaactt gtgaaaagcc actgcctccg gtcgcgagca gaacctggac
     2221 agcgcttgct cccggcgtcc atacaagcaa gtccgctttg ctgtcattgt ttaagtccgc
     2281 actaaacatt ccgcgagtaa agggaggctg tccctgcgaa gtgaacggga tatctgtacg
     2341 tgaggtgaag gtgaatccgc cgctgccatt gttgaaaagg attcgaacgg cggagaaatt
     2401 gtagtttgag aacgacaaat cgggccagtt gtctccgttc aaatcactaa tcgcaaagtc
     2461 ttgcggctcg aatcctgagc tgacactgct ggtagtaaag gtccccgcgc cgttgtttag
     2521 cattactgcg ccgtcgcccc ctgcaaaacg tcccatcacg acgaggtcaa cttttccgtc
     2581 gccattcaaa tctgccgctt tagccgtaac cggccggctg gacaagctgt aattggcaac
     2641 gttgaagctc ggtgcgccgc acgagtttga ttcctgatag acggcgaaat taagaccggc
     2701 aaccgtcagg tgcgccgctc tcggaacggt cgtcgggcta accgagaagt tcaccgtgcc
     2761 gcttccgaga ccggatgcgc ccgaagtgat gttgagccaa ctgtcactac tcgcggcggt
     2821 ccacgggcaa ccgcgaagcg atgtgacgct gaccgtcccc gtgccgcccg ccgcgctaaa
     2881 gctctgtgtg agcggagtga tgctgtaggt acagactgca gcgacaaagt ctgcggatcg
     2941 atcagtactt agcgagttga atgttatcga ttcgggttcc agggaaaaat tcgttttggt
     3001 gggagtaatc acgtaattac caccaatggg taattcggca aattgataaa agcccatgtt
     3061 atcggttagt accgagcctg cctgggttcc ggtcaatgtc atcagcaccc cgctcaaccc
     3121 gatgttgttt gcgtccgtga cccgacccct gatcgaaggc gacgccgaga tatttgtagt
     3181 ttccgctgcc gtattgttcg cgctaatcgc atcaggctcg gttccggtga cgctggccgt
     3241 attggttatc attccggtgg cggttggcgt cactgaaacg gcgatgattg cgccggcact
     3301 cggagccagc gtgccgaggt tacaggtaag gattgagttg ttgagcgaac aactgccctg
     3361 ggtcggcgtc gccgcgttca acgtcaagct cgaaggcaac gtatccagga ccatgactcc
     3421 ggtcgccggc gagggcccgt tgttgctcac gtttagggta taggtcaacg ggctattaac
     3481 cagaaccgga tcccgcgagt ctctcttagt caccgaaagg tcggcctgta ttccgatctt
     3541 cgcgataaag gcgtcggtgc ttttcagcgt cgattgaagc ggatttacgg tcggaaaatt
     3601 cgacgacgaa gtgtttccca ctacgaaggc atttccagaa ttgtccaccg caatgccatt
     3661 accaacgtcg gtcaggaaac cgccgagata agtggaaaaa ttgatcgacg tgcccgcggg
     3721 attgagtttc gtgacgaaag cgtcaacgct tcccgcccta gccggctgcg ctgcattcag
     3781 gactggaaac aacggagacg aggtcgaacc cgtaacataa atcgcgccac cattgtctaa
     3841 cgcgattccc agggcatcgt cgaagccttc tcctccgccg aagtaggttg agaattccag
     3901 agcgttgccg gcggcattga atccagtaat gaaggcgtca ccatcaaatt gatcaagcga
     3961 tgactttatt ggattgacga gcggaaagtt ggttgagagt gtctgtccga cgacgtaagg
     4021 gcgatcagct cttaccgcga tcgcgcgtcc cagatccgaa ttgctgccac cgaggaatgt
     4081 cgaatagata aagccggtac cagccgcatt gatcttgctc acgaaggcat ccgacaaacc
     4141 gccgaaggca gattggaagg cattctgcac cggaaaattc tgcgaatttg tggtgccgat
     4201 aatgtaggcg ttgttgctcg catccagcgc caccccccgc gcctcgtcat gctggttgcc
     4261 gccgaaattc ataatgtact cagcggctga accggcccca ttaagtctcg cgataaaagc
     4321 gtccgccccg atagtggtcc cggcatacac gatcgcggga ttgacccgat cgaccgccac
     4381 ggcgagtgtc tgggacttga tgacgtcact atttgcctgg ctccaattcg ccccgccgtc
     4441 cgtgctcttg taaattccgc cccccgacgc ggccgcgtag agtgtgcccg tgcttaccga
     4501 gttgattgca agcatattaa tctgcggcac aatcgattgc ccgccggctg agtaaatcag
     4561 gccattgcta cttccggtcc acgttgcacc cccatcagta ctcttgaaaa ggacctgact
     4621 gccgaagcga ccggcggcat acaaagtaga aggcgcaagc ggatcgatta cgagcgcgag
     4681 aatttcggga ataggattcg acagtgggcc gttattgatg gctgcccaga gtgcgccgcc
     4741 gttcgtcgtc ttgaacatgc cgcggttcgt gccgatgtaa atcgtggaag gattgatcgg
     4801 atcgatggcg atctcattta cgcgcggcga ggttccggtg attccattct tgatttcaac
     4861 ccaactgtcg gctccgttcg tgctcttgta aataccgatt gacgtgccgg cataaagcgt
     4921 cgtgggattg actggatcaa tcgctaaaac atttaccacg gagctcccaa ggccgctgtt
     4981 tttctgatca taaagcgatc ccccattggt gctcttaaag acgccgccac cctgcatgcc
     5041 ggcatagaca atcgaggtat tggacgggtc caccgcgacg gtgttcgtga aaacgggagc
     5101 cgtggaaggg cgagccgttc ccgtcaagtt ccagttagca cccgcattga tgctcttgaa
     5161 tactccggtg ttagtacccg cgtagagagt attcgagttc gttggatcca gcgcaaaagc
     5221 attcacggcg ctcgccgtta attgcgcgtc actggcagac caattggctg caccgtcagt
     5281 gcttttgtag accggacttc catttctctg taccggaaag aaattcaatt gagtcgagtc
     5341 tgttcgtccg acgacgtaag ctcggccaga ggcgtcaacc gctacgccag acgcaatttc
     5401 gttgttatca ccaccgagat aagttgaata gaccagcgcc gagcccgacg ggtttagctt
     5461 tgcggcgaag gcgtcgatag acccgctctt ggaggtttgg aaagcgccgg ccgtcgtagg
     5521 aaaactcccg gaacccgtca ggcccgcgat gtaagcgttc ccctgtgaat cgaccgcaat
     5581 tgcgttggcg acgtcgcttc cgttgccacc gaagtacgtc gagtagacga gaccggttcc
     5641 tgctggattg agtttaagaa cgaacgcgtc ctcgacagag tctttcgtcc cttgaagtgg
     5701 cgccgccagg gggaagtcgg tcgaagtact gctgccggta atgtaggcgc tgccatgaga
     5761 atcaaccgcg acgcctaagc cttgttcggt gccgctgcca cctaagaagg tcgagtagat
     5821 caaaagcgga tcaatgatta acggtttgct tcgatcaaaa ctgccaacct taaaagcgat
     5881 tcccttgtcc gttattaggt aactgccgtc aacttcctcc cggccgcctt ggttagtcaa
     5941 ttgatagatt accggcctgc gtaatcgaac ttcgccgtgc gccagtgtaa ggcgcaaatc
     6001 accgttgtcg tccaggttag tttgttcggc tccttccagc tgaaaccgaa tccgcgcggg
     6061 atctgcacct ggcgcgacaa caaagtcgta ttcaagctgg cgctgattcc cgtagtagac
     6121 caggtcgatt ccgggataga cgctgcgctg gattactttt ctataggtgg gaatgttgac
     6181 gcgccaatct tgccggtgtt tgccgataaa gtagttcacc tttccgggtt gtttatcacc
     6241 gccttcgagg ttcgcgttct tgttggcgtc aactaatcgc aagcttagta aagacgattg
     6301 cagattttca gcggtgctgg cgcgcggcct gtggagcgtc agcacagttt ctgtcttagt
     6361 gagaaacagt tcgtatcctg gcccatggga gaggaacttt actcgtccat gcgtctggcc
     6421 tttgtttggt atgaagctta actccagtct tccataggca tcggcaattg ccgttgtcgc
     6481 ttgcggttca gttcttgaag ctgccggcgg cgcaatcgag gatgtgatct gtgctgaaga
     6541 gttgtcagtc gcgaaacgca acaacaggag ggccgacacc gccaagacaa ataggattgg
     6601 aaggcgttta gcctctatgc cgccgaaata ctgacgtaga cgaaggtgtt gcgggaatct
     6661 gttccgaccc aacggggtgc cggcacgcgc tgagcgtgga tgcagatcat catcatacgg
     6721 gcaaggaaag ggggataaca cttttaccgg ctttctatct gggcgcgatg tcacaattta
     6781 acgcgccctc acaacgaaat ttccgctaga accggtcggg aggctagagc ttaaaataca
     6841 ctctgagttt tagcaagaga ccttgcgatg cgacatgcca aaatctgtcc ggataccacg
     6901 gcggcggagg acccaatacg gggacatcac aagagaagct tattaggaat cgacgcgaaa
     6961 agtgcccgca ttgctgaaag gtccacttcc cttgcgcacc ttgaccgtgc agaggccggt
     7021 agccaccgtg tcaggtagcc tgaatctaac ctgggcaacg tctgagttga gaaccgcgcg
     7081 cacgtcttcc gcgacgacat cgaaagtctg actgttcgca tcaacaagat ttacagaaac
     7141 ggtttcaccg gcggtaaagt ttaggtttgc gacgaaaaca atgacgcgcg tgttttgatc
     7201 agaaccgagg tcgagccagg gcgcgatgct ttgtttggga aatggatctc gcaaaagcaa
     7261 aagcgagtcg aacgccgccg cttgattcgc gtcagggcca ctcgaatcca gccgcaattg
     7321 gggcgttggg tcagcttgcg aactcttgaa agtaaaatag atatagtcgc ccgaggagct
     7381 gccgttgtta ttcgcatgat tgcccgcggc atagaacgtc acgacaccca cgtcagccgg
     7441 tggcgcggtc caattgaaag tccaactggc gccacccgtc tggttgataa aggttccacc
     7501 tgccgcgtgc tcgatgtact ggcggttgcc gccaggccca ccctgaataa tttgggttag
     7561 ggccggattg atattcagta gctccccggc tttctcatcg gatggatcca acaccgtcaa
     7621 ttgaaatccc caccgcagtc gcgtcggatc ggaattcgtg tgagtcactg tgatctgata
     7681 tgtctggccg ggcacgtaca gagatggagc cgtgatcgaa atttgtcctg agccggggtc
     7741 gcctggcgac aaatggcact cggcacatgc ttcaggttct tcacccggcg cccgtgtgta
     7801 gcccggcggt gggccagaag agaaagcgac ggcccttgga ttcacgatgc tgtctgtgac
     7861 aagagtaatg gcaaagcccg cgagcagcag gataacgatc aaaagccatc ggtgataacc
     7921 actccacatt ttcggttctg ctcttactcc taactaaaat agcctagcgg gtgatcgcta
     7981 ggcatcctgg atttccgcaa gacacatgct caagttaagt catgaacggg agggtcggcg
     8041 acgagaacct cccaatcaac ggaaacactg cggggagatc agccgcagat aatccatacc
     8101 aggtcgcgag tgtcgcggcg tattgctcga ctgaagtcgt cggtatccac cggccgcgag
     8161 cactcgagcc ggggttattg gtgtcatcgg ggccacccaa cgccagtgtt ggatacgttc
     8221 catagaaacg tccgccgagg accgaaccac ccatgatgaa atgatggttg ccccagccgt
     8281 ggtcgctgcc tgcctgggca ccggtgccgg atacctgaag ggtccgtccg aaatcggaca
     8341 acgtgaatgt cgtgacgttg tttgccaaac ccaactcaac ggtggcgtca tagagggccc
     8401 tcatggccgc gctgacttgc gtcattaagt tgttctgacc ggtgatctga ctgctgtgcg
     8461 tatcgaagcc gccgatctgg cagaagaaga tctgtcgctt catgttgatg ccggctgtcg
     8521 gatcggtcga agctttgatc aatcgggcga cttgctgaag ttgccggccg agcgaggtgt
     8581 tcggaaacac tgtagtcaag atcggattca ccgtgcttaa ggccgcgtcg gtttgaatgg
     8641 cactggtgcg cgtgtcgctc gccgctttga tcaaagttaa gttccgatcg tagtcgcgca
     8701 gttggttgaa cgaattagtt cgcgcggtca tctcctgcgt cgtatgtccg ctgctggtca
     8761 ttgtcagttg aagaacattg gccagagaag tgttcgaatc tgccaccgca agctgccgcg
     8821 tgttcactcc ggtcaacaac aggttgatgc ccgcaatcga gatgttctgt ggaaatgtcg
     8881 ccgagccgtt caagccgccc agcgtatccg ccactcggcc gctccaccct gtttgcgcga
     8941 caacattcgc aatggacgtc tgaaacagtc ccacctgatc cgagtgtgaa aacaattgaa
     9001 gaggcttctt gccggcgcca ctcatgtagg tggtcttggt tagcggttca accaggggcc
     9061 caacattgga gatgacggcc aacttttgga aaggcggatt aaacaagtcg cgcaacccgg
     9121 tcaggttggg atgaaaccca taagagccgc cagtgatcgg tgaaaccgct aacaggcttg
     9181 gctgcggaat ggccaaatca actccgcgag cgttcgcgta cgaactgtac tggttgagat
     9241 cgacaaccgt gttattgccg tcgttgccgc cattcaaaaa gatgcagacc agcgcgcgat
     9301 agtcggtcgc ggcttgtggc gttaaggcat gaacaaggcc aaagctgtcg aagctggaag
     9361 ccagcgccgc gccgccgagc gcgcacgcgc ccgtccgtaa gaaatctctg cgtgatgg
//
LOCUS       DATDBY010000198         3710 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2481914, whole genome shotgun sequence.
ACCESSION   DATDBY010000198 DATDBY010000000
VERSION     DATDBY010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3710
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2481914"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..315)
                     /locus_tag="VIT19_03725"
     CDS             complement(<1..315)
                     /locus_tag="VIT19_03725"
                     /inference="COORDINATES: protein motif:HMM:NF013832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838120.1"
                     /translation="MSTADQAVSDLSEVQSPLSRTPLSSFLRSPMNWLLLFIPLTIVL
                     ERAHISAPVLFFMAAMAIIPIATQIVGATEQLATRTGDAVGGLLNATFGNAPEMIIAL
                     VAL"
     gene            600..1475
                     /locus_tag="VIT19_03730"
     CDS             600..1475
                     /locus_tag="VIT19_03730"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY5838121.1"
                     /translation="MAESIRPGSSIVESVLHPTDFSESSLIAFHHALRISMTERSKLT
                     LLHISPDQTAEWSDFPGVRDTLERWGALPKGSERSDVGKLGIEACKVVADQADPVDAV
                     VDFLKRRRADLIVLATTKRGGRVGWLGKSVAEPVTRKAGQTTLLIPAGTQGFVSARDG
                     SVRLNRVLIPVAAMPRPQPAINAAARLITKWNCPKGTFTLVHVGTKDTMPAVRWPEVS
                     GWVWKKELRTGPVVETIVEAAREFQADLIVMATDGRNGFLDAVRGSHSERLLRHGAAP
                     LLTVPVGSRISRHLA"
     gene            complement(1561..2343)
                     /locus_tag="VIT19_03735"
     CDS             complement(1561..2343)
                     /locus_tag="VIT19_03735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838122.1"
                     /translation="MNGDSLDFLPIWIVFPVTLVIGLLAVEIGCRVARRRKERAKEKT
                     EAPAAPIVAATLGLLAFMLAFTFGIAAARFEERRQALLSESNAIGTTYLRASVLPEPM
                     AADARNLLREYVDVRLAGADPSKLNEAISRSEELHKHLWSQAVGAAQKERSPMTSLFM
                     QSLNDVINLHEKRVMAALHSRVPGVIWLGLYLLLVLSMAVLGYHEGISGSRRSLAGFA
                     LVLAFSTVLVVITDLDRPGEGLLRVSQQSLVNVRKTMAATTP"
     gene            complement(2382..>3710)
                     /locus_tag="VIT19_03740"
     CDS             complement(2382..>3710)
                     /locus_tag="VIT19_03740"
                     /inference="COORDINATES: protein motif:HMM:NF006927.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter family
                     protein"
                     /protein_id="HEY5838123.1"
                     /translation="WIELLILLACIVIGARLGGIALGTVAGIGLAIFVFVFALPPGGP
                     PPGVLGMIIAVITALATMQAAGGLDYLVSLAERVMRKRPQHIVFIAPIATYLLVLGSG
                     TTHVIYALLPVIAEVARKGNVRPERPLSISVIAGFHGNIASPISAATVAMLGLLVANG
                     VSLPRLLMITIPSTFLAVLIGALSVAWRGKPLSEDPEYQKRLANGEIKDGENPAAPDR
                     KSLLKARGSMILFVVAIIAVVLIGIFPGLRPAYQVVTDGGVDTDQVSMGYAIMIVMIA
                     VAGLTMILFRVSPEQTIKGTIMRSGVTAIISILGVSWLGSSFFEGNRTYIVSQISGLV
                     QSYPSAFAGGMFLMSTLLFSQAATVSLLMPVGQALGVPLPLLVGFYPASNGLFFLPTY
                     GTVLAAVSFDQTGTTKIGKYLVNHSFMRPGLVTLVSATLIALALSKLLIS"
BASE COUNT          904 a         1016 c         1033 g          757 t
ORIGIN      
        1 taaagcaacc aacgcgataa tcatttcagg cgcattacca aaagtggcat ttaacaaacc
       61 gccgacggca tcgccggtcc gggtcgcaag ttgttcagtg gcgccgacga tctgagtggc
      121 gatcggaatg atggccatcg ccgccatgaa aaaaagcacc ggcgccgaaa tatgcgcgcg
      181 ctcgagcacg atcgtgagcg ggatgaacag caacagccag ttcatgggac tccgcaggaa
      241 gctactcaaa ggtgttcgcg atagcggcga ttggacttcg ctcagatcag aaacggcctg
      301 gtctgcggtc gacatatgat ctccttaaac taaaaccagc gagtggttcc gggcatgccg
      361 aatctcataa gacgggtcag cacgcctcca aacgcggcac aatcagcaga tgataggtgc
      421 ggtttgacct cttcgtttac tggcaaattt gacagtactg ctgagagaag gacagggcta
      481 agctgactcc gcgcggagag tccagcgaat tgtgacgcgg gcattgttct tgttggtttc
      541 tggatagggg atgtgtccga ccttctaagc aagaacgagt aaccagggga ggcaaaatca
      601 tggccgagtc aatcaggcct ggctcttcaa tagttgaaag cgtgctgcac cctaccgatt
      661 tttcagaatc cagcctaatt gcttttcacc acgcattaag gatctcgatg accgaaagat
      721 ctaagctcac tttgttgcac atttcaccag accagaccgc cgaatggtca gactttcccg
      781 gggtgcggga cacgcttgaa cgttggggag cattgcccaa aggtagcgag aggtcggacg
      841 taggcaagct tggtattgag gcttgcaaag ttgtcgcgga tcaggctgac ccggtcgatg
      901 cagtggttga ttttttgaaa aggcgtcgtg ctgatttgat agtgttggct acaactaagc
      961 ggggtggtcg tgttggttgg ctcggcaagt cggtggctga accggttact cgcaaagcag
     1021 gacaaacgac tcttctaatt ccggcgggca ctcaggggtt tgtctcagct cgagatggat
     1081 ctgtcaggct gaacagagta cttattcccg tagctgctat gcctcggccg caaccggcta
     1141 ttaatgcggc tgcccgcctg attacaaaat ggaactgccc gaaaggaact tttaccctgg
     1201 ttcacgttgg gacgaaagac accatgcctg ccgtccgctg gcctgaagta tctggatggg
     1261 tgtggaaaaa ggagctccgg accggcccag ttgtcgaaac aattgttgag gcagcaagag
     1321 agtttcaagc tgatctgatt gttatggcga ccgacggtcg taatggattc ctggatgccg
     1381 tgcgaggtag tcatagcgaa aggttactgc gtcatggcgc ggcgccgctc ctcaccgttc
     1441 ctgtcggttc gcgcatatca cgtcatctcg cttgaaagct tccacgtgtc ctttgctcgg
     1501 cctctttcaa atcgttcgcc gggccaatag cacagtccgg aatcatttcc gtaggccaat
     1561 ctatggcgtt gtggccgcca tggtctttcg cacgttgacc aacgattgtt gactcactcg
     1621 caacaacccc tcgccagggc gatctaaatc tgtgatgaca acgagtaccg tcgagaatgc
     1681 gagcaccagc gcgaatcccg cgagcgaacg tcgtgagccg ctgattcctt cgtgataacc
     1741 caggacggcc atggacagca ccaggagtaa ataaagaccg agccagatta cgcccggcac
     1801 ccgactgtgc agcgcggcca tcactcgctt ttcgtgcaaa ttgatcacat cgttcagcga
     1861 ttgcatgaaa agggacgtca ttggcgaacg ttccttttga gcggcgccga cggcctgcga
     1921 ccaaagatgc ttgtgcagct cttccgatct tgagattgct tcgtttaact tcgaagggtc
     1981 tgcaccagcc agccggacgt cgacgtactc gcgcaaaaga ttgcgagcgt cggcagccat
     2041 cggctccggc aacactgatg cccgcaaata agtggtgccg atcgcattgc tctcggaaag
     2101 tagcgcttgc cttcgttctt cgaaacgggc ggcagctatt ccaaacgtga aggcgagcat
     2161 gaaggccagc agcccaagcg tcgcagcgac gatgggcgct gccggcgctt ccgttttctc
     2221 ctttgcgcgc tcctttcggc gtctcgccac tcgacaaccg atttccaccg ccagcaggcc
     2281 aatgaccagc gtcaccggga agacgatcca aatcggcaaa aaatccagtg aatcaccatt
     2341 catcaagagc ctctcgttct gatcccaaat ttaagagtga gctatgaaat caatagcttg
     2401 ctaagtgcca acgcgatcag agtcgccgaa accagggtga ccagaccggg acgcatgaaa
     2461 ctgtggttca cgagatactt gccgatcttt gtggtgcccg tctgatcgaa tgagacggcc
     2521 gcgagcaccg tcccgtaagt gggcagaaaa aagaggccat tggacgccgg ataaaaaccg
     2581 accagtagcg gcagcggaac gccgagagcc tgaccgaccg gcatcagcag agaaactgtg
     2641 gctgcctggc tgaaaagcag cgtcgacatc agaaacatgc cgccggcaaa tgccgaagga
     2701 tacgattgaa ccaaccctga gatctggctc acgatgtagg ttcgattccc ctcgaagaaa
     2761 gaagaaccga gccaggaaac gccgagaatc gagatgattg ccgtgacgcc gctgcgcatg
     2821 atcgttcctt taattgtttg ctcgggcgag acgcggaaca gaatcatggt cagaccggca
     2881 accgcgatca tcacgatcat gatcgcgtaa cccatgctca cctggtcagt atcgacgccg
     2941 ccatccgtca cgacctggta cgcaggacgc agcccgggga aaatgccgat cagcaccacc
     3001 gcaataatcg caaccacgaa gagaatcatt gaaccacgag ccttaagcag actcttgcgg
     3061 tccggcgcag cgggattttc tccgtcctta atttccccgt tggccagccg tttttgatat
     3121 tccggatctt cgctcaaagg ttttcctcgc cacgcgactg acagcgcgcc aatcagtacg
     3181 gcaagaaagg tcgatggaat agtgatcatt agcaaacgtg gaagagatac accgttcgct
     3241 accagcaatc cgagcattgc cacggtggcc gccgagatcg gtgacgcaat gtttccgtga
     3301 aatccggcaa tcacgctgat tgagagtggc cgctcaggcc gaacatttcc tttgcgtgcg
     3361 acttcagcga ttacgggaag caaagcatag atgacgtggg tcgtgcctga gcctagtact
     3421 aaaagatacg tcgcaatcgg agcaatgaag acgatatgtt gcggacgctt tcgcatcacg
     3481 cgctcagcca gcgagaccag ataatcaagt ccaccggccg cctgcattgt cgccagcgcg
     3541 gtgatgaccg cgatgatcat tcccaggacg ccaggcggag ggcccccggg tggcaacgcg
     3601 aagacgaaaa cgaagatggc tagaccgatc cctgcgaccg tgccaagcgc aattccgcca
     3661 aggcgcgcgc caatcacgat acacgcaaga agaatgagca gttcgatcca
//
LOCUS       DATDBY010000199         2580 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1194119, whole genome shotgun sequence.
ACCESSION   DATDBY010000199 DATDBY010000000
VERSION     DATDBY010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1194119"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VIT19_03745"
     CDS             complement(<1..182)
                     /locus_tag="VIT19_03745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838124.1"
                     /translation="MKLRFSQRLVVLVVLATLVFGTHTISLLAQSRRQPPTSDQKKNK
                     RPPQGQETGEKEQEPVP"
     gene            complement(453..1199)
                     /locus_tag="VIT19_03750"
     CDS             complement(453..1199)
                     /locus_tag="VIT19_03750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838125.1"
                     /translation="MKRLLLRSAIVMVVGLGLTLPVLADTIRLKDGSVLRGEIVNFRN
                     EQFTILVGSGTRGRKSRITVYMEDVESIEFEGAPAEEASNTSTTPSQPTYQPPANTRP
                     ANNPPVTQPTSNPNTSSNPTFFPVNVRVRADNSTNGWTNSGLVVRRGQRLRINATGRA
                     NLGGNRFATPDGLANIQDREKLMRTQPTGGLIAVIGDDNDDFIFVGSSRDFVAQRDGV
                     LFLGINEGNLSDNTGTFEVVIEAEAGGNPR"
     gene            complement(1417..>2580)
                     /locus_tag="VIT19_03755"
     CDS             complement(1417..>2580)
                     /locus_tag="VIT19_03755"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-ribosomal peptide synthetase"
                     /protein_id="HEY5838126.1"
                     /translation="TVTSLFTPLMVGRSVFLLPDGIESLADALLQRTNYSLVKITPAH
                     LRALAEVLPSDQIAGRVRALVIGGEALHYQSLSFWRKHAPATRIINEYGPTETVVGCC
                     VYEVASHDPLDGPVPIGHAIANTNLHLLDEDLNPVADGDSGELFIGGHGVARGYLNRE
                     ELTRDRFLGNPFAAGEKLYRTGDLARLLPCGNFEYVCRVDDQVKIRGYRIEPGEIETV
                     LKQHANVSDCAVVVTETAADEKRLVAFVKNDESAQWDEDALRRSLHEKLPEYMVPAAF
                     VRLAALPLTVNGKIDRQALASQSVTLVSNGDFVAPRTPGEETLAGIWSDVLKVERVSV
                     NDNFFDLGGDSILGTLILARATRAGLKLSPVQLFEHQTIAELAAVAGAIPAAA"
BASE COUNT          535 a          729 c          774 g          542 t
ORIGIN      
        1 gggacgggct cctgctcttt ctcgcccgtc tcctgaccct ggggcggtcg cttgttcttt
       61 ttctgatcgg atgtgggcgg ctggcggcgt gactgcgcca aaagcgaaat cgtgtgagtg
      121 ccgaaaacga gcgttgccag aacgacgaga actaccaatc gttgggaaaa acgaagcttc
      181 atcatcacgt acctttcaac tgcaggccgg ttcagctggg gattggacta taggttgcgc
      241 ccgaaaacgg gtcaagcttg ctgagcggtc tgaggttgtg atgctgagaa gggcgggtga
      301 gtttaccccg agagtttgga gtgcgccggc aaagcaaccg gggtccccag cgcggcagcc
      361 gccttggggt ggtcgtagcg acgacggcgc tttggattag ccaggcggag atccaaagcg
      421 gtgtcgcgct acccttgcca ccgcactcca aattatcgcg gatttccgcc ggcttcggct
      481 tcgatcacaa cttcgaaagt gcccgtgttg tcgctcaaat ttccttcgtt gatgccgagg
      541 aagagcacgc catcgcgttg agccacaaag tcgcggctgc tgccgacgaa aatgaaatcg
      601 tcgttgtcat cgccaataac ggcgatcaaa ccgccggtag gctgcgtgcg cataagcttc
      661 tcgcggtcct ggatgtttgc cagtccgtcc ggcgtggcga accggttgcc gccaaggttt
      721 gcccggcctg tcgcattgat tcgcagacgt tgaccgcgcc tgacaaccag gccgctgttt
      781 gtccaaccgt ttgtcgaatt atccgcacgc acgcgcacgt tcaccgggaa gaaagttggg
      841 ttagatgaag tgttcggatt gctcgtcggc tgtgttaccg gggggttgtt cgcaggtcgc
      901 gtattggccg gcggctggta agttggctgc gacggcgtgg tcgaagtgtt gctcgcttcc
      961 tcggccggcg cgccttcgaa ttcgatcgat tcgacgtctt ccatgtagac ggttatgcgg
     1021 ctcttccgtc cgcgcgtgcc gctgccgact agaatcgtga actgctcgtt gcgaaagttg
     1081 acgatctcgc cgcgaaggac gctgccatcc ttcaaacgaa tcgtgtcggc cagcacgggc
     1141 agggtcaatc ccaaacctac gaccatgacg atggccgagc gcagcaaaag ccttttcata
     1201 gcgacctcca actgaagaaa aaatttgttt gccgattcgc gccacgcaaa tcgaggagag
     1261 cagtactatt gcagatgatt agcgaagtga attggttgcg aaaaacttga cgaaagtgcg
     1321 cgcagaccaa agcgaaaaac atgcaaaccc gcgtttcaag cacgggcaag tttaccacag
     1381 catggttcgc ctgctgatag gaaatcccgc caaccgttag gcggctgccg ggatggcgcc
     1441 ggcgactgct gccagttccg cgatcgtctg atgctcgaaa agttggacgg gcgagagctt
     1501 taggccggca cgcgttgccc gcgcgaggat cagggttccc aggattgaat caccaccgag
     1561 atcgaagaag ttatcgttga cgctgacgcg ctccactttc aggacatcgg accagatgcc
     1621 ggcgagtgtc tcttcacccg gcgtacgcgg tgcgacgaaa tctccatttg agacgagcgt
     1681 tacggattgt gaggcaagcg cctgacgatc aatctttccg ttaacggtaa gcggcaaagc
     1741 cgcgagcctt acaaatgcgg cgggaaccat gtactcgggc agcttctcgt gcaacgaacg
     1801 acgcagtgcg tcttcgtccc actgagcgct ctcgtcgttc ttaacgaaag cgactaatcg
     1861 cttttcatcc gcagctgtct cggtgacgac cacggcgcaa tctgaaacgt ttgcgtgctg
     1921 cttcagcacc gtttcgatct cgcctggttc gattcgatag ccgcgaatct tgacttgatc
     1981 atcgacgcgg caaacgtact cgaagtttcc gcagggcagc agccgcgcca aatcgccggt
     2041 gcgatagagt ttttctcctg cggcaaacgg attcccgagg aaacggtcgc gtgttaactc
     2101 ttcacggttc aggtagccac gcgcgacccc atgtcctcca atgaaaagct ctccactgtc
     2161 accgtccgcg acggggttca gatcctcatc aagcaagtga aggttcgtgt tggcaatcgc
     2221 atggccgatc ggcacggggc catccagcgg atcgtgcgac gcaacctcgt aaacacagca
     2281 tccgacgacc gtctcagtcg ggccgtattc gttgatgatt cgcgtggcgg gcgcgtgttt
     2341 gcgccagaat gaaaggctct gatagtgcaa ggcttcgccg ccgatgacga gcgcgcgcac
     2401 gcggccggca atctggtccg atggcaggac ttcagccagc gcgcgcagat gcgcgggcgt
     2461 aatcttcacc aggctgtagt tcgttcgttg caacagggcg tcggccagcg actcgatgcc
     2521 gtcgggtaga agaaaaacac tgcggccaac catcaaaggc gtgaacagac tggtgacggt
//
LOCUS       DATDBY010000200         4639 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1892079, whole genome shotgun sequence.
ACCESSION   DATDBY010000200 DATDBY010000000
VERSION     DATDBY010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4639
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1892079"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(217..2052)
                     /locus_tag="VIT19_03760"
     CDS             complement(217..2052)
                     /locus_tag="VIT19_03760"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEY5838127.1"
                     /translation="MTKQTRKSIDRRTFVKVLPAAGAAVIAASQAPLSALAQTASPTP
                     SPSPIPSPTPSPTPGRIKKNDLEHAEKVIGIDLSDKHRDMALSGVNTNLDRYDAVRKI
                     EVPLDTEPAVVFHPQLPGFHVKRARVKTKFRFGRNIPAQFKSVEDLAFARVPQLAELI
                     RTRKVSSVELTRMYLSRLKKYGPKLLCIVTLTEDLAMKQAEGADDDLKRGKYRGPLHG
                     IPWGAKDLFATKGIKTTWGAEPYRDQMIDYDATVIERLRDAGAVLVAKLSMGALAQGP
                     KWFGGVTRNPWAPDEDRQGASGSSAGPGAATAAGLVGFSIGTETLGSIISPSSRNGVV
                     GLRPTYGRVSRYGAMGLSWTMDKVGPMCRGVEDCAAALDAIYGPDGQDMTVGDAPFNW
                     NADVPLSSLRVGYLKAEFETTPSANATEQQRRIAGQRNRMYTEALDALAKAGVKMTPI
                     ELPKFPTANLRYILTAEAATAFDDITRDGRINQLSGQDNGDWPNTFRTNRFVPAVEYL
                     RAQRARVLLMREMDKLMRDWDVFVSPAPGSASLLITNLTGQPAVCLPCGFLDFPATQN
                     APAQHLPQAIMFTGGLYDEASPLRVALAFEKATQWHTMHPKVDWA"
     gene            2298..>4639
                     /locus_tag="VIT19_03765"
     CDS             2298..>4639
                     /locus_tag="VIT19_03765"
                     /EC_number="4.1.1.71"
                     /inference="COORDINATES: protein motif:HMM:NF008907.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional oxoglutarate
                     decarboxylase/oxoglutarate dehydrogenase thiamine
                     pyrophosphate-binding subunit/dihydrolipoyllysine-residue
                     succinyltransferase subunit"
                     /protein_id="HEY5838128.1"
                     /translation="MALEQTKIELSEIIAENFGANATYVESLLARFRSDPSLVDESWR
                     AYFEELLGNGQPAATAAQAPAQTVETAKPGGDGSKAATAPAKKSEPAAPRGPREGIPS
                     GVQDAAGPEPGREIIPIRGAALKIVENMEASLAVPTATSQRRIPVKLLEENRLIINRH
                     LQENDRGKASFTHLIAFALLRALDQFRQLNDGFEEIDGQPSRVKRASVNLGIAIDLEK
                     KDGTRSLLVPNIKNANRIQFPEFLAAYDDVVKRAREGKLQISDFQGTTISLTNPGTIG
                     TVASTPRLMVGQSLIIATGAIEYPAEYQSIAPVILPQLGISKAITISSTYDHRIVQGA
                     ESGAFLARVHELLIGKHNFYEQIFHDLGIAHAPLRWNVDQNPLFAGTDQMHEHALRQA
                     RVMELINAYRVRGHLVADIDPLHALPLLYHPELDIETYGLTIWDLDRIFITGGLGGTE
                     EATLREILDILQRAYCGKVGTEYRHIQSKEEKLWLREQIRRELVQPDPIDAEVKKQIL
                     WKLISAEQFERFLNTKFLGQKRFSIEGCETIIPLLDQLIEGAGEQGIQQITMGMAHRG
                     RLNVLANVIGHLCERIFTSFEGSVHPEFPADEGDVKYHQGAEGERETASGKTVRLRLS
                     PNPSHLEAVDPVVEGMTRAIQDAMADGEVTNDEARSCALPILLHGDAAFAGQGIVMET
                     LQLAQLRGYRTGGTIHIIINNQIGFTTSPEAGRSSIYSTDVARMTQSPIFHINGDDPE
                     AAFRTMRMALDYRQQFHKDVVLDVVGFRRLGHNEADEPSYT"
BASE COUNT         1001 a         1393 c         1319 g          926 t
ORIGIN      
        1 tgaagagtct tcttgattgc acgccggttc atgacgagcc gcctttcgat gattgttaga
       61 ggttggccgc caagggtcaa aacctcggcg tcatacggtc cacagaactg agaagaatct
      121 gggagaaaga gtagtggatg gggcttttcg agtcaaacga gtgatcggag agctcgcgta
      181 cgcaagggcg tagaactaat cgttgtccga cttaccttaa gcccagtcaa ctttcggatg
      241 catcgtgtgc cactgcgtcg ctttctcaaa cgcgagcgcg acgcgaagcg gtgatgcctc
      301 gtcgtacaat ccgccggtga acatgatggc ctgcggcagg tgttgcgccg gagcgttctg
      361 tgtcgcggga aagtcgagaa agccacacgg caggcaaacc gccggctgac cggtaagatt
      421 tgtgatcagc agactcgcgc tgcccggcgc gggcgaaacg aagacgtccc agtcccgcat
      481 cagcttatcc atctcgcgca tcagcaagac ccgcgcgcgt tgggcccgaa gatattcgac
      541 tgccggcaca aaccgattag tgcggaaggt gtttggccag tcaccgttat cttgtcccga
      601 aagttgattg atacgcccat cgcgcgtgat gtcgtcgaaa gcagtcgccg cttccgccgt
      661 caggatgtag cgaaggttag ccgtgggaaa cttgggcagc tcaatcggcg tcatcttcac
      721 gcctgctttt gcgagcgcgt cgagggcttc tgtgtacatc ctgtttcgct ggccggctat
      781 tcgccgctgc tgctcagtcg cgtttgcaga cggtgtcgtt tcgaactccg ctttcagata
      841 accaacacgc agactgctca agggcacgtc cgcgttccag ttgaacggcg catcgcccac
      901 cgtcatgtcc tgaccgtccg gaccgtagat cgcatcgagc gctgccgcac aatcttcgac
      961 accgcgacac atcggaccaa ccttgtccat cgtccagctc aggcccatcg cgccatagcg
     1021 actaacgcgg ccgtacgttg gccgtaaacc aactacaccg tttcgcgacg acggcgaaat
     1081 gatcgagcca agcgtctcgg tgccaatcga aaagcccacc agccccgcgg cggtcgctgc
     1141 gcccggcccg gcggaagatc cgcttgcgcc ctgccgatct tcgtcgggcg cccagggatt
     1201 acgcgtcacg ccgccgaacc atttcggccc ctgcgccagc gcgcccatcg aaagcttcgc
     1261 caccagtacg gcgcccgcat cgcgcaaacg ctcgatcacc gtcgcgtcgt aatcgatcat
     1321 ctgatcgcga taaggttcag cgccccacgt cgtcttgatg cccttggtcg cgaacaaatc
     1381 cttcgctccc cacggaatcc cgtgcagcgg cccccggtat ttaccacgct tgagatcgtc
     1441 atccgcacct tcggcctgct tcatcgccag gtcttctgtg agtgtcacaa tgcacaggag
     1501 cttcggcccg tacttcttca aacgcgacag gtacattcgg gtgagctcga ctgaagaaac
     1561 ttttctcgtg cggatcaact ccgcgagctg cggcaccctc gcaaaggcga gatcttcaac
     1621 cgacttgaat tgcgctggta tgttccggcc aaaccgaaac ttcgttttca cgcgcgcacg
     1681 tttgacgtgg aaacccggca attggggatg aaagacgacc gccggttcgg tatcgagcgg
     1741 cacctcaatc ttccgcacgg cgtcgtatcg atcgagattc gtgttaacgc cggacagcgc
     1801 catatcacgg tgcttatccg acaggtcaat accgattact ttctcggcat gctcaaggtc
     1861 atttttcttg atccgtccgg gtgttggtga tggcgtcggg gatggaatcg gtgatggtga
     1921 aggcgtcggc gaagctgtct gcgcgagcgc actaagaggg gcttgcgaag cggcgatcac
     1981 tgctgcgccg gcggccggaa gaaccttcac aaaggtgcga cgatcgatcg atttgcgagt
     2041 ttgtttagtc atggcggtgg tcggtggccg catacaatat cataagtgtt atttggagtg
     2101 cgccggcttt gacggcgctt tggatctgcc catggtgaga gacttccgcg gatccaaagc
     2161 ggcgtcgccg ctccgctctg ccgccgcact ccacatctgt atagcggatg caaaccaaaa
     2221 cggaaggtgc taacctaata actcaaacaa accttcattt ttagatcgcg gcgcgaagcc
     2281 gccaacggtg aattcctttg gccctggaac aaacgaaaat cgaactgtcg gaaatcatcg
     2341 ccgaaaattt cggcgcgaat gcgacctatg tcgagtcgct tttggcgcgc tttcgcagcg
     2401 acccttcgct ggtcgatgag tcatggcgcg cgtactttga agagctgctc ggaaatggcc
     2461 aaccggccgc aaccgcagcc caggccccgg cacagacggt tgaaacagcc aagcccggag
     2521 gcgatggcag caaagccgcg actgcgccgg cgaaaaagtc agaacccgct gcgccgcggg
     2581 gtccccgcga gggcatcccg agcggggtgc aggatgcggc ggggccagaa cctggaagag
     2641 aaattattcc gattcgcggc gccgccctca agatcgtcga gaacatggaa gcaagcctcg
     2701 ccgttcccac ggcgacttcg caacgtcgca ttcccgtcaa gctgctcgaa gaaaatcggc
     2761 tgattatcaa ccgtcatctt caggagaacg accgcggcaa ggcctcattc acccacctga
     2821 tcgcgtttgc tctgctgcgc gcgctcgatc agtttcggca gttaaatgac ggcttcgaag
     2881 aaatcgatgg ccagccctca cgtgtgaaac gcgcatcggt aaatctcggc atcgccatcg
     2941 atttggaaaa gaaggacggc acgcgctcgc tcctcgtacc aaacatcaag aacgcgaacc
     3001 gaatacagtt cccggaattt ctcgctgctt acgatgatgt tgtaaaacgc gcccgcgaag
     3061 gcaagctgca aatctcggac tttcagggca cgacaatctc tttgacgaac ccggggacga
     3121 ttggaaccgt tgcttcgacc ccgcggttga tggtgggtca gtcgctaatc atcgcgacgg
     3181 gtgcgatcga atatccggca gagtatcaat ccatcgcgcc ggtgattctg ccgcaacttg
     3241 gcatcagcaa agccatcacg atcagcagca catacgatca ccgcatcgtt cagggcgctg
     3301 agtcaggcgc ttttctcgca cgcgtgcacg aactgctaat cggcaagcac aacttctacg
     3361 aacagatttt ccatgatctg gggatcgcgc atgcgccgtt gcggtggaac gtcgatcaaa
     3421 atccgctgtt cgccggcacg gaccagatgc atgaacacgc cttgcgccag gcgcgcgtga
     3481 tggagctaat caacgcctac cgcgtgcgcg gacacctcgt tgccgacatc gatccgttgc
     3541 acgcactgcc gctgctctat catccggaac tcgacatcga aacgtacggc ctgacaatct
     3601 gggatctcga tcgcatcttt atcactggcg gtctgggcgg cactgaagag gccacgctgc
     3661 gcgagattct ggacattctt cagcgcgcgt actgcggcaa agtcggcacc gaataccggc
     3721 acattcagag caaagaagaa aagctttggc tacgcgagca gattcgccgc gaactcgttc
     3781 agccggatcc gatcgacgcg gaagttaaaa agcagattct ttggaagcta atctctgccg
     3841 aacagttcga acgattcctc aacactaagt ttctcgggca aaagcgattt tcgatcgaag
     3901 gctgcgagac gatcattccg ctgctcgatc aactgatcga aggcgcgggc gagcagggca
     3961 tccagcaaat cacgatgggc atggcgcatc gcgggcgcct gaacgtgctc gcgaatgtca
     4021 tcggccacct ttgcgaacgc atcttcactt cgtttgaagg ctcggttcat ccggagtttc
     4081 ccgccgacga aggcgacgtg aagtatcacc agggcgccga aggtgaacgt gagacggcga
     4141 gcggcaagac ggtgcgtctg cggctgtcgc caaatccaag ccatctggaa gccgtcgatc
     4201 cagtagtcga ggggatgacg cgtgcgattc aggacgcgat ggccgacggc gaagtgacga
     4261 atgacgaagc gcgaagctgc gcgctgccga ttctgctgca cggcgacgcg gcgtttgccg
     4321 gacaaggcat cgtgatggag acgcttcagc tggcgcaact tcgcggctat cgcaccggcg
     4381 gcacgattca catcatcatc aataatcaga ttggcttcac cacttcaccc gaagccggtc
     4441 gctcctcgat ctactccacc gacgtcgcgc gcatgacgca gtcgcccatc tttcacatca
     4501 acggcgacga tccggaagcg gcttttcgca cgatgcgcat ggccctcgat taccggcagc
     4561 aatttcataa ggatgtcgtg ctggatgtcg ttggcttccg tcgccttggt cacaacgagg
     4621 ccgacgaacc cagctacac
//
LOCUS       DATDBY010000201         3927 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1863494, whole genome shotgun sequence.
ACCESSION   DATDBY010000201 DATDBY010000000
VERSION     DATDBY010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3927
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1863494"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2080)
                     /locus_tag="VIT19_03770"
     CDS             complement(<1..2080)
                     /locus_tag="VIT19_03770"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HEY5838129.1"
                     /translation="MHRTRNFALVVICAAALLLSFTLPHAWAQKKPDAKTKSVEKNGD
                     ALFSSASAPNPDPVFAEKVKEYTTEPYFSTELVDHLPLSDTVPSPQKVLGYVVGTPNK
                     LTYTKDLHRYYRELDNASPRVRAFTAAEKSEEGKEQLLIAVGDEASIAKLDRYKEITA
                     KLADPRKINDAEAQQLIGEGKVFYWASGSIHSPETGSPEMLMELAYRLAVEESPFIQA
                     IRKNVIVLITPALEVDGRDRMVDLYNYRKANPGKNSPGLVFWGKYVAHDNNRDGLGMA
                     LALSRNQMKTFLEYHPQVLHDLHESVPFLYTSTGTGPYNAWLDPITVNEWQLLAYHEI
                     DEMTKRGVPGVWTHGFYDGWAPNYMFYVANGHNAIGRFYETFGNGGADTMDRTVGAQS
                     QRDWFRPNPPQPRVKWSLRNNVNMQQSAILLAMNFVSSNKERFLQNFYLKSKRSVAKA
                     TNEGPAAYVVPSDQSRLGEAADMINLLRLMGVEVHKADKEITVKDQKYPAGSYVVRMD
                     QPYSRMADMLMDTQYYNVNDPRPYDDTGWTMGPLRNVKTVRVTDKAVLQAPMTMLTAD
                     ARVVGKITGSASTAGYIINHNTENTLATLRFKLKDVKMSTAEDSFKIGNQQFNAGSFV
                     IRTEGNPTDVRQRLDGAVKELGLTALAVDKLPEVKTHELAVPRIAILHSWTNTQNDGW
                     YRIEFDRYQIP"
     gene            2440..>3927
                     /locus_tag="VIT19_03775"
     CDS             2440..>3927
                     /locus_tag="VIT19_03775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838130.1"
                     /translation="MFQKSILTFVTLLLVSTIQGQTATSRRPMMTSVDQSFFQGLRYR
                     LVGPARGGRVTTVTGVPAQPKTFYMGVASGGVFRTIDGGASWVPITDGKVPLGSTGSI
                     AVADSDPNVIYLGTGSDGVRSNVSTGRGVYKTTDGGLTWSFAGLYDAGQIGAVRIHPT
                     NPNMVWVSAGGDIFKPNSERGVFKTTDGGKSWRKVLFVSDQLGAMDVELQPGNPNVVY
                     AWMSRLERKPWTIISGAREGGFYKSTDGGEHFTKIMTGLPAELIGKGNLAVTAAKPNR
                     IYLLVEAKPGGGLYRSDDAGQTWMAMNPQPRNVNAQMIQRPFYYTTLGADPTNAEVVY
                     AGAESFFKSTDGGKTFSVLRPPHGDHHDIWINPKDGNALIQANDGGANVSYDGGRTWS
                     SQMNQPSAEIYGVWVDNQFPYKLYGAQQDNSTLIISSQADPYNRDDWRAGPGCETGPI
                     MPHPRDPNIVYGSCKGQYGVMNLRVGQEKSYWVGAQSLYGNPASDL"
BASE COUNT          810 a         1102 c         1134 g          881 t
ORIGIN      
        1 aaggaatttg ataacgatca aactcaatcc gataccaacc gtcgttctgg gtgttggtcc
       61 acgagtgcag gatcgcgatg cggggaacgg ccagctcgtg tgtcttcact tccggcaact
      121 tgtcgacggc gagcgccgtt aatcccaact ctttcaccgc cccatccagg cgttgccgca
      181 catccgtggg gttgccttca gtcctgatga cgaacgagcc ggcattgaac tgctgattgc
      241 cgattttgaa tgagtcttcg gccgtgctca tcttcacgtc tttcaatttg aagcgcagcg
      301 tcgccagagt gttctcggta ttgtgattga tgatgtaacc ggccgtcgaa gcagaacccg
      361 tgattttccc gaccacgcgc gcatctgccg tgagcatcgt catcggggct tgcagcactg
      421 ctttgtcggt aacgcgcacc gtcttaacgt tgcgcagcgg acccatcgtc cagccggtgt
      481 cgtcgtacgg ccgcgggtcg ttcacgttgt agtactgcgt gtccatcagc atgtcggcca
      541 tgcgcgagta gggctgatcc atgcgcacga cgtacgaccc ggccggatac ttttggtcct
      601 tcaccgtgat ttctttgtcg gccttgtgaa cttccacccc catcagccgc agcaggttaa
      661 tcatgtccgc ggcttctccc agtcgggact gatcggaagg aaccacgtaa gcagccgggc
      721 cttcgttcgt cgcttttgcc accgaccgct tgctcttcag ataaaagttc tgaagaaacc
      781 tttccttgtt gctcgagacg aagttcatgg cgagcagaat cgccgactgc tgcatgttga
      841 cgttgtttcg cagagaccat ttcacgcgcg gctgcggcgg attgggccgg aaccaatcac
      901 gctgtgactg cgcgccgaca gtgcgatcca tggtgtcggc gccgccgttg ccgaatgtct
      961 cgtagaaccg gccgatggcg ttgtgcccgt tcgcgacata gaacatgtaa ttcggcgccc
     1021 agccatcgta gaagccgtgg gtccatacac ccggcacgcc acgcttcgtc atctcgtcga
     1081 tctcgtgata cgcgagcagt tgccactcgt tcacggtgat cggatcgagc cacgcgttgt
     1141 aaggtcccgt gcccgtcgag gtgtaaagaa acggcactga ttcatgcagg tcgtgcaaaa
     1201 cttgcgggtg gtattcgagg aaggtcttca tctgattgcg cgagagcgcc agcgccatgc
     1261 ccaatccgtc gcggttgtta tcgtgcgcga catacttgcc ccaaaagacc agtcccgggg
     1321 aatttttgcc ggggtttgct ttgcgatagt tgtacagatc gaccatgcga tcgcggccat
     1381 cgacttccag cgccggcgtg atcagcacaa ttacattttt tcgaatcgcc tggatgaacg
     1441 gactctcttc aacggccagg cgatacgcga gttccatgag catctctggc gagccggttt
     1501 cgggagaatg gatcgaaccg gaagcccagt agaaaacttt gccttcgccg atcagctgct
     1561 gcgcctcggc atcgttaatc ttgcgcggat cggcgagctt cgcggtgatc tctttgtaac
     1621 gatcaagttt cgcgatcgag gcttcgtcgc caacggcgat caaaagttgt tcttttcctt
     1681 cttccgattt ttccgccgcg gtgaacgcgc gcacgcgggg gctcgcgttg tccagttcgc
     1741 gatagtaacg atggagatcc ttcgtgtagg tcagtttgtt tggcgtccca accacatagc
     1801 ccagcacttt ctgcggagac ggaacggtgt ctgacagcgg caggtgatcg actaactcag
     1861 tcgagaagta cggctcggtt gtgtactcct taactttctc tgcgaacacc ggatcgggat
     1921 tcggcgcgct ggcgcttgag aagagagcat caccattttt ttcgacagac tttgttttcg
     1981 cgtcaggctt tttctgcgcc cacgcgtgcg gcagcgtgaa cgagagcaac aaggccgcgg
     2041 cgcagatcac gacgagcgcg aaatttctgg ttcgatgcat ggctacctcc atccgaaaga
     2101 ctggcttgaa gttggactaa accctggcgt gcggcggcat attacgaggg tcggttgcaa
     2161 gagtaaagtt tcgacgctag tcagtggtca gttgtcggtg gtcggtactt gtacttagtg
     2221 ctttgtgctt tgtgctttgg tgtggttatg gaggagccca gtaacttaga acgagcttct
     2281 tacgagagac gtccaagcac aaagttctaa gcacaaagta caaaagccag cgactgacaa
     2341 ctgaccacgg acaactgact actgactact gatcactgac tactgactac tgaccgacgc
     2401 ggtgatattc tcttgccgcc tttcgcggag attccaacca tgtttcaaaa gtccattctg
     2461 accttcgtca ctcttctgct cgtttcaacg atccagggac agaccgccac cagccgtcgg
     2521 ccgatgatga catcggtgga tcagtcgttc tttcagggat tgcgttatcg cctcgttggt
     2581 cctgcgcgcg gcggtcgcgt cacgacggta actggcgtgc cggcgcagcc gaagaccttt
     2641 tacatgggcg tggcgagtgg cggtgtgttt cgcacgatcg acggcggcgc gagctgggtt
     2701 ccgatcaccg acggcaaggt tccgctgggc tcaaccggat cgattgccgt ggcggattcg
     2761 gatccgaatg tcatttacct gggcactggt tctgatggag tccgcagcaa tgtctcaacc
     2821 ggccgcggcg tctacaaaac cacagacggc gggctgacct ggagttttgc cgggctctac
     2881 gatgccggac agatcggcgc ggtgcgcatt catccgacga atccaaacat ggtttgggtg
     2941 tcggccgggg gcgacatctt caagcccaat tcagaacgcg gcgtcttcaa gacaactgac
     3001 ggcggcaaga gctggcgcaa agttttgttc gtttccgatc aactcggcgc gatggatgtt
     3061 gagttgcaac ccggcaaccc gaacgtcgtt tacgcgtgga tgtcgcggct cgagcggaag
     3121 ccctggacga tcatcagcgg cgcacgtgaa ggcggcttct acaaatcgac tgacggtggc
     3181 gaacacttta cgaaaatcat gacgggactg ccggccgagt taatcggcaa gggcaatctt
     3241 gcggtcaccg cggcaaaacc gaatcgaatc tacctgctgg ttgaagcaaa gcccggtggc
     3301 ggtctgtatc gatcagatga tgcgggacaa acgtggatgg ccatgaaccc gcagccaaga
     3361 aacgtcaacg cgcagatgat tcaacggccg ttttactaca caacgctggg cgctgatccg
     3421 acgaacgccg aggttgttta tgcgggcgcc gaaagcttct tcaaatcaac cgacggcggc
     3481 aaaacatttt ccgtactgcg cccgccgcac ggcgaccatc acgacatttg gatcaatcct
     3541 aaagacggca acgctctgat ccaggcgaac gacggtggcg ccaacgtgtc gtacgatggc
     3601 ggccgcacct ggtcaagcca aatgaatcaa ccgagcgcag agatttacgg cgtctgggtg
     3661 gacaaccagt ttccttacaa gctctacggc gcacagcagg acaactcgac gctgattatt
     3721 tcttcgcagg cagatcccta caaccgcgac gattggcgcg ccggccccgg ctgtgaaact
     3781 ggaccgatca tgccgcatcc gcgcgatccg aatatcgtgt acggctcgtg caaagggcag
     3841 tacggcgtga tgaacctgag agtcggacag gagaagagtt actgggtcgg ggcgcagtca
     3901 ctttacggaa atcccgcgag cgatctg
//
LOCUS       DATDBY010000202         4421 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1458182, whole genome shotgun sequence.
ACCESSION   DATDBY010000202 DATDBY010000000
VERSION     DATDBY010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4421
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1458182"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..784
                     /locus_tag="VIT19_03780"
     CDS             <1..784
                     /locus_tag="VIT19_03780"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MEDS domain-containing protein"
                     /protein_id="HEY5838131.1"
                     /translation="YETKNDLLHTLIPYFKAGLENNEFCLWIISKGELLTVAEAKAAL
                     RQAVPELDRYLAQGKMEILNHHEWFLQRGAFDLHIVVRQFNERLHQAKANGFDGIRVN
                     GSTTWVLKKDGREFREFEGELDKLISNRPMIVLCTFPLVATGAQDILDAARTHQFAVA
                     LRHGNWEVLETPGLGEVREDEKRQKTKDAAASSLERLTPRQRDVVRLIAEGHTTKEVA
                     LILNISVKTVESHRKNLMDRLDIHDVPTLVRYAIKAGLIELE"
     gene            complement(796..3666)
                     /locus_tag="VIT19_03785"
     CDS             complement(796..3666)
                     /locus_tag="VIT19_03785"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HEY5838132.1"
                     /translation="MSTPIEFDDDDDIIDVTPDQPRRRRRWWPWIVLAVLALLFISSR
                     ALSIYVSALWFGSLGYSDVYWYIFKLKLELFLIFLVLTTVILRLGFWVIERAFGAFTI
                     GPRTVLINQQPVQISPGRFIRPLAWIISIVAGLIFGLGMRAAWRDFALYLHAPQTPLA
                     DPIFNRPVSFYLFTLPIYEAVSSWLLYLAVIILIAVIAYALLAGTQETTLANSKSGSV
                     RKRAITIISVVLGAILLIFAWKTLLSRFPYLWQDHQIFSGVSYTEANHVLPGLRLVAI
                     GLVIAALVAVVNAFTLRKVRVLVAGIALPLAVYLVAVVFIPSYVQNFVVKPNELGRES
                     PYIEHNIAWTRRAFGLDKIELRNFEAETTVESFALQDNRETLENIRLWDWRALQDTLK
                     QMQAIRIYYDFPDVDVDRYQTGGRTRQVMVAARELNIERLPETSKNWVNQRLIYTHGY
                     GVTLNTANEFTPEGRPRFLLSNMPIEASADIKLTRPQIYFGQETNTPVYVKTKQKEFD
                     FPQSETEAAFTSYEGTGGIQLGGGLRRLLLAWAVGDMTKLPFSDDVTSESRLLINRNI
                     REIVNNLAPFLIYDRDPYTVISSDGRLFWVVDAYTETANYPYSRHHQIENNRVNYIRN
                     SVKVVIDAYNGTTNFYVFDPEDPLIAAYRATFPSLFRDANQMPADLRAHIRYPETLMR
                     AQGDVYGLYHVQNGRAFFQQEDAWSIAQQMTVDQQNKKQNQPIDPYFVLMQLPGEDKQ
                     AEFALILPFTPANRNNMIGWMAGRSDGENYGKLLAYNFPKSRLIDGPLQIEARIDQDA
                     QLSAQFSLWNQQGSRVLRGHLLVIPIGKSLLYVEPIYLQAVNSPMPELRLVVLATQER
                     LAFGQSFDAALANLFGDAGKPTAEQKPSEQKLASPDQPKTTPTPAAPTTTGTTQQLIN
                     RAVQEFEDYQKLMAAGRYAEAGKKLEEHKRTLEELKKASNKP"
     gene            3850..>4421
                     /locus_tag="VIT19_03790"
     CDS             3850..>4421
                     /locus_tag="VIT19_03790"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY5838133.1"
                     /translation="MLAPETVLQDRYRIVRQLGQGGMGAVYEAVDLRLDTVVALKETL
                     FTEERMRKQFEREARLLARLHHQALPRVSDHFTENEGAFLVMQYIPGEDLFEMQGRRG
                     SGFPQADVLQWADQLCDALDYLHTQDPQIIHRDIKPQNLKLTARGQIVLLDFGLAKGS
                     GGQMSVVTTSASIFGYTPNYAPLEQVQGLGT"
BASE COUNT         1025 a         1143 c         1281 g          972 t
ORIGIN      
        1 ctacgaaacc aaaaacgact tgctccatac tctgattcct tacttcaaag ctggattaga
       61 gaacaacgag ttttgtctat ggattatctc gaagggtgaa ttgttgacgg tggccgaagc
      121 caaagctgcc ttgcgtcaag cggtaccgga gctggatcgt tatctggctc agggaaaaat
      181 ggaaatcctg aatcaccatg agtggtttct gcagcgaggc gcattcgatc tgcacatagt
      241 tgttcgccag tttaatgaga gactccatca agccaaggcc aatggcttcg atggcattag
      301 agttaacgga agtaccactt gggtcttaaa aaaggatggc agggagtttc gcgaatttga
      361 aggagaactg gataagctaa tctcgaatcg accaatgatt gtcctctgca cgttcccgct
      421 tgtcgcgacc ggagcccagg acattctgga tgcggcccgc actcaccaat ttgccgtcgc
      481 gttgcgtcat ggaaactggg aagtgctcga gactccggga cttggtgagg tcagggaaga
      541 tgaaaagcga caaaagacaa aagacgctgc ggcgagctcc cttgaacggc taacaccgcg
      601 tcagcgtgat gtcgtgcgtc ttattgccga gggccacaca acgaaagaag tggccctgat
      661 tttaaacata agtgtgaaga cggtggagag tcatcggaaa aacttgatgg atcggctgga
      721 catacatgac gttcccaccc tggtgcgcta cgcgatcaag gccggcctga tcgaacttga
      781 gtagtgactc tgatgctaag gcttattgct cgccttcttt aactcttcca gcgtgcgctt
      841 gtgttcttca agtttcttcc ccgcctcagc atacctgccg gctgccatca gtttctggta
      901 atcctcaaac tcctgaacgg cgcggttgat tagctgctgc gttgtgccgg ttgtggttgg
      961 tgcggctggt gtaggtgtcg tcttcggctg atccggggag gccagcttct gctctgacgg
     1021 tttctgttcc gctgttggtt ttcccgcgtc accaaacaaa ttggccagtg ccgcgtcaaa
     1081 cgattgacca aacgccagcc gctcctgtgt tgccaacaca acaaggcgca attcaggcat
     1141 cggactattt actgcttgaa ggtagattgg ctcaacgtag agaagcgatt tgccaatggg
     1201 aatcaccagc aggtggccgc gtaggacgcg cgaaccttgc tggttccaaa gtgaaaactg
     1261 cgccgagagt tgggcatcct gatcgatgcg agcttcgatt tggagcggcc cgtcgatgag
     1321 gcgtgatttc ggaaaattgt aggccagcag cttcccatag ttctcgccgt cagagcgtcc
     1381 ggccatccag ccaatcatat tgtttcggtt ggccggcgtg aacgggagaa tcaatgcaaa
     1441 ctccgcttgc ttatcttcac caggtaactg catcaacacg aaataaggat cgatcggttg
     1501 attctgtttc ttgttctgct gatcgacggt catttgctgg gcgatgctcc aggcgtcctc
     1561 ttgttggaag aaggcacgtc cgttttgcac gtgatagaga ccgtacacgt cgccttgcgc
     1621 gcgcatgagc gtttccggat agcgaatgtg cgcgcgcagg tctgcaggca tttggttcgc
     1681 atcgcggaag aggctgggaa acgtcgcgcg gtacgcagca atcaacggat cctcgggatc
     1741 gaacacgtaa aagttcgtcg tgccgttata ggcgtcaatc acgaccttca cgctgttacg
     1801 aatgtaattg acgcggttgt tttcgatttg gtggtgacgg gagtacggat aattggccgt
     1861 ttcggtgtaa gcatccacga cccagaatag ccgcccatcg ctgctgataa cggtgtaagg
     1921 atcgcggtca tagattagaa agggcgccag gttgttgacg atttcgcgga tgtttcgatt
     1981 gatcagcagc cggctctcgg aagttacatc gtcagagaag ggcagcttgg tcatgtcacc
     2041 gacggcccag gccagtagca accgacgcag tccgccgccg agttggattc caccggtacc
     2101 ttcgtagctg gtgaaagcag cttcggtctc gctctgcgga aaatcgaact ccttctgctt
     2161 ggttttgacg taaaccggcg tatttgtttc ctgcccaaaa tagatctggg gccgcgtgag
     2221 tttgatgtca gcgctggcct cgatcggcat attcgaaagc agaaaacgcg gccggccctc
     2281 aggcgtgaac tcgttggcgg tattcaaagt cacgccatag ccgtgggtat aaatcagccg
     2341 ttgattgacc caattcttcg acgtttcagg caatcgctcg atgttcagct cgcgcgccgc
     2401 caccatcacc tgccgggtgc gcccgccggt ttgatagcga tcgacgtcaa cgtcgggaaa
     2461 gtcgtagtag atgcgaatcg cctgcatttg cttcagcgtg tcctgaagcg cgcgccaatc
     2521 ccaaaggcga atattctcca gcgtctcgcg attgtcctgc agggcaaacg actcgacagt
     2581 tgtctccgct tcaaagttcc gcagttcaat tttatcgagg ccgaaggccc ggcgcgtcca
     2641 cgcgatgttg tgctcgatat agggcgactc tcggcctagt tcgttcggct taacaacaaa
     2701 gttttggaca tacgaaggaa tgaaaacgac ggcgacgaga tagaccgcga gggggagcgc
     2761 gatgccggca accagcacgc gcaccttgcg cagcgtgaaa gcgttaacca cggccaccag
     2821 cgcggcgatt actagcccga tggctaccag gcgcaggccc ggcagcacgt ggttcgcttc
     2881 agtgtagctg acgccggaaa aaatctgatg atcctgccaa agatagggaa aacgcgacag
     2941 caaagtcttc cacgcgaaga tgagtaaaat cgcgcccaga accacagaga taattgtgat
     3001 cgcgcgtttg cggactgatc cgctcttgct gttggccagc gtcgtctcct gcgttcctgc
     3061 cagtaaagcg taggcgatta cggcgataag aataatgacc gcgaggtaca gcagccatga
     3121 gctaaccgcc tcatagattg gcagcgtgaa gaggtagaag ctgaccggcc ggttgaagat
     3181 cggatcggcg agtggcgtct gcggcgcgtg aagatacaac gcaaagtcgc gccaggcggc
     3241 acgcattccc agcccgaata tcaaaccggc aacgattgag attatccacg ccaagggacg
     3301 tatgaatcgt cccggcgaga tctgcaccgg ctgctgattg atcaggacag tgcgcggccc
     3361 gattgtgaaa gccccaaacg ctctttcaat cacccaaaaa ccgagacgca gaatgacagt
     3421 agtgaggaca aggaagatca gaaacaactc aagcttcagt ttgaagatgt accaataaac
     3481 gtctgagtag ccgagcgagc caaaccacag cgccgaaacg tagatagaaa gcgcgcggga
     3541 gctgatgaac aagagcgcaa gaacggcaag cacaatccac ggccaccacc gtcgtcttcg
     3601 tcgcggttgg tcgggcgtga cgtcgatgat gtcatcgtcg tcgtcgaact ctatgggcgt
     3661 gctcaagtgc acctagcata ctcactttcg gatgtgcagc aaacccaagc gggcccggcg
     3721 ctcgtcaaaa gcgaaacgat ttcttcgcgc cgtcgtgtaa tggttcaaga gaatcgtgaa
     3781 tatggttagc cttgcctgac ggggcaatgc taaacttccc agcgaattta ggattattgg
     3841 ggtaacgaaa tgctcgcgcc agaaacagtt ttgcaagatc gctaccgaat tgtgcggcag
     3901 ctaggccagg gtggcatggg cgcggtttac gaagcagtcg atctgcgttt ggacaccgtc
     3961 gtcgccttga aagagacgct tttcaccgaa gagcggatgc ggaaacagtt cgagcgcgag
     4021 gcgcgtctgc tggcgcggct tcatcatcag gctctgccgc gcgttagtga tcatttcacc
     4081 gaaaacgaag gcgcgtttct ggtgatgcag tacatcccgg gcgaagatct gttcgagatg
     4141 caggggcggc gcggcagcgg gtttccgcaa gcggacgttc tgcaatgggc ggaccagctt
     4201 tgcgacgcgc tggattacct gcacacgcag gacccgcaaa ttattcatcg cgacattaag
     4261 ccgcagaatt tgaagctgac cgcgcgcggg cagattgtgt tgctcgattt cggtttggcg
     4321 aaaggttcgg gagggcagat gtcggtggtg acgacttccg cgagcatctt tggctatacg
     4381 ccgaattacg ctccgctcga acaggtgcag ggactgggaa c
//
LOCUS       DATDBY010000203         2122 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2551812, whole genome shotgun sequence.
ACCESSION   DATDBY010000203 DATDBY010000000
VERSION     DATDBY010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2551812"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..870
                     /gene="argB"
                     /locus_tag="VIT19_03795"
     CDS             <1..870
                     /gene="argB"
                     /locus_tag="VIT19_03795"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEY5838134.1"
                     /translation="DLLREALPYIRRFKGKTFVVKLSGKVTEDRDQLISLAEELALMH
                     QVGIRICVIHGGGKQLSQLAEKMGVAQTIIEGRRVTDDETLEMAKMVFAGTINTNILA
                     ALRHRGTHAVGLSGVDGNIVHAERRPPKEIVDRATGESAQVDFGHVGDILEIDSKLLK
                     VLLDHDYLPVISSLGADAEGKIFNINADTIASEIAIQLNAEKLVLLSDVDGIYLPAGA
                     AKTKLSRMSADEAEDLIKNGAATGGMVPKLQNIIDVLRRGVRSAHIINGNYRNALLAE
                     VFTDEGTGTMIVA"
     gene            1055..1432
                     /locus_tag="VIT19_03800"
     CDS             1055..1432
                     /locus_tag="VIT19_03800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838135.1"
                     /translation="MKKLFAFIITTAILATMAAPAFAQRRRRVEAQSSRTYSSRTYTS
                     NRAYYDNRAAYDNSSYYDYNNQNRSVWSRHRDKLTVAAGTGAGAAIGAMTGGKKGALI
                     GALLGAGGSALYTYKIRNRGYRR"
     gene            complement(1682..>2122)
                     /locus_tag="VIT19_03805"
     CDS             complement(1682..>2122)
                     /locus_tag="VIT19_03805"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5838136.1"
                     /translation="ADAYYALGLTYRDSGQFDDEVGAYKNAIRLRPDYASAYDRLAQR
                     YLQMKKYTEAIEAFKQFAMLKPGDANAQNSLGEAYAAATKNEEATETFRQAIRLKPDF
                     GKAYYNLGKILLASGARDAAIEQYVVLQGLDEDWAEKLRNLIYP"
BASE COUNT          469 a          585 c          609 g          459 t
ORIGIN      
        1 gatcttctgc gcgaagcgct gccgtacatc cggcgcttca aaggcaagac atttgtcgtg
       61 aagctctcag gcaaagtcac ggaagatcgc gatcagctaa tttcgctcgc ggaagagttg
      121 gcgctgatgc atcaggttgg aattcgcatc tgcgttatac acggcggcgg gaagcagctc
      181 agccagttgg ctgagaagat gggcgtcgcg cagacgataa tcgaaggccg tcgtgtcact
      241 gacgacgaga cgctggaaat ggcgaagatg gtcttcgccg gcacaattaa tacgaacatc
      301 ctggcggcgt tacggcatcg tggcacccac gccgtcgggc tttccggtgt cgacgggaac
      361 atcgttcatg ccgaacgacg cccaccaaaa gagattgtcg atcgcgcgac tggtgaaagc
      421 gctcaggttg atttcggtca cgtcggcgac attctcgaaa tcgattcgaa actcctgaag
      481 gttctgctcg atcacgacta cctgccggtg atttcttcgc tcggcgcgga tgcggaaggc
      541 aagattttca acatcaatgc ggacacgatc gcttctgaga tcgccattca acttaatgcc
      601 gagaagttgg ttctgctgtc agacgtcgat ggaatctatc tgccggcggg agcggccaaa
      661 accaagctgt cgcgaatgtc cgccgatgag gccgaggacc ttatcaagaa cggcgcggcg
      721 acgggcggaa tggttcccaa gctccaaaac attatcgatg ttctgcgccg gggcgtccgt
      781 agcgcgcaca ttatcaacgg caactatcgt aatgcgttgt tggcggaagt cttcaccgat
      841 gagggcacag ggacgatgat cgtcgcttaa ccgccgcatc cctattccat ttgcggtgtc
      901 gcctgaaacg atatcgtaag tcctcccgct cgcccttctt cgactcgccg gaacatcaca
      961 gtttttcctt aaatttcagc ccgctcgcgg cttcggacgt cgccgcccgg tcatggcaca
     1021 accattgcca ttcgtctgag ccggagggcg tttcatgaaa aaattattcg cattcatcat
     1081 caccacagca attctggcaa ccatggcagc gccggcattc gcacaacgcc gacggcgggt
     1141 ggaagcccaa agctcgcgga cctatagttc gcggacatat accagcaatc gcgcgtacta
     1201 cgataatcgc gccgcttatg acaacagcag ttactacgat tacaacaacc agaaccgaag
     1261 cgtctggagc agacaccgcg acaagctgac cgtggcagcg ggaacgggcg ccggcgccgc
     1321 aattggcgca atgaccggcg gcaagaaggg tgctctcatt ggagcgcttc tgggtgcagg
     1381 cggctcggct ctgtacacgt acaagattcg taatcgcggt tatcgccgct aacgagtgca
     1441 gattgagttc ggttgtcgcg agacaaccgt gggttgaggc cggattgtga aggggagagc
     1501 gcaatccggc ctcgcttaac caaaaaagac ttagagtttt ttgaaaataa attgaattcg
     1561 gttgtcgcag gacgaccgtg ggttgaggcc gggttgtgaa ggggagagcg cgatccggcc
     1621 tcgatttctt tttgggtacg cacgcgtcac gcgtgctgca cgttggaagc gtgcgtaggg
     1681 tctacggata gatcaagttg cggagtttct ctgcccagtc ctcatccaga ccttgcagaa
     1741 cgacatactg ctcgatggcc gcatcacgcg cgccgctcgc taacagaatc ttgcctaaat
     1801 tgtaataagc cttgccaaag tcaggtttaa gacgaattgc ctggcgaaag gtttcggtgg
     1861 cttcttcatt cttcgtggcg gcggcgtagg cctctcccag actgttctgc gcgtttgcat
     1921 cacccggctt aagcatcgcg aattgtttga acgcttcgat ggcctcggtg tacttcttca
     1981 tctgcaagta ccgctgcgcg aggcggtcgt acgcgctggc gtaatccggc cgcagacgaa
     2041 tcgcgttctt gtaagcgccc acctcatcat cgaactggcc cgaatcgcga tacgtgagac
     2101 caagcgcgta gtacgcatcc gc
//
LOCUS       DATDBY010000204         3952 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2478296, whole genome shotgun sequence.
ACCESSION   DATDBY010000204 DATDBY010000000
VERSION     DATDBY010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3952
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2478296"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..369)
                     /locus_tag="VIT19_03810"
     CDS             complement(<1..369)
                     /locus_tag="VIT19_03810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838137.1"
                     /translation="MNIRTAAELMDADTNRLRPELFDKEILDFSIDSRTTESGELFFA
                     LSQPDYERAGFNGQFADAHDFIQSAFERGAIAAVARRDRVTSDPKLEGLVDRLLIVDD
                     AIAALQTLARRVYEQWARPVI"
     gene            complement(494..2560)
                     /locus_tag="VIT19_03815"
     CDS             complement(494..2560)
                     /locus_tag="VIT19_03815"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HEY5838138.1"
                     /translation="MPLRATAIDREAADPRRRAMFVALGLVAWMAIVGLRLVQLQITR
                     HTELATRAKNQQLGTVETSPTRGLLLDRKGRELARSVDTESFYADPREIQNVNETARK
                     ISSVTDLNKDELIAKISTAKESNKKFIWLIRRLDLQRASKLDAMALDGVYSRKEPKRF
                     YPNSELASHVLGFVGTDEIGLSGVEQVYNEKIRGEGGKVYMERDGSKERRVFDSYEVQ
                     PLPGQTVVLTLDQTIQFRTEQVLSAAVQRARAKSGTAIVMDPHTGEILAMANAPTFDP
                     NQPARDAPEVRANWALQNIYEPGSTFKVVPYSAALEKGLVTPEDKIDCQMGQITLAGR
                     LIHDHKPFGVLTVSDALAQSSNVGAIKLALLAGNESMYDYSRRLGFGSRTGIDLPGES
                     AGILRPLNRWQPSSIGSIAMGQEIGVTPLQMAVAYSVIANGGNWVKPHVVREMRSPDG
                     SVLFRAQPEMRPALKPETVEKLRTMMEGVTLRGTAKLAQVEGYTAAGKTGTAQKIDPK
                     TRAYSSTKFIGSFVGFAPVRNPKVVIIVVIDEPQGAYHGGDVAAPVFREIAEQILPEL
                     NVTPDVETKGASELIAETHKPSPQEMQQAIQNEQQREATLPKVAAKTFSGRANEVVLA
                     VATKRAPLMPDLRGQSVRDVWRTCAQLGLKLEAKGEGRAMRHSPAAGAEVSSGQTVRV
                     EFGRGP"
     gene            complement(2642..3100)
                     /locus_tag="VIT19_03820"
     CDS             complement(2642..3100)
                     /locus_tag="VIT19_03820"
                     /inference="COORDINATES: protein motif:HMM:NF016860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEY5838139.1"
                     /translation="MVRRLPSKHRNAPVGREKDKDAFFRLGLLLVVGLVLACGFVYAG
                     RQHFAALKFGYETEKLRGKRDQLAEDQRRLTLQREEAASPVRLEQLAKQLGMQTLQPA
                     QIDPLRQGTNNSRTVQTLTVRPNEKPAKREAEKNSKAVAKPAAKSQRKPI"
     gene            complement(3147..>3952)
                     /gene="rsmH"
                     /locus_tag="VIT19_03825"
     CDS             complement(3147..>3952)
                     /gene="rsmH"
                     /locus_tag="VIT19_03825"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: protein motif:HMM:NF013919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEY5838140.1"
                     /translation="SPDAQVLGIDRDEEALRLARERLAEFGGRFRAVRADFRELTRVL
                     ATAEVKAVRGILADLGVSSLQLDSPSRGFSFRHEAPLDMRMDMSSGETAADLLGRLSE
                     VEIARLIFEYGEERHSRRIARRIVARREAGEPVTSTTELANLVERAIGGKKRRIHPAT
                     RTFQALRIAVNRELEGLDQFVADAFDALEPHGRLAVISFHSLEDRIIKRTLLKLSGRC
                     QCPPRLPHCVCGAHQVIEILTRRPLTPTEDEIAENPRSRSAKLRIATRL"
BASE COUNT          754 a         1198 c         1116 g          884 t
ORIGIN      
        1 aatgacaggt cgcgcccact gttcgtagac tcttcgcgcc aacgtttgca gggcggcaat
       61 tgcgtcatca acgattagca gccgatcgac caagccttcc agctttgggt cgctggtgac
      121 tcgatcacga cgcgcgaccg ccgcgatggc gccgcgttcg aatgccgact gaataaagtc
      181 gtgagcgtcg gcaaactggc cgttgaatcc ggcgcgttcg taatcgggtt gagataaagc
      241 aaaaaagagc tcccccgatt cggtcgtgcg cgaatcaatt gagaaatcaa gtatttcttt
      301 gtcaaagagc tcgggacgca gacggttagt gtctgcgtcc attaactccg ctgccgttcg
      361 aatgttcaca tcgtcattat gtcagaagcc cgaccgtcag ggagggccac tggccaaaac
      421 tggcccttgc ttacgcgcgg gcttctgaca cgtagctcgt cggcgggcaa cgcccgcctc
      481 taaacgttcc agactagggt ccgcggccaa attcaacgcg tacggtttgt ccggaactta
      541 cttcagcgcc ggccgccggc gaatgacgca tcgcacggcc ttcacctttt gcttccaact
      601 tcaatccaag ttgcgcgcag gtgcgccaga cgtcacgaac gctctgcccg cgcaggtccg
      661 gcattaacgg cgcgcgcttt gtggcgacgg cgagtacaac ttcgttagcg cggccgctga
      721 acgtcttcgc cgccaccttc ggcagcgtcg cttcgcgttg ctgctcattt tgaattgcct
      781 gctgcatctc ctgcggcgac ggcttatgag tttccgcgat caattcactg gcgcctttcg
      841 tctcgacatc gggggtcacg ttcaactctg gaagtatctg ctccgcaatt tcacggaaca
      901 ccggagcagc cacatcgccg ccatggtagg ccccctgcgg ctcgtcgatt accacgataa
      961 tcacgacctt cggattgcgc accggcgcaa agccgacgaa cgatccgatg aacttcgtcg
     1021 acgagtacgc gcgtgtcttc ggatcgatct tctgcgccgt gcccgtcttg ccggccgcgg
     1081 tatagccttc gacctgggcc agtttagcgg tgccgcgcaa cgtcacccct tccatcatgg
     1141 tgcgcaattt ttcgacggtt tcgggcttca gcgccggtcg catttcgggc tgtgcgcgaa
     1201 agaggacgga cccgtcgggc gagcgcattt cgcgcacgac gtgcggcttg acccaattcc
     1261 cgccattcgc gatcaccgag taggcgaccg ccatttgcag cggcgtcacg ccaatctcct
     1321 gtcccatagc gatcgagccg atcgatgagg gttgccaccg attcaacggg cggagaattc
     1381 ccgctgactc accgggcaag tcgatgcccg tgcgcgaacc aaatcccaaa cgccgcgaat
     1441 agtcgtacat cgactcgttg ccggcgagca gcgccagctt gatcgcgccg acgttgctgg
     1501 actgcgccag cgcgtcagac accgtcagca ctccaaacgg tttgtgatcg tgaatcaagc
     1561 ggcccgcaag ggttatctgc cccatctgac agtcgatctt gtcttcggga gtcacgagac
     1621 ctttctcgag cgcggccgag tagggcacaa ctttgaacgt cgaacccggc tcgtagatgt
     1681 tttgaagggc ccaattcgcg cgcacctcgg gcgcgtccct ggccggttga ttcggatcga
     1741 acgtcggagc attcgccatc gccagaatct cgccggtgtg cggatccatc acgatcgcgg
     1801 taccggattt cgcacgggcg cgctgaactg cggctgacag tacctgctcg gttcgaaatt
     1861 gaatcgtttg atcgagtgtg agaaccactg tctggccggg aagcggctga acttcgtagc
     1921 tatcgaaaac gcggcgctct ttggatccgt cgcgctccat ataaaccttg ccgccttcgc
     1981 cgcgaatttt ctcgttgtaa acctgctcga caccactcag tccaatctca tcggtcccca
     2041 caaagccgag tacatgcgaa gcgagctccg agttcgggta gaaacgcttc ggttccttgc
     2101 gcgaataaac gccgtcgaga gccatcgcgt ccagcttgct cgcccgctgc aggtcgagcc
     2161 ggcggataag ccagataaat ttcttgttgg attctttggc ggtgctgatc tttgcgatca
     2221 gttcatcttt gttcaggtcg gtaaccgaag aaatttttcg cgcggtctcg tttacgtttt
     2281 ggatttcgcg cgggtcagca tagaaggatt ctgtgtcaac gctgcgggcc agctcgcggc
     2341 cttttcggtc caggagcaag cctcgtgtcg gactggtttc aaccgtgcct agttgctgat
     2401 tcttggcgcg cgtggcgagt tcggtatgtc tggtgatttg cagctgcacc agtcgcagcc
     2461 caacgatcgc catccatgct acgagcccaa gcgccacgaa cattgcgcgg cgtcgcgggt
     2521 cggcggcttc tctgtcgatg gccgtagcac gaaggggcat tcaagtctcc cgtgtatcgc
     2581 aagctgttaa cttgcgagcg ttctgcgcaa tcccgaaccc tcaggattgc gatacacgaa
     2641 ctcagattgg cttgcgctgt gattttgccg ccggcttggc gacggctttc gagttctttt
     2701 cggcttctcg tttcgccggc ttctcgttcg ggcgaaccgt cagcgtctga accgtccgcg
     2761 agttgttcgt tccctgcctc agcggatcga tttgcgccgg ttgcagtgtt tgcatgccga
     2821 gctgctttgc taattgttcc agtcgcaccg gactcgcggc ttcttcccgt tgcagagtca
     2881 gtcgccgctg gtcttccgcc aattgatcac gtttgccgcg aagcttctca gtttcgtaac
     2941 cgaacttaag cgccgcgaag tgttgtcgtc ccgcgtaaac aaaaccgcac gccaggacca
     3001 gaccaaccac gagcagtaag ccgagtcgaa agaacgcatc tttgtccttc tcgcgaccga
     3061 cgggtgcatt tcgatgtttc gagggtaagc gccgaaccat atccgggtct cctgaattgg
     3121 ccttgctcta aaaaatggaa gaggaactaa agcctggtcg ctattcttaa cttcgcgctg
     3181 cgagatcggg ggttctcggc aatttcatct tcggtcgggg tcagcggccg ccgcgtcaaa
     3241 atctcaatca cctggtgtgc cccgcaaacg cagtgcggca ggcgcggcgg acactggcaa
     3301 cgaccggaca gctttaaaag cgttcgcttg ataatgcgat cttcaagcga gtgaaaactg
     3361 attaccgcga gacggccgtg cggctctaaa gcatcaaacg cgtcagctac gaattggtcg
     3421 aggccttcga gctcgcgatt gactgcgatg cgcagcgctt gaaacgtgcg cgtggcaggg
     3481 tggatcctcc gctttttacc tccgattgcg cgttcgacca gattcgcaag ttccgtggtc
     3541 gaggttaccg gctcgcctgc ttctcgcctt gcgacgatgc gccgtgcgat gcgtcgtgag
     3601 tgacgctctt caccgtattc aaagatgagg cgcgcaattt ctacttcaga aagacgaccg
     3661 agcaaatctg ccgccgtttc gccgctcgac atatccatac gcatgtcgag tggcgcttcg
     3721 tgccggaaac tgaatccgcg cgagggcgaa tccaactgca acgatgaaac accgaggtcg
     3781 gcgagaatgc cgcgcactgc tttgacttcc gctgtcgcga ggacccgcgt aagttcacga
     3841 aagtcagctc gtactgcgcg aaagcggcca ccgaattccg ccagtcgctc tctcgccaac
     3901 cgaagcgctt cttcgtcacg atcgattccc agcacttgcg cgtcgggtga ag
//
LOCUS       DATDBY010000205         2981 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_8413, whole genome shotgun sequence.
ACCESSION   DATDBY010000205 DATDBY010000000
VERSION     DATDBY010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2981
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8413"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2000
                     /locus_tag="VIT19_03830"
     CDS             <1..2000
                     /locus_tag="VIT19_03830"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HEY5838141.1"
                     /translation="AFASAANAQQPAVAGTRYDVTNYRIEVQLQPDDHTLRAGADITL
                     TPLEATRSVVFELNGSLKVNSVEKDGRALPGIVQDPVGAGALGPNVRIDLGAVVPAGQ
                     PVTLRIRWSGALISPEGGPLASKRLAYVGTEGSYLMYAARWFPFHDYMADRATSDITV
                     IVPTGVQVGGISDEPVNPQVDKSGTTKFRFVQKTPQLVGNFVAGQFITKSLRFGRYEL
                     QFFVKPGSENRITPFGELMGRALDFYTKQYGTPAFGTRMIIAQTDDEAFDAYSGLGLL
                     FLASRFFEGRTTPEDRLQREIAYQWWGQTVGLKSFDDAWVSQGLAEWSAFAFRQSILT
                     GAQLDAAQREEQERALTFEQTSSIARAPASLDDQSAAYQSIVFYKGAMVFSMLRETLG
                     AEKFEELLARFVEQFRNKNASVDDFERLTSQVAGRNMRYFFAQWLEGTGVPEFSVDYQ
                     IIRTRNGKFRTRGTVRQNFENLNMPVELTLRSEGGDAQTKKLIFAGRSEDFDFESGGQ
                     PIAAEVDPNNKILRMSDDLKVSIVARRGIELFKDGQYAEAQQQMESALKLDRNNAWVY
                     YNLALVYFEQKNWQLALDNFQAAIDSTSSKPTWIDAWAHIKRGNAYDAKGDRNKAVFE
                     YNKALQTGSNYDNAQSVAKKFIETPFDPKTPSETVQATPGS"
     gene            2118..>2981
                     /locus_tag="VIT19_03835"
     CDS             2118..>2981
                     /locus_tag="VIT19_03835"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEY5838142.1"
                     /translation="MAHTSPAPSPQLKPEQAVAAHTLDRHLSVTAGPGAGKTRVLVER
                     YLEILRTQNASVDNIVAITFTNRAANEMRERVRGAIDALLRRAAPDERQRWLRHKRTL
                     EGAVITTIHGFCSRVLHEFPVEANIDPQFVLLDEQQATMMLEAVVDAALSNAIHHGNE
                     KIVKLAQGVGGRGVLSAVLADLYKNYRGEGLALSEIRRGAAANHSASEDYAAAFRELD
                     ARMSELLSDRVKTPAAREKQAKLAGEWPRVRAIVSQPPSEQTIAKYCQAIEDFRDVRP
                     AKNVIKKIDAID"
BASE COUNT          648 a          864 c          887 g          582 t
ORIGIN      
        1 ttgcttttgc gagtgctgca aatgctcaac aaccagcggt cgccggtacg cgctatgacg
       61 tcacgaatta ccggatcgaa gtgcaacttc agccggatga ccacacactt cgcgccggtg
      121 ctgacatcac tttaacgccg ctcgaagcca cgcgttccgt tgtttttgag ctgaacggct
      181 cattaaaggt gaactccgtc gagaaagatg gccgtgcgtt gccgggaatt gtccaggatc
      241 ccgtcggggc cggcgctctc ggacctaacg tccgaatcga tttaggggca gtggttcccg
      301 cggggcagcc ggtgaccctg cgaattcgct ggagcggcgc gttgatttcg ccggaaggtg
      361 gcccgctggc gagcaagcgg ctcgcgtatg tcggcacgga aggctcgtat ctgatgtacg
      421 ccgcgcgttg gttcccgttt cacgactaca tggctgaccg cgcgacgtcg gacatcaccg
      481 tgatcgtccc gactggagtg caggtgggcg gtatcagtga cgagccggtg aatccgcaag
      541 ttgataagag cggcacaacc aagtttcgtt tcgtgcagaa gacgccgcag ttagttggga
      601 acttcgtcgc cggacagttc attaccaaga gtcttcgttt cgggcggtac gagctgcaat
      661 tctttgttaa gcccggcagt gaaaatcgca tcacgccgtt cggcgagttg atgggccgcg
      721 cgctcgactt ctacacgaag cagtacggca cgcccgcgtt cggcacgcgc atgatcatcg
      781 cgcagactga tgatgaagcg ttcgacgcgt attcgggact tggcctgctg ttcctcgcgt
      841 cgaggttttt cgaaggccgc acgactcccg aagatcgttt acaacgagag attgcctatc
      901 aatggtgggg gcagaccgtc ggattgaaat cgtttgacga cgcctgggtt tcgcagggcc
      961 tcgccgagtg gagcgcgttc gcgttccgcc aatcaatact gaccggggcg caactcgatg
     1021 cggcgcagcg cgaagaacag gaacgcgcgc tgacttttga acagacttca tcgatcgcgc
     1081 gcgcgccggc gtcgctcgat gatcaatcgg cggcctacca atcgatcgtc ttctacaaag
     1141 gcgccatggt cttcagcatg ttgcgcgaga ccctgggcgc cgagaagttt gaagagctgc
     1201 tggcgcgatt tgtcgaacag ttccgcaaca agaacgcttc ggttgacgat ttcgagcggc
     1261 taacgtctca ggttgcgggg cgcaacatgc gctacttttt cgcgcagtgg ctggaaggca
     1321 ccggcgtacc tgaattcagc gtggattatc aaatcattcg gacgcgcaac ggcaagttcc
     1381 gcacgcgggg cacggtccgc cagaacttcg agaatctcaa catgccggtt gagctgacgc
     1441 tgcgctccga aggcggggac gcgcagacta agaaactgat tttcgccggc cgcagcgaag
     1501 acttcgactt tgaatcaggc ggccagccga tcgcggccga agtcgatcca aacaataaaa
     1561 ttctgcgcat gtccgacgat ttgaaagttt caatcgtcgc gcgtcggggc atcgagctgt
     1621 tcaaggatgg ccagtacgcc gaagcccagc agcagatgga atcagcgctg aagctggatc
     1681 gaaacaacgc ctgggtttat tacaaccttg cgctggtcta tttcgaacag aagaactggc
     1741 aactggcgct ggacaatttt caggcggcca tcgattcgac cagcagcaag cccacctgga
     1801 tcgacgcgtg ggcgcacatc aagcgcggca atgcgtacga tgcgaagggt gatcgcaaca
     1861 aggcggtgtt cgaatacaac aaggccctgc aaaccggcag caactacgac aacgcgcaat
     1921 ccgttgcgaa aaaattcatc gaaactccgt tcgatccgaa gactccctct gaaacagtac
     1981 aggccacgcc gggcagttaa ctgatttgga gtgcggtggc aaagccgcag gcgcgacacc
     2041 gctttggatg tttgatagca ttgcgcatcc aaagcgccgt cgtagctccg ctttgccggc
     2101 gcactccata atcttcgatg gctcacacat cacccgctcc gtccccccaa ctcaaacctg
     2161 aacaagccgt cgcggcgcac acactcgatc gtcatctttc cgtgacggcc ggtccgggcg
     2221 cgggaaagac cagagttctc gtcgaacgct acctggaaat tcttcgcacg caaaacgcct
     2281 cggtcgataa catcgttgcg atcactttta cgaatcgcgc agcgaatgaa atgcgcgagc
     2341 gtgtgcgtgg cgcgattgat gccctgctgc gccgtgccgc cccggacgag cgccagcgct
     2401 ggctccgtca caagcggacg cttgaaggcg ccgtcatcac gaccatccac ggtttctgct
     2461 cgcgcgtcct gcacgagttt cccgtcgaag cgaacatcga tccgcagttt gtgctgctgg
     2521 acgaacagca agcgacgatg atgctcgaag cggtcgtcga cgcggcattg agcaatgcca
     2581 tccatcacgg taatgaaaag atagtgaaac tcgctcaggg cgtcggcggg cgcggtgttt
     2641 tgtccgcagt cctggctgac ctttacaaaa actatcgtgg tgaagggctc gcactcagcg
     2701 agattagacg aggcgcggcg gcgaatcact cagcgtccga agattatgcc gcagcgtttc
     2761 gcgagctcga cgcgcgcatg tccgagttgc tgagtgatcg ggtaaagaca ccggcggcgc
     2821 gcgagaagca ggcgaagctc gccggcgagt ggccacgcgt gcgcgcgatc gtgtcgcaac
     2881 cgccgtccga gcaaaccatc gcgaagtact gccaggcaat cgaagacttc cgcgacgttc
     2941 gacccgccaa aaacgtcatc aagaaaatcg atgccatcga t
//
LOCUS       DATDBY010000206         2421 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_919964, whole genome shotgun sequence.
ACCESSION   DATDBY010000206 DATDBY010000000
VERSION     DATDBY010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_919964"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VIT19_03840"
     CDS             <1..235
                     /locus_tag="VIT19_03840"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEY5838143.1"
                     /translation="LNLIGKTTDEAVDLADKFLDEAFLNGLSEVRIIHGHGTGALRRA
                     VAEFLRDHPHVARFTSASPDKGGSGATVVELNS"
     gene            232..1143
                     /locus_tag="VIT19_03845"
     CDS             232..1143
                     /locus_tag="VIT19_03845"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY5838144.1"
                     /translation="MNATEVSQSEVGRLEPSIKSNPGQRPFKLHLVEGTSLKRLLFSI
                     IVGLVLSYVGLLLYGTMFAERMIFLPPVTGYRDTSTTLKLKSRDGVEISAVYLAHPQA
                     EYTILFSHGNAEDLGTLTPELEDMRALGFSIFAYDYHGYGTSGGQATEKNAYEDIDAA
                     YNYLTQVLKVPSDRIIAHGRSLGGAVAIDLASRKPLGGLIVESSFVSAFRVVTGYRIF
                     PFDKFRNADKIKQVSCPVLIIHGRQDEVIPFWHGERLFGIANNPKTNLWVDGAGHNNL
                     KPVAGKQYVQSMLAFRDSLETPAVLLK"
     gene            1160..2194
                     /locus_tag="VIT19_03850"
     CDS             1160..2194
                     /locus_tag="VIT19_03850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838145.1"
                     /translation="MPFKGRTPNNRTLAIAILTLCFSLAGSRSAQAQVDKWGAWDNGI
                     TEAWWLSSKTFTDEDLANAIIRWNSIGQVTSPGWEGDYFIGSEVHGTYVRWSREGGFI
                     IAGVDKCQALVMSVTYGRVDAAANTIRFIPEFSKSSKPHGHHSGKRAATLAFIPVKWR
                     DSLYLIPENEIEDFADYAAGLGQYNALNATEAILPESHFYSKYAGKTLLNDVPVLPDE
                     YQRFVKSPIAGEITAVVGRRLQRNYSYEFKSESYSFANQYELASMTFVTVNIGSLHGA
                     KKDLFLRVAQPNLGEAIRLVEVGPTSSKAILVREVENQKEMFYDHEAEREREYPRVKA
                     GWTLTTAPSP"
     gene            2203..>2421
                     /locus_tag="VIT19_03855"
     CDS             2203..>2421
                     /locus_tag="VIT19_03855"
                     /inference="COORDINATES: protein motif:HMM:NF013930.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CHC2 zinc finger domain-containing protein"
                     /protein_id="HEY5838146.1"
                     /translation="MRFPQTFIDDLRRQSDIVRIVQDYVTLKKAGANWVARCPFHKET
                     KPSFSVNPAKEIFYCFGCQKGGSVFNFVM"
BASE COUNT          583 a          649 c          645 g          544 t
ORIGIN      
        1 actcaatctc attggtaaga cgaccgacga agccgtcgat ctcgcggaca agtttctcga
       61 cgaagctttc ttgaacggcc tcagcgaagt gcgcataatt cacggccacg gcaccggcgc
      121 gctgcgaaga gcggtcgctg agtttctgcg cgaccatccg cacgtcgcgc gcttcacctc
      181 agcgtcgcct gacaaaggcg gctccggagc aaccgtcgtc gagctcaatt catgaacgcc
      241 acagaagtct cacaatcaga ggtagggcgg ttagagcctt caatcaaatc aaacccgggt
      301 caacgcccat tcaaacttca tctggttgaa ggtacaagcc tgaaacgtct gctcttttca
      361 atcatcgtcg ggcttgtgct ttcatacgtc ggtctgcttt tgtacggaac aatgttcgcc
      421 gaacgaatga tctttctccc gccggttacc gggtaccgcg atacgagcac gactttgaaa
      481 ctaaagtccc gtgacggggt tgagatttcc gccgtttacc tggcccatcc gcaggccgag
      541 tacacaatcc ttttcagtca cggcaacgca gaggacctgg gcacgctgac gccggaactc
      601 gaagacatga gagcgctggg cttttcaatc tttgcctacg actatcacgg gtacggaacc
      661 agcggcggcc aggcgaccga gaagaatgct tacgaagaca tcgacgcggc gtacaattac
      721 ctgactcaag tattaaaggt tccgtccgat cggattattg cgcacggtcg ttcgttgggt
      781 ggcgcggtcg caattgatct cgcgtcgcgg aagcctttgg gcggactcat cgtcgagagt
      841 tcgttcgttt cggcgtttcg cgtcgtgacc ggctatcgca tctttccctt cgacaagttc
      901 cgcaacgctg ataagatcaa gcaggtcagc tgtccagtgc tgataattca cggccgtcag
      961 gatgaagtaa tcccgttctg gcacggtgaa aggctgttcg ggatcgccaa taacccgaag
     1021 acgaatctgt gggttgatgg cgccggccac aataacttaa aaccggtcgc cggcaagcaa
     1081 tatgtgcaaa gcatgctagc attccgcgat tcacttgaaa ccccagcagt gctgctgaag
     1141 tagctcaaag gagcagccta tgccattcaa aggacgcacg ccgaacaacc ggactcttgc
     1201 gatcgcaatt cttacgcttt gcttcagttt ggcggggagc cgatcggctc aggcacaagt
     1261 cgacaaatgg ggcgcgtggg acaacggcat caccgaagcc tggtggctgt cgtcaaagac
     1321 tttcacagat gaggacctcg ccaacgcaat tattcgctgg aattcaattg gccaagtgac
     1381 gtcgccgggt tgggaaggag attacttcat cggaagtgaa gtacatggca cgtacgtgcg
     1441 ttggtcgcgc gaaggcggtt tcatcattgc cggcgtagat aaatgccagg cgctggtaat
     1501 gtcggttaca tatggccgcg tggacgccgc agcaaacact attcggttca ttcccgagtt
     1561 tagtaagagt tcaaaacctc acggccatca cagtgggaaa cgcgccgcga ctctcgcgtt
     1621 cattccggtg aaatggcgcg attctttgta ccttattcca gaaaatgaaa tagaggattt
     1681 cgccgactat gctgctggat tgggccagta caacgctctg aacgcgacgg aagcaattct
     1741 tcccgaaagc catttttatt ctaaatacgc aggaaagacg ctactcaatg acgttccggt
     1801 tctacctgac gagtaccagc gatttgtaaa gagcccgatc gcgggtgaaa ttacggcggt
     1861 cgttggaaga aggctgcaac ggaattattc ttacgaattc aaatcggaat cctattcgtt
     1921 cgcaaaccag tacgagcttg cttcgatgac ctttgtcacg gtgaacatag gtagccttca
     1981 tggagcgaaa aaagatctct tcctcagggt cgctcaaccc aatcttggag aggccatccg
     2041 cctcgttgag gtaggaccga catcctcaaa agcaatcctg gttcgcgagg tcgaaaacca
     2101 aaaagaaatg ttttacgacc atgaagccga gcgcgaacgg gaatacccgc gagtgaaagc
     2161 cggctggaca ctgacaactg cgcctagccc atagttagtc tcgtgcgttt tccccaaaca
     2221 ttcattgatg acctgcgccg gcagtcggac attgtccgca tcgtccagga ttacgtgacc
     2281 ctgaagaagg ccggcgcgaa ttgggtggcc cgttgtcctt ttcacaaaga gaccaagcct
     2341 tcgttttcag tcaatcccgc gaaagaaatt ttctactgct tcggttgcca gaagggcggc
     2401 tcagttttca acttcgtgat g
//
LOCUS       DATDBY010000207         5410 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2907425, whole genome shotgun sequence.
ACCESSION   DATDBY010000207 DATDBY010000000
VERSION     DATDBY010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5410
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2907425"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(87..2978)
                     /locus_tag="VIT19_03860"
     CDS             complement(87..2978)
                     /locus_tag="VIT19_03860"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEY5838147.1"
                     /translation="MAVSSQQIELNDDLVDELREIVGDENVLSDPDELLVYECDGLPQ
                     HKHLPRAVVFPNSTEETADVLALLHDEGVSFAPRGAGTGLSGGALAINRGVVIELARM
                     RKILKVDVENRLAQVQTGLVNAQLSRAVAPFGLYYVPDPSSQPACTIGGNIAENAGGI
                     HCLKYGTTTDHVVAARVVLADGSIVDLDLKSPGYDLLGVFVGSEGTFGIATEATVKLA
                     PIPPAIRTLLADFLNVEDASRAVSAIIAEGMLPAALEMMDNAIIRAIEANPVFAAGMP
                     IDAGAVLLVELDGIEAGIDDDVEKAEAILHAYGARSVRRADDEKERKKLWAARKGAFG
                     AVGRLMPDVMIQDAVVPRSRLPEVLAETYRISAKYNLQLANVFHAGDGNLHPLICFDL
                     RRGADLNSVREAGREIMETCVRAGGSITGEHGVGLDKSRYLPLIFSEDDMSAMLQVRA
                     AFDPSGLCNPGKIIPAPGGCGEGRAVATQFLSPLPLGEGQGEGLARRNSVPYPNPLPK
                     GEGEKSASIRQPLLAARMTETRIARELSRLLGDVGVRRLADYTLELQSNTRAERLIEV
                     TPASAEQAAEVMQFAAREGLAVLPAGARTFADAGNLLARADLILSTRRMDRMIAHEPA
                     DLVATAEAGLTLTAFQKQLAQNGQWLPVDPADDGSATLGGIVATGSGGPQSFGYGPLR
                     SFVIGLRVVLADGRQIKAGGRVVKNVAGYDLCKLFTGSFGTLGLITEVTFKLRPLPVE
                     TRTIVAVGSREALLAAGRLAANHSFPVAVEVVSPLLAETLALQTPPGKGLLLIRFAGS
                     PRTVITQTAQALKTLRDESFRCALYDDDAALWQVLGSAPLQTNYDLGWSARVRPTGLP
                     ALVEEIATLESDDAWHSAVRWHASAGDGRLRVMARSPLYHQEAGRALEGFRQTAEGRG
                     GSLFVEKAPVEVKRELDAWGSFASAGELMKRVKEQMDPESVLSPGRMFG"
     gene            3194..4837
                     /locus_tag="VIT19_03865"
     CDS             3194..4837
                     /locus_tag="VIT19_03865"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEY5838148.1"
                     /translation="MNLETHADKSALVADIIIVNAQIQTMDRNQPTAEAVAIHSNRIV
                     AVGSTTDIKKLAGSTTKVIDAKTRMVLPGFNDAHVHFLSGGFQLASVDLRDANTPQEF
                     ADRIRDFAAKLPEGRWITGGDWDHERWPDANLPTKELIDRYTPNTPVFVNRLDGHMSL
                     ANSVALKLAGVTSATKDPDGGVIVRDPKTGEPTGVLKDAAQSFVWKVIPPSTFEEKLV
                     AARAATNHAASLGVTSVQDMSAGVDVGVYQTLLDRGELKTRIYAVWPLPSWDRLARTG
                     IRAHFGSPMLRTGGLKGFSDGSLGSTTALFYEPYRDEPNTSGIPSDEMFPESAMLERV
                     RGADKAGLHVMIHAIGDRANDMILSIFEQVGKENGARDRRFRIEHAQHLRPQDIPRFA
                     RDKVIASMQPYHAIDDGRWAEKRIGKERAKTTYAFRSLLDAGATLAFGTDWTVAPLDP
                     MLTIYAAVTRRTLDGKNPNGWVPEQKISVQETVRAYTFGSAYAEAQENEKGTITPGKL
                     ADLVILSRDIFKIDPKEIQNVKVVMTIMDGRIVYEARLR"
     gene            complement(4816..>5410)
                     /locus_tag="VIT19_03870"
     CDS             complement(4816..>5410)
                     /locus_tag="VIT19_03870"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEY5838149.1"
                     /translation="VAVVYVLIQVVSIGTLPGLANSTKPLADAGQQFLGTAGGALISA
                     GAIISITGNLNIILLSGSRVPFAIAEQKQLPRFVGTIHRRFSTPHVSILITAAIMFIL
                     TLNSSFVAALTISAIARLVTYAATCLALPVLRQKKDVPEAVFRVRGGTIIAIACLILI
                     VWLLLNSTLYEAIVAALAAAVGFVIYLAYWFYRRRAS"
BASE COUNT         1205 a         1636 c         1528 g         1041 t
ORIGIN      
        1 gcaggaggca tagcctccaa acattccctt ctatggccgg aaagccggag gctttccgca
       61 cagcgtggcg gcaaagccgc agaacgtcaa ccgaacatcc gtcccggaga cagaacactc
      121 tcaggatcca tctgctcctt cacacgcttc attaactcac ctgccgaagc gaagctgccc
      181 cacgcgtcaa gctcgcgttt gacctcaact ggcgcctttt ccacaaacaa actcccgccg
      241 cgaccctctg ctgtctgcct gaatccttca agcgctcgcc ccgcttcctg atgatataga
      301 ggactgcgcg ccattacccg caaacggcca tcgccggcag acgcgtgcca gcgaaccgcc
      361 gaatgccagg catcatcgct ttccaaagtg gcaatttcct ccaccaaagc gggcagaccg
      421 gtggggcgta ctcgagcact ccaaccgaga tcataattgg tctgaagggg tgcggagccc
      481 agcacttgcc aaagagcggc atcatcgtca tagagtgcgc aacgaaagct ttcatcgcgc
      541 aaagtcttca gggcctgcgc tgtttgtgtg atgaccgttc tgggtgaccc ggcgaaccga
      601 atcaacagca agcctttgcc gggtggcgtt tgcagcgcaa gcgtttccgc cagcagaggc
      661 gacacaactt ctactgccac gggaaaagaa tggttcgccg cgagccgccc ggcagccagc
      721 aaggcttccc gtgaacctac ggccacaatc gtgcgcgtct caaccggcag aggccgcagt
      781 ttgaaagtga cttcggtgat cagcccgaga gtcccgaaac ttccggtaaa gagcttgcag
      841 agatcgtaac cggcgacgtt ctttactact ctgccgcctg ccttaatttg ccggccgtcg
      901 gcgagcacga cccgcaatcc aataacaaag gatcgcaaag gcccgtaacc gaacgactga
      961 ggtccgcccg atccggttgc gacaattcca cccagagtcg cgctgccgtc gtccgctgga
     1021 tcaaccggca accattgtcc gttctgcgcg agctgtttct gaaatgcggt gagcgtcagg
     1081 ccggcttcgg cggtcgccac caggtcggcc ggctcatgcg cgatcatgcg atccatgcga
     1141 cgcgtgctca gaatcagatc cgctcgcgcc agcagatttc ctgcatcagc aaatgtcctc
     1201 gcgccggcag gaagaactgc caggccttcg cgcgcggcga actgcataac ctcggcggct
     1261 tgttcggcgg aagccggcgt cacttcgatt aatctttctg cgcgtgtgtt cgactgtaat
     1321 tcgagcgtgt aatcggctag tcgccgcacg ccgacatctc ccaacaggcg cgaaagctcg
     1381 cgcgcgatcc gcgtctcggt catgcgggcg gcgagaagcg gttggcggat tgatgccgac
     1441 ttttctccct ctccctttgg tagagggttg ggataaggga cggagttacg gcgcgctaaa
     1501 ccctcaccct gaccctctcc caaagggaga ggggaaagaa attgcgttgc caccgcgcgc
     1561 ccttcgccac atccgcccgg cgcaggaatg atcttgccgg gattacacag ccccgaagga
     1621 tcgaaagcgg cacgcacttg cagcatcgcg ctcatatcgt cctcagaaaa tatcagcggc
     1681 agatagcggc tcttgtcgag tccgacgcca tgctcaccgg tgatcgagcc gccggcgcgc
     1741 acacacgttt ccatgatttc gcgccccgct tcgcggacac tattcaaatc ggcgccgcgt
     1801 cgcaggtcga aacaaatcag cggatgcaga ttgccatcgc cggcatgaaa gacgttggca
     1861 agctgaagat tgtatttcgc gctgatgcga tacgtttcgg caagtacttc cggcagccgc
     1921 gagcgcggca cgaccgcatc ctgaatcatc acgtccggca tcagccgacc gaccgcgccg
     1981 aatgcgcctt tgcgcgcggc ccaaagtttc tttcgctcct tttcatcgtc cgcgcggcgt
     2041 actgagcgcg cgccgtacgc atgcagaatc gcttctgctt tttcaacatc atcgtcaatg
     2101 ccggcttcga taccatcgag ttcgacgagc aataccgcgc ccgcatcgat cggcattccc
     2161 gccgcgaaaa ccggatttgc ctcgatggcg cggatgatcg cgttgtccat catttcgagc
     2221 gcggcgggca acattccttc ggcaattatg gctgagaccg cgcgactagc atcctcaaca
     2281 ttcagaaagt cagcgagcag cgtccgtatc gcaggcggaa tcggcgccag cttcacggtc
     2341 gcctcagtgg cgatgccgaa agtgccttct gagccgacaa acaccccgag caaatcgtaa
     2401 cccggacttt tcaggtcgag atcgacgatc gacccatcgg ccagaacgac gcgcgcggcc
     2461 acgacgtgat ccgtcgtcgt cccgtatttc aggcaatgaa tgccgccggc gttctcagca
     2521 atgttgccgc cgatggtgca cgctggttgg ctcgacggat cgggcacgta ataaaggcca
     2581 aatggtgcaa cggcgcgtga aagctgcgcg ttcaccagac ccgtctgcac ttgcgcgaga
     2641 cgattctcca catcgacctt cagaatcttt cgcatgcgcg cgagctcaat cacgaccccg
     2701 cgattgattg cgagcgcgcc ccccgacaaa ccagttcctg ctccacgcgg cgcaaagctc
     2761 acgccttcgt cgtgcagcaa cgcgagcacg tcagcggtct cttcagttga gtttggaaat
     2821 actaccgcgc gcggcaggtg cttgtgttgc ggcaagccgt cgcattcata aacgagcaac
     2881 tcgtcggggt cggaaaggac attctcgtcg ccgacaatct cgcgcaactc gtcaaccagg
     2941 tcatcattca attcaatctg ctgcgagctt acggccatga cggttgggtg aattgtttgt
     3001 gatttgccaa gggaacgtga tgatacacta cgcgcccagc tgctgggagc gcgggcgccc
     3061 tcgcccgcaa gagcttatca ataagctaat ttcatctgat gcggacgcag gcgtccgcgc
     3121 ccccagattg cgaggcgcca tgaaaaccaa attgctcgtc ttcgtagtga tagctttatc
     3181 tctgctcatg tcaatgaacc tagaaacaca cgccgacaaa tccgcgctgg ttgcagacat
     3241 aatcatcgtg aacgcgcaga tccaaacgat ggatcggaat caaccgacgg cggaagctgt
     3301 tgctattcat agcaatcgca tcgttgcagt cggctcgact acggacatta agaaactcgc
     3361 aggtagtacc accaaagtga tcgatgcgaa gacacggatg gtcctgcccg gcttcaacga
     3421 tgcgcatgtg catttcctga gtggcggttt tcaactggcg tccgtggact tgcgcgatgc
     3481 gaacacgccg caggagtttg ctgatcgcat ccgcgatttc gccgcgaagc ttccagaggg
     3541 ccgatggatc accggcggcg attgggacca tgaacgttgg cccgatgcga acctgccgac
     3601 taaggagtta atcgaccgtt atacgccgaa cacgccggtg ttcgtgaacc ggcttgatgg
     3661 ccacatgagt ctggcaaaca gtgtcgcgct gaaactcgcc ggtgtgacga gcgcaacgaa
     3721 agacccggat ggcggcgtca tcgtgcgcga tccgaaaacg ggcgaaccaa ccggtgtttt
     3781 aaaagacgct gcgcagagtt ttgtctggaa ggtaattccg ccctcgacat tcgaggagaa
     3841 acttgtcgcc gctcgcgccg ccaccaatca tgccgcgagt ttgggcgtga ccagcgttca
     3901 ggacatgtcc gctggtgttg acgtcggcgt ctaccagaca ttgctcgacc gaggagaact
     3961 aaagacgcgc atttacgccg tctggccttt gccaagctgg gaccgtttgg cgcgcaccgg
     4021 aattcgcgcg cactttggca gtccgatgct gcgcacaggc ggcttgaaag gtttctctga
     4081 cggtagtctc ggctcgacga ctgcgctgtt ctatgagccg taccgcgacg agccaaacac
     4141 gagcgggatc ccgagcgatg aaatgtttcc ggaaagcgca atgcttgaac gcgtccgcgg
     4201 cgccgataaa gcgggactac acgtgatgat tcacgcgatt ggtgaccggg caaacgacat
     4261 gattctctcg atctttgaac aggtcggaaa agaaaacggc gcgcgcgacc ggcggtttcg
     4321 cattgaacac gcgcagcacc tgagaccgca ggacattcca cgtttcgctc gcgacaaggt
     4381 catcgcatcg atgcagcctt atcacgccat cgacgacggc cggtgggccg aaaagcggat
     4441 cggcaaggag cgtgcgaaga ccacctacgc gtttcgttcc ctgctcgatg cgggcgcgac
     4501 tctggcattc gggaccgatt ggacggtcgc gccgctcgat ccgatgttga cgatttacgc
     4561 ggcggtgacg cggcgaactt tggacggcaa gaacccaaac ggctgggttc cggaacagaa
     4621 aatttcggtt caagaaaccg tccgcgctta cacgttcggt tctgcttacg ctgaggctca
     4681 ggagaacgag aaaggaacaa tcacgccggg caagctggcc gatctcgtta ttctctcgcg
     4741 cgacatcttc aaaattgacc caaaagagat tcagaacgtg aaggtagtta tgacgatcat
     4801 ggatggccga attgtttacg aagcacgcct acgataaaac caatacgcca ggtagatcac
     4861 gaacccgacg gccgcggcaa gcgcggcaac tatcgcctcg tacagagtgc tgttgagtaa
     4921 cagccacaca atcagaatca ggcaagctat cgcgatgatg gttccaccac gaacacggaa
     4981 cacggcttcg ggcacgtctt tcttctgtcg cagcacgggc aacgccagac atgtagctgc
     5041 gtaagtcacc agacgcgcaa tcgcgctgat cgtcaacgcc gcgacaaacg aactgtttag
     5101 cgtgaggata aacatgatcg ccgcggtgat caggatggaa acgtgtggag tagaaaaccg
     5161 gcgatggatg gtaccgacga acctgggcaa ctgtttctgt tcggcaatcg cgaacggcac
     5221 gcgcgagccg gacagcaaaa tgatattcag attgccggtg atagaaataa tcgcgcccgc
     5281 ggaaatcagc gcgccgccgg ccgttcccag aaactgctga ccggcgtcag ccaggggttt
     5341 tgtcgaattc gctaagccag gcagtgtgcc gatgctgacg acttgaatca gcacgtagac
     5401 gaccgccacg
//
LOCUS       DATDBY010000208         4391 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2100514, whole genome shotgun sequence.
ACCESSION   DATDBY010000208 DATDBY010000000
VERSION     DATDBY010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4391
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2100514"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..1668)
                     /locus_tag="VIT19_03875"
     CDS             complement(7..1668)
                     /locus_tag="VIT19_03875"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEY5838150.1"
                     /translation="MTRKRLARLAPIEQEVPERAPRGWAEVQQSVAKDSGLALLMVEG
                     YQPPALVVSNNNSICEALQSSPEHVRLCDPFCGLAHKRATNEGAVVHYRCHAGLQCFS
                     LPVEINKRQLAVIGGRAFSSSKDYREFVERVRAGDLQELASDELFRNVIFADEGDLDH
                     AALRLSRAAEEFREKRVEELPVQLPATEEIAAGDEPVPTGEDRRLQRTPYVGLDRRAP
                     FADSIRRFATQIDAAEPSQIYESILAQSADLLDAERSSLWLFDQESNQLNLKAARGIP
                     VGQRDIAAIRVGEGIAGSVISAGQPLVTTIDALGKQSLPERNYKTRSFISYPITIGAR
                     KIGVLNATDRRGGAAYEESDLLVIDLVAPQIALALERATWQHRANQFQLMSITDPLTG
                     LHNRRYMEARLSEELNRSKRYEFPMSLMMIDIDDFKLYNDRNGHQAGDRALEITAQCL
                     RSTLRKADVASRYGGEEFTILLPQTTLKEAGAIADRLRRHVMTTKFPHGDSQPQGAVT
                     ISIGLSSLSSTIDSAEAIIRAADRALYHAKSHGKNRAYAYQGAMS"
     gene            complement(1847..2872)
                     /locus_tag="VIT19_03880"
     CDS             complement(1847..2872)
                     /locus_tag="VIT19_03880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEY5838151.1"
                     /translation="MQPLISIQDLKVHFPVRKSLFSRTRQVVKAVDGVSLDIFEGETL
                     GLVGESGCGKTTLGRAILRLVEPTSGQVLFHGNDLAQLSNRAMREERRHLQIVFQDPY
                     ASLNPRMTVDQIISEPIRTFGLAEGEARKRRVQELMAQVGLSPRFLRRYPHEFSGGQR
                     QRIGIARALAVDPSFIVADEPISALDVSIQSQIMNLLERLRREKNLTYLFISHDLRAV
                     QHVSDRVAVMYLGKIVELAPAKEIYARPLMPYTKALISAVPVPDPKIESSRKRIVLEG
                     DVPSPINPPSGCRFRTRCPYAIEACADVEPQLVQIKPKHFAACIRISPEHPDVERVAP
                     GSAPGLS"
     gene            complement(2872..3870)
                     /locus_tag="VIT19_03885"
     CDS             complement(2872..3870)
                     /locus_tag="VIT19_03885"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5838152.1"
                     /translation="MQPSVPLLRVRDLRTYFHTEDGTVKAVDGVSFEVKRGDTLGIVG
                     ESGSGKTVANLSIMRLISEPPGRIAGGAVEFNGRDVLKLSPRELRDLRGCHIAMIFQD
                     PMTSLNPFMRVSKQLMEVTQLHLRHTKAQARRHAIEMLEHVGIPDAAERIDSYPHEFS
                     GGMRQRVMIAMALSCKPQLLIADEPTTALDVTIQAQILELIKKLKSETGASVILITHD
                     LGVIAGMTDHVVVMYAGKVFEQAPTGELFDRPGNPYTRGLLRSVPDPASEQGKLYQIP
                     GQPPDLAHLPSGCPFAPRCERAEEICTREFPPFVQLTSNHHSLCHFANEVYAEPNR"
     gene            complement(4007..>4391)
                     /locus_tag="VIT19_03890"
     CDS             complement(4007..>4391)
                     /locus_tag="VIT19_03890"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5838153.1"
                     /translation="TMARIVRGQVLSLKNQDFVLAARATGVSTPKIVFRHLVPNVLGP
                     VIVYATLTVPSVMLSEAFLSFLGLGVRPPRVSWGSLAAEGAQHLSVYPWQLIFPGATM
                     ALMLFSLNFLGDGLRDALDPQTRKE"
BASE COUNT          937 a         1266 c         1240 g          948 t
ORIGIN      
        1 tactgattaa ctcatcgcac cctgatatgc gtacgcgcgg ttcttgccgt gactcttcgc
       61 gtgatacaac gcgcggtcgg ctgcccggat aatcgcttcg gcggaatcga ttgtcgaaga
      121 cagcgacgat aggccgatgc taatcgtcac ggcgccctgc ggctgcgaat cgccgtgcgg
      181 aaacttcgtc gtcatgacgt gccgccgcaa gcgatcggcg atggcgccgg cttctttcaa
      241 agtcgtttgc ggcagaagta tcgtgaactc ttcgccgccg tagcgcgacg cgacgtcggc
      301 cttccgcaaa gtcgagcgca ggcactgcgc cgttatttcc agcgcgcgat cgcccgcttg
      361 atgaccgttg cgatcgttgt agagcttgaa atcgtcaatg tcgatcatca tgaggctcat
      421 cggaaactcg taacgcttcg aacgatttag ttcctcagac aaacgggctt ccatgtagcg
      481 gcgattgtgt aaacccgtca gcggatccgt aatcgacatc aactgaaact ggttcgcgcg
      541 gtgttgccag gtggcgcgtt caagtgccag cgcgatttgc ggcgccacga gatcgattac
      601 cagcaggtct gattcctcat aagctgcgcc acctcgtctg tcggtcgcgt tcaggacccc
      661 gatttttcgc gcgccaatgg taatcgggta gctgatgaaa gatctcgttt tgtaattccg
      721 ttccggcaac gactgtttac ccaatgcatc gatcgtggta accaacggtt gtccggcgct
      781 gatcaccgag ccggcaattc cctcacccac gcggatggct gcgatgtcgc gctgaccgac
      841 gggaatgccg cgcgcggctt tgaggtttaa ctggttcgat tcctggtcga acaaccaaag
      901 cgaactgcgt tcggcgtcca gcaagtccgc ggattgcgcc aggatcgatt cgtaaatctg
      961 tgacggctcg gcggcatcaa tctgtgtggc gaagcgtcga atcgaatcag caaatggggc
     1021 gcggcgatcc agacccacgt acggagtacg ttgcaggcgt cggtcttcac ctgttggtac
     1081 cggctcatcg cccgccgcga tttcttctgt cgccggtaat tgtaccggaa gctcctcaac
     1141 ccgtttctcg cgaaactcct ccgccgcgcg gcttagtctt aaggccgcat gatcgaggtc
     1201 accttcgtcc gcgaaaatca cattgcgaaa caattcgtcg gaagctaact cttgcaggtc
     1261 gccggcccgt actcgctcga caaattcgcg ataatccttg ctgctgctga aggcgcggcc
     1321 gccgatcact gcaagctgcc gcttgttaat ctcgaccggc agagaaaagc actgcaatcc
     1381 cgcgtggcat cgatagtgga ccacggcgcc ttcattggtc gctcgtttgt gcgccaatcc
     1441 gcaaaacgga tcacagagtc gcacgtgttc tggggacgac tgcagcgctt cacaaatcga
     1501 gttgttgttc gaaacaacca gtgcaggagg ctggtagcct tcaaccatca acagcgcgag
     1561 tccggaatct ttggcgaccg attgttgcac ttcggcccaa ccgcgtggcg ctcgttccgg
     1621 tacttcctgt tcaatgggcg ccagtcgcgc gagtctcttt cgggtcatcg ggggcttaat
     1681 cttcgctgtt cgtcgccagt atacgtggca cagacttgag tctgtgcatg ctgtcctacc
     1741 aatcacagac tcaagtctgt gccactaact tcaactgatt tcagctcacg gtaaggtaaa
     1801 acgacgaatt ggcccggttt ttcacgcggt ggagacggcc agggtattaa ctcaatcccg
     1861 gcgctgagcc cggcgcgacc cgctcgacat cggggtgttc aggactgatg cgaatgcagg
     1921 cggcaaagtg cttcggcttg atctgcacta gctgtggttc gacatccgca catgcctcga
     1981 ttgcgtacgg acagcgggtg cgaaagcggc agccgctcgg aggattgatc ggcgaaggca
     2041 cgtcgccctc cagcacgatt cgtttgcgcg acgattcaat cttcgggtcg ggaaccggga
     2101 cagccgaaat aagtgccttc gtgtagggca tcagtggtcg cgcgtagatc tctttggcgg
     2161 gcgcgagttc gacgattttc cccaggtaca tcaccgccac gcgatccgag acgtgctgca
     2221 ccgcccgcaa gtcatgcgag atgaaaaggt aagtaagatt cttttcgcgc ctaagccgct
     2281 cgagcaggtt catgatctgg gattggattg aaacgtcgag cgccgaaatt ggctcgtcag
     2341 cgactataaa gctcggatcg accgccagcg cgcgcgcgat tccgattcgt tgccgttggc
     2401 ctccggaaaa ctcgtgcggg taacggcgca aaaaacgcgg gctgagaccg acctgcgcca
     2461 ttaactcctg gacgcgtcgc tttctcgctt cgccttcagc aagtccaaat gtacgaatcg
     2521 gttcgctgat aatttgatcc accgtcatgc gtggattcaa agaagcgtac ggatcctgaa
     2581 aaacaatttg cagatgacgt cgctcttcgc gcatggcgcg gttcgacagc tgcgccaggt
     2641 cgttgccgtg gaacaggacc tgaccggagg ttggctcaac gagccgcaga attgcgcggc
     2701 cgagggtcgt tttcccgcag ccggattcgc cgactaatcc aagcgtctca ccttcgaaaa
     2761 tgtccaacga caccccatcg accgccttaa cgacctggcg cgttcgactg aagagcgact
     2821 tgcgcacggg aaagtgcacc ttgagatcct gaattgagat caatggctgc atcagcgatt
     2881 cggttcggcg tagacctcgt tcgcgaaatg gcagagcgag tggtgattgc tcgtgagctg
     2941 aacgaacggg ggaaactccc gcgtacagat ttcttccgcg cgttcacagc gcggcgcgaa
     3001 aggacacccg gacggcaaat gcgccaggtc cggcggctga ccagggattt gatagagctt
     3061 tccctgttcc gaagccggat cgggaacgga acgtaacaga ccgcgcgtgt agggattgcc
     3121 cgggcgatca aacagctcgc cggttggagc ctgctcgaaa acctttccgg cgtacatcac
     3181 gacaacgtga tcggtcatgc cggcgatgac gcccaggtcg tgagtgatca agattacgct
     3241 cgcgccggtt tcactcttta gtttcttgat gagttcgaga atctgcgcct gaatcgtgac
     3301 atccagcgcg gtggtcggct cgtcagcgat tagcaactgc ggcttgcaag acagcgccat
     3361 cgcgatcatc acgcgctgac gcataccgcc tgagaattcg tgcggataac tgtcgattcg
     3421 ttcggcggca tcgggaatac caacgtgctc aagcatctcg atcgcgtgac gccgtgcctg
     3481 cgctttggtg tgccggaggt gaagctgggt tacctccatc aactgtttcg acacgcgcat
     3541 aaacggattc aaagacgtca tcggatcctg gaaaatcatc gcgatgtggc agccgcgaag
     3601 atcgcgcaac tcacggggcg acagcttcaa aacatcgcgg ccattgaatt cgactgcccc
     3661 gccggcaatt cgccccggcg gttcggatat caaacgcatg attgaaaggt tcgccacggt
     3721 cttgccggag ccagattcac cgacaatacc cagtgtgtcg ccgcgcttta cttcaaagct
     3781 aacgccgtcg acggctttca ccgtgccgtc ttcggtgtga aagtacgtgc ggagatctct
     3841 gactcttagt agtggtacac ttggctgcat cgtagtgttg ggacttgtac tttgtactta
     3901 gtgctttgta ctttgacgtg ttggccaaat agctcctgcc atcagaagcc aaaatgccaa
     3961 gtagcaagaa caaagcacta agttacaaag tacaaagcac aaatttctat tctttcctgg
     4021 tctgcggatc gagcgcgtcg cgcaaaccat ctccaagaaa attcaaactg aacaacatca
     4081 gcgccatcgt ggctcccgga aagatcaact gccacggata gaccgacagg tgttgtgcgc
     4141 cttcggcggc caggctgccc cacgagactc tgggcggccg cacgccgagt ccaagaaatg
     4201 acaggaacgc ttcgctgagc attaccgacg gcaccgtaag cgtcgcgtac acgatcaccg
     4261 gcccaagcac gttcggaaca agatgtcgaa agactatttt tggcgtcgag actcccgtcg
     4321 ctcgcgcggc caaaacgaaa tcctgattct ttaacgacag cacctggccg cggacaattc
     4381 gtgccatggt c
//
LOCUS       DATDBY010000209         7288 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_974929, whole genome shotgun sequence.
ACCESSION   DATDBY010000209 DATDBY010000000
VERSION     DATDBY010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 7288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7288
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_974929"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="VIT19_03895"
     CDS             <1..267
                     /locus_tag="VIT19_03895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838154.1"
                     /translation="CKGIWLDRNEWEALKKRNLHDDLHGIFTQFWQAGAQREQRKKRL
                     QQIYVDRFGEEDYKEINRIRHWLDTKTNRVELIAYLTDKDPYEV"
     gene            345..713
                     /locus_tag="VIT19_03900"
     CDS             345..713
                     /locus_tag="VIT19_03900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838155.1"
                     /translation="MKRKTAYFTLLTLLIVSVIGCSGLKTSRTTSGFHHGSVIRGEQA
                     RHKVTVKADQTLDVNITSDEDNAVFQIYLPGEKGTLPGAGEMDDAKNFSGKVPSAGDY
                     IVVVSATRGNATYKLTYTLK"
     gene            710..1411
                     /locus_tag="VIT19_03905"
     CDS             710..1411
                     /locus_tag="VIT19_03905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838156.1"
                     /translation="MKRIVFRSIAIVLTLVVGALLYDLYYPRSAKMREFDPNQVARLE
                     TAMWRSYYDKKQVQLFNQLSELLRTQYHIPLVRSNQVAYYAANAAFAFKDGKTQADYE
                     KALPELVKFYGAIRKISDIPFDVDRVARLELQWWIVHRERWKRGAEELPRALAELQSA
                     IYGVPVEQVLEHGRLRAEAMKIRDTKAENGAAMTEEDWSKITELLRKSWHSLAVAVKT
                     STNLTPPNNQANGSH"
     gene            complement(1311..3212)
                     /locus_tag="VIT19_03910"
     CDS             complement(1311..3212)
                     /locus_tag="VIT19_03910"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5838157.1"
                     /translation="MNLAQKLMRTVFCLALIAFAVTEANAQAWSAKLDETIRFYQTTD
                     VGAIIVGTKKSVYAVDGATGDVLWRRKDAAMDENEIAPVPGTDLVLLSFEKDKRTRIE
                     ATDILSGDAIWQSEKLKGAVMQMAVDIDGNLLAVVLARDAKGKASSGLKRKAMVHVLD
                     LSTGDEIWKHELGSEIEMMPTRWSENEDVGFTLDNYHPPMFISGRLYLFYEGATSFEA
                     RNGKERAREKYKVNEGGLALTESPPVGDEAFIYTSGRGHVRAIRRDSGEVEWEAKDIG
                     MTPELVLAGRVIYARTGGQFTRLKDGETVERGPYGVSAIDSRTGKILWRYKGADKGIT
                     NIVLPDASTIVIADRDDVILVETANGKRRSHAPHKIKGAAFALLNERNEVVIGGREEI
                     AAFEHASGRSVWRAKYPPPGRGLLRTIAAVAARAASIYFRYGGVATTAFRGVQIARGL
                     SSLSSSLSWSGLTGRSSFSNLQALATNSARSYVTNRFRAFGVASRMRPNMPNIAVRER
                     LTRRPSVNIEERLLDRLDPARQLERLSRFLWHRERLAALRGDRMYFYTDLKGVDGNGL
                     AGVNIHTGATDRAIRIKDLDERFVTDEVVGILFSASGNRLLGYSVASGSSKFSLRQPV
                     NAMTSAATR"
     gene            complement(3356..3772)
                     /locus_tag="VIT19_03915"
     CDS             complement(3356..3772)
                     /locus_tag="VIT19_03915"
                     /inference="COORDINATES: protein motif:HMM:NF042760.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEY5838158.1"
                     /translation="MPRHKFATAITCIDGRVQQPVADWMKLNTNVEYVDLITEPGPDK
                     VLSEESTYVVDEIIRKVSFSVKYHESPVVALCGHHDCAANHADREEHVEQILEGVRVL
                     ISYNLGVRVLGLWLNEWGSVELVWDSQEREAASGSL"
     gene            complement(3982..6705)
                     /locus_tag="VIT19_03920"
     CDS             complement(3982..6705)
                     /locus_tag="VIT19_03920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838159.1"
                     /translation="MLRPVMLYGLLLLAGQSACPSSPIESRAPALPDAKASVDSGATN
                     AGRVRSITVNPTTRNHAIIAMDFGGLWKTHSGGSQWLRIDGLPAVFVTDVEFSADGKT
                     VVAAVFRDNRTMNGGGIYVSRDGGDVWVRPPTGIVPASNRTPTRTSAYSVSRSPDQAG
                     LWYVGTDYGIAKSSDNGATWTHHSLEPCVSATNPVTMVERDKQQDAAQSVLAMPNRTV
                     LAMTRTAVCRSDFFGLSGWRVIINDNFRHQGPASGAPGNGNNKMDRSPFAANSPLTFI
                     FKDYSPTGGNIFYYELDTGLVKALQIPQGVSRGPFVRVSKPNPPEGNTITVWVGAGWD
                     GYFVTRATSASFRDLQVSDWTSFIKTAGIHSDMGDMGVDGNFQPTLMGTDGGIYKPHR
                     TIPGRWMNAAVPGSGMNSLLITSLAGTNPIEGATGTTKAPLYFATQDNSVWASPDEGQ
                     TWPKHEGGEGFGLQVTYEARIGTPVTVAFVSVPGGEPSRFTDAVFANSRTIPNLDQNG
                     QPLDKLKQAFLLRRDDYPTLKPSAWVRLRTADSGGEEIYVSENDGANWTKTGQIGFEW
                     AGGIKRSAGGAVVWMPVKYKSLWGTRIGLIVHTAKLGLPMRTYGYNDIVFPTDYGGMG
                     QRATEFDWQAVFGVHPGDWQHLIVPDVRENNIKVTRDGGRTWIVDAALTAQVLRGGEL
                     KLYDDSPYWMHVTEIAFDPYSRPGTRIFIGTRDAGIICSADNGRNWSTIRNSDQIKYI
                     TGFHFLRNGGVYVSSYGHGLWFVKPTNGCPESYKLPWDRRQPVLDADVKAAEIRKEFP
                     TPPTGTGDAGHPQLFLKGTIMASGIAIVGTDNTLTIAGRNFPAGSEVTLLLKGSNILN
                     QKVRVNSDGTFSTTVRFSGDLQFGTHNIEVAGDPKSPALAVADFVKPYVGK"
BASE COUNT         1578 a         2072 c         1991 g         1647 t
ORIGIN      
        1 tgcaaaggaa tctggctgga tcggaatgaa tgggaagcgc tgaagaagcg caacctgcac
       61 gacgatctac acggcatctt tactcagttc tggcaagcgg gcgcgcaacg cgagcagcga
      121 aagaagcgtc tgcagcaaat ctatgttgat aggttcggcg aagaagacta caaagaaatt
      181 aaccgcatcc ggcattggct ggacactaag acaaatcgtg tagagttgat tgcatatctg
      241 accgacaagg atccgtacga ggtgtgagat ttgcattcgg tacgcaggcc gctgggctgc
      301 tcaaagcacg cctgaggcgt gcgtaccgcg tcgaaagaga ccatatgaaa cgaaaaacag
      361 cttacttcac cttactgaca ctgctaattg tttccgtgat tggttgtagt ggattgaaaa
      421 cctccaggac gactagcggc ttccaccatg gctcagtcat acgcggcgag caagcccggc
      481 ataaagtgac cgtcaaggcc gatcaaaccc tcgatgtgaa cattacatcc gacgaagaca
      541 atgcggtatt tcaaatctat ttgcccggcg agaaaggcac gcttcccggc gccggcgaga
      601 tggatgatgc gaagaacttc tcgggtaagg ttccctccgc cggggactac attgttgtag
      661 tcagcgcgac gcgaggaaac gccacgtaca agcttactta cacacttaaa tgaaacgcat
      721 agtgtttcgt tcgattgcca tcgtactgac gttggtggtc ggggcgctgc tgtacgatct
      781 gtattacccg cgcagcgcga agatgcgcga gttcgatccg aaccaggtcg cgcggctcga
      841 gacggcgatg tggcgttcgt actacgacaa gaagcaggtg cagcttttca atcagttgtc
      901 ggaattgctg cgcacgcaat atcacattcc gctggtccgc tcgaaccagg ttgcctacta
      961 cgccgccaat gcggctttcg ctttcaaaga cggcaagact caggctgatt atgaaaaggc
     1021 tttgcctgag ttggtgaagt tctacggcgc aattcgcaag ataagcgaca ttccgttcga
     1081 cgtcgatcgc gtcgcgcgcc tggaactgca atggtggatt gttcatcgcg agcgctggaa
     1141 acgcggagcc gaagagctgc cgcgcgcgct cgcggaactt cagtcagcga tttatggagt
     1201 accggttgaa caagtgttgg agcacggccg gctgcgcgcg gaggcgatga agattcgcga
     1261 tacgaaagcg gaaaacggcg ccgccatgac cgaagaagat tggtcgaaga ttaccgagtt
     1321 gctgcggaag tcatggcatt cactggctgt cgcagtgaaa acttcgacga acctgacgcc
     1381 accgaataac caagcaaacg gttcccacta gccgaaaaca ggatccccac aacttcatcc
     1441 gtgacgaacc gctcgtccag gtcttttatg cgaatggcgc ggtcagtcgc acccgtgtga
     1501 atgttaacgc cggccaatcc gtttccatcg acgcctttga gatcggtgta gaaatacatc
     1561 cggtcgccac gcagcgccgc caaacgctcg cgatgccaca ggaaccgcga tagccgttca
     1621 agctgccgcg ccggatcgag acgatccagc aggcgttctt cgatattcac tgaaggtcgt
     1681 ctcgttaaac gctcgcgcac agcgatgttt ggcatgtttg gccgcattcg agatgccacg
     1741 ccgaacgccc ggaaccgatt cgtcacgtat gaacgcgctg agttcgtggc cagagcctgc
     1801 aagttggaaa acgatgagcg gcccgtcaat ccggaccaac ttaaagacga actcagggaa
     1861 gacaagccgc gagcgatctg cacgccgcga aatgcggtcg tcgcgacccc accgtagcgg
     1921 aagtaaatcg acgccgcgcg cgccgccacc gcggcgatcg tgcgcaagag acctcggccc
     1981 ggcggcgggt actttgcccg ccagacgctt cgaccggatg cgtgctcgaa cgcggcgatc
     2041 tcttcacgtc cgccgataac aacttcgttc cgttcgttca gaagcgcgaa tgcagcgcct
     2101 ttgattttgt gcggtgcgtg actgcgtcgc ttgccgtttg cggtctcaac caggatcacg
     2161 tcgtcgcgat cggcgatcac aatcgtgctc gcgtccggca ggacgatgtt tgtgattccc
     2221 ttatccgcgc ctttgtaccg ccaaaggatc tttccggtcc gtgaatcgat cgcactgacg
     2281 ccgtagggcc cgcgctcgac agtttcgcca tccttcaaac gcgtgaactg accgccggtg
     2341 cgcgcgtaga tgacgcggcc cgcgagcaca agttccggcg tcatcccaat atctttcgct
     2401 tcccattcga cttcaccgct gtcgcgacga atggcgcgta catggccgcg gcccgacgtg
     2461 taaatgaacg cttcatcacc gactggcgga ctttccgtta acgccaatcc accttcgttt
     2521 actttgtatt tctcgcgcgc gcgttctttg ccgttgcgcg cttcgaacga agtcgcgcct
     2581 tcataaaaca agtagaggcg gccgctgatg aacatcggcg gatgataatt gtcgagcgtg
     2641 aatccaacgt cttcgttttc gctccaacgc gtgggcatca tctcgatttc gctgcctagt
     2701 tcatgtttcc aaatctcatc gccggtcgat agatcgagca catgaaccat cgcctttcgt
     2761 ttcagcccgc tgctcgcctt ccctttcgcg tccctcgcga gcactaccgc cagcaggttg
     2821 ccgtcgatgt ccacggccat ctgcatgacc gcgcccttca acttctcgct ctgccaaatt
     2881 gcatcgccag acagaatgtc ggtggcttcg atgcgcgtgc gcttgtcttt ctcaaagctg
     2941 agcagcacta gatccgttcc cggcaccggc gcaatctcgt tttcatccat cgctgcgtct
     3001 ttccgccgcc ataggacgtc tccggtggcg ccatccaccg cgtagacaga tttcttcgtg
     3061 ccgacaatga tcgcgccgac atcggttgtc tgatagaagc gaatggtttc gtcgagtttg
     3121 gccgaccagg cctgcgcgtt cgcctcagtc acggcgaatg cgattaaggc gaggcagaaa
     3181 acggtgcgca ttagtttctg agcgaggttc atggctgctt tagtttaagt ccaaaggaga
     3241 gatgagggcg aggcgttggg aacgcggacg ccctcgtccg ctttcctaat tcatccaaag
     3301 acctggtttt gagcaacaat ttgcggacga ggcgtccgcg ttcccaggcg ccggatcaca
     3361 agctgcctga ggcggcttcg cgctcctgac tgtcccagac caattcgacc gaaccccatt
     3421 cgttcagcca cagcccgagg actcgcacgc ccaggttgta cgagatcagc acgcgcacac
     3481 cttcaagtat ttgttcgacg tgctcttcgc gatcggcgtg gttggcggcg cagtcgtgat
     3541 gaccgcaaag cgccacgaca ggagactcat gatacttcac ggaaaagctg actttccgga
     3601 tgatttcatc gactacgtaa gttgattcct cgcttaggac tttgtcggga cccggctcag
     3661 taatcagatc gacatattcg acgttcgtgt tcagcttcat ccagtcggcg actggttgct
     3721 ggacgcgtcc gtcaatgcag gtgatggcgg tggcgaattt gtgacgaggc atgcgattcg
     3781 actaaaaaag caattgtact tgggaagaga taatgatcaa cttggcaagc ggaagtaagg
     3841 ggtgggacaa attctggaga ttagggcgac tctcagggcg gagcactagc ccgaccgtta
     3901 gtgagggctc ccaatgcgcg acctaatgag ccctctctga cggtcgggct attgccccga
     3961 acccgcccac gcacgaatcc attacttacc gacataaggt ttaacaaaat ccgcaaccgc
     4021 gagtgccgga gacttggggt cgccggccac ctcgatgttg tgggtaccga attgcagatc
     4081 acccgaaaag cgtacggtcg tcgaaaacgt gccgtcgctg ttaacgcgca ctttctgatt
     4141 gagtatgtta ctgcctttaa gtaacagggt gacttcgctt cctgcgggaa agttgcggcc
     4201 cgctatcgtg agcgtgttgt ccgtgccaac aatagcaatg ccactcgcca tgattgttcc
     4261 cttaagaaag agctgtggat gacctgcgtc gccggttcct gtcggcggcg ttgggaactc
     4321 cttcctgatt tcggcggctt tgacatcggc atcgagaaca ggctgccttc tgtcccacgg
     4381 taatttgtaa ctctcgggac atccgttcgt tggcttcaca aaccagagac cgtggccgta
     4441 actggaaaca tacacaccac cgtttcgcag aaaatgaaaa ccggtgatgt acttgatctg
     4501 gtccgaattc ctaatcgtgg accagtttcg accgttgtcc gcgctgcaaa taatgccggc
     4561 gtcgcgcgtg ccaatgaaga tccgcgtgcc tggtcgggaa tacggatcaa acgcgatctc
     4621 agtgacatgc atccagtacg gactgtcgtc atacagtttt agctcgccac cgcggagcac
     4681 ctgagcggtt agcgcagcgt caacaatcca agtccttccg ccgtcgcggg ttaccttgat
     4741 gttattttct ctaacgtcgg ggacgatcag atgttgccag tcaccaggat gaaccccaaa
     4801 gaccgcttgc caatcaaatt cggtcgcgcg ttggcccatc ccgccataat ccgtggggaa
     4861 gactatgtcg ttatagccgt aggttcgcat cgggagtccc agtttcgcag tgtggacgat
     4921 taggccgatc cgcgtacccc acaaactctt gtattttacg ggcatccaaa cgaccgcgcc
     4981 gcccgcgctg cgctttatgc ctccggccca ctcgaaacct atctgtcccg tcttagtcca
     5041 atttgcaccg tcattttcgg aaacgtagat ttcttctcct ccggagtcag cagttcgcaa
     5101 gcgcacccag gcgcttggtt ttaaggttgg atagtcgtct cgcctaagca ggaaggcctg
     5161 tttcaattta tcaagtggtt ggccgttctg atccagattc ggtatggttc gcgagttcgc
     5221 gaaaactgcg tcagtgaatc gtgaaggctc gcctccggga acagaaacga acgctaccgt
     5281 tacgggcgtt ccaattctcg cctcgtacgt aacctgcaat ccaaatccct cgccgccctc
     5341 atgctttggc caggtctgac cctcgtctgg cgaggcccac acagaattgt cctgcgttgc
     5401 aaagtaaagt ggtgctttag ttgttccggt ggccccttcg atcggatttg ttcccgccag
     5461 gctggtaatg agaagcgagt tcataccgct acccggtacc gcagcgttca tccatcggcc
     5521 tgggatagtc cggtgcggct tataaattcc gccatcagtt cccatgagtg tcggttgaaa
     5581 gttaccgtca acgcccatgt cacccatatc ggagtgaatg cccgctgtct tgatgaaact
     5641 ggtccagtca ctcacctgga ggtcacggaa cgatgccgag gtcgcgcgcg tcacaaaata
     5701 gccgtcccat ccggccccaa cccagaccgt gatggtgttg ccttccggag gattgggctt
     5761 cgaaacgcgc acgaatggtc cacgggagac tccctgcggt atctgcagcg ccttgaccaa
     5821 gcctgtatcg agttcgtaat aaaaaatgtt accgcccgtc gggctgtagt ccttaaagat
     5881 gaaggttaag ggagagttcg ccgcgaatgg tgaacggtcc attttgttgt tgccgttccc
     5941 cggcgctcca gatgccggac cctgatgtcg gaagttgtca ttgatgatga cgcgccatcc
     6001 ggacagtccg aaaaaatcgc tgcgacacac tgctgtgcgg gtcatcgcta gtaccgtccg
     6061 gttcggcatc gcgagcacag actgcgcggc atcctgttgt ttatcccttt caaccatcgt
     6121 taccggattc gtcgcgctaa cgcatggttc caaactgtgg tgggtccatg ttgccccgtt
     6181 gtcgctgctc ttagcgatgc cgtaatcagt gccgacatac caaagaccgg cctggtccgg
     6241 tgagcgggat accgaatatg cgctggtcct tgtcggagtt cggtttgagg ccggaacgat
     6301 gcccgtgggc gggcgcaccc aaacatcccc gccgtcacga ctaacgtaaa tcccgcctcc
     6361 gttcatagtc cgattgtccc gaaagactgc ggcgacgacg gtcttcccgt ccgcactaaa
     6421 ttcgacatcc gttacaaaca cggcgggaag accgtcgatg cggagccatt gactaccgcc
     6481 actatgcgtt ttccatagcc ccccaaaatc cattgcgata attgcatggt tcctggtggt
     6541 cggattcacg gtaatcgagc gaactcggcc cgcgttagtt gcaccactgt caacgctcgc
     6601 tttcgcgtcg ggcagcgcgg gcgccctcga ctcaatcggt gaagaaggac atgcagattg
     6661 gcctgcaagc agcagaaggc cgtaaagcat taccggacgc aacatgattt tctcctttca
     6721 ctaagcagca aatcgcgtta cctggagcgt taactgaagg tcttgcagtg cgtattaatt
     6781 ctgagtttta agaccctcta gtactgatgc gacatactga cgaaatattt cattggagtg
     6841 tgcgctttcg gggaaaagca gccggctgga tatcaaacgc gatgagacat gacactgtaa
     6901 tcaatacgag cctgggttct cgttctggtt acctggattg ttcgtttttc tggagtcgag
     6961 agagccccgg ctggcgagca ttgggtcact tacgttccca ctaaggcaag cttcgattaa
     7021 accgaaaccg cgagattcga tccagattgg ctatttgtgc agagtgcgca ggtcgagcgc
     7081 cggataatga tcatttccac ctattgacat tggtttgagg atcatccggc ccgatttaag
     7141 gttgaggatt cagtttatcg atctctttct cgatcattgg attcagccgc agccgtaatc
     7201 tctgagccag cgcgtcagcc tggcgaactt cttcttccag gcgcgtgcgg ccgtcagttg
     7261 ccagcgcgag caagctcaca tagccgcg
//
LOCUS       DATDBY010000210         2137 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1465459, whole genome shotgun sequence.
ACCESSION   DATDBY010000210 DATDBY010000000
VERSION     DATDBY010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2137
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1465459"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..707)
                     /locus_tag="VIT19_03925"
     CDS             complement(<1..707)
                     /locus_tag="VIT19_03925"
                     /inference="COORDINATES: protein motif:HMM:NF017633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HEY5838160.1"
                     /translation="MDDATIAAIVSEMAPLITGRALGKIFQLTHQSLAIDFGLREHGY
                     LFITVEPAAPGLYLIKRRVRDLEKASVPTTQFALSLRKELARKTVTNVEKLSTDRVVT
                     LSFEGSDDLGQQTNPALIAQLTGRSANLFLLNDEGVITGRLKETKGVGQTVGEKYQPP
                     RSGATHSAAKSSVRSQGLGDRESLSDALDQHYTSLEESRGLESQLAAARSELQKEISR
                     RRKLLKKLERDLEEHSGA"
     gene            complement(867..1940)
                     /locus_tag="VIT19_03930"
     CDS             complement(867..1940)
                     /locus_tag="VIT19_03930"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEY5838161.1"
                     /translation="MQKTLTEPSNQAGVTIASHTTTRPSNQPTEAESNSTLIEFPGAR
                     SIPEWRKRLSQRVREVQELKAREAAEEEALLRAAETVSCSLPSGQLELVPDVAQAPLN
                     PIVSKALERVDRARRAEHLSTGVRATAAAPALAPIEEETPAPLAAPIESKPKLTIVAS
                     TVEPEPVELAADDELAITPVVATEELAEKPKRVKVISASVEDAALSYLETCLSVPAHS
                     ADTRKDMPGLTRRAFVGLIDLLLIALMVSPAVAALKAAAVDWSNPRIVGLMVGITAAT
                     MFTYLTISIALTGRTLAMRLLRVRTIDERTGLIPTGGQSSKRALGYIVSLAPVGLGLA
                     FAFIDRDNRPLHDRFSKTLVIRN"
BASE COUNT          433 a          602 c          634 g          468 t
ORIGIN      
        1 gcgcctgaat gttcctcgag gtcgcgctcg agcttcttca gcagtttcct gcgtcgcgaa
       61 atttcttttt gaagttcgga gcgcgcggcc gcgagttgtg actctaaccc gcgactctcc
      121 tcgagtgagg tgtaatgctg atcgagcgca tccgacaatg actcgcggtc acccaggccc
      181 tgacttctaa cactggattt cgcggcgctg tgagtggcgc cgctcctcgg tggctgatac
      241 ttctcaccga cggtttgtcc aacgcctttg gtttctttga ggcgtccggt gatgacacct
      301 tcgtcgttca atagaaagag gtttgcggat cgacccgtca gttgcgcaat cagcgcgggg
      361 ttcgtttgct gacccaggtc atctgagccc tcgaagctga gcgttacaac gcgatcggtc
      421 gacagcttct cgacgttcgt cacggtcttg cgcgccagct cttttcgcag gctcaaagcg
      481 aattgcgtcg ttggcactga agccttttcc aaatctcgga cgcgtcgctt gatcaggtac
      541 agacccggag cggccggctc gacggttatg aaaagatacc cgtgttcacg aaggccgaaa
      601 tcaattgcca gcgattggtg cgtaagttgg aagatctttc ccagggcgcg gccggtgatt
      661 agaggcgcca tctcagaaac tatggcggcg atagtcgcgt cgtccatcga gcggtgaagg
      721 tatcacaaga cgggactacg ctcgtcagta cggcggcgac tggagcgcgg gcatcctgcc
      781 cgcaaagcgc cgacaggcgc ttgatttctg ttcgcgcttc gcgctcaggc gggcaaggat
      841 gcccgcgctc ccaggcgcac tccaaattaa ttacgaatga cgagggtctt ggaaaagcga
      901 tcgtgaagcg gccggttgtc gcggtcgatg aatgcgaacg cgagccccag gccgacggga
      961 gccagtgaga caatgtaacc gagcgcgcgt ttgctagatt gaccgccggt tgggatgagc
     1021 cccgtgcgct cgtctatcgt cctgacgcgc aacagccgca tggccagagt gcgtccggtt
     1081 aatgcaattg agatggtgag ataagtaaac atcgtcgcgg ctgtgattcc gaccatcagg
     1141 ccgacgatgc gcggatttga ccagtcgacc gcggcagctt taagggctgc taccgccggt
     1201 gaaaccatca gcgctatcag cagtagatcg atcaaaccga caaacgcgcg ccgcgttaga
     1261 cccggcatgt ctttgcgtgt gtcagctgaa tgggccggca ctgacagaca ggtttcgaga
     1321 taagacaagg ctgcgtcttc gacgctggcc gaaatcactt tcacacgctt cggcttttca
     1381 gccagttctt cagtggcaac aactggagtg attgccaact catcatccgc cgcaagctca
     1441 acgggttcag gctcgacggt ggaagcaacg attgtcagtt taggtttcga ctcaatcggt
     1501 gcggcgagtg gtgcgggtgt ttcttcctca atcggcgcaa gcgcgggcgc cgctgctgtc
     1561 gctcgaactc cggtcgagag atgctcagca cgccgggcgc gatccacgcg ctctaaagcc
     1621 ttcgacacaa tgggattcaa tggcgcttgc gcgacatcgg gaaccagttc aagttgccct
     1681 gagggtagtg agcacgaaac cgtttcggcc gcgcgcaaca acgcttcctc ttcggcggct
     1741 tcgcgagctt tcagttcctg gacctcgcgc acgcgctgac tcaggcgttt tcgccactca
     1801 ggaatgcttc gcgcaccggg gaattcaatc aaggttgaat tcgactcggc ctcagtaggt
     1861 tgatttgatg gtcgcgtcgt cgtgtgactc gcgattgtga cgcctgcctg attcgacggt
     1921 tcggtcagag ttttctgcat tttgagggac ctgagacgtt atggggcagg accaaaactc
     1981 ctcttagtac gtccagcatc gcggcaacac ccgcgatgca acacgaaacc ggacgggcaa
     2041 aggtgggcag cccaaacccg caaccgtttt cgccgccgat actaacagtt gtactttaag
     2101 tcgtcaatca gaaaatatag cagccgttag agttggg
//
LOCUS       DATDBY010000211         6691 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_70264, whole genome shotgun sequence.
ACCESSION   DATDBY010000211 DATDBY010000000
VERSION     DATDBY010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6691
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70264"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VIT19_03935"
     CDS             complement(<1..500)
                     /locus_tag="VIT19_03935"
                     /inference="COORDINATES: protein motif:HMM:NF019241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEY5838162.1"
                     /translation="MNEVGQAFISEARSLLLTDYLPKIEQCAALLSDEQIWWRANPES
                     NSIGNLLLHLSGNVRQWIVVGLGGSPDERDRDAEFAQREVVPRDELIRRLRQTLNEVD
                     ATLTAFDANRLLDRFTIQKSDVSALAAIFHVIEHFSMHTGQIIMLTKMFAAIDLEFYD
                     FKDGAP"
     gene            complement(779..1000)
                     /locus_tag="VIT19_03940"
     CDS             complement(779..1000)
                     /locus_tag="VIT19_03940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838163.1"
                     /translation="MSEKRVVKVIKREERVLNKPNRRSARQNKRKTPTDMVSTVGGWV
                     NDFQKRQREETSIAIESLIRARQQQPNEA"
     gene            complement(1211..1951)
                     /locus_tag="VIT19_03945"
     CDS             complement(1211..1951)
                     /locus_tag="VIT19_03945"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEY5838164.1"
                     /translation="MPGEAAATVVNETHLPDWSARVYGKQKFAGAGKSNSGLLVPLER
                     RLARVVLPRIPSWIETYHLTLLTPLWSLGIVGFCYLAKFNLRWLWMVNLMMVLHYFTD
                     HFDGKLGKYRDTGLCKWGFYMDHLFDYGFLCSILLGYTLLIPERAFFNMLLVLCVFSA
                     FMFHTYLMLATTEEFKVSFSRFGPTEMRIGLIIINALLVKFGTRPLKGALPYVAIGGV
                     IVLGILAYRAQKKLWRVDMAAKHGSARA"
     gene            complement(2176..2448)
                     /locus_tag="VIT19_03950"
     CDS             complement(2176..2448)
                     /locus_tag="VIT19_03950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838165.1"
                     /translation="MRESDFFNEKQETKRASFVCPHCRERGDYDVRWLTRRKKPAPPR
                     GMNEDQRAQFAKSRDYMVRVDDMLACRNMRCRKRFEIPSSQSVVFI"
     gene            complement(2448..2834)
                     /locus_tag="VIT19_03955"
     CDS             complement(2448..2834)
                     /locus_tag="VIT19_03955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838166.1"
                     /translation="MTQNILFVGGAHLDGSVRHRLEQNGFAVLSVTDSALAIEALTDS
                     FIDLVIVELDKRENGPDLIRQVREVLGTKATGVLAVAEWGTGLPSIALAAGADAYEPA
                     PIDPERLIDAVQRVLHKRAAVVGMNK"
     gene            complement(2899..3219)
                     /locus_tag="VIT19_03960"
     CDS             complement(2899..3219)
                     /locus_tag="VIT19_03960"
                     /inference="COORDINATES: protein motif:HMM:NF017922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEY5838167.1"
                     /translation="MIDAAQKRQTIEPTEISQESNSRLRITWADGRVCEYEAPMLRRA
                     CPCAQCVDEWTGQRTLRPQAVSDEIEIGDLSIVGRYALNFRWSDGHETGIYSFQYLRD
                     LCER"
     gene            complement(3273..3611)
                     /gene="ytxJ"
                     /locus_tag="VIT19_03965"
     CDS             complement(3273..3611)
                     /gene="ytxJ"
                     /locus_tag="VIT19_03965"
                     /inference="COORDINATES: protein motif:HMM:TIGR04019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol system redox-active protein YtxJ"
                     /protein_id="HEY5838168.1"
                     /translation="MKEIGFMELNDTQRLDELLGQSGEQPVILFKHSDTCGISARAYR
                     EMTKLEKRVALVTVQKARALSNEIETRFALPHETPQVLVVRDGKLAWSASHFRITAEA
                     VTRAVEEATQ"
     gene            3790..6270
                     /locus_tag="VIT19_03970"
     CDS             3790..6270
                     /locus_tag="VIT19_03970"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HEY5838169.1"
                     /translation="MKAAFPLRITILIVLFVFTVISSGFVYAQKRRNAQPRGQSRAAV
                     LVDEADKLADDRKWSEATDAYKLAIRVDPNYAPAHGGLGHAYLNAGNPEQALIAFKEQ
                     VRLAPNDSEAQFDLGYYYNFMGRHGEAFAPLVRASQLDPTFAEAFYEIGYAYLRGEDF
                     NKSIGFFRSAIRLKPDYAEAHLGLGQVYAKQGKTELANEQIRKLNSLDPKLARRLEKE
                     MQTAPATSTSITSSQPAPTVTTASPPVQAAPPAAETTQSQNPPSPTTATTRPEGSTAP
                     TVTEPTSRQLQQIPTAPAQESTTSPSVTQTGQINSLPIGPKRWALVIGVDKYQDPQIS
                     PLKGSDNDARLIADALVRYAGFPKDQVILLSTDQPLERQPTRVNILRRLSNLSTAVPK
                     DGLLVISFAGHGMERGGHAFLLPSDAQISDQISFLEETAISTNRVKDRIKETGVSQVV
                     LLLDACRNDPGGRADAPNPLTNAYTNAFNFDVRNREVQAFATVYATGIGQRAYEYTEK
                     KQGYFSWALVEGLKGAAANEKGEVTLSQLVKFVQDTVPKRLAIDLGSTKQQKPFAVIE
                     GYRADELVVAVTNSASMASSATTPNVQTVDPAALELSFWDTIKNSNNPDDFKAYLDKY
                     PDGQFAALARSRSQATRTMGNTGGGDSMEMVYWNAIKDSRNPSDFRGYVTKFPGGLFV
                     ELANNRIASLEAEGRDAARAKEVAAEEERRRNTRIFEVKDAGGTEGSLTVTPGKLAFE
                     PKKTNPKKNMAIECTQIKRIEAGKSVYQPPHVNIYLAALPGAKERTVVYYTASGGTGL
                     FVKTPVVDITSNVIDGVVNACKMVRMNQ"
     gene            6296..>6691
                     /locus_tag="VIT19_03975"
     CDS             6296..>6691
                     /locus_tag="VIT19_03975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838170.1"
                     /translation="MTTKDQANSAAPGSSDTGAAFDHPTSDAVAPTLTVGEGLGRAPL
                     AETSLFPSESLLEATIDNRYFVEKELGRGGVGVVYLARDRKLHDKAVVIKVLLEKSLQ
                     NSWVVQKFQQEKEALARVDHPGVVGILDNG"
BASE COUNT         1543 a         1921 c         1824 g         1403 t
ORIGIN      
        1 atcggcgccc cgtctttgaa gtcgtagaat tcgagatcga tggccgcgaa cattttcgtc
       61 agcatgatga tttgaccggt gtgcatcgaa aaatgttcga tcacgtggaa gattgccgcc
      121 aacgccgaca cgtcggactt ctgaatggtg aagcgatcca gcaatcggtt ggcatcaaac
      181 gccgtcaacg tcgcgtcaac ttcgttcaga gtttgccgca aacgccggat aagttcgtcg
      241 cgcggaacaa cctcacgctg cgcaaactcc gcgtcgcgat cgcgctcgtc tggcgagcct
      301 cccaaaccga cgacaatcca ttgccttacg ttgccgctca aatgcagcaa caggttcccg
      361 atactgtttg attcaggatt agcccgccac cagatttgct cgtcgcttag cagggcggcg
      421 cattgttcga tcttgggcag gtaatccgtg agcagcagcg aacgcgcttc ggagatgaat
      481 gcctggccaa cttcattcat accgagattg cctcactcct cttcaggccg tcgtttatgc
      541 ttggctttgc gtctcgccgg gctcgccttt tcgtcgggct tgacgtgctc gattgggtga
      601 cctggaggcg caagcggccg ccgaatcgaa ctgatgatcg acttctggtg gcgacgcttc
      661 ttcgagcggg aagacttcat cgcagatgca gtggaatcct gcgcgatgct atcgccgcgt
      721 cccgaaagtg tcaatacggg ttttgactga gtgaaggtga agggaagcga agcggagctt
      781 aggcttcgtt cggctgctgt tggcgcgcgc gaatgaggct ctcgattgct atcgaggttt
      841 cctctcgctg tctcttctgg aaatcgttca cccaaccgcc gacggtcgaa accatatcgg
      901 ttggcgtctt gcgtttgttc tgacgggccg aacggcggtt cggcttgttc aggacgcgct
      961 cttcacgctt aattactttt acaactctct tctctgacat tgcctgattt caacgtaact
     1021 gcttgcagca ggccgttgct ttcttggaat tgaatttaac gaaaactaat gacgaaagtt
     1081 ccgtgtggaa tttgcgtctt tttagggaaa gcgctactta gacgttcggc ggaggcagtt
     1141 ggttgcagaa cgttaatttg tctctcgatc cggaggatag cacggcaaac cgggaaaaag
     1201 ccacaggaaa ttaagctcga gccgacccat gcttggcggc catgtccacg cgccaaagct
     1261 tcttctgcgc ccgataagct aaaattccga gcacaatcac gccgccaatg gcgacgtacg
     1321 gcaaggcccc tttgagcggc cgggtcccaa acttaaccag taaagcattg atgataatga
     1381 ggccgatgcg catctcagtc ggcccgaaac gcgagaagct gactttgaat tcctcagtcg
     1441 tcgccagcat caggtacgtg tgaaacatga aggcgctgaa gacgcacagc accaggagca
     1501 tattgaagaa ggcccgctcc ggaatcagta aggtgtaacc gaggagaatc gaacagagga
     1561 agccgtagtc gaacaagtga tccatgtaga agccccactt gcacaaacct gtgtcgcgat
     1621 acttgccgag cttcccgtca aaatgatcgg tgaagtaatg aagcaccatc atcaggttca
     1681 ccatccagag ccagcgcaag ttgaactttg cgaggtaaca aaatccgaca atgcccagag
     1741 accaaagggg cgtcagcagc gtcaggtgat aggtctcgat ccagctcggg atgcgtggca
     1801 ggacgacgcg cgccaggcgg cgctcaaggg gcaccagcaa tcccgaattt gacttgccgg
     1861 cgccggcaaa cttctgcttg ccgtaaaccc gcgccgacca atccggcaaa tgagtttcgt
     1921 tgaccaccgt tgctgctgct tctcctggca tttgattcac ctctgcgaaa tggacctgtc
     1981 caaaccacag ccttcagcaa tcggcgagcc agcatcccga aaacccttgc tcgaatctgt
     2041 ggtttgacgt gtatgaggtg ccgtacggcg cgaaatattt atagcgaggg gggaactata
     2101 aacatttcgc catttcgcgg cgattgaaat ttgtggtagg tcgtggctcc acctgtgatg
     2161 ggtttccggc agtgctcaga taaaaaccac tgactgcgag gacggaatct cgaatcgctt
     2221 ccggcaacgc atattgcggc aggcaagcat gtcgtcaacg cggaccatat agtcgcgtga
     2281 ctttgcgaac tgagcgcgct ggtcttcgtt cattccacgc ggcggcgcgg gtttctttcg
     2341 gcgggtcagc cagcggacat cgtaatcgcc gcgctcgcgg cagtgggggc atacgaatga
     2401 cgcccgcttg gtttcctgtt tctcgttgaa aaagtcgctt tcgcgcatta tttgttcatt
     2461 cctaccacgg ccgcccgctt atgaagtacg cgctgaaccg catcaattag acgttccgga
     2521 tcaatcggcg caggttcgta agcatcggcg ccggcggcta aagcaatgct tggtagaccg
     2581 gttccccatt cggcgacggc cagtaccccg gtggcctttg tcccaaggac ttcgcgaact
     2641 tgcctgatta aatccggccc gttttcgcgc ttatccagtt cgacgataac caaatcaata
     2701 aacgaatcgg tcagtgcctc aatcgcgagc gcagaatctg ttaccgataa cactgcgaag
     2761 ccgttctgtt ccagtcggtg acggaccgat ccgtcgaggt gtgcgccgcc gacaaacaga
     2821 atgttttgtg tcatcgcgta tgggtacgca ggcctcaggc ctgccagcac gccagaggcg
     2881 tgcgtaccga cccgactcct accgttcgca aagatctctc aaatattgaa aactgtaaat
     2941 gcctgtttca tgaccgtcgc tccagcgaaa gttcaaagcg taccgcccga caatgctcaa
     3001 atccccgatt tcgatttcgt cagacacagc ctgcggccgg agcgtgcgtt gtcccgtcca
     3061 ttcgtcaacg cactgcgcgc aaggacaggc ccgccgaagc atcggggctt cgtactcgca
     3121 aacccgaccg tcagcccagg ttatccgcaa gcgcgagtta ctctcctgcg aaatctctgt
     3181 cggttcgatc gtttggcgtt tttgtgctgc gtcgatcata actaaagaac cattgccgcc
     3241 cgctatcccg attggtcggg atgtgactta cttcactggg tagcttcttc gactgcccgg
     3301 gtcaccgcct cggcagtgat gcgaaaatgc gaggccgacc acgccagctt gccgtcgcgc
     3361 acaaccagca cctgcggggt ttcgtgcggc agggcaaatc gagtctctat ctcgttcgaa
     3421 agagcgcggg ccttttgcac tgtgacgagg gcgacgcgct tttccagctt cgtcatctct
     3481 cgataggcgc gcgcgcttat gccacaagtg tcgctgtgct tgaagagtat gactggctgt
     3541 tcgccggact ggcctaaaag ctcatccagc cgctgggtat cgttcagctc catgaatccg
     3601 atttctttca taactgcaaa aacttccgct catcttaact gaccgactcg cggccgcaca
     3661 atccagcctc aagaacgcgt tgacaactgt cggctgccgt cctagcctat aggcaaatct
     3721 aagcgctaat gcgcgtcttt ggttcaggtt ccggagacac acttcccgcg gttagacaag
     3781 gagacagtca tgaaagccgc attccccctt cgaataacta ttctgatagt tctgtttgtt
     3841 ttcaccgtca tcagttccgg ctttgtgtac gcgcagaagc gacgcaacgc ccagccccgg
     3901 ggtcagagcc gcgcggccgt attggtcgac gaggcggaca agctggccga tgacaggaag
     3961 tggtcggaag cgaccgacgc atacaaactt gcgattcgcg ttgatccgaa ttacgcgccg
     4021 gcgcacggtg gcctgggcca cgcatacttg aacgccggta atccggaaca ggcgctgatt
     4081 gcctttaaag agcaggtccg cctggcgcca aatgactctg aagcgcaatt cgatctcggt
     4141 tattactaca atttcatggg ccgccacggc gaagcattcg cgccgctcgt gcgcgcttct
     4201 caactggatc caacgtttgc cgaagcattt tatgaaattg gttacgccta tctgcggggc
     4261 gaagatttca acaagtcgat aggatttttc cgaagcgcca tccgtctgaa gccggattac
     4321 gccgaagccc atctcggtct gggccaggtc tatgcgaagc agggcaaaac ggaattagcc
     4381 aacgagcaaa tccgaaaact caactcgctc gatccgaaac tggcgcgccg gttggagaaa
     4441 gaaatgcaaa ccgcgccggc aacaagtact tcaattactt caagccaacc ggcgcctact
     4501 gtaaccacag cgtcaccgcc cgttcaggca gcgccacctg cggccgagac aacgcaaagt
     4561 caaaatccac cttcgcccac cacggccacc acacggcctg aggggtcaac cgccccaacg
     4621 gtgacggagc caacgtcgcg ccagttgcag cagataccga cagcaccggc gcaggaatca
     4681 acgacgtctc catcagttac tcaaaccgga caaatcaact ctctaccgat tggtcccaaa
     4741 cgttgggcat tagttatcgg cgtcgacaaa tatcaggatc cgcagatcag cccgttgaag
     4801 ggatcggata acgacgcgcg tctgatcgca gacgcgttgg tccggtacgc cggatttccg
     4861 aaagaccagg tcatcctgct ttccaccgac cagccgctgg aaagacaacc gacgcgcgtg
     4921 aatattctgc ggcgactttc gaatctttcc acggcggttc cgaaagatgg cctgctggtc
     4981 atctcgtttg cgggtcatgg aatggagcgc ggcggtcacg cttttctgct gccgtccgac
     5041 gcgcaaatca gcgatcagat ttcgtttctg gaagagaccg ccatcagcac gaaccgcgtt
     5101 aaggaccgca tcaaggaaac gggcgtctcg caggtcgtat tgctgcttga cgcttgtcgc
     5161 aacgatcccg gcgggcgtgc cgatgcgcca aatccgttga ccaacgctta cacgaacgcg
     5221 ttcaactttg atgttcgcaa tcgcgaagtg caggccttcg ccacggtcta tgcgaccggc
     5281 atcggccagc gagcctatga atacactgaa aagaagcagg gctattttag ttgggcgctg
     5341 gtcgaaggat taaaaggagc agccgcgaat gagaaaggcg aagtcacgct ctcgcaactc
     5401 gtcaaattcg tgcaggacac ggtgccgaaa cggctcgcga tcgacctggg ttcaacgaag
     5461 caacaaaagc cttttgccgt gattgaaggc tatcgcgccg atgaattggt cgttgcggta
     5521 acgaactctg cttcgatggc gtcaagcgcc acaaccccaa atgtccagac ggtcgatccg
     5581 gcggcacttg aactgtcttt ctgggacacg attaagaaca gcaacaaccc ggacgacttc
     5641 aaagcctatc tcgacaagta tccggacggt caattcgcgg cgctcgcgcg atcgcgatcg
     5701 caggccacca gaaccatggg taacaccggc ggcggtgact caatggaaat ggtctactgg
     5761 aacgcgatta aagatagccg caatccttcg gacttccgcg ggtacgtcac caaattccca
     5821 ggaggacttt ttgtggaact cgcaaacaac cggatcgcat cgctcgaggc ggaaggccgt
     5881 gacgcggccc gcgccaaaga agttgccgcc gaagaagagc gccgtcgcaa cacgcgcatc
     5941 ttcgaagtga aagacgccgg cgggactgaa ggctcgctga cagtcacgcc cgggaagtta
     6001 gccttcgagc cgaagaaaac aaacccgaag aaaaacatgg cgatcgaatg cacgcagatc
     6061 aaacgcatcg aggccggtaa atctgtgtac cagccgccgc atgtaaacat ctatctggca
     6121 gcgctgcccg gagcgaaaga acgcaccgtc gtgtactaca cggcttcggg cggcacggga
     6181 ttattcgtca aaacacccgt cgttgacatc acctccaacg tcatcgacgg agtagtcaat
     6241 gcctgcaaga tggtgcggat gaatcagtga agattgatta cctcacgtcg caatcgtgac
     6301 gacaaaggat caagccaact cggcggcgcc cgggtctagt gacactggcg ccgccttcga
     6361 tcatccaact tcagacgcag tcgcgccgac attaaccgtg ggcgaaggac tgggccgcgc
     6421 acctctggct gagacgtcat tgtttcccag cgaaagcctg ctcgaagcca caatcgataa
     6481 tcgctatttc gtcgaaaaag aactcggacg cggcggggtc ggtgttgtat atctcgcccg
     6541 cgatcgaaaa ctgcacgaca aggccgtcgt cattaaagtc ctgctcgaga agtctctgca
     6601 aaactcctgg gtggtacaga aatttcagca ggaaaaggaa gctctggcgc gcgtcgatca
     6661 ccccggcgtc gtcgggattc tggataacgg c
//
LOCUS       DATDBY010000212         8068 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2097192, whole genome shotgun sequence.
ACCESSION   DATDBY010000212 DATDBY010000000
VERSION     DATDBY010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8068
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2097192"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..6793
                     /locus_tag="VIT19_03980"
     CDS             <1..6793
                     /locus_tag="VIT19_03980"
                     /inference="COORDINATES: protein motif:HMM:NF027510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cadherin-like domain-containing protein"
                     /protein_id="HEY5838171.1"
                     /translation="NGNTNQTIAGGSSTTFNGLTIANTGDPNIPNNVVSLDGSAGANN
                     TAAATLTVINGVFDQGSDSASSNLSLTGAGDVATITLNGTWQNFGTGDITLNGDVSNN
                     GSLEIDANARPCGQSDDILIRSSASGTQRTWKGTGTFSMTDVDVQDQKVPGGSTLPLA
                     ILVASGTDHPATNIGWRFNDSCTGPYTWLGGGNRRWIKPACWSPTRESAADLVTEDVL
                     IFDGSVDPAPFVDEVPNQTNAAIHLTNGVHVTFEEPELLEATLTLNGASGEDLDVPAG
                     TVLTLAGSLPFVIELTAPGHQCEVAGQIIMKDDRHQFIGANAGQITITGRVTIDSTYS
                     AIEHPFGQGTNGSVVFESGSTGMFSRGLDPFGGIGRAVVTFNAGSTAHFLSNGAFFGQ
                     TGATYGNLILDGTQGYTFAGSTQTTILNNLEIQPGSTFLLSNSPGADLNLYGNFVDRT
                     AIANGFSTNGRVVKFLGTTQTVSKAEGGIVSLDDVFINQSPGGKVQLLSPTDIAGQLN
                     LSTADALLELNGQVVELLGTVTGPGNLKGDPNAIIAVNGAGALGTVNFASGGRTLLGL
                     LLNREVNGSMTLGTDLAVAGTLRLDDGKLITANTLSLSSISSVLRTNGYVLGNVQKSF
                     GESGIGTFTFPVGTANAYSPLDANVTANTNGTLTARAVEGTQPNIPGGTNALQRYWTL
                     SGSGITADLTFHYSTSPTNDVVGNEANYKIFKYDGAFTQFTPDATGSNSASDHFATLN
                     NVSSFSDWTLAEAPTIIVGNDDSYSTNEDTSLNVAAPGVLTNDTGDTLTASLDTGPSH
                     ALSFQLNVDGSFDYTPAADYNGQDSFIYTIHDAQAGTANAIVTITIDPVNDAPTFQIT
                     SDPPAVNEDVDAQTFDNFATNFQPGPATATAEAGQTLHGYAITANGSTGGLTFSSGPA
                     IDNAGTLTYTPAANANGTATFNVVATDSGSGLPPDVNQSVPVSFMITVTPQNDSPTLA
                     NNAGLLVANGGTETINQIRLKVDDVDNTAAELVYTIGTAPVNGTLKNNGVDLLAGGTF
                     TQADINDNQIAYQHNGSAALTDSFTFTVADGAGGSIGSTTFNITIGCSDNITVTSIAD
                     SGNGTLREALGGICAGGTITFDTAGTFSTPQTIILSSELTIGLNPGLENVTIDGPDPA
                     TQRVTIAGGGGSRLFRTQSGKTATIRDLTLTGGSVAGDFGGAIYNDHATLTLSGLTVS
                     GNTADFGGAIYNNGGPPNGDGAATLTIVNSTISGNTASVGGGAIYTSSSGANLNGATV
                     NITNSTLSGNNSAGNGGGVFSDGISGITPVSITNSTITDNRADTGNGGSSTGGGLFIV
                     GGTEVTLRNSIVDLNFAGSGTTANDIRGAVVAGGVSTHNLIGSCSLPCGLTNGVDNNS
                     LNVSAASLNIGALLPNGAINWTHALLPGSVAVEAGNDVTTLNGDITDVAPLINLTNAT
                     AFPAGVGFPIRIDDEQMIVTDKAGNVLTVIRGANGTTAASHSVGAGVNPAFDGRGSGF
                     IRQADSADADAIATVDIGAFELQPSIEDIGNQTTNEDTQFNLTFNIGDGALISGVTAT
                     SDNQTLAPDGNITVDGTGSTRTIHITPTATLSGGPVTITVTVTATNGGTAQDTFELTI
                     TPVNDGPVNTVPGPQVTSLNIPLVFSSANGNQVSVADLDAGTNAIQVTLNATNGTLTL
                     SGTTGLSFSFSDSNGIGTGDGTADETMTFRGPITNINDALNGTSFEPTPGFSGDVTVQ
                     IISNDLGFTGAGDVLTDVDSISATVAPTVSVVSVQDAQAAEPASGTADLLFTVTLISP
                     APAGGASVQYASADQAPAPDHAVGGATCGSPGVDYEAKAPTTLSFAAGEQFKTVSVRV
                     CSDALASESTETFLLNLSNPMDATISDGAATGSITVTDTSGTLLISELRTSGPGGADD
                     DFVELYNNSNSPVDISGYGLFKMGATCVDQPVLIATIPNTPTPTVIPARGHYLLVGSA
                     YSLTNYGGTGSATGNLTLTAGIETDRNIALFSTANLAAISTVNRLDAVGFGVNTGGAC
                     NLLREASTLPPIAGNATIEHSYFRKMCDWLQGQGCTVPGIPKDTNNNANDFWLADTAG
                     SAITGRLGAPGPENLASPIRRDNAGINMVVLDGTVGASAAPNRDRNSGDPAGLFGSMK
                     LRYRVTNNTGGPVTRLRYRIVDMSTAIQPVGPTADLRALTSSVESVGQVNDTVTCTAD
                     GAGAPSCTVTVTATTLETPPNQAIGGGYNSTLSSGTITTGTPLPNGQSILIHFKLGVQ
                     KTGTFRFYIIVEALP"
     gene            complement(6935..>8068)
                     /locus_tag="VIT19_03985"
     CDS             complement(6935..>8068)
                     /locus_tag="VIT19_03985"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5838172.1"
                     /translation="LSKSFKKARVLEDVSFDVSEGESLVLLGASGSGKTTILRIIAGL
                     EQPDKGQVILHGKDVTDLPARERGVGVIFQAYALFPRMTVEKNIAYGLKIRHQPRKER
                     RETVDRLIKLVQLEEHRKKYPWQLSGGQQQRVAIARTLAYKPQVLLFDEPFGALDAQT
                     RVHLRREIRSLLKQVKVPSIFITHDQEEALELGDRIAVLNNGHLEQIGTPDEVYNNPA
                     TEFVATFLGAANLLLGVATSGHVEIGTARLPAEKETRRFREGQSVKLVFRPEDVCLSP
                     DAQLPEGCRRLANGVVEQVNFVGAYERLNVRLDLAHRPQSGDLAPLYEVTINTPERMV
                     GVPIMATRPKPDASATRFKVGDRVAVGLTSFSLLPNYTLARQR"
BASE COUNT         1754 a         2366 c         2331 g         1617 t
ORIGIN      
        1 caacggcaac acaaatcaga cgattgccgg tggcagttcg accacgttca atgggctgac
       61 aatcgcgaat accggcgatc cgaacattcc aaacaacgtc gtgtcgctgg atggatccgc
      121 cggagcgaac aacaccgccg cagcaacgtt gactgtcatc aacggtgtct ttgatcaggg
      181 ttcggacagt gcttcatcga acctttcgct gaccggagct ggcgatgtcg caacgatcac
      241 gctaaacgga acctggcaaa actttggcac cggcgatatc actcttaacg gcgacgtttc
      301 caacaacggc tcgctcgaaa tcgatgcgaa cgccaggcct tgcggtcaaa gcgatgacat
      361 tctgattcgg tcttcagcgt ccggcacgca gcgaacgtgg aagggcacgg gcaccttttc
      421 aatgaccgat gtagatgtgc aggaccagaa agttcccggc gggtcgactc tgccgctggc
      481 gattctggtt gccagcggca ccgatcatcc ggcgaccaac atcgggtgga ggtttaacga
      541 cagctgcaca ggcccataca cgtggctagg cggcggtaac cgacgatgga ttaagccggc
      601 ctgttggtcc cccacacggg agtctgccgc cgacctggtc acagaggatg ttctgatttt
      661 tgatggcagt gttgaccccg cccctttcgt tgatgaagtg cccaaccaga caaacgcggc
      721 catccacctt acgaacggcg tacacgtaac ctttgaagag cccgaattgc ttgaagcgac
      781 gctgacgttg aacggcgcct cgggcgagga ccttgatgtg cccgcaggca cggtcttgac
      841 ccttgccggt tcgctgccgt tcgttattga gcttacggct cccggacacc agtgcgaggt
      901 ggcgggacag ataataatga aggatgaccg gcatcaattc attggcgcca acgccggtca
      961 gatcaccatc actggccggg tgacgataga cagcacctat tctgccatcg agcatccatt
     1021 tggccagggc acgaatggat cagttgtatt tgaatcagga tcgactggga tgttcagccg
     1081 cggtctcgat ccgttcggcg gcatcggtag agcggtcgtc actttcaatg caggcagcac
     1141 ggctcatttt ctctcgaacg gggcattttt tggccaaacg ggggcgacct acggaaatct
     1201 gattttggat ggcacccagg gttatacctt tgcgggctcg acccaaacaa ccatactcaa
     1261 caatttggag attcagcccg ggagcacctt ccttctctcc aactcacccg gggccgatct
     1321 gaatctgtac ggcaacttcg tagataggac cgcaattgcc aacggtttca gcacgaatgg
     1381 acgcgtcgtg aagttcctgg ggacgacgca aacggtctcc aaagctgagg ggggtattgt
     1441 tagtttggac gacgttttta tcaatcagag ccccggcggc aaagtccaat tgttgagtcc
     1501 gaccgatatc gccggccagt tgaatctcag cactgcggac gccttgctcg agctgaacgg
     1561 ccaggtggtt gaactcctcg gcacggttac cggccccggc aatctgaagg gcgatccgaa
     1621 cgcaatcatc gccgtcaatg gcgccggcgc tctcggcaca gtcaatttcg catccggcgg
     1681 acgtaccctg ttgggccttc tgcttaatcg cgaggtcaat ggatcaatga cgttggggac
     1741 cgacctcgcc gtagccggga cactgaggct ggatgacggc aaactgatca ctgcgaacac
     1801 gctctcgctg agttcaatct cgtcggtgtt acgaactaac ggctacgtcc ttgggaatgt
     1861 gcaaaagagt ttcggggaga gtggcatagg cacttttact ttcccggtgg gcactgccaa
     1921 tgcctactca cctcttgacg caaacgtaac ggctaacacc aatggcacgc tcaccgcccg
     1981 agcagttgaa ggaacgcagc cgaacattcc tggcggcacg aacgccctgc aacgttactg
     2041 gaccttgagt ggttccggca tcaccgcaga cctgaccttc cattacagta cgtcgccgac
     2101 taacgacgtc gtcggcaatg aagcgaatta caaaatattc aagtacgacg gcgcgttcac
     2161 acagttcacg ccggatgcga ctggatcgaa tagcgcgagc gatcatttcg cgacgctcaa
     2221 caacgtctct tcattcagcg attggacttt ggcggaagcc ccgacaatca tcgtcggcaa
     2281 cgacgacagc tacagcacga acgaagacac atcactaaac gttgccgccc cgggcgtgct
     2341 cacgaacgac actggcgaca ctctgacggc ctcactcgac accggccctt cgcatgcctt
     2401 gtccttccaa ttgaacgtgg acggctcgtt cgattacaca ccggcagctg actacaacgg
     2461 gcaggattca tttatctaca cgatccatga tgcacaagca ggtactgcta acgcgatagt
     2521 taccatcacg attgatccgg tcaatgatgc gccgacgttt caaattacca gcgatccacc
     2581 ggccgtcaac gaagatgtcg acgcccaaac cttcgataac tttgccacca acttccaacc
     2641 gggaccggcg acggcgaccg ccgaggcggg acagacttta cacggctacg cgatcacggc
     2701 aaacggctcg accggcggct tgaccttctc gagcgggcct gcgatcgaca acgctgggac
     2761 gctgacttac acgccagcag ccaatgccaa cggcacggca actttcaacg tcgtcgccac
     2821 cgacagtggc agtggcttgc cgcccgacgt caaccagagc gtgccggtgt cgttcatgat
     2881 taccgtcact ccccagaacg acagtccgac cctggcgaac aatgcaggcc tgttggtggc
     2941 caacggcgga acggaaacga tcaatcaaat taggctgaag gttgacgacg tcgataacac
     3001 tgccgccgag ctggtctaca cgatcggcac ggccccggtt aacggcacgc taaagaacaa
     3061 cggtgtcgat ctattggccg gcggcacttt tacccaagcc gacatcaacg ataaccaaat
     3121 cgcttatcag cacaacggta gtgcggccct taccgacagc ttcaccttca ctgtcgctga
     3181 tggtgccggc ggctcgattg gatcgaccac cttcaatatc acgatcggat gtagcgataa
     3241 cattactgtc accagcattg ccgatagtgg taatggcacc ctgcgtgaag cgctcggggg
     3301 aatctgtgcc ggcgggacaa tcacgtttga tactgcgggt accttctcga cgccgcagac
     3361 gatcattctc agcagtgaat taacgattgg ccttaaccct ggccttgaga atgtgacgat
     3421 cgacggtccc gatcctgcga cgcaacgagt gacgattgcc ggtggcgggg gcagtcgcct
     3481 gttcaggact caatcaggca agacggcaac gattcgtgac ctaacgctta ccggtggctc
     3541 ggtggcgggc gactttggcg gcgcgatcta caacgatcac gccacgctca cactcagcgg
     3601 attaaccgtg agtggcaaca cggcggactt cggcggggct atctataata atggaggtcc
     3661 gccgaacggc gacggcgctg cgacgttgac gattgtcaac agcacaatca gcggcaacac
     3721 agccagcgtt ggtggcggcg caatctacac ctcaagtagc ggcgccaacc taaacggtgc
     3781 gacggtaaat attacgaaca gcacccttag cggtaacaat tccgcaggga atggcggggg
     3841 tgttttcagt gatggtatta gcggcatcac gccggtaagt atcaccaaca gcacgattac
     3901 ggacaaccgc gccgataccg gcaatggcgg cagttccaca ggcggaggcc tgtttatcgt
     3961 cggcggcact gaagtcaccc tgcgcaattc gattgtcgat ttgaattttg ctggttcagg
     4021 caccactgcc aacgatattc ggggagcagt agttgccggc ggcgtcagca cccacaatct
     4081 gataggaagt tgcagtctgc cttgtggact gactaacggc gtggacaaca atagtctgaa
     4141 cgtctcggcg gccagtttga atattggggc gcttttgcca aacggcgcga ttaattggac
     4201 gcacgcctta ctgccaggca gtgttgcggt cgaagcgggg aacgatgtca ccacgctcaa
     4261 tggcgatatc actgatgtgg cgcctttgat caatctgact aatgccacag cttttcctgc
     4321 cggagtcggc tttcccattc gcattgatga cgaacagatg atcgtcaccg acaaagctgg
     4381 aaatgttttg actgtgatcc gaggagcgaa cggcaccacg gccgcttcgc acagcgttgg
     4441 cgcaggggta aatcccgcgt tcgacgggcg cggcagtgga ttcattcgtc aggctgattc
     4501 ggcggatgcc gacgcgattg cgactgtcga tatcggcgcg ttcgagctcc aaccgtcgat
     4561 cgaggacatc ggtaaccaga cgacgaatga agacacgcag ttcaatctta ccttcaacat
     4621 tggcgacgga gcgctgatta gcggcgtgac cgcgacatca gacaatcaga cgctggcacc
     4681 ggacggcaac atcaccgttg acggcactgg atcgacgcgc accattcaca tcacgccgac
     4741 ggccaccttg agcggcggcc cggtcaccat cactgtgacg gtgaccgcca ccaatggcgg
     4801 gacagcacaa gacactttcg aacttacgat cactcccgta aacgacggtc cggtgaacac
     4861 ggtgcccggt ccgcaggtca cgtccttgaa cattccgctc gttttctcga gcgccaatgg
     4921 taaccaggtt tcagtggctg atctcgacgc ggggactaat gccatccagg tgacgctgaa
     4981 tgcgaccaat ggcacgttga cgttaagcgg caccaccggt ctaagtttta gctttagcga
     5041 tagcaacggc attgggacag gcgacggcac ggccgatgag acgatgactt tccgcggccc
     5101 gattacgaac attaacgacg cattgaacgg cacgagcttc gaaccgacac ccggtttcag
     5161 cggcgacgta acagtccaaa tcatcagcaa cgacctgggt ttcaccggcg cgggtgacgt
     5221 attgactgat gttgatagca tcagcgctac ggttgcgccg acagtctcag tagtatcagt
     5281 tcaggatgcg caagcggccg aacctgcctc aggaactgct gacctgctgt tcacagtgac
     5341 attgatttcg ccggcgccgg ctggtggcgc gtcggtacag tacgcctcgg ctgatcaagc
     5401 accggcccct gatcatgcgg tcggaggagc gacctgcggc agtccgggtg ttgattacga
     5461 ggcgaaggct ccgacaactt tgagctttgc ggcgggcgag caattcaaga cggtttcggt
     5521 ccgggtttgc tctgatgcgc ttgcttcgga gtcaaccgag acgttccttc tcaacctttc
     5581 gaacccgatg gacgccacaa tctcagacgg cgcagccact gggtcgatca cagtgaccga
     5641 cacgtcagga acattgctta tctctgagct gcgcacttcc ggcccgggcg gcgcagacga
     5701 cgactttgtt gagctgtaca acaactctaa cagtcccgtg gacatcagcg gctatggatt
     5761 gttcaagatg ggtgcgacct gcgttgacca gccagtgctg atcgcaacga taccgaacac
     5821 gccgaccccg accgtgatcc ccgcgcgcgg ccattacctg ctggtgggct cggcgtattc
     5881 acttacgaac tatggcggaa cgggttcggc caccggcaat ctcacgctga cggcgggcat
     5941 cgaaacggac cggaacatcg cgctcttctc gacggcgaac ctggctgcga tctcaaccgt
     6001 gaatcggctc gatgcggtgg gcttcggcgt aaacacgggt ggcgcgtgca acctgttgcg
     6061 cgaagccagt actctgccgc cgattgccgg gaatgcgacg atcgagcaca gctacttccg
     6121 caagatgtgc gactggctcc agggtcaggg ttgtacggtg cccgggattc cgaaggacac
     6181 caacaacaac gcaaatgact tctggctggc ggacacggcc ggatcagcca ttaccggccg
     6241 gctgggcgct ccgggtccgg agaaccttgc gtcaccgatc agacgtgaca acgcgggcat
     6301 taacatggtg gtcctggatg gcacggtcgg cgcgtcggca gctcccaacc gcgaccgcaa
     6361 tagcggcgac ccggccggcc tgtttggcag catgaagctg cggtatcgcg tgaccaacaa
     6421 caccggaggt ccggtgacgc gtttgcgtta tcgcattgtg gacatgagta cggcgatcca
     6481 gccagttggt cccactgccg atctgcgggc gctgacttcc agcgttgaga gtgttggtca
     6541 ggttaacgac acggtgacgt gtacggcgga cggggccggc gcgccttcat gcacggtgac
     6601 cgtgaccgcg acaacgttgg agacgccacc gaatcaggct atcggcggtg gctataactc
     6661 gaccctgtcg tcgggcacaa tcacaacggg aacgccgctg ccgaatggcc agtcgatcct
     6721 gattcacttc aagctcgggg tccaaaagac gggcaccttc cgcttctaca tcatcgtaga
     6781 agcgctgccg tagggcattt ttggagtgcg ctgacttgtc agcgcttttc ccgttcgcat
     6841 tgggtcgtag taagaagaaa agcggcgacg agtcgccgca ctccaaaaaa taacaaggcc
     6901 gcgtgaagat tcgctctcca cgcgcttttt tttcttatct ctgccgcgcc agggtgtaat
     6961 tcggcaggag gctgaaggaa gtaaggccga cggcgacgcg gtcgccaacc ttgaatcgcg
     7021 tcgcgctggc gtcaggtttc gggcgagttg ccatgatagg cacgccaacc atgcgctcgg
     7081 gtgtgttgat ggtgacttcg tagagcggtg cgagatcccc gctctgcggc cggtgcgcga
     7141 gatcgaggcg cacattcaat ctctcataag ctccgacaaa gttaacttgt tcgaccacgc
     7201 cgttcgcgag acgccggcag ccttcaggta gttgcgcatc gggactcagg caaacgtctt
     7261 caggacgaaa gacgagtttc accgactggc cttcacggaa gcggcgcgtc tctttctcgg
     7321 cgggcagtcg cgcggtgcca atctcgacgt ggccgctcgt ggcgacgccc agcaaaaggt
     7381 tcgccgcacc gaggaacgtc gcgacgaact cagtcgcggg gttgttgtaa acctcgtcgg
     7441 gcgtgccgat ttgttcgagg tgtccgttgt tcagcacggc gatgcggtcg cccaactcga
     7501 gcgcctcttc ctgatcgtgc gtgatgaaaa ttgacggcac ctttacctgt ttgagcagcg
     7561 agcgaatttc gcgacgcaga tgcacgcgtg tttgcgcgtc gagcgcgcca aacggttcgt
     7621 cgaacaaaag cacctgcggc ttgtaggcga gcgtgcgcgc gattgcgacg cgctgctgct
     7681 gaccaccgga gagttgccat ggatatttct tccggtgctc ttccaactgc accagcttaa
     7741 tcagccgatc gaccgtctct cgtctctctt tgcgcggctg gtggcgaatc ttcaatccgt
     7801 acgcgatgtt tttctcgacc gtcatgcgcg gaaacagcgc gtacgcctgg aaaatgacgc
     7861 cgacgccgcg ttcgcgtgcg ggcaaatcgg tgacatcctt gccgtgcaga atcacctggc
     7921 ctttgtccgg ctgttcgagg ccggcgatga tgcgcaaaat agtcgtcttg ccgctgcccg
     7981 acgcgccgag caaaaccagc gactcgcctt cggaaacgtc gaagctgacg tcctcaagca
     8041 cacgggcctt tttaaagctc ttgctgag
//
LOCUS       DATDBY010000213         2743 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_211171, whole genome shotgun sequence.
ACCESSION   DATDBY010000213 DATDBY010000000
VERSION     DATDBY010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211171"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..648
                     /locus_tag="VIT19_03990"
     CDS             <1..648
                     /locus_tag="VIT19_03990"
                     /inference="COORDINATES: protein motif:HMM:NF044283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838173.1"
                     /translation="FRILGEGQLALTKFLILTDSDIDLPDFPRVLEHVLARVKWESDL
                     FIFANTSMDTLDYTSGTVNKGSKAVLMGLGDAVRDLPREFRNELPNGISRAEMFCAGC
                     LVVQGQPYMEDKEQGARLASDRTFADWPLVVLHDDASVAKSSTDFLWSTWTRFEPAGD
                     IYAAETKVVRHHLSYQAPIVIDARKKPSLPDELVVRDDIAKMVDSRWREYFPKVT"
     gene            733..1686
                     /locus_tag="VIT19_03995"
     CDS             733..1686
                     /locus_tag="VIT19_03995"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY5838174.1"
                     /translation="MINLAYVIAVAICIGLLIFLFQALRRLTGTEETSRHQLWRRRLR
                     VAVALVLLAGFMCGVWVFLIEPNRLVVNQQAIQINNWPNDLKGIRLGVIGDIHAGAPF
                     IDDLKLRLLVERTNQQQPDLVVLLGDFMSQDTWHGHRVAPEIIANHLKYLQAPLGVYA
                     VLGNHDWWDNGDEVRRALEQAGIRVLENDVSEVKRGGTSFWLAGLADIWTRPQQVPET
                     LAKIPSGSLIIALTHNPDVFQRLPRTVPLLLAAHTHGGQVNFPLIGTPVVPSRFGQKY
                     SAGHVFENDHHLFVTTGIGTSILPVRFRVPPEIVVLTIESK"
     gene            1979..>2743
                     /locus_tag="VIT19_04000"
     CDS             1979..>2743
                     /locus_tag="VIT19_04000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838175.1"
                     /translation="MTKNLIRRGVVAGLVGVALLVLSVPVAKLATSNAAVFEACINSG
                     NGMMRLVDSSTACHNNETRIQWNEEGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPT
                     GPTGPTGPTGPTGPTGPPGPSSGGAPYVWVCMPAHRANTIGSQRLDLYVFNGSTSAAN
                     IAVNILDSTGNNLAGVTIPGTASDTYPGEAGATTVPLAAGHTRDVFWTMPTTGGPGFD
                     GVTNVSFSVRVTSDQPIVVGANFMIGGFLESKCGLLP"
BASE COUNT          593 a          758 c          772 g          620 t
ORIGIN      
        1 ttccggattc tcggtgaagg ccagttggcg ctgacgaagt ttctgatcct cactgactcg
       61 gacattgact tgcccgactt tccgcgcgtg ctggaacacg tgctggcgcg cgtgaagtgg
      121 gagagcgacc tcttcatatt cgcgaacact tcgatggaca cgctggatta caccagcggc
      181 accgtcaaca agggtagtaa agcagttctg atgggattag gtgacgccgt ccgcgacttg
      241 ccgcgcgagt tccgcaacga actgcccaac ggaatttcgc gcgcggaaat gttctgtgca
      301 ggttgcctgg tcgtgcaagg ccaaccgtac atggaagaca aggaacaggg ggcccgtctc
      361 gcaagtgatc ggacttttgc ggattggcct ctggtcgtgc tgcacgacga tgccagcgtc
      421 gcaaaatcgt cgacggattt tctttggtca acctggactc gctttgaacc cgctggagat
      481 atctacgccg ctgagacgaa agtcgtgcgg catcatcttt cgtatcaagc acctatagtg
      541 attgacgcgc gcaagaaacc ctcgcttcca gatgaattgg tagtgcgcga tgacattgcg
      601 aagatggtag acagtcgctg gcgcgaatac tttccgaaag taacgtagcg caagttgtta
      661 acttgcgcgg acgcaaatta gcaatttgcg gtacgtcaaa atcgaagtcg tgggttccat
      721 gccaatcctc agatgataaa cctggcctac gtaatcgcag tcgcaatttg tattggcctt
      781 cttatctttc tgtttcaggc actcagacgc ttaaccggca ctgaggagac aagccgtcat
      841 caactgtggc gaaggcgact tcgcgtcgct gttgcgctcg tcctgctcgc aggttttatg
      901 tgcggagtct gggtgttcct cattgaaccc aatcgtctgg tcgtcaatca acaggcaatt
      961 caaatcaaca actggccgaa tgacctcaag ggaattcgcc tcggcgtcat tggagatatt
     1021 catgccggcg caccgtttat cgatgacctg aagttgcgtt tgctcgttga acgcaccaat
     1081 caacaacagc ccgatctagt tgtgctgctt ggcgatttca tgtcgcagga tacctggcac
     1141 ggtcatcgag tcgcgccaga gattatcgcc aatcacttga agtatcttca ggcgccgctc
     1201 ggcgtttacg cagtgctcgg caatcacgac tggtgggaca atggcgacga agtgcgccgg
     1261 gcgcttgagc aggcaggcat tcgggttctc gaaaacgatg tcagcgaggt caagcgaggc
     1321 ggaacaagtt tctggctggc aggcctggcc gatatttgga cgcgtccgca acaagtgcct
     1381 gagacgcttg caaagatccc gtcgggctcc ctgataatcg cgctgacgca taatcccgat
     1441 gtgtttcagc gcctccccag gactgtcccg ctattgctcg ccgctcacac gcatggcggg
     1501 caggtgaatt tccccttgat cggcacaccg gtcgtaccgt cccgcttcgg gcaaaaatat
     1561 tccgccggtc atgttttcga aaatgatcat cacctgttcg tgaccaccgg aatcggcacg
     1621 agcattctgc cggttcgttt tcgcgtgccg ccggagattg ttgtgctgac aattgagagc
     1681 aagtagtttt agaagcggta gtgggcaatt ctgtggagat ggtttagcgt cccgaaggga
     1741 tgcgggatat tggccagggg ttagcgacgc agtcgcgcga ccctggaatc caaactcagt
     1801 gggctgcgct tccgctggcc cacggccaat atcccccatc ctttcgacat gacacgcctt
     1861 gtctaaaaac ttattgacag cctaagagcg ccgtcataga ttcgctactc cccaaccgat
     1921 gtttccacgt ttaatgcaga gaggcggctg gaaaatgccc cctggaagga gactacaaat
     1981 gactaagaat ctcatacgcc gtggtgttgt tgccggtttg gtcggcgttg ctttgctggt
     2041 gctgtcggtg cccgtcgcaa agttggcgac gagcaatgcc gcggtgtttg aagcttgcat
     2101 caattcaggt aacggaatga tgcggctggt agattcaagc acggcctgtc acaacaatga
     2161 aacccgcatt caatggaatg aagaaggccc gacgggccca accggcccta cgggtccaac
     2221 cggtccgacc ggtccaactg gcccaaccgg tccaactggc ccaaccggcc caacaggtcc
     2281 caccggccct acgggtccca ccggtccgac cggtccaacc ggcccaacgg gcccaccagg
     2341 accttcgtca ggtggagcgc cgtacgtctg ggtctgcatg ccggctcacc gtgccaatac
     2401 aatcggctcg caacgtctgg acctgtatgt ttttaacggc agtacctctg cagctaatat
     2461 cgcggtcaac atcctcgata gcactggaaa caatctagcg ggtgtgacga ttcccgggac
     2521 agcctcagat acttaccccg gtgaagccgg cgcgacaacc gtacctcttg cagccgggca
     2581 tacccgtgat gtgttttgga ctatgccgac aacgggcggg cccggatttg atggcgtgac
     2641 gaatgtatcc ttctcggtaa gagttacttc ggatcagccg atcgttgtag gagcaaactt
     2701 tatgatcggc ggatttttgg aaagcaagtg cggtctgttg ccg
//
LOCUS       DATDBY010000214         2864 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_636657, whole genome shotgun sequence.
ACCESSION   DATDBY010000214 DATDBY010000000
VERSION     DATDBY010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2864
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_636657"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1155
                     /locus_tag="VIT19_04005"
     CDS             <1..1155
                     /locus_tag="VIT19_04005"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEY5838176.1"
                     /translation="AVTLLLSRYVLPRLFRSAAKIPELVLIMALAWCFLVCAAASYSG
                     LSKEMGALIAGVALSTFPYSLDVIAKVISIRDFFVTLFFVALGMKIPMPTPVILGLAA
                     LTSAFLIASRFVSIFPVLYLMRYGHRVSLIPAINLSQISEFSLVIASLGLALGHINSQ
                     AVSLIIFVFVITSTTSTYMITYNHQLAAGLSRVLSVLRIRDLGMNIAEPTAASPKRVV
                     FLGFFREASAIVHEFELSGSENQPHPLLDEMLVIDFNPVVYSELKRRGIECVYGDVAH
                     MDTLHHARIHDAEVVISTIPDHILKGTDNQRLLKKIRQLSPDAHIIVTADSPRAAIDL
                     YDRGADFVFIPRIHSSSEVARVIENGLSDGFKKLRDEQLAHLRTRDEILA"
     gene            complement(1643..>2864)
                     /locus_tag="VIT19_04010"
     CDS             complement(1643..>2864)
                     /locus_tag="VIT19_04010"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEY5838177.1"
                     /translation="RADWGRIVATLIRLCGDFDVAEDAAQEAFAAAVKQWPNEGVPAS
                     PAAWIIQTAKHKAVDRLRRQTRFQEKAESYAQEQPTTTEQPELTDHEIPDDRLRLIFT
                     CCHPALAPESQVALTLRTLCGLETDEIARAFLVPATTMAQRLVRAKRKIRDAGIPYKI
                     PDASEIRQRLDAVLTVIYLVFNEGYASTHGERLLRTDLCGEAIRLARIVRVLLAPYPP
                     AEVPGLLALMLLHDSRRDARVDEAGDLVVLEEQNRALWNQSQIAEALPLVSQAIASPA
                     AGPYAVQAAIAAEHCKAQRSEQTDWRQIVELYDRLASLQPSPIVSLNRAVAVAMADGP
                     ERGLRLIDDLMASGELDDYHLLHAARADLLRRSGSNKEAAASYTRALELTSNDAERRF
                     LEKRRRNMQAASSD"
BASE COUNT          579 a          818 c          796 g          671 t
ORIGIN      
        1 gcggttacgc tactgctcag tcgttacgtt cttcctcgtc tgtttcgctc ggcagccaaa
       61 atacctgaac tcgtgctcat catggcgctc gcctggtgtt ttttggtttg cgcggctgcg
      121 agttattccg gcttgtcgaa agaaatgggt gcattgatag cgggagtcgc actttcgacc
      181 ttcccttaca gtcttgatgt cattgccaaa gtcatcagca tcagggattt ctttgtgacg
      241 ctcttcttcg tggccctggg aatgaaaatt ccgatgccca caccggttat cctgggctta
      301 gccgcgctga cttcagcttt cctgatcgcc agtcgcttcg tgtcgatctt tcctgtgctc
      361 tacctgatgc gttatggcca ccgcgtaagt ctgattccag cgatcaacct atcgcaaatc
      421 agtgagttct cgctggtcat tgcttctttg ggattggccc tgggccatat caacagtcag
      481 gccgtgtcgt tgatcatatt tgtgtttgtg atcacttcca ccacctccac ctacatgatt
      541 acctacaacc atcaactggc ggccggttta agtcgcgtgc tgtcggtgtt acgtatcaga
      601 gacctgggaa tgaacatcgc tgagccgacg gccgcatctc ctaagcgagt ggttttcctc
      661 ggattctttc gcgaggcaag cgccattgtt cacgagtttg aattgagtgg aagtgaaaat
      721 cagccccatc cgttactcga cgagatgctg gtcattgatt tcaacccggt ggtttactcg
      781 gagttaaaac ggcgcggtat tgagtgcgtc tacggtgacg tagcccacat ggacacgctg
      841 catcatgcca ggattcacga cgcggaggtc gtcatctcaa cgattcctga tcacattcta
      901 aaaggaactg acaaccagcg gctgctgaaa aagatccgtc aattgtcgcc cgacgcacac
      961 atcatcgtta cggcagacag cccgcgcgcc gcgatcgatc tttatgaccg aggcgcagat
     1021 ttcgtcttca ttccccgcat ccattcttca agcgaggtcg caagagtgat cgaaaatgga
     1081 ctcagtgacg ggttcaagaa actgcgggat gagcagcttg cacatttgcg cacgcgcgac
     1141 gagattctgg cctgaggttt cggaagcttt gccgcaagag tctgagagtc tttctctgat
     1201 tcacactggg cttcagcccg gtgatgaaag accgtgagaa tcatagaaac cgttttcaac
     1261 ggcttcatat agttgactca cgtgccaccg cgaatacgaa cgagcgcgcg gagcgcgtcg
     1321 gagcataaag cccggggcgt aagccccggg atcgccggcc aaaaggatcg cgtagcccgc
     1381 ggagcgggcg acagatcaca tgaagtttcg ataacgggct gtcgcccact ccgtgagctg
     1441 ggcacacttg caatctccat cctggggctt acgccccagg cttcatgctg atgcccactt
     1501 cgcgggctgg tgagtcaagt atgttattac cgttaaaacg gttcagtcgt ctcgtgcgct
     1561 gcttatcacc gggctaaagc ccggtgtgaa cgagactgct tctcggactt ttgaggcaaa
     1621 gcccattttg gcgaactccg tgtcagtcac ttgaagctgc ttgcatgttc cgccgccgct
     1681 tttccaggaa acgtctttcg gcgtcattgc tcgtcaattc gagcgcgcga gtgtagctcg
     1741 cggcggcctc tttgttcgat ccacttcgac gcaaaaggtc cgcgcgcgcg gcgtgcagca
     1801 ggtggtaatc atcaagctcg ccggaggcca tcaggtcgtc aatcaagcgg aggccgcgct
     1861 ccggcccatc agccatagct acggcaacgg cgcgattaag cgaaacaatt ggtgatggtt
     1921 gaaggctcgc cagtcgatcg taaagctcta caatctgtcg ccagtccgtc tgttccgagc
     1981 gttgagcttt acaatgttcg gccgcaatcg cggcctgcac cgcgtatggg cccgccgcgg
     2041 gtgatgcgat tgcctggcta accagaggaa gggcctcggc gatttggctc tgattccaaa
     2101 gcgcgcgatt ctgctcttcc agcacaacga gatcgccggc ttcatctacc cgcgcgtcac
     2161 ggcgcgagtc atgtaacagc atcagcgcca ataagccagg gacttcggca ggcggatacg
     2221 gcgccagcaa cactcgcacg atgcgggcca ggcgaatcgc ttccccgcag agatcggtgc
     2281 gcaacaaacg ttctccatga gtcgatgcgt aaccttcgtt aaagaccaga tagatgaccg
     2341 tcaagacggc gtcgagcctt tgacgaatct cgcttgcgtc cggaatcttg taaggaatac
     2401 ctgcgtcgcg aatctttcgc ttcgctctca ccaggcgttg cgccatcgtt gtggccggca
     2461 cgagaaaggc acgcgcgatc tcatcagttt ccaaaccgca aagcgtgcgc agcgttagag
     2521 caacttgcga ttccggcgcc agcgcggggt gacaacacgt gaagattagc cgcagtcgat
     2581 cgtcgggaat ttcatggtcc gtcagctccg gctgctcagt tgtggtcggc tgctcttgcg
     2641 cgtaggattc ggccttctct tgaaaccgag tttggcgcct gagccgatcg acggctttgt
     2701 gcttcgcagt ttgaattatc caggcggctg gagatgccgg cacgccttcg ttcggccact
     2761 gctttacggc ggcggcgaag gcctcttgcg cggcgtcttc ggcaacatca aagtcgccgc
     2821 agagacggat cagcgtcgcc acgatgcggc cccaatcggc tcga
//
LOCUS       DATDBY010000215         2086 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2058322, whole genome shotgun sequence.
ACCESSION   DATDBY010000215 DATDBY010000000
VERSION     DATDBY010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2058322"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..732)
                     /gene="fabD"
                     /locus_tag="VIT19_04015"
     CDS             complement(<1..732)
                     /gene="fabD"
                     /locus_tag="VIT19_04015"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: protein motif:HMM:TIGR00128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEY5838178.1"
                     /translation="MSIAFMFPGQGSQNPGMGKDLADKFPAARQVFEEADEALGFALS
                     DLCFNGPAAELQLTENTQPAILTTSVAALRAIESEGFQKPDFVAGHSLGEYSALVAAG
                     ALSLTDAVRTVRKRGQYMQEAVPVGTGAMAAILGADVETVAAACVEAAQGEVCSAANI
                     NSPNQIVIAGAAAAIDRAIEIVKARGAKRAVKLNVSAPFHCAMMMPAQERLALDLREL
                     EFKDLATPVVTNVDGRPINKGADARD"
     gene            complement(797..1783)
                     /locus_tag="VIT19_04020"
     CDS             complement(797..1783)
                     /locus_tag="VIT19_04020"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: protein motif:HMM:TIGR00747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEY5838179.1"
                     /translation="MSNVRAGILGTGHAYPSGILTNADLEKIVDTTDEWIFTRTGIKQ
                     RRKAAPGEYTSQFATRASQQAIERAGIDPADIDLILCATVTPDQILPSTACLIQAQLG
                     ASKAAAMDIVAACSGFVYGVTIAEPMIRSGQIKYALVIGAELLTRYVDYTDRGTCVLF
                     GDGAGAAILGPVEGDRGILAAKIRSDGRYEEQLYAPGGGTKGGFSAETIARGDHFFKM
                     KGNEVFKIAVRSMSDISKQVLCEAGLTTEDVNLFIPHQANQRITEAVANMLKVDPALV
                     YSNISQHGNTSSASIPICLDECVQAGRIKTDDIVLMASFGGGFTWGGVVMRW"
     gene            complement(1887..>2086)
                     /gene="rpmF"
                     /locus_tag="VIT19_04025"
     CDS             complement(1887..>2086)
                     /gene="rpmF"
                     /locus_tag="VIT19_04025"
                     /inference="COORDINATES: protein motif:HMM:TIGR01031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEY5838180.1"
                     /translation="VGVIMPNPKRRHSKSRRGKRRAHDALRIPQTVVCPNCQEPRMPH
                     RVCPKCGFYKGREVIHIEQAA"
BASE COUNT          418 a          645 c          567 g          456 t
ORIGIN      
        1 gtcacgggca tctgcgcctt tgtttatcgg ccgcccgtca acgttcgtca cgaccggggt
       61 cgctaaatct ttaaactcga gttccctcag atcgagggcc aaacgttcct gcgccggcat
      121 catcatggcg caatgaaaag gagcgctcac gttgagtttc accgctcgct ttgcgccacg
      181 cgctttcacg atttcgattg cgcggtcgat tgccgcggcg gcgcccgcga tcacgatctg
      241 gttcggcgaa ttaatgtttg cggcgctgca aacctcacct tgcgcagctt caacgcaagc
      301 cgcggcgacc gtctcaacat cggcgccgag aatcgccgcc atggcgcccg tccccacggg
      361 caccgcctct tgcatgtact ggccgcgttt gcgcacggtg cgcacagcgt cggttaacga
      421 caacgcgccg gcggctacca gtgctgagta ctcgccgagg ctatgaccgg caacgaaatc
      481 gggtttttga aagccttcac tctcaatggc cctgagcgct gctacggaag ttgtcaggat
      541 cgccggctga gtgttctcgg ttagttgcag ctccgcggcc ggcccgttga aacacaaatc
      601 cgacagcgcg aaaccgagtg cttcatccgc ttcttcaaag acctgtctgg ccgcaggaaa
      661 cttgtcggcc aaatcttttc ccatgcccgg attctgcgac ccctggccgg gaaacatgaa
      721 tgcaatactc atctgcggta cgcacgcctc cggcgtgccg cttttaattt catagcacgc
      781 cagcggcgtg cgtacctcac catcgcatta ccacgccgcc ccacgtgaag ccgccgccga
      841 atgaagccat cagcacaatg tcatctgtct tgatgcgacc ggcttgcacg cactcatcca
      901 aacaaatcgg aattgaagcc gatgaagtgt tgccgtgttg cgaaatattc gaatacacga
      961 gcgcgggatc gaccttcagc atgttcgcca ccgcctcagt gattctttga ttcgcctgat
     1021 gcggaatgaa caggtttacg tcttcggtcg tcaacccggc ttcgcaaagt acttgtttcg
     1081 agatgtcgga catcgaccgc acggcaatct tgaagacttc gttgcctttc atcttgaaga
     1141 agtggtcgcc acgcgcgatg gtctcagcgc tgaagccgcc ctttgttcct ccacccggag
     1201 cgtaaagctg ttcctcgtat cgaccgtcag agcgaatctt tgccgccaga atcccgcggt
     1261 caccttcgac cgggccgaga atcgcggctc ccgcgccatc gccgaacaga acgcacgtcc
     1321 cacgatcggt gtaatccacg taacgcgtca gaagttcggc gccgataacc agcgcgtact
     1381 taatctggcc gctgcgaatc attggttcgg cgatggtcac accgtaaaca aagcctgagc
     1441 atgcggccac aatgtccatc gccgccgctt tgctcgctcc aagttgcgcc tgaatcaagc
     1501 atgccgtcga aggcagtatc tgatccgggg tcactgtcgc gcacagaatc aaatcaatgt
     1561 cggctggatc gatcccggcc cgctcaatgg cttgctgtga cgcacgcgtg gcgaactgcg
     1621 aagtgtattc acccggcgca gccttccgcc gctgcttgat accggtgcga gtgaaaatcc
     1681 actcgtccgt ggtgtcaaca atcttctcga ggtcagcgtt ggtcagaatc cccgacggat
     1741 aggcgtgacc ggtgccgaga attcctgcgc gaacgttcga cattagttag tttgttggac
     1801 tgcctgcttt tgaagaccgt ttagaggcgg aacgtgtccc gccaaacgcc gcaccggggc
     1861 ggctgctaaa cggctgaaga gtttgatcaa gcagcctgtt ctatgtgaat cacttcgcgg
     1921 cctttgtaga agccgcactt cggacacacg cgatgcggca tccgcggctc ctggcagtta
     1981 ggacaaacaa ccgtttgcgg aatgcgcagc gcgtcgtgcg cccggcgttt gccgcgtcgt
     2041 gacttcgaat ggcgacgttt tggatttggc ataattactc caactt
//
LOCUS       DATDBY010000216         3391 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1507348, whole genome shotgun sequence.
ACCESSION   DATDBY010000216 DATDBY010000000
VERSION     DATDBY010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3391
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1507348"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            474..710
                     /locus_tag="VIT19_04030"
     CDS             474..710
                     /locus_tag="VIT19_04030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838181.1"
                     /translation="MFYGQASIARNTAHSEGVNRVVPGNRYEANTVRHNDVFALAEDA
                     KASLLESAHSIEVIDAGNLRHVRPPPSPHGRLAL"
     gene            complement(955..1392)
                     /locus_tag="VIT19_04035"
     CDS             complement(955..1392)
                     /locus_tag="VIT19_04035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838182.1"
                     /translation="MDHSLMVDGESIRCPDGQTIPLADLRDVSAPRILIGVDPSLHSG
                     GISSGDLSGAVVVLKYQRHGVKGPPLVKLVPVASFAEADEIVSRIQTARKSARQGDGP
                     AKVVAGKCENCGRELRVKASAVRPSMNLTCKCGSANRITTPSS"
     gene            complement(1499..1828)
                     /locus_tag="VIT19_04040"
     CDS             complement(1499..1828)
                     /locus_tag="VIT19_04040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838183.1"
                     /translation="MPKNKLVTVLIVVALFLLVPFLIGRITVAVLNATYPLPAPPSTT
                     ANYNSPSLPLADRIAALRAEAEAASRSLERARAITRIALVVIGVYYVALIAALIIRAR
                     KRRLQRA"
     gene            complement(1875..2261)
                     /locus_tag="VIT19_04045"
     CDS             complement(1875..2261)
                     /locus_tag="VIT19_04045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838184.1"
                     /translation="MSLFKKLFGTGSPLKLRRKQLQEMAEGVSSEAFLIQELTTAKAA
                     AIAGGLSEEDAARVLAKVFSYYYCLHRSLFIESFHHIPPPPLLKYVIVTTQASDVLAK
                     APGPYPDAVRSWVIEYWRDFFTAYGC"
     gene            complement(2351..2863)
                     /locus_tag="VIT19_04050"
     CDS             complement(2351..2863)
                     /locus_tag="VIT19_04050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838185.1"
                     /translation="MEVSQAKNIFPAFLLAVSICLIVSCHSQRPAEIEGPASFLETRI
                     TTKTTAEDIRRELGSAGERQLIEYLPPLRELTYERWGIRVVCDVGGNLRSLHVSKRWL
                     NTIHGVRVGDDLNTLRTTVKIEEPVDAGDQLLALTEHSGWSIKVDKETGQRVESIFFL
                     DKNAPLYMPR"
     gene            complement(2944..>3391)
                     /locus_tag="VIT19_04055"
     CDS             complement(2944..>3391)
                     /locus_tag="VIT19_04055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838186.1"
                     /translation="TAMKLTTWEGGGFMLEGQTTKTFCFVEPEGQQFRARITAVEGWP
                     DDFDFEAYEGCGATEGEAIEKLTNSLPPEPAPRIPPNHKPCVLCGLEVGFWPVPGRNK
                     VSMRFTHGLPDVYIVCDTCYISDDTEALCGRIFAVPEARRLQSLAE"
BASE COUNT          777 a          927 c          909 g          778 t
ORIGIN      
        1 attgtccagg ctcttccttg aaaacaaagc cgacacgatc gccctgcaac ggccagcggt
       61 cgctgctatt gggactgttg cagtggcggc agtgtagatc gtttgccaaa agggaaatgt
      121 gcatcggttg acctcctgat attgaagcat tggcccaacg tcagcatgag gcgccttgaa
      181 ttcgattcga tcgatgtcag cggctgtcag tgcaacgccg ccctggcgaa caccgcaggc
      241 gcggaactaa acaaaaaagt cagaccgaga agcaagcatt ttgctgggcc gagtcaggtc
      301 attttgggtt tccaaaattt gcggccgcag tgtagttcgc tggttttggc gggtcaaggc
      361 ttagtctgag ttgaccaggg cgcgcgcgaa tcaatcaaat tcgcaatccg caaatcactt
      421 gcgccgatcc gacgagttgt tggatgccgt cttagttaga gaagattttt gaattgttct
      481 acggacaagc cagcatcgcg cgcaataccg cccatagtga aggcgttaac cgggttgtgc
      541 cggggaatcg ttacgaggcg aacaccgtcc gacataacga tgtgtttgct ttggcggagg
      601 atgcgaaagc cagccttctg gagagcgcgc acagcatcga ggtgattgac gccgggaatc
      661 ttcggcacgt cagaccgcca ccctcacctc acggacgtct tgccctttga cgaggtcgtc
      721 tatggcagcg aggtattcgc gaatagcgtc ctggatattt gcgagggcct cgtcttcggt
      781 cgcgccttga gaccaacaac cgggcaggcc tggacaagaa acgctgaacc cttcctccga
      841 ttcttgaacg acaaccttgt aatccataag acctccgccg cgattatatc cccttggatt
      901 atttgaaagc catccaaccg cgactgttta tgttccgccc acgtccaacg attgttagga
      961 gcttggggtc gtgatgcgat tcgcgctgcc gcatttacag gttagattca tggagggtcg
     1021 aactgcgctc gccttaaccc gaagctcacg accgcaattt tcacatttac cggccacgac
     1081 ctttgccggc ccgtctccct gacgggcaga tttccgagcg gtctgaatcc gcgaaacgat
     1141 ctcgtcggcc tctgcaaaag aagccacggg aacaagcttg accaggggtg gacccttcac
     1201 gccatgacgc tgatatttga ggacaacaac cgcgcctgag agatcacccg agcttatccc
     1261 gcccgagtga agagacggat ccacgccgat cagaattcgc ggcgccgata catcccgaag
     1321 gtccgccaac ggaatcgttt ggccatcggg acagcgaatc gattcaccat caaccatcag
     1381 ggaatgatcc atatgctacc tcctcataag gggtccctgc gtccaacgtt agatttgagc
     1441 gagcggcgcg attcttatca ctgacggcgg aaaagaacaa gagccggtac gggccgattc
     1501 aggcgcgttg taatctgcgt ttccgcgccc tgattatcaa cgctgctata agcgcaacgt
     1561 aatagactcc gatgacaacc agcgcaatgc gcgttatggc tcgtgcgcgt tcaagtgatc
     1621 gacttgcagc ctcggcttcg gcacgcagcg ctgcgatgcg gtccgcaagc ggcaaagaag
     1681 gagagttgta gttggccgtt gtcgaaggcg gggcgggcaa aggataggta gcgtttaaga
     1741 cggctacggt aatacgtccg atcaggaacg gcaccagtaa aaagagcgcg acaactatta
     1801 gaaccgtgac gagtttattc tttggcatat cgccctccga agactaagta gggttgcagt
     1861 taaccggcgg cttattaaca tccgtacgcg gtaaaaaaat cgcgccagta ctcgatcacc
     1921 caggagcgaa ccgcgtcggg atagggacct ggcgctttag caagcacatc actcgcttgc
     1981 gtcgtgacga tcacatactt taggagtggc ggcggcggta tgtgatgaaa gctctctatg
     2041 aagagtgaac ggtggaggca gtagtagtac gagaacacct ttgccagcac tctcgcggcg
     2101 tcctcttcag aaaggccgcc agcgattgcg gctgcctttg ccgtcgtcag ctcctggatg
     2161 aggaaggctt ctgacgaaac gccctcagcc atttcctgaa gttgtttgcg ccgcaatttt
     2221 aacgggctgc ctgtgccaaa tagtttctta aacaagctca tggttttctc ctgctccgca
     2281 gcttgtcgcg tgcctttaac gtaaccctgc caatcgccct gaatattgtt ggacagtaag
     2341 ttctaatgtt tcatctcggc atgtacagcg gcgcgttctt atccagaaag aaaatgctct
     2401 caacccgttg tccggtctct ttgtcaacct taatggacca gccggaatgc tcagtcagcg
     2461 ccagcaattg atcaccggca tcgacaggct cttcgatttt tactgtggtc cgaagcgtat
     2521 tgagatcatc gcccacgcgt acaccgtgaa ttgtgttcag ccaacgtttc gacacatgca
     2581 gagatcgcaa gtttccaccc acgtcgcaca ccacacgaat accccagcgt tcatacgtga
     2641 gctcacgtaa tggcgggaga tactcgatca gctgtcgttc tccggctgac cccaactctc
     2701 tacggatgtc ctctgctgtc gtctttgtcg ttattcgcgt ttccaggaat gatgccggac
     2761 cttcgatttc ggccggcctc tgtgagtgac atgaaacgat gaggcaaatg ctaaccgcca
     2821 aaaggaaagc aggaaaaatg ttcttagcct ggctgacttc catttgttgc tatcgtgtct
     2881 tcgaaaaagt gatttccgaa ccgacataag cgccgtacgt gcgccaggag ctaccgatcc
     2941 catttattct gccagcgatt gaagtctcct tgcttcgggc accgcaaaaa ttcgaccgca
     3001 cagtgcttcg gtgtcgtcgc tgatgtagca cgtatcacag acaatgtaga catcaggtaa
     3061 accgtgggta aaccgcatag atactttgtt ccggccgggc acgggccaaa agccgacttc
     3121 aaggccacac aggacacaag gtttatggtt cggagggatg cgcggcgcag gttctggggg
     3181 cagactgttg gtcagcttct caatcgcttc gccttctgtg gcgccgcagc cttcgtaggc
     3241 ttcaaagtcg aaatcgtcag gccagccttc gacggctgtt attcgcgcgc gaaactgttg
     3301 tccttctggc tccacaaaac aaaatgtctt tgtggtttga ccttcaagca tgaatcctcc
     3361 gccctcccaa gttgtgagtt tcatggcggt g
//
LOCUS       DATDBY010000217         2212 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1806038, whole genome shotgun sequence.
ACCESSION   DATDBY010000217 DATDBY010000000
VERSION     DATDBY010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1806038"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(382..1281)
                     /locus_tag="VIT19_04060"
     CDS             complement(382..1281)
                     /locus_tag="VIT19_04060"
                     /inference="COORDINATES: protein motif:HMM:NF016142.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HEY5838187.1"
                     /translation="MTNDLINLDREVALALTANQPVVALESTVIAHGLPRPQNLETAV
                     RLEEIVRAENSTPATIAVIEGKLCVGLDGEQRELIANESDIKKLSTRDLPIAVARRWN
                     GATTVASTMWIAHRAGIRVFATGGIGGVHRGSLPDVSADLPELARTPMIVVCSGAKIV
                     LDLPATREWLETHSVTVVGYECDELPAFYSRRSSLPVDVRCDSPKEVVGIFNAQRELE
                     MESALLVTVPVPVEAEVDSDLLQRVLDDSLAEAERQRITGRDLTPFLLARMAEQSAGA
                     TLRANIALLENNARVAAQIARAL"
     gene            complement(1377..>2212)
                     /locus_tag="VIT19_04065"
     CDS             complement(1377..>2212)
                     /locus_tag="VIT19_04065"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5838188.1"
                     /translation="FEFTVARAPFPWTSTALGVLLLLALIALVWGYAQNRRIHRTSAE
                     LAGANRELADARLRLANETEAERRRIARDLHDQTLADLRHLALLVDQIPLNAATARPN
                     RAPSAPNALRAEIESISHEVRRICEDLSPSALENVGLSAALQFALAHAVEQAAPECKF
                     EYDFVCDDAIEEKLQLSQSTQIQIYRIAQEALSNICRHANAKRVKMSAGIAAGNQFEL
                     QIEDDGRGYDEADTRKNSGRGVANIRTRASMIHADASWAKRNGGGTVFSLRKNDGKGV
                     A"
BASE COUNT          442 a          675 c          621 g          474 t
ORIGIN      
        1 atctgcggct catgttgcct cctactagtt cgtttagaaa acggacttct ccgccgacgc
       61 tgggacaagt tccagctcta aaacgaacga actttttaaa attcatttgc gagcctggag
      121 atgctcgact taagaccacc ggcatcggca aacttgagtc tgccgattac ctgctcgcag
      181 cctggcgagc aattcgagga gttgcgcgtg agatgaaatg atccggttga tggttgtcac
      241 gcggcgagaa aaattcttgg aggctccgtc caaaaaatcg gatcggaaat tttagaggga
      301 ggtacgcacg cctcaaaggt acgcacgcct ctggcgtgca agcacgcggg acgcctatgg
      361 cgggggcgtg cgaactgagg ctcaaagtgc gcgggcgatt tgcgccgcaa cgcgcgcgtt
      421 gttttccagc aaagcgatgt tcgcgcgcag tgtcgcaccc gcgctttgct cggccatgcg
      481 cgcgagtaaa aacggtgtga gatcgcggcc ggtgatccgc tgacgttcgg cttctgctaa
      541 tgaatcatca aggactcgct gcaaaagatc agagtctact tccgcttcga cggggaccgg
      601 cacggtcacg agcaacgctg attccatttc cagttcacgc tgcgcgttga aaatcccgac
      661 cacttctttt ggcgaatcgc agcggacatc aaccggcaag ctgctgcgac gcgaatagaa
      721 ggccggcagt tcatcgcact cgtaaccgac gactgtgaca ctgtgtgttt ccagccattc
      781 gcgcgtcgcc ggcaaatcta aaacaatctt cgcgcctgaa cacaccacga tcatcggcgt
      841 gcgcgccagc tccggcaggt ccgcggacac gtccggcaac gatccccgat gaacaccgcc
      901 gattccgccg gtcgcaaaca ctcggatccc ggcccgatgt gcaatccaca ttgtcgaagc
      961 gacggttgtt gctccgttcc accggcgcgc cacggcgatc ggcagatcgc gcgtgctgag
     1021 cttcttgatg tcactttcgt tggcgatcag ttcgcgttgc tcgccgtcta atccgacgca
     1081 cagcttccct tcaatcacgg caatcgttgc cggagtcgaa ttttccgcac gcacaatctc
     1141 ttccagacga accgcggtct ccaggttctg cggccgcggc aaaccgtgcg cgatgaccgt
     1201 ggattccagc gcgacgacgg gctggttcgc ggtaagcgct aacgccacct cgcgatcaag
     1261 attgattaga tcgttcgtca tgctacggag tcagtaccag ctgcgtgagc agctgggatc
     1321 ataattcagc ttgcgttgag caattgatcc atccgctaac gcggatggta ctgacttcat
     1381 gccactccct taccgtcatt ctttctcagt gagaacactg tcccgccgcc gttgcgcttt
     1441 gcccaggatg cgtcggcgtg aatcatgctg gcgcgcgtgc gaatgttggc gactccccgg
     1501 cccgaattct tgcgcgtgtc ggcttcatca tagccgcgcc cgtcgtcttc aatttgcaac
     1561 tcgaactgat tgccggccgc gatgcccgcg ctcatcttca cgcgctttgc gttggcgtgg
     1621 cgacagatgt tgctcaacgc ttcctgcgcg attcgataga tctgaatctg cgtgctctgg
     1681 gacaactgaa gtttttcttc aattgcgtcg tcacagacaa aatcgtattc aaacttacat
     1741 tcaggcgccg cttgctcaac tgcgtgcgcg agcgcgaact gcaacgccgc cgacagcccg
     1801 acattttcga gtgccgatgg actcaggtct tcgcatatgc gccttacctc gtgtgaaatc
     1861 gattcgatct cggcgcgcaa agcattggga gctgagggcg ctcgattcgg gcgcgccgtc
     1921 gctgcgttca acggtatctg atccacaagc aaggcaagat gccgcaaatc cgccagcgtc
     1981 tgatcgtgca ggtcgcgcgc gatgcgccgc cgctcagctt ccgtttcgtt cgcgagtcgc
     2041 aggcgcgcgt cagccagctc tcgattggcg cccgcgagtt ccgcactcgt ccgatgaatg
     2101 cgccggttct gcgcgtaacc ccacaccagc gcgatcagcg ccagcagcag gagaactccg
     2161 agcgccgtcg aggtccatgg gaatggcgcg cgggcaacgg taaattcaaa cg
//
LOCUS       DATDBY010000218         2498 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1094383, whole genome shotgun sequence.
ACCESSION   DATDBY010000218 DATDBY010000000
VERSION     DATDBY010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2498
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1094383"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..803)
                     /locus_tag="VIT19_04070"
     CDS             complement(<1..803)
                     /locus_tag="VIT19_04070"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY5838189.1"
                     /translation="MEFELTEEQQQMKMSVREFAESEIAPHVMEWDEAQHFPIELQPK
                     LAELGLLGVLFPEEYGGTGLGYVEYATVIEELSRVDGSVGISVAAHTSLCSNHIFQYG
                     TEAQKQKYLVPLASGEHIGAWGLTEPGAGSDASGTRTTAVRQDGGWLINGAKNFITHA
                     IHGNTCVAFASSDRAKGSKGITGFIFEKGMKGFSPSKKENKLGLRASETASVVFEDCF
                     VPDDNRIGEEGMGFVNAMEILDGGRISIAALAVGIAQGAYESAVRYSGER"
     gene            complement(881..1666)
                     /locus_tag="VIT19_04075"
     CDS             complement(881..1666)
                     /locus_tag="VIT19_04075"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEY5838190.1"
                     /translation="MEERLQKLIAAAGIASRRHAEELIKAGKVAVNGAVVTELGTKAN
                     PETDHIKVNGRLINRLLEPKEKVYVLLNKPKGYLSSLSDPKGRPLVTQLVPGSLGRLH
                     PVGRLDFNTEGLLLLTNDGDFTNHVTSAKNRIPKVYRVKVKGIPTENAIERLRRGVRL
                     DDGVRTAPAEILPLEQTGVNAWFEMTLHEGRNQQIRRMFDAIGHSVLKLSRERIGPLN
                     YSRMKPGEWRLLLPVEVKRFYRPSREPSRQTKRPRRRLRVSSR"
     gene            complement(1679..2299)
                     /gene="scpB"
                     /locus_tag="VIT19_04080"
     CDS             complement(1679..2299)
                     /gene="scpB"
                     /locus_tag="VIT19_04080"
                     /inference="COORDINATES: protein motif:HMM:TIGR00281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEY5838191.1"
                     /translation="MSEAKAAVEIEIEIEPVEADEIEGTREISATELKSITEALIFVA
                     DEPLDPKMIARVLRVERPAIEEAIQSLVEEYASRSGGLQLREIAGGWQISTQPEHHEH
                     VRAYLKSKPSAKLSLASLETLAVIAYKQPVTVPEILEIRGVQSPSAIKTLLDKRLIVA
                     KGRKETVGRPMMYGTSKEFLIQFGLKDLSELPSIEDFQDLAGAANE"
BASE COUNT          509 a          751 c          650 g          588 t
ORIGIN      
        1 cgctcgcccg aatagcgcac cgccgattcg tacgcgcctt gagcgatccc cacggcgagg
       61 gccgcgatcg aaatgcgtcc tccgtcgaga atctccatcg cgttcacaaa gcccatgcct
      121 tcttcgccga tgcgattatc atccggcaca aaacagtctt cgaataccac actcgctgtt
      181 tctgaagcgc gcaacccgag cttgttctct ttctttgaag gcgagaagcc cttcatgcct
      241 ttttcaaaaa tgaatccggt aatgccctta ctgcccttcg cgcgatcgct cgaagcgaac
      301 gccacgcacg tattcccgtg aatggcatgc gtgatgaagt tctttgcccc gttgattaac
      361 cagcctccgt cttgccgaac agccgtcgtg cgcgttcctg acgcatccga cccggcgccg
      421 ggttccgtta atccccacgc gccgatgtgt tcgccactcg caagcggcac gagatacttc
      481 tgtttttgcg cttcagtgcc gtactgaaag atgtgattcg aacaaagcga cgtgtgcgcg
      541 gcgacggaaa ttccaaccga gccatcaaca cgcgacaatt cttcgatcac cgtcgcgtat
      601 tcaacgtatc ccaggcccgt gccgccgtat tcctccggaa aaagcacgcc gagcaacccc
      661 aattcggcta acttcggttg cagttcaatg ggaaagtgct gggcttcatc ccactccata
      721 acgtgcggcg cgatctcgct ctcggcgaac tcgcgcacgc tcatcttcat ttgttgttgt
      781 tcttcagtaa gttcgaattc cattacagtg aaagagcctt acactcaaac gacaggccta
      841 agacgcctgt cgcagcatta atgcaactgt gtattgtaac ctaacgtgaa gaaactcgca
      901 gtctgcggcg cgggcgttta gtttgccgtg aaggttcgcg cgagggacgg tagaaccttt
      961 taacttcgac cggtaaaagg agacgccatt caccgggttt cattcttgaa taattgagcg
     1021 gcccgatgcg ctcgcgtgac agcttcaaga ccgagtggcc gatggcgtcg aacatgcggc
     1081 gaatctgctg attgcgacct tcgtgcagcg tcatctcgaa ccaggcattc actcctgttt
     1141 gttccaacgg aagaatttca gccggcgcgg tacgaacgcc atcgtcgagc cgcacaccac
     1201 gacgcaacct ttcaatcgcg ttctccgtcg gaattccttt gacctttacc cggtacactt
     1261 tcggaatgcg atttttcgca gacgtcacat gattggtgaa gtcaccatcg ttggtcagca
     1321 gaagtaaacc ttccgtattg aagtcgagcc gtcccaccgg gtgcaaccgg ccgagcgacc
     1381 caggaaccag ttgcgtgacc agcggccggc ccttcggatc agacaagctg ctcaaatacc
     1441 ctttcggttt attgagcagc acgtaaacct tctccttcgg ttccagcagc cggttgatga
     1501 ggcggccgtt gactttgatg tgatcggttt cgggattggc tttcgtgccg agttcagtga
     1561 cgaccgcgcc gttgaccgca actttgccgg ccttgatcag ttcttcggcg tggcggcggg
     1621 acgcaatgcc ggcggcggca attaactttt gcagacgctc ttccatcagt tgggaccatc
     1681 actcatttgc ggcgccggcg aggtcctgga aatcttcaat gctcggcaac tctgacaggt
     1741 ctttgagacc aaactgaatc aggaactctt tcgaagtgcc gtacatcatc ggccggccga
     1801 cggtttcttt gcggcctttc gccacgatca gccgcttgtc gagcagagtc ttgatcgcgg
     1861 agggtgactg aacaccgcga atctcgagaa tctcaggcac cgtgaccggc tgtttgtagg
     1921 caatcacggc cagcgtctcc agcgaggcta acgacaattt cgcgctgggt tttgacttca
     1981 gataggcacg aacatgttcg tgatgttccg gctgagtcga gatttgccag ccgcccgcga
     2041 tttcgcgcaa ttgcagcccg ccgcttcggc tcgcatactc ttcgaccagc gattgtatgg
     2101 cttcttctat cgccggacgc tcgacgcgca gaactcgcgc aatcattttc gggtcgagcg
     2161 gttcgtcggc aacgaagatc aaagcctcag taatcgactt caactccgtc gctgaaatct
     2221 cgcgggtgcc ttcgatctcg tcggcttcga cgggttcgat ttcgatctct atctccactg
     2281 ctgctttcgc ttcactcata aggttttaat tctttgagcc ctccctttag accaccccac
     2341 gcgggatgcc cgcgtgggga ccccggttgt cgggctactg ccccggctct ttaagccgga
     2401 ctgactgggc gcgcggtaat gtcgccgaac gtttcccgct gaaccaggga aatttcggca
     2461 aggcggacca gttccaacac tgagaggaat gcaacgac
//
LOCUS       DATDBY010000219         2134 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_638137, whole genome shotgun sequence.
ACCESSION   DATDBY010000219 DATDBY010000000
VERSION     DATDBY010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_638137"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..1199
                     /locus_tag="VIT19_04085"
     CDS             96..1199
                     /locus_tag="VIT19_04085"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5838192.1"
                     /translation="MSERKQTSESPHVVHVVPALFDAHDGIIGGAERYAFEMARHMAD
                     RTPTTLVTFGNQSRDEHTGNLKIRVIGKARYVRGQRTNPISTSLITELRKADVVHCHQ
                     QHVLASSLSALFCRLTARRVYVSDLGGGGWDISGYVSTDKWFNRHLHISEYSRKINGQ
                     SANPKASVIFGGVDLNKFSPDTSVPRNGKVLFVGRILPHKGIDDLIKALPEGLTLEVI
                     GRPYGEAYLRDLRAMADGKRVVFRHECTDDELVRAYRESMCIALPSVYRTMYGDETRV
                     PELLGQTLLEGMACEAPAMCTDVASLPEVVQSGVTGFVVPPNNPEALGAKLRWLREHK
                     AEARAMGVAARRRVMDKFSWPSVVDRCLEIYTA"
     gene            1205..>2134
                     /locus_tag="VIT19_04090"
     CDS             1205..>2134
                     /locus_tag="VIT19_04090"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5838193.1"
                     /translation="MIRHIITSEYPPQPGGVSDYTRIVAEGLAAAGDEVHVWCPQADG
                     PSPEFEGVVVHREMGRFTPRNLRDASRLLDQFPTPRHVLVQWVPHGYGYHSMNIGICL
                     WLWRRALRGDEVELMVHEPSLGFGEGSWKHNIVAAVHRLMTIILLRATRRVWVSIPAW
                     EERWRPYTLGRAIEFRWLPVGSNIPVAKAQPESPPIRQRYLNGSGRLVGHFGSYDANT
                     IELLLKSVSQLMKHDATLLLLGHGSDHMRAALIESNPALANRVHATGSLSAGELSRHL
                     VACDLMLQPYVDGVSSRRTSTMTALAHGVPVVTT"
BASE COUNT          433 a          608 c          639 g          454 t
ORIGIN      
        1 ctggcgaatc ggtatcccga acgttacgag cgacgctggg cgtggatttt tcccgcttgg
       61 tatctctatt tcgagttgca ggcgcaaaag gattaatgag cgagagaaaa caaacttcgg
      121 aaagcccgca tgtcgtgcac gtcgtgcccg cgttgtttga cgcgcacgac ggaattatcg
      181 gcggcgccga gcggtatgcg ttcgagatgg ctcgtcacat ggctgaccgc acgccaacca
      241 cgttggttac tttcggaaat cagtcccgcg acgagcacac cggcaatctg aagattaggg
      301 ttatcgggaa ggcgcgctac gttcgcggcc aacgcaccaa tccgatctct acttcgctta
      361 tcaccgagct gcgcaaagcc gacgtggttc attgtcacca gcagcacgtt ttggcaagca
      421 gcctcagcgc gctgttctgt cgcctgaccg cacggcgcgt gtacgtgagc gacctcggcg
      481 gcggtggttg ggatatttcc ggttatgtat caaccgataa atggttcaac cgccacctgc
      541 acataagcga atacagccgc aaaatcaatg gtcagtccgc taacccgaag gcgagcgtga
      601 ttttcggcgg cgtcgatctg aacaagtttt cgcctgacac ttcggtgccg cgcaacggca
      661 aggtgttatt tgtcggccgc atcctgccgc acaaaggcat cgacgactta attaaggcct
      721 tgcccgaagg cctgacgctc gaagttatcg gacggccgta cggtgaagcg tacctccgcg
      781 acttacgtgc aatggccgac ggtaagcgcg tcgtctttcg gcacgagtgc actgacgatg
      841 aacttgtgcg cgcgtatcgg gaatcgatgt gcatcgcgct gcccagcgtc tatcgcacga
      901 tgtacggtga cgaaacgcga gttcccgagt tgctcggtca gacgctgctt gaaggcatgg
      961 cgtgtgaagc accggcaatg tgcaccgacg ttgcgagtct tcctgaagtt gtccagagcg
     1021 gcgtcactgg tttcgtggtg ccgccgaata atccggaggc cctcggcgca aagttgcgct
     1081 ggctgcgcga acacaaagcg gaagcgcgcg cgatgggcgt tgcggcccgc cgtcgcgtga
     1141 tggacaaatt cagttggccg tcagtcgtgg atcgctgtct ggaaatttac accgcttaaa
     1201 agtaatgatt cgtcacatca tcaccagcga ataccctccg cagccgggcg gcgtgagtga
     1261 ctacacgcgc atcgtcgccg aaggtctggc cgcggccggt gatgaagtac acgtttggtg
     1321 tccacaggca gacggcccct cgccggaatt tgaaggagtt gtcgtccatc gcgagatggg
     1381 caggttcacg ccgcgaaatc taagagatgc gtcacgtctt ctcgatcagt tccccacccc
     1441 gcgccacgta ctcgtgcagt gggttccgca cgggtacggc tatcattcga tgaacatcgg
     1501 aatttgtttg tggctgtgga gacgagcgct acgcggtgac gaggttgagt tgatggtcca
     1561 tgagccgtcg ctcggatttg gtgaaggaag ctggaagcac aacatcgtcg ctgcagttca
     1621 tcgtctgatg acgatcattc ttttgcgcgc gacgcgtcgt gtttgggttt caattcccgc
     1681 gtgggaggaa cgttggcggc cttacacgct gggccgagca atcgagtttc gttggctgcc
     1741 cgtcggcagc aacatcccgg tagccaaagc gcagcccgaa tcaccgccga ttcgtcagcg
     1801 ctatttgaac ggcagcggcc ggctagtcgg ccacttcggc tcttacgacg cgaacacaat
     1861 cgaactgctt ttgaaatcag tctcgcaact gatgaaacac gatgcgactt tgctcctact
     1921 gggacacggt agtgatcaca tgcgcgccgc gctgatcgaa agcaatccag cgttggcgaa
     1981 tcgtgtccac gcgaccggca gtctcagcgc cggagagctt tcgcggcacc tcgttgcatg
     2041 cgatctgatg ttgcagcctt acgtcgacgg tgtcagcagc cgccgcacca gcaccatgac
     2101 ggctttggca cacggtgttc ccgtggtcac gacc
//
LOCUS       DATDBY010000220         2292 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2273008, whole genome shotgun sequence.
ACCESSION   DATDBY010000220 DATDBY010000000
VERSION     DATDBY010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2292
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2273008"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..823)
                     /locus_tag="VIT19_04095"
     CDS             complement(<1..823)
                     /locus_tag="VIT19_04095"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5838194.1"
                     /translation="MSLSSVPASIEIRLPGTARLLLLIPVLLAILIGWFCLRWQVGAT
                     VSEVATAGQTPNLELARVAARWAPDDPVVHWQLGAAARREFTANNIQETLREFEIAVR
                     LSPNDFRYWEELGRALEMSEDRAGAEKALRRAISLAPNYYHPHWRMGNLLLRSNRYEE
                     AFKHLFRAAEANQGLWPQAINLAWQAYDGDVERITTEACKDPNVRILFATYLVGLKHY
                     DDAARLWKTLTPDVRAKVAGPGRNLRKALLDAKQFRAALEVHRDLEPANPHAPEVL"
     gene            complement(831..>2292)
                     /locus_tag="VIT19_04100"
     CDS             complement(831..>2292)
                     /locus_tag="VIT19_04100"
                     /inference="COORDINATES: protein motif:HMM:NF025104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838195.1"
                     /translation="ITIFWLIGITNAINLLDNMDGLATGIAAIASGFLTLNFIASAQP
                     VEASLMAVFTGALIAFLVFNSTPASIFMGDSGSMFIGFFLASTSLINLSGGRSRSFLP
                     VLAVPILVLFIPIFDTTFVTILRKLSGRAASQGGRDHTSHRLVALGMSERRAVWMLYG
                     LAAISGLLAVAVREFRPDVSIALLFGFTIVLTLLGVYLAGVKAYDEEAQVMTAREKPR
                     FGFLIDFSYKRRIFEVLMDVGLIILAYWAAYALTLEGFSDSPARTLFLRTLPIVVVVR
                     LAAFLFFGVYRGIWRYTGIDDLVAFAKAVAAGSVVSVIIILFKFRFQGFSRAVFVVDA
                     MMMLMMLAGSRMAFRLFQQLLPTSAATQGRRVLIYGAGDAGELLLRELLNNRELRCTP
                     VGFMDDDPNKRGKVIHGLPVFGGNGMLHRIITHQKIEQILISSPGINDERTNEILREC
                     EAQNIELKRMAIRIESIREQGRPAGPFATLNGDSTT"
BASE COUNT          526 a          680 c          660 g          426 t
ORIGIN      
        1 aaaggacttc aggtgcatgc gggttggccg gttcgagatc gcggtgtact tcgagcgccg
       61 cgcgaaactg tttggcatcg agcagagctt tgcgcaggtt tcgtcccggg ccggcgactt
      121 tcgcacggac gtccggagtc agggtcttcc acaatcgcgc cgcatcgtcg taatgcttca
      181 agcccacgag ataggtcgca aaaagtatgc gcacattcgg atccttgcac gcttcggtgg
      241 tgatgcgctc gacgtcgccg tcgtacgctt gccatgcgag gttgatcgcc tgcggccaga
      301 gtccctggtt cgcctcagcc gcgcgaaaaa gatgtttgaa agcctcttcg taccggttcg
      361 accgcagcag caagttgccc attcgccagt gcgggtggta gtagttcgga gccagcgaaa
      421 ttgcgcgacg caaagccttc tcagcgcccg cgcgatcctc actcatttca agagcgcgtc
      481 caagctcttc ccagtagcga aaatcatttg gtgaaaggcg taccgcgatt tcgaactcgc
      541 gcagcgtttc ctggatgttg ttcgcggtaa actctcgccg cgccgccgcg cccaactgcc
      601 aatgaacgac cggatcgtcc ggcgcccaac gcgcggccac gcgcgcgagt tcgaggtttg
      661 gagtctggcc cgcggtggct acttcagaca cggtggcgcc aacctgccat cgcaggcaaa
      721 accagccaat gagaattgcc agcagcaccg ggataagcag cagcagtctg gcggttccag
      781 gtaagcgaat ttcaatactg gccgggacac ttgagaggga cattcggtgt ttaggtggtt
      841 gaatcgccgt tcagcgtcgc aaacgggccg gccggccggc cttgctcgcg aatgctttca
      901 attcggatcg ccatacgttt cagttcgatg ttttgcgctt cgcactcgcg cagaatttcg
      961 ttagtgcgtt catcattgat gccgggactc gaaattagga tctgctcgat tttttggtgg
     1021 gtgataatcc gatgcagcat gccgttgccg ccaaagaccg gcaacccgtg aatcaccttg
     1081 cctcgcttat tcggatcgtc gtccatgaac ccgaccgggg tgcatcgcag ttcgcgatta
     1141 ttgagcaact cgcgcaaaag caattccccc gcgtcgcccg caccgtaaat cagcacgcga
     1201 cggccctggg tcgcggcgct ggtaggcaaa agctgttgga acaaacgaaa agccatgcgg
     1261 ctgcccgcca gcatcatcag catcatcatg gcatcaacga caaagacggc gcgcgagaat
     1321 ccttgaaagc gaaacttgaa gaggatgatg atcacgctga cgactgagcc ggcggcgacg
     1381 gcctttgcga acgccaccag gtcatcgatg cccgtgtagc gccagatgcc gcgataaacg
     1441 ccgaagaaga gaaacgcggc gagccgcacc acgacaacta tcggcagggt tcgcaggaaa
     1501 agcgtccggg ccgggctatc tgaaaatccc tcaagcgtca aagcgtatgc ggcccagtaa
     1561 gcgagaatga tcagaccgac atccatcagc acttcaaaga ttcgccgctt gtacgaaaag
     1621 tcgatcagaa aaccgaaccg cggcttttcg cgggcggtca tcacctgcgc ttcttcgtca
     1681 taagctttta cgcccgcgag atacacgcct aaaagcgtta gtacgattgt gaagccgaac
     1741 aacagcgcga tactgacgtc cggcctgaat tcgcgtaccg ccaccgcgag gagtcccgaa
     1801 atggccgcga gcccgtaaag catccacacc gcgcggcgct cggacatgcc caaagccacc
     1861 agccgatgcg aagtgtgatc gcgcccaccc tgcgacgccg cgcgtcccga aagcttgcgc
     1921 aagatggtga caaacgtagt atcaaaaatc ggaatgaaca gaaccaggat cggaaccgcg
     1981 agcaccggca gaaaacttcg cgaccgcccg ccagagagat ttatcagcga tgtgctggcg
     2041 aggaagaacc cgatgaacat cgacccggaa tcgcccatga agatcgacgc gggcgtcgag
     2101 ttgaaaacca ggaaggcgat cagcgcccca gtgaataccg ccatcaggct tgcctcgacg
     2161 ggctgcgcgc tggcgatgaa gttcaaagtt agaaagcccg acgcaatcgc cgcaattccg
     2221 gtcgccaacc cgtccatgtt gtcgagcagg ttgattgcgt tcgtgatgcc gatgagccag
     2281 aaaatcgtga tc
//
LOCUS       DATDBY010000221         7432 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2284702, whole genome shotgun sequence.
ACCESSION   DATDBY010000221 DATDBY010000000
VERSION     DATDBY010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 7432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7432
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2284702"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..516
                     /gene="rplQ"
                     /locus_tag="VIT19_04105"
     CDS             <1..516
                     /gene="rplQ"
                     /locus_tag="VIT19_04105"
                     /inference="COORDINATES: protein motif:HMM:TIGR00059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEY5838196.1"
                     /translation="LRNLATSLINSRDERIITTVPKAKELRPFVERAITLSRHAASLE
                     GNGSEARGVHLRRQAAAFFHSGNFGRGSVTGRRGQVVAPRTAGVAALKRLFDELGERF
                     KDRPGGYTRIIKLGRRAGDGAELAIIELLGNPRDAAAEEASKKRAKGGAKKKAAEPKA
                     AEPKEASESEE"
     gene            661..1281
                     /gene="accB"
                     /locus_tag="VIT19_04110"
     CDS             661..1281
                     /gene="accB"
                     /locus_tag="VIT19_04110"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEY5838197.1"
                     /translation="MNDQESQQPSGEPSTDPRAERQRDRGRRRHRTLPKHLEASINMD
                     ELRELIGLINENALTDFELEREGFHVKIGRNLYPPQPAVPSVPPVAEQHAIPAATHSA
                     VQGVPHAGPPHPGAQAEEAASEDQGLHIITSPIVGTFYRSPSPTAESFVRIGSNVEPE
                     SVVCIIEAMKLMNEIQAEASGEVAKIYVENGQAVEYGQPLFGIKQG"
     gene            1364..2776
                     /gene="accC"
                     /locus_tag="VIT19_04115"
     CDS             1364..2776
                     /gene="accC"
                     /locus_tag="VIT19_04115"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: protein motif:HMM:NF006367.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEY5838198.1"
                     /translation="MNNGLRRFRKILVANRGEIACRIIWTCKEMGIGTVAVHSDVDRD
                     SLHVRFADESVCIGPAPSAQSYLNIPAIISAAELFNVDAIHPGYGFLAESAYFAEICE
                     ACNIKFIGPKPNIIQLMGEKVEARRAMKNAGVPILPGSPDALTSEEDAIKVAREIGYP
                     VIVKASGGGGGRGMRIVNAEDELGHALETASTEAAAAFKNADVYIERYMQRPRHIEIQ
                     VLADEHGNCVFLGERECSIQRRHQKLLEEAPAPMMTPELRQQMGDTAVAACKAIGYSS
                     AGTFEFLLDENNQFYFMEMNTRIQVEHPVTEMVTLTDIVRNQIRIAEGEPLGFTQDDV
                     IMVGHAIECRINAENPETFVPSPGKITTFNLPGGPGVRVDTYVYPEYRVPPFYDSLIA
                     KVIVHARTRELAIARMRRALEAMVIEGIKTTIPLHLKIMNDANFQAGNISTRFLDDFL
                     TTNGNRSAPTASAALTGAAA"
     gene            2837..3145
                     /gene="rplU"
                     /locus_tag="VIT19_04120"
     CDS             2837..3145
                     /gene="rplU"
                     /locus_tag="VIT19_04120"
                     /inference="COORDINATES: protein motif:HMM:TIGR00061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEY5838199.1"
                     /translation="MSFAIIRTGGKQFTVEKGGTLRVPSLGTEVGSSVDLEVLAVGEG
                     SETRVGSTLGEGAVAKATVVEHGRGAKIIVFKKKRRKHYKRTKGHRQGFTTLKIDSIG
                     "
     gene            3211..3480
                     /gene="rpmA"
                     /locus_tag="VIT19_04125"
     CDS             3211..3480
                     /gene="rpmA"
                     /locus_tag="VIT19_04125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEY5838200.1"
                     /translation="MAHKKGVGSSRNGRDSNSQRLGLKKFGGERVLGGNILARQRGTK
                     WKPGQNVGRGKDDTLFSLIDGFVKFEDKGRSGKFISVYPAQATAS"
     gene            3617..4690
                     /gene="obgE"
                     /locus_tag="VIT19_04130"
     CDS             3617..4690
                     /gene="obgE"
                     /locus_tag="VIT19_04130"
                     /inference="COORDINATES: protein motif:HMM:NF008955.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEY5838201.1"
                     /translation="MFIDRAKIRVQAGTGGSGVTAFRREKFVPRGGPSGGDGGRGGDV
                     WLVAEASLNTLLHLRYNPLHVAGRGMHGEGSNRSGKEGGDAIVRVPVGTQIFDPQTND
                     LLCDLQEDGARWLAARGGRGGFGNAHFATSTNRAPRYHQEGSPGEEFEFQLELKLLAD
                     VGLVGFPNAGKSTFISVVSAAHPKIADYPFTTLEPHLGVVDLGDFRTFVIADIPGLIE
                     GAHEGHGLGDRFLRHVERTKLLLHLVDVSSTSGRDSVSDYEVINRELAAYDEQLGERA
                     QFVVATKIDALDDPSRLERLRERAEQDGRPFFAISAVAGTGVRELLTAIAREIEEMRA
                     NVNTERSYHGEESLLVGSSATRF"
     gene            4737..5399
                     /gene="nadD"
                     /locus_tag="VIT19_04135"
     CDS             4737..5399
                     /gene="nadD"
                     /locus_tag="VIT19_04135"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: protein motif:HMM:NF000840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HEY5838202.1"
                     /translation="MGAKRAAIYGGTFDPLHNGHLRVARRVQKLFGLDELFFVPACVP
                     PHKRGAGITSAFHRFAMLVLATQVDEPLRVSTVELDNPERPYAVETVARMQEQLGTDY
                     RLFFVMGADSWSEITTWREWQRLLTMCDHIVVTRPGYELNTAATGANVIDLRGKTDDE
                     INVLVSQSASPRVFVTDAVFEDVSATAIRAATRQGDTNALTKMVPHEVATYIEKYGLY
                     RN"
     gene            5400..5915
                     /gene="rsfS"
                     /locus_tag="VIT19_04140"
     CDS             5400..5915
                     /gene="rsfS"
                     /locus_tag="VIT19_04140"
                     /inference="COORDINATES: protein motif:HMM:TIGR00090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEY5838203.1"
                     /translation="MSQNLKEKVLSSEAQAASTGRRASASEPANPADFDERIRWALHA
                     AAEKKALDLTVLDLRGVATFTDYFIISTGANKRQMQAIADEIVDQLKRRGSRAARVEG
                     YQGAEWILVDYGDFIVHVFDEKSRRFYDLEYLWREAKRLNVSPELLESVISNLKSEIS
                     NSAIPGSLKEE"
     gene            5915..6847
                     /locus_tag="VIT19_04145"
     CDS             5915..6847
                     /locus_tag="VIT19_04145"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY5838204.1"
                     /translation="MLELVALSEAMREAAAMAERVAATDANVLVTGESGAGKDALATF
                     IHAQSRRAHKAFVKIDCATLPSDLLEAELFGYERGAFTGASEAKPGRLEAAHRGTLVL
                     DEIAHLPLDAQAKLLRVIEQREFERLGGRKTISVDARLIALTNADLKNAVERRAFRDD
                     LFYRLNVVHILVPPLRDRQKDLEPLARLFAATYAQKHGTRAKKISPEALSYLKSYDFP
                     GNVRELANIIERAVIVADGSSIEPGHLPDGLRAAAERRARENRPLTLAEIEANYIREV
                     LAASKGNKTEAARILGISRKNLYERLARESKDEG"
     gene            6965..7423
                     /locus_tag="VIT19_04150"
     CDS             6965..7423
                     /locus_tag="VIT19_04150"
                     /inference="COORDINATES: protein motif:HMM:NF014629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEY5838205.1"
                     /translation="MKLRFIWPGKTKDERLRSLIDDYLKRLSRFVRCEIVEVKESRTR
                     DAGAVTKESQRIIDAIGDSSLAVLLDLNGSDWSSQELARQVQRWENDGTKAVAIVIGG
                     PEGVSTEVQSRAHARWRLSRLTLTHEMARVLACEQLYRAFAINRGLPYQK"
BASE COUNT         1598 a         1954 c         2341 g         1539 t
ORIGIN      
        1 ctgcgaaacc tcgcgacgtc cctaatcaat tcgcgcgacg agcgcataat cacgacggtc
       61 cccaaggcca aagagctgcg cccgttcgtt gagcgcgcga tcactctgtc gcgccatgcg
      121 gcgagtctcg aaggcaacgg atcggaagcg cgtggcgtgc acctgcgtcg tcaggcagcc
      181 gcgttctttc actcgggcaa ttttggtcgc ggctcagtga ccggccggcg cggacaggtt
      241 gtggccccgc gcacggcggg agtagcggcg ctcaagcgtt tgttcgacga gttgggcgag
      301 cgcttcaaag atcggccagg cggctacacg cgcatcatta agctgggccg ccgcgcaggc
      361 gacggcgctg agctggcgat catcgagctg ctcggcaatc cgcgcgatgc cgccgctgaa
      421 gaggcctcga agaagcgcgc caagggcggc gcaaaaaaga aggctgctga acccaaagcc
      481 gcggaaccca aggaagcgtc cgaatccgaa gaataaagaa ctttcagcgc gaagctccgt
      541 ctggcctttt gccatcgcgg ggcttttgct ttaatagagc tacttgcata atgacgcccc
      601 gctggtttgc ggcgaaaccc acccccggag gtttctatgt cggttggagc taaaagagcg
      661 atgaacgatc aggaaagcca gcaaccttca ggcgaaccat cgaccgatcc gcgggctgag
      721 cgccagcgcg atcgcggtcg gcgccggcat cgtacgttgc cgaagcatct ggaagcttcc
      781 attaatatgg acgagttgcg cgaattgatc ggcctgatca atgaaaacgc gttaactgac
      841 ttcgaacttg agcgggaagg gttccacgtg aagattgggc ggaaccttta tcccccgcaa
      901 ccagccgttc cttccgttcc tccggtcgcg gaacagcacg cgatcccggc cgcgacacac
      961 agcgccgtgc aaggtgtgcc gcacgcaggt ccgccacatc cgggagcgca ggccgaagag
     1021 gctgcctcag aagatcaagg cctgcacatc ataacttctc cgatcgtcgg gactttctat
     1081 cgctcgccct cgcccacggc cgaaagcttc gtgcgcatcg gcagcaacgt cgaacccgag
     1141 tccgtagtct gcatcattga agcgatgaag ctgatgaatg aaattcaggc tgaggcctct
     1201 ggcgaagtcg cgaaaatcta cgtcgagaac ggccaggctg ttgagtacgg tcagccgctt
     1261 ttcggaatca agcagggata gtccaaagtc ccacgtccaa aagtccaagg tcgaggaatt
     1321 caagcggacg ttggacactg gacgttggac tttttgactt tgtatgaaca acggactacg
     1381 ccgctttcgc aagatcctcg tcgctaatcg cggcgagatt gcctgccgca tcatctggac
     1441 gtgtaaagag atgggcattg gcaccgttgc cgtgcacagc gacgttgatc gcgattcgct
     1501 gcacgtgcgg ttcgctgacg aatccgtctg tattggccct gcgccatctg cccagagcta
     1561 cctgaacatt ccggcgatca tcagcgcggc tgagctcttc aacgttgacg cgattcatcc
     1621 cggttacgga tttctcgcag aatcggccta ctttgcagag atttgcgaag cctgcaacat
     1681 caaattcatt ggccccaagc caaacatcat tcagttgatg ggcgaaaagg tcgaagcgcg
     1741 tcgggcgatg aaaaacgccg gcgtgccgat tctgccgggc agccccgacg cgttgacgtc
     1801 cgaggaggat gcgatcaagg tcgcgcgcga gattggctat ccggtgattg tgaaagcctc
     1861 gggcggcggc ggcggccgcg ggatgcgtat cgtcaacgcc gaagatgagc ttggccatgc
     1921 cctcgagacg gcttcgaccg aagcagccgc ggctttcaag aatgccgacg tttacattga
     1981 gcgctacatg caacggccgc ggcacatcga gatacaggtg ctcgcggacg aacacggcaa
     2041 ttgtgttttt cttggcgaac gcgaatgctc gattcagcgc cgtcatcaga aacttcttga
     2101 agaagcgccg gccccgatga tgacgcctga gttgcgtcaa cagatgggtg acacggccgt
     2161 ggcggcgtgt aaagcaatcg gttactcaag cgcgggaacc tttgagtttc tgctcgacga
     2221 aaacaatcag ttctatttca tggaaatgaa tacgcgcatc caggtcgagc atcccgtgac
     2281 cgagatggta acgctgaccg acattgtgcg taatcagatt cgcattgccg aaggcgagcc
     2341 gcttggtttt acgcaggacg acgtgatcat ggtggggcac gcgatcgaat gccggatcaa
     2401 cgccgagaat ccagaaacgt tcgtgccttc acccggaaag attactactt tcaatctgcc
     2461 cggggggccg ggcgtgcgcg ttgatactta cgtctatccg gaatatcgcg tgccgccgtt
     2521 ctacgattcg ctgattgcca aggtgatcgt gcacgcgcgc acccgcgagt tggcgattgc
     2581 gcgcatgcgc cgggcgctgg aagcaatggt gatcgagggc ataaaaacga cgattccgtt
     2641 gcatttgaag attatgaatg acgcgaattt ccaggccggc aacatctcga cgcggtttct
     2701 tgacgacttt ctgacgacca atgggaatcg cagtgcgcca acagcctctg cggctttgac
     2761 tggggctgcg gcgtgacttt ataataatcg acttttcagt tgcgtgttgc gctgtctgag
     2821 agggtgagga agcaatatgt cgttcgcaat tattagaacc ggcggtaagc agttcaccgt
     2881 ggaaaaaggc gggaccctgc gggtgccgtc gcttggtacc gaagtcgggt cgtcggtgga
     2941 ccttgaggtt ttggccgtcg gcgaaggttc cgaaacgcgc gtgggctcga cgctcggtga
     3001 aggcgcggtg gcgaaagcga ccgtggtcga acatggccgg ggggcgaaga tcatagtctt
     3061 caagaagaaa cgacgtaagc actacaagcg gacgaagggt catcgccagg ggtttacgac
     3121 acttaagata gattcgattg gctaattatt gattggttca ttgattcaat ggatcaatga
     3181 attaatgaat cacttttctg aggttttgtt atggctcata agaaaggcgt aggttcatct
     3241 cgaaacgggc gcgactcaaa ctcgcagcgg ctgggcttga aaaagttcgg cggcgagcgc
     3301 gtgctgggcg gcaacattct cgcgcgtcag cgcggcacga agtggaaacc cggtcagaac
     3361 gtcggccgtg gcaaagacga cacattgttt tcattgattg acggcttcgt gaagtttgaa
     3421 gacaaagggc gctcgggcaa attcatcagc gtgtatcccg ctcaggcaac ggcaagttaa
     3481 gaattgttga gacgattcat tcgaatgcga cgctcgccga ccttcaggta cgcgggctcg
     3541 cattttctat ttggaatctg gaatctggga tttgagattg gaattgccca cccgctaccg
     3601 caggtggtcc tgacagatgt tcatcgatag agcaaagatt cgggtacagg cgggcaccgg
     3661 cggcagcggc gtgacggctt tccgccgtga aaagttcgtg ccccgcggtg gtccgtcagg
     3721 tggcgatggc ggccgcggcg gcgacgtgtg gctggtcgca gaggcctcgc tcaacacctt
     3781 gctgcatttg aggtacaacc cgctgcacgt cgccggacgg ggcatgcacg gcgaaggcag
     3841 taatcgctca ggcaaagagg gcggcgatgc aatcgttcgc gttccggtcg gcactcagat
     3901 ctttgatccg caaacgaacg atttgttgtg cgacctgcag gaagatggcg cgcgttggct
     3961 ggcggcgcgg ggcggacgcg gcggattcgg caacgcgcac tttgcgactt cgactaatcg
     4021 cgcgccgcga tatcaccagg aaggcagccc gggcgaagaa ttcgagtttc agcttgagct
     4081 gaaattgctc gctgatgttg gcctggtggg gttcccgaac gcggggaaat ccacattcat
     4141 ttcggtggtt tcggcggcgc atccaaagat tgccgactat ccgttcacga ctttggagcc
     4201 gcatctcggc gtggttgatt tgggtgactt tcgcacgttc gtcatcgccg acattcccgg
     4261 attgatcgaa ggcgcgcacg aaggccacgg tctcggcgat cgttttctgc ggcatgtcga
     4321 acgaacaaag ttgctgctgc acctggttga tgtttcgtca acgtcaggtc gcgattcggt
     4381 cagcgactac gaagtgatca atcgtgaatt ggcagcttac gatgagcagc ttggcgaacg
     4441 tgcgcagttc gtcgttgcga ctaaaatcga cgcgctcgac gatccgtcgc ggctcgagag
     4501 attacgtgaa cgcgcggagc aggacggacg gccgtttttt gccatttctg cggttgcggg
     4561 aactggcgtg cgcgagttgc tgacggcaat cgcgcgcgag attgaggaaa tgcgcgcgaa
     4621 cgtgaacacc gagcggtcgt atcacggaga ggaatcgctc ctggttggca gcagtgcgac
     4681 tcggttttga gggcggttct gaattagtac ggcgggcgca ggcttttgca tcagtgatgg
     4741 gagcgaaacg cgcagcgatt tacggcggca cgtttgatcc gttgcacaac ggccacctga
     4801 gagtggcgcg ccgcgtgcag aagttattcg ggctcgacga attatttttc gtcccggcgt
     4861 gcgtgcctcc gcacaaacgt ggagcaggta tcacttccgc gtttcacagg tttgcgatgt
     4921 tggtgcttgc gacgcaggtg gatgagccgc tgcgagtttc gacggtcgag ctggataatc
     4981 ccgagcggcc gtacgctgtc gaaaccgtcg cgcggatgca ggaacaactc ggcactgatt
     5041 accgtttgtt ctttgtcatg ggcgccgatt cgtggtcaga gattacgacc tggcgcgaat
     5101 ggcagcgatt gctgacgatg tgcgatcaca ttgtcgtcac ccgaccaggc tacgaactga
     5161 acacggcggc gacaggagct aatgtgatcg atcttcgggg aaagaccgac gatgagatca
     5221 acgtcctggt cagtcagtca gcgtcgcctc gagtgtttgt gacggacgcg gtgtttgagg
     5281 acgtttcggc taccgcgatt cgtgccgcca cgagacaggg agacacgaac gcattgacga
     5341 aaatggtgcc gcacgaagtg gcgacctaca ttgaaaagta cgggctttac aggaattaga
     5401 tgagtcaaaa tttgaaagaa aaggtcttga gctctgaagc gcaggctgcg agtaccggcc
     5461 ggcgcgccag tgcgtctgag ccggcgaatc cggctgactt cgacgagcgg attcgttggg
     5521 cactgcacgc ggccgcggaa aagaaagcgc ttgatttgac cgtgctggat ctgcgcggcg
     5581 tcgcgacgtt cacggattat ttcatcatct cgaccggcgc taacaagcgg cagatgcagg
     5641 cgatcgccga tgaaattgta gatcagttga agcggcgcgg ctcacgggcg gcgcgcgtcg
     5701 aaggctatca gggcgctgag tggattctgg tggattacgg cgactttatc gtgcatgtgt
     5761 tcgatgagaa gtcgcgacgc ttttatgacc ttgagtatct ctggcgtgaa gcgaagcgcc
     5821 tgaatgtatc gccggagttg cttgaatctg tgatctcaaa tctgaaatct gagatctcaa
     5881 actctgcgat accaggttct ttgaaagagg aatagtgctc gaactggtgg cgttgtcgga
     5941 agcgatgcgc gaagcggcgg cgatggccga acgcgtcgct gccactgacg ccaacgttct
     6001 ggttaccggc gagtcaggcg caggcaaaga cgcgttggct acgttcattc acgcgcagtc
     6061 gcggcgcgcg cacaaagctt tcgtaaagat tgattgcgcg accttacctt cggacctgct
     6121 cgaggccgaa ttattcggct acgaacgcgg cgcttttacc ggcgccagcg aagcgaagcc
     6181 ggggcgtttg gaagcggcgc atcgcgggac gctggtgctg gatgagattg cgcacctgcc
     6241 gctcgacgcg caggccaagc ttctgcgagt gatcgagcag cgcgagtttg aacgcctggg
     6301 tggtcgcaaa acgatctcag tcgatgcgcg gcttatcgcg ctgacgaacg ctgatttaaa
     6361 aaatgccgtc gagcggcgcg cgtttcgcga tgacctgttt taccggctga acgtcgtaca
     6421 cattctggtg ccgccgttgc gcgaccggca gaaggatttg gagccattgg cgcgactatt
     6481 cgcggccacg tacgcgcaga agcacggcac gcgtgcgaaa aagatttcgc cggaagcgct
     6541 ctcgtatttg aaaagttacg attttcccgg caacgttcgc gagctcgcga acatcattga
     6601 gcgcgcggtg attgtcgctg acggttcgag cattgagcct gggcatttgc cggacggctt
     6661 gcgcgccgcc gccgagcgcc gcgcgcgcga aaatcgcccg ctgacgctgg cggagattga
     6721 agcgaattac atccgcgagg ttctggcagc ctcgaaggga aacaaaactg aggcggcgcg
     6781 catcctcggc atcagtcgga agaacttgta cgagcggctg gcccgggaaa gcaaggatga
     6841 aggatgaagg cggaaggatg aaacgttatt ccggagcccg gcggaagaaa agttcaactc
     6901 gaggagttcg cggcaggagc acgaagagtt ttcatccttc atccttccgc cttcatcctt
     6961 gcatatgaag cttcgcttca tctggcccgg gaagactaag gatgagcggc tgcggtcgct
     7021 gattgatgat tacttaaaac ggctctcgcg atttgtgcgc tgtgaaatcg tcgaggtcaa
     7081 agaaagccga acccgagacg cgggggcagt aaccaaagaa tcgcaaagga taatcgatgc
     7141 gatcggagat tcaagcctcg ccgtcttgct ggatctgaat ggcagtgatt ggagttcgca
     7201 ggagttggcc aggcaggtgc agcgctggga gaacgacggg acgaaggcag tagcgattgt
     7261 gattggaggt cccgaaggag tttcgacgga ggtgcaatca cgagcgcacg cgcgttggcg
     7321 cttgtcgcgt ctgactttga cgcatgaaat ggcgcgcgtg ctcgcctgcg aacagcttta
     7381 tcgcgccttt gcgattaatc gcggattgcc ttatcagaaa taatttcatt tg
//
LOCUS       DATDBY010000222         2166 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1219561, whole genome shotgun sequence.
ACCESSION   DATDBY010000222 DATDBY010000000
VERSION     DATDBY010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1219561"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..311)
                     /locus_tag="VIT19_04155"
     CDS             complement(<1..311)
                     /locus_tag="VIT19_04155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5838206.1"
                     /translation="MNTVIAIVDDLFFASKIRGTAEQIGTRVQFSRSIPDAIAKAREE
                     APALIIADLNASCCDVLELARALKSDDALTGVPLLGFFSHIQTELQKAAIEAGYDRVM
                     PR"
     gene            657..1583
                     /locus_tag="VIT19_04160"
     CDS             657..1583
                     /locus_tag="VIT19_04160"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEY5838207.1"
                     /translation="MSFTPPDANTRIEIGNEHVSQADLREKSTLVLASYNIRYAVGRF
                     LILSGLLRKLGYNFPRRRADAIERNLTTAADAFTNAGLLAAPDILALQEADKMTARTG
                     RQHIARRLADQMKMSYVHAGVGLPRGIQPKQREWWLNFEEQIANDDEGDMGVALLSRV
                     PLTDVELIDLPWHECPWHPRVGVAATIHWRDEKVRLFNAHIDPHGPLDNQHQQTEAVL
                     ERAKGHSGPTVVLGDFNTLSKEKAIQIRKLMESHGYTTPFPTDIPTWRGAGVVRFHAD
                     WIFGKGVTFKRWGVAKPLNVSDHWPIWAEIEL"
     gene            1695..>2166
                     /locus_tag="VIT19_04165"
     CDS             1695..>2166
                     /locus_tag="VIT19_04165"
                     /inference="COORDINATES: protein motif:HMM:NF019644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase substrate-binding
                     domain-containing protein"
                     /protein_id="HEY5838208.1"
                     /translation="MKPTHITSRDNSLLRRARAVRDGKLNSLIFVEGLRLCEEALKSE
                     LRIEAVIYTDHILRKDRAAKSIEGLAAATETSAMVSEKLLESVSFTKTPQGIVVLAVR
                     PTNDEEAFAAKQTKSPLLVVLHEINNPVNVGAIVRTAEAAGATGIIATANTADPF"
BASE COUNT          485 a          624 c          592 g          465 t
ORIGIN      
        1 cgcggcatca ctcgatcgta acccgcctcg attgccgctt tttgcaactc tgtttggatg
       61 tgggaaaaga atccgagcag cggaactccc gtcagcgcat cgtcactttt caaagcgcgc
      121 gccaactcca gaacgtcaca acaactcgca ttcaggtcgg caatgattaa cgccggcgct
      181 tcttctcggg ctttcgcaat cgcgtcgggg attgatctcg aaaactgtac gcgcgtgccg
      241 atctgttcgg ccgtgccgcg aatcttcgaa gcgaaaaaga gatcatcaac gatggcaatg
      301 actgtgttca tgtctcgttg ctaaattcag ctttactctg tgtctctcgg ttgctttgtc
      361 ctaaaggcat ctctgcaagc caattgtctc attcacaccg tcgctttagc gcggtgatcg
      421 ccccgccggc aacccatcgg gaaaccgttt aaacggtttc tgctgactac ccttcgcata
      481 aacaccgggc taaagccgcg gtgtgaatgc gactggtcat tgtttagcag attgttcact
      541 gggtattctc accaccgagg cacagagcac gcacagagac acagagaaga acggcaacgc
      601 atgtaagtac cacagccctt gcttacgcgc gggcttctga cagatcatgc gccgcaatgt
      661 ctttcacgcc tccggacgcg aacacacgaa tcgaaattgg aaacgaacac gtttcgcaag
      721 ccgacttgcg tgaaaagtcc acgctggtgc tcgcttcgta caacatcaga tatgcggtcg
      781 ggcgttttct gattctgtct ggcctgctgc ggaaactcgg ctataacttt ccgcgtcgtc
      841 gcgcagacgc gatcgagcgt aacctcacta ccgcggccga tgcttttacc aacgccggtt
      901 tgctggccgc gcccgacatt ctagcactgc aggaagccga caagatgacc gcccgcacgg
      961 ggcgtcaaca catcgcgcga cgtctcgcgg accaaatgaa gatgtcttac gtgcatgccg
     1021 gcgtcggatt gccccgtgga atacagccga agcaacgcga atggtggctg aacttcgaag
     1081 agcaaatcgc gaacgatgac gaaggcgaca tgggcgttgc gttgttgagc cgcgtgccgc
     1141 ttaccgatgt cgagcttatc gatttgccgt ggcacgaatg cccctggcat ccgcgagtcg
     1201 gcgtcgccgc gaccattcat tggcgcgatg agaaagttcg tttgttcaat gcgcacatcg
     1261 atccgcacgg gccgctcgat aatcaacatc agcagacaga ggccgttttg gaacgagcga
     1321 aggggcattc cgggccgacg gtggtgctcg gcgacttcaa cacgctgtca aaggaaaagg
     1381 cgatccagat tcgcaaactg atggagtcgc acggctacac gacaccgttt cccacagaca
     1441 taccgacctg gcgcggcgcc ggggtcgtgc gctttcatgc cgattggatt ttcggcaaag
     1501 gggtcacgtt caaacgctgg ggggttgcga agcctttgaa cgtttccgat cattggccga
     1561 tttgggcgga gatagagctt tagtttcaag ttccaggatt caagtttcaa gtttgctttt
     1621 cccgtcttga gccggtcctc tctatgcagc gtacaatgct acggcaaacg aacttgaaac
     1681 ctggaacctg aaacttgaaa ccgactcaca tcaccagccg cgacaattcc ctgctccgcc
     1741 gcgcgcgtgc tgtgcgcgat ggcaagctca acagtttgat tttcgtcgaa ggactgcggc
     1801 tgtgtgaaga agcgctcaag tccgaattgc gaatcgaagc cgttatctac acagaccata
     1861 tcttgcgcaa agatcgcgcg gcgaaatcga tagaagggtt ggccgcggcc actgagactt
     1921 cggccatggt cagcgagaaa ctgcttgaat cagtgtcttt cacgaaaacg ccgcaaggca
     1981 ttgtcgtcct cgctgtgcgc cccacgaacg acgaagaggc ttttgccgcg aagcaaacga
     2041 agtcgccgct cctcgttgtc cttcacgaga tcaacaatcc ggtgaacgtc ggcgcgatcg
     2101 tacgcacggc ggaagcggcg ggcgctaccg ggatcatcgc gaccgcgaac accgccgatc
     2161 cgtttt
//
LOCUS       DATDBY010000223         8381 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1464753, whole genome shotgun sequence.
ACCESSION   DATDBY010000223 DATDBY010000000
VERSION     DATDBY010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8381
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1464753"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..894
                     /locus_tag="VIT19_04170"
     CDS             <1..894
                     /locus_tag="VIT19_04170"
                     /inference="COORDINATES: protein motif:HMM:NF005875.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HEY5838209.1"
                     /translation="MEFKKVGVLGCGLMGAGIAQTAAMAGYETIVREVSDDFLAKGFA
                     GIEKSLSKFAEKGTITADQQKEIRDRLKGTTSFEDLADCDIIIEAIIENLETKRETYL
                     RLDELCKPETIFASNTSSLSITQMMTVTSAERQQRFIGMHFFNPVPLMKLVEVIRTIL
                     TDPAVYEDAVAFSATLGKVPVRTDDRTGFIVNRLLVPYLLDAIRALEEGVASTVDIDN
                     AMKLGCGYPMGPLTLGDFVGLDTTYYISEIMFNEFREKRFAAPPLLKRMVMAGLYGRK
                     SGRGFYDYTKDPKNPTPMNLV"
     gene            complement(1008..2303)
                     /locus_tag="VIT19_04175"
     CDS             complement(1008..2303)
                     /locus_tag="VIT19_04175"
                     /inference="COORDINATES: protein motif:HMM:NF015238.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004531 - deoxyribonuclease II activity
                     [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease II family protein"
                     /protein_id="HEY5838210.1"
                     /translation="MRANKILRAFVTALTVSFFLVVFPGYAPIAEPTPQQSAPVPLLA
                     KGQPVDWWFVFTLNSAGFPECGTGAARKGCPFGGTVQNYKDGQQWVSASSAAPTLKQG
                     SGCAGTTGADPLGATFEQVYNGSFNYLIWNDQFYNDPKIKGCTTSCGAPWGHSKGLVA
                     WNDAGEGFVMQVSTPSWPAAGSRTHPRKTDGNTLGCVDDDDVMVSQHFFALKLNKDDL
                     VNVLKALQNASVVTDPTNPQIVNNGGPSDVQALVNAFGTRSSNTTFITTTLSSGVQLI
                     SKPSNLNVPPWQMVSAILGGVDLRAATWWATPPIPTTTASTTIKCWDKSLAKPGAVQI
                     ATTGTWNGQTIGLTGGASPDHNHAKIGVSLPGGDKSYAIFGDMNQQGSLSGPNCKSSQ
                     NGRGGLFYVVENKDLSDSVSALINGKTAPTTLPKKKPAR"
     gene            complement(2647..5433)
                     /locus_tag="VIT19_04180"
     CDS             complement(2647..5433)
                     /locus_tag="VIT19_04180"
                     /inference="COORDINATES: protein motif:HMM:NF020700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838211.1"
                     /translation="MTRNRKSTIGNFSNQNARVRSRARRAGQVIALAFSLYALFLGWG
                     IPSPAATQLPRGLFLAYGPADFVRGAGAPTSDTRTFSVLNSPTEYRLQIFNGGMNSQF
                     GRASSAVVTVNGQKIVSPSDFNQNAGLIERQFTSTATNSLTVELRSAPKSGLTVQVVG
                     VDNDAPVINVVSPVNGTVVSEQMLTVTGTIDDPISGVASVTCGGTPATVSGSSFSCDQ
                     TLIEGANEIIVEATDRAGNNASTVINVTWNPVVPEEEQGDIPSARLTPDVIFVGETQQ
                     VNVSARIPYGVAAGAPQVTLQRIDAAGSLLGIEGVLVDNGDASQGDLLSGDGVFSFRR
                     PYAAANVEQLRFRVSYQQNGSELKSKTLRLGFYDRLTNAQIDAILLTQQSAAQSYVDL
                     SASVGEEQARATVLAQLRQNPSVITAGLSTDNNTIAVLYTPGIAGAIYLHQPGTRGGG
                     SGGPAASNQSIVAPLRSRSLAMPSAATLETSDDEDEETHIESRRALILSPFHFQFAPD
                     DENGEIAQLLEGMSCPSYEVTSLADQQTSVDSFKNLDQYGIIAIISHGITLWQGIFPP
                     AGGFHGLPLGLEVYGLVTSEKATPATVTQRQFDLVSGRVALVTWDPTTTYFAVLPTFI
                     SYYSPGEFPNSLVYLGTCFSAANDTMARAFTGQGADTYLGYTKEVSTGWARLVSLDFF
                     ERFLGDPLTTTGGADGAYTPEQYDIYPCLKRDGTIRSACNTPERMERVRRLEGAKFKM
                     IGSEELLQPNLLLNGGFETGDLDGWGFARDSRVLSQLGDIRPVSGNYMGMVAKIDTWF
                     GLLVQEFCLPAEATRIEFDWNLITEQTCGSFNFNPDELWIRFQRPGLYHNLLKTGVRE
                     QCSKLGPTTVDFPSPGGARATGWQHASIDIADVAQSINSENVELRFEVLRAIFNGNLT
                     TDSAILIDNVKIVR"
     gene            complement(5718..6986)
                     /locus_tag="VIT19_04185"
     CDS             complement(5718..6986)
                     /locus_tag="VIT19_04185"
                     /inference="COORDINATES: protein motif:HMM:NF033206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ScyD/ScyE family protein"
                     /protein_id="HEY5838212.1"
                     /translation="MRYRRFVALFAVVALACSVAGTRSHAEPMYIVAGQNLGVPAQCS
                     ALPVLAAALRAPTKLIFTQHSNLLVSEAGTGANNGRISIVDPVSGARRTLLDGLPAGF
                     AEAGRGSSGPSGLAIRGRTLYITIGGGDSTLPGSANNTRIANPTPSSPIFSSVLAVEF
                     TPHVEQTTEGFTLTLADQLALQNGSEVNLNNGGDDKIKVRLVADFPDYTPEPRHDEPN
                     HVRLSDPLGLVIAANQLFIVDSDSNAIRIVEIQTGEATTLTQFGAVSSGRFAAEAIPA
                     SIRFFGDQLLVSLMTSNPFPTGAAQVRMLDPATGSNEPFISNLTAAIDVLPIRGRGRA
                     SEFLTLELSADMQAGAPGRMRRFSSPDATPVVVANCLNSPTSMARDERTGDLYITEIF
                     TGRIVKVDPSSISGGNTAFGFEPQPINAVP"
     gene            complement(7085..7588)
                     /locus_tag="VIT19_04190"
     CDS             complement(7085..7588)
                     /locus_tag="VIT19_04190"
                     /inference="COORDINATES: protein motif:HMM:TIGR02246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HEY5838213.1"
                     /translation="MKRARTSTKLLFTLASFSLCMFTVSDQKARASNAHSADDAAMRE
                     NVKQMEIGWNAKQGALYAKPFTHDADYVVINGMYLQGRTTIEKAHQRIFDTFYKNTTI
                     SLVVRQIRFLRPDVALVHVSGHLDAPENEKQFVADASITLVMTRDKQSWKIAAFQNTQ
                     VTTNQQR"
     gene            complement(8157..>8381)
                     /locus_tag="VIT19_04195"
     CDS             complement(8157..>8381)
                     /locus_tag="VIT19_04195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838214.1"
                     /translation="HHLRADGEEVRAVMPLETALTGQFKVRLVDERGGLQSVAGPLLI
                     HLALSDAAQFGMHQRNQFIERGRIAFAPIS"
BASE COUNT         1741 a         2303 c         2445 g         1892 t
ORIGIN      
        1 atggagttta agaaagttgg agtattgggt tgtggattga tgggggccgg cattgcgcag
       61 actgcggcga tggccggcta cgaaacgatc gttcgtgaag tgtcggacga ttttctcgcg
      121 aaggggttcg ccggcatcga gaagtctttg tcgaagtttg ccgagaaagg caccatcacc
      181 gccgatcagc aaaaagagat tcgcgatcgt ttgaaaggta cgacgtcgtt cgaggacctg
      241 gcggactgcg acattatcat cgaggcgatt attgaaaacc tggagaccaa gcgcgaaacg
      301 tatctgcgcc tcgacgagct gtgcaaaccc gaaacgatct ttgcttcgaa cacttcctca
      361 ctttcgatca cgcagatgat gaccgtgact tccgctgagc ggcagcagcg cttcatcggc
      421 atgcactttt tcaatcccgt gccgctcatg aagttggtcg aagtcattcg cacaatcctg
      481 actgacccgg ccgtttacga agacgccgta gcgttctcag ccaccctcgg caaagtgccg
      541 gtgcgcaccg acgatcgcac gggattcatc gtgaatcgtt tgctggtgcc ttacttgctt
      601 gatgcgattc gcgcgctgga agaaggcgtg gcttcgactg tggatatcga taacgcgatg
      661 aagctcggct gcggctatcc gatggggcct ttgacgctgg gagatttcgt tgggctcgac
      721 acgacttact acatctcgga aatcatgttc aatgaatttc gcgaaaaacg tttcgccgcg
      781 ccgccgctct tgaaacgaat ggtaatggcg ggcctgtacg gtcgaaaatc gggccgggga
      841 ttttacgact acacgaaaga tccaaagaac ccgacgccga tgaatctggt ttagaaggag
      901 cttggccgga gcgcacgcat cctgcgtgcg ggccaccggc atccctgccg gtatgaaaag
      961 cgagcaagga tgctcgcgac ccgccgccag gatgtcggcg ctccacatca gcgcgctggt
     1021 ttcttcttcg gcaacgtggt tggggccgtc tttccgttta tcaacgcaga gacgctgtcg
     1081 ctcaggtcct tgttctcaac cacatagaac aaaccaccgc gcccattttg actactcttg
     1141 cagttaggcc cggataggga accttgttgg ttcatatccc cgaagatcgc gtagctcttg
     1201 tcaccacccg gcagggacac accgatcttg gcgtggttgt ggtccgggct ggctcctccg
     1261 gtcaagccaa ttgtctgacc gttccaggtg ccggtcgtgg cgatctggac ggccccgggt
     1321 ttagccagcg acttgtccca gcatttgatc gtggttgacg ccgtggtggt gggaatcggc
     1381 ggtgtcgccc accaggtcgc cgcgcgcagg tcaacgccgc ctaagattgc cgagaccatt
     1441 tgccagggcg gtacattcag gttggacggc ttcgagatca attggacgcc actggagagt
     1501 gtggtggtga tgaaggtggt gttgctggat ctggttccga acgcgttcac cagtgcctgt
     1561 acgtccgatg gcccaccgtt gttaacaatt tgagggttcg tcggatcagt gacgacactc
     1621 gcattctgta gggccttgag gacgttgacc aggtcgtcct tatttagttt gagcgcgaaa
     1681 aagtgttgac tgaccatgac gtcgtcgtca tcgacacagc ccaacgtgtt cccgtcggtc
     1741 ttgcgcggat gagttctgct tcccgcggcc ggccaggacg gcgtggacac ctgcataaca
     1801 aatccctcgc ctgcgtcatt ccaggcgacc agcccctttg agtggcccca gggcgcgccg
     1861 catgaagtgg tgcatccttt aatcttagga tcgttgtaaa actgatcatt ccaaatcaga
     1921 taattaaacg acccgttata gacttgctca aaggtggcgc cgagtggatc agcgcctgta
     1981 gtgccggcac atccgcttcc ttgtttgaga gtgggtgccg cgctgctggc ggacacccac
     2041 tgctggccgt ctttgtaatt ttgtacggtg ccgccaaatg ggcagccctt cctcgccgcg
     2101 ccggtcccgc attcggggaa gccggcggaa ttgagcgtga atacgaacca ccaatcgact
     2161 ggttgaccct tagccaacag cggcaccggc gcgctttgct gcggcgttgg ttcggcaatg
     2221 ggtgcgtacc caggaaaaac gacaaggaaa aagctgacgg tcagagcagt aacaaacgct
     2281 ctgagaattt tgttggctct catagtcggc ggctcctgaa gcgtgagatg gacgaggggc
     2341 ttatatcatc cagtgacagc ttccgcaata atttttacag cgaggcttta atcatgcgtt
     2401 cgctcggcac tttagcggta cctgaagaaa ttcaaatcgg ccgcagacta acgcagatgg
     2461 acgcggatcg aacgatggat acggaaaatc attctcgaac ccttcaacta gccagtcggt
     2521 tctgaattgg cgtgtccgct tacttctgaa agcgacggtg gggcagaaag tggccactac
     2581 aaacctccgg cgactcatca acgcaaaagc ttgagcagag atgagccgcc gagtaggtgc
     2641 cgttcgctat ctgacgatct tgacgttgtc gatcagaatc gctgagtcag ttgtgagatt
     2701 gccgttgaag atcgcccgga gtacctcgaa cctgagttcg acgttttcgc tgtttatcga
     2761 ctgggcgacg tcggctatgt ctattgaggc gtgctgccag ccggtggccc tcgcaccgcc
     2821 gggtgacgga aagtcgacag tcgtcggccc gagcttactg cactgttccc taacgccggt
     2881 cttcagcaaa ttgtgataca gccctggtct ctgaaagcga atccataatt cgtccgggtt
     2941 gaagttaaaa ctgccacagg tctgttcggt gatcaggttc cagtcgaatt cgatgcgtgt
     3001 ggcctctgcc ggcagacaga attcctgcac cagcaaaccg aaccaggtat caatcttggc
     3061 gaccatcccc atgtagtttc cactgacggg acgaatatct cccagttggc taaggactcg
     3121 tgagtcacga gcgaaccccc acccgtccag gtcgccggtt tcgaaaccac cgttgagtaa
     3181 caggttgggt tgcaggagtt cttcggaacc aatcatcttg aacttcgctc cctccagacg
     3241 tcgcacacgc tccattcttt ccggcgtatt acaagcgctg cgaatagttc catctctttt
     3301 caggcacggg tagatgtcat actgttccgg ggtgtaagct ccgtccgccc cacccgtcgt
     3361 cgtcaaggga tcgccgagga acctttcgaa aaagtccagg ctcaccaatc tggcccaccc
     3421 cgtcgaaacc tccttggtat agcccaggta tgtgtccgca ccctgcccgg taaatgctct
     3481 cgccatcgtg tcgttcgcgg ctgaaaagca tgtgcccaga tagaccagac tgttcgggaa
     3541 ttcgcccggt gagtagtagg aaataaatgt tgggagaacg gcgaagtaag ttgtcgttgg
     3601 gtcccaggtc accaatgcaa cccgcccgga aacgagatcg aactgacgtt gagtaacggt
     3661 cgccggcgtt gctttttccg aggtaaccag cccgtaaact tcgagaccca gcggcagtcc
     3721 atggaatccc cctgccggcg gaaaaattcc ctgccagagc gtgatgccgt ggctgatgat
     3781 ggcaatgatc ccgtattggt caaggttctt gaaactgtca acagaggtct gctgatctgc
     3841 gaggcttgtc acctcatagc ttggacacga catcccttca agcagttgcg caatttcgcc
     3901 gttctcatcg tccggggcga actggaaatg gaagggcgac aggatgagtg cacgacggct
     3961 ttcgatatgg gtctcttcat cttcgtcgtc gctggtctcc agcgttgcgg cgctgggcat
     4021 agccaacgaa cggctgcgga gcggcgcaac aatagactga tttgatgcgg cggggccacc
     4081 gcttccacct cctcgggtgc ctggctgatg caggtaaatt gcgccggcga tgcccggggt
     4141 atagagaacg gctatcgtgt tgttatccgt cgagagaccc gccgtaatga ctgaggggtt
     4201 ttgacgaagt tgggccagta ccgtggctcg tgcttgttcc tcgccaaccg aagccgagag
     4261 gtctacataa ctttgcgccg cgctttgctg cgtcaaaaga atggcgtcga tctgcgcgtt
     4321 agtcaggcga tcgtagaaac ccagtcgcag ggtctttgac ttcagctcac tcccattctg
     4381 ttgataactg acgcggaagc gcagttgctc cacattcgca gcggcatatg gacggcggaa
     4441 actgaagacc ccatcgccgc tgagaaggtc gccctgcgac gcgtcgccgt tatcaaccag
     4501 cacaccctcg atcccgagga ggctgcccgc agcgtcgatt ctttgaagtg tcacctgcgg
     4561 tgcgccggca gctacaccgt aaggaatccg cgcactgaca ttgacctgct gggtctcgcc
     4621 cacaaagatg acgtccggcg tgagtcgcgc cgatggaatg tctccctgtt cctcttcagg
     4681 caccacggga ttccaggtca cgttgattac ggtcgaagca ttgttaccgg ccctgtccgt
     4741 cgcttcgacg atgatctcgt tcgcaccttc gataagcgtt tggtcgcacg agaagctcga
     4801 gcccgagact gttgccggcg ttccgccgca agtgacactg gctacacccg agattgggtc
     4861 gtcgatcgtg cctgtcacag tcagcatctg ctcgctgact actgtcccgt ttactggaga
     4921 gacgacattg atgaccggcg catcattgtc caccccgacg acctgaacag tgaggcccga
     4981 ctttggcgcg ctgcgcagtt cgaccgtcaa agagttcgtg gcggtggagg tgaactgacg
     5041 ttcaataagt ccggcgttct gattaaagtc tgagggagag acaattttct gcccgttgac
     5101 tgttacgacc gcgcttgaag cgcgaccaaa ctgcgagttc attccgccgt taaaaatttg
     5161 cagccggtac tctgtcggcg agttgagcac ggagaaggtc cgcgtatcgg aagtgggcgc
     5221 gcctgcgccg cgcacgaaat ccgcgggccc ataggccaga aagagtccgc gcggcagttg
     5281 ggttgcggcc ggactcggaa tgccccaacc cagaaacagc gcgtagagag aaaacgcgag
     5341 cgcgataacc tgaccggctc ttctggccct acttcggacc cgcgcgtttt ggttcgaaaa
     5401 attaccgata gtggattttc tatttctcgt catcttttct ccttactcct tcgagcgttt
     5461 acctgaatct ttaaggttct gcggcgaggt agcgtctttt tctcgccggc cgggaaccgg
     5521 cttgcagtgt cgttcactgt tgtaagcgac gaatgcgacg gaaagtggcc acttgcggat
     5581 tttcgttgtt tgctccggcg tgacacgaga acgttgaatt cggagcgcac cagggtccgt
     5641 caatccgttc gtatagtcgc catgggccgc aatgccttgc gctgccggcg tcaaccgcgg
     5701 actgccgaaa gccttatcta cgggactgca ttaatgggtt gtggctcaaa accaaaagcg
     5761 gtatttccac ctgatattga agatgggtct actttgacga ttcgaccggt gaaaatttca
     5821 gtgatgtaca gatcgccagt tcgttcatcg cgcgccatgc tggtgggact gttcaagcaa
     5881 ttggcaacga caacgggcgt agcgtcgggc gagctaaatc ggcgcattcg tccgggcgcg
     5941 cctgcctgca tatcggcgct tagttcgagc gtcaggaatt cacttgcacg tccgcgtccc
     6001 ctgattggaa gaacgtcaat cgcggcagtc agattggata tgaacggttc gttgctgccg
     6061 gtcgccggat caagcattcg cacctgggcg gcgccggtcg ggaaaggatt actggtcata
     6121 agtgacacca gcagttggtc gccgaagaat cggatactgg cggggatggc ctctgctgcg
     6181 aaacggccgg acgagaccgc gccaaactgc gtcagcgtgg tcgcctcgcc ggtttggatc
     6241 tcgacgatgc ggatggcgtt gctgtctgag tccacgatga agagctgatt agcggcgatt
     6301 accagaccca ggggatcgga gaggcggaca tggttcggtt catcgtgacg cggttcgggc
     6361 gtgtagtcag gaaagtctgc aaccaggcgc actttgatct tgtcgtcgcc gccgttattc
     6421 agattcactt ccgaaccatt ctgtaatgcg agctgatcgg ccaaagtgag cgtgaagcct
     6481 tcggtcgtct gctcgacgtg cggagtgaac tcaacagcca gtacggagct gaagatgggc
     6541 gatgaaggtg tcgggttagc gatgcgcgtg ttgttggcgg aaccaggcaa tgtcgaatcg
     6601 cccccaccga tggtgatgta gagagtgcgg ccgcgtatcg ccagaccgga cggccccgag
     6661 gagcctcggc ctgcttcggc gaagcctgcg ggcaaaccgt caaggagcgt gcgtcgggcg
     6721 ccgctgacgg gatcgacaat agaaatgcga ccgttattgg cgccagtgcc ggcttcagag
     6781 accagtaagt tggaatgctg cgtgaagatg agtttcgtgg gcgcacgcag agcggcagct
     6841 aagaccggca gagcagagca ttgtgccggg accccaaggt tttgccctgc gacgatatac
     6901 atcggttcgg catgcgatct cgtgccggcc accgagcagg cgagcgcgac cacggcgaac
     6961 agcgctacga atcttctata tctcatgagc ttttctcctt actcttttca gtctttcttg
     7021 tgacgcggac ctcgtgttca ttcccgcgac tagattccct cggttctcag cgaggagcgc
     7081 agatctagcg ctgctggttt gtcgtgactt gcgtgttctg aaacgcggcg atcttccaac
     7141 tctgtttgtc cctggtcatc accaacgtaa ttgacgcgtc ggccacgaac tgcttctcat
     7201 tctcaggagc atccaggtgt cccgaaacat ggacgagagc cacgtcgggc cgcaggaatc
     7261 gaatctgcct gacgacgagg cttatggtcg tgttcttata gaaagtatcg aatatccgct
     7321 ggtgcgcttt ctcgatggtc gtccggccct ggaggtacat cccgttgatg accacataat
     7381 ccgcatcatg ggtaaacggc ttcgcataca aagccccttg tttggcattc cagccgattt
     7441 ccatctgttt cacgttttcg cgcatggcgg cgtcatccgc gctgtgggcg ttcgaggcgc
     7501 gcgccttctg gtctgaaacg gtgaacatac acaggctgaa acttgccagg gtgaatagaa
     7561 gttttgtgct ggttcgggct cttttcattt ttcctccggt gatattggct ctcacttctg
     7621 aaagcgatga atgagattgg gagcggccac ctgcggaaga aaatttttgt aggtacagtt
     7681 ggcagtttcc taaatgggcg gtaacagggc cacacgcagc tttgccaaaa aaagtcgctg
     7741 aagggatgcg gctttgccgc cggatgaagg ggatcccacg cgaggcttga cggaagctca
     7801 gggctccgtc aggagcttaa tgtttataga acgaccgcgg tttttgagat tcaagctcct
     7861 ttaggagcgt aatggttgac ggtattgcgc tcctaaagga gcgccgggta aatctccaga
     7921 atcgagttct atacacatct cgctcctgac ggagcgaaac cgctctagtg gcgatgcgac
     7981 gcgtttaagc acttttggcc aaagcccctc aatgatgttc tttacggcat gcggcactgc
     8041 cgaaaaatga cctcacgccg gtcaacggtg ttagaatccg cgccgctggt cgagagtttc
     8101 tcaggccaac gggagcccca atgcacgcca cttcaccgct tgaggtaacc agactgctag
     8161 ctgattggag caaaggcgat gcggccgcgc tcgataaact ggttccgctg gtgcatgccg
     8221 aactgcgccg catcgctcaa cgccaaatga atcaggagcg ggccggccac actctgcaag
     8281 ccaccgcgct cgtcaacgag gcgtacctta aactggccgg tgagagcagt ttcgagtggc
     8341 atgaccgcgc gcacttcttc gccgtctgcg cgcaggtgat g
//
LOCUS       DATDBY010000224        11125 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1850406, whole genome shotgun sequence.
ACCESSION   DATDBY010000224 DATDBY010000000
VERSION     DATDBY010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 11125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11125
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1850406"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1275)
                     /locus_tag="VIT19_04200"
     CDS             complement(<1..1275)
                     /locus_tag="VIT19_04200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838215.1"
                     /translation="MGCLLINKVRTALVLTLVVMLSSVPALAGLTIFGSNGITASGAD
                     GVSFVNTSGITASGADSFLAFKPNGITASGADGITASGADGITASGADGITASGADST
                     TINRADSLTVVGSNGITVSGADGNSYQADSVTIRNPTGITASGADNVIATGTNGITAS
                     GADTRGIAHSDGITASGADSTIAITGTDGITASGADGVIFSITPGSLTITGVNGITVS
                     GADGITISGADSFIKTGVAALVAALNDNGVQVGLVGVDPELAVLLNNLTDDSNVAAVI
                     VYHHLPTDADVAELQSIGVLGGTRYRMLPMISLTTTKARLRAISRLASVRSIYGNRTF
                     QWDLEPATRSLTGSDRVSRNNELTVANHGVALSGRGVTVAVLDTGVDGTHADLAGRVV
                     NNVKLGDTQGQGVGFNYPVASPNLPSTDQVYGH"
     gene            complement(1479..4787)
                     /locus_tag="VIT19_04205"
     CDS             complement(1479..4787)
                     /locus_tag="VIT19_04205"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEY5838216.1"
                     /translation="MVKGERKTARPTPPTTAAAPLALPGTFFLRTKLLAPRPAPELLN
                     RERLIERLRANLSLPVTLVAANAGSGKTTLVADFLRKQEQPYVWYQLDHTDSDPAVFL
                     GYLAHGIQQRVSDFGETIFAYLQAGELVQEPERAADVLLNEILERVEQQLIVVLDDYH
                     HLGTETPVHAVVDRLITYLPDVVHVIIISRDVPPLTLARLRSQESLAIIDRNDLLFTA
                     EETQELFRKVFGLALTPEQLQEYGERTHGWITALQLVRQVAQRLVPAGDGHADPLSVL
                     HQSERDIFEYFAEEVFSAEPQDIQHYLMRVALLDRIEVNTCARLYPEVISSAILPQLV
                     RRNVFLTVASDARGEEYRLHPLFQSFLRRRLRTEIGLSGVAAEHVRCADHLLERGNWD
                     QGVRHLLEAEDFERAGEVIAAHGADWIASGKLASLVALAEALPPTVLEAQPRAMAHRA
                     EVARLRGEFDTAQSLFRRAAAALRSKGDDEGEADALHSLATIARRQGDHDAAFQYLDR
                     AVELTQPESAVRTKCGNTRGLCFVSLGEWTAAEREFRVALQSAEERNDEHHIRLITHN
                     LGLPAMMRGDFGEALHWLRRMLRTDGHEAPIPQEAWAHLNIARCHLYRGEMEECERHL
                     DLALERCQLFNLVGQQGEAFEAYGNLYRERGAMTRAAEFYERAARAYDEAGIEQSRVE
                     LFEEQALLSLKAGDLARARGQIDRLIELRSARNDDAGVFTATLAHARIMIAAREFEAA
                     REKLVPTLEYFRPRGLHYYEAQACIDLATCESELGHEPQMLEYLRRVLDLAARYDYDY
                     WLRQEIAHRPSLFASDLAQEILPADLRAQVPAVATVAPQPVTAADLTPGPLVDLTLNM
                     LGPVEIFRDPARPFAPDAWTTRRARDILCFIVSRRHHRAPKDSIIDMFWTEDNIETIE
                     KNFHPTVSHIRKALNSNQPLKQNFIIYRDGDYQLNPEFSYRIDTDTLERLIADGEAAR
                     RERNYERCIECYEEAVALYRGEFMQGTYEPWVDEQRSYYREQHLRMLESLAAVAEKKA
                     EWPRTMDLAQRILHEDQFREDIHCMLMRAQAAVGNRVAVKAQYETLRELLQNELGVEP
                     AMQTQKAFQELMES"
     gene            complement(4959..5774)
                     /locus_tag="VIT19_04210"
     CDS             complement(4959..5774)
                     /locus_tag="VIT19_04210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838217.1"
                     /translation="MLREDNHLIHDKITVPTQKPRTSRPRLLDVLTDNLTNYTATIVN
                     GRAGTGKTTLSAEFARRATRPVCWYKVDAADAELGVFCQYLISTLRLQRPTLEPKRLM
                     EITESVESDRAEVLAEAFVFQLAEPQQVGEEPLLIIIEDLHLIYDADWVVPFFHRLLP
                     LLPADIHLIITCRSLPPAPLWRLRSKQMLRVIEETELAFTLEETARLFETYGLSEEHA
                     RIALRDTNGRAAAIANFAATPGRAGRAVADSFLAIESRPATSSMGQISSELPT"
     gene            6064..6510
                     /locus_tag="VIT19_04215"
     CDS             6064..6510
                     /locus_tag="VIT19_04215"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY5838218.1"
                     /translation="MPSTHISLHTHLVFSTKERLPVIRSEWRERLHAYLGGIVKGLGG
                     TPLAVGGTSDHAHVLVGLKSSHRLDYFVRDLKADSSEWIHREIGRRLFAWQKGYGAFA
                     VSASNVERVRRYVTNQEQHHSRLTFQEEYLRLLQESGVAYDERYLW"
     gene            6919..7041
                     /locus_tag="VIT19_04220"
                     /pseudo
     CDS             6919..7041
                     /locus_tag="VIT19_04220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_263013145.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
     gene            7078..7401
                     /locus_tag="VIT19_04225"
     CDS             7078..7401
                     /locus_tag="VIT19_04225"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEY5838219.1"
                     /translation="MKAYQADIAKFEATETQIFGISVDSVPANREFAKKEGITFPLLS
                     DFAKRSVVKDYGIFSEDNGFGVRATFVIDKNGVIQHIKEGNEAIDPASAMDACNILTH
                     KKASP"
     gene            7570..8292
                     /locus_tag="VIT19_04230"
     CDS             7570..8292
                     /locus_tag="VIT19_04230"
                     /inference="COORDINATES: protein motif:HMM:NF014600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEY5838220.1"
                     /translation="MQSYLNKPFFISDPQARIRTGDDLLTYVLEEGRPKLIPNGSEIR
                     ITDVRVLRETVYVNAENFGWTAATNLKNRFLNETVGVFEPQDNDQRGPNAAWDAGRFL
                     KQITLVQIVGADNQLKFISLDIADEYLALVNAAEAAGVLMPLKSGFRTYPKQAYLRDG
                     WERRLPRFNLAAKPGFSNHQDGFAYDFAIDAYAGNPRYDWLKRNGPQHGFVRTVSGEP
                     WHWEYRPAIAQTGAFKAPGVTP"
     gene            complement(8438..8827)
                     /locus_tag="VIT19_04235"
     CDS             complement(8438..8827)
                     /locus_tag="VIT19_04235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838221.1"
                     /translation="MKRSLQVIAIFGVMVFSGFFAANVSAQTGPVAGVYENFTVGKES
                     GDLVGMRIVIIPAHNTFYAMVQIAQGGAEDPKPEFVDATVKGNTVEFTVGDQKYTGIV
                     GIAGFRVKDPDGQTHVLKRRPCATLFK"
     gene            complement(8869..10461)
                     /locus_tag="VIT19_04240"
     CDS             complement(8869..10461)
                     /locus_tag="VIT19_04240"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEY5838222.1"
                     /translation="MKRTSPWIFVLIMAMAVSAIAQPRPRAKRAGRPASADPTSKQTP
                     ASNPTAAATPAPTPTAPSTSAPVLAVVDNVTITSTDIESKVFSVISGDAELSAFHQDR
                     EKAIREARQRAVDARVSSMLIAAEAKKRGLALEEFLAREVTGRTPTPTDAEVRAVYDA
                     NRAQFANTELEAARPTIVNYLRNERSAKAYGDLVNRLKMTNTVQKGADVNAPNLAPGI
                     VLASVNGQPLRIEAINERMKAYIYKFDRQIYEAQKRALDQRINDTLILAEANKKNIGP
                     EVIIRTEITDKLKAPSETEIAKFYQENKSQINGDLASTRGAIANYLQEQQQQKLEEEL
                     AARLRAGAKLQMFLQAPVAPVFNVAVGRGIARGDISAPVKIVEFTDFQCSACGAMYPV
                     IEEVLKAYGNRVYFEVRNFPLSSIHENAFEAAQAAAAANAQGKFWPYIDLLYKNQKSL
                     DTESLKKFAAQAGLDRARFDADLANGKFAADIRRDIEEGEQYGIEGTPTIFINGVVLT
                     SLSVDGLREAIDKGLARAGKAQ"
     gene            complement(10627..>11125)
                     /locus_tag="VIT19_04245"
     CDS             complement(10627..>11125)
                     /locus_tag="VIT19_04245"
                     /inference="COORDINATES: protein motif:HMM:NF016557.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838223.1"
                     /translation="FDAARARGNEGLMIKDPRSSYKPGRRGREWLKLKKALATLDVVV
                     TAVELGHGKRRNVLSDYTFAVRRSENDPELLNIGKAYSGLTDVEIAEMTAWFRAHTLQ
                     EYAHGRVRIVEPTVVIEVTFDRVQPSNRHKSGYALRFPRIVRLRRDKMAPEIDTLDTV
                     KKLVA"
BASE COUNT         2258 a         3266 c         3199 g         2402 t
ORIGIN      
        1 gtgaccataa acctggtcgg tgctgggcag attcggcgag gcgaccggat agttgaaacc
       61 aacaccctga ccttgcgtgt cgcctaactt cacattgtta accacgcggc ctgccaaatc
      121 ggcatgagtg ccatcaactc cagtatcgag caccgccacc gtgactccgc gaccgctcag
      181 cgctactcca tggttggcga cggtgagctc gttatttcgc gacacgcggt ctgatcccgt
      241 tagacttcgc gtagcaggct cgagatccca ttgaaacgtg cggtttccat aaatcgagcg
      301 gaccgaggcc aagcgagaaa tcgctctcaa tcgagctttg gtggtggtca acgaaatcat
      361 cggcaacatc cggtaacgcg tgccaccgag aactccaatg ctctgcaact ctgcaacgtc
      421 cgcatccgta ggcaggtggt gatagacaat taccgcagcc acgttgctgt catcggtcag
      481 attgttcagg agcactgcca gttccgggtc gacgcccacg aggccaacct ggacgccgtt
      541 atcgttgagc gccgccacca gcgcggccac tccggtttta ataaagctgt cggctccact
      601 gatcgtaatt ccgtcagcgc cgctaaccgt tatgccgtta actccggtta tcgtgagcga
      661 acccggcgta attgaaaaga tcacgccatc cgcgcccgat gccgtgatgc cgtcagtccc
      721 ggtaattgcg atcgtgctgt cggccccgct ggccgtaatt ccatctgagt gagctatgcc
      781 acgcgtgtca gcgccgctgg cggtaatgcc gttggtaccc gtggcgatta cgttatcagc
      841 cccgctggca gtaattccgg taggatttct gatggtgacc gaatcggcct gataactatt
      901 cccgtcggcg ccgctgacgg taatcccatt cgagcccacg accgtaagac tgtctgcccg
      961 gttgatagtg gttgaatccg cccccgaggc ggtaatgccg tcggccccgc tggccgtaat
     1021 gccgtctgca cctgaagcgg tgattccatc tgcgcccgaa gcagtaatac cgtttggttt
     1081 aaaggcgaga aagctgtcgg caccgctggc cgtgattccc gaagtgttaa caaaacttac
     1141 gccatcggcg ccggacgcag tgatgccgtt cgagccgaat atggtcaggc cggcgagcgc
     1201 aggcacgctg ctcagcatta ccaccagagt cagcaccagc gcggttctta ctttgttaat
     1261 taaaagacag cccatcttta caagccaacg ccacggtcgg gtcaagacag tggcttgtcg
     1321 ttaaaactca ggcgaggcgt gttgtcaaaa caaaagaact gagacgaccg ggattctaaa
     1381 tcgctgatag ccgtgcgttt gttgcgttcc ctttgcaatt ttctcgccct ttctcgacct
     1441 ctattttttc cctattcgcc aacaattaaa gcggttcctc agctttccat cagctcctga
     1501 aacgccttct gtgtttgcat tgcgggctcg acaccaagct cgttttgcaa gagttcccgc
     1561 aacgtttcgt actgcgcttt cacggcgacg cggttcccca ccgccgcctg tgcgcgcatc
     1621 aacatgcaat ggatgtcctc gcggaattgg tcctcgtgca ggatgcgctg cgccagatcc
     1681 atcgtccgcg gccattccgc cttcttttcg gcaacggcag ccagcgattc cagcatccgc
     1741 aggtgctgct cgcggtaata cgagcgctgc tcatcgaccc agggctcgta agttccctgc
     1801 atgaactcgc cgcggtacaa ggccacggcc tcctcgtaac actcgataca gcgctcatag
     1861 ttacgttcgc ggcgcgccgc ttcgccatct gcgatcaggc gctccaacgt gtctgtgtcg
     1921 atgcggtaag agaactcagg attcagttga taatcgccgt cgcgatagat gatgaagttc
     1981 tgcttcagcg gctggttact gttgagcgcc ttgcgaatgt gcgagacggt cggatgaaaa
     2041 ttcttttcga tcgtttcgat attgtcctca gtccagaaca tgtcgatgat cgagtctttc
     2101 ggcgcgcgat ggtgccggcg cgaaacgatg aagcacagaa tgtcgcgggc acggcgggtc
     2161 gtccacgcat cgggcgcgaa aggacgggcc ggatcgcgga agatctcgac cggtcccagc
     2221 atgtttaggg ttagatcgac caggggtccg ggcgtcaggt cggccgccgt cacgggttgc
     2281 ggcgccaccg tggccacggc cgggacctga gcgcgtaagt ctgcgggcag aatttcctgc
     2341 gccaggtctg aagcgaacag cgacgggcga tgcgcaattt cctgccgcag ccaatagtcg
     2401 taatcgtaac gcgccgcaag atccagaacc cgccgcaggt attcgagcat ttgcggctca
     2461 tgaccaagtt ccgactcgca agttgccagg tcgatgcacg cctgagcttc gtagtagtga
     2521 aggccgcgcg gacggaaata ttcgagcgtg ggaaccagtt tctcgcgcgc cgcctcaaat
     2581 tcgcgcgccg cgatcatgat tcgggcatgc gccagcgtcg ctgtgaacac tcccgcgtcg
     2641 tcatttcgcg ccgaacggag ctcgattaac cgatcaatct ggccgcgcgc gcgtgccaga
     2701 tcgccggcct tgagacttag cagcgcttgt tcttcaaaca gttcaacgcg cgattgctcg
     2761 ataccggctt cgtcgtaggc gcgcgcggct cgctcataaa actcggcggc gcgcgtcatc
     2821 gcgccgcgtt cgcgataaag attgccgtag gcttcgaagg cctcgccctg ctggccgacg
     2881 agattgaaaa gctggcagcg ctcaagcgcc aaatcgagat gcctttcgca ttcttccatc
     2941 tcgccgcggt acaggtggca ccgcgcaatg ttcaggtgcg cccaggcttc ctgcggaatc
     3001 ggcgcctcgt ggccgtccgt acggagcatg cgccgtagcc aatgcagcgc ctcaccaaaa
     3061 tcgccgcgca tcatcgcggg caggccgagg ttgtgcgtga tcagccggat gtgatgttcg
     3121 tcgttccgct cttcggcgga ttgaagcgcg acgcgaaact cgcgctcggc ggccgtccat
     3181 tcgcccagcg acacaaaaca aagtccgcgc gtatttccgc atttggtgcg cacggcggac
     3241 tcaggctggg ttagctcaac cgccctatcg aggtattgga aagcagcgtc gtggtcgccc
     3301 tgacgtcgcg cgatcgtcgc caaagagtga agggcgtccg cttcgccttc gtcgtcgcct
     3361 ttcgagcgca gcgccgcggc ggcccggcgg aaaaggctct gcgccgtgtc gaattccccg
     3421 cgcagacgcg cgacttcagc gcgatgcgcc atcgcccgcg gctgcgcttc caacaccgtg
     3481 ggcggcaaag cttcagccaa cgctaccagc gacgcgagct tgcccgaggc gatccagtcg
     3541 gcgccgtgcg cggcgatcac ttcgcccgcg cgttcgaagt cctcggcttc cagcaaatgc
     3601 cgcacgccct ggtcccaatt gccgcgttcg agcaagtggt ccgcgcagcg cacatgttca
     3661 gcggccacgc ctgacaggcc gatctcggtg cgcagacgcc gccggaggaa actctgaaat
     3721 agcggatgaa gacgatactc ttcgccgcgc gcatcgctgg cgaccgtcag gaaaacgttc
     3781 cggcgcacaa gctgcggcag gatggccgac gaaatcactt cgggatagag ccgcgcgcag
     3841 gtgttcacct cgattcgatc cagcaacgcc acgcgcatca ggtaatgttg aatgtcctgc
     3901 ggctcagcgc tgaagacttc ttccgcaaag tattcaaaga tgtcgcgctc tgactggtgg
     3961 agaacgctaa gcggatcggc atgtccatca ccggcgggca ccagccgctg cgcgacctga
     4021 cgcaccaatt gcagcgccgt gatccagccg tgtgtgcgtt cgccgtactc ttgcaattgt
     4081 tccggcgtca gggcgaggcc gaatactttg cgaaagagct cctgcgtttc ttccgcggta
     4141 aagagcagat cgttgcgatc gataatcgcc agtgattcct gcgaacgcag gcgtgcgagc
     4201 gtcagcggcg gcacgtcgcg cgagatgatg atgacgtgca ccacatccgg gagataagtg
     4261 atcagccgat cgactaccgc atgtacggga gtttccgtgc cgaggtggtg ataatcatcg
     4321 agcacgacga ttagctgctg ttcaacccgc tcgagaatct cgttcaacag cacgtcggcg
     4381 gcgcgctcgg gctcttgcac cagctccccc gcctgcaaat acgcaaagat cgtctcgcca
     4441 aaatcgctga cgcgctgttg gattccatgc gccaggtaac cgaggaagac cgcggggtca
     4501 ctgtccgtgt gatcgagctg ataccagacg tagggctgct cctgcttgcg cagaaagtcg
     4561 gctaccagcg ttgtctttcc ggatccggca ttcgcggcaa ccaaagtcac cggcagcgaa
     4621 aggtttgcgc gcagccgctc aatcagcctt tcccggttta gcaactccgg cgcaggccgg
     4681 ggcgcgagca attttgtgcg caggaaaaac gttccgggca gcgcgagcgg cgccgcggca
     4741 gtggtcggcg gagtgggcct ggcggttttg cgttcgccct taaccatctc agtttccaga
     4801 acagattgtc gtgaactgcc gcggagagta gcacagccaa aaccgggact tctatgcgtt
     4861 gttacgcgtt cggataactg cgcgccagcg gcgacgccgg tagtttgaac gggcgcaaag
     4921 gtcgatttcc cgactagtcg ggactgccga gtttccatct acgttggcag ttcggagctt
     4981 atctgaccca ttgagctggt tgcgggtcgc gactcgatgg ccagaaagct gtcggctacg
     5041 gcccgaccag cgcgtccggg tgtggcggca aagttcgcaa tcgccgcggc gcgaccgttg
     5101 gtatcgcgca gagcgatgcg cgcgtgctct tcgctcaagc cataggtttc gaacagacgc
     5161 gcggtctctt ccaaagtaaa agccagctcg gtttcttcga tgacgcgcag catttgcttg
     5221 gaacgcagac gccagagcgg cgccggcggc agactgcggc acgtaatgat caggtggata
     5281 tctgccggca gaagcggcaa caggcgatga aagaacggta cgacccagtc ggcgtcgtaa
     5341 atcaagtgca ggtcttcgat gattatcagc aaaggctctt caccgacttg ttggggttca
     5401 gccaactgga aaacaaatgc ctcagccaac acttcggcgc ggtcgctctc gactgactcg
     5461 gttatttcca tcagccgctt gggttccagc gtcggtcgct gtaaacgaag cgtcgaaatc
     5521 agatactggc agaacacgcc aagttcagcg tcagccgcat cgaccttgta ccagcacacc
     5581 ggtcgagtgg cgcggcgggc gaactccgcc gacagcgtgg tttttcccgt tcccgcgcgt
     5641 ccgttcacga tggtggccgt gtaattcgtc aggttgtccg tcagaacgtc gagcagacgc
     5701 ggccgcgaag tgcggggttt ttgcgtggga accgtgattt tgtcgtgtat caagtggttg
     5761 tcttctctga gcatctttga atccttgtgg tgtgggaatt tcctcgcccg gacccgctag
     5821 cgtcagggtg atcgcattat ccgaaggcgg cttgaggaat tcttgagttt tgattgcaat
     5881 cggcgaaagc ccgcgacaat ggaaagaatt tgcacattgc acgtgttcgc taagtgcggt
     5941 atttagcggg tacaaggtca tgctctgcgg gctccggcgg cgaagccgcc attccgaagg
     6001 tagccagacg tgcaacgtct ggaacgagtg ggcgtgaacg cgcgtcggag acgcggaacg
     6061 aatatgcctt ctactcacat tagtcttcac acccacctgg ttttctcaac gaaagaacgg
     6121 ctacctgtaa ttcgctcgga atggcgcgaa aggttgcacg cttatctcgg cggaattgtt
     6181 aagggcctcg ggggaacacc cctcgcggtc ggcggaacgt ccgatcacgc tcacgtatta
     6241 gtcggtctta aatcatccca tcgtctcgat tacttcgtga gagatctgaa ggctgactct
     6301 tcagagtgga ttcaccgcga gatcggcagg cggttgtttg catggcaaaa aggatacgga
     6361 gcattcgcgg tgagtgcctc aaacgttgag cgagtaagga ggtatgtcac caaccaggag
     6421 caacatcata gtcggctgac gtttcaggag gagtatttaa ggctgctgca ggagagcggc
     6481 gtcgcatacg atgagcgata tctttggtga gagctttgcg catctctgat gcgcgccacc
     6541 gttgatgctg aatttccaga cgtttcacgt ctggctaccg tcgggtggcc gctttgcggc
     6601 cgataaggtt cgggccccga atcctcattg tcagaacctc gctcgcgagg ttaactctcg
     6661 ccgcttcgcg gctgggccac tgagttcggc tgtgccgact gcgtaactca ttgtcagaac
     6721 ctcactgccg gatgtaaact ctcgccgctt ccgagactgt aaccaggagt caccaagatg
     6781 cttaagaaaa tcatctccgc cattttcatc ctcgtcaccg cgtcactggc cgtcgcgcaa
     6841 acaacgccgg ccccgacacc gacagcgtca ccaactccag tgagaccggc agcaccggcg
     6901 ccgccaaaga ctcacctgaa agtcggcgac aaggcgccgg atttcacttt gccgagcacg
     6961 attgccgcgc cggacggccg ctcatcagtt cgttacaagc tgagtgactt tcagggcaag
     7021 aagaacgtcg tgctcgcatt ttacgtgctg gcgttcaccg gtggttgaac gcgcgaaatg
     7081 aaggcgtatc aggctgatat cgccaaattc gaagctacgg aaactcagat tttcggcatc
     7141 agcgttgaca gtgttcccgc taatcgcgag ttcgcgaaga aagagggcat tacatttccg
     7201 ctgctgagcg acttcgcaaa gcgttccgtc gtgaaggact atgggatctt cagcgaagat
     7261 aacggctttg gcgtgcgggc gaccttcgtc atcgacaaga acggggtcat ccagcacatc
     7321 aaggaaggca acgaagccat cgacccggca agtgcgatgg acgcctgcaa catcctgacg
     7381 cacaagaaag cctcgccata gcggcgacgt acgttctttt ttccctttgc gatcttttgc
     7441 gtcttggcgt gaaattgtct cttcagaagc ggttggttca cgcaaaggcg ctaagcccgc
     7501 aaagacacgc aaagtaagac acgacgcgtc tcgctagtac tctcaactaa gctcgaaagg
     7561 tgaatcatca tgcaaagcta cctcaataaa ccttttttca taagcgatcc tcaggcgcga
     7621 attcgtaccg gagacgatct gctgacctat gtgttggagg agggccggcc aaagctgatt
     7681 cctaacggca gcgaaatccg aataaccgac gtgcgcgttt tgcgcgagac ggtttacgtc
     7741 aacgctgaga attttggctg gacggcggcc acgaatttga aaaacagatt cctcaacgaa
     7801 actgtgggcg tgtttgagcc gcaggataat gaccaaaggg gcccgaatgc cgcgtgggac
     7861 gccggcaggt tccttaaaca gataacgctc gttcagatcg tcggcgccga caaccagttg
     7921 aagttcatct cgctggacat cgccgacgag tatctcgccc tggtgaacgc ggctgaggcc
     7981 gccggggtgc tgatgccgct gaaaagcggc tttcgaactt atccgaagca ggcgtatctc
     8041 cgcgacggtt gggagcggcg cctgcccaga tttaatctgg ccgcgaaacc cggcttctca
     8101 aatcaccagg acggttttgc ctacgacttc gccattgacg cgtacgcggg caacccgcgg
     8161 tatgactggc tcaaacgaaa cgggccgcag catgggttcg ttcgcactgt gagtggagag
     8221 ccgtggcact gggagtatcg accggcgata gcgcaaacgg gcgcgtttaa ggccccggga
     8281 gtaaccccat aacgtaacgg agcacgttac gagagaaagt ggcggcgcag gtcagattaa
     8341 ccatcgccgc cacagttttt tcccgccttg tggcacagac ttccgtctgt gatatttctt
     8401 ccgcgggtta actgtgccct ctctctgttc tacgcgccta cttaaacaac gtcgcacatg
     8461 gcctgcgctt cagcacgtgc gtctggccgt cggggtcttt gactcgaaat ccagcgatgc
     8521 caacgatgcc ggtgtatttt tgatcgccga cagtgaactc gaccgtattg cctttgacgg
     8581 tggcatcgac aaactcgggt ttcggatctt ccgcgccgcc ctgcgcgatt tgcaccatcg
     8641 catagaacgt gttgtgcgcg ggaataatca cgatgcgcat tccgaccaaa tcgcccgact
     8701 ctttgccgac cgtgaagttt tcataaacac ccgcaaccgg cccggtctgc gcggatacat
     8761 ttgcggcgaa aaaccccgaa aagaccatca caccgaaaat tgcgataact tgtaagctgc
     8821 gtttcatctg aatctccctt aattgaaaaa tgtagtgtag aagagctgtt attgcgcttt
     8881 acccgcgcgg gccaggcctt tgtcaatcgc ttcgcgcaga ccgtcgacgc taagtgaagt
     8941 caggacgacg ccatttatga aaatcgtcgg cgtgccttcg atgccgtact gttcgccttc
     9001 ttcgatgtca cggcgaatgt cggccgcaaa ctttccgttc gcgaggtcag cgtcgaaccg
     9061 cgcgcgatcc agcccggcct gcgccgcaaa ctttttcaag gactcagtgt cgagcgactt
     9121 ttggttcttg tagagcagat cgatgtacgg ccagaacttg ccttgcgcgt tcgcggcggc
     9181 cgcagcctgt gcagcctcaa acgcgttttc gtgaatcgag ctcaacggaa agttgcgcac
     9241 ctcaaaatac acgcgattgc cgtaggcctt cagcacttcc tcgattacgg gatacatcgc
     9301 gccacacgct gagcactgaa aatcggtgaa ctcaacgatc ttaaccggcg cgcttatgtc
     9361 gccccgcgcg atgcctctac cgaccgcgac attaaaaacg ggcgccacgg gtgcttgcaa
     9421 aaacatttgg agcttcgcgc cggcgcgcag acgagccgcc aactcctcct ccaacttctg
     9481 ttgctgctgt tcctggagat agttcgcaat cgcgccgcgc gtgctggcca ggtcgccgtt
     9541 tatctgcgat ttgttttcct ggtaaaactt cgcgatctca gtttcgctcg gcgctttcag
     9601 cttgtcagtg atttcggtgc gaatgattac ctcgggcccg atgtttttct tatttgcttc
     9661 agcgagtatc agcgtgtcat tgatgcgttg atcgagcgct cgtttctgcg cttcgtaaat
     9721 ctgccgatca aatttgtaga tgtaagcctt cattcgctcg ttaatcgctt caattctgag
     9781 gggctgaccg ttcacggacg ccagaactat tcccggagcg agattcggcg cgttaacgtc
     9841 cgcgcctttc tgaaccgtgt tcgtcatttt cagccgattg accaggtcgc cgtaagcttt
     9901 tgcactgcgt tcgttgcgca gataattaac aatcgtgggc cgcgctgctt ccaactccgt
     9961 gttagcaaac tgcgctcgat tcgcgtcgta cacagcgcgc acttccgcat cagtcggcgt
    10021 cggcgtcctg cccgtaactt cgcgagccaa aaattcctcc agtgccaggc cccgcttttt
    10081 ggcttcggcg gcaatcagca ttgagctcac ccgcgcgtca accgcgcgct ggcgcgcctc
    10141 gcggatcgct ttttcgcggt cttgatgaaa agcgctgagt tcggcgtcgc cgctaatcac
    10201 ggagaacacc ttagattcga tgtcggtcga tgtgatcgtc acgttatcga cgactgcgag
    10261 taccggcgcg cttgttgaag gcgcggtcgg agtcggcgcg ggcgtggcgg cggcagttgg
    10321 gtttgaagca ggcgtctgct tcgaagtcgg atctgcggac gcgggtcggc cggcccgttt
    10381 tgcgcgcggg cgtggctgcg cgatggcgct aacggccatc gccataatca gaacaaaaat
    10441 ccagggggaa gtgcgcttca tgaattgcat ctttctagtc agagtcgtga gttgtcaact
    10501 cgcgccaggc aaagatttgg agtgcgccga cgttggcggc gctttggatt ctttctaacg
    10561 aacgctacag gaaatccaaa gcggcgtcgc gctttgcttg ccgccgcact ccaaattcgc
    10621 gttcgcttag gcgacaagct tcttcactgt gtccaacgtg tcgatttcgg gggccatctt
    10681 gtcgcggcga agtcttacga tgcgcggaaa gcgcaaagcg tagccgctct tgtgacgatt
    10741 tgagggctgt acacgatcga aagtcacctc gatgacgacc gtcggctcga caatgcggac
    10801 gcgcccgtgc gcatattcct gcagagtatg cgcgcgaaac catgcagtca tctcggcaat
    10861 ttcaacgtca gtcagacccg aataggcttt gccaatgttc agcagttccg gatcgttttc
    10921 cgagcggcgc accgcgaatg tgtaatccga aagcacgttg cgtcgtttgc cgtgaccgag
    10981 ttccaccgcg gtcacgacca cgtccagggt cgccagcgcc ttctttaatt tcagccactc
    11041 acgcccacgc cgaccgggtt tgtatgaaga ccgcgggtct ttaatcatca agccttcatt
    11101 gccgcgtgcg cgcgccgcgt cgaat
//
LOCUS       DATDBY010000225         2395 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1735423, whole genome shotgun sequence.
ACCESSION   DATDBY010000225 DATDBY010000000
VERSION     DATDBY010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2395
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1735423"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VIT19_04250"
     CDS             <1..282
                     /locus_tag="VIT19_04250"
                     /inference="COORDINATES: protein motif:HMM:NF012571.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838224.1"
                     /translation="ATSPDALETLSRVYWFTIEFGVLREDGQLKAYGTGLLSSAGELE
                     EMREAELRPLDILAITQQNYDPTHFQPVLFCADSFAAMHEQLRAYLTGW"
     gene            324..1592
                     /locus_tag="VIT19_04255"
     CDS             324..1592
                     /locus_tag="VIT19_04255"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HEY5838225.1"
                     /translation="MPEKKSDTDIDTQVVHAGERRPMPPGQPTSMPIYASVTYAYDSV
                     AEMDRVFAGQAPGYVYTRHGNPTTDALAEVLCEIESGATACVYGSGMAALHAALLTCG
                     VSAGTTVLASQDLYGATTNLLHSIFGALGVKTVIADFADLDQVRALANEHKPRVLLAE
                     TISNPLLKVCDIDACAEIAREAGARLIIDNTFASPYLCQPLKHGADIAVHSATKFLGG
                     HADAMGGVAISQHEADGDSLVRVMKYVGGVLSPWDAHEILRGIKTLAVRMERHCENAS
                     AVAAWLSKDARVARVHYPGMEGTHASGVQHSGRNAYREVANRILCAPYFGALVSIELK
                     DNSREGAFRFMDALNLCVRSTSLGDVFTSVLHPATASHRDLDPARREALGITDGLIRM
                     SVGIENVKDIVADIEQALNAVSAPEAAATG"
     gene            1844..2164
                     /locus_tag="VIT19_04260"
     CDS             1844..2164
                     /locus_tag="VIT19_04260"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY5838226.1"
                     /translation="MEEITATELKQRIDQGDDLQIIDVREQHEFEIGRIPNSNLIPLG
                     QVLNRMDEIDPNRETVVHCKMGGRSAKAIEALQRSGFTGRLMNLKGGITAWSNEVDAS
                     VPKY"
BASE COUNT          512 a          673 c          732 g          478 t
ORIGIN      
        1 gcgacttccc cggacgcact ggaaactctg tcgcgcgtgt actggttcac gatcgagttt
       61 ggcgtgctgc gcgaagacgg acaattgaag gcctacggca ccggcctact ctcttcggcc
      121 ggcgaacttg aagagatgcg cgaggccgag ttgcgaccac ttgatatact cgcaatcact
      181 caacagaact acgacccgac gcactttcag ccggtgctgt tttgcgcgga ttcgttcgcc
      241 gccatgcacg agcagttgcg cgcgtatctc actggttggt agcttccagc caggacgtta
      301 tagaatctgc gccggtcacg atcatgcctg agaagaaatc cgatacagac atcgacaccc
      361 aggtggtgca tgcgggcgag cgcaggccta tgcctcctgg gcaaccgaca tcgatgccga
      421 tttacgccag cgtcacttat gcgtatgact cggtagcaga aatggatcgc gtgttcgcgg
      481 ggcaagcgcc gggctacgtt tacacgcgtc acggcaatcc gacgactgat gcattggccg
      541 aagtcttatg cgaaatcgaa agcggtgcga ccgcgtgtgt ttatggatca ggaatggccg
      601 cgctgcatgc ggcgttgctg acgtgcggtg tgtcggcggg aacaaccgtg ctggcgtcgc
      661 aggatttgta cggggcgacg acaaatctgc ttcactcgat attcggcgcc ttgggtgtga
      721 agacggtcat cgctgacttc gcagatctcg atcaggtccg cgccctggcg aatgaacaca
      781 agccgcgagt actcctggcc gaaacgatct cgaatccgct ccttaaagtt tgcgacattg
      841 acgcatgtgc tgaaatcgcg cgtgaagccg gcgcgcgatt gatcatcgac aacacgtttg
      901 cctcgccgta tctatgccaa cctctgaagc acggcgccga catcgccgtt cacagcgcga
      961 caaaatttct cggcgggcac gccgacgcca tgggaggcgt cgcaatctcg caacacgagg
     1021 ccgacggtga ttcattggtg cgcgtcatga aatacgtggg cggtgtgttg agtccgtggg
     1081 acgcgcacga gattctccgc ggcattaaga ccttggcggt gcggatggaa cggcactgcg
     1141 agaatgcttc ggcggttgcg gcgtggctca gcaaagatgc gcgcgttgct cgcgttcact
     1201 accccggcat ggaaggtacg cacgcctctg gcgtgcagca ttccgggagg aatgcgtacc
     1261 gggaagtcgc gaaccgcatt ctgtgtgcgc cgtatttcgg ggcgttggtt tcgattgagt
     1321 tgaaggacaa tagccgcgaa ggagcttttc gattcatgga cgcgctgaac ctctgcgttc
     1381 gctcaaccag tctcggtgac gtcttcacga gcgtcctaca tcccgcgact gcttcgcatc
     1441 gcgatctgga tccggcgcgc cgcgaggcac ttggcattac cgacggtctc atccgaatgt
     1501 cggttgggat cgaaaacgtc aaagacatcg ttgctgacat cgaacaagct ctgaacgctg
     1561 tgtcggcgcc ggaagcggcc gctacgggat aaaacccggt gtcagtaccc ggagcggacc
     1621 ggggtcccgg cgcgggcagc ccgcgtgggg tggtggaagc gacggggtca tagcgcctgt
     1681 cagtacccgg agcggtaatt tggagtgcgc cggcagaggg gagcgacgac ggcgctttgg
     1741 ttcaatggta tccaaagcgg tgtcgcgcta cgcttgccac cgcactccaa attacggtag
     1801 cgacggatca caagatcaag tttagaaagc accagaggac tcaatggaag aaatcaccgc
     1861 aactgaactc aaacaacgca tcgatcaagg cgacgatctg caaatcatcg acgtgcgcga
     1921 gcagcacgaa tttgaaatcg gccgcatccc caactccaac ttgattccgc tgggccaggt
     1981 actgaatcga atggatgaga tcgatcccaa tcgcgagact gtcgtccact gcaagatggg
     2041 cggccgcagc gcaaaggcga tcgaagccct acaacgttcg ggattcactg gccggctgat
     2101 gaatttgaaa ggcggaatta cggcctggtc gaatgaagtc gacgcaagcg taccgaagta
     2161 ctgactttgg tacgcacgcc tctgacgtgc tcttcagtgc gaaaacggca cgccggaggc
     2221 gtgcgtaccg agaagctcac ttcttccctc gcatcttgtc ggcgacgcgc tgtcgctgtt
     2281 tgtcgaaata ggcttttgcc ttcgtcagaa gtctctgggc ccagacaaac tccgtcgcca
     2341 ggatcgcgag gcccagcgga attatgatga acgccggtcc gggaaggatg atcat
//
LOCUS       DATDBY010000226         2147 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_217441, whole genome shotgun sequence.
ACCESSION   DATDBY010000226 DATDBY010000000
VERSION     DATDBY010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217441"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            262..1356
                     /gene="tilS"
                     /locus_tag="VIT19_04265"
     CDS             262..1356
                     /gene="tilS"
                     /locus_tag="VIT19_04265"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEY5838227.1"
                     /translation="MKTKRKQVGRAVPSKLARKQPISKFARALLQEWRSLNLPLSDAV
                     AVVGVSGGADSVALLLAADELIKGSKLNIRIVVAHLDHRLRKESGDDARWVKELATRL
                     GHEASIKRVPVKSLARRGGDNLEQAARLARYKWFAELAQKRGANFVLTAHTMDDQAET
                     VLLNLLRGSGTDGMSGMEPVRPLNAAGKRMLARPLLAWAGRRDTEGLCRARGIDFRHD
                     EMNEDEAFARVRVRRQLLPMMRSFNPRITEALARTAELLRDDSRALDSAAQRLLELST
                     DNGAKRHHLRTDLIADAAPALRRRALRLWLEQRRGDLRRLELVHVRAVENLVTQNRGG
                     RTIELPGGSTVSRKSGLLTFTPRTSTDTKA"
     gene            1464..>2147
                     /locus_tag="VIT19_04270"
     CDS             1464..>2147
                     /locus_tag="VIT19_04270"
                     /inference="COORDINATES: protein motif:HMM:NF018218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HEY5838228.1"
                     /translation="MGDGGRKILSSTARQIIFWLLIVAGALLIYKLVNPGTKNTSPID
                     LTQLEQKIQQGQLSHLTVKQSETTAVEKNTGKTFVAQLTNEHTKAEILKEARQLDSSG
                     QAKVPNVQEEGSSSLWWPALYYLLPFLLIFGFWIFMLRQMQSGGNKALSFGKSRAKLL
                     SNQQKRVTFKDVAGVEEAKEELQEIIEFLKEPQKFQKLGGRIPKGVLMMGPPGTGKTL
                     LARAIAGEAN"
BASE COUNT          490 a          576 c          664 g          417 t
ORIGIN      
        1 ctcgcggcca gatgcacgag agttctgttt gcgtagatcg ctccggaggc gccggtgatg
       61 ccaacggtaa gttccatcgg gaaatcgatc ttacgtttgc tcggaagcgt tagcaaggag
      121 gttggccttc ggtacgcacg cctcgggcgt gcttgcggta cgcacacctc tggcctactt
      181 gcattcgatc agcatgccgg aggcatgcgt accaggaaac cgcggctgag gcgtcggttt
      241 tcgatgttag aattgccgca gatgaagaca aagcggaaac aggttggtcg agcggtcccc
      301 agtaaattgg ctcgcaagca gccgatcagc aagttcgctc gcgctctttt gcaggagtgg
      361 cgaagtctca atttgccgct ttcagacgca gtcgctgttg taggagtttc aggaggtgct
      421 gattcggtcg ccttgcttct ggcggccgac gaactaatca agggaagcaa gttgaatatc
      481 cggatcgtgg tcgcgcacct cgatcatcga ttgcggaagg aaagcggtga cgacgctcgc
      541 tgggtgaaag agctggcgac ccggctcggt cacgaggcgt caattaaacg agtgccggta
      601 aaaagtctag cgcgacgcgg cggcgacaat ctcgaacaag cggcacggct cgcccggtac
      661 aaatggtttg ccgaactggc gcaaaagcgc ggtgccaatt tcgtcttgac ggcacacacg
      721 atggacgatc aggcagaaac ggtgctgttg aatctcctgc gcgggagtgg aactgatggt
      781 atgagcggga tggagccggt gcgcccgctg aacgccgcgg gcaaaaggat gctggcgcgg
      841 ccgctgctcg cctgggccgg tcgtcgcgat acggaaggac tctgccgcgc tcgcggcatc
      901 gattttcgcc acgatgaaat gaacgaagac gaggcatttg cgcgagtccg cgtccggcga
      961 cagcttttgc caatgatgcg gagtttcaac ccgcgaatca ctgaagcgct ggcccgcacc
     1021 gccgaactcc tgcgagacga cagccgcgca ctggatagcg ccgcccaacg attgttagag
     1081 ctttcgacgg acaacggtgc gaagcggcat cacctacgga cggatttgat cgcggacgct
     1141 gctcccgcgc tgcggcgtcg cgccttgcgc ctttggttgg agcagcgacg cggagacttg
     1201 cgccggctgg agctggttca tgttcgcgcc gtcgagaatc tcgtgactca gaaccggggc
     1261 ggacgcacca tcgagctgcc gggcgggtcg acagtctccc gcaaaagcgg cctactgact
     1321 ttcaccccga gaacatccac ggacactaaa gcgtaacaac cacggcctat tcgggacacc
     1381 ggaggggaac aaattcgcat cctagaactc ttaaattcgg gaaatctgtt cggaagcgac
     1441 ttttataggt aacttacggt atcatgggcg acggaggcag gaagattttg agttccactg
     1501 cgagacaaat aattttttgg ttgctgattg tggcgggcgc gctgctcatc tataagctcg
     1561 tcaatccggg cacaaagaac acgagcccga tcgatctgac gcagcttgaa cagaagattc
     1621 agcaaggtca actgtcgcat ttaacggtga aacagtcgga aacgacggcc gttgagaaga
     1681 acaccggcaa gacctttgtg gcacagctta ccaacgagca cacaaaagca gagattctga
     1741 aagaggcgcg ccagctggac agcagcggac aggccaaagt tcccaatgtc caggaagagg
     1801 gaagttccag cctttggtgg ccggcccttt attacctgct gccgtttctg ctgattttcg
     1861 gtttctggat tttcatgctg cggcagatgc agtcgggcgg caacaaggcc ctttcgttcg
     1921 gcaagtcgcg tgcgaaactc ctcagcaatc aacagaaacg cgtgacgttc aaggacgtcg
     1981 ccggcgtgga agaagccaag gaagaacttc aggaaatcat tgaattcctg aaagaaccgc
     2041 agaagtttca gaagctcggc ggccgcattc ccaagggcgt tttgatgatg ggcccgccgg
     2101 gaacgggaaa gactttgctg gcgcgcgcaa ttgccggcga agcaaac
//
LOCUS       DATDBY010000227         2112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2383777, whole genome shotgun sequence.
ACCESSION   DATDBY010000227 DATDBY010000000
VERSION     DATDBY010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2383777"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1251)
                     /locus_tag="VIT19_04275"
     CDS             complement(37..1251)
                     /locus_tag="VIT19_04275"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5838229.1"
                     /translation="MRTARTINQPPRFRARVSDYLGLERNVSLASAAIFILGLGEELW
                     KKFLPKYLEALGASTPVIGLFGTAHDFFDAIYQYPGGWLADRVGRRRTFITLITAASA
                     GYLVYLFSPSWPFLFVGLALVMMWQSMGSPAIFAVIGDSLPRERRAMGFTVQSILKRV
                     PIVIAPLAGGLLIARLGIVKGIHVSLVITLVLAVVTLLLVRKITLTARASETTSIRGV
                     WQSFHTVLKRLLVSDVIIRTCEGMTGVLTILYVANVLNYSLAVYGTLVAIQMVTSIVV
                     YIPAGKIADRIGRKPFVIATFVSFALFPLAVIFASTFALLVVAFVIGGLREIGEPSRK
                     AMIVDFAQEGVRARSVGLYYLVRSLSITPAAAIGGLLWKIAPEVPFLVAGVIGLIGTV
                     VFALTVEERSAS"
     gene            complement(1359..>2112)
                     /locus_tag="VIT19_04280"
     CDS             complement(1359..>2112)
                     /locus_tag="VIT19_04280"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HEY5838230.1"
                     /translation="CFSVGLGDKRSTLEVRLLVFTGEYLDQHVLFDLDGTLTNPRLGI
                     TRCMRYALDCLSVACPSDDVLTSFIGPPLRGTFATLLGTPDRERIEEAMARYRERFAD
                     TGLFENEVYGGIPELLAQATEAGAQLFVATSKPTVFAERVLTHFSLRPYFAGVYGSEL
                     DGRFEDKADLLEHLIEAERIAAKEAVMVGDRAADVVAARANGVRSIGVLWGYGSDAEL
                     TDAGADRLCRTPSELGAMILSPASRAQKIYGT"
BASE COUNT          514 a          632 c          591 g          375 t
ORIGIN      
        1 tggtaaccgc caaactgctt ttctgcaaac atgacgctag ctcgcggatc gctcttcgac
       61 ggtcaaagca aagacaactg tcccgatcaa tccaatgact ccggctacga ggaatggtac
      121 ttcaggcgca atcttccaaa gtaacccgcc aatggcggcg gcgggagtaa tcgagaggct
      181 tctgaccaga taataaagac caaccgatct cgcgcgcaca ccctcttgag caaaatccac
      241 aatcatggcc ttgcgcgacg gctcgccgat ttcacgaaga ccaccgatta cgaaagcgac
      301 gaccagtaaa gcgaatgttg acgcgaagat cactgccaaa ggaaacagcg caaaacttac
      361 gaacgtggcg atgacgaaag gcttgcgccc gatgcgatcc gcaatcttgc cggcgggaat
      421 gtaaacaact atggacgtga ccatctgaat tgctacaagc gtcccataaa ccgccaggct
      481 gtaattcagc acgttcgcga cgtagagaat cgtcaacact cccgtcatgc cctcgcatgt
      541 ccgaatgatg acgtcggaaa ccagtaggcg cttgagtact gtatgaaagg attgccacac
      601 gccgcggatg ctggttgttt ccgacgcgcg ggcggtcaga gtgatctttc taaccagcag
      661 cagggttaca actgcaagga cgagagtaat caccagcgaa acgtgaatgc ctttgacgat
      721 cccaaggcga gcaatcagaa ggccaccggc cagaggcgcg attactatgg gcacgcgctt
      781 gaggatcgac tgaacggtga aacccatggc tcgccgttct cgtggcagcg aatctccgat
      841 gaccgcaaag atggcgggcg agcccatgct ctgccacatc atcaccagcg ccagtccgac
      901 aaacaggaag ggccaggatg ggctgaagag ataaaccaag tagccggccg aggccgctgt
      961 gattaaggtg ataaacgttc gtctgcggcc cactcgatcc gcgagccaac cgccgggata
     1021 ttgataaatc gcatcgaaaa aatcgtgcgc agtcccaaac aggccaatca ccggcgtact
     1081 ggcgcccagc gcttcgagat atttcggcag gaacttcttc cagagttctt cacccagccc
     1141 gaggatgaag atggccgccg aggcgagcga aacgtttcgc tccaggccga ggtagtcgga
     1201 gactctggcg cggaagcgtg gcggttggtt gatggtgcgt gccgtgcgaa taacgttaag
     1261 tcagcacaag gtcaatgtgg atgtttgctt caacgagccg cggagcggcg acagatttta
     1321 gccccgggtg agcgagcaaa gcgagcgtaa cccggggatc aggtcccata aattttctga
     1381 gcccgcgaag cgggcgacag aatcattgcg cccaattccg atggtgtgcg gcatagcctg
     1441 tcagcacccg catccgtaag ttcggcatcc gacccgtacc cccacaacac accgatcgac
     1501 cgcacgccat tggcccgcgc cgccaccaca tccgccgccc ggtcgcccac catcaccgcc
     1561 tccttcgcgg cgattctctc cgcctcgatc agatgctcaa gcaagtccgc tttgtcctcg
     1621 aaccgtccgt cgagttctga cccgtacact cctgcgaagt acggccgaag gctgaaatgc
     1681 gtgagcacac gctcggcaaa caccgtcggc ttcgaggtgg ccacaaacag ctgcgcgccg
     1741 gcttccgtcg cttgcgccag cagctccggg atgccgccgt acacttcgtt ctcgaacagc
     1801 cccgtgtcgg cgaaccgctc gcggtagcgt gccatggcct cctcgatgcg ttcccgatcg
     1861 ggcgtgccta ggagtgtggc gaaggtgccc cgaagcggcg ggccgataaa cgaggtcagg
     1921 acgtcgtcgg acgggcaggc gaccgagaga cagtcaagcg catacctcat gcaacgcgta
     1981 atgccgagtc gaggattcgt cagcgttcca tcgaggtcga aaagaacgtg ttggtccaga
     2041 tactctcctg taaaaacaag caatctaact tcaagagttg accgtttgtc accgaggccg
     2101 accgaaaaac aa
//
LOCUS       DATDBY010000228         2544 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1538059, whole genome shotgun sequence.
ACCESSION   DATDBY010000228 DATDBY010000000
VERSION     DATDBY010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2544
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1538059"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VIT19_04285"
     CDS             <1..301
                     /locus_tag="VIT19_04285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838231.1"
                     /translation="DKTSEIDIIKMRAPGGEKDVDPQATYRIVTIDYIVNRGGDISTL
                     LRQGKPAQPLGITLRDAIMAYVKSETAAGRTIRPNLDGRFWLDRTKSAVTEETRP"
     gene            350..1330
                     /locus_tag="VIT19_04290"
     CDS             350..1330
                     /locus_tag="VIT19_04290"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY5838232.1"
                     /translation="MPTRRDFIKTAAVAGISLPLVRTSSAFHPSNSSAALWAPLLEPA
                     QGETLITVLHTNDTHSQIDPIHDNDRTYPGRGGVARRATLVKRIRKENPNTLLLDGGD
                     VMQGTPYFNYYKGEVEYKAMTLIGYDAGTLGNHEFDNGVEPLAKALEHAKFDIISTNY
                     DVRGSLLEKKVKTHSVKVLSGVRVGLFGMGVSPKGLITDANFKPVQYLDPVRMARGVV
                     KLLREQEKCTLVLGMSHLGYYRNPTDPDDIGDTQVAAQVDGIDFIASGHTHTFMERPV
                     VQKSPNGGNTVIFQVGRSGINVGRVDFTVKDGKVTAHAGRLLDLRDESLA"
     gene            1518..2285
                     /gene="rpiB"
                     /locus_tag="VIT19_04295"
     CDS             1518..2285
                     /gene="rpiB"
                     /locus_tag="VIT19_04295"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF004051.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEY5838233.1"
                     /translation="MADDATRDRVRALVRDVLNKTMPDAVPSANAARANQITPSAPQS
                     PAVTRDESAKLVITEDDVRGLERGAVLRVAENARLTPLAADIVNDRGIELVRRVSRSG
                     PKQHKSVAVGADHGGYPMKEELKKFLTELGHRVHDFGTNSDSAVDYPDFAHAVARAVA
                     DGSAEVGIVIDGAGVGSAMTANKVPGVRAAACYSEEVARNSREHNGANVLTLGSKTIT
                     NDQMREIVRAWLSTDLTEDRHRKRVAKIEAIERQYQR"
BASE COUNT          577 a          739 c          764 g          464 t
ORIGIN      
        1 ggacaagacc agtgagatcg acatcataaa gatgcgggcg ccgggtggtg agaaggacgt
       61 cgatccgcaa gcgacttatc gcatcgtcac tatcgactac atcgtaaacc gcggcggcga
      121 catttcgacg ttgctgcggc aaggaaagcc cgctcaaccg ctgggcatca ccttgcgcga
      181 cgccatcatg gcctatgtga aatcagaaac cgccgccggc cgcacaatca gaccgaatct
      241 cgatggccgc ttctggctcg atcgtaccaa gtcggcggta accgaagaaa caagacctta
      301 gctttcagac cacctgccgc ggtgcgtggt tggacgtcga aataaaaaaa tgccaacgag
      361 aagagacttc attaaaacgg ccgccgtcgc gggaatctcc ctgccgctcg ttcgcacgtc
      421 ttcagctttt cacccaagca actcaagcgc agccctctgg gcgccgctgc ttgagccggc
      481 gcaaggtgag acgctgatca ccgtgctgca cacgaacgac acgcattcgc agatcgatcc
      541 gatccacgac aatgaccgga cctatcccgg caggggcggc gtggcgcgac gcgcgacgct
      601 cgtcaaacgc attcgcaaag aaaacccgaa cacgcttttg ctcgacggcg gcgatgtgat
      661 gcaggggacg ccctacttca actattacaa aggcgaagtc gaatacaagg cgatgacctt
      721 gattggctac gacgcgggca ctctcggcaa tcacgagttc gacaatggcg tcgagccgct
      781 ggctaaggct ttagagcatg cgaagtttga catcatctcg acgaactacg atgtgcgcgg
      841 cagcctgctt gagaagaagg ttaagacgca ctcggtgaag gtactcagcg gcgtacgagt
      901 cgggctgttc ggtatgggcg ttagtccaaa aggtttgatt accgacgcca acttcaaacc
      961 ggttcagtat ctggatccgg tgcgcatggc gcgcggggtg gtgaagcttc tccgcgagca
     1021 ggaaaagtgc accctggtcc tgggcatgtc gcatcttggt tactatagga acccgacgga
     1081 tcctgacgac attggcgata ctcaagtcgc cgcgcaagtc gacggcatcg atttcatcgc
     1141 cagcggccac acccacacgt tcatggagag gccggtcgtg caaaagagtc cgaacggcgg
     1201 caacacggtg atctttcagg tcggccgctc cggcatcaac gtcgggcgcg tcgactttac
     1261 ggtgaaggac ggaaaagtga ccgcgcacgc cgggcgcctg ttggatctgc gagacgagtc
     1321 gctggcgtag ttttgtcccg gagggacgtt tgagtgtagc ccagcgcttc agcgctggga
     1381 ctaaattctc ttattgaatc atcccgcaga gacaacaacg cagcgttgtt gtctctgcgg
     1441 gaaaaaggta gataggcccg tgaaacccag ccataaatgg ctgggctact ttcaaacgct
     1501 cctacggagc gaagccaatg gctgacgacg caaccagaga tcgagtaagg gcgctggtgc
     1561 gcgacgttct gaacaagaca atgccggatg cggtgccctc tgcaaacgcc gcccgcgcta
     1621 accaaataac gccgagtgcc ccacaaagtc ccgccgtcac tcgcgacgaa tcagccaaac
     1681 tcgtcattac tgaagacgat gttcgcggcc ttgagcgagg cgcggtgttg cgcgttgcgg
     1741 agaatgcgcg cctgacgccg ctcgcagccg acatcgtcaa tgaccgcgga attgaactgg
     1801 ttcgtcgcgt gtcccggagc ggtccgaaac aacacaagtc agttgcagtc ggggcggacc
     1861 acggcggcta tccgatgaaa gaggagctga agaagtttct caccgagctc ggtcaccggg
     1921 ttcacgactt cggcacgaat tcagacagcg cggttgacta tccggatttc gcgcacgctg
     1981 ttgcccgcgc agtggcggac ggttcggcgg aggtcggcat tgtgatcgac ggcgccggcg
     2041 ttggttccgc gatgactgcg aacaaagttc ccggggtgcg cgccgcggca tgttattcgg
     2101 aggaagtcgc gcgcaactcg cgcgagcaca acggcgcgaa cgtgctgacg ctcggcagca
     2161 agacaatcac gaatgatcaa atgcgagaga tcgtccgcgc ctggctctca accgatctca
     2221 ccgaagaccg ccaccgcaaa cgcgttgcca agattgaagc catcgagcgg cagtatcagc
     2281 ggtgatctcc cggggcagta gcccggccgt aagggagggc tctcatcggc ctgacgttcg
     2341 cgtgctaaaa tgctggcgga gccacgacca aacgcaatgt ccttttcaca caacggcgat
     2401 tttgagcaac tagtcgagca gatcaccgac gtcatctacg cgcgtctgaa cggtgagcac
     2461 tccgatcagg cgcagatgtg cggctgcacg tctgagtgct ttcatcgctg tcctgagcgc
     2521 atgcatcgtg tcgtcgatgc gggc
//
LOCUS       DATDBY010000229         2005 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2885322, whole genome shotgun sequence.
ACCESSION   DATDBY010000229 DATDBY010000000
VERSION     DATDBY010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2885322"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1981)
                     /locus_tag="VIT19_04300"
     CDS             complement(<1..1981)
                     /locus_tag="VIT19_04300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838234.1"
                     /translation="MASENGQIFDCRVQLGAVSEMRAGEGVPEVSFTVQAIPTEPLQS
                     ADKDQPGPLKITSLAMVADKLYVGTHSRGVLVIENGEAKEVVSRPRSFFINALETDAK
                     GRLWVGARGGKEESAIFDQSDPLKPVRANVSTGPVTAIARGAAEDIWVATDGRGAFHL
                     RDGKIIERFTFVGTGGALRSDHIYGVFVDQEDVVWFATDKGVCRYDPNAARTEAIAND
                     ANANYVRALWRTAKGSLLAGTNAGLFVHDAAESVWSPIADVGRRIIYAINEDNSGRVL
                     IGTSSGLLASSNRNELAFARVSPSSNNLPEGDSVRAIANVDGTTYIATYGYGVEKLNG
                     SQRTFVWPAPSADNRLREVTALGRDPTGRLVIGTATAGVFFWDGKEARTETALENLKG
                     DAVWSALADSDGLWLASARGLYFYKSGELRELAPGVHARALFPSADNSRAGQVWCATV
                     GNGLLRVSLDDQFGAVVSRFDIEQGLASQRVFGVVSTRGQNGSEQVIAATNRGVVRYQ
                     PSRGTPTVLPSRVIGQRIHQQNELAAGLHLDYPQNSLLLDVTAINSRTFPEQFQYAFA
                     LYDNTGKIIRQKLSHDSQFPMEQLSAGKYKVIARAFTKDLTPAVPLSFEFTVARAPFP
                     WTSTALGVLLLLALIALVWGYAQNRRIHRTSAELAG"
BASE COUNT          388 a          639 c          566 g          412 t
ORIGIN      
        1 cgcccgcgag ttccgcgctc gtccgatgaa tgcgccggtt ctgcgcgtaa ccccacacca
       61 gcgcaatcag cgccaacaac aggagaactc cgagcgccgt cgaggtccag gggaatggcg
      121 cgcgggcaac ggtaaattca aacgacagcg gaacagccgg cgtcagatct ttcgtaaagg
      181 cgcgcgcgat gactttgtat ttgcccgcgc tcaactgttc catcggaaac tgcgaatcgt
      241 gcgaaagctt ctggcggata atctttcccg tgttgtcgta cagagcgaac gcgtactgaa
      301 actgctcggg aaaagttcgg ctgttgatcg cagtgacatc gagcagcaaa ctgttctgcg
      361 gataatcgag atgcaacccg gccgcgagtt cgttctgctg atgaatcctt tgaccaatga
      421 cccgtgacgg cagaacggtt ggcgtgccgc gactgggttg atagcgaact acgccgcggt
      481 tcgtcgccgc gatcacttgt tcgctgccat tttggccgcg cgtactgacc acgccgaaca
      541 cacgctgcga ggccagtccc tgctcgatgt cgaaacgcga aacgacggcg ccgaattgat
      601 catccagcga gacgcgcagg agtccgttgc caactgtcgc gcaccagact tgtccggcgc
      661 gggaattgtc ggcactcgga aaaagagcgc gggcatgaac tccgggcgca agctcgcgca
      721 gctctcctga tttgtagaaa taaagcccac gcgcgctcgc cagccacagc ccatcactgt
      781 ccgccagcgc cgaccaaact gcgtcgcctt tcaggttttc cagcgctgtt tcggtacgtg
      841 cttctttgcc gtcccagaaa aaaactcccg ccgtggccgt tccgatcacg agccggccag
      901 tcgggtcgcg accgagcgcc gtcacttcgc gcagacgatt atcggccgac ggagccggcc
      961 acacgaacgt tcgctgtgaa ccgtttaact tctcgacgcc gtatccatac gtggcaatgt
     1021 aggtcgtgcc gtcaacgttc gcgatcgcgc gcacgctgtc accttcgggc aggttgttac
     1081 tcgatggcga cacgcgcgca aatgcgagtt cattgcgatt cgacgaagcc agcagaccgc
     1141 tggacgtgcc aatcaaaacg cgtcccgagt tgtcttcgtt gatggcgtaa ataattcgcc
     1201 ggccgacatc ggcaatcggg gaccaaacgc tttccgccgc gtcgtggacg aacagtccgg
     1261 catttgttcc ggccagcaaa ctcccttttg ccgtgcgcca aagcgcgcgg acgtaattcg
     1321 catttgcatc gttggcgatg gcttccgtcc gtgcggcgtt cggatcataa cggcagacgc
     1381 ctttgtcggt ggcgaaccag acgacgtcct cttgatccac gaacactccg taaatgtgat
     1441 ccgaccggag cgcgccgccc gtgccgacaa acgtgaaccg ctcgattatt ttgccgtcgc
     1501 gcagatggaa tgcgccgcgg ccgtcggtcg ccacccaaat atcttccgcg gcgccgcgcg
     1561 cgattgccgt aactggtccc gtcgaaacat ttgctcgcac cggtttgagc gggtcgcttt
     1621 gatcgaagat cgcgctttct tctttcccgc cgcgcgcacc cacccacaga cgtcccttcg
     1681 catccgtttc cagcgcgtta atgaaaaagc tgcgcggcct gcttactact tcctttgcct
     1741 cgccgttttc gatcaccagc acacctcggc tgtgcgtgcc cacgtacagc ttgtcggcaa
     1801 ccatcgcgag gctggtgatt ttcagtggcc cgggctgatc tttgtcggcg ctttggagtg
     1861 gttcagtggg aattgcctgc acggtaaagc tgacttccgg aactccctcg ccggcccgca
     1921 tctcgctcac cgcaccaagc tgtacacggc aatcaaagat ctggccattc tcgctcgcca
     1981 tcaagacgtg gtcgcggtcg cgggt
//
LOCUS       DATDBY010000230         2969 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2679202, whole genome shotgun sequence.
ACCESSION   DATDBY010000230 DATDBY010000000
VERSION     DATDBY010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2969
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2679202"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..837
                     /locus_tag="VIT19_04305"
     CDS             <1..837
                     /locus_tag="VIT19_04305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838235.1"
                     /translation="QLFGAAYYPGLVREGEPASGERQAFVPGIFGNIFDVLVASDTQK
                     EAIHNYRAVVVGGEVNWTKGWPERLADYVRKGGVVVLNAAQVKGLPEGLLGIRMSTAT
                     AEADNAKCALDAQTDLSGQMFRYERVSPTSAQVLLTAPNGDPLVTSNKIGRGRVIFVA
                     VPDLLGEDERMTPFAAHLLAHVFSEATPVRVEGDVEYLVNRNANGWVVTLFNDSGVFK
                     PQQGLAQVDRSAVANVVVGLRNQKVTTATEWLTNSKLTLKEGANVQITIPAGGIAIVE
                     LK"
     gene            996..1298
                     /locus_tag="VIT19_04310"
     CDS             996..1298
                     /locus_tag="VIT19_04310"
                     /inference="COORDINATES: protein motif:HMM:NF012911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEY5838236.1"
                     /translation="MQFDVSTNPGKVARRFLISGDVQGVGYRFFAQRAAARHQVVGYV
                     KNLSGGRVDALVEGSPTQVEAFKHDLAAGPRFGRVEDVEELNLDPTGTYSAFRIEH"
     gene            1315..2226
                     /locus_tag="VIT19_04315"
     CDS             1315..2226
                     /locus_tag="VIT19_04315"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY5838237.1"
                     /translation="MSDAPTLVLEHVTKKFGDFTAVDDLSVQVHRGRVFGLIGPNGAG
                     KTTTIRMIVNITVPDSGRVALFGQPMSTALQDRIGYLPEERGLYKRMKVGEQLRFFAE
                     LKDLRGKEADTRIDYWLAKLQLKDWKEKRTKELSKGMQQKVQFITSVIHDPDLLILDE
                     PFSGLDPVNVEIMKDTILELKQANKTIILSTHQMEIAEKLCDDVCMINRSRKVLDGTL
                     RDIRRSFSRNAVALRFEGDEGLLKDSELVANVIPVGDELEVLLAPGVSHQTLLKRLID
                     SQIVVTKFELVEPRLHEIFIEKVKETA"
     gene            2223..>2969
                     /locus_tag="VIT19_04320"
     CDS             2223..>2969
                     /locus_tag="VIT19_04320"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5838238.1"
                     /translation="MRKFFAVVKREYIQRVRTKFFVIATILGPLIMAGVAVVPALMFG
                     IRSGGPTRLAIVDQTGRVYERVARELAIDRRAAPTPSPKPEQPPGLNNDPRDRAKQSG
                     NMMQSHFAVEEVKMNGRSLEDVRKELDVRVSRKELDGYIILPPGLLKDEQPEFSARNT
                     ADVFTQSRVENSINRALRSQRMVENGIDEEQIERMSEPVSLKTTGIGGKEGAGESSFF
                     LVFGLGLLIYMSVLMYGQFVLGAVIEEKETR"
BASE COUNT          674 a          772 c          899 g          624 t
ORIGIN      
        1 caattgttcg gcgcggcgta ctacccggga ctcgtgcgcg aaggcgagcc ggccagcggc
       61 gagcgacagg cgtttgtgcc gggtatcttt gggaacattt tcgacgtcct ggttgcatcc
      121 gacacgcaga aagaggcgat ccacaattac cgtgcagttg tcgtcggcgg tgaagtgaac
      181 tggacaaagg ggtggcctga gcggctcgct gactacgttc gaaaaggtgg tgtcgtcgtg
      241 ctgaacgccg ctcaggtcaa aggactgcct gagggccttc tgggcatacg aatgagcact
      301 gcgactgccg aagctgataa cgcgaagtgc gccctcgacg cgcagacgga tctgagtgga
      361 cagatgtttc gttacgaacg agtcagcccc accagcgccc aggtgctttt gaccgcgcct
      421 aacggggatc cactagtgac gtcgaacaag attggtcgcg gtcgggttat cttcgtggcg
      481 gtgccggact tgctgggcga ggacgaaaga atgacgccgt tcgcggcgca tcttctggcg
      541 cacgtgtttt ccgaggcgac gccggtgcga gtcgaaggcg acgttgaata tctcgtcaat
      601 cgaaatgcga acggctgggt cgtgacgctc ttcaatgaca gcggcgtttt caagccgcaa
      661 cagggtctgg cgcaggttga tcgatcggcg gtggcgaacg ttgttgttgg tttgcgaaat
      721 caaaaagtca ctaccgcgac tgagtggctg accaattcga agcttacttt gaaagagggc
      781 gcgaacgtcc agatcaccat tccggctggt ggtatcgcga tcgtggaact taagtgaggg
      841 agcgcacgca tcctgcgtgc gggaccccgg catcttgccg ggagaaacgg cgagcaagat
      901 gctcgcgaac cgcaggcagg atgcctgcgc tccagtccgc tagactatcg cagccaattt
      961 tgcagtaata gtgaagacta acccggagtt tcgaaatgca gtttgatgtc tcgacaaatc
     1021 ctggcaaggt agcccgacgc ttcttgatca gcggcgatgt gcagggcgtc ggctatcgct
     1081 tcttcgccca gcgcgcggca gcacggcatc aggtcgtggg ctatgtgaag aacctctctg
     1141 gtggccgcgt agatgccctc gtcgaaggtt cgccgacaca agttgaagct ttcaagcacg
     1201 acctcgcggc cggcccgcgt tttggtcgcg ttgaggacgt tgaagaacta aatctcgatc
     1261 cgacgggcac ttattcggcg ttccgcatcg agcattgatt tcaggaattt cttcatgagc
     1321 gacgcaccta ccctcgttct cgaacacgtc acgaaaaaat tcggcgactt caccgcggtt
     1381 gacgatctta gtgtgcaagt gcaccgcggc cgagtgttcg gcctgatcgg cccgaacggc
     1441 gccggcaaga cgacgacaat tcggatgatc gtcaacatca ccgtgccgga ttccggtcgc
     1501 gtcgcgttgt ttgggcagcc tatgtccaca gcgttgcaag atcgcattgg ctacttgccg
     1561 gaagagcgcg gcctttacaa aaggatgaag gttggcgagc agctgcgttt ctttgccgaa
     1621 cttaaggatc ttcgcggcaa ggaagccgac acgcgaatcg actattggct tgctaagttg
     1681 cagctaaaag attggaaaga gaagcggacc aaggagcttt ccaagggcat gcagcagaag
     1741 gtccaattta tcacttcggt aattcacgat ccggatctgc tgattctgga tgagccgttt
     1801 tccgggctcg atccggtaaa cgtcgagatc atgaaggaca cgatccttga gctgaagcag
     1861 gcgaacaaga cgattattct ttcgactcat caaatggaaa tcgcggagaa gctctgtgac
     1921 gacgtctgca tgatcaatcg gtcgcgcaaa gtgcttgacg gaacgctgcg cgacatccgg
     1981 cgaagtttct cgcgcaatgc tgtggctttg cggtttgaag gtgatgaagg gttactcaag
     2041 gactcggaac tggttgcgaa cgtaatcccg gtcggtgacg agttagaagt actactcgcg
     2101 cccggggtca gtcaccaaac tctgttaaag cgtctaatcg actcgcaaat agtcgtcacg
     2161 aaattcgaat tagttgagcc ccggctgcac gagattttca ttgaaaaggt gaaggaaacc
     2221 gcatgagaaa attcttcgcc gttgtcaaac gcgaatacat tcagcgggtt cggaccaagt
     2281 tcttcgtgat cgcgacgatc ctcggcccgc taatcatggc tggagttgcc gtcgtgcctg
     2341 ccttgatgtt tggcatcagg tccggggggc ccacccgtct cgcgattgtc gatcaaaccg
     2401 gcagggtcta cgagcgcgtg gctcgagagt tggcgatcga tcgacgagcc gccccgactc
     2461 ccagcccaaa accggaacag cctcctggtc tcaataacga tcccagggac cgcgcgaagc
     2521 aaagcggcaa catgatgcag tcccacttcg cggtggaaga agtaaagatg aatggccgct
     2581 cgcttgaaga tgttcgcaaa gagctggacg tcagagtcag ccgcaaagaa ctcgatgggt
     2641 acatcatcct tccgccgggt ttgcttaagg atgagcagcc cgaattcagt gcccggaaca
     2701 cggccgacgt tttcacccag tcgagagttg agaattcaat caaccgggcc ctgcgttcgc
     2761 aacgcatggt cgaaaacggc atcgatgaag aacagatcga aagaatgtcc gagccggtga
     2821 gtctgaaaac aaccggaatc ggtggtaagg aaggcgcagg cgagtcaagc tttttcctgg
     2881 tcttcgggtt ggggcttttg atctacatga gcgtcctgat gtacgggcaa ttcgtgctgg
     2941 gcgccgtgat cgaagagaaa gaaacccgg
//
LOCUS       DATDBY010000231         2150 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2698087, whole genome shotgun sequence.
ACCESSION   DATDBY010000231 DATDBY010000000
VERSION     DATDBY010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2698087"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            615..>2150
                     /locus_tag="VIT19_04325"
     CDS             615..>2150
                     /locus_tag="VIT19_04325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838239.1"
                     /translation="MITISPDELTNRAFQLAYFLHCERVTAVEIAARALNKLQLAATA
                     QGKRLYYRLTGRADARKARSKVSMGEPHLLQRLIYVESEEFERRKEAAALNPQSKTET
                     KLARRSDLVVFFIKHLVRITTRRNSFYVTLGLGRLLYNYTTPETMELYNLVIQDPDRV
                     HDDYYYRSRKGVLLKELKERFGELIEIMKGPRGEQRWRTGESNSLQAELVRECLTWFT
                     PWSTPCVVPERFDPLSDPIAKLTFAGRRPDDEHEVEVNRIHAALHPDCFARLAAANGL
                     TTPDERLELPHFFLADANDDSDQNSRTPPNLSEEDLNTINNLLAQEAGRRKAASSGFL
                     RVLVDGAQMAEINSQRSPSAQFAIPEEAEVVEVYGQDEQGPLLLATHLLNFNGAKSRN
                     FTITAEGGQRITFKVQLVRDDNGSTSGAQLAVTYARSGVEGTTAKLNQISTSMLNAGR
                     DLISAGWWKPAAAFSALVLLFAGAWWVWSDRPKQNSVVNVTPTPAPSIPAMVTPAPPK
                     SNEV"
BASE COUNT          493 a          578 c          598 g          481 t
ORIGIN      
        1 aggtcgtcga gatacttccc aatgactcgc tcttcatttg aagtctctgc accaggcgtc
       61 gcgctgtccg gcaccgacgg ctggtttgtt gccgttgtcg atcgcaagga tgcgacaacc
      121 gctatcgcta agaggccaac catcacgccc aatttcaatt tcgtcctctt catttctgtt
      181 ctccttgtct ttagttgttg tacttcgtgg cttcgcggac tgttcgtccg cggcctcctg
      241 gttgagtggg cgcactttat atgcgaggga aaggtcgggc tgtgtcattt ccggaattcc
      301 gaaaatgcca cggtcgagtt agagccggac ggggatgatg tggtcgaaat gaagagcgaa
      361 agcaggttca gtcgcgaaat taaatgaaac ctcattaaca cctcacttca gtgaggtgtg
      421 caggcgaatg tgcctgcccg gtaaccgttg gctatcatgc agtccgtggt caccttactg
      481 aggtgttaat gaaattcaac ctgaatcgca cccagaaaac ttgcggcttt ggggccgcgt
      541 gcagatacta gccgctctta ttgagagtca taccctcctg cacccggctc taaggaagag
      601 agcagtcgaa gaggatgatc accatctctc cagatgagtt aaccaaccgg gcctttcaac
      661 tagcctattt cctgcactgc gagcgggtga cggcggtaga gatcgcggcg cgcgcgctta
      721 acaagctgca actggctgcg accgcgcagg gtaagcgtct gtactatcgc ctcacaggcc
      781 gggcagatgc tcgaaaagcc cgcagcaagg tttcgatggg agagcctcac ctactgcagc
      841 gtttgattta tgttgagtct gaagaatttg aacgccgcaa agaagcagca gcgctaaatc
      901 cacagtccaa aaccgaaacg aagctggctc gccgttccga cctggtagtg tttttcatca
      961 agcatctggt gcgcatcacg accagacgca actcgttcta tgtaacgttg ggcttggggc
     1021 gtttacttta caactacacg acgcctgaga cgatggagct ttacaacctg gttatccagg
     1081 accccgatcg ggtccacgat gattactact atcggtcacg aaagggcgtc ctgttgaagg
     1141 agctcaaaga acgctttggt gaacttattg aaataatgaa aggcccgcgc ggtgaacaac
     1201 gatggcgaac cggcgaaagt aattcacttc aggccgagct ggtgcgcgaa tgtctgacgt
     1261 ggtttacgcc atggtcaacg ccctgcgtgg tgcccgaacg atttgacccc ttgagcgatc
     1321 cgattgcgaa actaactttt gcaggccgtc gtcctgacga cgaacatgag gttgaagtga
     1381 atcgaataca tgccgcactg catcccgact gtttcgctcg tctggccgca gccaatggtt
     1441 tgacaacacc tgacgagcga ctggaattgc cgcacttctt cctggccgat gcgaatgacg
     1501 actcagatca gaattcgcgg acaccgccga atctgtctga ggaagacttg aacactatca
     1561 acaatctgtt ggcgcaggag gccggccggc gaaaggctgc gtcgtccggt tttctgcgcg
     1621 tgctggttga tggggctcag atggcggaga ttaatagcca gcgttcgccg tcagcccagt
     1681 tcgcgatacc cgaggaagcg gaagtcgttg aggtctatgg ccaggatgaa caaggcccgc
     1741 tcctcctggc cactcactta ttgaatttca acggcgctaa aagccgcaac ttcacgatca
     1801 ccgcggaagg cggccagcga ataactttca aggtccaatt agttcgcgat gacaacggat
     1861 caaccagcgg ggcgcaattg gccgtgactt atgcacgaag tggcgttgaa ggtacgactg
     1921 cgaaacttaa tcagatttca acttcgatgc tcaatgccgg tcgggatcta atttcggcag
     1981 gctggtggaa acccgccgcg gcattctctg ccctcgtgct cttattcgca ggcgcctggt
     2041 gggtgtggag tgatcgtccg aaacagaaca gcgtggtaaa cgtgacgcca accccggccc
     2101 catctatccc cgcgatggtg acgccggcgc cgccaaagag caacgaagtg
//
LOCUS       DATDBY010000232         2099 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1860361, whole genome shotgun sequence.
ACCESSION   DATDBY010000232 DATDBY010000000
VERSION     DATDBY010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1860361"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..556)
                     /locus_tag="VIT19_04330"
     CDS             complement(<1..556)
                     /locus_tag="VIT19_04330"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEY5838240.1"
                     /translation="MITKLNLSSTPFRNRALPWTVTAIVTLFSVIALVFIARWTFDTN
                     AQAQAAGRDVAQLRQQADGLNKRAEEIRSTLTAEQKQALKSAHTLVDRKQFSWSRLFA
                     DLESALPASVRVTRITVKGVRSQDARIVTNLELVVASKNATTVTQMIEEMERQGIFHA
                     ELVSQDPERGRGESGQEYTMNVFYA"
     gene            complement(683..>2099)
                     /locus_tag="VIT19_04335"
     CDS             complement(683..>2099)
                     /locus_tag="VIT19_04335"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY5838241.1"
                     /translation="LGLLFAILGARALVTLVTNDIPRLKDFGFDKWALLFTLGTSIVT
                     ALVFGLAPAIDASKVNLNESLKEGGRSSGGGSARNKLRSALVIAEVALAVVLVTACGL
                     MFRSFLQLQRVNPGFNAANLVTLEIELPEASYQADQQQRNFQQQLLQKIRTVPGVVNA
                     ATVDNLPFSGNAFNSSFIVEGRPIPAATERPRAYYRVVSSDYFSTMGIPMVRGNPFSD
                     RDTADVPGVAVINDVAGRKFWPGEDPLGKKIKRGRPESKNPWVTIVGIVGSGAQNSLD
                     DPAQAEIYTPYLQNTSGTFTLVTRTGTDARTLAPLIRKEVWATDKDLPVSNMKLMDEL
                     ISNSVAQPRFYVILLSVFAGLALVLAAVGVYGVMSYSVLLRTRDIGIRMALGARPIDI
                     FKHVLTQALVLALIGLGIGLVLAVTSTRVLSSMLYGISPTDPITLAATALVLLLVALL
                     ASYLPARRATKVDPMVTLRYE"
BASE COUNT          451 a          621 c          604 g          423 t
ORIGIN      
        1 gagcgtagaa aacattcatc gtgtattcct ggcctgactc gcctctacca cgttcgggat
       61 cctgcgaaac gagttccgca tgaaagatgc cctggcgctc catctcttca atcatctgag
      121 tgaccgtcgt ggcgttcttg ctggctacga ccagctcaag attggttacg atgcgagcgt
      181 cctgagagcg cacgcccttc acggtaattc gcgtcacgcg cacgctcgcg ggcagagcgc
      241 tttcgagatc cgcaaacaaa cgcgaccacg agaactgctt tcggtccacg agcgtgtgtg
      301 ccgacttcag cgcctgtttc tgctccgcag tgagtgtgct cctaatctct tcggcgcgtt
      361 tgtttagccc gtcagcctgt tggcgcaact gcgccacgtc acggccggcg gcctgagcct
      421 gggcgttggt gtcgaaagtc catctggcga tgaacaccaa cgcgatgact gagaacagcg
      481 tcacgatcgc ggtcaccgtc cacggcaacg cgcggttgcg aaaaggggta ctcgagagat
      541 ttagcttagt aatcacaaca aactttcacg aaaaggatac acgccgcgcg taaaaccgcg
      601 caaacggctg gcgcttcacc ttacacgttc ggaactggcc acaggttcgg aaaagctgcg
      661 atcttcgccg tgttagatgc gcttattcgt atctgagtgt gaccatcgga tcgactttcg
      721 tcgctcggcg ggccgggaga tagctcgcga gcagcgccac gagcagcaac accagagccg
      781 ttgctgccag cgtgattgga tcggtgggac tgatgccgta aagcatgctg ctcaaaacgc
      841 gtgttgaggt cactgccaga accaggccga tgccgagacc aatcaaggcg agaaccagcg
      901 cctgggtgag cacgtgcttg aaaatatcga tcgggcgagc gcccagcgcc atgcgaatac
      961 cgatgtcgcg ggtgcgcagc agcactgaat aagacatgac cccgtaaacg cccaccgccg
     1021 ccagcaccag cgccagtccg gcgaaaacac ttagcaggat gacgtagaag cggggttgcg
     1081 cgaccgaatt ggaaatcaat tcatccatca gcttcatgtt cgaaacggga aggtctttgt
     1141 cggtcgccca aacttctttt cggatcaagg gtgccagagt acgcgcgtcg gtgccggtgc
     1201 gcgtcacgag cgtgaacgtg ccgctggtgt tttgaagata cggagtgtag atctcggcct
     1261 gcgcggggtc gtccagcgag ttctgcgcgc ccgaaccgac gatgccaacg atcgttaccc
     1321 atgggttctt tgactcaggc cggccgcgct tgatcttctt ccccagggga tcttcgcccg
     1381 gccagaattt acgcccggcg acatcattga tcaccgcaac acccggcacg tcggccgtgt
     1441 cgcgatcgct gaacggatta ccgcggacca tcgggatgcc catggtggaa aaataatccg
     1501 aacttacgac tcgatagtac gcgcgcggtc tttctgtcgc tgccggaatt ggccgtcctt
     1561 cgacaatgaa gctcgaatta aaggcgttac cgctaaacgg aagattgtcc actgtggcgg
     1621 cgttcacgac gccgggcacc gtgcggatct tttgcagcaa ctgctgttga aaattccttt
     1681 gctgctgatc ggcctggtag ctcgcttccg gcagttcaat ttcgagggtc acgagatttg
     1741 ccgcattgaa tcccggattc acgcgttgca gctgcagaaa actccggaac atcaagccgc
     1801 acgcagtgac caacacaacc gcgagcgcga cctcagcgat taccagcgcg ctgcgaagtt
     1861 tgttgcgcgc cgagccgccg cccgagctgc gtccgccttc cttgagcgat tcgttcaagt
     1921 tcacctttga ggcatcgatc gccggtgcca gaccaaatac caatgccgtg acgatggaag
     1981 tgccgagcgt gaagagcagc gcccacttgt cgaatccgaa atcctttagc cggggaatgt
     2041 cgttagtgac cagagtaacc agggcgcgcg cgcccagaat cgcgaacagt agtcccagc
//
LOCUS       DATDBY010000233         2946 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1848398, whole genome shotgun sequence.
ACCESSION   DATDBY010000233 DATDBY010000000
VERSION     DATDBY010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2946
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1848398"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..547
                     /locus_tag="VIT19_04340"
     CDS             <1..547
                     /locus_tag="VIT19_04340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838242.1"
                     /translation="LLAAAIPMHWIALMTPMPAKPIALVAILTIYHNLQYHRLIWFHN
                     QKYVFRPSPQAERGWGEVEPRANPTPTLPARGEGEERERQARGVGTAVPDYGPAAFIS
                     RRLIIYIALGIIFGIIYQGPRQYFGYLNLHTGDSPAALSLPIQLGIAFLWGYAFIHYY
                     LDSKIWRVRRDPSVGKALKMA"
     gene            complement(564..1583)
                     /locus_tag="VIT19_04345"
     CDS             complement(564..1583)
                     /locus_tag="VIT19_04345"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY5838243.1"
                     /translation="MKKRYLLAGLTGVAAGAIATKLLTRPRDVSWPESIKLIPHPEHS
                     WFTRINGVRVHYQEAGDEDAPAIVLIHGFISSTLIWSDVFLPLAEAGFRVIAIDMPGY
                     GYSDKPADGQYTIAWQAHTIVSLLDRLEIDTATIVGASYGGAVAATIALDYPERVERL
                     VLVGTVSNDNIRREPMVRIACLPLIGDVVTPLYLGSRWVLRKRVEDTCRRTGVPVDEQ
                     KLAARHHVLATANAHRAMVRSMRRWSAERVSREANTIRMSTLIVWGEADSHVPLSDGV
                     RLRDRIPGARLIVFRNCGHLPPAEQPEKFVQVVTQFCNTAELQNATPLKFKRNKSVPP
                     AVAGD"
     gene            complement(1821..2873)
                     /locus_tag="VIT19_04350"
     CDS             complement(1821..2873)
                     /locus_tag="VIT19_04350"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: protein motif:HMM:NF013660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEY5838244.1"
                     /translation="MDGVLIIDKPAGMTSHDVVARVRRIIGERRVGHTGTLDPFATGV
                     LVMLVGRATRLAQFLSGAEKEYEAVIRLGYATDTGDVTGARLVSSSARARVISPSPHA
                     ERGAGGEVGDNAQPHPQSLPTRGEGSIPDVAEIAAAMALLTGEIEQVPPMYSAKKIAG
                     RKLYEHARRGEEIERQPVRVTISEFELLTQGEWETNEDGTVDLSARVVCSAGTYIRTL
                     AEDLGKRLGIGAHLAELRRTLAGRFAIENAVTLEELEDLGLNEAVKNILITPNNALSH
                     LPDFEVREDDETRLLNGIDLTVEAATTGTWADEQAIRLRNGDELLAVGFYERGKGVVH
                     PQVVIKQKDAGVNHPS"
BASE COUNT          587 a          913 c          822 g          624 t
ORIGIN      
        1 gttactggcg gcggcgatac cgatgcattg gattgctttg atgactccga tgccggcgaa
       61 accgattgcg ctcgtggcga ttctcaccat ctatcacaac ctgcaatatc accggctgat
      121 ttggtttcat aaccagaagt acgtctttcg cccctctccg caagcggaga ggggttgggg
      181 agaggttgag ccacgcgcta accccacccc aaccctcccc gcacgcgggg agggggaaga
      241 gcgcgaacgg caggcccgag gcgtcgggac tgcggtaccg gattacggcc cggccgcatt
      301 catcagccgg cgcctgatca tctacatcgc gctcggaatc atcttcggca tcatctacca
      361 gggcccacgc caatacttcg gctacctgaa tcttcacacc ggcgactcac cggccgcgct
      421 gtccctgccc attcaactgg gcatcgcctt tctgtggggc tacgccttta ttcactacta
      481 tctggattcg aaaatttggc gggtgcgcag agatccctcg gtgggcaagg cacttaagat
      541 ggcttgacgc cgcggttacc caatcaatca cccgctaccg caggtggtac tgacttgttc
      601 cgtttgaact tcagaggcgt cgcgttttga agttccgcgg tgttgcagaa ctgcgtaacc
      661 acttgcacaa acttctcagg ctgttccgcg ggcggcagat gaccgcagtt tcggaagacg
      721 atcaaacgcg cgcccggaat tcgatcgcgc agccgaacgc cgtcgctgag cggcacgtgc
      781 gagtctgctt caccccaaac aatcagcgtg gacatgcgaa tcgtattcgc ttcgcgtgag
      841 acgcgttcgg cactccagcg ccgcatcgac cggaccatcg cgcgatgcgc gttcgccgtc
      901 gcgagaacgt gatgccgcgc ggccagcttc tgttcatcca ccggcacgcc ggttcgccgg
      961 cacgtgtctt caactcgctt tcgcagcacc catcgcgatc ccaagtacag cggcgtcacc
     1021 acgtctccga tcagcggcag acacgcgatc cgcaccatgg gctctctgcg aatgttgtcg
     1081 ttgctgacag ttcccaccag cacgagacgt tcgactcgtt ccggataatc aagcgcaatt
     1141 gtcgctgcca ccgcgccgcc atacgacgcg ccgacgatcg tcgctgtgtc gatctccagg
     1201 cgatcgagca ggctgacaat ggtgtgtgcc tgccaggcga tcgtgtattg cccatcagcc
     1261 ggtttatccg agtagccata gccgggcatg tcgatcgcaa tcacgcgaaa gccggcctca
     1321 gccaggggca ggaacacgtc actccaaatg agcgtggaag agatgaagcc atgaatcagc
     1381 actatcgccg gcgcgtcttc gtcgccggct tcctgatagt ggacgcgtac gccgttaatc
     1441 cgagtgaacc aggaatgctc cggatgcggg atcagtttga tactttccgg ccaactgaca
     1501 tctcgcggcc gagtgagaag ttttgtggcg atcgcgcctg cggcgacgcc cgtcagtccg
     1561 gcaagtagat aacgtttctt catcaggggt gccaatgtta acccgcgtta cgccgagatc
     1621 gaaagtggtc tcggtgggca tctcattaac acctggcttc agccaggtgg cggcgaatag
     1681 aagagagagt gaaaccgttt ccaacggttt ccagttaagc cgttgaaacg gctattgacg
     1741 acgcatggag catggcgatc acctcgctga agcgaggtgt gaatgagatt cagccaggaa
     1801 caacacagaa aacctcatag tcaggaaggg tggtttaccc ccgcatcctt ctgtttgatc
     1861 acaacctgcg gatgaacgac gcctttgccg cgttcgtaga aaccgacggc cagcaactca
     1921 tcaccatttc taagtctgat tgcctgttca tcagcccacg tgccggtggt cgcggcttcg
     1981 actgtcagat cgattccatt cagaagccgc gtctcatcat cctcgcggac ttcgaagtcc
     2041 ggcaaatgcg aaagcgcatt gttgggtgtg atcagtatgt tctttaccgc ttcgttgagt
     2101 ccaaggtctt cgagctcttc aagtgtcacc gcattctcga tcgcgaaccg gcccgcgagg
     2161 gtgcgacgca actcagccag atgggcgccg atgccgagtc gcttacctaa atcctccgcg
     2221 agcgttctga tgtacgtgcc cgcggaacag acaacccgcg cgctcagatc caccgtgccg
     2281 tcctcgttag tttcccactc accctgggtc agcagttcga attcggaaat ggtcacgcgc
     2341 acgggttggc gctcaatttc ttcaccgcgc cgcgcatgtt catagagttt tcgaccggca
     2401 atttttttcg ctgagtacat tggcgggact tgttcgatct cgcccgtcag caaagccatc
     2461 gccgcggcaa tttccgcaac gtccggaatg cttccctccc cacgagtggg gagggattga
     2521 gggtggggtt gcgcgttgtc gccaacctct ccccctgccc ccctctccgc atgcggagag
     2581 ggggaaatga cccgcgctcg cgcagaggag gaaacaagcc gcgcgcccgt gacgtcgccg
     2641 gtgtcggtcg cgtatcccag ccgaatcact gcttcgtatt ccttttccgc gccgctgaga
     2701 aactgcgcca gccgcgttgc gcgtccgacc agcatcacga gaactccagt ggcaaacgga
     2761 tccaacgtgc cggtgtggcc gacgcgccgc tcgccgatga ttcgacgcac gcgcgcaacg
     2821 acatcgtgcg aggtcatccc cgcgggctta tcgatgatta gcacaccgtc cattgaccga
     2881 ttgtagtttc tccgtcccgt agggacgaaa tgtttataga acctaacgtc tttttctgtt
     2941 tacatg
//
LOCUS       DATDBY010000234         2567 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_915876, whole genome shotgun sequence.
ACCESSION   DATDBY010000234 DATDBY010000000
VERSION     DATDBY010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2567
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_915876"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2567
                     /locus_tag="VIT19_04355"
     CDS             <1..>2567
                     /locus_tag="VIT19_04355"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEY5838245.1"
                     /translation="GMAAPIYIANLGDSSIEKIPRTDSNDFSPMWPAGDARKVYFLSD
                     RDGTITLFAYDTVSKRISEAIENDGLDIKSASASADAIVYEQFGSLNIYDLKSGKTKR
                     VPVTINADIPSVRAKFEKVADRILNASLSPTGARALFEARGEIITVPAEKGDVRNLTN
                     TTGVADRDPTWSPDGKWIAYFSDESGEYALHLRQQSGMGEVKKIALGNPPSFFYGPIW
                     SPDSKKVAFTDKRLNLWYVDLDKGTPIKVDTSRRGAGFNASWSPDSRWLAYTRPVESW
                     YSAVFIYSLEEAKTRQVTDGLSDASWATFDKNGKHLYFMASTDIGPKLSGFDMSGYPH
                     QPTRSAYVVVLKKTDPSPLAPESDEEKTGEEKKPEAPGDKPAESEQKADPAAPAAAAK
                     PGAKPDDKKAPPKVTIDFERADQRVLALPIPARNLIAMATGKANTIFLLEALPPAPGV
                     TGVTLHKFDMEKRKFEKVLDGVRSFDLSANGEKMLFRQADNWFIVSTTQPIKPGEGKI
                     KTEDIEVYVDPKAEWHQMYREAWRIQRDFFYDPNHHGLDLKAAAKKYEPYLNALTHRA
                     DLSYLFQEMFGELTVGHLNVGGGDMPDPKRVPGGLLGANYAIENGRYRFAKIFDGENW
                     NPQLRAPLTQPGVNVQEGEYLLAVNGRNLTANDNIHSYFQNTANKQIVIRVGSKPDGA
                     GSREVTVVPVPNEGGLRTLAWIEGNRRKVDKMTGGKLAYVWLPDTAGGGYTNFNRYYF
                     AQLHKQGAVIDERFNGGGHAADYIIDYLQKPLNSYWAVRDGDDFRQPFGTLPGPKAMI
                     INEYAGSGGDLLPWMFRRHSIGPLIGKRTWGGLVGIGGYPVLIDGGSVTAPHFAFYSP
                     "
BASE COUNT          584 a          759 c          742 g          482 t
ORIGIN      
        1 ggcatggccg ctcccattta cattgctaac ctgggcgatt cgagcattga aaagattccg
       61 cgcactgact caaacgactt tagcccgatg tggcccgcag gtgatgcccg caaggtctat
      121 ttcctgtctg accgcgacgg aactattacg ctctttgcgt acgacactgt ttcgaaaaga
      181 atatcggaag caattgagaa cgacggctta gacattaagt ccgcgtcggc atccgctgat
      241 gcgatcgtct acgagcagtt cgggtcgctc aatatttacg atctaaagtc gggcaagaca
      301 aagcgtgtcc ccgtcacgat caacgccgat atcccgtcag tccgggcgaa gttcgagaag
      361 gttgccgacc gcatcctgaa tgcctccctt tctccgaccg gcgcgcgcgc tctctttgaa
      421 gcgcgtggcg aaatcatcac cgtacctgct gagaagggtg acgtacgcaa cctgaccaac
      481 accacgggcg tcgctgaccg cgaccccacg tggtcgccgg acggtaagtg gatcgcctac
      541 ttctccgatg agtcgggcga gtacgcgctc cacctcagac aacagagcgg gatgggcgag
      601 gtcaaaaaga tcgccctcgg gaatccgccg tcgttcttct acgggccaat ctggtcgccc
      661 gacagcaaga aggttgcgtt cacggacaag cggctcaacc tctggtacgt ggatctcgac
      721 aaaggaacgc cgatcaaggt tgacacctcg cggcgtggcg caggcttcaa tgccagttgg
      781 tcgccggata gccgctggct tgcttacacc aggccggtcg agtcgtggta cagcgcggtc
      841 ttcatctatt cgttggagga agcgaaaacg cggcaagtga cagacggttt gagtgatgcg
      901 agttgggcca cgttcgacaa gaatggcaag cacctctact tcatggccag caccgacatc
      961 gggccgaaac tttccggctt cgatatgtcg ggctatccgc atcaaccgac gcgcagcgcc
     1021 tacgtagtcg ttctgaaaaa gaccgaccct tcaccgctcg cgcctgaaag cgatgaagag
     1081 aaaacaggcg aagagaaaaa gcctgaagca ccgggtgaca agccggcgga gagcgaacag
     1141 aaagccgatc cggctgcgcc tgcggccgct gctaagcccg gtgctaaacc cgatgacaag
     1201 aaggcgccgc cgaaagtcac aatcgacttt gagcgtgccg accagcgcgt ccttgctctg
     1261 ccaatcccgg cccgcaacct catagcaatg gcgacgggca aagcgaatac catcttcctt
     1321 cttgaagctc tgccgcctgc tcccggtgtg acgggggtca cgctgcacaa gttcgacatg
     1381 gagaagcgca agttcgaaaa ggttctggac ggcgtgcgca gctttgacct ctcggccaac
     1441 ggtgaaaaga tgctgttccg tcaagccgac aactggttca tcgtttccac cacgcagccg
     1501 atcaaacccg gcgaaggaaa gatcaagacc gaggacatcg aggtctatgt tgacccgaag
     1561 gccgagtggc accagatgta tcgcgaggcc tggcgcattc agcgcgactt tttctatgac
     1621 cccaatcacc acggcctcga tctgaaggca gcggcgaaga agtatgagcc gtacctgaat
     1681 gcgctcactc accgcgctga cctgagttat ctcttccagg aaatgttcgg tgagttgacg
     1741 gtcggccatc tcaacgtcgg gggcggagac atgcccgacc ccaagcgcgt gccgggcgga
     1801 ttgctaggcg caaactatgc cattgaaaac ggccgatatc gtttcgccaa aatatttgat
     1861 ggtgagaatt ggaacccgca actgcgcgcc ccgctcacgc aaccaggggt caacgtgcag
     1921 gagggcgaat acctgctcgc cgttaacggc cggaatctaa cggcgaatga caacattcac
     1981 agctactttc agaacaccgc caacaaacag attgtgatcc gcgtcggatc taagccggac
     2041 ggcgccggct cacgcgaagt cacggtcgtc ccggttccga acgaaggcgg tttgcgaact
     2101 ctggcttgga tcgaaggcaa ccgccgcaag gtggacaaga tgaccggcgg caagctcgcc
     2161 tacgtctggt tgcccgacac ggccggcggg gggtacacca acttcaaccg ttactacttt
     2221 gcgcagcttc acaaacaggg agcggtaatt gatgagcgct tcaacggcgg cggtcacgcg
     2281 gctgactaca tcatcgatta cctccaaaag ccgttgaaca gctactgggc agtgcgcgac
     2341 ggcgatgact ttcgccaacc attcggcacg ctgcctggtc cgaaggccat gatcatcaac
     2401 gagtacgccg gcagtggcgg cgatttactg ccctggatgt ttcgccggca cagcattggc
     2461 ccacttatcg gaaagcgaac ctggggcggg ctggttggca tcggcggtta cccggtgttg
     2521 attgacggtg gttcggtaac ggcgccgcac ttcgcgttct acagccc
//
LOCUS       DATDBY010000235         7456 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1027101, whole genome shotgun sequence.
ACCESSION   DATDBY010000235 DATDBY010000000
VERSION     DATDBY010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 7456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7456
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1027101"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2073)
                     /locus_tag="VIT19_04360"
     CDS             complement(<1..2073)
                     /locus_tag="VIT19_04360"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEY5838246.1"
                     /translation="MRKNLLFVVPLIIVTALAGFAQSARRPLKLDDLARFRNVGDPQI
                     SPDGQSIAYTVSTIDAKEDKSNTHIWLVAYDGTNDRQITFSNDSENAPRWSPDGKYLA
                     FTSSRSSGKQGVRGSQVWLLDRNGGEAFQLTELKGRLQGYEWSPDSKRLALVIGDPDP
                     DAPDPTATPAPGTPPKPPKPIVIDRYRYKQDVQGYLLTGRHTYIYLFDIATKKLERLT
                     KSKWDESSPSWSPDGTRLAFMSNHADDPDRDPAAQLYVVDAKPGSTEKLLSTEANRAN
                     RARPEWTRDGKSIVFLEADEKKYGAYSMDHLVFVPADGSAPPSRVKAVEDLDRGVSGL
                     RNSSDGQSLIALVTDNRSVYPISVTRNAVKRLVDPPVVLSNLSLAGGRTVLLCADDKR
                     PTEICALEGKTLRRLTHQNDALMNELQIGATEEVSFKSKDGTEVHGLLTYPIGYTKGT
                     KVPLLLRIHGGPNAQDQHSFALERQLFAANGYAVLAVNYRGSSGRGQKFSRAIFADWG
                     NYEVQDLLAGVDHVVAMGVADPDRLGVGGWSYGGILTNYLIATDTRFKGATSGAGVAF
                     TVAFYGTDQYIIQYDNEIGPPWNPKAWETYVRISYPFLHADRIKTPTLFLGGERDFNV
                     PVQGSQQMYQALRSLGVETQLVIYPNEFHGIQRPSYVRDRYERYLGWYEKYVKNPKPA
                     KKNVAEGPR"
     gene            2368..3195
                     /locus_tag="VIT19_04365"
     CDS             2368..3195
                     /locus_tag="VIT19_04365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838247.1"
                     /translation="MARKSKPKSRRRRTESEEIAALDPMRTGMPALDSIISVRPMASP
                     EAQALAESGQAPAFRIIRTNEVDGYEKAATTQETLSAALAEAAPVGDKFGGTQRKAAK
                     LSIAAAPTKTFADVRSLVNSLVPDADMANRTPKVSKAATSNRVTEEKRNVRVKAWLYA
                     ASRENDNDYHLILGRDPKKSPEVYMTMELSGLPPANAASFDKLKAARDAYKAFFAADL
                     PGLTYDFYDPPIPVRVEGSLFWDAGHATGTRPGPKSLKSRMPVVWEVHPITKIVFNP"
     gene            3214..3429
                     /locus_tag="VIT19_04370"
     CDS             3214..3429
                     /locus_tag="VIT19_04370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838248.1"
                     /translation="MAARSSKKKKLSGGSKRQPPLDPMRRGMPAQDSIVSVKEMTRGG
                     KTFRIIKTSEMDEYDRAPKKKRKKPKG"
     gene            complement(3442..3684)
                     /locus_tag="VIT19_04375"
     CDS             complement(3442..3684)
                     /locus_tag="VIT19_04375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838249.1"
                     /translation="MANEEQANLAREQHADFLRDLGAHGITIDEMKERGEKTFAVVAL
                     FDRQPEEIPDTLEIKRGKKVMTVPLVARVAKKFKAE"
     gene            complement(3702..4796)
                     /locus_tag="VIT19_04380"
     CDS             complement(3702..4796)
                     /locus_tag="VIT19_04380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838250.1"
                     /translation="MPSQLAEESLERVLNLFTKTPRPAPKRIAFRKRGGGFASAPSQG
                     RAESVSASPMRKIVATDNCVAMGISEKVSEGKRSGTLAITFYVERKLPKGKLSPEHRI
                     PAEVPEALSRGESILTDVKEIGRLRPELNARRKPFQPGNSIGHVDAGAGTLGAVVTRD
                     GEFYILSNSHVLALSGLARRGDAIVYPGSIDGGASEDLVAKLARFKKFKLGSAFVNRV
                     DCAIAKPTPERLGDLMAEIKGLGLPGRTTKPVRGMKVTKVGRTTGKTTGKIEDVHFRF
                     TLDYEGDVGVVGFIDQVLCTRYTDEGDSGSLVVEKATGRAVGLHFAGAEGGSVFSPID
                     EVLKTLGVKLVTKALAKSVKTKPAKKAGSK"
     gene            complement(4824..5081)
                     /locus_tag="VIT19_04385"
     CDS             complement(4824..5081)
                     /locus_tag="VIT19_04385"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEY5838251.1"
                     /translation="MASVISGVVRGPDGTPIPNARVYFTSGPVPLPEIAALTDSSGEF
                     SLTAPAPGEYVIEAVTDEFGPQSSTAKVKANKPVRLTLSLK"
     gene            complement(5112..6074)
                     /locus_tag="VIT19_04390"
     CDS             complement(5112..6074)
                     /locus_tag="VIT19_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838252.1"
                     /translation="MATSKKLPVPKGGHAPLSSLSQEAAEATSPTSTDSRPPAEGKNP
                     KTKKSRKDGAEDVAGFKGLKESAAKAESLKAPNTSKLKDIGEASYGPPRAKAETVHGP
                     DNRVRITNTSAYPWRVHASLLITAADGSNWIGTAWFIGPHTLITAGHCVYIKNSGVPG
                     RDGWVKSIDVMPGRNVSSLPYGKVTSKNFRTVAGWVNSGDENFDYGAIIIPTELGNTT
                     GWFGFGVYSDATLKASVGNISGYPGDKPAGTQWYDAHKIDSVNARKVYYDIDTFGGQS
                     GSACYRIINGARYGIAIHAYGGASTNSGTRIVTPVFQNMVNWKA"
     gene            6385..>7456
                     /locus_tag="VIT19_04395"
     CDS             6385..>7456
                     /locus_tag="VIT19_04395"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY5838253.1"
                     /translation="MQLNHLPTTKRAAICAALLFIAFGLVPTGCRRAATQPSLTLAIN
                     SGVEGDALKQAAKDYEQQTGIHINIAEFPYANLFEKELIDLNARTGAYDLIMLDDPWF
                     PKFASLNVLTDLTPLLQKRGKSGPDDDFVATSIALGREPYQTGALYALPYVGNSQLFF
                     YRKDLFQKHNLKEPATWDEVLTAAKTISENETNGAPGGGKVYGYVMRAAQGNAAVADF
                     MPIFWAFGGEMFDTAEQPTVNSPEGIAALKFMIELGKYSPPGYASFNADEVGAHLLQG
                     TAAMSINWPAWISSFSDPSKSKVTARMEFGQLPATKNPGRAEIGNWLIAIPRDAKNIE
                     AAMDFLLWATNREQMKLSAQRGN"
BASE COUNT         1589 a         2142 c         2107 g         1618 t
ORIGIN      
        1 tcgcggccct tcagccacat tcttcttcgc gggctttgga ttcttcacat acttctcgta
       61 ccaaccaaga tatcgttcat accgatcgcg gacatagctc ggccgctgga taccgtgaaa
      121 ctcgttcgga taaatcacga gttgagtttc gacgcctaag ctgcgcaacg cctgatacat
      181 ttgctgactg ccttgcaccg gcacgttaaa gtcgcgctcg ccgccgagaa acagggtcgg
      241 cgtcttgatg cgatcagcgt gcaggaacgg atatgaaatc ctgacgtatg tctcccatgc
      301 tttcggattc cagggcgggc cgatctcgtt gtcgtattga atgatgtact ggtcggtccc
      361 gtagaaagcg acagtgaacg ctacgcctgc tccgctggtt gcgcctttga agcgcgtgtc
      421 agtcgcgatc agatagttgg ttagaattcc gccgtaactc cagccgccca cgcccagccg
      481 atccggatcg gcgacgccca tcgcgacaac gtggtcgacg ccggcgagta gatcctgcac
      541 ttcgtagttg ccccaatcgg cgaagatcgc gcgcgagaac ttctgcccgc ggcctgaact
      601 gccgcgatag ttcaccgcca gcactgcata gccgttcgcc gcaaatagct gacgctcaag
      661 cgcgaacgaa tgctgatcct gcgcgttcgg tccgccgtgg atgcgaagca acagcggcac
      721 ttttgtgcct ttcgtgtagc cgatcggata agtcagcaac ccgtgcactt ccgttccgtc
      781 tttgctcttg aaactgactt cttcggttgc gccgatttgc agctcgttca tgagcgcgtc
      841 gttctgatga gtgagccgcc gcagcgtctt accttccagc gcgcagattt ccgtcggccg
      901 tttgtcgtcc gcgcaaagca agacggttcg accgccggcg agcgacagat tcgataagac
      961 aaccggcgga tcgaccaggc gtttcaccgc attccgcgtg acgctgatcg gataaaccga
     1021 tcggttgtca gtaaccaacg cgattaacga ctggccatcg cttgaatttc gcaagccaga
     1081 aacgccgcga tccaaatctt cgacggcttt cacgcgcgac ggcggcgcac tgccgtctgc
     1141 cggcacgaat acaaggtggt ccatgctgta cgcgccgtac tttttctcgt cagcttcaag
     1201 gaaaactatg gacttaccgt cccgggtcca ttcggggcgc gcgcggttcg cgcgattcgc
     1261 ctccgtcgaa agcagttttt cagttgaacc cggcttggca tcgacgacat ataactgcgc
     1321 cgcggggtcg cgatccggat cgtccgcgtg attgctcatg aaagcgaggc gcgttccgtc
     1381 aggcgaccac gaaggcgaag attcgtccca cttactcttc gtcaaacgct cgagtttttt
     1441 ggtcgcgatg tcgaacagat agatgtaggt gtgccggcca gtcagcagat agccctgcac
     1501 atcctgcttg taacggtaac gatcgatgac gattggcttc ggcggtttcg gaggcgtgcc
     1561 gggcgccggc gtggcggtcg gatcaggcgc gtcgggatcc ggatcgccga tgaccagcgc
     1621 caggcgtttc gaatcgggcg accattcgta gccctgcaaa cggcccttca actccgtcag
     1681 ttggaaagct tcgccaccat tacgatcgag cagccaaacc tgactacctc tcacaccttg
     1741 tttgccggaa gaacgcgacg aagtgaacgc gaggtacttt ccgtcaggac tccagcgcgg
     1801 ggcattttcg ctgtcgttac tgaaagtaat ctgccgatcg ttcgtgccgt cgtaagcgac
     1861 cagccagatg tgcgtgttgc tcttgtcttc tttcgcgtca atggttgaca ccgtgtaagc
     1921 gatcgattgg ccgtcgggcg aaatctgcgg atcgccaaca ttgcggaaac gcgcgagatc
     1981 gtcgagcttc agcggccggc gcgcgctttg ggcaaagccg gccagggccg taacaatgat
     2041 tagcggaacg acaaagagaa gattcttacg cactattcaa ttacctccgg ttcgactcgc
     2101 agggagttca attgcttgga gatattaatt ccgcctgatc gactttccaa gcctaaatcg
     2161 gcttctcacg gtttcggtac cagtctataa tgcgcgcagt atcccgagcc tgatcacgag
     2221 cggttgaatt tgcgccggtc gaattatctg aagcgcagat gttcctcaaa gagctctgct
     2281 ccccagaatc tcaatttctc tagtcgccac agccgagcaa tcccttaatc ggatgaggca
     2341 gcttcccaac tgaaaggaga tctcaccatg gcacgaaaat ctaaacccaa gagccgccgc
     2401 cggcgaactg aatccgagga aattgccgcg cttgatccga tgcgcaccgg aatgccggcg
     2461 ctcgactcaa ttatcagtgt tcgtccaatg gcttcgcccg aggcgcaggc tttagctgag
     2521 agcggacaag ccccggcttt ccgcatcatt cgcaccaacg aagtcgatgg ttacgaaaag
     2581 gctgcgacca cccaggaaac gctgtcggcg gccctcgccg aggctgcacc tgtcggcgat
     2641 aagttcggcg gaacccagcg caaagccgcc aagttatcga ttgccgcggc gccgacgaag
     2701 actttcgcgg acgtgcgcag cctggttaat tctctggttc ccgacgcgga catggcgaac
     2761 cgcacgccaa aggtatcgaa ggcggcaact tctaatcgcg tcacggaaga gaagcgaaac
     2821 gttcgggtga aggcgtggct gtacgcggcc agccgcgaaa acgacaacga ctaccacctg
     2881 attctcggtc gcgatccgaa aaagagcccg gaagtgtaca tgacgatgga attgtccggt
     2941 ttgccgccag caaacgcagc ttcgttcgac aaactgaagg cagcgcgcga cgcctacaag
     3001 gcatttttcg cggcggacct tcccggcctg acctatgact tttacgatcc gccgatcccg
     3061 gtgcgcgtcg aaggctcgct gttttgggac gccggtcacg cgacaggtac gcggccaggt
     3121 ccgaaaagtt tgaagagtcg catgcccgtc gtctgggaag tgcatccgat caccaagatc
     3181 gtttttaatc cctgagcgag agacggcgac acgatggcag cacgttcgag caaaaagaaa
     3241 aagttaagcg gcggttctaa gcgacagccg ccgcttgatc cgatgcggag aggaatgccg
     3301 gcgcaggatt cgatcgtcag tgtgaaagag atgacgcgcg gaggcaagac gttccgcatc
     3361 atcaagacgt ccgaaatgga cgaatacgat cgagcgccga agaagaaacg aaaaaagcca
     3421 aagggctaag tgttaaatcg gctactcggc tttgaacttc ttcgccaccc gcgcgaccaa
     3481 cggcaccgtc ataactttct tcccgcgttt aatctcgagc gtgtcaggaa tttcttccgg
     3541 ttggcgatca aaaagagcga ccacggcaaa ggttttttcg ccgcgctctt tcatttcatc
     3601 gatggtgatg ccgtgcgcgc caaggtcccg caggaaatcc gcgtgttgct cgcgcgccag
     3661 gttcgcttgt tcttcgttag ccatccgcag ccattcagtt actacttcga cccggccttc
     3721 tttgctggtt tcgtctttac ggatttcgcc agggcctttg tcaccagctt aacgccgagt
     3781 gtcttaagga cttcgtcgat ggggctaaag acgctcccgc cctctgcgcc ggcgaaatgc
     3841 agaccgaccg ctcgccccgt ggccttctca accaccagag aacctgaatc accctcgtca
     3901 gtatagcggg tacagaggac ctgatcgatg aaacccacga ccccgacgtc accttcatag
     3961 tccagggtga agcgaaaatg cacgtcctcg atctttccgg ttgtcttgcc ggtcgtacga
     4021 cctaccttcg ttaccttcat tccgcgcacg ggcttggtcg tgcgccccgg caggcccaag
     4081 ccttttatct cggccatcaa atcgcccagg cgctccggcg tgggtttggc aatcgcgcaa
     4141 tccacacgat taacaaaggc cgagccaagt ttgaacttct taaagcgcgc cagctttgcc
     4201 accaggtctt ctgacgcgcc accgtcaatg ctgcccggat aaacaatcgc atcaccccgt
     4261 cgcgccaatc cggaaagcgc tagaacgtga ctattgctca agatgtaaaa ctcgccgtcg
     4321 cgtgtgacca cggcgcccag ggtaccggcg cccgcgtcga catgcccgat gctgttgcct
     4381 ggttgaaaag gtttgcggcg agcgttcaat tcgggacgca accttccgat ctcttttacg
     4441 tcggtgagga ttgattcgcc acggctgagc gcctcaggca cttcggcggg gatgcgatgc
     4501 tcaggactca atttcccctt cggcaacttg cgctcgacat aaaacgtaat tgccagcgta
     4561 cccgaacgtt taccctctga gactttctcg ctgataccca tggctacgca attgtctgtg
     4621 gcgacgatct tgcgcatagg cgatgcggac actgactcgg cccgcccttg cgagggagcg
     4681 gaggcgaagc cgccgcctcg cttacggaaa gcaatcctct taggcgcggg ccgcggtgtt
     4741 ttagtgaaga ggttgagaac gcgctcaagg ctctcttcag caagctgcga gggcatttcg
     4801 ttttctccag tcgtaaggac ttgtcactta agtgaaagag taaggcgaac tggtttgttc
     4861 gccttaacct tcgccgtcga ggattgtggg ccgaattcat cggtcaccgc ctcgataaca
     4921 tattcacccg gagccggcgc cgttaaggaa aactcaccgc tactatcagt caacgcggca
     4981 atctcaggca gcgggaccgg cccggaagtg aaataaacgc gagcattggg gattggcgtg
     5041 ccgtcgggac cacgaacaac cccggaaata acactggcca ttgactgtcc tttctcgaag
     5101 agacggttgc ttcacgcctt ccaattaacc atgttttgga aaactggggt gacaatacgc
     5161 gtgcctgagt tcgtgctcgc gccgccgtac gcatgaatag cgataccgta gcgagcgcca
     5221 ttgatgatgc gatagcaggc actgccgctc tggccaccga acgtgtctat gtcgtaatag
     5281 acttttcgcg cgttgacaga gtcgatctta tgcgcgtcgt accactgcgt gccggctggc
     5341 ttgtcaccgg gatatccgga gatgttaccc acagatgcct tgagagttgc gtccgaatag
     5401 acgccgaaac cgaaccagcc ggttgtgttc cccaactcag tgggaatgat gatcgcgcca
     5461 tagtcgaaat tctcatcgcc tgagttgacc caaccggcca cggtgcgaaa atttttgctc
     5521 gtgacttttc cgtacggcaa agagctaacg ttacgaccgg gcatgacgtc gatactcttc
     5581 acccatccgt cgcgtcccgg aacgccgctg tttttgatgt acacgcaatg acccgccgtt
     5641 atcaaagtgt gcggtccgat gaaccaggcc gtgccaatcc agttggaacc atcggccgcg
     5701 gtgatcagca gcgaggcgtg cacgcgccac ggataggctg acgtgttggt aatcctgacg
     5761 cgattgtccg gaccatggac ggtctcagct ttcgcgcgcg gtgggccata ggatgcctca
     5821 ccgatgtctt tcagcttgct tgtattgggt gcctttaaag actcggcctt ggcggcgctt
     5881 tcttttagtc ctttgaatcc agccacatct tcagcgccgt ctttgcggga tttcttggtt
     5941 ttgggatttt taccttctgc tggcggtcgt gagtccgtcg atgttgggct cgtggcttcg
     6001 gcagcttctt gagagaggct tgagagtggt gcatggccgc ccttgggaac gggtaacttc
     6061 ttgctggttg ccatatgagt gtctcctttt tgggaagttg aggtggtgcc gaacctgaaa
     6121 caactggtca ggcgtcaaac actctcgctt tcagctcggc gggttcaggt gagggtgttg
     6181 gagtatgtcg cctgatttga ggccgcgacg atattcccat tcgaccgaaa acgcaagaca
     6241 aatcttgccc acgcccggtc gtatctgaag agaaaaaagg ctgaagcggg tggcggctaa
     6301 gaattgtgcc aagccggtcc cttggcgagt ttccaagtgc ttgaacctaa gtgggtttat
     6361 cgataaggta cacgccaaaa cacaatgcag ttaaaccact taccgacgac gaaacgggcc
     6421 gcgatttgcg ccgctttgct tttcattgca ttcggcctgg tcccaactgg ctgccgtcgc
     6481 gcggcgacgc aaccgagtct cacgctggca atcaattccg gcgtcgaggg cgacgcgctc
     6541 aaacaggcgg cgaaggatta cgaacaacaa accggaatcc acatcaacat cgccgagttc
     6601 ccgtacgcga atcttttcga gaaggagttg atcgatctga acgcgcgcac gggcgcttac
     6661 gatctgatca tgctcgacga tccgtggttt ccgaaattcg cttcgctaaa tgtgcttacg
     6721 gatttgacgc cattgctcca aaagcgcggt aagagcgggc cggatgatga ctttgtcgcg
     6781 acgtcgattg cgctcgggcg cgagccttat cagaccggcg cgttgtacgc gttgccatac
     6841 gtcggtaact cgcaattgtt tttctaccgg aaagacctgt ttcagaaaca caatttgaaa
     6901 gagccggcga cctgggacga agttctgact gcggcaaaaa cgatcagcga aaacgaaacc
     6961 aacggagcgc cgggcggcgg caaggtttac gggtacgtaa tgcgtgcggc gcagggtaac
     7021 gcggcggtag ccgatttcat gccgattttc tgggccttcg gcggcgagat gttcgacacg
     7081 gcggagcaac cgacagtgaa cagcccggaa ggaattgccg cgcttaagtt catgatcgag
     7141 ctcggcaagt actcgccgcc cggctacgcg agtttcaatg ctgacgaagt gggcgcgcac
     7201 ctgctgcaag ggacggcggc gatgtcgatc aactggccgg cgtggatcag ctcgttcagc
     7261 gatccgtcga agtcgaaagt tacggcccgg atggagttcg gtcagttgcc ggccacgaaa
     7321 aatccgggac gcgctgagat cggtaactgg ctgattgcga ttccgcgcga tgcgaaaaac
     7381 atcgaagccg ccatggattt tctgttgtgg gcgaccaacc gcgaacagat gaagctgtcg
     7441 gcgcaacgcg gcaatc
//
LOCUS       DATDBY010000236         5082 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2677027, whole genome shotgun sequence.
ACCESSION   DATDBY010000236 DATDBY010000000
VERSION     DATDBY010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5082
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2677027"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /locus_tag="VIT19_04400"
     CDS             <1..415
                     /locus_tag="VIT19_04400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838254.1"
                     /translation="AKARVKLTIELADARLAHMEALTSHKEFEKASEALGTYLGLIED
                     AMRFIGGMPREKNSTRDLYRRLDIALRAQIPRLAVMRRDTPSDYSIHLKTAEEYARNT
                     RTEALESFYGHTVLREDPEKKADANKATPQDNKRP"
     gene            423..983
                     /locus_tag="VIT19_04405"
     CDS             423..983
                     /locus_tag="VIT19_04405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838255.1"
                     /translation="MFLPPRIPGRLVLLAVISLSFAAIAIAQPRDHLTDQETELIRFH
                     QQLDKRVDVFIKAMDRRFAIINGLEQAKTKKLDREEPEWGDLPKGSRAQLLGDIASIL
                     DEAITNIDDVSRRDEKSPLISRSLRKLTAATNGYVTQVKSMASQTKDGDELSAIERVL
                     QHAEQIIEVGNQLPSPSTDKKKKNNP"
     gene            1167..1736
                     /locus_tag="VIT19_04410"
     CDS             1167..1736
                     /locus_tag="VIT19_04410"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEY5838256.1"
                     /translation="MESRYYPGVEADTIKLMTELRDLFDENFDLQTMQVSSTAILQAR
                     KSSTLRDITGLSAALTIKVTPESGGTRVEIGMQKWFDKAAVAAVALALSAGLLLALPA
                     LGAYWQYKLTEDAWKKIEAHITRKAGGYVPPMPGRCGTCGAAASAGSAYCSGCGANLR
                     VGLSCPHCNAMQKDSTAKFCNSCGKSLTN"
     gene            complement(2015..3502)
                     /locus_tag="VIT19_04415"
     CDS             complement(2015..3502)
                     /locus_tag="VIT19_04415"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY5838257.1"
                     /translation="MSFFDILRLALRNLREAKLRATLTSMGVIVGVAVIVTMVSFGLG
                     LQRNMLTRFRALDLFNEIRVFGKSIFTMAMNVDPKLRRDATPGERRGPAFRPNQEATR
                     ILDDTAIAEIQKIPNVAYVEPDINFTVYVRCNDQVSPVVVGGASVPNYSSRFKTFAAG
                     QMISSMNADEVVIDEVTAETCGYAKSSDAVGKMIEFLTTRTEANANEKPAEKGTDENA
                     DEGFSFFGLPLEDSQTAPANSIVGRRLRIAGVLGREKRDGAAQGGPVGLMTNSHMYVP
                     LPIAREWSVKHRNPMSEVALALARQSGELDETESEGYSSAVVRVSDPVALTEVRKQIK
                     ERGFASVSIVDQLDQIRTVFLIIDSVLGLLGGISLLVASFGIANTMIMSILERTREIG
                     IMKAIGAEDREIKLIFFFEAAVIGLTGGVIGVLAAWAIEGIANRLAYRFVLKPQGASF
                     VDFFSMPPYLWIGAILFALLVSILAALYPAARAARIDPVRALRHD"
     gene            3705..4298
                     /locus_tag="VIT19_04420"
     CDS             3705..4298
                     /locus_tag="VIT19_04420"
                     /inference="COORDINATES: protein motif:HMM:NF015142.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838258.1"
                     /translation="MKTPGHTLTKITAAIALLAAIATVAISKGNSDAAFSNIKISNFG
                     QMDERFYRGARPKQKDFQTLKDLGIQTVIDLTDNTPKEKGYVEALGMTYVNIAIPDRK
                     DPSNEQIAQFLKLVNDPATGKFYVHCAGGRHRTGVMGAVYRFNNYQWNFNQVYAEMEN
                     FDFYTSNGHGGQKRFVESYAQRMQSEIATQAAAQGSK"
     gene            4532..>5082
                     /locus_tag="VIT19_04425"
     CDS             4532..>5082
                     /locus_tag="VIT19_04425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838259.1"
                     /translation="MHSLGKNRALALIACFLIVVASLEVYSFVKLEKDRDKVEKQNKD
                     KKNKDKGTPVLWRNPGDMRQRDLYYGAGSKALTPTPPFKFVKEDKSGKSPKFEVVDAR
                     GVKWKVKLGPEAQAETVANRLVWAAGYNTEETYYLDRAQIDGLKKLSRGQNFVNGQSV
                     RGARFESRRENVDRGKHWDWAKNP"
BASE COUNT         1197 a         1456 c         1387 g         1042 t
ORIGIN      
        1 cgcgaaggca cgcgtcaagc tcaccataga attggccgac gcgcgtttag cacacatgga
       61 agcgttaacg tcgcacaagg aattcgagaa agcttccgaa gccctcggca cctatctggg
      121 gctaatcgaa gacgcgatgc gcttcatcgg cggcatgcct cgcgagaaaa acagcacgcg
      181 cgatctttac cggcggctcg acatcgcttt gcgcgcgcaa attccgcggc tggccgtcat
      241 gcgccgagac acgccgtcgg attattcgat tcacctgaag accgcggaag aatatgcgcg
      301 caacacgcgc acggaggcac tggaatcttt ctacggccac acggtgctgc gcgaagatcc
      361 ggaaaaaaag gcggacgcca acaaggctac tccgcaggac aacaagcgtc cttaatctca
      421 ttatgtttct acccccgcga atccctggcc ggttagttct cctcgctgtc atctcgcttt
      481 cgtttgcggc gatcgcgatc gcccagccgc gcgatcacct gactgatcag gaaaccgagc
      541 tcattcggtt tcatcagcaa ctcgacaagc gagtcgatgt cttcatcaaa gcgatggatc
      601 gccgattcgc gatcatcaac ggcctcgaac aagcgaagac gaaaaagctc gatagagaag
      661 agcctgaatg gggcgacctg cccaagggtt cgcgcgcgca actgttgggc gacatcgctt
      721 ccatcctgga cgaagcaatc accaacatcg acgatgtcag tcgccgggac gaaaagagtc
      781 cgctgatctc gcgctcgcta cgaaagctta ccgcggcaac aaatggctat gtgacacagg
      841 taaagtctat ggccagtcaa actaaagatg gcgacgaact ttcggcaatc gaacgcgtcc
      901 tgcaacacgc cgagcagatt attgaagtcg gcaaccaact tccatcgcct tcgactgata
      961 agaagaaaaa gaacaatccg tgagggccac tcgaccgcgt cctgttctga ctcagtgttt
     1021 tcgtggtttc tcggtgtctc tgtggtgaat cttgttgagc gcaataacca caaagacacg
     1081 gagacaaccg ttcgacagca accccgcaat cgtagtttcc tgaactatcg cccggcgctt
     1141 aacgtaggat cacgcgagga gaatttatgg aaagccgcta ctatcccggg gtcgaagccg
     1201 acacgatcaa gttgatgacc gagctgcgcg acctgtttga cgaaaatttc gatctgcaga
     1261 cgatgcaggt ctcttcgacc gcaatcctgc aagcgcgcaa gtccagcact ctgcgcgaca
     1321 tcaccggact ttccgccgcg ctcaccatca aagtcacacc tgagagcggc gggacgcgcg
     1381 tcgaaatcgg catgcaaaag tggttcgaca aagcggcggt tgccgccgtc gccctcgccc
     1441 tgtccgccgg tctgttactg gcgctgcctg cgctcggggc ctactggcaa tacaaactca
     1501 cggaagatgc gtggaagaaa attgaggcgc acatcacgcg caaagccggc ggctacgtac
     1561 cgcccatgcc cggtcgttgc ggaacctgcg gcgcggccgc gagcgccggc tcagcctatt
     1621 gctccgggtg cggcgccaac ctccgcgtgg gactctcttg tccgcactgc aacgcgatgc
     1681 aaaaagattc cactgcgaag ttttgtaact cttgcggaaa gtcgttgaca aactaagcgc
     1741 tacgccctat tagaagcggc atgcgacctc atcgtggatc cgccgtcctg gtttacggaa
     1801 tcctgagcct cgtggtgtgt ccactccttg gcgttgcggc ctggcggatg ggtaccgacg
     1861 acttgagaga gatggagttt ggtcaaatgg atccgtccgg gagggactta actaacgcgg
     1921 ggcggatttg cggaatggta gggaccggga ttctgatctt tcagctcgcc attatcttta
     1981 tcgccctcgt tttagcgtta ctttccccgg cacgctagtc atgtctcagc gctcgcaccg
     2041 gatcgattcg cgccgcgcgc gcagccgggt atagcgctgc gagaatcgaa accagtaacg
     2101 caaacagaat cgcgccgatc cagaggtaag gcggcataga aaagaaatcg acgaacgaag
     2161 cgccttgcgg cttgagcacg aagcgatagg ccagacgatt tgcgatgcct tcgatcgccc
     2221 acgcggccag caccccgatc actcctccgg ttaatccgat cacggcggct tcgaaaaaga
     2281 agatcagttt gatctcgcgg tcttcggcgc cgatggcttt catgatgccg atttcgcgcg
     2341 tgcgctcgag aatcgacatg atcatggtgt tcgcgatgcc gaagctagcc accagcagag
     2401 aaatcccgcc gagcagtccc agcactgaat cgatgatcag gaacacagtg cgaatttgat
     2461 caagctgatc aacgatcgaa acgctcgcga agccgcgctc cttaatctgt ttgcgcactt
     2521 ccgttaaagc gacgggatcg ctaacgcgta cgactgccga gctgtacccc tcgctttccg
     2581 tttcgtcgag ctccccgctt tgccgcgcca gcgccagcgc cacctcactc atcggattgc
     2641 gatgtttgac tgaccactcg cgagcgatgg ggagcggcac gtacatatgc gagttcgtca
     2701 tcagaccaac cgggccgcct tgcgctgcgc cgtcgcgctt ttcgcgcccg aggacaccgg
     2761 cgatgcgtag ccttctccca acgattgagt tcgccggcgc agtctgagaa tcctcgagcg
     2821 gaagcccaaa gaagctgaag ccttcatcgg cattctcgtc tgttcccttc tccgccggct
     2881 tttcgttggc atttgcttcc gttcgcgtgg tgagaaactc gatcatcttg ccgacagcat
     2941 ccgaagattt ggcgtagccg catgtctcag ccgtgacctc atcaatcaca acctcgtcgg
     3001 cattcatgct gctgatcatc tggcccgccg caaaggtctt gaatcgcgac gaataattcg
     3061 gcaccgaagc cccgcctacg acaaccggcg agacctggtc attgcagcgg acgtacaccg
     3121 tgaaattgat gtctggctca acgtaggcga cattcggaat cttttgaatc tcagcgatcg
     3181 cggtgtcatc aagtatgcgc gttgcttcct ggttcggacg gaacgcaggc ccgcgacgct
     3241 cgcccggcgt agcgtcacgg cgcaattttg gatcgacgtt catcgccatc gtgaagatgc
     3301 tcttgccgaa cacgcgaatc tcgttgaaga gatcaagcgc gcgaaaccgc gtaagcatgt
     3361 tgcgctgcaa gccgagcccg aacgaaacca tcgtcacgat tactgcgacg ccgacgatga
     3421 cgcccatcga agtgagcgtc gcgcgcagtt ttgcttcacg aagattacga agcgccaacc
     3481 gaagaatgtc gaagaaagac atgttgtgat ccggcgaata cgagattgag attaacttat
     3541 tttccagtca caacaaacgg tacgcgcgtc gctggcgcgc tgaagcacct cgaaggtgtt
     3601 tacacccgaa cttttggtgc aactatgaac cgattccatg aatcctaacc tcgtccgcgg
     3661 cgtaactcct ggccgtggaa atcccttaaa ttggagatca cgaaatgaaa acacccggac
     3721 atactttgac caaaattacg gcggccatcg cgctgctcgc cgccatcgcc acggtggcta
     3781 tttcaaaagg taattcagac gcagcttttt caaacataaa gattagtaac ttcggtcaga
     3841 tggacgaacg cttctatcgc ggtgctcggc cgaagcagaa agattttcaa actctgaagg
     3901 acttaggcat tcaaacagtg attgatttga cggacaacac gccaaaggag aaaggttacg
     3961 tcgaagcgct cggcatgacg tatgtcaata ttgcgattcc tgacaggaag gatccctcta
     4021 acgagcaaat cgctcagttc ctgaaactcg tgaatgaccc tgcgaccgga aaattctatg
     4081 tgcactgcgc cggcgggcgt caccgcacgg gggtgatggg cgcggtctat cgcttcaaca
     4141 actatcagtg gaacttcaat caggtgtatg ccgagatgga gaacttcgac ttctacacct
     4201 cgaacggcca tggcggccag aagcgtttcg ttgagagtta cgcgcagcgg atgcagtccg
     4261 aaattgctac acaggctgcg gcacaaggat ccaaataaag ctccgacagc cctctatcca
     4321 acaacatgag agccgtccgt tatggacggc tttcgtgctt ttaggggtct taatcctcct
     4381 aatcttgtga gactgtgaag cttctgttgc gaagcgtgct cgctccctcc tgagccacag
     4441 cgtttgctgt tcgtcggagc gattttcccc cgcgtcacag ccgcgccggc tgaaagtcac
     4501 cgttcacact ctcctgaatc gaggcctaac tatgcattcc cttggcaaga accgcgcact
     4561 cgcgttaata gcttgctttc tgatcgtcgt tgcgtcgctc gaagtttatt ccttcgtcaa
     4621 acttgagaag gatagagaca aggttgagaa gcaaaacaag gataagaaga acaaggacaa
     4681 gggcacgccg gtgctgtggc gcaatcccgg tgatatgcgc caacgcgatt tgtattatgg
     4741 agccggatcg aaggctttga cgccaacgcc accattcaag tttgtaaaag aggacaagag
     4801 cgggaaatcg cctaagttcg aggtcgtgga cgcgcgcggg gtgaaatgga aagtaaagct
     4861 cggtccggaa gcgcaggcgg aaaccgtggc gaaccgtttg gtttgggccg ccggttacaa
     4921 caccgaagag acttactatc tcgatcgcgc gcagattgat ggtctgaaaa aactatcgcg
     4981 cggacagaac ttcgtgaacg gccagtcggt gcggggcgcg cgctttgaat cgcgacgcga
     5041 gaatgtagat cgcggcaagc actgggactg ggccaagaac cc
//
LOCUS       DATDBY010000237         3844 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_823635, whole genome shotgun sequence.
ACCESSION   DATDBY010000237 DATDBY010000000
VERSION     DATDBY010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3844
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_823635"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1492
                     /locus_tag="VIT19_04430"
     CDS             <1..1492
                     /locus_tag="VIT19_04430"
                     /inference="COORDINATES: protein motif:HMM:NF040246.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TGS domain-containing protein"
                     /protein_id="HEY5838260.1"
                     /translation="VRIEGRVKRIYSIWKKLQAQAIDLDQVYDLVAARVITPNEIRHC
                     YAALGVIHHAWKPVPGRFKDWIATPRDNLYQSLHTSVIGSKVQPFEVQIRTEQMHLVA
                     EEGVAAHWKYKEGKRGARDDDEAMTLLRSLIEWTQEVKDSREFMDALKLDLYPKDVYA
                     FTPMGKVIQLPRGATTLDFAYMIHSEVGNTCSGARINTRMVPLRTQIQNGDVVEILTS
                     SNAHPSRDWLNFVVTSRARNRVRHWVADQQRAESIEIGRKLFEKEASRFQIPFKKLLS
                     DSNGDLKRIAGEYGYGRTDDLLAAMGYGKIVPRNIIAKYLGPEKFEALAQQKESKLRS
                     GVRAVRRLLGGDGAIVVRGVEDLMVNRARCCNPLHGEDIIGYITRGKGVAVHTKRCKN
                     VQQLMINPERIVNVEWASRPEKTAYAVKLLATTENRTGMIAGITGAISDMRTGIRDAR
                     ASIGPDQKGRIEVTVEVFDVKHLDKVTSSIKSVPGVLDVERLQGAV"
     gene            complement(1554..2957)
                     /locus_tag="VIT19_04435"
     CDS             complement(1554..2957)
                     /locus_tag="VIT19_04435"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY5838261.1"
                     /translation="MPTASEIPNAAQPPETFRRQSPPPLQSRPLNIPAPVELTLANEL
                     RVAVVSDTRLPIVSFRLAFVGGDSNDPPDLPGLSDMMSHLMSEGTSSRTSVQIAEEVE
                     RLGATLSVNSGSDFVTVGASALSQYVDEILELMADVTLRPSFPQNEIDLARENTKQML
                     IQQRAQPNFLASERAAKVMFGDHPYARISPTSASLDGMSRDMFVDFHRSRLVPNNAVL
                     LAVGDIEVDEIVAKLEKLFGAWKRETLAQSNFPALPQLSARKAYLVDRPGSAQSNIVI
                     ANAGIARTSPDYFPMLVMHTVLGANASSRLFMNLREEKGYTYGAYSSVDARRLAGSFR
                     VSAEVRTPVTGASLHEFFVELDRIRNERVPDEELRNAKSYLTGVFPIRIETQDGLIDQ
                     LTGVRMYELPSDYLHTYRDKVNAVTAEEVQRVAQQHVTPDRAVIVVVGDAAEVESQMR
                     DYAEQIEFYDTEGNKKQ"
     gene            complement(2992..3510)
                     /locus_tag="VIT19_04440"
     CDS             complement(2992..3510)
                     /locus_tag="VIT19_04440"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY5838262.1"
                     /translation="MLTITRKATAIAVFIFALSFASATFAQGGGVEFSMRAIDGESVT
                     SQSLRGEVAVMAFGTSWLPLTRTQLEGVKKLADQYAGKGVAVYWVSVDSDNPKSKNYV
                     PDDQLRDLARKYKVTILRDPDGVASRKMGVDQLPSVVILDKQGNIAASMGGMDPNANL
                     TTQLAARLDKIL"
     gene            complement(3551..>3844)
                     /locus_tag="VIT19_04445"
     CDS             complement(3551..>3844)
                     /locus_tag="VIT19_04445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838263.1"
                     /translation="GAKLIQPEFQGKGGHPVLIDLSYRDELKRLDSDAGLRGFFNKHR
                     ADVLRLPVASPFVARDMDTWEDYCALHEDVFGRKPEEITDLKGATNGKPKRLI"
BASE COUNT          846 a         1074 c         1134 g          790 t
ORIGIN      
        1 cgtgcggatt gaagggcgcg tgaaacgcat ctactcaatc tggaaaaaac ttcaagccca
       61 ggccatcgac ctggatcagg tttacgatct ggtggcggcg cgcgtgatta cgccgaacga
      121 aattcgccac tgctacgccg cactgggagt aatccatcac gcctggaaac cggtgccggg
      181 tcgattcaag gattggatcg cgacgccgcg cgacaatctg tatcagtcgc tgcacacgtc
      241 ggttatcgga tctaaggtcc agccgttcga ggtacaaatt cgcactgagc agatgcacct
      301 ggtggccgaa gaaggcgtgg ccgcgcactg gaagtacaag gaagggaagc gcggcgcgcg
      361 ggacgacgac gaagccatga ccttactgcg ttcactgatt gaatggacgc aggaagtgaa
      421 agactcgcgc gagttcatgg acgcgctgaa gctggatctt tatccgaaag acgtctacgc
      481 attcacgccc atgggcaaag tcatccagtt gccgcgcggc gcgaccaccc tcgatttcgc
      541 gtacatgatt cactcggagg tcgggaacac ttgttccggc gcacgcatca acacccggat
      601 ggtgccgctg cgcacgcaaa ttcagaacgg cgacgtggtt gagattctta cgagttcgaa
      661 cgcgcacccg tcgcgggact ggctgaattt cgtcgtcact tcccgcgcgc gcaaccgcgt
      721 ccggcactgg gtcgcggatc agcaacgcgc cgagtcgatc gaaatcggcc gcaagctatt
      781 tgaaaaggaa gcgagccgct ttcaaatacc cttcaagaaa cttttgtccg acagtaacgg
      841 cgacctgaaa cggatcgccg gcgaatacgg ttacgggcgc acggacgatc tgctggcagc
      901 gatgggctat ggcaagatcg tgccgcgtaa cataattgcg aagtacctgg ggcctgaaaa
      961 attcgaggcg ctggcccaac agaaagaatc gaaattgcgg agcggcgtgc gcgcggtgcg
     1021 acggttgctc ggcggcgatg gcgcgatcgt cgttcgcggg gttgaggatt tgatggtaaa
     1081 ccgcgcccgc tgttgtaatc cgcttcatgg cgaggacatc atcggctaca tcacacgggg
     1141 caagggcgtg gcggtgcata ccaagcgttg caagaacgtg caacaactca tgattaaccc
     1201 cgaacgaatc gtgaacgttg aatgggcttc gcggcctgag aagacggcct atgccgtgaa
     1261 attattggcg acgacggaaa accggaccgg catgattgcc ggcatcaccg gcgcgatttc
     1321 ggacatgaga accggcatac gtgacgcccg cgcatcgatt gggcctgatc aaaagggccg
     1381 catcgaagtg accgtggaag tttttgacgt gaagcacctg gacaaggtga caagctcaat
     1441 caagagcgtg cccggcgtgc tggatgtcga acgccttcag ggagcggtct agaaagcagg
     1501 cggcagaaag cagaaggcac tggccaccca gttttctgcg ttctgctttc tgcctactgt
     1561 ttcttgttgc cttccgtatc gtaaaactca atctgttccg catagtcccg catctgactt
     1621 tcaacttcgg cggcatcgcc aactacgacg atcacggcac ggtccggcgt gacgtgttgc
     1681 tgtgcgacgc gctgcacctc ctccgccgta accgcattca ccttatcgcg atacgtgtgg
     1741 agatagtcgg atggcaattc atacatcctc actccggtaa gttgatcgat caggccatcc
     1801 tgagtctcaa tgcgaatcgg gaaaacgcca gtcagatagg acttcgcatt ccgcaattct
     1861 tcatccggca cgcgctcgtt acgaatccgg tcgagttcaa cgaagaactc atgcagagac
     1921 gcgcccgtaa ccggggttcg cacctcggcg gacacgcgga aactaccggc caggcggcgc
     1981 gcgtccacac ttgaatacgc gccgtacgta tagccctttt cttcgcgcag gttcatgaag
     2041 aggcgcgacg aagcattggc cccaagcacc gtatgcatca ccagcatggg gaagtaatcc
     2101 ggactggtgc gcgcaatgcc ggcattcgca atgacgatgt tcgactgtgc cgaacccggg
     2161 cgatctacca gataggcctt ccgcgcggag agttgcggca gggcgggaaa gtttgattgc
     2221 gccagagttt cgcgtttcca cgcgccaaat agtttttcga gtttcgcgac gatctcatcg
     2281 acttcaatgt ctccgacagc cagcagcact gcgttgttcg gcacgagtcg cgagcggtga
     2341 aagtcaacga acatgtcgcg actcatgcca tccagggatg cagaggtcgg cgagatacgt
     2401 gcgtaaggat gatcaccaaa catcactttc gcggcccgtt cagacgcgag gaagtttggt
     2461 tgggcccgct gttggatgag catctgcttt gtgttctcgc gcgccaaatc aatttcgttt
     2521 tgcggaaagg aaggacgcag agttacgtcg gccatcaact cgaggatctc atcgacgtac
     2581 tgcgataatg cagacgctcc cacggtcaca aagtctgaac ctgagttgac actcaacgtc
     2641 gcgccgagtc gctcaacctc ttcggcgatt tgcacgcttg tccggctcga agttccttcg
     2701 ctcatcaggt gggacatcat gtcgctcagg cctgggaggt ccggcggatc attcgagtcg
     2761 ccgccgacaa atgccaaacg aaagctgacg atcggcagac gggtgtcgct cacaacggcg
     2821 acccggagtt cgttagcgag cgttagttcg accggcgcgg gaatattcag tggacgcgac
     2881 tggagcggcg gcggactttg acgacgaaat gtttctggag gctgagcggc gttaggaatt
     2941 tcggaagcag ttggcacgga atcaactcac gacttcaatt ggatttgatt actagagaat
     3001 cttatccaac cgcgccgcga gttgtgttgt caagttggca ttaggatcca tgccgcccat
     3061 tgaggccgca atgtttcctt gtttgtcgag aatgacgacc gacggcaact gatcgacgcc
     3121 catctttcgt gaggcaacgc cgtcgggatc gcgcagaatc gtgactttgt acttgcgcgc
     3181 gagatcgcgc agttggtcat cgggaacgta gttcttggat ttcggattgt ccgaatcgac
     3241 gctcacccaa taaaccgcga cgccttttcc ggcatattga tccgcaagct ttttcacgcc
     3301 ttcgagttgt gtgcgggtca aaggcaacca tgacgtgccg aaggccatga ccgcgacctc
     3361 gcctcgcagg ctctgagacg tcacggactc gccgtcgatg gcccgcatag aaaactcgac
     3421 ccctccgccc tgcgcgaagg ttgcagacgc gaaactcagc gcaaaaataa acaccgcaat
     3481 agcggtggcc tttcgggtga tggttaacat ctcgtttcct ccgccgtcgc cggggacggg
     3541 tgacagggac ttagatgagg cgtttcggtt tgccgttggt cgcccccttt aggtctgtga
     3601 tttcctcagg ctttcggcca aaaacgtcct cgtgcagggc gcagtaatct tcccacgtgt
     3661 ccatgtcccg tgcaacaaag ggcgaagcga cgggcagccg gagcacgtcc gctcgatgtt
     3721 tgttgaagaa gccgcgcagg ccggcgtcag aatcaaggcg tttcagttcg tcgcgatagc
     3781 tgaggtcgat aaggaccgga tgtccgccct tcccctggaa ctcaggctgg atgagctttg
     3841 cgcc
//
LOCUS       DATDBY010000238         2338 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_836064, whole genome shotgun sequence.
ACCESSION   DATDBY010000238 DATDBY010000000
VERSION     DATDBY010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_836064"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..573
                     /locus_tag="VIT19_04450"
     CDS             <1..573
                     /locus_tag="VIT19_04450"
                     /inference="COORDINATES: protein motif:HMM:NF014788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HEY5838264.1"
                     /translation="MLGLIEDVKRVIQPGFKKEGDVIALLGVTRDDGQVPALDLQREL
                     AVQAACLRAAEAGLLRSAHDCSEGGLAVALAESCFSSLNRDAIGAQISLESGSAGSAG
                     ILPASVLFSETPSRIIISFDESARSEIEAIAKDTGSPITILGTVGGDRLRIKVGEQEV
                     VNSRAAEIEAVWRSSLKLKLQAEAMVAGAE"
     gene            complement(584..>2338)
                     /locus_tag="VIT19_04455"
     CDS             complement(584..>2338)
                     /locus_tag="VIT19_04455"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HEY5838265.1"
                     /translation="RILLRAGREHATAFEFYQNDAGKVKELKAWLIRATGAVKKYGKD
                     ETIDAVEDPNDIYNQSRLKMISASDDADAGAIFAYQSTTEERTIFSQEVWQPQYRLPL
                     LSSRYVLTLPQGWAAKSLTFNHAPITPTVSGSTYTWELNNLPPIASEPNSPRVSSLAP
                     RVAVSFYSPADKPSPNFRTISNWSQVSYWLSELHDPQSQPNEAIAAKTRQLTANAQTE
                     LEKIRAIASYVQSIRYIAIAIGVNRGGGMKPRTAAEVFAKGYGDCKDKANLMRAMLKV
                     LNITSYPVGIYSGDPDYVRDEWASPNQFNHCIIAIKVGDETQVATVVSHPTLGRLLVF
                     DATDEVTLVGDLPDHEQGSWALIVAGESGSLLRMPVTPVESNLLERRIEANLSPDGSL
                     EATIREKANGRWASGYRGAFRQSSRADYQKVIEGWISSGATAAKVNKVEPRDDTTAGN
                     FNLDIDFTAPSYGQLMQERLLIFKPAIVSRRESLSLTDAKRKHPVVLTSNAYSETLNL
                     KLPAGFAVDELPDAVKLDTTFGSYATKYEVKDGHLLFTRKLVQKAGTIPVEQYAAVRT
                     FFEKIRAAEQSPVVLAKK"
BASE COUNT          456 a          656 c          694 g          532 t
ORIGIN      
        1 atgcttgggc tgatcgaaga cgtgaagcgg gtgattcaac ccggcttcaa gaaggaaggc
       61 gatgtcattg cgctgctcgg ggtgacacgg gacgacggtc aggttccggc gctcgatcta
      121 cagcgcgagc tagccgttca agccgcttgc ctgcgcgccg ccgaagccgg cctgcttcgt
      181 tcggcccatg attgttccga aggcggttta gcggtcgccc tcgccgaaag ctgcttctct
      241 tcactgaacc gagatgcgat tggcgctcag attagtctgg agtctggttc ggccgggagc
      301 gcgggcatcc tgcccgcatc ggtgttgttc agcgaaactc cttcacgcat catcatcagc
      361 tttgacgaat cagcccgcag tgaaatcgaa gcaatcgcga aggacacggg ttctcccatc
      421 accattctcg gcactgtcgg aggagatcgt ttgcggatta aggttggcga gcaggaagtc
      481 gtgaactcgc gagcggccga gatcgaagcc gtctggcgct cctcactaaa gctgaaattg
      541 caggccgaag caatggtggc cggggctgag taaccccttc ggattacttc ttcgccagaa
      601 ccaccggcga ttgttcggcg gcgcgaatct tctcgaagaa agtacggacg gcagcgtact
      661 gctcgacggg aatggttccc gctttttgca ccagcttgcg cgtgaagagc agatggccgt
      721 ccttcacttc gtacttcgtg gcatacgatc cgaaggtcgt gtcgagcttc actgcatccg
      781 gtaactcatc gacggcgaat ccggccggca gcttcaggtt caaagtttcc gaataggcat
      841 tcgaagtaag caccaccgga tgcttgcgct tcgcatcagt cagtgacagt gattcgcggc
      901 gcgagacgat cgcgggtttg aagatcagca ggcgctcctg catcagttgg ccgtaagacg
      961 gcgcggtaaa gtcgatgtct aaattgaagt tacccgccgt cgtgtcatcg cgcggttcga
     1021 ctttgtttac cttcgccgcg gtggcgccgg agctaatcca gccctcgatt actttctgat
     1081 aatcagcgcg agaagactgg cgaaacgcgc cgcgataacc tgaggcccag cgcccgttcg
     1141 ctttttctcg aatggtcgct tccaatgaac catcgggcga cagatttgct tcgatgcgtc
     1201 tctcgagcag attgctttcg accggtgtta cgggcattcg cagcaacgaa cctgactcgc
     1261 cggcaacgat tagtgcccaa cttccctgtt catgatcggg aagatcgccg accagcgtaa
     1321 cttcatcggt agcatcgaac acgagcagcc gcccgagtgt cggatggctg acgacggtcg
     1381 cgacctgcgt ttcgtcgccc accttgatcg caatgatgca gtgattgaac tgattcggcg
     1441 acgcccactc gtcccggaca taatccgggt cgccggagta aatgccgacg gggtacgaag
     1501 tgatgttcag caccttcagc attgctcgca tcaaattggc tttgtctttg cagtcgccgt
     1561 agcctttggc gaacacttcg gccgccgttc gcggtttcat gccgccgccg cgatttacgc
     1621 cgatcgcgat cgctatatag cgaatgctct gcacgtacga agcgatcgcg cgaatctttt
     1681 ccagctcagt ctgcgcattg gccgtcagtt gacgagtttt cgcggcgatc gcttcattgg
     1741 gttgtgattg cggatcgtgg agttcactta gccaataaga gacttgagac cagttggaga
     1801 tcgtcctgaa gtttggagac ggtttgtctg cgggtgaata gaagctgacc gcaacccgcg
     1861 gggccaggct cgagacgcgc gggctgtttg gctcagacgc aatcggcggc agattgttaa
     1921 gctcccaggt gtatgtcgag ccgcttacgg tgggagtaat tggcgcgtga ttgaaagtca
     1981 ggctcttggc tgcccagccc tgcggcagcg tgagcacgta cctcgacgag agcagcggca
     2041 gtcgatattg aggctgccaa acctcctgcg aaaagatcgt gcgctcttcg gtcgttgatt
     2101 gatacgcaaa gatggcgccc gcatctgcat cgtctgacgc gctgatcatc ttgaggcgcg
     2161 actggttgta gatgtcgttg ggatcttcga cggcgtcgat cgtttcgtcc ttgccgtatt
     2221 tcttgacggc gccggtcgcc cgaatcagcc aggcctttaa ttccttaacc ttgcctgcgt
     2281 cgttctgata gaactcgaaa gctgtggcgt gctcgcgccc cgcacgcagc aaaatgcg
//
LOCUS       DATDBY010000239         2439 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2676511, whole genome shotgun sequence.
ACCESSION   DATDBY010000239 DATDBY010000000
VERSION     DATDBY010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2439
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2676511"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1661
                     /locus_tag="VIT19_04460"
     CDS             <1..1661
                     /locus_tag="VIT19_04460"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEY5838266.1"
                     /translation="SGIGGSFFGLHYATNNLFGRGEVLSIDIAAGNRQRSFSFSFTEP
                     YIRNRPITAGFSLFATSQKFFGEGTALSSNLEAQQGLFGSALDFAQASSENLFTRESY
                     GVSVFASSPLSEFYRKRPFTQFSRVGLSYLFSMSSTKDPEVNQSGQADAFIPIVYRQP
                     NIITSRITGTFVYDVRDYKGGIDATSGRSLSVGLAFAGLLGDVRTYQPTVEFTQFYPI
                     RNKKSNNPHVFAFRIQAGTVGAFAISDKVSGANSLAFVAGVPVYERYFLGDEFSIRGY
                     PPRGISPFYPLDTYITSRNVTLATNPTGPAVSAGLPSQLALVGLFTGPEGNNVAQLNR
                     NYFRLGGDTQLLGNFEYRIPIFGSTVSAALFADIGSSFNWRTSGDQAFSSEFLADSPF
                     LQTVGALACPRFSGGFIPGGGVTLSAIALCKNPQLATSPFLSLVARDNRIVTQTELDD
                     NQIGIIVPLTQLPPGFQPVYLRGEAQTTTVARLGESKFGKIGDFHTSIGGELRVQVPV
                     LNVPFRLIYAYNPRARGDFQIIDNVPFIFNEKKTTFRFSVGRTF"
     gene            1771..2415
                     /locus_tag="VIT19_04465"
     CDS             1771..2415
                     /locus_tag="VIT19_04465"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEY5838267.1"
                     /translation="MKVIRATAAVAFFAALMVASVSAQTRPAAGTGTQPRPAATPGAT
                     APSTVSVPDSKVALIDSSAFADEKQGIAKFVSALKRVNAEFQPRQTDLQNLQQQIEKA
                     KSDLQKAAPVQDAKVTQQQQDRIAVMETDFKRKGEDAQAAFNKRLEEVLGPIYEDIGK
                     ALDGFAKARGITLILDVTKVQGIVSAADAMDITRAFIAEFNSKNPATASLTPPK"
BASE COUNT          509 a          692 c          687 g          551 t
ORIGIN      
        1 tatcgggcat cggcgggtcg ttctttggtc tgcactacgc gacgaacaat ctgtttggtc
       61 ggggcgaagt gctttcaatt gatatagcgg cgggcaatcg ccagcgcagc ttcagcttct
      121 cgtttaccga accgtacatc aggaaccgtc cgattaccgc gggcttttct ctcttcgcaa
      181 cttcgcagaa gttttttggc gaggggacgg cgctgtcctc aaatcttgaa gctcagcaag
      241 gcctgttcgg ctcggctttg gacttcgcgc aggccagttc agaaaacctt ttcacccgcg
      301 agtcttacgg cgtttcagtc ttcgcgagtt ccccgctgtc tgagttctat cgcaaacggc
      361 cgttcactca gttttcgcgc gtcggacttt cgtacctgtt cagcatgtca agcacgaaag
      421 atccggaggt taaccagagc ggccaggcgg acgcgttcat tcccatcgtt taccggcagc
      481 cgaacatcat caccagccgc attaccggaa cgttcgtcta cgacgtgcgc gattacaaag
      541 gcggcatcga tgcgacatcg ggccgttcgt tgtcggtggg attggccttc gccggattgc
      601 tcggggacgt tcgcacgtat caaccgacgg ttgaattcac tcagttttac ccgatccgca
      661 acaagaagag caataatccg cacgtcttcg cattccgcat tcaggccggc accgttggcg
      721 cattcgcgat ttccgataag gtcagcggcg ccaactcgct ggcgtttgtt gccggcgtcc
      781 cggtttacga gcgctacttc ctcggcgatg agttttcgat tcgtgggtat ccaccgcgtg
      841 gtatcagccc gttttacccg ctcgacactt atataacttc gcgaaacgtt acgctggcca
      901 ccaacccaac cggcccggcc gtgtccgcgg gactgccgtc gcagttggct ctggttggat
      961 tgttcaccgg gcctgaggga aacaacgtag cgcagctcaa ccgaaattac ttccgcctgg
     1021 gtggcgacac ccagctgctc gggaattttg agtatcgcat tccaatcttt ggtagtacgg
     1081 tttcggcggc cttgtttgcg gacatcggat catcctttaa ttggcgcacc agtggcgacc
     1141 aggctttttc cagcgaattt ctggccgact ccccattcct gcaaaccgtt ggcgcgctgg
     1201 cttgtccacg tttctccggc gggttcattc caggcggcgg ggtgaccctg tcggccattg
     1261 ctctctgcaa gaatccgcag ttggcgacgt cgccatttct tagcctcgtg gcgcgtgata
     1321 accgtatcgt tacgcagacg gaactcgacg ataatcagat tgggataatt gttccgttaa
     1381 cgcagcttcc tccgggattt cagccggtat acctccgcgg cgaggcgcag acgacgaccg
     1441 tcgcgcgttt gggcgagagc aagtttggta agatcggtga ctttcacacc agtatcgggg
     1501 gcgagctgcg ggtgcaagtg ccagttctaa acgtgccttt tcggctgatt tatgcgtata
     1561 atccgagggc gcgcggcgac ttccagatta ttgacaacgt tccgtttatc ttcaacgaga
     1621 agaagaccac gtttcggttt agcgtcggac gcaccttcta gtctgaaaac gccaacgctt
     1681 aagctgctgg ggcaaaccaa tccggcgatc aggacaacta agttttcagc tcagatcgcc
     1741 tcttgaattt aaggagtagt acgacaggtt atgaaagtaa ttcgtgcgac agccgcggtc
     1801 gcttttttcg cggcattgat ggtcgcttcg gtttcggcgc agacgcgccc agccgccggc
     1861 accggcacac aaccgcgtcc agccgctacc ccgggggcga ccgctccatc aacggtcagc
     1921 gttccggata gcaaggtcgc tttgatcgac agctcggcct ttgctgatga gaagcaaggc
     1981 atcgccaagt ttgtcagcgc attgaaaaga gtgaacgctg agtttcagcc gcgccagacc
     2041 gatctgcaga acctgcaaca acaaatcgag aaagctaaaa gcgatttgca gaaagcggca
     2101 ccggtgcagg acgcgaaggt aacccaacag cagcaagaca gaatcgccgt gatggaaacg
     2161 gacttcaagc gcaagggtga agacgcgcag gcggctttca acaagcgtct tgaggaagtc
     2221 ctgggcccga tttacgagga catcggcaaa gcgctcgatg gttttgcgaa ggccaggggc
     2281 attaccctaa tcctggacgt cacgaaagtt cagggtatcg tgagcgcggc ggacgcgatg
     2341 gatattacgc gcgccttcat tgctgaattc aacagcaaga acccggcgac cgcgtcgttg
     2401 acgccgccga agtagccgca gcctgatgaa cagaaccag
//
LOCUS       DATDBY010000240         2730 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_783768, whole genome shotgun sequence.
ACCESSION   DATDBY010000240 DATDBY010000000
VERSION     DATDBY010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2730
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_783768"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1179)
                     /locus_tag="VIT19_04470"
     CDS             complement(<1..1179)
                     /locus_tag="VIT19_04470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEY5838268.1"
                     /translation="MTKRIRNKSGAALILIVLAVVLAASFASPIEGAGQRRPQKPKTP
                     PKPKIDYKNFSHTTHVVTQKLACNSCHKVPSKNWNVVRKGDAAFADVTDFPEHSACLE
                     CHRTQFFARERPAPAICSNCHIAVTPRDTARWVFPSLGDLSDPLLKRRDAPSEFGVGF
                     PHDKHIDVVGMNVPGHRARELFVSASFQQKKPAPPKSCPVCHTTYQPQGNSSEEYLTK
                     PPKDVGDNFWLKKGTFKTIPNSHAGCFECHSADSGIAPEPKNCETCHKLLAPAPLKTD
                     FDLKLAATMGADKVMLSRWGQRISSGAFRHEGGEHPDLSCLNCHNVESATFSTVDAKT
                     MKVAIKSCGGADGCHITQTADDGGALNYEIASKQKDSKFVCTKCHVTFGKEAMPVSHP
                     Q"
     gene            complement(1226..2383)
                     /locus_tag="VIT19_04475"
     CDS             complement(1226..2383)
                     /locus_tag="VIT19_04475"
                     /inference="COORDINATES: protein motif:HMM:NF016103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HEY5838269.1"
                     /translation="MRKTVCLLIALLLTSTPAFAQPGQSPSPDSKKLVAYLKSHGMFP
                     ENYVVSKFRNHDIVFLGEYHRIKHDVELIHKLIPRLYKAGIYNLGIEFGCYEHQDKVD
                     QLITADSYDENMARWLMFQQLSSWGYKEYEDIYRVAWQLNRSLPKRARKFRVVNLGYR
                     PNWPARKEEMTSADWDKVWWNGDPDQHMAGVVIKEFVNKGRKALIYSGNRHAFTQYHQ
                     PIYDFEKKQFIRFNTTRMGNLVFNKIGYRAFNIYLHAPWESSTNPNVDTRPVHGVIDD
                     VMAKFDNRRIGFDVKGSPFGAISDTTSYYSLGHANFTLDKYCDGYIFQGRLQDYEGVT
                     VDPLFVTDTNLEEAIAYLANPAFRKRVKKPEDLIGAMRRSADMKSRFKDVK"
     gene            complement(2376..>2730)
                     /locus_tag="VIT19_04480"
     CDS             complement(2376..>2730)
                     /locus_tag="VIT19_04480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838270.1"
                     /translation="DELILGIHKSTDILDLAERKGMEVSKPKFELKSATDALTHARVL
                     IHSSSTVEVDKVVGPGLEAANKGYQAGESALAELSFRRKGLAVSLVFILFLAGLVYLK
                     IRQIERRQARGYDHA"
BASE COUNT          585 a          745 c          716 g          684 t
ORIGIN      
        1 ctgcggatga ctgacaggca tcgcttcttt cccaaacgtc acgtgacatt tcgtgcagac
       61 gaacttcgaa tctttttgct tactggcgat ttcgtaattc aacgcgccgc cgtcatcagc
      121 cgtctgggtg atatgacagc cgtcagcgcc gccgcatgat ttgatcgcca ccttcatcgt
      181 tttcgcatcg accgtgctaa acgttgcact ctcgacgttg tgacagttga ggcagcttag
      241 gtcgggatgt tcgccgcctt catgccgaaa agcgccggac gaaattcttt ggccccaacg
      301 tgacagcatg actttgtccg cgcccatcgt ggcggccagt ttcagatcga aatcagtctt
      361 caacggcgcc ggcgcgagca gcttgtgaca cgtttcgcag ttcttcggct ccggcgcgat
      421 tcctgagtcc gcactgtgac actcgaagca gcctgcgtgg ctattcggaa ttgttttgaa
      481 agtgcctttc ttcagccaga agttgtcgcc aacgtcctta ggcggcttcg tcaagtactc
      541 ttcgcttgag ttgccctgtg gctgatacgt agtgtgacag acaggacaac tcttaggcgg
      601 cgcgggcttc ttttgctgaa atgacgcgct cacaaacagc tccctagcgc ggtgccctgg
      661 cacgttcatc ccgacaacat cgatgtgctt gtcatgcgga aagccgacgc cgaactctga
      721 cggggcatcg cgtcttttta gtagcggatc actgagatcg cccaaacttg ggaacaccca
      781 gcgcgcggtg tccctgggtg tcacggcgat gtgacagttc gagcagatgg ccggcgcggg
      841 ccgctcgcgg gcaaagaatt gtgtgcggtg acactcgaga cacgccgaat gttctggaaa
      901 gtctgtgacg tccgcaaagg ccgcgtcgcc cttgcgcacg acgttccaat tcttcgaagg
      961 aactttgtgg caggaattgc aggccagctt ttgcgtcacc acatgcgtag tgtgcgagaa
     1021 atttttgtaa tcgattttcg gctttggcgg agtttttggt ttttgcggcc gtcgctggcc
     1081 tgcaccttca atcggagacg cgaaggaagc agcgagcacg accgcaagga cgataagtat
     1141 taaggccgcg cccgacttat tacgaatcct tttggtcatc gtctctggtt ttttgcgccc
     1201 aacgaggtga ttaaaacctg ccagctcact tcacatcttt gaagcgagac ttcatatctg
     1261 cggatcttcg catcgcgccg attagatctt ccggcttctt cactcgtttc cggaaagcgg
     1321 ggttcgccaa atacgcgatg gcctcttcca aatttgtatc agtaacaaat aatggatcaa
     1381 ctgtcacgcc ttcatagtcc tggaggcggc cctggaaaat atatccgtca caatatttgt
     1441 ccagggtgaa gttcgcatgg cccagtgagt agtacgaggt cgtgtcgcta atcgcgccga
     1501 agggcgaacc ttttacatcg aacccgatgc gcctattgtc gaacttcgcc atgacatcat
     1561 cgatgacgcc atgcacggga cgggtatcta cgttcggatt cgtactcgat tcccaggggg
     1621 cgtgcaggta aatattgaag gcccgatagc cgatcttgtt gaagacaaga ttccccatcc
     1681 tcgtggtgtt gaaccgaatg aattgtttct tctcgaaatc atagattggc tggtgatatt
     1741 gcgtgaaagc gtgacgattg cccgagtaaa tcaacgcttt ccggcctttg ttgacgaact
     1801 ctttgatcac gacgccggcc atgtgctggt ccggatcgcc gttccaccaa accttgtccc
     1861 aatcagcgga ggtcatctct tcttttcgcg ccggccaatt tggccggtag cccaggttca
     1921 ccacgcgaaa cttccgggcg cgctttggca aagatcgatt tagctgccac gcgacgcgat
     1981 aaatgtcctc gtactcttta tagccccagg aagatagttg ttggaacatc aaccagcgcg
     2041 ccatgttctc gtcatatgag tcggcggtga tgagctgatc gactttgtcc tgatgctcgt
     2101 aacaaccgaa ctcaattccc aaattgtaaa tgccggcttt gtagaggcgc ggaataagtt
     2161 tgtgaatcag ctcgacatcg tgcttgatgc gatgatattc acccagaaaa acaatgtcgt
     2221 gattgcgaaa tttactgacc acataatttt ccggaaacat tccgtgggac ttcaggtacg
     2281 caactaattt cttgctgtct ggtgaaggcg actggcccgg ttgagcgaat gccggcgtgc
     2341 tcgtgagcaa cagtgctatg agcaagcaaa ctgtcttacg catgatcgta tccccgtgcc
     2401 tggcgacgct cgatctggcg aatcttaaga taaacgagcc ccgccaaaaa caaaatgaaa
     2461 acgagcgaaa ctgcgagacc ctttcgcctg aaactcaatt ctgcgagcgc gctctcgccg
     2521 gcctggtagc ctttgtttgc ggcctccaac ccgggaccga ctactttgtc cacttcgacc
     2581 gttgacgagc tgtgaatcaa cacgcgcgcg tgcgtcagcg catcggtcgc gcttttcaat
     2641 tcaaacttgg gcttgctgac ttccatgcct ttccgttccg ccaggtccag gatgtcagtc
     2701 gatttgtgaa tgcccaggat caattcgtcg
//
LOCUS       DATDBY010000241         3921 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_10841, whole genome shotgun sequence.
ACCESSION   DATDBY010000241 DATDBY010000000
VERSION     DATDBY010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3921
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10841"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VIT19_04485"
     CDS             <1..310
                     /locus_tag="VIT19_04485"
                     /inference="COORDINATES: protein motif:HMM:NF014019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YbjQ family protein"
                     /protein_id="HEY5838271.1"
                     /translation="NFRILQNLGVVRGIVVRSRNVFATIGAQLQTIVGGNITVWTKLC
                     EQTRSDAFEIMIQHASEIGANAVVGARYDTTEVSSGVTEVLAYGTAVIVEPTDSSYRE
                     "
     gene            307..723
                     /locus_tag="VIT19_04490"
     CDS             307..723
                     /locus_tag="VIT19_04490"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF025892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEY5838272.1"
                     /translation="MSNTDREASRLERARNAFDKVAYARFLGLELCELKSGDVTVCLD
                     VRDEVKQNHGVVHGGAIASLIDTASAFVILTAIDENERVTTTDLTIHYLRPVTLGRML
                     ARARIVRGGRRRFVVNVEVENAGGLAATAVTGYMKI"
     gene            881..2509
                     /locus_tag="VIT19_04495"
     CDS             881..2509
                     /locus_tag="VIT19_04495"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing diguanylate cyclase"
                     /protein_id="HEY5838273.1"
                     /translation="MAQHTRQLTPVRCAHSTISQLHRYFEDVVLENNLSALVIESLPY
                     APKRSAREIARVRDLARAGRRTFFFVGSTDDVAESIEGAAPLSNCIAPVLLHTGPGQV
                     KEHFVVIADARFSALLATVRNDDDSGEDEVVWTFEPDIVYSALEYLMARVQAEQPYQA
                     TAFENAVKTSMPKATSLQLTLSVTTKLAHLLQEQAGREIAVNRIATAIRESLELGVIL
                     QKTVTEVGSALNVACCALRVEGQTEVQALSYSYFADAEKEAKLKRDEVTKALDELCST
                     IARNPEIFVRDGSEISDGLRAEFPLAVVPLVFQERFIGALEVVDDNTSRTWQENEILL
                     LRTVANQLSVAINHAGLYAQMQQQALTDSLTGCYNRRSFEMQFDRELQMATRLNQPLS
                     LLMLDLDRFKQLNDTVGHDAGDDALRKLAECFQEVLRGVDTPCRFGGDEFALILPQAY
                     ADGATVVAERLRTSIEQIEIPGFGHLTASIGIAAYPLHGASRAALVSAADMALYSAKR
                     AGRNRVAVFDAPEDGAAELFASRRHLSETIEHAM"
     gene            2650..>3921
                     /locus_tag="VIT19_04500"
     CDS             2650..>3921
                     /locus_tag="VIT19_04500"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEY5838274.1"
                     /translation="MDDIRRLAHFFRPYKWSLIFGIACIVAGVIFNVAIPQIVGRALD
                     ENWDQVTWSKLNIAALKVLGASAMSGLFLFLQRRILIGMSRNIEYDLREDFYSRLVNQ
                     PLSFFHEHRTGDLMARATNDLSAVRQLAGPMIMYSLQTVFVVLFILPIMFALSWKLTL
                     LLFVTMPLVSLTVKFFGQQVHMRFQHIQDFFAQITARAQENITGVRVVRAYAQENAEI
                     EAFNKLNWEYAQKNLGLVRIDAVMRPLMTFLIGLGFVLILWAGVPLAVRGELTVGEFT
                     QFNMYLFRLIWPLIAIGYVVNVYQRGMASWKRMRAVARVKPAITDLPQVKEQLPIKGR
                     IEFRDLTFRYHANAPEVLRDISLTIEEGQTVAFVGRTGSGKSTLVNLIPRVIDAPEGS
                     VFIDGVSVRDYPLNQLRSAVGYVPQETFLFSD"
BASE COUNT          796 a         1090 c         1147 g          888 t
ORIGIN      
        1 caactttcgc atcctgcaga atcttggcgt cgtccgcgga attgtggtcc gctcgcgcaa
       61 tgtctttgcc acgattggcg cccagcttca gacgatcgtg ggcgggaaca tcacggtgtg
      121 gacgaaactc tgcgagcaaa cgcgctccga tgctttcgag attatgattc agcacgcgtc
      181 tgagattgga gcgaacgccg ttgtcggcgc ccgttacgac acgactgaag tctccagcgg
      241 cgttaccgaa gtcctggcat acggcactgc ggtgatcgtc gaacccactg actcgagcta
      301 ccgcgaatga gcaacactga ccgtgaagct tcgcgacttg agcgcgcgcg taacgccttt
      361 gacaaagttg cctatgccag gttcctcggc cttgagttgt gcgagttgaa gagcggtgat
      421 gttactgtct gcctcgacgt tcgcgatgag gtgaaacaga atcatggagt cgttcacggg
      481 ggcgccatcg cctcgctgat cgacaccgcg tcagcgttcg taatccttac ggccatcgac
      541 gaaaacgagc gagttacaac caccgatctc actatccatt acctgcggcc ggtgactctc
      601 gggcgaatgc tggcgcgcgc cagaatcgtg cgcgggggac ggcggcgatt cgttgtgaac
      661 gtggaagtcg agaacgccgg ggggttggcc gcgaccgcag taaccgggta catgaagatt
      721 tagcaacaaa aacaggcaga aaaggcctga aaactgcgga aaatagccat agacaaggcg
      781 ctccgcaaaa tgccaaaatg gttttggcct gcttctcgtc ccgaagcgtc cagcttccta
      841 ccggtggtcc tttcctatgc attcactgtt tgacgctctt ttggcacagc acactcggca
      901 gttgacacct gtccgctgtg cccactcgac gatttcccag cttcaccgat attttgagga
      961 cgtcgtgctc gagaacaatc tcagcgcgct ggtgatcgaa agtttgcctt atgcgccgaa
     1021 gcgttccgcg cgagaaatcg cgcgggtacg ggacctggcg cgcgcgggcc gccgcacttt
     1081 ctttttcgtt gggtccaccg atgatgttgc ggaaagcatc gagggtgccg ccccattaag
     1141 caattgcatc gcacccgtgt tgttgcacac cggccctggt caagtgaaag aacacttcgt
     1201 cgtgatcgct gatgctcgct tctctgcgtt gctcgcgact gtgcgaaacg atgatgattc
     1261 aggcgaagac gaagtggtgt ggacgttcga acccgacatt gtctattcgg cgctggagta
     1321 cctgatggcg cgggtccagg ctgaacaacc ctatcaagca acggcttttg aaaacgcggt
     1381 gaaaacctcg atgccgaaag cgacgtcgtt gcaattgacg ttgagcgtca ccacgaaact
     1441 tgcgcacttg ctgcaggaac aagccggccg cgaaatcgcg gttaaccgca ttgccacggc
     1501 gattcgcgag tcattggaac taggcgtgat cctgcaaaag accgtcaccg aagtcggctc
     1561 ggcgttgaac gtcgcgtgtt gcgctttgcg cgttgaaggt cagacggaag tccaggcgct
     1621 gagctactct tattttgccg atgctgagaa ggaagcaaag ctgaaacggg acgaggttac
     1681 caaggctctt gacgagcttt gttcgacgat cgccaggaat ccggaaattt tcgttcgtga
     1741 tggctcagag atttcagatg gtctgcgcgc tgagtttccg ctggcagttg tgccgctggt
     1801 gtttcaggag cgattcatcg gcgcgctgga agtcgtcgat gacaatacct cgcgaacctg
     1861 gcaggagaac gaaatccttt tgctccgcac ggtcgccaac cagttgtcag tggcaatcaa
     1921 tcacgcgggc ttgtacgcgc aaatgcaaca gcaagcgctg accgactcgc tcacaggctg
     1981 ctacaaccgc cgctcgttcg agatgcagtt cgaccgcgaa ttgcagatgg ccacgcgact
     2041 gaatcaaccc ctctcgcttt tgatgcttga tctggatcgt ttcaagcaac tcaacgacac
     2101 ggtcggtcac gacgcgggcg atgatgcttt gcgaaaactg gccgagtgtt tccaggaagt
     2161 gttgcgtggc gtggatacgc cgtgccgttt cggtggcgat gagtttgcct tgatcctgcc
     2221 gcaagcgtac gccgacggcg cgacggtcgt cgccgaacgg ctgcgcacca gcatcgagca
     2281 gatcgaaatc ccgggatttg gccatcttac cgcctcgatt ggtatcgccg cttacccgct
     2341 gcacggtgcg tcgcgagcgg cgctggtttc ggccgcggat atggcgctct acagtgcgaa
     2401 acgcgccggt cgcaaccgcg tggcggtctt tgatgcgccc gaagatggcg cggccgagct
     2461 gttcgcatcg cgccggcatc tttcggaaac aattgaacac gccatgtgag tcgtgatcga
     2521 ggcgcctttg cctgcatgat cgatctcact taaaatttac attcaaagtt ttgcaactga
     2581 tgcctgagtg gttcgcatgt cgaaccgtca ggcttcattt gtatggcagg cgtttttctt
     2641 tcccgctcaa tggacgatat ccgcagactc gcgcattttt tccgaccgta caagtggtcg
     2701 ctgatctttg ggattgcctg cattgtcgcg ggcgtgatct ttaacgtcgc gattccgcaa
     2761 attgtcggtc gggcgctcga cgagaactgg gaccaggtca cctggtcaaa actgaatatc
     2821 gctgcgctga aggttctggg tgcgagcgcg atgagcggcc tgtttctctt cctgcagcgc
     2881 cggattctca tcggcatgtc ccgcaatatc gagtacgacc tgcgcgagga tttctatagc
     2941 cggttggtta atcagccgct ttcattcttt cacgagcacc gtactggcga tctgatggcc
     3001 cgcgcaacga acgatctctc cgccgttcgc caactggccg ggccgatgat catgtacagc
     3061 ctgcaaaccg tctttgtggt gctgttcatt ctgccgatca tgttcgccct gagttggaag
     3121 ttgacgctgc tgctgttcgt gacgatgccg ctggtttcac tgacggtaaa gttcttcggc
     3181 cagcaggtgc acatgcgttt tcagcatatc caggatttct ttgcgcaaat caccgcacgc
     3241 gcgcaagaga acataaccgg ggtgcgtgtc gtgcgggcct acgcgcagga gaatgccgag
     3301 atcgaagcct ttaacaagtt gaattgggaa tacgcgcaga agaatctcgg cctcgtgcgg
     3361 atcgatgcgg taatgcggcc gctgatgact tttctgatcg ggctcgggtt cgtgctaatc
     3421 ctctgggccg gcgtgccgtt ggcggtgcgc ggcgagctga cggtcggcga atttacgcaa
     3481 ttcaacatgt atcttttccg gctgatctgg ccgttgattg cgattggcta cgtcgtcaac
     3541 gtctatcaac gcggcatggc aagttggaaa cgcatgcgag cagtggcgcg cgtaaagccg
     3601 gccatcacag acctcccgca agtgaaagag caactgccga tcaaaggccg catcgaattt
     3661 cgcgacctca cgtttcgtta tcacgccaat gcccccgaag tcttacgcga catcagcctg
     3721 acgattgaag aaggtcagac ggttgcgttc gtgggccgca cgggcagcgg caagtcaacc
     3781 ctggtcaact tgattccgcg cgtcatcgac gcgccggaag gctctgtgtt cattgacgga
     3841 gtgtccgtgc gcgattatcc gttgaaccaa ttgcgcagcg ccgtcggcta cgtgccgcaa
     3901 gagactttcc tgttcagtga t
//
LOCUS       DATDBY010000242         3377 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2875360, whole genome shotgun sequence.
ACCESSION   DATDBY010000242 DATDBY010000000
VERSION     DATDBY010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2875360"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            576..2537
                     /locus_tag="VIT19_04505"
     CDS             576..2537
                     /locus_tag="VIT19_04505"
                     /inference="COORDINATES: protein motif:HMM:NF019239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5838275.1"
                     /translation="MRHPLTLRRSGFGLALLLFVLIAPLTVEAKDNWLRVQTKNFTLV
                     GNASEKDMRQVANRLEQFRMVFGLLLPKAKLNSPVPTTVIVFKSDGAYKPFKVNPNFR
                     GYFQPGDDVNYITLTSEKSADDAHPFRTIFHEYVHLLVKNTMGEGVPLWFNEGLAEYY
                     STFDVQDGDRKVLLGDLVSNHVLYLRDNKLLPLRTLLAVDHKSPYYNEGNKMNIFYSE
                     SWMLMHYLLQGEGQKRRPALGRFIDLLESKVPIADAFQQAFESNIEAFEKSFKSYIQG
                     AKYMATGVTFKNKLDFESEMQSSPLSEAEAQAYLGDLLAHTRRFNDAETYLQKALSLN
                     PDLPMAHASLGMLRVRQHRLAEAKPYLEKAIAKDSQNYLAHYYYALALSGLSTTEYRT
                     MSSYAPETAAAMRTELKKAIALKPDFPESYALLGFVNVVRNEEIDETIELLKRALSTS
                     RANQRILFMLSQLYMRKERFADARQLLEPIAQNSPNPEMRQQAEALLANIKRTEEEIA
                     RFKEFQKEETARQELINQPATDSAVTVEQTVSEDDQNSALADALRQPEAGETRLQGVL
                     TSVECSAKGGVVFHVRAGDRVLKIHSDSFEQVDITTFITDVGGNLSCGPRKPENPIII
                     TFAAAKAGSKFDGEARALEFVPATFVLKK"
     gene            complement(2541..2909)
                     /locus_tag="VIT19_04510"
     CDS             complement(2541..2909)
                     /locus_tag="VIT19_04510"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY5838276.1"
                     /translation="MKHSEGFLKIVNDAKSRIKEVTVAETRERLAANRSGLLIDVRED
                     HEWDAAHAAGAIHLGKGIIERDIEATAPDKSTELVLYCGGGYRSALAADVLQDMGYTN
                     VWSMAGGWKAWQESGAPVES"
     gene            3132..>3377
                     /locus_tag="VIT19_04515"
     CDS             3132..>3377
                     /locus_tag="VIT19_04515"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5838277.1"
                     /translation="MANEQFDVTVIGSGPGGYVAAIRAGQLGLKVAIVEKDKRLGGTC
                     TLRGCIPTKQLLMSAHVYEQMQHAADFGVQATGIQLAF"
BASE COUNT          795 a          904 c          930 g          748 t
ORIGIN      
        1 caaatgtcgg cgagaaaggt gaacgccacg cgaccattgt gatagctggg atagcgaacc
       61 agcttcgcct cgcgggcgaa taccatggac gtgaagctga atacaaatag agctatggca
      121 agcgggtaga gtcttttcat ggtgcttctc ctgtgctgca gcaatgactt ggatgggcgg
      181 gtaaccgccg ccggcttttg cggaatttag accgcggtat ggcgctgaac actgcacagc
      241 attgcgcggt aggcgttcag cctgacggtc gatacgacga accagaggtt atcgcatgct
      301 gaccttagtt tttgaaagag aacggacgat taagatcgat aagacgccgc gagttgcgct
      361 tcggttacac ccagcgaatc cgggaacgcg gggatattaa gaagcgggtc aactcttctg
      421 tcaaggccgg catctgaatg ggttcaaagt cggccgtaga ggattccatt gacgccgcct
      481 ggccggcaac atatagtccc gttcaccgtc gcggtttctt tcctcccgtt ggagatttcc
      541 gctgcgatat ttgctcctta agaggttctc acgacatgcg acaccccctt acgcttcgaa
      601 ggtctggctt tggccttgcg ctgctgctgt tcgtcctgat tgcgccgctg acggtagagg
      661 cgaaggacaa ctggctgcgc gtgcaaacaa agaatttcac gcttgtgggc aatgccagtg
      721 agaaagacat gcggcaggtg gccaaccggc tcgaacaatt tcgcatggta tttggcctct
      781 tgttacccaa ggctaaactt aactcgcccg taccgaccac tgtgatcgtg tttaagagcg
      841 acggtgccta caagcctttc aaagtcaatc ctaatttccg cgggtatttt cagcccggcg
      901 acgatgtgaa ctacatcacg cttaccagcg aaaagtcggc cgacgacgct catccctttc
      961 gcacaatctt tcatgagtac gtgcaccttc tggtgaaaaa caccatgggt gagggcgtgc
     1021 cgctttggtt caacgaaggg ctggccgaat actacagcac gttcgatgtg caggacggtg
     1081 atcgaaaagt tctcctcggc gatctagtca gcaaccatgt gctgtatctg cgggacaata
     1141 agctgttgcc tctgcggacg ttgttagcgg ttgaccacaa atcgccgtac tacaacgaag
     1201 gcaacaagat gaatatcttt tattctgagt catggatgct catgcactac ctcttgcagg
     1261 gggaaggcca gaagcggcgt ccggcactcg ggcgttttat agatctgctg gaatcgaagg
     1321 tgccgattgc cgacgcgttc caacaggcat tcgaatccaa catcgaggca ttcgaaaaat
     1381 cattcaaatc atatattcag ggcgccaagt acatggcgac cggcgtgacc ttcaaaaata
     1441 agctcgactt tgagtccgaa atgcagagct cgccactttc ggaagccgag gcacaggcgt
     1501 atttgggcga tctgctcgcg catacgcggc gcttcaacga tgccgaaacc tatctgcaaa
     1561 aggctctgag tctgaaccct gacctcccaa tggcccacgc atctttggga atgcttaggg
     1621 tgcgccagca ccgcctggcc gaggccaagc cttatctgga aaaagctatc gctaaagatt
     1681 cgcagaacta tctggctcat tattattacg cgctggcttt gagcggcttg agcacgactg
     1741 aataccgaac gatgagtagc tatgcgccgg aaaccgcggc agccatgcgc acggagttaa
     1801 aaaaggcgat tgccttgaaa ccggactttc ccgaaagcta cgccttgctc ggttttgtaa
     1861 acgtggtccg caatgaagag atcgatgaaa cgattgaatt gctgaaacgc gccctgagta
     1921 cttcaagggc aaaccagcgc attctgttca tgttgtccca actctatatg cgcaaagagc
     1981 gatttgctga cgcgcggcaa ctgctcgaac cgatcgccca aaacagtccc aacccggaaa
     2041 tgcgccagca agccgaagcg ctgctcgcaa atatcaagcg caccgaagaa gagatcgcgc
     2101 gcttcaagga gtttcaaaaa gaggaaaccg cgagacagga gctgataaat caacctgcta
     2161 ccgattcggc tgttacagtt gaacagaccg tgagcgagga cgatcagaat tcggctctgg
     2221 ctgacgcgct gagacagccc gaggccggtg aaactcggct gcagggggtg cttacgtcag
     2281 ttgagtgcag cgcgaaaggc ggagttgtct ttcatgttcg cgcgggcgac cgtgtactta
     2341 agattcatag cgattcgttt gagcaggtcg atatcaccac cttcattacc gacgtgggcg
     2401 gtaacctcag ctgcggcccg cgcaagcctg aaaacccaat cattatcacc tttgccgcgg
     2461 ccaaagccgg cagcaaattc gatggcgagg cccgggcgct ggaatttgtg ccggcgacgt
     2521 ttgtcttgaa gaaatagact ttaactctcg accggtgcgc cggattcctg ccaggccttc
     2581 cacccgccgg ccatcgacca gacgttggtg tagcccatgt cctgcaaaac gtcggcggct
     2641 aaagccgagc gataaccgcc gccacaatac aaaaccaact cagtcgattt atcaggcgcg
     2701 gtggcttcga tgtcgcgttc gatgatgcct ttgccgaggt gaatggcgcc ggccgcgtgc
     2761 gcggcgtccc actcgtggtc ttcgcgcacg tcgattagca agccgctccg gttggccgcg
     2821 agtcgttccc gggtttcggc gacggtgact tctttgatgc ggctcttcgc atcgttaaca
     2881 atttttagaa aaccttcaga atgtttcatg gtttttttgg tccaaagtcc gacgtcccaa
     2941 gtccaatgtc cgttaagcca gaccgtcgcg acgttggaca ttagacttgg gactttggac
     3001 ttgtcttagc gccagcgatt ataatgccaa gtttccaaca cacgaaagtt ttccgacgtg
     3061 tgcgaggctg ggtgaagggt cgctcatcac tcattactca tcactcataa ctatctttcg
     3121 aggattcaaa attggctaac gaacaattcg atgtaacagt aatcggcagc gggccgggcg
     3181 gctatgtggc cgcaattcgc gcgggacaat tgggcctgaa agtcgcgatc gtcgaaaaag
     3241 acaagcggct cggcggcacg tgtactctgc gcggctgcat cccgacaaag cagcttttga
     3301 tgtccgcgca cgtttacgaa cagatgcagc acgcggcgga tttcggcgta caggcgaccg
     3361 ggattcaact ggcattc
//
LOCUS       DATDBY010000243         2014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_611246, whole genome shotgun sequence.
ACCESSION   DATDBY010000243 DATDBY010000000
VERSION     DATDBY010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_611246"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..571
                     /locus_tag="VIT19_04520"
     CDS             <1..571
                     /locus_tag="VIT19_04520"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY5838278.1"
                     /translation="HPLGGGTMHNKVVFRAAAALNEAGLITLRVNFRGVGQSTGTHDE
                     GYGEQDDVRAGLDYLAEKYPGQEITLCGFSFGSRVGLEAGLADNRVVRLISIGTPVDK
                     YDFSFLEQCRKPILFVHGEHDEYGDANRLREMVERIAAHTPAELRVIEGAGHFFDNQL
                     DELKRVITEWASEPPAVAGGSVFANNPAD"
     gene            complement(608..1684)
                     /gene="asd"
                     /locus_tag="VIT19_04525"
     CDS             complement(608..1684)
                     /gene="asd"
                     /locus_tag="VIT19_04525"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF006416.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEY5838279.1"
                     /translation="MKPTLSMTNKLRIGILGATGVVGQRFVQLLENHPQFEITALAAS
                     DRSQGKTYAEACTWRLPGEMPEGVQQIVVQPPAPPLDCDVVFSSLPGEIATDAEPEFA
                     RAGFPVISNSSSHRMAPDVPLLIPEVNPHHLELIEAQRTNHEYNRGFIVTNPNCSAIA
                     IVMALAPLHEKFGVTACVVTTMQALSGAGYPGVASLDATDNVIPFIGGEDEKVEIETL
                     KILGGVSQGTIIDADMKVSAQCNRVNVTDGHMASIRVKLARSASLDEVRDALASFRAE
                     PQRLKLHSAPARPVIVRDELDRPQPRLDRDAGNGMSVTVGRIAEDNVLDYRFVALGHN
                     TIRGAAGAAILNAELLAAKEYFDA"
     gene            complement(1835..>2014)
                     /locus_tag="VIT19_04530"
     CDS             complement(1835..>2014)
                     /locus_tag="VIT19_04530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838280.1"
                     /translation="EYGDEMKVAEAGLEQGVVTIPAAAFGEESRGFLRISFCADEERL
                     SEGVRRLGDALKTIA"
BASE COUNT          429 a          576 c          573 g          436 t
ORIGIN      
        1 gcacccgctc ggcggcggca cgatgcacaa caaagtagtc tttcgcgcgg ccgcggcatt
       61 gaatgaagcg ggactgatta ctctgcgcgt caattttcgc ggtgtcgggc aaagtacggg
      121 aacacacgat gagggctacg gagagcagga tgatgtgcgc gcggggctcg actatctggc
      181 ggagaaatat cccggacagg agattacttt gtgcggcttt tcgttcggct cacgagtggg
      241 attggaagcg ggccttgcag acaatcgcgt cgtgcgacta atcagcattg gcacgccggt
      301 cgataagtac gacttcagtt ttctcgagca gtgccgtaaa ccgatcttgt tcgtacacgg
      361 cgaacatgat gaatacggtg acgcgaatcg tttgcgcgag atggttgagc ggattgccgc
      421 gcacacgccg gccgagctac gcgtgatcga gggtgcggga catttctttg ataatcagtt
      481 ggatgagttg aagcgagtaa ttacggagtg ggcgtcagaa ccgcctgcgg tagcgggcgg
      541 gtcagtattc gccaacaatc ctgctgatta gcgaggaacg cccgcccgct accgcaggcg
      601 gttctgacta cgcatcgaaa tattctttcg ccgccagcaa ttccgcattc agaatcgccg
      661 ctcccgccgc gcccctaatc gtattgtgac cgagcgcaac gaagcgataa tcgagcacgt
      721 tatcttcagc aattcgcccg acagtgacgc tcattccgtt tcccgcatca cgatcgagcc
      781 gcggctgtgg ccgatcaagc tcgtcgcgaa cgattaccgg tctcgcaggt gctgagtgaa
      841 gcttcagcct ttgtggttcg gccctgaacg aggcgagcgc gtcgcggact tcatcaagcg
      901 aagctgaacg agcaagcttt acgcgaatcg aggccatgtg cccgtccgtg acgttcacgc
      961 gattgcattg ggcgctcact ttcatgtcgg catcgatgat ggtgccctgg ctgacgccgc
     1021 ccagaatctt cagcgtttcg atctcaacct tctcatcctc gccgccgatg aacggaatca
     1081 cgttgtcggt cgcgtccagt gaagcaactc ccggataacc ggcgccggac agcgcctgca
     1141 tcgtcgtcac cacgcacgct gtcactccaa acttttcatg caacggcgcc agcgccatca
     1201 caatggcaat cgccgagcag ttagggttgg tgacgatgaa tccccggttg tattcgtggt
     1261 ttgttcgctg cgcctcgatc agttcgaggt ggtgaggatt aacttcggga atcagcaaag
     1321 gcacgtccgg cgccatgcga tgcgacgaag aattgctgat cacgggaaat ccggcacgcg
     1381 cgaattcagg ttcggcatca gtggcaatct caccgggcaa gctggaaaag acgacgtcac
     1441 agtcgagcgg cggcgcggga ggctgcacga caatctgctg cacgccctca ggcatctcgc
     1501 ccggcaaacg ccaggtgcat gcttcagcgt aagtttttcc ctgggaacga tccgatgcag
     1561 ccagcgcggt gatttcgaac tgcggatgat tctccagcag ttgcacgaat cgctgaccga
     1621 cgacgccggt tgctccgagg attcctattc gaagtttgtt ggtcatgctc agagtcggtt
     1681 tcattaacac ctcgctttag cgaggtgttt tgctgaagaa agaaagtctc gccagccgtt
     1741 ttaacggctt ccaatgaaaa ccgttgaaac ggttaatgct ctgattgcct ggacgtcgcc
     1801 caccttgctg aagcaaggtg ttaatgagac gtatttaggc gatcgtcttc aaagcgtctc
     1861 ccagtcgccg gacaccctca ctcaaccgtt cctcatcagc gcagaacgaa atccgcaaga
     1921 agccccggct ttcttcaccg aacgccgctg cgggaatcgt cacgacaccc tgctccaaac
     1981 ccgcttcggc aactttcatt tcatcgccgt attc
//
LOCUS       DATDBY010000244         8890 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2711922, whole genome shotgun sequence.
ACCESSION   DATDBY010000244 DATDBY010000000
VERSION     DATDBY010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8890
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2711922"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(159..1832)
                     /locus_tag="VIT19_04535"
     CDS             complement(159..1832)
                     /locus_tag="VIT19_04535"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY5838281.1"
                     /translation="MRECPRCELCYDDEVLLCPDDQAKTKHTLPGTTLLNARYRLEKR
                     LGRGAMGQVYVARDENLITRRVAVKTIRPDVLSDEDLQEGEAIARFEREARTAASVQH
                     PNVIGVTDFGKSEEGVFFLVMEYVEGESLYQLLRREGTIPVQRALTFLRQTCAGVEAA
                     HDEGILHRDLKPANIFIVQKKKKDGTTLAGDDIVKVGDFGLAKIISQSLAGITSGSGP
                     ASRGILGTPEYMAPEQMHAGAVLDARADVYALGAIAYHMLGGRPPFTGEIMQIFAQKL
                     TQETPALSTLRSDIPSAVEKAVMHALTKEADARSATVAEWFHEFDLAVGGASIHEEEE
                     GETRVVVMAPAGAEVYVDDERHGSVGRSGRLILSSIPPGQHVRRIAHAGDKDDERVIE
                     IRQDAEEQIIQAQFKSAASSGLSPSKGGSLGSVSGVDIKTPAIVACAKCGSRFAAGAK
                     FCGRCGNTSFDTVTAESSGRSSPPRRITPSPSLNRPIPPAPSSSIRCTRCGVDQPAGT
                     KFCGRCGASLGGAQIAWSAAPRPVEVLCPGCGVTYPSGTKFCGRCGRTL"
     gene            2230..3105
                     /locus_tag="VIT19_04540"
     CDS             2230..3105
                     /locus_tag="VIT19_04540"
                     /inference="COORDINATES: protein motif:HMM:TIGR02772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEY5838282.1"
                     /translation="MRSIWKGHIRFLLVAIPIRVYNALEASERIQFNQLHRDDFGPVG
                     YDKRCKKCGEIVTNDQITKGYQYEPDRYAIIEPEEIAKIKIKTTRAVDILGFVESSEV
                     APMFFDSPYYIGPDGPVAEKPFALLRQVLKDTGKIGLAKVVLRDREDLVAVFPHDDGI
                     VLQKLRYPAEVRKVEDVPEIDAAPKLDKKELALATSLVEQMITTFADIDTVDHYHEAL
                     RKLIDSKIKGKKVTEFEKYEEPPRMDIMTALKKSLQASSRKPMVKAAPVASKKKAALT
                     LVKSKAAPAKKRKVG"
     gene            3241..3678
                     /gene="tnpA"
                     /locus_tag="VIT19_04545"
     CDS             3241..3678
                     /gene="tnpA"
                     /locus_tag="VIT19_04545"
                     /inference="COORDINATES: protein motif:HMM:NF033573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HEY5838283.1"
                     /translation="MSHVFHQLYYHFAWATHCREPLIDRAWRPQLLEIINDEVKTRGG
                     FPLRHNAMPDHAHLLCRLPPTVLLADFIGQLKGATSFRVNKEIRPKFKLHWQEGYGVL
                     TLRKDEIEKVARYIDRQEEHHRRGKLSDVLETFETTDDDWLKP"
     gene            complement(3871..5607)
                     /gene="polX"
                     /locus_tag="VIT19_04550"
     CDS             complement(3871..5607)
                     /gene="polX"
                     /locus_tag="VIT19_04550"
                     /inference="COORDINATES: protein motif:HMM:NF006375.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase/3'-5' exonuclease PolX"
                     /protein_id="HEY5838284.1"
                     /translation="MAKPLKDKFAIAASLQEIGTLLELKGGQYFKARAYKAGARAVAE
                     LSEDVGKLIKQNRLTFVKGIGQALAKQIEQLYSTGDSSLLNELRGQLPAGIIELSHIP
                     GLSVQKVGRLQEELGISSVEELRAACEAGKVREVKGFGAKTEAAILDAIAGHEKREQF
                     IHIHHAWRLSERILEYLATARGVLKAEAAGATRRWQETVSQVVIVASAKNPQTVIEHF
                     LRFPLVIRTESKTKARISRASVVLSEGYNATLFAVKPEEFAITLWRATGSEAHLNKLQ
                     PIAAKKKLNVLSGNGTPRSSLPRFKSESDIYKRLGLQYVPPELREDAGEIEAALKGKL
                     PEDLITTEDIRGMVHCHTMYSDGKHSVEQMVATAEALGMKYITITDHSPTAFYAGGVK
                     IDRLQQQWEEIERVQEQTKVKILKGTESDILQDGSLDYPDWILEQFDVIVASIHSRYK
                     MNSEQMTKRVVTAMRQPVFKIWGHALGRLIQRRPPFECDVERILDVIAESRAAVEING
                     DPYRLDMEPRWIREARKRKIKFVISVDAHSMNALHNVKYGVGIARRGWVRKGEVLNTL
                     GVKAFQKAVRPV"
     gene            5743..6816
                     /locus_tag="VIT19_04555"
     CDS             5743..6816
                     /locus_tag="VIT19_04555"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEY5838285.1"
                     /translation="MTDELRTEVEQVIEREDVKQALKQASPTEPEDKPKAEAKDKLWL
                     GTHFIILIALAAVRLVLQLSLFGYAERYPRVIELVQRLTLSAIGVVLLLAIAKLVDVY
                     WIGRIDSAVSRYNLRRVAKLALVMFLILVVVSGLFQNWYTTVVSIGLLSLILGLAVQT
                     PVTSFLGWIYILARSPYRVGDRIKIGEATGDVIDVSYLDTTLWEFGGGDLLSTDHPTG
                     RIIRFPNSKILDSTIYNYTWPLFPYIWNEIKFSVAYESDLEFVAETMQRVAAEEVGEH
                     MMEQVRVFREILAQTPVDQLEVREYPAVLFRPNANTWIDAIVRYLVHPKEAGRTKTRL
                     IKKLLMELNAAPDRVMFPKSNAR"
     gene            6881..7291
                     /locus_tag="VIT19_04560"
     CDS             6881..7291
                     /locus_tag="VIT19_04560"
                     /inference="COORDINATES: protein motif:HMM:NF016045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity iron permease family protein"
                     /protein_id="HEY5838286.1"
                     /translation="MRDIFRKFAQAASHAVGSPWAFIIATLIIVVWAVTGPLFGYSDT
                     WQLVINTGTTIITFLMVFLIQNTQNRDAKAIHLKLDELLKGVKGARTSLVDLEDLSDE
                     ELDDMQKYYERLHKEASSHATKRKSSKKKKKRAK"
     gene            7371..7748
                     /locus_tag="VIT19_04565"
     CDS             7371..7748
                     /locus_tag="VIT19_04565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838287.1"
                     /translation="MKKLASKTKLLIAFSVLAMIVTATAMARSGKQDFVLHNETGVEI
                     HELYVSPTTTDDWEEDMLGVDTLPSGDKVKVTFEDREHRAKWDMKVVDSKGNSIEWEN
                     LNLIEISDVTLHYENGKAWAEIK"
     gene            8009..>8890
                     /locus_tag="VIT19_04570"
     CDS             8009..>8890
                     /locus_tag="VIT19_04570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838288.1"
                     /translation="MRSRVILLCFTLLFIVDPALGQKRNITERDLFSFNWIADPQVSP
                     DGSRVAFVKATVNDRKDGYNTAIWMVSTVDGETKQLTGGTRDTSPRWSPDGKHLAFVR
                     VPEKDGRPDSPQLFMISLDGGEAWQFTTLPRGAGNPQWSPDGKMIAFANGATTEELAK
                     QKETLPVPPPASGVQPVASPTPTPTSSPKASPERESDVRVITRAVYRSDSGGYLDFKH
                     PSHIWVVNAPRTGADKVTPRQLTRGKYSEGNVTWARDSLSIYFVSDHRDEPYYELPAT
                     DLYLVSISGGEPRKLTSF"
BASE COUNT         1980 a         2508 c         2431 g         1971 t
ORIGIN      
        1 aagatcgctc aagtaaacct ggcgcggaag ctcctctcag tgtctcagtg ggtgcactgt
       61 gcctctgtgg tgagctgtca ttgaaagaat tttccacaca gagacaccga gtgccaacag
      121 agacactgag aaaaaccgag acagttgctt caacggagtt agagtgtccg tccgcagcgc
      181 ccgcagaatt ttgtgccgga ggggtaggtg acgccgcaac ccgggcacag cacttcaacc
      241 ggtcgcggcg ccgccgacca ggcgatttgt gcgccgccga gtgacgcgcc gcagcggcca
      301 cagaactttg tgcctgcagg ttgatcgacg ccgcagcgcg tgcaacgaat gctgctgctc
      361 ggcgccggtg ggatgggacg gttcagactc gggctcggag taatgcgtcg gggcggagac
      421 gaccggccgc tgctctcggc cgtcacggta tcgaacgacg tgttgccgca gcgcccacaa
      481 aacttcgcgc cggccgcgaa tcgcgagccg catttcgcgc acgccacaat tgcgggcgtc
      541 ttgatgtcaa cacccgagac actgccgagg cttccccctt ttgatggtga cagtccgctg
      601 gacgcggcgg acttgaactg ggcctgaatg atttgttcct cggcgtcctg gcgaatctcg
      661 atgacgcgtt cgtcgtcttt gtcgccggcg tgggcaatgc gccgcacgtg ctggcccggc
      721 ggaatcgaac tgagaatcaa acgcccggaa cgaccgacgc tgccgtgccg ctcgtcgtcc
      781 acgtaaactt ccgcgcccgc cggcgccatg acgacgacgc gcgtttcccc ttcttcctct
      841 tcgtgaattg aagcgccgcc cacggccaga tcgaattcgt ggaaccattc tgcgacggtt
      901 gcagagcggg catcagcttc cttcgtcagc gcgtgcatga cggctttttc gacagcgctc
      961 ggaatgtccg aacgtagagt actgagcgcc ggcgtttcct gcgtcagctt ttgcgcgaag
     1021 atctgcatga tctcgcccgt gaacggcggt cgtccaccca gcatgtgata ggcgatcgcg
     1081 cccagggcgt aaacatccgc gcgcgcatcg agcacggcgc ccgcatgcat ttgttcgggg
     1141 gccatgtatt caggcgtgcc cagaattccg cgcgaagctg gccctgaacc cgaggtgatt
     1201 ccggcgagac tctgactaat aattttagcg aggccgaaat cgccaacctt gacgatgtca
     1261 tcgcccgcga gcgtggtgcc gtcctttttt ttcttctgga cgatgaaaat gtttgcgggc
     1321 ttgaggtcgc gatgaagaat gccttcgtcg tgggccgctt caactccggc gcaggtctgc
     1381 cgcaaaaacg tcagcgcacg ctgcaccgga attgtgcctt cgcgacgcag cagttgatag
     1441 agcgactcgc cttcgacgta ttccatcacc aggaagaaga caccttcctc gcttttgcca
     1501 aagtccgtga cgccgatgac gttcggatgc tgcactgacg cggcggtgcg cgcttcacgt
     1561 tcgaaacgcg cgatcgcttc cccttcctgc aagtcttcgt cagacagaac gtccggccga
     1621 attgtcttga ccgcgacgcg ccgcgtaatc aagttttcat cacgcgcgac ataaacctgg
     1681 cccatcgcgc cacggcccag acgcttctcc aatcgatacc gtgcattcag cagcgtggta
     1741 ccgggaagag tgtgcttggt tttcgcttga tcgtcgggac acaggagtac ttcgtcgtcg
     1801 tagcagagtt cgcagcgggg acattcgcgc atgtaaaggt aaacaggtcg ctaaagctga
     1861 accgccagaa taagtcgtcg cgcctaagcg gtcaatcgca agttgtttga ctggagcgca
     1921 tgcgtcctcg cttgctgggt tgtttagtga gcatgcaagc gggacgcttg cgctccagtc
     1981 tacgcaacaa catattgcgg ctcgtgcccg gcgacccact ggaaactggg ccaaaataaa
     2041 tatctttact tgatggccca agtgatctca taatttcggc ccctcgcgaa tcaacttgag
     2101 ggctgggtcg atgatggccc agaagaatgc gggcgtcagg cccgcgtttg tgtctagtgg
     2161 cacagacttt agtctgtgag cgcttcacga attcacagac tgaagtctgt gccacccctg
     2221 gaggatccga tgcgttcgat ttggaaaggt cacatacgat ttctgctcgt cgcgattccg
     2281 attcgcgtct acaacgcgct cgaagcgtct gagcgaattc agttcaatca actgcaccgt
     2341 gacgattttg gccccgtcgg ttacgacaag cgctgcaaga agtgcggcga gattgtcacc
     2401 aacgatcaga tcacgaaggg ttatcagtac gaacccgatc gttacgcgat catcgaaccg
     2461 gaagagatcg ccaagatcaa gatcaagacg acccgcgccg tggacattct tggctttgtc
     2521 gagagttccg aagtcgcgcc gatgttcttt gactcgcctt attacattgg cccggacggc
     2581 ccggtcgcgg aaaaaccgtt cgccctcctg cgtcaggtcc tgaaagacac tggcaagatc
     2641 ggcctggcga aagttgtcct tcgcgatcgt gaagacctcg tcgcggtctt cccgcacgac
     2701 gacggcatcg tgttgcagaa gctgcggtat ccagccgaag tgcgcaaggt cgaggatgta
     2761 ccggaaattg atgcggcgcc gaaactcgac aagaaagagt tggcgctcgc gaccagtctg
     2821 gtcgaacaga tgatcacaac cttcgccgac atcgacaccg tcgatcatta tcacgaagcg
     2881 ctgcgcaagc tgatcgattc gaagatcaaa ggcaagaagg ttaccgagtt tgagaagtat
     2941 gaagagccgc cgcgcatgga catcatgacg gcgctgaaga agagcctgca agcatcatcc
     3001 cgcaagccca tggtcaaggc tgcgccggtc gcttcaaaaa agaaggccgc gcttactttg
     3061 gtgaaatcaa aggctgcccc ggctaagaaa cggaaggttg ggtaggcgcg cggtttatgt
     3121 aacccagcca tttactccca tgtaaaaacc ttttacgtag cccagccgtt tacggctggg
     3181 tacaattcgt gacattcgag ctgaagcccc tttaggggct ttcatcatta ggaggaacat
     3241 atgtcccacg tgtttcacca actctattac catttcgctt gggccacaca ctgtcgcgaa
     3301 cctctgattg atcgagcgtg gcgaccacag ctcctcgaaa tcattaacga tgaagtaaag
     3361 acacgcggcg ggtttcctct ccgccacaat gcaatgcccg accacgcaca cctgctttgt
     3421 cggctgccgc caactgtctt gcttgctgat ttcataggac agttgaaggg agcaacctca
     3481 ttcagggtta acaaggagat tcgaccgaag ttcaaattgc attggcaaga aggttacggc
     3541 gttctaactt tgcgtaagga cgagattgaa aaggttgcgc gttacatcga tcgtcaagag
     3601 gaacatcatc ggcgcggaaa actatcggac gttcttgaga cgtttgaaac gacggatgat
     3661 gattggctga agccctgatc aagccgcctg aaggcggctt aacttatttc tttccgctga
     3721 cccagccgta aacggctggg ctacataaaa acatttgcaa caaagaacct ttcctgcaac
     3781 ccagccgtaa acggctgggc tacagaaaac ggctgcacgt gcaggcatcg ttaacgcttc
     3841 tgcctatctg tctaatctgt ggataactct tcacaccggc cgcactgctt tttgaaacgc
     3901 cttcactccc aaagtattta acacttcacc ttttctgacc cagccgcggc gcgcgatgcc
     3961 gacgccgtac ttcacgttat gcagcgcgtt cattgaatgc gcgtccacgg aaatgacgaa
     4021 tttgattttg cgtttgcgag cttcccgtat ccaacgcggc tccatgtcca gccggtacgg
     4081 atcaccgttg atctcaaccg ccgcgcgtga ttcggcaatc acgtcgagaa ttctttcgac
     4141 gtcgcattcg aatggcggcc gtcgctgaat cagacgcccg agcgcgtgtc cccaaatctt
     4201 gaacaccggc tgacgcatgg ccgtaaccac ccgcttcgtc atctgctcag aattcatttt
     4261 gtagcgcgag tgaatgctcg cgacgattac gtcgaactgc tctaaaatcc agtcgggata
     4321 atccagcgac ccatcctgaa gaatgtctga ctcagtgcct tttaaaatct tgaccttcgt
     4381 ttgctcctga acgcgctcga tttcttccca ctgttgctgt aagcgatcga tcttcacgcc
     4441 accggcgtag aacgcggtcg gcgagtgatc tgtgattgtg atgtacttca tgcccaacgc
     4501 ttcggcggtg gccaccatct gttcaacgct gtgcttgccg tcggaataca tcgtgtgaca
     4561 gtgcaccatc ccccgaatgt cttcggtggt gatcaagtct tccggcaact tgcctttgag
     4621 tgccgcttcg atttcgcccg cgtcctcgcg caactccggc ggcacatatt gaagtcccag
     4681 tcgtttatag atgtcgctct ccgatttgaa tcgtggtaag gaactgcgcg gggttccgtt
     4741 gcccgaaaga acatttagct ttttcttcgc cgcaatcggc tgaagcttgt ttaagtgcgc
     4801 ttcagaaccg gtggcgcgcc acagagtgat cgcaaactcc tcaggcttaa ccgcgaagag
     4861 cgtcgcgttg tagccttcgc tcaacaccac cgaggcccga ctaattcggg ctttagtctt
     4921 tgattcagtt cgaatgacga gcgggaaccg cagaaaatgt tcaatgaccg tctgtggatt
     4981 ctttgccgac gcgacaatca caacctgcga gactgtctct tgccagcgtc gggttgcgcc
     5041 ggctgcttcc gccttcaaca ccccgcgcgc cgtcgcgaga tactcgagaa tccgctcgct
     5101 caagcgccag gcatgatgaa tgtgaatgaa ctgctcgcgc ttttcgtggc cggcaatcgc
     5161 gtcgagaatc gcagcttcag tcttcgcgcc aaagcctttg acctcgcgca ccttgccggc
     5221 ctcgcacgcg gcacgcaact cttcgacgct ggaaatcccc agttcttcct gaagacgtcc
     5281 gactttctga accgacaaac cgggtatgtg cgacagctcg atgatgcccg ccgggagttg
     5341 accgcgcagt tcgttcagca gcgaagaatc gccggtcgaa taaagctgtt ctatttgttt
     5401 cgcaagcgcc tggccgattc ccttcacgaa cgtcagacgg ttctgcttga tcagcttgcc
     5461 gacgtcttcg cttagttcgg cgaccgcgcg cgcgcctgct ttatacgcgc gagctttgaa
     5521 gtactgcccg cctttcaatt cgagcaacgt gccgatctcc tgcagcgacg ccgcgatcgc
     5581 aaatttgtct ttcagtggtt tagccaaagc gttagtcgta ccaattgaat tttgaacgtt
     5641 gtactcagtc tatatggcat agcgagtgcc tatttccaaa tacacagact agctcggcct
     5701 ttcgcaacac gaactccaga cgcgcgtgag gattctgtaa gaatgacgga cgaactgcgc
     5761 actgaagtcg aacaggtgat tgagcgcgaa gatgttaagc aagcgctcaa acaggccagt
     5821 ccgactgaac ctgaagacaa accgaaagcc gaagccaagg acaagctttg gctcggcact
     5881 catttcataa ttctgatcgc gctggcggct gttcggttgg tcttgcagct gagcttgttt
     5941 ggctacgccg aaagatatcc gcgggtcatc gagttggtgc aacgactcac gctcagcgcg
     6001 atcggtgttg tgttgctgct cgcgatcgca aagctcgttg atgtttattg gatcggaaga
     6061 attgacagcg cagtttcgcg atacaacctg cgacgtgttg cgaagctggc gcttgttatg
     6121 tttctgatcc tggttgtcgt ctctggtcta tttcaaaact ggtacacgac agttgtctcg
     6181 attggcctgc tgtcgctgat tctcggcttg gcagtccaga cgccggtcac aagtttcctc
     6241 ggttggattt acatcctggc ccgttcgccg tatcgcgttg gcgaccggat caagattggc
     6301 gaagccactg gcgacgtcat cgacgtcagt tatctggaca cgacgttgtg ggaattcggc
     6361 ggcggcgact tgctctcgac cgatcatccg acgggacgca tcatcaggtt tcctaattcc
     6421 aagattctgg actcaacaat ctataactac acctggccgt tgtttcctta catctggaac
     6481 gaaatcaaat tcagcgtggc ctatgaaagc gatctcgagt tcgtagccga gacgatgcag
     6541 cgcgtcgcgg ccgaagaagt cggtgaacac atgatggaac aagtgcgtgt ctttcgcgag
     6601 attctggcgc agacgccagt cgatcaattg gaggtgcgcg aatatcccgc ggtgctgttt
     6661 cgccccaatg cgaacacctg gatcgacgcg atcgtgcgtt acctcgtaca tccgaaggaa
     6721 gccggccgca ccaagacacg tttgattaag aagttgctga tggagctcaa cgcggccccg
     6781 gatcgggtta tgttcccgaa gagcaatgcg agataaatcg catgcaggac tccggcgtgc
     6841 ttaacactta atgaagcacg ccggaggcga gcgtaccgat atgagagaca tatttagaaa
     6901 atttgcacag gcggcctcgc atgcagttgg atctccgtgg gcttttatca tagccacctt
     6961 aattatcgtg gtctgggcgg taaccgggcc gctgtttggc tattcagaca cctggcaact
     7021 cgtcattaac accggcacca cgattattac ttttctgatg gtctttctaa ttcagaacac
     7081 tcagaatcgt gacgcaaagg ccattcatct caagctcgac gagctgctaa agggagtcaa
     7141 gggcgcgcgc accagtctcg tcgatctgga ggacttgtct gacgaggagc tcgacgatat
     7201 gcaaaagtat tacgagcgac tacacaaaga ggcctcgtcg cacgccacga agaggaagag
     7261 ttctaagaag aaaaaaaagc gcgcgaagta ataacttttt gcgttgattt tgaaattatc
     7321 accgtgctag gctgcatggc cctcgggcag aaaaacttaa ggagaagtaa atgaaaaagt
     7381 tggcttcgaa aacaaaacta ttaatcgcct tcagtgtgct ggcgatgatt gtcaccgcca
     7441 ccgccatggc gcgctcaggc aagcaggact tcgtgcttca caacgagacc ggcgtcgaaa
     7501 ttcacgaact gtatgtttcc ccgactacta cagacgattg ggaagaagac atgctgggcg
     7561 tggacacctt gccctctggg gacaaagtga aggtcacttt tgaggaccgg gagcaccgtg
     7621 cgaaatggga catgaaggtc gttgacagta aaggtaacag catcgagtgg gagaatctca
     7681 acctgattga gatttcggac gttaccctgc actacgaaaa cggaaaagcc tgggctgaga
     7741 ttaagtagtg gtacaccagt cgcacaacgg ttgaatttaa tagccgtggg ggacgccccc
     7801 ggtcacgcga cgagcacaat ccgaccctgg aaaggtcgaa cgattaaaac gattcgaccc
     7861 tttcagggtc gtcgtgtatc tatcgtccat ccgggtggcg ttgtcaccag ctattcactt
     7921 cttcgctccc gcggacgttc ccgctaattc aatcttaaag tagaatacgc gcgcctttcc
     7981 aaacccgcag gtgcaaagga ctctgtcaat gcgatcacgc gtaattcttc tttgcttcac
     8041 acttcttttc atcgttgatc cagcgctcgg gcaaaagcga aacatcactg aaagggatct
     8101 gttcagcttc aattggatcg ccgatccgca ggtgtcgccg gacgggtctc gcgtcgcgtt
     8161 cgtgaaagcc accgtcaacg accggaagga cggttacaac actgcgatat ggatggtctc
     8221 gacggtggac ggcgagacaa agcaactaac gggtggcacg cgagatacat cgccgcggtg
     8281 gtcgcctgat ggaaagcacc tggcgttcgt gcgcgtgccc gagaaagacg gccggcctga
     8341 ttccccgcag ttgttcatga tttcgcttga tggcggcgaa gcctggcagt tcacaaccct
     8401 cccgcgcggc gccggcaatc cgcagtggtc gcctgacggg aagatgatcg cgttcgcaaa
     8461 cggcgcgacg accgaggaac tcgcgaagca aaaggaaact ttgcccgtac cgccgccggc
     8521 ttcaggcgtc cagcccgtgg catcgccaac gccgacgccc acttcttcac cgaaggccag
     8581 ccctgaacgc gaaagcgacg tgcgcgtgat cacgcgcgct gtttatcgat ccgattccgg
     8641 cgggtacctg gacttcaaac acccgtcaca catttgggtc gtcaacgcgc cgcgcaccgg
     8701 agcagacaaa gtaacgccca ggcaactgac ccgcggaaag tacagcgagg gcaacgtgac
     8761 ctgggcgcgc gacagtctct cgatctattt cgtgtctgat catcgtgacg agccttacta
     8821 cgaattgccg gcgacggatc tgtatctggt ttcgatctca ggaggtgaac cgagaaaact
     8881 gacctcgttc
//
LOCUS       DATDBY010000245         9746 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1533729, whole genome shotgun sequence.
ACCESSION   DATDBY010000245 DATDBY010000000
VERSION     DATDBY010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 9746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9746
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1533729"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(216..1250)
                     /locus_tag="VIT19_04575"
     CDS             complement(216..1250)
                     /locus_tag="VIT19_04575"
                     /inference="COORDINATES: protein motif:HMM:NF041359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntG family PLP-dependent aldolase"
                     /protein_id="HEY5838289.1"
                     /translation="MIDLRSDTVTKPTPAMRRAMAEAEVGDDVYGEDPTVNRLQELAA
                     EIFQKEAALYVPTGSMGNQIAVKLHTRPGNEVVIEERGHIYNFEMATMAAFAGCVARP
                     VHSQDGSGILTWDEIAAALHANAAYYVAPTGLIAIENSHNLAGGSVMPRARAEDICEH
                     AHEMKLPVHLDGARIFNAATALGETVADLARPVDSVMFCLSKGLGAPVGSMLLGTKAF
                     IDQARSVRKMLGGGMRQAGVIAAAGLVALQETPKRLHEDHENASRLAVGLAELPGIKI
                     DPERVVTNIVIIDVAETGKTADGICAELRERGVLAIGFGSSIRMVTHYDVSRPDIETA
                     LREFGQLLSR"
     gene            complement(1471..1953)
                     /locus_tag="VIT19_04580"
     CDS             complement(1471..1953)
                     /locus_tag="VIT19_04580"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEY5838290.1"
                     /translation="MQILSPEDSLADPVRDPDESLEDWLNVNDTSRNETDHPATDPRN
                     AAAPPQPREISFEGVLRINGYAAGLIRSTEGRLIVDTDGELDADISVHDATIYGCVRG
                     DIHAKQKVELRGSARVVGDIQAVALSIDPGAVFEGRCIFVQASATADSSTPPASAVTG
                     "
     gene            complement(2002..2421)
                     /locus_tag="VIT19_04585"
     CDS             complement(2002..2421)
                     /locus_tag="VIT19_04585"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEY5838291.1"
                     /translation="MIIGEATYRGYTPVDGVISGQLTASGGGLTIKQRVRSDSGPELD
                     GELSFKDLLRVNGHIRGKVQSERGTLIIADAATVDAQIEVAVAIISGEVNGDVFARER
                     VELGHGAVINGNISTPLLCIKPGATFHGDCRMLKTAG"
     gene            complement(2767..5505)
                     /locus_tag="VIT19_04590"
     CDS             complement(2767..5505)
                     /locus_tag="VIT19_04590"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEY5838292.1"
                     /translation="MKAPNRLRASLSLFLLCALLPFSFAHAAGGRLAGKVTDPEGASV
                     AGATVTLTGTLTNQTFTAVTDKQGLYKFEGLPAGAYSLVVAAAGFSDTRNDAVKIEEG
                     AAVTLDVKLEIAPVEATVTVTSLKANTDTNYQQLRQVAKRSGDFAGPFATVNNLVIKR
                     DAGVFTLKSGEIYFTPAVQERTLGAVFFGEGELSLTPPTEVEKHMLSLFTKEKSITEA
                     FTKLVLHFTDKSFDEIKASPQVTMSTNGSQASRAQDAYRDNQSLLRQTLRRNVDLRKL
                     VDLYNPQRPGFFTAFIDGKRFNKLIFQYDPLGIPIVSPEEVLLSSYGQTDGGLWTAFH
                     RAEEYAKGTASSDEDHRIYDIVHHEIDTVIRGTRLTSTDTLTFRQLDNGARVLPFRLF
                     PSMRVSRVKDETGRDLDFVQEGKNDDADFGVIFPEPLDAGKTYKLTVEYGGGDALIDV
                     GAGNFFLVPRSTWYPNNEGSAFGDRATFDITYHYPKDRILIGTGAPVAPPVADGGGMM
                     VKWSSGQTALAVAGFNYGGFKKKELLDKDTGYNLEFFANETAPSGVAFADPALMSSQG
                     STSTMAQGGRMLDVTQNATRLFDSYFGKLPYTRLALTQQPSANFGQAWPTLIYMPFTA
                     FMDSTQRYLGTEGNIRYATDDFFEYVAPHEIAHQWWGHIVGWKSYHDQWMSEGFAELS
                     ASLYVQHVMRDEGRFLKYWNDQRDLIIEARPQTADKKPYTVGPVTQGYRLNSGKTGGV
                     ARFMIYPKGAYILHMLRMMMYDRTTRDSRFKTMMQDFIKTHYNLDVSTEDFKRVVEKH
                     MTSEMDLDGNRRMDWFFDAWVYGTEMPSYKFEYQLKGDSLSGKITQSGVSDKFKMPVP
                     VYVDYGKGWVRLGSAFIVGNSTVDLGNLKLPQAAKRAAICSLADILALNVTNDHRP"
     gene            5644..6492
                     /gene="ttcA"
                     /locus_tag="VIT19_04595"
     CDS             5644..6492
                     /gene="ttcA"
                     /locus_tag="VIT19_04595"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF007972.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HEY5838293.1"
                     /translation="MFAKSRNKMRLLRRMGEAIEDFGMIEDGDRLMVCMSGGKDSHTL
                     LDLLLDVQQRAPVHFELLAVNLDQKQPGFPAEVLPDYLRERGVPFRIVEQNTYAIVKR
                     LVPEGKTFCSVCSRLRRGILYNIAVEEGCNKIALGHHADDIISTFLLNVFYVGKLKAM
                     PPVLRSDDGRNTIIRPLAYCRASDITEFASEMKFPIIPCDLCGSQPNLKRARIERLIT
                     DLEKEIPNIRASMLTALGNAVPTHLLDPNLFDFKKLSSGTGDVEAELDLVLGHTDSEP
                     ALVAIA"
     gene            6574..7635
                     /locus_tag="VIT19_04600"
     CDS             6574..7635
                     /locus_tag="VIT19_04600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838294.1"
                     /translation="MAGTKKRELDLTAFPSGTVTEYTTLVCLACIFDIFTKQLQMAPR
                     TAFSEVKRHTPTVEELTSRDTMRPYFDSDDKNPHCPYCGSAKRWLARFDTYCIEGGKP
                     TDTARRTLIKKLPTAGDQFIVVEKKSDSRAVFFEWLDTLGMNVELQDETWLIETTRRY
                     LERRDPKTNWAEMFEGARAVRRSSRLTEGWERDGARLFLAPQLYSEAILIQYLVSRSH
                     AHGGLTLEGRLTLMDLLRRLRYSGYLDRIGITETDPGEVFERVVDHMAATHEWANAGP
                     AGSAAKGKGVSTGSVSDRVKSSSKSKKNPGKKASKSGKTKPVQPEPDEIVSEPVKLYY
                     LIDRRNFLEKVKSVYAAYA"
     gene            complement(7770..8684)
                     /locus_tag="VIT19_04605"
     CDS             complement(7770..8684)
                     /locus_tag="VIT19_04605"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF045485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004337 - geranyltranstransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="farnesyl diphosphate synthase"
                     /protein_id="HEY5838295.1"
                     /translation="MKTIADSSLTTNAKEFLAATRLLIDQELDRLIPKETDDPTRLHS
                     AIRWSVFAGGKRFRPALVLAVGGAFGAATDQLMRTACAFEMIHTYSLIHDDLPSMDDD
                     DLRRGRPTCHIKFGEATAILAGDALQALAFQTIAQSENLSAEIRVRIIAELSRAAGTP
                     SGMVSGQALDLDGEAQSVDATALDEIHVQKTGALICGAARCGAIIGGANDEELEAVTD
                     YGRNLGLLFQITDDLLDVTASASAMGKTPGKDARASKATYPAVHGIDASRRQIEIVRR
                     SACDAATSINRPAELLISIVDLIADREA"
     gene            complement(8702..9406)
                     /locus_tag="VIT19_04610"
     CDS             complement(8702..9406)
                     /locus_tag="VIT19_04610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838296.1"
                     /translation="MAAFVGFLMARGYQHYKSVYKRRVVKWFWVPNDSARIYLYCGMW
                     RDKLTDFGEVEPLLNLQDALTLGELRGFLQSYYKDVEIVTETNSIDWRFPVVSLGGPL
                     PNPLTAEIGKRDLIPIWFLDAPYSQHSERAIGTKEKDVVFKSKFGDTGHLKSDVGFVA
                     RIRSPENGQQVVFVIASNYGVGNLGVVKFITSSEKLTQLSRANLDRHFQVVISSHIAG
                     DDTILDTELMYCRSLN"
     gene            complement(9475..9744)
                     /locus_tag="VIT19_04615"
     CDS             complement(9475..9744)
                     /locus_tag="VIT19_04615"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEY5838297.1"
                     /translation="MSKNNSQNFETSLEELERIVRELERGDLPLEKSLDLFEQGVKLS
                     RACQERLNEAERRIEVLTRDNQGRPTIRPFDADKELSATDDQDLS"
BASE COUNT         2046 a         2795 c         2732 g         2173 t
ORIGIN      
        1 gattttcagt tcgcccgtcg gttttggcgg ctgggtacgc caccacggca atccccactt
       61 gatgaatgca aacgtacccg tgcccagcaa cagtacaagc accgcaatca cacatccgca
      121 tccgcgagtt gatctcttca tgttggaacc tgtggagagg agttgttact ttactacgtg
      181 gttggcagcc acgaaaactt cacccggtgg tgaattcacc tcgaaagcag ttgaccgaat
      241 tcgcgcagcg ccgtttcaat gtccgggcgc gacacgtcgt aatgcgtgac catgcgaatc
      301 gacgatccaa atccgatcgc cagcacgccc cgctcgcgaa gttcagcaca aatgccgtcg
      361 gcagtcttgc cggtttcggc aacgtcaatg atcacgatgt tggtaacgac tcgctcagga
      421 tcgatcttga ttccgggcag ctcggccaag cccacggcca gccggctcgc gttctcgtga
      481 tcttcgtgca gccgcttggg agtttcctgc aaggcgacca aacccgcggc cgcgatcacg
      541 ccggcttgtc gcattcctcc gccgagcatc ttgcgcaccg agcgcgcctg gtcgatgaag
      601 gctttcgtgc cgagcaacat cgacccaacc ggcgcaccca gccccttcga taagcagaac
      661 atgactgagt cgaccggtcg cgcgaggtca gctaccgttt cacccagcgc cgtcgccgca
      721 ttaaagattc gcgcgccgtc caggtggacc ggtaacttca tctcatgcgc gtgttcgcaa
      781 atgtcttccg cgcgcgcgcg gggcatcacg gatcccccgg cgaggttgtg tgaattttcg
      841 atcgcgatca gcccggttgg cgcaacgtag taagccgcgt tggcgtgaag cgcagcagcg
      901 atctcgtccc aggtaagaat gccgcttccg tcttggctgt gcacgggccg cgcaacgcaa
      961 cctgcgaacg cggccatcgt cgccatctcg aagttgtaga tgtgtccgcg ctcttcaatg
     1021 acgacttcgt tgccgggccg cgtgtgcagc ttcaccgcga tctgatttcc catcgagccg
     1081 gttggcacat acagcgcggc ttctttttga aaaatctcag cggccaactc ctgcaaacga
     1141 ttgacggtgg gatcttcgcc gtagacgtca tcgccgacct cggcttcggc catggcgcga
     1201 cgcatcgccg gcgtaggttt agtaacggtg tcgctgcgta aatcgatcat ttgtgtagtg
     1261 gcttggactt tagtctgagc attttcagcg tagcgcgccc ctccctgtgt gcggggaggg
     1321 gatgggggtg gggttagcgc cgtgtaacct ctcccctaac ccctctccgc ttgcggagag
     1381 gggaaatgac tgaagtgtag ctccggactt tatcacagat tcaccggtaa aatcgggcag
     1441 aaaacgcgct tttgcggagg atcaggggac ttagccggtc accgcggaag ccggcggcgt
     1501 ggaagaatcg gcagtagcgg atgcttgcac aaagatgcaa cggccctcga agacagcgcc
     1561 gggatctatt gagagcgcca cggcttggat gtcgccaacg acgcgggctg atccgcggag
     1621 ttcgaccttt tgctttgcgt gaatgtcacc gcgcacgcag ccatagatcg tcgcatcgtg
     1681 gactgaaatg tctgcatcga gttcgccgtc ggtgtccaca atcagcctgc cttcggttga
     1741 acggattaat cccgcggcgt acccgttgat tcgcaagaca ccttcgaatg aaatctcgcg
     1801 cggctgtggc ggcgccgcgg cgttacgcgg atccgtagcc gggtgatctg tttcgtttcg
     1861 cgaagtgtcg ttgacgttta gccagtcttc aagactctcg tccggatcgc gcacgggatc
     1921 cgcaagagaa tcctccggac tcaaaatctg cacgggttta agggtcaggg tttcggcttc
     1981 ctgtgacacg aggctcggta gctacccagc ggtcttcaac attcgacagt cgccgtgaaa
     2041 agtagcaccg ggtttgatgc agagcaaggg ggttgaaatg ttgccattga tgactgcgcc
     2101 gtgacctagt tcaacccgct cgcgcgcgaa cacatcgccg ttgacttcgc cgctgatgat
     2161 cgccacggca acttcgatct gcgcatcgac cgtcgcagcg tcagcaatga tcagcgtgcc
     2221 gcgttccgat tgcaccttac cgcgaatgtg tccgttgact cgcagcaggt ctttgaacga
     2281 aagctcgcca tcgagttccg gaccagaatc agatcgcacg cgctgtttga tcgtcagtcc
     2341 gccgccactc gccgtcaact ggcccgatat gactccgtcc accggcgtgt agccgcgata
     2401 agttgcttcg ccgataatca ccggaacgcg agtctgaaac gcctgcggtt tttgcgttgc
     2461 gggcggcgct acgggcctga gtccagcggc gggacgacga tcaacaccgg caatgacgtt
     2521 tggacgacgg gaaggagaag tttcaccgct gctgggtcgc agcgcggttt cggtctctaa
     2581 ttgaagcgcc ggcttggcca ggggcgtttt cctttctccg ctcgaaccgc gtggaaacag
     2641 ttcgaaaact gttcaaacaa acttaaccag ggaggagtcc gcgttgactt gagggcgcgc
     2701 acactaccac aaggggcgac gctgttcaag gaaattctgg gccgtcgcgg gtccgcaaaa
     2761 gcctggtcac gggcgatggt cgttcgtgac gttcagggca aggatgtcgg ccagtgagca
     2821 aatcgctgca cgcttcgcgg cttgcggcag tttcaaattt cctaagtcca cggttgagtt
     2881 tccgacgata aaggccgatc ccagcctgac ccagcccttt ccgtaatcga cgtacaccgg
     2941 cacgggcatc ttgaatttat ccgaaacgcc tgactgcgtg attttgcctg ataagctgtc
     3001 gcccttcagt tggtactcga atttgtagct cggcatctca gtcccataga cccacgcgtc
     3061 aaaaaaccag tccatccgcc ggtttccatc cagatccatc tcactggtca tgtgcttttc
     3121 aaccacgcgc ttgaagtctt cagtcgatac gtccaggttg taatgtgtct tgataaagtc
     3181 ctgcatcatc gtcttgaagc ggctgtcgcg ggtggtgcgg tcgtacatca tcatgcgcag
     3241 catgtgcagg atgtaagcgc ccttgggata aatcatgaag cgcgcgacgc caccggtctt
     3301 tccgctgttc aagcgatacc cttgagtaac cgggccaacc gtgtaaggct ttttgtcagc
     3361 tgtctgcgga cgtgcttcga ttattaagtc gcgctggtca ttccaatact taagaaagcg
     3421 accctcgtca cgcattacgt gctgaacgta gagcgaggct gataactcgg caaagccttc
     3481 actcatccat tgatcgtgat agctcttcca gcccacgatg tgcccccacc actgatgagc
     3541 gatctcgtgc ggcgcaacgt attcaaagaa gtcgtccgtc gcatatctaa tgttcccttc
     3601 ggtgcccagg tagcgctgcg ttgaatccat aaaagcagta aacggcatgt aaatgagcgt
     3661 gggccacgcc tgtccgaaat tcgcggacgg ttgctgcgtg agcgccagcc gcgtatacgg
     3721 caactttcca aaataagaat cgaacaggcg cgtggcgttc tgagtgacgt ccaacattcg
     3781 accgccctgg gccatcgtac tcgttgaacc ctgggaactc attaaagccg ggtcagcgaa
     3841 agccacgccc gagggcgccg tttcgttggc aaaaaactcg aggttgtagc cggtgtcctt
     3901 atcgagaagt tctttcttct tgaagccgcc gtagttgaat cccgcgaccg ccaacgccgt
     3961 ctgcccactc gaccacttca ccatcatgcc gccaccgtcc gcgactggtg gcgcaacggg
     4021 cgctccggtg ccgatcagaa tcctgtcttt tgggtagtgg taagtgatat caaacgtcgc
     4081 tcgatcgccg aacgcgctac cttcgttgtt cgggtaccag gtcgaacgcg gcacgaggaa
     4141 aaagttgcca gcgccgacgt cgatcaacgc gtctccgccg ccatattcaa ccgtaagttt
     4201 gtaggtcttg ccggcgtcga gcggttcggg aaatatcacg ccgaaatcgg catcatcatt
     4261 ctttccctcc tgaacgaaat ccagatcgcg gccggtttca tccttgacgc gactcacacg
     4321 catggaagga aacaatcgga acggcaaaac acgcgcgccg ttgtccaatt ggcgaaacgt
     4381 aagcgtgtcg gtcgaagtca gtctcgtgcc gcggatgacg gtatcgattt cgtgatggac
     4441 tatgtcataa atccgatgat cctcatcgct tgaggcagtg ccctttgcat actcttcagc
     4501 gcgatggaac gccgtccaca gtccgccgtc ggtttgtccg tagctcgaga gcaaaacttc
     4561 ctccggtgaa acgatgggta tgccaagcgg gtcatattga aagatcagct tgttgaagcg
     4621 tttgccgtcg atgaaggccg taaagaatcc cggccgctgc ggattgtaca gatcgacaag
     4681 cttgcgcaaa tcgacattgc gtcgcagcgt ctgtcgcaga aggctttggt tgtcgcgata
     4741 agcatcctgc gcgcgcgaag cttgcgaccc gttcgttgac atcgtgacct gtggcgacgc
     4801 tttgatttcg tcaaaagact tgtcggtgaa gtgaagcacc agtttggtga aagcttcggt
     4861 gatcgacttt tccttcgtga acagcgacag catgtgcttt tcaacttcag tcggcggagt
     4921 cagagacagc tcgccttcgc caaagaagac cgcgcccaag gtgcgctcct gtaccgcggg
     4981 cgtgaaatag atctcgccgc tcttcaatgt gaacacgccg gcatctcgct tgatgaccag
     5041 gttgttaacc gtcgcaaacg gcccggcaaa gtcgccgctt cttttcgcca cctggcgcaa
     5101 ttgctgatag ttggtatccg tgttggcttt gaggctcgtc accgtgaccg ttgcctcgac
     5161 gggggcaatc tcaagtttca catccaacgt gacggcagcg ccctcttcaa tcttgacggc
     5221 gtcgttgcgt gtgtcgctga acccggccgc cgcaaccacc agcgagtaag ctccggcggg
     5281 gagcccctcg aatttataca ggccttgctt gtccgtaacc gccgtgaagg tttggttcgt
     5341 cagcgtgccg gtgagcgtga cggtcgcacc ggccacgctc gcgccctccg gatcagtaac
     5401 tttccccgcg agtcgcccgc ccgcggcgtg ggcgaacgaa aagggaagca atgcgcacaa
     5461 gaggaacaga gacagagagg ctctaaggcg attgggggct ttcacaatca gtttgactcc
     5521 agtgagtaat tggccgggga gaagacgatt tcaacgggcg cattctagct cacgcggcct
     5581 cggtacgtat acccattttt gtcggtttgt cagccgcgtc cgccccatgg cattctgagg
     5641 ccgatgtttg ccaagagtcg caacaagatg agactactgc gccgcatggg cgaagcgatt
     5701 gaagacttcg ggatgatcga agatggcgac cgcctgatgg tgtgcatgtc gggcggcaaa
     5761 gacagtcaca cactgttgga tttgctgctc gatgtgcagc aacgcgctcc ggtgcatttc
     5821 gagttgctgg cagtgaatct cgatcagaag cagccaggtt ttccggcgga ggttttgccc
     5881 gattatctac gcgaacgcgg cgtgccgttt cgcattgtcg agcaaaacac ttacgcgatc
     5941 gtgaagcggc tggtgccgga agggaagact ttctgttcgg tctgttcgcg tctgcggcgc
     6001 ggcattcttt acaacatcgc ggtcgaggaa ggctgcaaca agattgctct ggggcaccac
     6061 gccgacgaca tcatctccac gtttctgcta aacgttttct acgtcggcaa gttgaaagcg
     6121 atgccgccgg tgctgcggtc cgatgacggc cgcaacacga tcattcgccc actggcttac
     6181 tgtcgtgcaa gcgacattac cgagttcgcg tctgaaatga agtttccaat cattccatgc
     6241 gatctctgcg ggtcgcagcc taacctgaaa cgcgcgcgca tcgaacggct aatcacggat
     6301 ctggaaaaag agattccgaa tattcgcgcg tcgatgttga cggcactcgg caatgcagtg
     6361 ccgacccacc tgctcgatcc aaatctcttc gacttcaaga agctttccag cgggaccggc
     6421 gacgtcgagg ccgaactcga tctcgttttg ggccacacgg acagcgaacc tgcactggtg
     6481 gcgattgcgt aagacaacca ctaagacacc aggtcacaaa gcaatctcag gtcttgcttc
     6541 gtgtcttcga gtctttgtgg ttaaaatccc ggcgtggcag ggactaaaaa acgtgaactc
     6601 gacctgacgg catttccttc gggaacagtc accgagtaca ccacgctggt ttgtctcgcc
     6661 tgcatctttg atatcttcac caaacaactt cagatggccc cgcgcacagc cttttcagag
     6721 gtgaagcgtc acacgccgac cgtcgaagaa ctcaccagcc gcgacacgat gcgtccgtac
     6781 ttcgacagcg acgataagaa cccccactgt ccgtactgcg gttcggcaaa gcgttggctg
     6841 gcgcggttcg acacctattg catcgaaggc ggcaagccga ccgacaccgc ccgccgaacg
     6901 ctgattaaga aacttcccac cgccggcgac cagtttattg ttgtcgaaaa gaaatccgat
     6961 tcacgtgcgg tgttctttga gtggctcgac actctgggaa tgaacgttga gctgcaagac
     7021 gaaacgtggc tgatcgaaac gacgcgtcgt tatctcgagc gccgcgatcc gaaaacgaat
     7081 tgggcggaaa tgtttgaagg cgcgcgcgcc gtgcgtcgct cgtcccgact gacggaaggt
     7141 tgggagcgcg atggtgcacg gctgtttctt gcgccacagc tttacagcga ggcgattctc
     7201 atccaatacc tcgtcagccg ctcacatgcg catggtggat tgacgctgga gggccggctc
     7261 actttgatgg atttgcttcg ccgcctgcgc tacagcgggt acctcgaccg aatcggaatt
     7321 accgaaacag atccgggcga agtgttcgag cgagttgtcg atcacatggc ggcaactcac
     7381 gaatgggcga atgccggccc agctggcagt gccgccaagg gaaaaggagt cagtaccggg
     7441 agcgttagtg accgggtcaa gagctcaagc aagtctaaga agaacccggg aaagaaggct
     7501 tccaagtcag gcaagaccaa acccgtccag cctgagccgg acgagatcgt ctctgaaccc
     7561 gttaagctct actacttgat cgatcgccgc aattttctgg aaaaggtgaa gagtgtttac
     7621 gccgcgtatg cgtgatttgg agtgcggcga gattgggaac gcgggcgccc tcgcccgcat
     7681 ctgcgcgaga tgcgttgcgc gcgcgtccct tcaatgagcc ggtttttgtt aggggcatgc
     7741 ggacgagggc gtccgcgctc cgtcagctct cacgcttcac gatcagcgat caagtcaaca
     7801 atcgaaatca aaagttccgc aggtcgattg atgctcgtcg ccgcgtcgca agctgatcgg
     7861 cgcacaattt cgatttgccg ccggctcgcg tcgataccgt ggaccgccgg gtaagtcgct
     7921 ttgcttgcgc gcgcgtcttt gcccggcgtc ttacccatcg cgctggcgct tgcggtcacg
     7981 tccaaaagat cgtcggtgat ttgaaacagc agcccaaggt ttcgaccgta atcggtgacc
     8041 gcttccaatt cctcatcgtt cgcgccgccg atgattgcgc cgcaccgtgc ggcgccacag
     8101 atcagcgcgc ccgtcttttg cacatggatc tcatcaagtg cggtcgcgtc cactgattgc
     8161 gcctctccat ccagatccag cgcctgacct gagaccatcc cgctcggcgt acccgccgca
     8221 cgcgaaagtt ccgcaatgat tcgcacgcgg atttcggccg aaagattttc gctttgcgcg
     8281 atcgtttgaa acgcgagtgc ttgcagcgcg tcaccggcga ggatcgccgt cgcttcgcca
     8341 aacttgatgt gacaagtcgg gcgcccgcgc cgcagatcat catcatccat cgagggcaga
     8401 tcgtcgtgaa tcagcgagta ggtgtgaatc atctcgaacg cgcacgccgt cctcatcaac
     8461 tgatcggttg ccgccccgaa agctccgccc accgcgagca ccagcgccgg acgaaagcgc
     8521 ttgccgccgg caaatacact ccagcggatg gcgctgtgaa gacgcgtggg gtcgtccgtc
     8581 tctttgggga ttagccgatc gagttcctgg tcgatgagta agcgagtggc agcgaggaat
     8641 tctttcgcgt ttgttgtgag gctcgagtct gcgatcgtct tcacgattct ttaagcgttt
     8701 cttaattgag acttctgcag tacatcagtt cagtatcaag gatcgtgtca tcgcctgcga
     8761 tatgagaact gattaccact tgaaagtgcc gatcgagatt tgcccgagag agttgagtta
     8821 gtttttcaga tgaggtgatg aacttaacaa cacccaaatt accaacaccg taattgcttg
     8881 caataacaaa tacgacttgc tggccgtttt cgggcgatct aattcgggct acgaagccga
     8941 catccgattt caggtgtccg gtgtcgccaa acttcgattt gaatactaca tccttttcct
     9001 tggtgccgat ggcgcgttct gaatgctggg aatacggtgc gtcgagaaac cagatcggaa
     9061 ttaagtctct cttgccaatc tctgctgtta aggggttagg caatggcccg cctaagctaa
     9121 caacgggaaa gcgccaatct atagagttcg tttcagtgac tatttcaacg tctttatagt
     9181 agctctgcag aaatcctcga agctcgccca aagtaagagc atcttgcaag tttagcagag
     9241 gttcgacttc accgaagtcc gttaacttgt ctctccacat tccgcagtac agatagattc
     9301 tagccgaatc gttcggtacc cagaaccatt tcacaacccg tcgcttgtac acggatttgt
     9361 agtgctgata tccgcgcgcc attagaaagc cgacaaaggc ggccaacaga ttaatgacta
     9421 agtctgctag caattgagtc tctttggttc catgccaact aaaagatcca ggtgtcagga
     9481 taggtcttgg tcgtctgtcg cgctcaactc tttgtcagcg tcgaacgggc ggattgtcgg
     9541 ccggccctgg ttgtcgcggg tcaggacctc aatgcggcgt tcagcttcgt tcagtcgctc
     9601 ctggcacgcg cgcgaaagtt ttacgccctg ctcgaaaagg tcgaggctct tttccaaagg
     9661 cagatcgcca cgctcaagct cgcgcacaat tcgctcgagt tcttccagcg acgtttcaaa
     9721 gttttgagag ttgttcttgc tcatat
//
LOCUS       DATDBY010000246         3194 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_428082, whole genome shotgun sequence.
ACCESSION   DATDBY010000246 DATDBY010000000
VERSION     DATDBY010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3194
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428082"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..440)
                     /locus_tag="VIT19_04620"
     CDS             complement(<1..440)
                     /locus_tag="VIT19_04620"
                     /inference="COORDINATES: protein motif:HMM:NF036537.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LodA/GoxA family CTQ-dependent oxidase"
                     /protein_id="HEY5838298.1"
                     /translation="MPTIYRIHPGIGIARLGNSPDAFCISPEQPAVLPLDCDPRGNPL
                     MSPDGTQEMRIWSFKDAEGRMKRQAARFQIWAYDEKSPQGRPLKLGDPIEGGGNAGTL
                     VNIQWRVYLANKKSSWYEFHQLQGEHGYDPNHPRRNAAITDPNAR"
     gene            complement(463..2553)
                     /locus_tag="VIT19_04625"
     CDS             complement(463..2553)
                     /locus_tag="VIT19_04625"
                     /inference="COORDINATES: protein motif:HMM:NF012486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosinase family protein"
                     /protein_id="HEY5838299.1"
                     /translation="MADTKPITRHERVKQILDQAAAGGSTNYDGKGLFWQLPLPELLE
                     VKIHGVRMIAPAAAAAPVASCCHGEAAPVSRSANSGLIRGLRGEAPFDGTQYPPLPWG
                     GRPVAADDISFIADWIDADCPAEDHQTSFDVTGTATTTREKIEPANVEVEARSFDVFE
                     GSPNEYAYRYGEVKQRMNIDCMPEAEINKLRNAFRQMYRLNKWPEDRRSYNNMALIHQ
                     NHCQHGWERFLPWHRIYLYEFEQVLQDIDPSVTMPYWDFTMPQYCPQHPEKGEIIPPS
                     FKAYLNEKSIDYLENEAEPKLPAADARKLTKEMIEPGLRYTSQTAFFNAVQKITGNDY
                     SQSPARESFLKALLAANALWYPLRYPAEYQGGTINTVIHYHYPTADDMQQILALRTFR
                     DFGGGSFYDDSFGFLDQNPHNTMHIWTGGMNPNYSPAQESQDASAKPTMASQNRNRTV
                     RVAGRRFHSMDDLTLQPQYGDMFSNLTASYDPVFWPIHANIDRTWHEWQLGNPHALPA
                     DPDSVLTPWSYTIADTLNMARFGYEYVKCAFLIPVGLETPVGRFVSKPVPLPDALRGS
                     FQQAEVRLHRVPQLPRSCFIRVFLNLPGASATTSIEDPHYAGYLAIFGHADCIGGPGH
                     CDLPPSRQRRYDQRPRHHNTPRNHRVNVTKTAQRLMEKGAKSLQITLVVIGADYCEDS
                     ELLRLEGVSLDFID"
     gene            complement(2582..3085)
                     /locus_tag="VIT19_04630"
     CDS             complement(2582..3085)
                     /locus_tag="VIT19_04630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838300.1"
                     /translation="MPERRGARTRIRARGGLRGDQLRVVAKHRRTTLLTVTSVLVALA
                     PKCPVCFLAYFGIFGVTAASASAYRSWLPPITAIWLALTVSLLWVRATGWRRYAPVAI
                     GLVAAVGIFTARFVVASPQLVYAGIAMLVGAALWSSWLRMSVAATACSDCGEEARLTP
                     EERESPA"
BASE COUNT          647 a          924 c          958 g          665 t
ORIGIN      
        1 cgcgcgtttg gatcggtaat ggcagcattc cggcgcggat gatttggatc gtagccatgc
       61 tcgccctgaa gctgatgaaa ctcgtaccac gacgatttct tgttcgccaa atagacgcgc
      121 cattgaatat taaccagcgt gccggcgttg ccgcccccct cgattggatc acccaacttc
      181 agcggccggc cctgcggact tttctcgtcg tacgcccaaa tctgaaagcg cgcggcctgt
      241 cgcttcatgc ggccttccgc atctttgaaa gaccaaattc tcatttcctg cgtaccgtcc
      301 ggcgacatga gcggattgcc gcgtgggtcg caatcgaggg gcaggaccgc cggctgctcc
      361 ggagaaatgc agaaggcgtc gggactattg ccgagccgag caatgccgat gcccgggtgg
      421 atgcgataga tggtaggcat agtgggtcgg aactccttcc gatcaatcga taaagtcgag
      481 cgaaacacct tcgagccgca gcagctcgga atcttcacag taatcggcgc caatcacgac
      541 cagagtgatc tgtaatgact tggctccttt ttccataagc cgttgggccg tcttggtgac
      601 gttgacgcga tgattgcgcg gcgtgttgtg atgacgcggc ctttgatcgt aacggcgctg
      661 gcggctgggc ggcagatcgc agtgccccgg accgccgatg caatctgcgt gaccgaagat
      721 cgccagatag ccggcgtaat gcggatcttc aatcgaggtc gttgcgcttg ctcccggcag
      781 attcaggaac acacggatga agcaggagcg cggcaattgc ggcacgcgat gcaagcgaac
      841 ttccgcctgt tggaatgaac ccctgagcgc atccggaagt ggaactggct ttgatacgaa
      901 gcggcccacc ggcgtctcga gtccgaccgg aatcagaaaa gcacacttga cgtattcgta
      961 cccgaagcgc gccatgttca gcgtgtcggc gatcgtgtag ctccacgggg tgagcaccga
     1021 atccggatca gccggcaacg cgtgtggatt gccaagctgc cattcgtgcc aggtgcgatc
     1081 aatgttcgcg tggatcggcc agaagaccgg atcgtacgac gcggtcaggt tgctgaacat
     1141 atcgccatat tgcggctgca acgtaaggtc atccatcgag tggaatcgcc ggccggccac
     1201 gcgcaccgtg cgattccggt tttgactggc catcgtcggc tttgctgacg cgtcctgaga
     1261 ttcctgcgca ggcgaataat tcgggttcat gcctcccgtc cagatgtgca tcgtgttgtg
     1321 cggattctga tcgaggaaac cgaacgagtc gtcgtagaag ctgccgccgc cgaaatcgcg
     1381 aaaagtgcgc agcgccagga tttgctgcat gtcgtcggcg gtggggtagt gataatggat
     1441 cacggtgtta atggttccgc cctggtactc agccggataa cgaagcggat accacaaagc
     1501 gttcgcggcc agcagggctt ttaaaaaact ctcgcgggcc ggcgattggg aatagtcgtt
     1561 tcccgtaatc ttttgaactg cattaaagaa cgcggtctgc gatgtgtagc gcaggcccgg
     1621 ctcgatcatc tctttcgtga gctttcgggc gtcggcagcc ggcagcttgg gctcggcttc
     1681 attttcgaga tagtcgatcg acttctcgtt cagataagcc ttgaaagacg gcgggatgat
     1741 ctcgcccttc tccggatgct ggggacaata ttgcggcatc gtaaagtccc aatacggcat
     1801 cgtgacgctc gggtcgatgt cctgcagcac ttgttcgaat tcataaaggt agatgcgatg
     1861 ccacggaaga aaacgttccc agccgtgctg gcaatggttc tggtgaatca aagccatgtt
     1921 gttgtagctg cgccgatctt ccggccattt gttgaggcga tacatctggc gaaaggcgtt
     1981 gcgaagtttg ttgatttcag cttccggcat gcagtcgatg ttcatccgtt gcttcacttc
     2041 gccatagcgg taggcatact cgttgggcga gccttcaaaa acatcgaagc tgcgcgcctc
     2101 gacctcaacg ttggcaggtt caattttttc gcgcgtggtc gtggcggtgc cggtgacatc
     2161 gaacgaggtc tgatggtcct ctgccggaca atcagcgtcg atccagtcag cgatgaagct
     2221 gatgtcgtct gccgccaccg ggcgaccgcc ccagggcagc ggtggatact gcgttccgtc
     2281 gaacggcgcc tcgccacgca ggccacgaat caaccccgag ttagcactgc ggctcactgg
     2341 ggcggcctcg ccgtgacaac acgaagcgac gggagcagcc gcggcagcag gcgcgatcat
     2401 gcgcacgcca tgaatcttga cctccagcaa ttcgggtaat ggcagctgcc aaaacaggcc
     2461 tttgccgtcg taattagtcg agccgccggc cgctgcctga tcaaggatct gtttcacgcg
     2521 ctcgtgacgt gttatcggtt tagtgtcggc catgattttt ccttttctgt aacggcggcg
     2581 cttaggccgg tgactcacgc tcctcgggtg ttagtcgtgc ttcctcacca caatccgaac
     2641 acgcggttgc ggctactgac attcgcaacc atgagctcca cagcgccgcg ccaaccagca
     2701 tcgcgatgcc ggcgtagacc agctgcggac tggcgacgac gaacctcgcg gtaaagatgc
     2761 cgaccgccgc caccagcccg atggcaaccg gtgcatacct gcgccatccc gtagctcgca
     2821 cccacaacag cgagacggtt agggcaagcc agatcgccgt gatgggcggg agccatgacc
     2881 gataagcaga agccgatgcg gcagtcactc cgaagattcc aaagtacgcg agaaagcaga
     2941 ccgggcactt cggcgccagc gccactaaga ccgaggtcac agtaagcagc gtcgttcgcc
     3001 gatgcttggc cacgactctc agttgatctc ctctcaggcc gccacgcgca cggatcctgg
     3061 tccgtgcgcc gcgacgttcc ggcatcagtg gtgcgagtac ggcagtggcg ccggcgaaac
     3121 ctcgacgact gtcatcatcc cgcgatcctc gtgcgccaga atgtggcagt ggagtacgta
     3181 gtaacctgcg tagt
//
LOCUS       DATDBY010000247         2250 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2881868, whole genome shotgun sequence.
ACCESSION   DATDBY010000247 DATDBY010000000
VERSION     DATDBY010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2881868"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1350
                     /locus_tag="VIT19_04635"
     CDS             <1..1350
                     /locus_tag="VIT19_04635"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY5838301.1"
                     /translation="TTPQYLEPSADGYLRLGERTIVLRGDDNLQLDFRGRSPAFRKIS
                     AADVLFKQGQLPADLFRDRIVLIGASNIDAPDLFATPHYEYSALPRLFDRGLPVAPKR
                     MPGVEIHANAAATLLHGKMLKRPTYTRQILVVLIILAVVALAVFRLRPLLAFLAVILV
                     AALSLAISSWAFNRHGVVLPLASAWLGMAVLTPVGLGVRYARERLLRSETEAERVQVM
                     EIFSRFVSGDVAVAVWEKRGQASLLGENRTVTIIFTDIRGFTTLSESAQSEEVVEWLN
                     DYFGRMNEIVERHGGHINKYIGDGLMIVFGAPVDRGDREEALAAVECGLEMLDEVERM
                     NADWQGLGRPVVKIGCGIHTGLATCGVVGAERRLEYTIIGDTVNLSARLESTTKEFSV
                     PILISEPTAKLIESNYDVQPLGEVKVKGKTQNTTVFTVSRKGATASAAVTGDNQHAG"
     gene            1747..>2250
                     /locus_tag="VIT19_04640"
     CDS             1747..>2250
                     /locus_tag="VIT19_04640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838302.1"
                     /translation="MIIHPTLSRATLFILFCLSLSFAHLPAYAASSAGEAGAVPQEAK
                     PRKPLPKPPTGSRGFEQGSRDASSRLISAGATRGPLKPIAPYEGLAYDARPFFAWAPS
                     PGAASYRFTLRAGADSSAAIVYETDVKTAQFSYPADAPPLTPGQLYSWRVSTAGVLER
                     RQGPIVTF"
BASE COUNT          473 a          637 c          661 g          479 t
ORIGIN      
        1 acaaccccgc aatatcttga gcccagcgcg gacggatacc tccgcctcgg cgagcgcacg
       61 atcgttctgc gcggcgatga caacttgcaa ttggattttc gcggacgctc gccggcgttt
      121 cgaaagatct ctgccgctga cgtcctcttc aagcagggtc aacttccggc cgacctgttt
      181 cgggatcgaa tcgttttgat tggcgcgtcg aacatcgatg cgccggattt gttcgccacg
      241 cctcattacg aatactccgc cttgccgcgc ttgtttgatc gcggcttgcc cgtagcacct
      301 aaaaggatgc cgggcgttga gattcacgcg aatgccgcgg cgaccctgct gcatgggaaa
      361 atgctgaagc gcccgacgta cacacgacag attctcgtgg tgctaatcat cctcgctgtc
      421 gtcgcgcttg ccgtttttcg tttgcgtccg ttgctggcgt ttctggccgt gatcctggtt
      481 gccgcgctct cgctcgcaat ttcgtcgtgg gctttcaacc gccacggcgt cgtgttgccc
      541 ctcgccagtg cctggctcgg aatggctgtg ctgacgccgg tcggtttggg cgtgcgctac
      601 gcgcgcgagc ggctcttgcg cagcgagacc gaggctgagc gtgtgcaggt catggagatc
      661 ttttctcgat ttgtgtcggg agatgtggcc gtagcggttt gggaaaagcg gggccaggct
      721 tctctcttgg gtgagaatcg caccgtaacg atcatcttca cggacatcag aggctttacg
      781 acactgtctg agtccgctca gtcagaagaa gtcgtcgaat ggctgaacga ctactttggg
      841 cggatgaatg aaatcgttga gcgtcacggg ggccacatca acaaatacat cggcgatggc
      901 ttaatgatcg ttttcggagc gcccgtcgat cgcggtgacc gcgaagaagc actcgccgca
      961 gtcgagtgcg gactggagat gctcgacgaa gttgagcgga tgaatgcgga ctggcaaggc
     1021 ctgggccgcc cggtcgtgaa aatcggttgc ggcattcaca ccggtctggc cacctgcgga
     1081 gtggtaggcg ccgaacggcg gctcgaatac acgatcattg gcgataccgt gaatctttcc
     1141 gcgcggctcg agtcgacgac caaggaattc agcgtgccaa ttttgatcag tgaaccaacc
     1201 gcgaagctaa tcgaaagtaa ttatgacgtg cagccgctcg gcgaagtaaa agtgaaaggc
     1261 aagacgcaaa atacgactgt cttcaccgtc tcgcgaaagg gcgcaaccgc gagcgccgcg
     1321 gtcacaggcg acaatcaaca cgcaggttga cgcaaagacc caagtcgcaa aggaacgcaa
     1381 agataagata ggacagggct ttgcctcaaa acccgaaaag gcagctctca ttcacaccgg
     1441 gctttagccc ggtgataagc ggagtacgag actagtgaac cgttttaacg gtttactggt
     1501 cttctcaaga ccatcaggcg attgactacg aaggactggc gctgcaaacg acacggagaa
     1561 accgttgaaa cggttcctat gattctcaca gtctttcatc accgggctga agcccggtgt
     1621 gaatgagagg aagactctca aacttttgag gcaaagcaag taggacacca cgtttcagtt
     1681 gtgctatggc gcagtcggtg tgaataatag tcaccccgac tacttagtca gaacaaggaa
     1741 tcttttgtga taatccatcc caccctcagc cgcgccacac tgttcatact gttttgcctg
     1801 tcgctcagtt ttgcgcacct gccggcttat gcagccagca gcgctggcga agcgggcgca
     1861 gttccgcagg aggcgaagcc acgcaaacca ctgccgaagc cgccgactgg ttcgcgcggt
     1921 tttgaacaag gcagtcgcga tgcgtcttca cggctgatct ccgcgggagc gacgcgtggg
     1981 ccgttaaaac caatcgcacc ctacgaagga ctcgcgtacg atgcgcggcc attctttgcc
     2041 tgggcccctt cacccggcgc ggcgtcgtac cgcttcactt tgcgagcggg cgcggattca
     2101 tccgccgcga tcgtttatga gactgacgtc aagaccgcac agttttcgta tccggccgat
     2161 gcgccgccac taacaccggg ccaactttac tcctggcggg tttcgacggc tggtgtgtta
     2221 gagcgaagac aggggccgat cgtgacgttc
//
LOCUS       DATDBY010000248         2536 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_222565, whole genome shotgun sequence.
ACCESSION   DATDBY010000248 DATDBY010000000
VERSION     DATDBY010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2536
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222565"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1185)
                     /locus_tag="VIT19_04645"
     CDS             complement(<1..1185)
                     /locus_tag="VIT19_04645"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEY5838303.1"
                     /translation="MSNSTQTNLATVEHQVEARSASLKKELGLFDLVLTQVVFVVGTI
                     WVGWAAQLGRHQMAYWVLAIITFYLPLAAVVIFLNRLAPLEGGVYQWAKVAFNDFVAF
                     MVAWNLWIFGISVMSGIGLIIKKNIAYAIGPRAAWMHDSKLMTIGVCVVLTITIIAAS
                     RRGLVFGKWVQNVGGLFLLVTFATLILLPFITGNLANYHPFATSFPEVSSQNINVFSK
                     LAVGALSGFEYIAILAGECRAPARNISRSVLIAAPIIVVMFVLGTASVLAFVAPEQVD
                     LIGPIPQVLSLGFNSFGWVSTLVSITIFGVAARQIALMSIYFAGNTRLPMVAGWDNLL
                     PNWFSRLHKRYRTPVNSILFVGVITLAFSLIPLIGVLEEEAFQIQDNAATMFYALIYV
                     VLF"
     gene            complement(1351..2157)
                     /locus_tag="VIT19_04650"
     CDS             complement(1351..2157)
                     /locus_tag="VIT19_04650"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY5838304.1"
                     /translation="MRIHVSVIGVVMLLVGVSNAAAQHAETQSAQDDELLTDTIHFTQ
                     RVSVTICCGPGVPISESASGEPIPTKPATSINPSSFSNCDPRAGELFLLARRLLSERG
                     EIEIDVRLQTFTVTDRRAAIESIRQLVESYTLRSSSPELADPDDAKAIAAIRAVLDAQ
                     VAAWNRGDLEGYMDGYQRSPDIVFISGDRVTRGWKTVLERYKRSYDTREKMGVLTFSD
                     VEITILSKDAALVFGRWQLRTKDEPHGRFTLLFRRTKDGWRIVHDHTSSA"
     gene            complement(2317..>2536)
                     /locus_tag="VIT19_04655"
     CDS             complement(2317..>2536)
                     /locus_tag="VIT19_04655"
                     /inference="COORDINATES: protein motif:HMM:NF018626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1287 domain-containing protein"
                     /protein_id="HEY5838305.1"
                     /translation="GKEVATTGSADTFLPGDIVTWDLGGGVDHVGIVTNVWYKPSQRY
                     LIVHNIGSGTRMEDVLFAWKITGHYRYF"
BASE COUNT          609 a          713 c          715 g          499 t
ORIGIN      
        1 gaaaagcacg acgtaaatca acgcgtagaa catcgtcgcg gcgttgtcct gaatttggaa
       61 agcctcctct tccagtactc cgatcagcgg tatcagactg aaagctaaag taatcacgcc
      121 tacaaacaag atggaattca ccggcgtgcg atatcgcttg tgcagacggc tgaaccagtt
      181 cgggagaaga ttgtcccaac cagcgaccat cggtaggcgc gtgttaccgg cgaagtagat
      241 gctcatcaga gcgatctggc gcgcggccac gccgaagatc gtgatcgaca ccagcgtcga
      301 tacccaacca aacgaattaa agccaagact cagcacctgc ggaatcggac cgatcagatc
      361 gacttgttcg ggggcgacga aggccagcac tgaggcggtg cccagcacga acatgacgac
      421 gatgatcggc gcggcgatca gcactgaccg gctgatgttt cgcgccggtg cgcgacactc
      481 acccgcgaga atagcgatgt actcgaagcc ggacagcgcg cccacagcga gcttgctgaa
      541 gacgttgatg ttctgactgc tgacttccgg aaagctggtt gcgaacggat ggtagtttgc
      601 gaggttgccg gtgatgaagg ggagcaggat caaggttgcg aacgtgacca gcaggaaaag
      661 cccgccgacg ttctgcaccc acttgccaaa aaccaaacct ctccgcgacg ctgcaatgat
      721 cgtgattgtc agcacgacgc aaacgccgat ggtcatcagc ttgctatcgt gcatccacgc
      781 cgcccgcggg ccgatggcgt aggcgatgtt cttcttgatg atcaggccga tgcccgacat
      841 caccgagatg ccaaagatcc agaggttcca cgccaccatg aacgcgacga agtcgttgaa
      901 cgcaaccttc gcccattgat agacaccgcc ttcaagcggc gcgaggcggt tcaggaagat
      961 cacgaccgcc gccagaggca gatagaacgt gatgatcgcg agcacccagt acgccatctg
     1021 atggcgtccg agctgcgccg cccagccaac ccaaattgtg ccgacgacaa agacgacttg
     1081 cgtcagcaca agatcgaaca gcccaagttc ctttttgagc gacgcgctgc gcgcttcgac
     1141 ctggtgttcg acggtggcga gattcgtttg cgttgaatta gacatgtcag aagccgaccg
     1201 taaggaaggg catcttggcg acgggattct aaccacaaag ccacaaagac acgaagcaaa
     1261 gaactaaaag gctttgtgac tttgtgtctt cgtggtgaag aattctaacg cttgccctcc
     1321 ctgacggttg ggctgctgac gcgctcgtga ttacgcactc gaagtgtgat cgtgaacgat
     1381 tctccaaccg tcctttgttc ttctgaacag caacgtgaag cgcccgtgcg gctcgtcttt
     1441 cgtgcgcaac tgccaacggc caaaaacgag ggcggcgtcc ttgctaagaa tcgtgatctc
     1501 aacatcggaa aacgtcagca cacccatctt ctcgcgcgtg tcgtagcttc gtttgtagcg
     1561 ttcgaggacg gttttccagc cacgggtgac gcgatcgccg gagataaaaa cgatgtcagg
     1621 cgagcgttga tagccgtcca tgtaaccttc aagatcgccg cgattccagg ccgcaacctg
     1681 cgcgtcgagc actgcacgga tggcggcgat ggctttggca tcatcaggat cggccagctc
     1741 aggcgatgac gatcttaggg tgtaagactc cactaattga cggatcgatt caattgccgc
     1801 tcgccggtcg gtgacggtaa acgtctgtag gcgcacatca atctcaatct ctccgcgttc
     1861 agacaacaga cggcgcgcca acaagaacaa ctcaccagca cgcggatcgc agttcgagaa
     1921 cgacgatggg ttgattgatg tcgcaggttt cgtcggaatc ggttcgcccg aagctgattc
     1981 tgagatcggc acgcccgggc cacagcagat agtcacactc actcgttgcg tgaaatggat
     2041 ggtatcggtc aacagctcgt cgtcttgcgc tgattgcgtc tccgcatgct gcgcagcggc
     2101 gttagaaaca ccaaccagaa gcattacaac gccaataaca gaaacgtgaa ttctcatcct
     2161 gatctcactc gaagaaggaa agcccatgtc agtgcgtctt ataacatgac gcgcctgacg
     2221 ggggaagtag attacagaac cgcgtgcggt agcgagcggg acaaggactc aagctgcatt
     2281 ggtcgagtct ttgacccgct cactctgtat tagtgcctag aagtatcgat agtggccggt
     2341 gattttccac gcgaacagaa cgtcttccat gcgcgtgccc gatccgatgt tgtgaacgat
     2401 gagatagcgc tgcgaaggtt tgtaccagac gttggtgacg atcccgacgt gatcgacgcc
     2461 gccgcccagg tcccacgtca cgatgtcgcc gggaaggaaa gtatcggcgc tgccggtcgt
     2521 cgcaacctct ttgcct
//
LOCUS       DATDBY010000249         4414 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_220662, whole genome shotgun sequence.
ACCESSION   DATDBY010000249 DATDBY010000000
VERSION     DATDBY010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4414
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220662"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="VIT19_04660"
     CDS             <1..278
                     /locus_tag="VIT19_04660"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEY5838306.1"
                     /translation="PDTELDRLRTAVQDYEKKLFEAAELVARVRHEINNPLAALLGQA
                     QLLLREDLSEKSRRRAETIEGQAKRIEQIVGELRAVQAPPTTVNNQG"
     gene            complement(295..993)
                     /locus_tag="VIT19_04665"
     CDS             complement(295..993)
                     /locus_tag="VIT19_04665"
                     /inference="COORDINATES: protein motif:HMM:NF014708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEY5838307.1"
                     /translation="MIKIRKSEERGHFDLGWLDTYHTFSFDQYYDPAHMHFRSLRVIN
                     EDRVAPAKGFPTHSHRDMEIITYILSGELEHRDSMGSGGVIRPGDVQRMSAGTGVAHS
                     EFNPSQAEAVHLLQIWIMPRARNLPPGYEQKFFSEEERRGRLRLVASEDGRDGSVTIQ
                     QDARLYATIFPPGSSIEHTLPDKRHAWIQVARGNLNLNGHELKQGDGAAVSNEHQLRL
                     AANDETEVLLFDLA"
     gene            complement(1145..1876)
                     /locus_tag="VIT19_04670"
     CDS             complement(1145..1876)
                     /locus_tag="VIT19_04670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838308.1"
                     /translation="MNDRHPIIVAVSGLSSNTGKTTLVCELLERLPGWEAIKLTRGHY
                     RSCGKDPNGCCVSDLLRDEPLIRSGRASNYETGKDTGRFWDAGAANVHWVIVGEDQVE
                     AGINLALSRVQSAGVIVEGNSFLDYVQADYAIMCARAGENKLKTSSKRTLAKADTIYL
                     STIDDSDRETAIRVFDGWRDGLSIGLQTDGLHIYTRHDLPKLIETIQSLHQDPTKMEP
                     SEEPSKMAADSSPGRKPGDRQPLFP"
     gene            complement(1982..2461)
                     /locus_tag="VIT19_04675"
     CDS             complement(1982..2461)
                     /locus_tag="VIT19_04675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002363658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEY5838309.1"
                     /translation="MNPKTKSERYEQLAAQLSSLLAGECDLIANAANFSSLLFHSLPD
                     LNWAGFYFAKDDELVLGPFQGQPACVRIKIGQGVCGAGAAKCETVIVPNVHEFPGHIA
                     CDSASNSEIVVPLLKDSHLIGVLDLDSPNFQRFDDQDARGLESLVRILLASTNVKVP"
     gene            complement(2719..>4414)
                     /locus_tag="VIT19_04680"
     CDS             complement(2719..>4414)
                     /locus_tag="VIT19_04680"
                     /inference="COORDINATES: protein motif:HMM:TIGR01701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FdhF/YdeP family oxidoreductase"
                     /protein_id="HEY5838310.1"
                     /translation="SGTGMKETLGFGKGTVTLEDFTRCDAIFVIGQNPGTNHPRMLST
                     LLAAKRRGCRIVHINPLPEAGMTRFKHPQEVWKWLGSGTKLADLWLQVRINGDVALLK
                     GIMKEVIDAEDRQAGGVLDHDFIKQYTTGFEEFRDALRPVPINDIVEQSGITKAQIEE
                     AARIFLESERVIFCWAMGLTQHKNAVGNIQEIVNLMLLRGQMGKPGAGLCPVRGHSNV
                     QGDRTMGVWEQPTAQFLDSLEKEFKFSPPRRHGYDTVHAIQAMHDASAKVFFALGGNF
                     LSATPDTEFTAEALRRCRLTAHVSTKLNRAHLITGQKALILPCLGRTEIDQQATGPQF
                     VTTENSMAVVEEWRGRLEPASEHLLSEPAIVAGLAKATLGSRSTLDWDALIGNYDRIR
                     EHIEHVIPDFDDYNARVRQPGGFYLPNPIRDRKFITPDGKAHFTVHPLPEIKLAPDQF
                     LMMTMRSHDQFNTTIYGLDDRYRGIHNGRRVVFLNPEDIRSSELEDGQAVDLISHFDG
                     EERIARQFTVVPYSIPRRCAATYFPEANVLVPLRHFADKSHTPASKSVVISIRPSK"
BASE COUNT          937 a         1277 c         1196 g         1004 t
ORIGIN      
        1 ccccagacac cgaattggac cgtttgcgta ctgccgttca ggattacgaa aagaaactct
       61 ttgaggccgc tgagttagtc gcgcgcgtca ggcatgagat taacaatcca ctggcagcct
      121 tgttgggcca ggcgcagtta cttttgcgtg aagacctgag cgagaagtcg cgccggcgcg
      181 cggaaactat cgagggtcag gccaagcgga tcgaacaaat agtgggagag ctgcgtgcgg
      241 tccaggcgcc gcccaccaca gtcaataatc aaggatagtc cgcccccgtg cctactaagc
      301 gagatcaaac agaagcactt ctgtttcgtc gttcgcagcg agtcgcagtt ggtgttcgtt
      361 gctgaccgcg gcgccgtcgc cttgctttag ttcgtgcccg ttgaggttga gatttccgcg
      421 cgcgacttga atccaggcgt gacgtttgtc aggcaacgtg tgctcaatcg atgagccggg
      481 tgggaagatc gtcgcgtaca gacgcgcgtc ctgctgaatt gttactgagc cgtcgcgacc
      541 atcttcggag gccaccaaac gcaagcgccc gcgacgctct tcttccgaaa agaatttctg
      601 ctcatagccg ggcggcaggt ttcgcgcccg cggcatgatc caaatttgca acaggtgcac
      661 cgcctcagcc tgcgagggat tgaattcgct gtgcgcgacg cctgtgccgg cgctcatgcg
      721 ctgcacatcg ccgggacgaa tgaccccacc actgcccatg ctgtcgcgat gctccagctc
      781 gcccgagaga atgtacgtga tgatttccat gtcgcggtgc gagtgcgtcg gaaaaccctt
      841 cgccggggca acccgatctt cgttgatgac acgcaggctg cgaaagtgca tgtgggccgg
      901 atcgtaatac tgatcgaacg agaaggtgtg ataagtgtcg agccagccaa gatcaaagtg
      961 accgcgttct tctgatttgc gaattttaat catagatgga gcagcttctt cgtccgcatt
     1021 agtgaacgtt tgaaagtagc ccagcgcttc agcgctgggt ttgcgattgc aaaatacgct
     1081 agcccgcgaa gcgggcgaca gaattcgtct taaaaacgag aggtctgtcg cccgcttcgc
     1141 gggcttatgg gaataatggc tgccgatccc cgggcttacg cccggggcta ctgtctgccg
     1201 ccatcttcga gggctcctcg gatggttcca tcttggttgg gtcttgatgc agcgactgaa
     1261 ttgtttcaat caacttcggc aagtcatgtc gtgtgtagat gtgaagcccg tcggtttgca
     1321 gcccaatcga caatccatcg cgccacccgt cgaagactcg aattgccgtc tcccggtctg
     1381 aatcgtcgat tgtcgataaa taaatcgtgt cagcttttgc cagcgttctt ttcgatgacg
     1441 tcttcaattt gttttcgccc gcccgcgcgc acatgatcgc gtaatccgcc tggacatagt
     1501 cgagaaagct gttgccttcg acgatcacgc cggcggattg cacgcgcgat aacgccaagt
     1561 tgattccggc ttcaacttga tcttcgccga cgatgaccca gtgcacgttc gccgcgccgg
     1621 cgtcccaaaa acgtcccgta tctttacctg tttcgtaatt gcttgctcgt cccgaacgaa
     1681 tcagcggctc gtctcgcagc agatcgctga cgcaacagcc gttcggatct ttgccgcatg
     1741 aacggtaatg gccacgcgtg agcttgatcg cttcccagcc cggcagtcgt tcaagcaatt
     1801 cacacacgag cgtggtcttg cccgtgttcg acgacaaacc actgacagcg acgataatgg
     1861 gatggcgatc gttcatgttt tggtagcgag ttttcgcagg gcccgttagg gcctagaacc
     1921 aaacgctgac taaatcagcg ctggattcgc aggacacatc gtgactataa acatttggct
     1981 cctacggaac ttttacattt gttgatgcga gcaatattcg aaccaaactc tccaggcctc
     2041 gcgcgtcttg gtcatcaaat cgctgaaagt taggactatc gaggtccagc acaccgatca
     2101 gatgcgaatc tttcagcaac ggtaccacga tctccgagtt cgaagcgcta tcgcaggcaa
     2161 tatggcccgg aaactcgtgc acgttcggca cgatcaccgt ttcgcatttt gccgcgcccg
     2221 cgccgcacac accctgccca atctttatac gcacgcacgc cggttggccc tggaacggtc
     2281 ccagcactaa ctcgtcgtcc ttggcaaaat agaatcctgc ccaattcaga tcgggcaatg
     2341 aatgaaaaag cagggaagag aagttcgccg cgttcgcaat cagatcgcac tcaccggcga
     2401 gcaagctcga gagttgcgcc gcgagttgct cgtaacgttc gcttttagtc ttaggattca
     2461 cagtggattc ttatccattt tgaggctttg cctcagcaca gtgcggtaag gctctgcctt
     2521 accgtcacgc tcatcaacat gtttggaggc tacgcctccg ccgaggcgca gcctcggaaa
     2581 agtctaaaac atcagacgga aagccggagg ctttccgcaa tgtgcggcgg caaagccgct
     2641 ggcttcattc accatcgaca atcgccaaac agaacccggt cgctaccgct cgcggtactg
     2701 actccgttgc tgatgtgatc acttgctcgg tcggatacta atcaccaccg atttcgatgc
     2761 cggagtgtga ctcttgtccg cgaagtggcg caacggcacc agcacgttcg cttccggaaa
     2821 atacgtcgcg gcgcagcggc gcggaatgct gtacggcacg accgtgaact gccgtgcgat
     2881 gcgttcttcg ccatcgaaat ggctgatgag atcgacagcc tggccatctt ccaattctga
     2941 cgaacgaatg tcttcgggat taaggaacac aacgcgacgg ccgttgtgaa tcccgcgata
     3001 acgatcgtcc aggccgtaaa tcgtagtgtt gaattggtcg tggctgcgca tcgtcatcat
     3061 cagaaactga tccggcgcca gtttaatttc cggcagcgga tgaacggtga agtgcgcttt
     3121 accatctggt gtgatgaact tccggtcgcg aattggattc ggcagataaa agccgcccgg
     3181 ctgccgcacg cgcgcgttgt aatcgtcgaa atccggaatc acgtgctcga tgtgttcgcg
     3241 gatgcgatcg taattgccga tcaaagcgtc ccaatcgagt gtactcctac tgccgagggt
     3301 cgctttcgcc agaccggcga caatcgccgg ctcgcttaac aaatgttctg atgcgggttc
     3361 caggcgacct cgccactcct caacgacggc cattgagttt tctgtcgtca cgaactgcgg
     3421 accggtggct tgctgatcaa tctcagtgcg gccgagacat ggcaggatca aagccttctg
     3481 ccccgtgatc aagtgcgcgc gattgagctt cgttgaaaca tgcgcggtca gacgacaacg
     3541 tcgcaaggct tcagccgtga attccgtgtc cggcgtcgcg gacagaaaat ttccgcccaa
     3601 cgcgaagaag actttagccg atgcgtcgtg catcgcttgg atcgcatgca cagtgtcgta
     3661 gccgtgtcgt cgcggcggac taaacttaaa ttctttttct aagctgtcga ggaattgcgc
     3721 ggttggttgc tcccaaacgc ccatcgtgcg atcgccctgc acgttgctgt gaccgcgcac
     3781 cgggcacagt cctgcgccgg gttttcccat ttgtccgcgc agcaacatca aattgacgat
     3841 ctcctgaatg ttaccgaccg cgttcttgtg ctgcgtcaag cccatcgccc aacagaaaat
     3901 cacacgttcg gattcaagga agatgcgcgc ggcttcttcg atctgcgcct ttgtgatgcc
     3961 tgattgttcg acgatgtcgt tgattggaac cgggcgcaac gcgtcccgga actcttcaaa
     4021 ccccgtcgtg tactgcttta tgaaatcgtg atcgagaacc ccgcccgcct gacggtcttc
     4081 ggcatcaatg acttccttca tgatgccttt aagcaaagcg acgtcgccgt tgatacgtac
     4141 ctgcaaccac aaatcagcca gcttcgtgcc gctgccaagc cacttccaaa cttcctgcgg
     4201 atgtttgaag cgcgtcatgc cggcttccgg cagcggatta atgtgcacaa tcctgcagcc
     4261 acgccgtttt gctgccagca aagtggacag catgcgcgga tgattcgtgc ccgggttttg
     4321 accgataacg aaaatcgcgt cgcaccgagt gaagtcttca agcgtcaccg tgcctttacc
     4381 gaaaccgagc gtctctttca ttcccgtgcc gctc
//
LOCUS       DATDBY010000250         3941 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1252667, whole genome shotgun sequence.
ACCESSION   DATDBY010000250 DATDBY010000000
VERSION     DATDBY010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3941
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1252667"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="VIT19_04685"
     CDS             <1..772
                     /locus_tag="VIT19_04685"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEY5838311.1"
                     /translation="GIGFALPSNEAKFVCDQILANGKVKRGYLGVTLDSVKGEFARVY
                     SLADARGAIVADIQAEQRDGEPTPAAKAGLRVNDIIVEFNGQPVQDAQDLIAKVAGTA
                     IGQTVSLTYLRDVDGKLERRSVSVALGERPDFSVRDETVTGKEKSESTKTSAARLGLT
                     LGELTPQLVTDKRLTGVNGLYIKEVDPNGLAADVRPNEVQIGEVITRINRLPVSTLAE
                     FQRVIDTLKPGDAIVFNLSRYDHRAKRVVQRIVQFTYE"
     gene            841..2394
                     /locus_tag="VIT19_04690"
     CDS             841..2394
                     /locus_tag="VIT19_04690"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY5838312.1"
                     /translation="MVQAKRALAKNARSNKSSSRTGANTYHNYINGQWVPSSSGEWSE
                     NRNPADTRDLIGRFPQSSQDDVDEAVAAARQAFDGWRRTPAPKRAELLFKLGEILVRD
                     KQQLTADMTREMGKVLKEAGGDVQEAIDCTYYTAGEGRRLHGFTTPAEMPNKFAMCVR
                     QPVGLCGLITPWNFPMAIPSWKLIPALVCGNTVVIKPAEDTPLSTYNLIKACEEAGLP
                     RGVVNLVMGDGSVVGSRLTDHPAVRLISFTGSTDTGRLVASACADRNAICSLEMGGKN
                     AIIVMDDADIDNAVEGAIWGAFGTSGQRCTASSRLIVHKKVYKQFSNKLVERAKKLRI
                     GNGADRAVDVGPVINQDAVEKIMNYIDVGRYEDGATLACGGRRLMKGDYAHGYFIEPT
                     VFTDVAPDMRIAQEEIFGPVTAVIPARSLDEAIEIANGVQYGLSAAIYTQDVNRAFHA
                     MNEMYTGIFYVNSSTIGAEVHLPFGGTKGTGNGHREAGTQVLDIFSEWKSVYVDYSGT
                     LQRAQIDNA"
     gene            2554..>3941
                     /gene="lepA"
                     /locus_tag="VIT19_04695"
     CDS             2554..>3941
                     /gene="lepA"
                     /locus_tag="VIT19_04695"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HEY5838313.1"
                     /translation="MNTENIRNFSIIAHIDHGKSTLADRLLELTGAVTGRAMEAQVLD
                     DMDLERERGITIKAHAVRLDYKARDGQNYLLNLIDTPGHVDFSYEVSRSLSACEGALL
                     IVDASQGVEAQTLANTYLAIENNLELIPVINKIDLPGAEPERALEEIRHFIGLETHNA
                     ILTSAKTGQGVAEVLEAIVRDVPSPKGDAGAPLKALIFDSWYDSYRGVIVLFRVIDGV
                     IRPGMKIRFMSAGRDYQVDTLGVNRPRPTPIGQLGVGEVGFLTASIKTVADVQIGDTI
                     TETARPTTEPFPGYQEIKPMVFAGLYPVDTNQYEELRDAMDKLRLNDASFFYEPESST
                     ALGFGFRCGFLGLLHMEIVQERLEREFDLDLITTAPGVRYVVTTTDGKVTEIDSPAKM
                     PDPGRLVKIEEPAIRATILTPEEHLGGILALLEEKRGQQKGFEYITSSRVMLTYELPL
                     NEIVLDFYDRLKS"
BASE COUNT          888 a         1064 c         1168 g          821 t
ORIGIN      
        1 cggcatcggc ttcgcgttgc cttcgaacga agcgaagttt gtctgcgatc agattctggc
       61 caacggcaag gtcaagcggg gctatctcgg cgtcacgctt gattcagtta agggcgagtt
      121 tgcgcgggtg tattcattgg cggacgcgcg cggcgcgatt gtggccgaca ttcaggctga
      181 acaacgcgac ggcgaaccga caccggccgc gaaagccggt ctgcgggtca acgacatcat
      241 cgtcgagttc aacggtcaac ccgttcagga cgcgcaggat ttgatcgcga aggtagccgg
      301 cacggctatc ggacagacag ttagtctcac ttacctgcgc gacgtcgatg gcaagttaga
      361 gcggcgctca gtcagtgtcg ctttaggaga acgtccggat ttcagcgtcc gcgatgagac
      421 ggtgaccggc aaagaaaagt ctgagagtac taagacgtcg gcggctcggc tcggccttac
      481 tttgggcgag ctgacgccac agttagttac cgacaagcga ctgaccggcg tgaatggcct
      541 ctacatcaaa gaagtcgatc caaatgggct cgcggcggac gtgcgaccga acgaagtgca
      601 gatcggtgaa gtcatcacgc gcatcaatcg tcttcccgta agcacgcttg cggagtttca
      661 gcgcgtgatt gacaccctga agcccggcga cgcgatcgtc ttcaaccttt cgcgctacga
      721 tcaccgagcc aagcgcgtcg tgcagcgcat agttcagttt acttatgaat gaggtaattg
      781 actcattgac cattggttca ttgattcaat ggaacaatga atcaatggtt aaatgatcta
      841 atggttcaag caaaaagagc actcgcaaaa aacgccaggt ctaataaatc gtcctcgcgc
      901 acgggcgcga atacctatca caactacatc aacggccaat gggtgccgag cagcagcggt
      961 gagtggagtg aaaatcgcaa tcccgccgat acgcgcgatt tgatcggccg ttttccgcaa
     1021 tcgtctcagg acgacgttga cgaagcagtt gcggccgcgc gtcaggcgtt tgacggttgg
     1081 cgacgcacgc cggcgccgaa acgcgctgag cttcttttca agctcggcga aatcctggtg
     1141 cgcgacaaac aacagctcac cgctgacatg acccgcgaga tgggcaaggt tcttaaggaa
     1201 gcgggcggcg atgtgcaaga ggcgatcgat tgcacttact acaccgcggg cgaaggccgg
     1261 cgtctgcatg gcttcaccac gccggctgag atgccgaaca agttcgcgat gtgcgtgcgg
     1321 caaccggtgg gcctgtgcgg attgattacg ccgtggaatt ttccgatggc gattccgtcc
     1381 tggaagctaa tcccggcgct tgtgtgcggc aacaccgtcg ttatcaaacc ggccgaagac
     1441 acgccacttt caacttacaa cttaatcaaa gcatgtgagg aagccggcct gccccgcggg
     1501 gtggtgaacc ttgtcatggg cgacggctcg gtcgtcggct cgagactgac ggatcatccg
     1561 gcggtgcggc tgatttcctt caccggatcg acggatacgg gacggctggt ggcttcggca
     1621 tgcgccgatc gcaatgcgat ttgctcgctg gaaatgggcg gcaagaacgc catcatcgtg
     1681 atggacgatg ccgacatcga caacgccgtc gaaggcgcca tctggggggc cttcgggact
     1741 tcgggtcaac gctgcacggc gtcatcgcgg ctgatcgttc acaagaaggt ttacaaacag
     1801 ttcagcaaca aactggtcga acgcgctaag aaactgcgca tcggcaacgg cgctgaccga
     1861 gctgtcgatg tggggccggt gatcaatcag gacgccgtcg aaaagatcat gaactatatc
     1921 gacgtcggcc ggtacgaaga cggtgcgacg ctcgcttgtg gcggccgtcg tttgatgaaa
     1981 ggtgattacg cgcacggcta ttttatcgag ccgacggtct tcaccgacgt cgcaccagac
     2041 atgcggatcg cgcaggagga aatcttcggt cccgtcacgg cggtgattcc cgcgcggtcg
     2101 ctcgacgagg cgatcgaaat cgcgaacgga gtgcaatacg gattgtcagc cgcgatttac
     2161 actcaggatg tgaaccgcgc tttccatgcg atgaacgaga tgtacacggg cattttctac
     2221 gtcaactctt ccaccatcgg cgcggaagtt cacctgccat tcggcggcac aaaaggcacc
     2281 ggcaacggtc atcgcgaagc gggcacgcag gtactcgaca tcttctcgga atggaaatcg
     2341 gtgtacgtcg attacagcgg cacgctccag cgggcgcaga tcgataatgc gtgaagtcaa
     2401 tgggctaaga tgcctgccat gaaagatggc aagcccgttt ccgtttggat ggagctgtaa
     2461 tacaaccccc atgttcgctg atttcagata gcgaacctca ctgacgcgtt gcaaaatccc
     2521 gcccgttctc attaactaaa gcaactaact cgaatgaata ctgagaacat ccggaatttt
     2581 tctatcatcg cgcacatcga tcacggcaaa tcgactctgg ccgatcgtct gttggaattg
     2641 accggagcgg tgactggccg cgcgatggaa gcacaagtgc tcgacgacat ggatctggag
     2701 cgcgagcgtg ggataactat taaggcacac gcggtgcgtc tggactacaa agcgcgcgat
     2761 ggacagaact acctgctgaa tttgatcgat actcccggtc acgtcgattt ttcttacgaa
     2821 gtctcgcgtt cgttatccgc ctgcgaaggc gcgttgctaa tcgtcgatgc ttcgcaggga
     2881 gtcgaggcgc agacgctcgc caatacttat ctggcaatcg aaaataatct cgagttgatc
     2941 ccggtcatca acaagatcga cctgcccggg gccgagcctg agcgagcgct cgaagagatt
     3001 aggcacttca ttggcctcga aactcacaac gcgattctta ccagcgccaa aaccggccag
     3061 ggtgtcgccg aggttttgga agcaattgtg cgggatgtgc cgtcgccgaa gggtgatgcg
     3121 ggcgcgcctt tgaaggccct gatttttgat tcatggtacg actcgtatcg cggcgtgatt
     3181 gttttgttcc gcgtgattga cggtgtcatt cgtccgggca tgaagattcg cttcatgagc
     3241 gcgggtcgcg actatcaggt ggacacgctg ggagtgaatc gcccgcgacc gacgcccatc
     3301 ggtcagcttg gcgtcggcga agttggcttc ctgacggctt caataaagac agtcgccgac
     3361 gtgcaaatcg gtgacacgat taccgaaact gcgcgaccca cgaccgaacc ttttcccggg
     3421 tatcaggaaa tcaagcccat ggtttttgcg ggactctatc ccgtggatac aaaccagtac
     3481 gaagagctgc gcgacgcgat ggataagctg cgtttgaatg acgcgtcgtt cttttacgaa
     3541 cctgagtctt caactgcgct tggtttcggt tttcgctgtg gctttctcgg attgctgcac
     3601 atggagatcg tgcaggagcg tctggaacgc gaattcgatc tcgatctgat caccacggcg
     3661 ccgggcgtgc gctatgtggt gactacgact gacggcaagg tcacggaaat cgattcaccg
     3721 gccaagatgc ctgatccggg ccggctggtg aagattgaag agccggccat ccgcgcgacg
     3781 attctgactc cggaagaaca cctgggcgga attctcgcgc tgctcgaaga aaagcgcggc
     3841 cagcagaaag gctttgagta catcacttca agtcgagtga tgctgaccta cgaactaccg
     3901 ctgaacgaga tcgtgctcga tttttatgat cgcttgaagt c
//
LOCUS       DATDBY010000251         3723 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_422375, whole genome shotgun sequence.
ACCESSION   DATDBY010000251 DATDBY010000000
VERSION     DATDBY010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3723
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422375"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="VIT19_04700"
     CDS             <1..271
                     /locus_tag="VIT19_04700"
                     /inference="COORDINATES: protein motif:HMM:NF015419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838314.1"
                     /translation="LRAMQGATEKTLPAVTAVLARNVKASPDRDSYLPAVLRTDEDGR
                     LLAEPLKWGGSSDFVSFARANGLILVPAGASITPGDIAKCLRLPG"
     gene            359..1222
                     /locus_tag="VIT19_04705"
     CDS             359..1222
                     /locus_tag="VIT19_04705"
                     /inference="COORDINATES: protein motif:HMM:NF021998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase CarF family protein"
                     /protein_id="HEY5838315.1"
                     /translation="MNERPLTAHTIRARESISQSSQPLISTTATVLPAGEGYSGIEEK
                     SGTLHSILEHVMTYAFPLLCAANLYLAARELGWLSLAVVIIVGAPFAWVLADFVSGLI
                     HWFADTYGADDTPLFGPWLIKPFRQHHQYARDICTHNLVLTIGNSCTLAAPLQAGLFY
                     LLLSDEDVSITKAALAFVVNLFTIAMVATNVLHKWAHAEKTNWLISRLQRSRVFLSPA
                     HHHLHHTKPFDSNYCITNGWLNPLLERIRFFRSLEATLSVIGIKPNEESCAGASLSRN
                     LAPVKTELGEG"
     gene            1223..1696
                     /gene="moaC"
                     /locus_tag="VIT19_04710"
     CDS             1223..1696
                     /gene="moaC"
                     /locus_tag="VIT19_04710"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001612668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEY5838316.1"
                     /translation="MAQLTHLDDEGRARMVDTSEKPNTARRAVASAVVRMSAQTVAAV
                     RNHQTPKGDPLETARLAGVMAGKRTAELIPLCHSLPLTHIDVRAETKDDGVYLEAEVS
                     THARTGVEMEALTAVSVAALTVYDMCKALDKSMTITDVRLELKTGGKSGDYRRES"
     gene            1737..2537
                     /locus_tag="VIT19_04715"
     CDS             1737..2537
                     /locus_tag="VIT19_04715"
                     /inference="COORDINATES: protein motif:HMM:NF024790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HEY5838317.1"
                     /translation="MKYRLADDARPQAKMLMLAAVISVALWFIPFAEILIYPFRIFVT
                     FIHEGGHAIAALLTGNSVQSLSVSMSGSGEVYSTQGGTFSQMFVSSAGYLGAMAFGAV
                     LLVLIRRAAAARVILFACAFLILFLTFVFGFLTPIFAGPGASWAGVPFTFIAGVVISL
                     GLYAIGRWTGERVALFIVSMIAVQCILNALLDLKTVFFLSSPFAPVVPNDAVNMANAT
                     GVPAMFWAVLWIAVAFGILLLALRLYVSARDRAFDKQQDLPFESKVEI"
     gene            2631..2984
                     /locus_tag="VIT19_04720"
     CDS             2631..2984
                     /locus_tag="VIT19_04720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838318.1"
                     /translation="MHVLRKAFFLSIILAAALALTACPSKITISQITADPGKYQNKEV
                     GLIGTVTDSYGVLGNGVYELDDGTGRIWVMTTRGVPARGSRVGVSGRAYTGLQFGGRN
                     YGLGLKEEKRQTKSP"
     gene            3012..3473
                     /locus_tag="VIT19_04725"
     CDS             3012..3473
                     /locus_tag="VIT19_04725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838319.1"
                     /translation="MTTQGSMKKSIDRLDAQFADLHARSVDLIARLSRERLYAKPDGS
                     ADSFGEQILRSAAVVEQSFGGLTANLWDDPFEWTLPETLNAPTKVLEYLDEVEATRRH
                     AFDSFESDDDLSKEIMTPAGRAQLLPFLLDTLRRARHHHQRAVTIYELQNK"
BASE COUNT          731 a         1053 c         1068 g          871 t
ORIGIN      
        1 gcttcgagcg atgcaggggg caacggagaa aacgttgccg gcagtcacag ccgtcctggc
       61 gcgaaacgtg aaggcttcgc cggatcgcga cagctacctg ccggccgtct tgcggactga
      121 cgaagacgga agactgctgg cggaaccgct gaaatggggc ggctcgtccg attttgtttc
      181 gtttgcccgc gcaaatggcc tgattcttgt tcccgccggc gcctcaataa cccccggcga
      241 catcgcgaaa tgccttcgcc tgcctggttg actaccttcg agggcgaatt acggatatta
      301 ttcgacccgt tttactcgat cccctgggct tagccctgct gtctgatttg gaggtttctt
      361 gaacgagcgt cccttgacgg cgcacacgat ccgagcgcgc gaatcgattt ctcaatcatc
      421 tcagcccttg atctcgacaa cggccacagt gctgccggcg ggagagggtt acagcgggat
      481 tgaagagaag tcgggcacgc tgcactcgat ccttgagcac gtgatgactt acgcgtttcc
      541 gttgctctgc gcggctaact tgtatttggc tgcccgcgaa cttgggtggt tgagtttagc
      601 cgttgtgata atcgttggcg cacctttcgc ctgggtcctc gctgatttcg tctcaggtct
      661 aatccactgg tttgccgaca cgtacggcgc ggacgatacg ccgctgtttg gcccatggtt
      721 gatcaagccg ttccgccaac accaccagta cgcccgagac atctgcacgc acaatcttgt
      781 gctgacgatt ggcaactcat gcacgcttgc ggcgccgtta caggccgggc tgttttacct
      841 tttgcttagt gacgaagacg tatcgatcac aaaggccgcg ctggcgttcg tcgtaaacct
      901 gttcacgata gcaatggtcg cgacaaacgt tttgcacaag tgggcgcatg ccgaaaaaac
      961 gaattggctg atttcgcgtc tccagcgttc aagagtgttc ctgagcccgg cgcatcacca
     1021 tcttcatcat acgaaaccgt tcgattcgaa ctactgcatc acgaatggtt ggctgaatcc
     1081 gttactcgaa cgcattcggt ttttccgtag cctcgaagcg accctttccg ttattggaat
     1141 caaacccaat gaggagagct gcgccggcgc ttccctgtct cgaaatctcg cgcccgtgaa
     1201 aacagagttg ggagagggtt agttggcgca actcacgcac ctggatgacg agggccgcgc
     1261 gcgtatggtg gacacctcgg agaaaccgaa caccgcgcgg cgcgccgttg cgtcagcggt
     1321 tgtgaggatg tccgcgcaaa ctgtcgcggc cgttcgcaat catcaaacgc cgaaaggtga
     1381 tccgctggag acggcccggc tcgccggcgt gatggccggg aagagaactg cggaactgat
     1441 tccgctttgc cattccctgc cactgacgca catcgatgtt cgcgccgaga cgaaagacga
     1501 cggtgtctat ctcgaagccg aagtctcgac gcatgcccgg accggcgtcg aaatggaagc
     1561 tcttaccgca gtttcagtcg ccgcgctgac cgtctatgac atgtgcaagg ccctggataa
     1621 atcgatgacg attacggacg tgcggttgga gctgaaaacg ggcggcaaat ccggcgatta
     1681 tcggcgcgaa agttgacgag ggaacaagcc aacgcgattt agcgttcatt caagggatga
     1741 aataccgact tgctgatgat gctcgaccgc aggcgaagat gcttatgctc gccgcggtta
     1801 tctccgtcgc cctctggttc attccgtttg cggaaatcct catttatccg tttcgcatct
     1861 tcgtcacttt catacatgaa ggcggacacg ccatcgctgc tctgttaacg ggcaattcgg
     1921 tgcagagcct cagcgtttcc atgagcggca gcggcgaggt ctactcaacg cagggcggta
     1981 cgttctcgca gatgtttgtc tcaagcgcgg gctacctcgg cgcgatggcg ttcggggcgg
     2041 tactgctcgt tttaattcgg cgggcggctg cggcgcgcgt catccttttt gcctgcgcgt
     2101 tcctgattct gtttctgacc ttcgtgtttg gttttcttac gccgatcttt gccggccccg
     2161 gcgcgtcctg ggcgggtgtc ccatttacgt ttatcgccgg cgtggtgatt tcgctcggcc
     2221 tttacgccat cggccgatgg acaggggaac gcgttgccct cttcatcgtc agcatgatcg
     2281 cggtgcaatg cattctgaat gctctgctcg atttgaagac cgtcttcttc ctttcgtcgc
     2341 cctttgcccc cgttgttccc aatgacgccg tgaacatggc gaacgcgacg ggcgtgccgg
     2401 cgatgttctg ggccgtgtta tggatcgctg tggcgttcgg aattctgttg ctggccttgc
     2461 ggctttacgt ctcagcgcgc gaccgcgcct tcgacaagca gcaggatttg ccgttcgaaa
     2521 gcaaggttga aatctagcca gtcacgcgac gtgttttttt cgcgcgcgca agccagtgat
     2581 atcatcgctt tgctctcctc gaagtgcttc tgaaactgaa aggagatgca atgcacgttc
     2641 ttcgtaaagc cttctttctc tccataattc tcgccgctgc gctggcgttg acagcttgtc
     2701 ccagcaagat aacgatttcg caaatcactg ccgatcccgg caaataccag aacaaggaag
     2761 tcggtctgat cggaaccgtc accgacagct acggagtgct tggcaacggc gtctatgagc
     2821 tggacgacgg caccggccgt atctgggtaa tgaccacacg cggcgttcca gcgcgcggca
     2881 gtcgcgttgg cgtttccggc cgcgcgtaca cgggattaca attcggcggc cgcaactacg
     2941 gtctcggtct caaagaagaa aagcggcaaa cgaagtcgcc gtgaagaaat tgattcggat
     3001 tcattgaatc aatgacgacg caaggttcga tgaagaaatc aatcgacagg ctcgatgcgc
     3061 agttcgcgga ccttcacgcg cggtcggttg atttgatcgc gcgtctttcc cgcgaacgtc
     3121 tctacgcgaa gccggacggt tctgctgatt cgttcgggga acagatcctg cggagcgccg
     3181 cagtggtcga gcagagcttc ggtggcctca ccgctaatct ctgggacgat ccgtttgagt
     3241 ggacgctgcc agagacgctg aatgctccga ctaaggtgct ggaatatctg gatgaggttg
     3301 aggctacgcg ccgccacgca tttgattctt ttgaaagcga cgacgatctt tctaaagaga
     3361 tcatgacgcc tgccgggcgc gctcaacttt taccttttct actggacact ttgcggcgcg
     3421 caaggcatca tcaccagcga gctgtgacga tctacgaatt gcagaacaaa taagaccgaa
     3481 actctcctta tgttttgtcc cagatgcggc caacaacagg caaccgattc catgcgcttc
     3541 tgctctcgat gtggattctc gatggaaggc gtcatgcatc tgctgggaca cggcggcatg
     3601 ctgccgcgct atccaactga tcccggggac acgacagttt cgccgcgccg caaaggcgtc
     3661 aagcaaggcg taattctgat gttgctgggc gtcctgttcg ttccgatttt tggagtgatg
     3721 gcc
//
LOCUS       DATDBY010000252         2201 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2046223, whole genome shotgun sequence.
ACCESSION   DATDBY010000252 DATDBY010000000
VERSION     DATDBY010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2046223"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1084
                     /locus_tag="VIT19_04730"
     CDS             <1..1084
                     /locus_tag="VIT19_04730"
                     /inference="COORDINATES: protein motif:HMM:NF014680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEY5838320.1"
                     /translation="TLEKFQATAKGDLDQRQQAIDQLVKPLKESLEKVDGKIGEIEKA
                     RAGAYAELREQVRGLATSQLQLQAETGNLVKALRTPHIRGRWGEIQLRRVVELAGMVQ
                     YCDFNEQANVTTEDGRIRPDVIVRLPGNRCIVVDAKVPFEAFYQSISATDDGIRVECL
                     KEHARLVRTHIGHLSRKSYWESVQPTPEFVLLFLPGENFYSAALEQDPKLIEDGINQR
                     VIIATPTTLIALLKAISYGWQQEQRAANADEVGKLGKELYDRLRTFVNYFADIGRNLD
                     RALESYNKGVGSLEARVMVTARKFKERGAIAGEEIEIIDSVDKTSRVLTLDEGGLFPE
                     LVAPEEEIPDEPTPSLPFSKSATGTG"
     gene            1114..>2201
                     /locus_tag="VIT19_04735"
     CDS             1114..>2201
                     /locus_tag="VIT19_04735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838321.1"
                     /translation="MSKEIWLGPVLGTNRERLLARCAEYVATGETDRLLYLAASHPLL
                     DLATQTVLDGKNAHGVWGEFPFYLFRGFVRRVLAGAVVSEPRAVATGSGKRFAEYSTP
                     SVDPAASTTPRGLPARGPRSARGSDTVGLDPRVPIDREELPLRHSLISQIIKQLADAG
                     QLPAIKRLANRDGCINTIATLIGELQRAGKTPEEFTAIVETRAADFAVQSPTSKAQRP
                     GSQVDFDRDIALIYSKYEEALKRFGLTDADADQLTALHILRGDVPQVDNLRSGNDAQV
                     NTEGYTLPWLDSIDLLVLDGFFDFTPVQGEMLRLLIQRIPNVIVNINYDDRNPQIFQT
                     FQSTIEQLKSIADFEVIADGDNVEIRSGL"
BASE COUNT          511 a          623 c          642 g          425 t
ORIGIN      
        1 aacgctggaa aagtttcagg cgacggcgaa aggcgatttg gatcagcggc aacaggcgat
       61 cgatcaactg gtcaagccgc tgaaagagtc gctcgaaaaa gtggacggga agattggcga
      121 gatcgaaaaa gcccgggccg gtgcctatgc tgagttgcgc gaacaggtgc gcggcctggc
      181 cacttcgcag ttgcagctcc aggcggaaac cggaaattta gtgaaggcct tgcgcactcc
      241 ccacatccgc ggccgctggg gcgagattca actgcgacgt gtcgtcgaac tagccggcat
      301 ggtccagtac tgcgacttca atgaacaggc aaacgtgacc acagaagacg ggcgcattag
      361 accggatgtc attgtgcgtc tgccgggcaa ccgatgcatc gtggtggacg caaaggtgcc
      421 gttcgaagcg ttctatcaat cgatctcagc caccgacgat ggaattcgcg ttgaatgctt
      481 aaaggagcat gcgcgcctgg tgcggacgca catcggccac ctcagccgga aatcgtattg
      541 ggaaagcgtg cagccaacgc cggagtttgt cttgctcttc ctgcccggcg aaaattttta
      601 cagcgccgca ctcgaacagg atccgaaact aattgaagat ggaatcaatc agcgggtgat
      661 catcgccact ccgacgacat tgatcgcgct tttgaaagca atctcttacg gttggcaaca
      721 ggagcagcgg gccgccaatg cggacgaagt cgggaagctc ggcaaggagc tttacgaccg
      781 gctgcggacc ttcgtcaact acttcgcaga catcggccgc aatctcgatc gcgcgcttga
      841 gtcatacaac aaaggcgtgg gctcgcttga agcgcgtgtg atggtgactg cgcgcaagtt
      901 caaagaacgc ggcgccattg ccggtgaaga aattgagatt atcgactctg tcgataaaac
      961 aagtcgcgtc ctgacgctgg acgagggcgg actatttcct gaattggttg cgcccgaaga
     1021 ggaaatccca gacgaaccca cgccgtctct gcccttttca aagagcgcaa ctgggacagg
     1081 ataattcaac gggccggctc tgcggacaac ctcatgtcaa aagaaatttg gttagggccg
     1141 gttctcggga cgaatcgcga acgactgctc gcgcgttgtg ctgagtacgt cgcgacaggc
     1201 gaaactgatc ggctgcttta cctcgcggcc tcacatccgc tgctggacct tgcgacccag
     1261 acagtcttag acggaaagaa cgctcacggc gtctggggcg agttcccgtt ttatctgttt
     1321 cgtggattcg tgcggcgcgt gctggccggc gctgtggtgt cagaaccgcg agcggtagcg
     1381 accggatcag gaaagcgctt cgccgaatat tcaacgccct cggttgatcc ggccgcatcc
     1441 accaccccac gcgggctgcc cgcgcgggga ccccggtccg ctcgcggttc tgacacggtc
     1501 gggctcgatc cccgggttcc gatcgatcgc gaagaactgc cgctgcgcca cagcctgatc
     1561 tcccaaatca tcaagcagct tgcggacgcc ggacaactgc cggcgatcaa gcgtctggcg
     1621 aatcgtgacg ggtgcatcaa cacaatcgcg acactgattg gagagctgca acgggcagga
     1681 aaaacgccag aggaattcac ggccattgtt gagacaagag ccgccgactt tgccgtccaa
     1741 agtccaacgt ccaaggccca acgtccagga agtcaggtgg actttgatcg cgacatcgcg
     1801 ctgatttact ccaaatacga ggaagcgctc aaacgtttcg ggctcaccga tgcggacgcc
     1861 gatcaactta ccgcattaca catcctccgc ggagatgtac cgcaagttga taacttacgt
     1921 tcaggaaacg acgcgcaggt taacaccgag ggctacacgc tgccgtggct cgacagtatt
     1981 gatctgctgg tgctcgacgg cttctttgat ttcaccccgg tgcagggcga gatgctgcgg
     2041 ctactcatcc agcggattcc caacgtgatc gtcaatatca actacgacga tcggaacccg
     2101 caaatctttc agacgtttca atcgacgatt gagcaactga agtccattgc tgacttcgaa
     2161 gtgattgcgg atggcgacaa cgtcgaaatc cgcagtggcc t
//
LOCUS       DATDBY010000253         2662 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1244802, whole genome shotgun sequence.
ACCESSION   DATDBY010000253 DATDBY010000000
VERSION     DATDBY010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1244802"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..741
                     /locus_tag="VIT19_04740"
     CDS             <1..741
                     /locus_tag="VIT19_04740"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase family protein"
                     /protein_id="HEY5838322.1"
                     /translation="AEAPPLIREALFSDARNLWSESGIDLGSEGILKDAGDISPPSPR
                     QIEDAVSSLLAQGLRPLALGGDHSITFPIVTAIAREYSSLTILHFDAHPDLYHDFRGN
                     PFSHASPFARIMEAKLAQRLVQVGIRTMNAHQRQQAERFGVEVIEMKDFKDDLGLRFD
                     TPVYVSVDLDALDPAFAPGVVHREPGGLTTRQVIQTIQSIEAPVIGADIVEFNPELDP
                     TGMTAVVCAKILKELAAKMLTLEPVPSS"
     gene            767..1792
                     /locus_tag="VIT19_04745"
     CDS             767..1792
                     /locus_tag="VIT19_04745"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid dehydrogenase"
                     /protein_id="HEY5838323.1"
                     /translation="MKITDLQIPDYERVASCVEGDYRGFVAIHSTKLGPAVGGTRFWK
                     YENDEAAIKDLLRLARGMTYKNALAGLPLGGGKSIMLRPDRVNDREKLFRAHGRFVET
                     FGGRYITAEDVGTNPDDIAIVRQETEHAAGLHGLSGDPSPFTARGVFRAMQAAATHRW
                     GSESLVRKTVALQGCGNVGYHLASLLHADDVRLIVSDVDPIKVERLVKEFDAAAVAPE
                     EIYSVESDVYAPCALGGTINDETIAQIKAEIITGGANNQLLEERHGDELEKRGILYSP
                     DYAANAGGIINGCRELLGWEASESLAKVDEIYETVLDIFRTSEADGIPTYKAADRLAE
                     RRLNENN"
     gene            1848..2333
                     /locus_tag="VIT19_04750"
     CDS             1848..2333
                     /locus_tag="VIT19_04750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838324.1"
                     /translation="MLGFATIFSALSDRCLLLLGVILGLTDWLPDLTWRNVGLGVLVV
                     VVTFVVATGVVSFVVVKLPATYFHPDHDREILKDKHPAIRWAGIIGKNLAGVVLVVLG
                     VVMSMPGIPGPGLVTILFGVMLVDFPGRRWLEHKIVSRPAVQTTINNLRKRFGKKPMK
                     L"
BASE COUNT          590 a          720 c          752 g          600 t
ORIGIN      
        1 gccgaagcgc cgcccttgat ccgcgaagct ctgttttccg atgcgcgcaa cctgtggagc
       61 gaaagtggaa ttgatcttgg cagcgaagga atcttgaaag acgccggcga tatctctcct
      121 ccttccccgc gacagatcga agacgcagtc agttcgctgc ttgcccaggg ccttcgtccc
      181 ctggcattgg gcggcgatca ctcgatcact ttcccgattg tcactgctat cgcgcgggag
      241 tattcatcgc ttaccatcct gcatttcgac gcgcatcccg atctttatca cgacttccgc
      301 ggcaatcctt tctcgcatgc cagcccgttc gcgcgcatca tggaagcgaa attggcacag
      361 cggctggtgc aggttgggat tcgtacgatg aacgcacatc aacgccaaca ggctgagaga
      421 ttcggcgtgg aagtgatcga gatgaaagac tttaaggatg acctgggact gagattcgac
      481 accccggttt atgtttcagt tgacctggat gcgctcgatc cggcatttgc tccgggcgtg
      541 gtgcatcggg aaccgggcgg tctgacaacg cggcaggtta tccaaacaat tcagtcaatc
      601 gaagccccag tcatcggcgc cgatattgtc gaattcaatc ctgagctgga tccgacggga
      661 atgaccgcgg tcgtgtgcgc taagatcttg aaggagttgg cggcaaaaat gctgactttg
      721 gaaccagttc ccagttcata gcgtatcgtt aggtttggcg aacatcgtga agattaccga
      781 ccttcaaatc cccgattatg agcgcgtcgc gtcgtgcgtt gaaggcgact atcgcggctt
      841 cgtggcgatt cacagcacca aactcggacc cgctgtcggc ggcacgcggt tttggaagta
      901 cgagaacgac gaagccgcga tcaaagactt gctgcggtta gcgcggggca tgacttacaa
      961 gaacgctttg gcgggactgc cgctgggagg tggcaaatcg atcatgctgc gtcctgaccg
     1021 ggtgaatgat cgggaaaaac tctttcgcgc ccacggacgt ttcgtagaga cgttcggcgg
     1081 acgttacatc accgcggaag acgtcggcac aaatcctgac gacatagcca ttgtccgaca
     1141 agagacagag cacgcggccg gcctgcacgg tttgtcgggt gacccatcgc cgttcactgc
     1201 gcgcggcgtg tttcgcgcga tgcaggcagc agcgacacat cgttggggtt ctgaatcgtt
     1261 agtgagaaaa accgttgcgc tccagggttg tggcaacgtt ggctatcacc tggcatcgtt
     1321 gcttcacgcg gacgatgtgc gcttgattgt ttctgacgtc gatccgatca aagtcgagcg
     1381 tctggtgaaa gagtttgacg cagcagccgt cgcgccggaa gaaatttact ctgttgaatc
     1441 ggacgtctat gcgccatgcg cgctcggcgg caccatcaac gacgaaacga tcgcgcaaat
     1501 caaagctgaa ataatcacgg gcggagcgaa caatcagctt ttggaagagc gtcacggtga
     1561 cgagcttgaa aagcgtggaa ttctgtattc gccggactac gccgcgaacg ccggtggaat
     1621 tatcaacggc tgccgcgagc tgctcggttg ggaagcatca gaatcgctcg cgaaagtcga
     1681 tgagatttac gaaacggtcc tcgacatctt ccgcacctct gaagccgacg gaattcctac
     1741 ctacaaggcg gcggaccgtt tggcggaacg gcgactgaac gaaaacaatt agtcaatcaa
     1801 actcctgcgc ttattcctac ttcaccacga cggtacactg aagacacatg cttggattcg
     1861 cgacaatctt ctcagctctc agcgaccgat gcctgctatt actcggggtc attcttgggc
     1921 taacggactg gctgccggac ttgacctggc ggaacgttgg ccttggagtg ctggtggtcg
     1981 tggtcacatt tgtcgtggcc accggcgttg tttcctttgt agtggtgaag ttgccggcca
     2041 cgtattttca tcccgatcat gaccgggaaa ttctgaaaga caaacacccg gcgatccgct
     2101 gggcgggaat catcggtaag aacctggctg gagtagttct agttgtgctc ggcgtggtga
     2161 tgtccatgcc gggcattccc ggcccggggc tggtaactat cttattcggc gtgatgctgg
     2221 ttgattttcc cggcaggcgt tggctagagc acaaaatcgt aagtcgaccg gcagtccaaa
     2281 cgacgattaa taacctgcgt aaaagattcg gcaaaaaacc gatgaaactg taagggtaag
     2341 atagtcaaga aatcgatcca cagattacgc agattccaca gacaggaaaa cgaatcgttt
     2401 agacgccgga cttgtccggc cctcgtccgc acaagtgcgg actctaaacg atgttgtgtt
     2461 ttcttcgttc ggcgtaatcc gggtaatctg cggattattc tgaaccacta cttcccaaac
     2521 cgcgacccgc tcaacgtcgc atctgccctt gcccaggctt tcttgaagcg cgcttcggct
     2581 aacgcagcgt catcattttt atgctgcgct ttcaaagcct gcatcaggcc gtacagcgcc
     2641 cagccatttt cacggttgcg ct
//
LOCUS       DATDBY010000254         2041 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_656317, whole genome shotgun sequence.
ACCESSION   DATDBY010000254 DATDBY010000000
VERSION     DATDBY010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656317"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1650
                     /locus_tag="VIT19_04755"
     CDS             <1..1650
                     /locus_tag="VIT19_04755"
                     /inference="COORDINATES: protein motif:HMM:NF013125.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007154 - cell communication [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Calx-beta domain-containing protein"
                     /protein_id="HEY5838325.1"
                     /translation="MLPTSNSFTSGQSQSTFTSNSSSTGQACATVDNQQTCVTINITL
                     PSFSISDATPQFEGNSGTTSFSFTVTKTGPGAASVNFQTQNGSATIANNDYQTNSGSL
                     SFASSDTTKTISVLVNGDTAAEIDETFNVLLQSPTDASIADGTGVGTILNDDESATAG
                     QLIISEFRLSGPGANPAEQANNEFIELYNATDQDVLVTTTDGSAGWAVATSSGAPIFF
                     VPNGTTIPARGHFLGTNTSGYSLNTYPAGDGTFATGDATWTTDVPDNTALAVFRTNNA
                     ANFNATNRLDSVGPNTETNTLYREGAGYAPLAPADLAQNLEHTFFRQICVFQAGCPTP
                     GRPRDTQDNAADFIFADTIGATTSAGQRLGSPGPENLASPIKRDPAVNLVFLDATVSD
                     ASAPNRDRNTTSDGANASLFGTMTIRRRVVNQTGGTVTRLRFRVIDMTTHPSGTFADL
                     RLRSSLDQGIGGINDPNTCASTGTPSSPSCTVTVKGLTVEQPPNVPAANGGGLNTTVT
                     LDLSTLPGGALAPNQSVNVQFLLGVQKTGQFKFYLVVEALP"
     gene            complement(1829..>2041)
                     /locus_tag="VIT19_04760"
     CDS             complement(1829..>2041)
                     /locus_tag="VIT19_04760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838326.1"
                     /translation="VQRGGSPTPFDRILATRFGIKAYEMIQAGEFGRMAALRGNKIES
                     ASLDEAIGELKRLDEEIYRIAEMFFG"
BASE COUNT          469 a          625 c          559 g          388 t
ORIGIN      
        1 atgttgccca ccagcaactc gttcacctcc ggtcagtctc agtcgacgtt tacttctaat
       61 tcgtccagca cgggtcaagc ctgcgcgacg gtggacaatc agcagacctg cgtcacgatt
      121 aacatcactc tgccttcgtt cagcattagt gacgcgacgc cgcagtttga agggaactcc
      181 ggcactacga gcttcagctt caccgtgaca aagaccggac cgggcgcggc ctcagtgaat
      241 ttccagacgc agaatggctc agccaccatc gcgaacaatg actatcaaac gaattcgggt
      301 tcgctgagct ttgcttccag cgatacgacg aagacaatct cggtcctggt taacggcgat
      361 acggcagccg agattgacga gactttcaat gttctcctgc agagcccgac tgatgcctcg
      421 atcgctgacg gcaccggagt cggaaccatc cttaacgatg acgaatcagc cacggccggc
      481 caactgatca tcagcgagtt ccgtttgagc ggaccgggcg ccaacccagc cgaacaggcg
      541 aacaacgaat tcatcgaact ctacaatgcc acggatcagg atgtgttggt gacgaccact
      601 gatggctctg cgggatgggc cgtagcgacc tcgagcggcg ccccgatctt ctttgtcccg
      661 aacggtacga cgattccggc ccgcggacat ttcctgggca cgaatacaag cggctattcg
      721 ctgaatacct atccagccgg agacggcacc ttcgcgaccg gcgacgccac ctggacgacg
      781 gatgttccgg acaacaccgc ccttgccgta ttccggacaa ataatgcggc gaacttcaat
      841 gcgaccaatc gcctcgattc ggttgggccg aacactgaaa cgaacacgct gtaccgcgaa
      901 ggcgcaggtt acgcgccgct ggctccggcg gatctcgctc agaatctcga acacaccttc
      961 ttccgccaga tatgcgtgtt ccaggcgggt tgcccgacgc cgggacggcc gcgcgatacg
     1021 caagacaatg cggcggactt tatcttcgct gacacgatcg gcgcgacgac gtcagccggg
     1081 caacgtttgg gcagcccggg cccggagaac ctcgcatcgc caatcaagcg cgacccagcg
     1141 gtgaatctgg tgttcctcga cgctacggtc tcggacgcca gcgcgccaaa ccgcgatcgg
     1201 aatacaactt ccgacggtgc caacgcgtcg ctgttcggca ccatgacgat tcgccggcgg
     1261 gtggtaaatc aaaccggcgg caccgttacc cggcttaggt tccgcgtgat cgacatgacc
     1321 acgcacccgt caggcacatt cgccgacctg cgtctccgat catcattgga tcaaggaatt
     1381 ggcggcatta acgacccgaa tacctgcgcg tcaacgggga cgcctagttc gccgtcatgc
     1441 acggtgaccg tcaaaggatt gacggttgag cagccaccaa atgtaccggc cgccaacggt
     1501 ggtggcctga atacgacggt cacgctcgat ctgtcgacct tgcctggcgg cgcattggcg
     1561 cccaaccaga gcgtcaacgt tcagttcctg ttaggagtcc agaagacggg acagttcaag
     1621 ttctacctgg tggttgaggc gctgccgtaa gaaagcagtg ggcagtaggc agtgagcagt
     1681 agaaggccgc gtgaagattc gctcctcacg cggccagttt ttatcgattc ggcagttaag
     1741 aagttagcta ggacctcgaa cagtcttaac caaagaacag aacagtctag ccaaagaaca
     1801 gaacagccta gccaaagaac agaacagcct agccaaagaa catctcggcg attcgataaa
     1861 tctcttcgtc cagccgctta agttctccga tggcttcatc cagtgaagct gactcaatct
     1921 tgtttccgcg caaggcagcc atccggccga attcaccggc ctgaatcatt tcataggctt
     1981 taattccgaa ccgcgtggcc aggatccgat cgaatggtgt cggggaacct ccgcgctgca
     2041 c
//
LOCUS       DATDBY010000255         8623 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1894536, whole genome shotgun sequence.
ACCESSION   DATDBY010000255 DATDBY010000000
VERSION     DATDBY010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8623
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1894536"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..426)
                     /locus_tag="VIT19_04765"
     CDS             complement(<1..426)
                     /locus_tag="VIT19_04765"
                     /inference="COORDINATES: protein motif:HMM:NF013514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838327.1"
                     /translation="MATLEEILAKSIPELKQRYVDRARPVPKGLIEALECDSRNGAHH
                     VAKQIRERWRKNRAEGQRLHNLLRFEIDLWEQGFNFIAGVDEAGMAPLAGPVIAGAVI
                     LPKNYKLRRLNDSKQILDESVRAELAEQIKQDAIVWSVGR"
     gene            complement(678..2372)
                     /locus_tag="VIT19_04770"
     CDS             complement(678..2372)
                     /locus_tag="VIT19_04770"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY5838328.1"
                     /translation="MSPAQPIVTAGLRPDLFSQVGTRSLSRLLLAAMLCMFVLAGLGF
                     RTAGLSKEALSEDELNKLNAVTEYRAKGLTAANSEHPLLMKAALTVSVIACERWNALV
                     ASNPALNIPVETALRIPGAILGALSAALIFLIAMELFGLEVGLISAALWSFDPLTISF
                     NRIAKEDTFVVFFFLLMNVFWLRGQRVAESQPHRNPDRFYWAAAASFGAMMASKYVPQ
                     LFAIPVAYYYVFQGMTATRWRLGKKKWLKFFLVMGVAFLIFNPTIVLPDTWRTIAKFA
                     GSKMMGHDSYEFMGLLYPHRAFDWLRGEPWYFYFVLLGVKLPIAALIAFAGGVVLLFR
                     RATGDGRYFLLFWLFFWGLTFTFTGGKFTRYATSLMPAVIITAAIAIQFAGRQFGKVI
                     RGISDQAAIPVYARAALVSLIIISTMWSAASATPHYRLYMNSLAGGALAGAYFPQDEF
                     YDAYMFDAMKEIAARARPGARVGTEIPTLADYYAKRAGRTDLSCTEFSPPADLEKFSD
                     GDFLIDAGGRVYYSNQAMLQRLRQTSEPAFTISVGDIPAADVYVLDTVALKALRGE"
     gene            2802..5891
                     /locus_tag="VIT19_04775"
     CDS             2802..5891
                     /locus_tag="VIT19_04775"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HEY5838329.1"
                     /translation="MKTAYRFEKNGTGQHELIVRVKVQSEAALNHFGQLVLPYVSANE
                     NLDFPYIRVRKANGTTVTASATDVQDLTAPISREAPVYTDVRQKHVTVPGLRPGDTLE
                     YHAVWKMHTPLAANHFWLSHDFVTRDVIVLDEQLEVNVPAETAVKLKAEKGFDPAVKE
                     LDGRRIYVWKHSVLKRVEEQDDDKEAARRRREELEDPKPAMVQLTTFNSWGEVGQWYA
                     DLEADRTAPDDKIRAKVAELIRDRKTDQEKIEALYEFVAKNFRYVSLSLGQGRYQPHA
                     ATEVLANQYGDCKDKHTLLASMLNAAGLRAYPALMNSSRKIDPDVPSPGQFDHVISAI
                     PLGNETFWADTTSEVAPFRLLSPSLRDKKALLVPVNAAARLETTPAAPPFVSSEVAEI
                     EAQVSELGKLNGQARLVLRGDAEMDFRMAFRRTPKSQWKELGFFLASAIGVRGGEVTE
                     IKTSDIEALNVPFEISFKVTSEDFMDWSAKKLTLSVPLPDVTLRDVAAEKEEGTKPIQ
                     IGVPININYRLKLSLPAKYQVRLPVPLKVNRDYATYSSVYNLQENVVRAERTFQSRLG
                     ELPPARTPDYRAFVAAARADAAQTMSLETTNVADASSVPDSVKTDDLLSTAEAAAKNN
                     NFALVESLLQRVLEKEPKHKTARRQLGYALFIQGKFTEAVQVLRDHTTENPFDDVAYT
                     ALGRALWALQDHAGAEKAFRKQLEITPLDKWGHGNLGLLLIERRKYKDAIPELEQGIS
                     LNPEQEATYQVGLGRAYLGIGEAEKGTAAFDRAVKLAPGQTTWNNLAYYFATHKVQLD
                     RAQQYAESAVAEASTRLRNAELPSLTPRDLQDVSALAAYWDTLGWVLFQKGDIDNAEK
                     YIVAAWRLAEHGEVGYHLGQVLEKRGKTAEAIRIYALAAYASRTVPEALESLERLVGK
                     DKSLEAMNKGAMETINARTINLGPATVNVKGATEARFFVALVPGQNGRAQVADVKFIS
                     GDEKLRPLANQLKSGNFGPVFPDDKVTKIIRRGTLSCIGKDNVCSFIMASPDYVPLD"
     gene            6085..6573
                     /locus_tag="VIT19_04780"
     CDS             6085..6573
                     /locus_tag="VIT19_04780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838330.1"
                     /translation="MRQTSLIACVLAVSLFVSAIAPAAFAQQTRGDWTSVQSVAPGTE
                     VSVKLKDGKKVRGRFSSANDTELTILRKNKQQPIAKDTIAQVHRLERRAEKAKYAAIG
                     AGIGAAAGAGIGGAKAASGSSSDDGIYTLVGLVFGTGFGALGGLLWGSAKQKHVLIYE
                     AP"
     gene            complement(6869..7462)
                     /locus_tag="VIT19_04785"
     CDS             complement(6869..7462)
                     /locus_tag="VIT19_04785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838331.1"
                     /translation="MNNEQLNELLYQALETELGGVQVYTTALECVQNEDLKEEWEEYL
                     EQTQNHVQVMQNVFTELELDPETETPGRQVVRHHGESLVKAMEMALKNDKPEAAELVA
                     AECVVMAETKDHQNWELIGEAAKKAKADVAKVLKAAHEEVEEEEDEHLYHTKGWAREL
                     WIKSLGMKAVLPPPEEEKKVKTAIGAARAKHARADML"
     gene            7791..>8623
                     /locus_tag="VIT19_04790"
     CDS             7791..>8623
                     /locus_tag="VIT19_04790"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEY5838332.1"
                     /translation="MMLKRASTFVAAALLIALAAFPAFAQADLTKEQRELADYIKDHY
                     TKREVYIPMRDGVKLFAVIYEPKDKDKKYPIMFDRTPYSVAPYGPKEFKTLLGPSELF
                     AREGYIFVYQDVRGRYMSEGDYEDVRPYIHNKTGKQFDETTDAYDTVEWLIKNVPNNN
                     GRVGVWGISYPGFYTSMTGIDGHPAVKAISPQAPIGDWFHGDDTNHNGALFLAQNFGF
                     FAYMGQVRPSPTGTNDYVKPYPWGTQDGYKFFLEMGGLGKSGDLFWQKLGFRSKLWDQ
                     LL"
BASE COUNT         1991 a         2412 c         2400 g         1820 t
ORIGIN      
        1 gcggccaact gaccagacaa tcgcgtcttg cttgatttgc tcggcaagtt ccgcgcggac
       61 tgactcgtcc agaatctgct tcgagtcgtt cagtcgtctt agcttgtagt tcttcggcag
      121 aatcactgcg ccggcaatca ccggaccagc gagcggcgcc atgccggctt catcaactcc
      181 ggcgatgaaa ttgaatccct gctcccacaa atcgatttca aaccgcagca gattgtgcag
      241 ccgctgtcct tcagctcggt tctttcgcca gcgctcgcga atctgttttg cgacgtgatg
      301 cgcgccgttt ctcgaatcgc actcgagcgc ttcaatcaga cctttgggca cgggccgcgc
      361 gcgatcgacg taacgttgct tcagttcggg aattgatttg gcgaggattt cttcgagggt
      421 tgccatgcta tccaagccgc aggttaacgc ggatacgcgc ggatgcaaaa cttaattagg
      481 agttcagcgg ttttttctcg attctgcgcc ccaatgcaga agcgcgcacg aagtaagcgc
      541 gtctgatgat cgctggagag cgaaaggacg cacttactcc gtgcgtgctt cagcagtact
      601 catcagaacc agagaggaaa gcagtgtcag gccttcatct gtgcagatcc gcgccaatcc
      661 gtggctaatt ctgcgggcta ctcgccgcgt aaagctttca acgcaaccgt gtccaaaacg
      721 tacacatccg ccgccgggat gtctccgacg gagatggtaa acgccggttc gctcgtttgg
      781 cgcaaacgtt ggagcattgc ttgattgctg tagtacacgc gtccgcccgc gtcgataaga
      841 aagtctccat ccgaaaactt ctcaaggtct gcaggcggag aaaactcagt gcacgataga
      901 tccgttcggc cggctcgctt cgcgtaataa tcagcgaggg tgggaatctc agtgcctacc
      961 cgcgcacccg gtcgtgcccg tgcggcgatc tctttcatcg catcgaacat gtacgcgtcg
     1021 taaaactcgt cttgcggaaa atacgcgccg gcaagtgcgc cgcccgccaa cgaattcatg
     1081 tagagccgat aatgcggcgt cgcgctggcg gctgaccaca tcgtcgaaat gatgatgagc
     1141 gacaccaaag ccgcccgcgc ataaaccggg atggccgctt gatcggagat tcccctgatc
     1201 actttcccga actgtcgtcc ggcaaactga atcgcgatcg ccgctgtgat gattaccgcc
     1261 ggcatcaacg aagtggcgta tcgcgtgaat tttccgccgg tgaacgtgaa cgtcaatccc
     1321 cagaaaaaca gccaaaacag taagaaatat cggccatcac cggtcgcgcg ccggaagagc
     1381 aggacaacgc cgccggcgaa cgcgatcagc gcagcgatag ggagcttcac tcctaaaaga
     1441 acaaagtaga agtaccacgg ctcgccgcgc agccaatcaa acgcgcgatg cggatacagc
     1501 agtcccataa actcatagct gtcgtggccc atcattttgg agccggcgaa cttcgcaatg
     1561 gtccgccacg tgtcgggcag cacaatcgtc gggttgaaaa tcaggaacgc gacacccatt
     1621 accagaaaga acttcagcca cttcttcttg cccagccgcc aacgcgtcgc cgtcattccc
     1681 tgaaacacgt agtaatacgc gaccggaatc gcgaacaact gcggaacata ctttgaagcc
     1741 atcatcgcgc cgaaactcgc cgccgccgcc caataaaagc gatcaggatt ccgatgcggt
     1801 tggctttccg cgacccgttg tccgcgtagc caaaacacgt tcatcaacag gaagaagaag
     1861 acgacgaagg tgtcttcctt ggcgatgcga ttgaagctga tggtcagcgg atcgaatgac
     1921 cagagcgcag ccgaaattaa gccgacttcg agcccgaaca gctccatcgc gattaaaaag
     1981 atgagcgccg cggacagcgc cccgagaatg gcgcccggga tgcgcaaagc cgtctcaacc
     2041 ggaatgttca gcgcgggatt cgaagcgaca agtgcgttcc atcgctcgca cgcgatgacg
     2101 ctgacggtca gcgccgcctt catcaacaaa ggatgttcac tattggcggc ggtcagaccc
     2161 ttggctcgat attctgtgac cgcgttcagt ttgttgagtt cgtcttcgct cagagcctct
     2221 ttgctcaatc cggccgtgcg aaatcccaag ccggcaagga cgaacatgca gagcattgcc
     2281 gcgagcagca accggctcaa agaccgcgtt ccaacttgtg aaaaaaggtc aggccgcaag
     2341 ccggcggtga cgatcggctg ggctggggac aagtttcgcg aaacctccag ggcgaatgct
     2401 gagccaattt ctgaggaaca cttagggagg gtcagggact caacaagcgg caaagcttat
     2461 cgttaattgt cggcgggagc aacctaatca agtgcctttg cgtcagagac tgcgcgggaa
     2521 aacacaactg gcgctgtggt aaatacgctt tgccgggccc gttacctgcc gtacactgtc
     2581 ggctgctgta cccccgacag ttccttacaa ggagaattac catgcgttcc cccaatccga
     2641 cggcgttaaa ggcggtcgtc gcctgtcttc tatccgcgct gtttagccag acgttaattg
     2701 cacagctaca gccgccaagg tcttcctcgg cttcgccaaa gccaactcca cagatcgaga
     2761 cggcaccaga ttactcacag gaagcccttg ttattgagca catgaagacg gcctaccgtt
     2821 ttgaaaagaa cggtacaggt cagcacgaac taatagtgcg tgtgaaagtg cagagcgaag
     2881 ctgctctgaa tcattttggg caactggttt tgccgtacgt gtcggcgaac gagaacctgg
     2941 atttccctta tattcgcgtc agaaaagcca atgggacgac cgtaaccgct tcggcgaccg
     3001 acgttcagga tctgaccgcg ccgatttcgc gcgaggcgcc cgtttacaca gacgttcgtc
     3061 aaaagcatgt gacagttccc ggattgcggc ccggcgatac gcttgaatat cacgccgttt
     3121 ggaagatgca cacaccgctg gcggccaacc acttttggtt gagccacgat ttcgtcacgc
     3181 gcgacgtgat tgtgctcgac gaacaattgg aagtgaacgt gccggctgaa actgcggtga
     3241 aactgaaggc tgaaaagggg tttgacccag ccgttaaaga gctggacgga aggcgcatct
     3301 atgtatggaa gcatagcgtc ctcaagcgcg ttgaagagca ggatgacgat aaggaagccg
     3361 cgcgccgccg aagggaagag ctggaagatc ccaaaccggc aatggtccaa ctgaccactt
     3421 tcaacagttg gggagaagtc ggccagtggt atgcggacct cgaagccgat cgcactgccc
     3481 ctgacgacaa gattcgcgcc aaggtcgccg aattgattcg cgaccggaag acagaccagg
     3541 aaaagatcga agcgctatac gaattcgtcg cgaagaactt tcgctacgtc agtctgtcgc
     3601 tcgggcaagg ccgctatcag ccgcacgccg cgactgaagt gctggcgaac cagtatggag
     3661 attgcaaaga caaacacact ttgctggctt cgatgctgaa cgcggcaggc ctgcgcgcgt
     3721 atccggcttt gatgaattct tcacgaaaga ttgatccgga cgtgccgtcg cccggccaat
     3781 tcgatcatgt catcagcgcg atcccactcg ggaacgaaac attctgggcc gacacgacct
     3841 cggaagttgc gccattccgt ttgttatcgc catcgttgcg cgacaagaaa gcgcttttgg
     3901 ttcccgtcaa cgccgccgcc cgtttggaaa ctactccggc ggcgccgcct tttgtgtcga
     3961 gtgaggttgc cgaaattgaa gcgcaggtca gcgaactggg aaaactcaac ggccaggcgc
     4021 gactagtgct gcggggcgac gctgagatgg atttccgcat ggctttccga cgaacaccga
     4081 agagtcagtg gaaagagttg gggttctttc tcgcgagcgc gattggtgtg cgcggcggcg
     4141 aagtgaccga gatcaagacc agcgatatcg aggcactaaa tgttcccttc gaaatcagtt
     4201 tcaaagtgac ctcggaggat ttcatggatt ggtcggcaaa gaagctcacc ttgagcgtgc
     4261 ctttgcctga tgtcacgctt cgcgacgtcg ctgccgaaaa agaggaggga accaagccca
     4321 ttcaaatcgg cgttcctatc aatattaact atcggctgaa acttagcctt ccggcaaaat
     4381 atcaggttcg ccttccggtg ccgctaaaag tcaatcgcga ctacgccacg tactcgtcgg
     4441 tttacaactt gcaggagaat gttgtgcgag cggaacgcac gttccaatcg cggctgggtg
     4501 aattaccacc agcacggacg cccgattacc gcgcctttgt agcagccgcg cgcgcggacg
     4561 ccgctcaaac gatgtccctc gaaactacga acgtggccga tgcttcgtcc gttccggatt
     4621 cggttaagac ggacgattta ctgtcaacgg cagaggcagc tgccaagaac aataactttg
     4681 ccttggttga atcgctgctg cagcgagtcc tggagaaaga gccaaaacac aagaccgcgc
     4741 gtcgccaact tggctatgcg ctgttcattc agggaaaatt cacagaagcc gtccaggttc
     4801 tgcgcgatca cacgacagaa aatccgttcg atgatgttgc ttacacggcg ctgggccgag
     4861 cactttgggc tctgcaggat catgccgggg ctgaaaaggc gtttcgcaaa caactcgaga
     4921 ttactccgct cgacaagtgg gggcacggca atctcggttt gctcttgatt gagcggcgaa
     4981 aatacaagga cgccattcct gaacttgaac aaggcatctc actaaatcct gaacaggaag
     5041 caacctatca ggttggtttg ggacgcgctt atctgggcat tggcgaagcg gaaaaaggga
     5101 cggctgcttt cgatcgcgca gtcaaacttg cgccgggcca aaccacctgg aacaacttgg
     5161 cttattattt cgcgacccac aaggtgcagc ttgaccgcgc ccaacaatac gccgaatccg
     5221 ccgtggccga agcttccacc aggttgcgga acgcagaatt gccgagcctg acaccgcgag
     5281 atctgcaaga cgtcagtgct ttggcggcgt actgggacac gctgggttgg gtcctattcc
     5341 agaaaggcga cattgacaac gccgagaaat acatcgtggc ggcgtggcgc ctggccgagc
     5401 acggtgaagt tggttatcac ctcgggcagg ttctcgagaa gcgcggtaag acggccgaag
     5461 caattcggat ctacgcactg gcggcatacg cgagcagaac cgttcccgaa gctttggaga
     5521 gcttggagag gctggtgggc aaggacaaga gcctcgaggc aatgaacaaa ggcgcgatgg
     5581 agacgatcaa tgcccgcacg attaacctcg gcccggcgac ggtaaacgtc aaaggggcga
     5641 cggaagccag gttttttgtt gcattggttc ccggtcaaaa cggccgggcc caggtcgctg
     5701 atgtgaaatt catctccggc gacgagaaac tgcggccgct ggctaatcaa cttaagtccg
     5761 gaaacttcgg cccggtcttt ccggatgaca aagtgacgaa gatcattcgc cgcggaacgc
     5821 tttcgtgcat cggcaaagac aacgtgtgct catttatcat ggcaagtccg gattacgtgc
     5881 cgctggattg attgactcgc acgtcgcgat tactcacgtc ctcgaactcc ctaaaccacc
     5941 ctacccgtgt cagtatcctc caggtgtctt tgaattgctg cgtccccaag cgcagctttt
     6001 ggctttcagc ggacgttttc tcgggccctc aacttgcacc gcgacgcagg gcagtaatca
     6061 aaaacattct ggtgtgagga aaaaatgcga cagacatccc ttattgcatg cgtgctggca
     6121 gttagtctct tcgtctcagc gattgcaccc gcggcttttg cccaacaaac gcgcggcgac
     6181 tggacgagcg ttcagtcggt tgcaccaggt accgaggttt ccgttaaact caaagacggt
     6241 aaaaaagtgc gcggcagatt ctcaagcgcg aacgacacgg agttgaccat ccttcggaag
     6301 aacaagcagc agccgattgc aaaggacacg atcgcgcaag ttcatcggtt agagcgaaga
     6361 gccgaaaagg ctaagtatgc cgcgatcggg gccggtatcg gcgccgcagc aggcgcaggc
     6421 attggcggag cgaaagctgc ttctggttca agtagcgatg acggtattta cactttagtg
     6481 ggcctcgtgt ttggtaccgg gttcggcgcg cttggcggct tactgtgggg ttctgctaaa
     6541 cagaagcacg tcctgatcta cgaagcgccg taaggaagcg agtgtctttg attgttctag
     6601 aggtgggcta ttgcccgctc aatctagaag acgtgaaggg gcgggcggag ttccggtgcc
     6661 gtcccttcgc ttcctcgcga ttgtcatctc acgcccgcta aagcgggcga cattcaataa
     6721 tggtgtctcc aatcccagcg ctgaagcgct gggctactat caaaagtccg ctacgcggac
     6781 aaaagaaaaa aggccaggcc gccgcttggc tgcctggcct tctcttcgat caagacggca
     6841 agcgagacgc ttgcactcca gtcactatct aaagcatgtc tgctcgcgcg tgttttgcgc
     6901 gcgccgcacc gattgcggtc ttaactttct tctcttcttc cggtggcggc agcaccgcct
     6961 tcatgccgag cgatttgatc caaagctcgc gggcccagcc cttcgtgtga tagaggtgct
     7021 cgtcctcttc ctcttcaact tcttcatgcg ccgccttcaa aaccttagcg acgtcggctt
     7081 tggctttctt ggccgcttcg ccgatcagtt cccagttctg atgatctttg gtttcggcca
     7141 tcacaacgca ttcggcggcc actagttcgg ctgcttcggg cttgtcgttt ttcagcgcca
     7201 tttccatcgc cttcactaac gactcgccgt ggtgccgcac gacctgccga cccggtgttt
     7261 ccgtctcagg atcgagttcc aactcggtaa acacattctg cattacttgc acatgatttt
     7321 gagtttgttc gagatactct tcccattctt ctttcaggtc ctcgttttgc acacactcta
     7381 acgccgtggt gtaaacctga acgccgccga gttctgtctc caatgcctga tacagaagtt
     7441 cgttcagttg ttcgttgttc atttcttcct cccagtattt tagataagtc cgcgaacgta
     7501 gctgcaaatc cgaggccgca tgctgatctg tcacaaaccg tgtgaagggc tcggcattat
     7561 gcggcccggg agatgaaaca ggcctgagca aacgagctct gtgcttgaga attagacaag
     7621 cgcgagagcc caacgtacga gacacgtaca gacagccggg caccgagcgc accgggttcc
     7681 tccctgaatt gccatcgcgc cacagcacta cctgcgtttg gtgcgagagt cgatcctgat
     7741 tacaatcgcg gcgaaaaccc gctggtaatt ccgtctgact gaggtctgtc atgatgctga
     7801 aacgtgcgtc aactttcgtc gctgctgctc tgctgattgc gctggctgcc tttccggcat
     7861 ttgcgcaggc tgacctgaca aaggaacagc gcgaactcgc tgattacatc aaggaccatt
     7921 acaccaagcg tgaggtctac attccgatgc gcgacggggt gaagctgttc gcggttatct
     7981 acgagccgaa agacaaagat aagaagtatc cgatcatgtt cgatcgcacg ccgtacagtg
     8041 tcgcgccgta cggaccgaaa gagttcaaga ccctgcttgg accaagtgag ctgttcgcgc
     8101 gcgaaggcta catctttgtc tatcaggacg tgcgcggccg gtatatgagt gaaggcgatt
     8161 atgaagatgt gcggccgtac atccacaaca agaccggcaa gcagtttgat gaaactacgg
     8221 acgcgtacga cacagtcgag tggctaatca agaatgtgcc gaacaataac ggacgcgtag
     8281 gggtttgggg catttcgtac ccgggtttct acacgtcgat gaccggcatc gatggccatc
     8341 cggccgtcaa agctatctcg ccgcaggcgc caattggaga ttggtttcac ggcgacgaca
     8401 cgaatcacaa cggcgcgctg tttctcgcgc agaacttcgg cttctttgcg tacatgggcc
     8461 aggtgcgccc gtcgccgacg ggcacaaacg attacgtaaa gccatatcca tggggcacgc
     8521 aggacggcta caaattcttt ctcgaaatgg gtgggctcgg aaaatccggt gatctgtttt
     8581 ggcagaaact gggctttcga tcgaagttgt gggatcagtt gct
//
LOCUS       DATDBY010000256         2409 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1653191, whole genome shotgun sequence.
ACCESSION   DATDBY010000256 DATDBY010000000
VERSION     DATDBY010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1653191"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..574)
                     /locus_tag="VIT19_04795"
     CDS             complement(35..574)
                     /locus_tag="VIT19_04795"
                     /inference="COORDINATES: protein motif:HMM:NF016290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptE family protein"
                     /protein_id="HEY5838333.1"
                     /translation="MKRTIRAAALLLSLLFVSGFTECYKPVTKTQLPPHIKTVAVPAF
                     QNNALRFKIEHRFTEAVMKELIRRGHGLRVQSEREGADAVVDGVVKSFNFSGVLLDDK
                     GRARIFEVTIVAAVTVRDQHENRVLYDNQNFVFRGEFEFANDPRNFFNEEDPAVMRMS
                     RSFAESIVSTLVNGFGVKN"
     gene            complement(596..805)
                     /locus_tag="VIT19_04800"
     CDS             complement(596..805)
                     /locus_tag="VIT19_04800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014570681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEY5838334.1"
                     /translation="MAIGTVKFFNKEKGYGFITNDAGGPDAFVHISAVEAAGMGTLKE
                     GQKVSYDLEQGRDGKSAAINLTDAS"
     gene            888..1292
                     /locus_tag="VIT19_04805"
     CDS             888..1292
                     /locus_tag="VIT19_04805"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5838335.1"
                     /translation="MADPIPIGPTLSQIAQIFVNVKDLDRAIAFYRDMLGMRFLFTAP
                     PGMAFFECGDIRIMLGRADRPEIDHPASIIYYKVDDIEKVYEVFNARGVEFIVKPHLV
                     APMPTYDLWLADFKDSEGNILALMSEVPKEVA"
     gene            complement(1398..>2409)
                     /locus_tag="VIT19_04810"
     CDS             complement(1398..>2409)
                     /locus_tag="VIT19_04810"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEY5838336.1"
                     /translation="SGDTIEEINGERISNPDELVAALDRSPADKPALIKIYRVEWNPI
                     LRLPRDGLLPGASAEERLGIGSWARGRDRRATGFFNHWTTYSESLQLLASLGLGLLIA
                     LPRKRSKWTVLLFLALAIMCGALLLTVVRASWLAFLASAIVMALIGLRWRALLIVGVC
                     VVPLVVAGLFLLQQKRNVGFFDSKDDSIRWRQTVQREGLQLLKSSPRHLLVGVGMDSI
                     KAHWREWKLFDNGRLPMGHMHSDYLQIALERGVPALIAWLALMALYARMLWRLQRQLA
                     KESWIERGVVLGALGGLVGFMISGLVHYNWGDSEVVMIFYLIMGLSLVVNREAQLQNR
                     EQ"
BASE COUNT          523 a          707 c          654 g          525 t
ORIGIN      
        1 gattggagga gttcctggcg gctgcgtacg ggcattaatt cttcacgcca aatccattaa
       61 ccagcgtcga gacaatcgat tcggcaaagc tgcgcgacat gcgcatgacg gccggatcct
      121 cttcattgaa gaaattgcgc gggtcgttcg cgaattcaaa ctcgccgcga aagacgaagt
      181 tctggttgtc gtagagcacc cggttctcgt gctggtcacg cacggtgacg gcggccacga
      241 tcgtcacctc aaagatgcgt gcgcgccctt tgtcgtccag caacacgccc gagaaattga
      301 agctcttcac gacgccgtcg accaccgcgt cggcgccttc acgttcgctc tgcacgcgca
      361 aaccgtggcc gcgacgaatc agttctttca tcacggcctc ggtgaagcga tgctcgatct
      421 tgaaccgcag ggcgttgttc tgaaacgccg gcacggcgac ggttttgatg tgcggcggga
      481 gctgcgtctt cgtcaccggc ttgtagcatt ccgtgaagcc ggacacgaac agcagagaca
      541 gaagcaaagc ggccgcgcga atcgttcttt tcatgatttc tgatgcgaag agcgtttaag
      601 aagcgtccgt gaggttgatg gcggctgact tgccatccct gccctgctcc aggtcatacg
      661 agactttctg gccttctttg agggtgccca tgccagcggc ttctaccgcg gagatatgta
      721 cgaaggcatc ggggccgccg gcgtcgttgg tgatgaagcc atagcccttt tctttgttga
      781 agaatttcac tgtgccaatt gccattgtcg tctccctttt tacttttgtt gataatacgt
      841 cagcgtgcgt gttatacgga agccgctcaa actacgagga gactcaaatg gccgacccta
      901 ttccgattgg cccgacgctg tcgcaaatcg cgcagatatt cgtcaatgtt aaggaccttg
      961 accgcgcgat tgctttttac cgcgatatgc tgggaatgag gtttcttttc accgcgccgc
     1021 ccggaatggc gttcttcgaa tgcggcgaca ttcgcatcat gctgggccga gccgaccggc
     1081 ccgagattga tcatcccgcg tcgatcatct actacaaagt cgatgacatc gaaaaggttt
     1141 acgaagtttt taatgcgcgc ggcgttgagt tcattgtgaa gcctcacctc gtggcgccaa
     1201 tgccgacgta cgatctttgg ctggcagact ttaaagattc agaaggaaac atcctcgcgt
     1261 tgatgagcga agtgccgaaa gaagtggcgt gacgttacag aaccgcgacc ggtagggagc
     1321 gggttaagta ttcgacctga ccctaaatcg ccgttcttat gtgttcttac aagcatggtt
     1381 ctgcctgatc ccgctcgcta ctgctcgcgg ttctgtaact gagcttctcg atttacaacc
     1441 aaactcaatc ccatgatcaa gtagaagatc attacgactt cggaatcgcc ccagttgtaa
     1501 tggacgaggc cgctgatcat gaaaccgacg agtccgccca gcgcacccag caccaccccg
     1561 cgttcgatcc aactttcttt cgcgagctgt cgctgcaacc gccaaagcat ccgcgcgtaa
     1621 agcgccatca aagccagcca ggcgattaac gccggcacgc cccgttcgag ggcgatttgc
     1681 aggtaatcgg aatgcatgtg gcccatcggc agccggccgt tgtcgaacag cttccattca
     1741 cgccaatgtg ctttgatcga atccatccct acgccgacga gcagatgccg cggactgctc
     1801 tttaagagtt gcagaccttc acgctggacc gtctgtcgcc agcgaatgga atcgtctttt
     1861 gagtcgaaga acccaacgtt tcgcttttgt tgcagcagga aaagtcccgc gacaaccaac
     1921 ggcacgacgc acacgccaac gatcagcagc gcgcgccagc gcaagccaat caacgccatc
     1981 acaatcgctg acgcaaggaa ggcgagccac gacgcgcgca ctaccgtcag cagcagcgct
     2041 ccgcacatta tggcgagtgc caaaaacaaa agtacggtcc atttgcttcg tttgcggggc
     2101 aaagcgatca agagaccaag cccgagcgat gcgagcaatt gcaggctctc gctgtacgtt
     2161 gtccagtgat tgaagaaacc agtggcgcgt cgatcgcgtc cccgcgccca cgatccgatt
     2221 cccagccgct cttcggctga cgcgccgggc agtaggccat cgcgcggaag gcgcaggatc
     2281 ggattccact cgacccgata gattttgatt agcgccggct tatctgccgg cgaccggtcg
     2341 agcgccgcaa caagttcgtc cgggttcgag atgcgctcgc cattaatctc ttcaatcgtg
     2401 tcgccgctc
//
LOCUS       DATDBY010000257        16749 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2999790, whole genome shotgun sequence.
ACCESSION   DATDBY010000257 DATDBY010000000
VERSION     DATDBY010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 16749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16749
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2999790"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..783
                     /locus_tag="VIT19_04815"
     CDS             <1..783
                     /locus_tag="VIT19_04815"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEY5838337.1"
                     /translation="PRNEDHYVVMTFRRSLEKICTSLVRDVGRDKYDLMGYGLVVADG
                     LGGMAGGEFASRTALTKLIELIIETPDWIMGLEEGPKVEAVLDRMTDRFFRVDDTLKK
                     QAGRDPSLSGMGTTLTAAAILKNDIIIGHIGDSRAYLFRSGLLKQLTRDHTVAQELID
                     AGVGAADAVTNSMRHVLTAALGSLGTRIAPEVQRLQLRPYDEILLCTDGLTKMVDDKT
                     IASTLRTASSAAKACRDLTSLALAAGGRDNVTVIVARLGGSV"
     gene            969..1976
                     /locus_tag="VIT19_04820"
     CDS             969..1976
                     /locus_tag="VIT19_04820"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEY5838338.1"
                     /translation="MRNRKSMAGLMMLAFVIALANAVGAAAQSADNTRPSPVPQGEKR
                     KIQGVVSFRSGDTFKVRDPQGTVTTVILTATTKVSSHGMNKKGYAVTFIMKGLRLQAQ
                     GRGDTEGNLVADWVKFDEQDLRSAQALEQTDKLALDNQARIEAAEQAAREAAEQARIM
                     AGQIAENTALANEARAKAEAAQRTADQAFKDAALANNRINGLDDYDTIKTVPVLFKLN
                     SSVLDAAARQALDETAGWGKAEKAKGNANGWLVSVVGFADTTGNTARNRALSERRAQA
                     VIQYLVGVHGLDLRRLVQPFGFGEGKPVADNKTAEGRAKNRRVEVRVLQNRGIANTGR
                     R"
     gene            2057..3070
                     /locus_tag="VIT19_04825"
     CDS             2057..3070
                     /locus_tag="VIT19_04825"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEY5838339.1"
                     /translation="MKIRKSMTVLAALAFAFTLMTAFRASAQNSGNSSASPVPQGEKR
                     KVQGVVGTRSGDTFTVRDPGGAVTVVLLTSSTDVTSHSRGLRGKKDYPMTYIMRGLRV
                     QAQGRGDAEGNLVAEWVRFDEQDLRSAQALEQTDELAKENAQRLAAAEQAAREAAEQA
                     RIMAGQIAENTALANDARAKAEAAQRTADQAFKDAALANNRINGLDDYESVRAIPVLF
                     KVNSSALNPAARHTIDDAAAWAKGEKAKGNANGWLVQVVGFADTTGKTAKNRALSERR
                     AKAVIQYLVGVHGMDLRRLVQPFGFGEDKPTADNKTAAGRAKNRRVEITILQNKGIAM
                     KGN"
     gene            3860..4525
                     /locus_tag="VIT19_04830"
     CDS             3860..4525
                     /locus_tag="VIT19_04830"
                     /inference="COORDINATES: protein motif:HMM:NF025606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4344 domain-containing metallopeptidase"
                     /protein_id="HEY5838340.1"
                     /translation="MKVKALHAESESQVKNLISLLNETIDIPSDVEFSFEECSDSSVY
                     YDEDFDRVVICRQWLNEIERVLSRGLSEKAVVRQSVQSVASAVLLHETAHALIDVLNI
                     PVTGREEDAADQFSTLVLLNQKDGARKAMQVAYIYKMLSQDRVRNPPVYWDEHSLDIQ
                     RYYDTLCMIYGRDPKENQRYFVNDPLPEERAEICESQYKRIERSWKKLLTPYAKDSLW
                     QAQ"
     gene            4741..5124
                     /locus_tag="VIT19_04835"
     CDS             4741..5124
                     /locus_tag="VIT19_04835"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5838341.1"
                     /translation="MEHPELRELTILLIDDSDTLRKRVKNAFAIFAGFQVIGEAATGR
                     EAIEMARSLRPDLIVFEPSSATTGIHVLREIRRHDLRVLIAVFTTDYSAAMRETCRDS
                     GATFFINKSRIRDLLDISELARKCS"
     gene            complement(5333..6397)
                     /locus_tag="VIT19_04840"
     CDS             complement(5333..6397)
                     /locus_tag="VIT19_04840"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEY5838342.1"
                     /translation="MDCGHVAELLPWLKNGSLAGPEQELVREHLAQCHACQQELSETS
                     LAWSVYQQHLPTEALVNLAYDRSLVASQQTLYDRHLKACTDCAEQLDLVRASRRLEAA
                     EESAEPGVIIPLASRRAVRWQGASVWRYGAIAAALLFFIAAGGWLRSWQQLRNPQTLQ
                     SAHENALRERLAGLETENERLHQQETQLNQQQNQSNAEIAQLRSQIQEAQKRIEQQQD
                     QIKGELAAVSGQRPGKDQGAPQINILTLDIFPVGMIQRDTNRVRNSIVIPGNAKALTL
                     MLHSQAVSDSPSYYIEIVDAHGRVVWKSRGLVRQPTNDYTISIPADYLSPGSYTISIY
                     GTAAGKRVKVEGYEVGVKRS"
     gene            complement(6440..7003)
                     /locus_tag="VIT19_04845"
     CDS             complement(6440..7003)
                     /locus_tag="VIT19_04845"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5838343.1"
                     /translation="MLADDEAIIAGFLNGEREALETVEGWIERAASPFRRRLFSHWDD
                     LQQAARMEVTRVLRQGKFRGESSLKTYLWQVVNHACINHVRALSRQPSVDLESISQRP
                     SSSDGSPLDQILEKESEEILLRVLEEMPAACRELWNMILAGLSYREMSLRHGVSEGTL
                     RVRVLRCRKSALAVRQQLIAGAQGARL"
     gene            7370..13939
                     /locus_tag="VIT19_04850"
     CDS             7370..13939
                     /locus_tag="VIT19_04850"
                     /inference="COORDINATES: protein motif:HMM:NF012211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEY5838344.1"
                     /translation="MRTPTAAPQTFVRFIILVLALGILAGTGYAWRTLTRSVHAYAYG
                     SIEARTNAHSAAASAAYASAPLSLDPGQARFHPHVNLSNTGGQTSNLSDVAFAGNKVF
                     VAWHEMGAASEVRFRASTNGGASFANSPSGQVLATIPNGDTLFSVQVAAFGNTVHVIY
                     SSGASEATAQVSYRSSINNGVSFSSPVILAGGPGGSPFPDIATDGAGNVQVVLEDRGG
                     TNDIHHRLSTDGGLTFGIAVNISNTGDESIKPRIAANGANIGVVWQENGSGGSEVQFI
                     HSTDGGLSWPGPSQNLSNSAGTDSTSPDIGYGNSIQVVWAEGLSVAHRSSADLGATFS
                     ALANVATAAAGESIRGPRGAANGLLAGIIWMTADSSNVIHGPFLRRSEDGGATFAAAQ
                     DVANGLAGAGVDPAAIAAAPSLRIVWSRSLSGNATDAEVLFAREISCSVYWANPVNGN
                     FATAANWSTGVVPTSASDVCIQVDGDYTVTSSAGRTINSLVVGDPDNTGSQTLQISGS
                     TLTVLNGALNSSSGTLGLENITGTVASTLSVQNGVLTNIGTVDVNQGTGGLRNITADL
                     VNDGTVNINANTSFNNGAGVYTNNSILNIAAGRTLSITGSNFNRQTFNQNGGTLNIAG
                     AFNLTSFVTFNFNGGSITGIPVISTGTLNIGPGSTGAAEFSMRGAGNTLSGDIAPAQT
                     VNINANTTSPVTLTAVNSFTNAGTINLETVASTGPSNLQVNSGVLTNTGTINVKPGTG
                     GGRSITASFVNDGTINLDANTSFNDTNGVYTNNNILNIAAASTLSMAGGTISNSQTFR
                     QNSGAITGGGNFNLTNATFFGRGNVTANLSLVNSNMNPGASPGVLNITGNYTQDSASD
                     LFIELGGTLPGTGFDQLNISGTATLSGRLNVSVINGHCPEGIYEFMTFGSRVGDFTTK
                     TGLTTTTGHTFTAIPGANNYVLSTSGPACNFRPVANDDSYSTNEDTVLRKFASAGVLA
                     NDTDNENSVLTAILVSGPSHGALTFNANGSFTYTPNDEFIGTDSFTYTANDGTLDSNV
                     ATVTITVNAVNDPPKANNDSATVDEDSGATAIDVLANDSTAPDTGETLTITAVTLSAH
                     GSVAITGGGTGVTYTPNANFSGADGFNYSISDGNSTETAHVSVTVNPLNDAPDAQDDN
                     TSVTEDSGANPIDVLANDTFAPDAGETLTVTAATQATNGTVAITGGGTGLSYTPNANF
                     NGSDSFTYTISDGNGGTDTATVNVNVTTVNDPPDAVDDAVTVAEDSGAINISVLANDS
                     SAPDTGETLTVTAVTQGANGTVAITSGGSGVSYTPAAHFFGPDSFTYTISDGNGGSDT
                     ATVNVIVTAVNDLPVALNDSYTTGEDSILTVNSAGGLLANDSDVDSSTLTALLVNGPT
                     NGTLGLNPDGSFSYTPNPNFFGTDGFTYRAQDGQADSNVASVVITVNALNDAPDAVED
                     EVTTEEDTAVNIPLLANDTDADNDSLAVHSVTQGSNGAVVNNPEGTVTYTPNGNFNGN
                     DSFTYTLSDGNGGTDTTTVNVTVTPVNDAPAAVDDQANTDEDTAVQIAVRANDADVDG
                     GDALTVVAVAQGTSGAVVINPDGTVSYTPNANFNGSDSFTYTIEDGNGGSSSATVNVT
                     IAPINDPPDAVNDTASVQEDSGVNAINVLVNDSFAPDTGETLTVTAVTQGASGAVAIT
                     GAGTGVSYTPNGNFNGSDAFDYTISDGSGGTDTATVTITANAVNDAPVAVNDSYSTNE
                     DNPLVVGAAGVLSNDSDVDGDALTAALISGPSNGALMLNPNGSFTYTPAANFFGTDSF
                     TYKVGDGALDSNTATVTITINAVNDPPDALNDSATTNQNTAIAISVLANDTDVEGHTL
                     TVTAVTQGANGGVIINPDGTVTYTPNAGFSGADSFTYTISDGFGGSDTSTVNVNVNPS
                     GQSALSRFVAFSREMTWLLNGTKVFTGDVGANTSLSVGPSPYDDDEDRDRRREVRIGE
                     EVKMLQSSSKVVGDTIWLRHNSQVFGVHYNELINKHGTVLGLSQQPLPLPLLTMPELP
                     LIIPGTQDIEVKKNKTHTIAPGRYRKITVQHGGTLILTGGIYHLSTLDVRTSAKVVFR
                     GTSEVRIKNEMDTDARSYIGPDSSVSGLDASDIIFYVAGGDDKGRRHEDDLEPGYREE
                     EVSPTVVQIGVENTIKANIYAPNGTVWIKKGGKATGAFIGKRARIGVRVELTLDSAF"
     gene            14277..>16749
                     /locus_tag="VIT19_04855"
     CDS             14277..>16749
                     /locus_tag="VIT19_04855"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5838345.1"
                     /translation="MRQRCPILLSLALISGFLFPSIILAHTRSPSSRWPVVAAQDDKD
                     VRALVRDHRVERSLESKQLHVYRIPAAVGHFLSIAVEQPDTDVVVALFAPDGAKVFQT
                     TSADFRLNRTRVYAIANQVGDYRMEVRAFDQGAPAGRYSITLDALRQATATDKSRVAA
                     RGFLEKANSEWRWGNPETFRKAVESYVEALALWRAVEDKNGEADTLAFLSHAYRNLGD
                     YPNAVQSAEAALHVSKAIGDHTGEAWATALLAEAFAGMGQVDKQLEYFYKTLHIHHNA
                     GNKRGEASALLGLGQYHLGSADYQKALEFIAQSLSLSRSINNRPREARALFNLGLAYW
                     LIGDYQESLEAYRQCLPYYQAVGDVVQAMSILDNMGLVYYALGEYQKALDCYAQTLAD
                     RRSRNQHSAVADTLTGIGTVYAAMGQNQQALENLNQALTIYREVGNRTGVPYALRNIA
                     SVYISLKDPGKALDYFNEALPEDRALRDQPAEIKALSGLAMAHRDLGNLNKARTYIEE
                     ALDIVESLRSRLTSQELRAAFFASKWSYYQFYIDLLMRLNQQKPDAKFDAAALQASER
                     ARARSLLDLLAEAKVDLSEGIDPALKQKEKEIQGRITRANGQLIQALSASPVNKDLVA
                     QLNEELKQTENSREQLEVQIRKAHPKYAELKYPTPLKLEAIQDLLDEHTALLEYSLGQ
                     DRSFLFVVSKQGLKSYALPPAAEINKLVQEVRSTVEQPGRREFGSFVSRSRKLYDVLI
                     APATNELKEKRNLLIAPDGALYYLPFEALLTGLPQSEQGEMSYLLKRWGVSYVPSASV
                     LANLRQSQKQAEKKPGRREFVAFADP"
BASE COUNT         3891 a         4811 c         4706 g         3341 t
ORIGIN      
        1 ccacgtaatg aggaccacta tgtggtgatg actttccgcc ggtcattgga aaagatttgc
       61 accagcctgg ttcgggacgt cggtcgcgac aaatatgatt tgatgggtta tgggttagtg
      121 gtcgcggatg gcttgggagg aatggccggc ggcgagtttg cgagtcgcac ggcgctgacg
      181 aagctaatcg agctgattat cgaaacgccc gactggatca tggggcttga ggaagggccg
      241 aaagttgagg ccgtcctgga ccggatgact gatcggttct ttcgggttga tgacactttg
      301 aagaaacagg ctggaagaga tccctcactc agcgggatgg gcacgacgct gacggccgcg
      361 gcgatcttga aaaacgatat catcattggg cacataggag attcgcgtgc ataccttttc
      421 cgcagcggtt tgctaaagca gctcacccga gatcatacag tggcgcagga attaatcgac
      481 gccggggtcg gagccgcaga tgcggtcacg aactccatgc ggcacgtcct gacggcggcg
      541 ctgggttctt tgggaacgcg gatcgccccg gaagtgcaaa ggcttcagtt gagaccgtat
      601 gacgagattc tgttgtgcac tgacggactg acaaaaatgg ttgacgacaa gacgatagcc
      661 tcaactttgc ggaccgcctc ctcggccgcc aaagcctgca gagatctgac ttcgctggcg
      721 ctggccgccg gcgggcgcga taacgtcact gtcatcgtgg cgcgccttgg tggctcggtt
      781 tgacaggacg ttttgttggt aattctccca gcttttcctc aaaaaactgt cagaactgac
      841 agtaggcaaa aaactcaaca tttctacaat ttgttgtgag acgtaggtgt tctgaccccc
      901 agcgttgggg cccggaagaa actgacggct attgttcaca agtaaacact ttagaggaga
      961 tgatcgacat gagaaacaga aaatcaatgg ccgggctgat gatgctggcc tttgtaatag
     1021 cgctggccaa cgcagtcggg gccgcggcgc aaagtgcaga caacactcgc ccatcaccgg
     1081 tgccgcaggg tgagaagcga aagattcaag gcgtcgtaag tttccggagc ggcgacacgt
     1141 tcaaagtccg cgatcctcag ggcaccgtga ctacggttat tttgactgcc accacaaagg
     1201 tcagctcgca cggcatgaac aaaaaggggt acgcggtgac cttcatcatg aagggattgc
     1261 gtttgcaagc ccagggtcgt ggagatactg aaggcaatct ggtagctgac tgggtcaagt
     1321 ttgatgagca ggacctgcga agcgcccaag ctctcgagca gacggataaa ctcgccctcg
     1381 ataaccaggc ccggattgag gctgccgaac aagccgcgcg tgaggcagca gagcaagcgc
     1441 ggataatggc gggtcaaatt gcggagaaca cagcactcgc taatgaagcc agagccaagg
     1501 ctgaagcggc acaaagaacg gctgatcagg ctttcaagga tgccgcgctg gcgaacaatc
     1561 gtatcaacgg tctcgacgac tatgacacga tcaagacagt cccggtcctt ttcaaattga
     1621 acagtagtgt tcttgacgcc gccgccaggc aagcgctcga cgaaacagca ggctggggaa
     1681 aggccgaaaa ggccaaggga aacgcgaatg gctggcttgt ttcggtagta ggatttgcgg
     1741 atacaaccgg caacacggcg aggaaccgcg ccctcagtga acgccgcgca caggctgtca
     1801 ttcaatacct ggttggcgtg catggtttag atctacggcg tttggttcaa ccgtttggtt
     1861 ttggtgaagg aaaacctgtc gctgataaca agactgccga agggcgcgca aaaaatcggc
     1921 gagtagaggt cagggttctg caaaaccggg gaatcgcgaa taccgggcgc aggtaagact
     1981 cgagtcagtg cgcctgccat tctggttgcg ctggtttgcg acccgacgga ttgatgtttt
     2041 cttcaggagg atgactatga aaattagaaa atcaatgaca gtgctggcgg cgctggcctt
     2101 tgctttcacg ctgatgactg cattcagggc atcagcgcag aactcaggca acagtagcgc
     2161 atcaccagtc ccccagggtg agaaacgaaa ggtccaaggt gtcgtcggta cccgcagcgg
     2221 ggatacgttc acagttcgag atcccggcgg cgccgtgact gtggtgctct tgacgagttc
     2281 tacagacgtg acttcgcata gccgtggtct gaggggcaag aaagactatc ccatgaccta
     2341 catcatgcgc ggtctgcgtg tgcaagccca gggtagggga gatgccgagg gtaatttggt
     2401 cgccgagtgg gtcaggtttg atgagcagga tctgcgatcc gctcaggcac tcgagcagac
     2461 agacgaacta gctaaggaga acgcgcagag actggcggct gctgaacaag ctgcgcgaga
     2521 ggcagccgaa caagccagga tcatggcagg ccaaatcgcc gaaaacacgg cgctcgccaa
     2581 cgacgctcgg gcgaaggctg aggcagcaca acgaaccgcc gatcaagcat tcaaggatgc
     2641 tgctttggcc aacaaccgga ttaacggact cgatgattat gagagcgttc gcgccatacc
     2701 ggttctcttc aaagtaaaca gcagtgctct aaacccggcg gccaggcaca ctattgatga
     2761 tgcggcagcc tgggccaagg gggagaaggc gaaagggaat gccaacggct ggttggttca
     2821 agtcgtggga tttgcggata ccaccggcaa gactgcgaag aatcgggcgt tgagcgagcg
     2881 gcgcgcgaag gccgtgattc aatacctggt tggcgtgcat ggaatggatc tgcgccggct
     2941 ggtccaaccc ttcggatttg gtgaagacaa acccaccgcg gacaacaaaa ccgcggccgg
     3001 ccgtgcgaag aacaggcgtg tcgagatcac gattctgcaa aacaagggaa tcgcgatgaa
     3061 gggtaactag actcagaggt caattatctt caccccagag gttctctatc tatcgcttgc
     3121 aaagcatgct tgcgacttca ggacaggtga tatgagggac agtgagatcg agcaatgggt
     3181 ggtgagacat ctcgggctgc cggagctggc ggactcgaga gaagtgtgcg tcttatctcg
     3241 tgaagggatc gttacgctct atggaagtgt aacgaatcag acgtgtaaac aagcggtgca
     3301 cagagcggca cgtgacgcca agggagtaat cgctgtcatc aataaactcc aagcggagtc
     3361 ttccgaaact ggcctggtga caatatctct tggcgtgagt gccccgccgt cagccagacg
     3421 tgccgcctga cgccgcgcca ttgggacgta ctaaacaaag ccgctggctt cgaatccccg
     3481 caccgccgtc cgtcccttcc gaagtatctc tatgtatcgc tggtttcagc atcgcggcgc
     3541 gacatggacg aatcgccttc gtgacgtcgg taatgacgct ggctggactt gtgacgggcg
     3601 gggtcagcga agcggtgata ctcactatcg cccacgcgac ttcacgactc tgcggcggcg
     3661 ggtacttgcg ctctctgctt taactgtctt cgcaattgca agcgtgggca ggtggtactt
     3721 gccggttgca cgtactccag tagcggaggc agtcgcgatt caaactgccg gcacgctcgc
     3781 tgcttcaaga acagccgcat ttaaatcctt caccagacac ggattcactc tgaagactca
     3841 cccccgctac agggcgcgcg tgaaagtgaa ggctctgcac gccgagagcg aatcgcaagt
     3901 taagaacttg atctcgctct tgaatgaaac gatcgacata ccttccgatg tcgagttctc
     3961 gtttgaagaa tgcagcgatt cgtcggtgta ctacgacgaa gattttgatc gggtagtaat
     4021 ttgtcgacag tggctcaacg agatagagcg cgttctgtct cgcggtttat cagagaaggc
     4081 cgtcgtgcga cagtcagtgc agagtgtggc ttcagccgtc ctccttcatg agacagccca
     4141 cgcgctcatt gatgttctga acatccccgt gaccggccgc gaagaagacg ctgccgatca
     4201 attctcaacg ctggtgctgc tgaaccaaaa agatggcgca cggaaagcca tgcaagtcgc
     4261 ctatatatac aaaatgctat cgcaagacag ggtccgaaat ccgccggttt actgggacga
     4321 gcattcactg gatattcagc ggtactacga cacgctatgc atgatttacg gccgtgatcc
     4381 gaaagagaat caaaggtatt ttgttaacga tccacttccg gaagagcgcg cggagatctg
     4441 tgagagtcag tacaaacgaa tagagagatc gtggaagaag ctgctgactc cttacgccaa
     4501 agactcgctt tggcaggcac agtgaatatg ggcgtcacat gaaccgatta agcgcgaacg
     4561 aattggacct tccttaatca agtttcccgc caattacaca ctcgaacccg gggctcgcga
     4621 ccgtcgcttc tccgctagtg tcgaattctc tgttacacgg aggtccataa atgtatgacg
     4681 cagaaatcat aaacctgatg attgtcgaca tggcctcgcg tccgcaaact agcgctcagt
     4741 atggaacatc cggaactcag ggaactgaca atcttactca tcgacgactc ggacactctt
     4801 cgaaaaagag tgaaaaacgc gtttgccata tttgcagggt ttcaagtcat cggcgaagcg
     4861 gctaccggcc gggaagctat cgagatggcg cgatcacttc gtcccgactt gattgtgttt
     4921 gaaccttcct ctgctacaac tgggatccac gttcttcgcg agattcgacg ccacgatctc
     4981 agggtattga ttgccgtctt cacgacggat tactcggcag ccatgcgcga gacttgccgc
     5041 gactccggcg caactttctt cattaataag tctcgaatac gagatctatt ggacatttcc
     5101 gagcttgccc gcaagtgttc gtaatgccgc cgacagttag attttggttg gtttactaag
     5161 accaggtgat ggcaccccaa aatcgaacta aatccgttgg gagtcttatc tctggaggct
     5221 ggtgattggg cagagagata tctgcgggac gtttgcggga cggtgtgtca tttgagcggg
     5281 ttcatctccg gaggctaagt accacaactg gattaagcaa tgcctaagat gtctatgatc
     5341 tcttcacgcc aacctcgtaa ccttcaactt ttacgcgctt gccggctgcc gttccgtaga
     5401 tactgattgt gtagctaccc ggggaaagat aatcagcagg aatactaatc gtgtaatcgt
     5461 tcgtcggttg acgcaccagg ccccgactct tccagacaac tcttccgtgc gcgtccacga
     5521 tctcgatata gtagcttggc gagtcggaca cagcttgcga atgcagcatc aaggtaagag
     5581 ccttggcgtt gcctggaatg actatcgaat tacgcacgcg attcgtatcg cgttggatca
     5641 tacccaccgg aaaaatatca agtgtcagga tattaatctg tggcgcgccc tggtccttcc
     5701 ctggtctttg tcccgagacc gcagcgagtt cacctttgat ctgatcttgt tgttgttcga
     5761 tccgtttttg agcttcctga atctgcgagc gaagctgagc aatctcggcg tttgattggt
     5821 tctgctgctg gttaagctgc gtctcctgct ggtgcaaacg ctcgttctcc gtctcgaggc
     5881 ccgccagccg ctcacgcaac gcgttctcgt gggccgactg gagggtctgt ggattcctga
     5941 gttgctgcca gcttcgcaac caccccccgg cggcgatgaa gaacagaaga gccgcagcaa
     6001 ttgccccata ccgccacacg gaggcgcctt gccatctaac tgctcttctc gaggcgagcg
     6061 gaataatgac accgggttcc gcgctttctt ctgctgcttc aagacgccgg ctggcgcgca
     6121 ccaaatccaa ctgctcggcg caatcagtgc aagcctttaa atgacggtcg tacagcgtct
     6181 gctggctggc caccagagag cggtcataag ccagattgac cagggcttcc gtgggcaggt
     6241 gttgttgata gaccgaccag gcaagactgg tttcactaag ttcctgctga cacgcatggc
     6301 actgcgccag gtgctcgcgc accagttcct gctccgggcc ggccagtgag ccgtttttca
     6361 accagggcag tagttcagct acatgtccac aatccatctt tacccctttg aacacatagg
     6421 cgctgctatc aaagaaaagt tacagccggg ctccctgcgc accggcaatc agttgttgcc
     6481 gaacagccag cgcgcttttg cggcagcgca gaactcggac cctcagcgtt ccttccgaaa
     6541 caccgtggcg caggctcatc tctctgtagc taagacccgc caggatcatg ttccacagtt
     6601 ccctgcacgc cgccggcatc tcttcaagca cgcgcaggag aatttcctcc gactcttttt
     6661 ccaagatctg gtcgaggggc gagccatcgg aggacgacgg tctctgacta atactctcga
     6721 gatcaaccga aggctgccgg gagagtgcgc gcacgtggtt gatgcaagcg tggttgacga
     6781 cctgccagag ataggttttc aggcttgact cgccccgaaa cttcccttgc cttaaaacgc
     6841 gtgttacttc catgcgggca gcttgctgta aatcgtccca atgtgagaac agacggcgcc
     6901 ggaacggcga agcggctcgc tcaatccagc cttccaccgt ttcaagcgcc tcgcgctctc
     6961 cgttcagaaa accggcaatg atggcttcat cgtcggccaa caaagttttc gggctccggg
     7021 cggattgtat cagcagtcgc tggtcagtga tcagcagttc gtgattggta gtgacgtaat
     7081 ttgagttctc gcgcttcctc agcgctctct gtgtctctgc ggtgagtttt tctgcggaat
     7141 attcaccgcc gagacgcaga ggtcgcagag actaacgcgg agaaaactga aattaggtca
     7201 ccacccgtga tggcgccaaa cttttcttgt aacgtttttc ctccggcccc gcctattaga
     7261 tccagacaaa gacagacctc agatggaccg gcttgagaaa gccgattcta gacgcaccac
     7321 acgcagtctc gttgtttctt attgcccgct cttaaggaga aatgacccga tgagaacccc
     7381 aacagccgcc cctcagacat tcgtacgctt catcatcctg gttctggcct taggcatact
     7441 cgccggcacg ggttacgcat ggaggacgct gacccgcagc gtgcatgcat atgcttatgg
     7501 gtctattgag gcccggacga acgcgcattc ggcggcggct tcggcagctt acgcgagcgc
     7561 gcccctctcg ttagatcctg gtcaagccag gttccatccg catgtcaatc tatcgaacac
     7621 tggcggtcag acttcaaatc tttcggatgt tgcatttgcg ggcaacaagg tttttgtggc
     7681 ttggcacgag atgggcgctg catccgaggt ccgcttccgc gcttctacaa acggcggcgc
     7741 atcgttcgcc aactcaccct cgggccaggt gctggccacg attccaaacg gcgacaccct
     7801 tttcagcgtc caggtcgcag cttttgggaa tactgttcac gtgatctact catcgggcgc
     7861 gagcgaagcc acggcgcagg tctcttacag gtcttccatc aacaacggcg tgtccttctc
     7921 cagcccagta atccttgcgg gcggtcctgg cggcagcccc ttccctgaca tcgcgaccga
     7981 cggggctggc aatgtccaag tggttcttga agatcgcgga ggcacgaacg acatccacca
     8041 ccggctctca accgatggcg gactgacctt tggcatcgcc gttaacattt caaacaccgg
     8101 tgacgaatcc attaagccac gtattgccgc taacggggcc aacatcggag tggtctggca
     8161 ggagaatggc tcgggcggca gcgaagtgca gttcatccat tctaccgatg gaggtctgag
     8221 ctggcccggg ccgtcacaga atctctcgaa cagcgcgggt acagactcaa cctctcccga
     8281 catcggttac ggcaactcga ttcaagtggt atgggcggaa ggtttgagtg tcgcgcatcg
     8341 cagttcagct gacctcggtg cgaccttttc ggcgctcgcc aacgtggcta ccgcggcggc
     8401 aggcgaatcc attcgcggcc cgcgcggggc cgcaaacggc ctgctagccg gaatcatttg
     8461 gatgacagcc gactcttcga acgtgattca tggtccattc ctgcgacgct cggaagatgg
     8521 cggggccacg tttgccgcgg cccaagacgt ggcgaacggt ttggcgggtg caggtgttga
     8581 cccggcggcg atcgctgctg ctccatcatt acggattgtc tggtcgcgct cgctctctgg
     8641 caacgccacc gacgcagagg tcctttttgc gcgcgagatt tcgtgctcgg tttactgggc
     8701 caacccggtg aatgggaact ttgcgactgc cgccaactgg agcaccggcg tcgtgcccac
     8761 ctcggcgagc gacgtctgca tacaggtcga cggcgactac accgtcacgt cgagcgccgg
     8821 ccgaacaatc aacagtctgg tagtgggaga ccccgacaat actggctcac agacactcca
     8881 aatctccggc agtacgctaa cggtgctgaa cggcgcctta aactcgagct caggaacgct
     8941 tggtcttgag aacattaccg gcacggtcgc ctccaccctg tcagtacaga acggagtgct
     9001 gaccaatatc ggcacggttg acgtcaatca gggcactggc ggcttgcgca atatcactgc
     9061 cgacctcgtc aacgacggga cggtgaacat caacgccaac acgagcttca ataatggggc
     9121 cggcgtctac accaacaaca gtatattgaa cattgccgcc ggcaggacgc tctcgatcac
     9181 gggcagcaac ttcaacaggc agaccttcaa tcagaacggc ggcacgctca acatcgccgg
     9241 ggccttcaac ctgacgagct tcgtcacctt caacttcaac ggcggcagca tcacaggcat
     9301 ccctgtgatc agtaccggga cgctcaacat cggccccggc tccacgggcg ccgcggagtt
     9361 ctcaatgcga ggggcaggta acacgctctc gggcgacatc gcgcccgcgc agaccgtcaa
     9421 catcaacgcc aacaccacct cccctgtgac gctgacggcg gtcaacagtt tcaccaacgc
     9481 gggcacgatc aacttggaga ccgtagcgtc caccggtccc tcgaacctgc aagtgaatag
     9541 cggggtgctg accaacacgg gcacgatcaa cgtcaagcct ggcacaggcg gcgggcgcag
     9601 catcaccgcc agtttcgtta acgacggcac catcaacctt gacgccaaca cgagcttcaa
     9661 tgatacgaac ggcgtctaca cgaacaacaa catcttgaac attgccgccg ccagcacgct
     9721 gtcgatggcg ggcggcacca tctccaactc tcaaaccttt agacaaaaca gcggcgcgat
     9781 cacaggcggc ggcaacttca acttgaccaa cgccaccttc ttcggcaggg gcaacgtcac
     9841 agccaacctc agcctggtca actcgaacat gaaccccggc gcatcgcccg gcgtcctcaa
     9901 catcacgggc aactacacgc aagactcggc ttccgacctc ttcatagagc tcggcggcac
     9961 gcttccgggc acgggcttcg accaattgaa catcagcggc accgcgacgc tttcggggag
    10021 gctcaacgtc agcgttatca acggccactg tcccgaaggc atctacgagt tcatgacctt
    10081 cggctcgcgc gtgggcgatt tcaccaccaa gaccggtctg acgaccacca cagggcacac
    10141 gttcaccgcc atccccggcg cgaacaatta cgtcctcagc accagcgggc cggcgtgcaa
    10201 cttccggccc gtggcgaacg acgacagcta cagcaccaac gaggacacag tactccgcaa
    10261 gttcgcgtcg gccggcgtgc tcgcaaacga cacggacaac gagaacagcg tcctcacggc
    10321 catactggtg tcggggccgt cccacggcgc gctgacgttc aatgccaacg gctccttcac
    10381 ctacacgccc aatgacgagt tcatcggcac cgacagcttc acttacacgg ccaacgacgg
    10441 aacactagac agcaacgtcg ccacggttac gatcaccgtc aacgccgtca acgacccgcc
    10501 caaagccaac aacgacagcg ccaccgtgga cgaagacagc ggggctacag cgattgacgt
    10561 gctcgcaaac gacagcaccg ccccggacac cggcgagacg ctcaccatca cagcggtcac
    10621 gctcagcgcg cacggcagcg tggcgatcac tggcggcggc accggcgtga cctacacgcc
    10681 caacgccaac ttcagcggcg cggacggctt caactacagc atcagcgacg gcaacagtac
    10741 cgagacggcc catgttagcg tcaccgtcaa tccgctgaac gatgcgcccg atgcgcagga
    10801 cgacaatacg agcgtcactg aagacagtgg cgccaacccg attgatgtgt tggctaatga
    10861 caccttcgcg cccgacgctg gtgagacttt gaccgtgaca gccgcaacgc aagcgaccaa
    10921 cggcaccgtc gcaatcaccg gcggcggcac gggcctgagt tacacaccca atgccaactt
    10981 caatggcagc gatagcttta cttacacgat tagcgacggg aacggtggaa cggatacggc
    11041 aaccgtcaac gtcaacgtta caaccgtcaa tgatccgccc gatgcggttg atgacgcagt
    11101 cactgtggct gaggatagcg gggccatcaa catcagtgtg ctggctaatg acagctctgc
    11161 gccggatacc ggcgagactc tgactgttac tgcggtgacg caaggggcca acggaacggt
    11221 ggccatcacc agtggcggct caggagtgag ctacactccg gccgcccact tcttcggccc
    11281 cgacagcttc acctatacga tcagtgacgg caacggcggc agcgatacgg ccacagtcaa
    11341 cgtcatcgtc acggcagtca atgatctgcc ggttgcactt aacgatagtt acaccactgg
    11401 tgaagactcc atcctgacgg tgaactcagc cggaggcttg cttgccaatg acagtgacgt
    11461 agatagcagc acgctgacgg ccctgctggt gaatggtcca accaacggga ccttgggact
    11521 gaatccggac ggctcgttca gctacacgcc caatcccaac ttctttggca cggacggctt
    11581 cacctaccgg gcccaggacg gacaagccga ttcaaatgtg gcctcagtag taatcactgt
    11641 gaatgcgctt aacgacgcac ccgatgctgt tgaagacgaa gtaactacgg aggaagatac
    11701 agccgttaat attcccctgc ttgccaatga caccgacgcc gacaacgact cgcttgcggt
    11761 gcatagtgtc actcagggta gtaatggggc tgtcgtgaat aaccctgaag gcacggttac
    11821 ctacactcca aacggcaact tcaatggcaa tgacagcttc acctacaccc tatccgacgg
    11881 caatggcggt actgacacca ctaccgtcaa cgtaactgta acgccagtca acgacgcacc
    11941 agccgcagtt gatgatcagg cgaacaccga tgaggacact gcggtacaga tagccgtgcg
    12001 cgccaacgac gccgatgtcg acggtggcga cgcgcttaca gtggtcgcag tggcccaggg
    12061 taccagcggc gcggtcgtga taaatcctga tgggaccgtt tcctacacac ccaatgcgaa
    12121 cttcaacgga tcggacagct ttacctacac catcgaggac gggaatggcg gcagcagcag
    12181 tgcgactgtc aatgtcacta tcgctcccat caacgatcca cccgacgcag tcaatgacac
    12241 agcttccgtg caggaggata gcggggtcaa cgcgattaac gtgctggtca acgattcttt
    12301 tgcacctgac accggcgaga cactgactgt taccgcggtg acgcaaggtg ccagcggcgc
    12361 agtggcaatc accggagccg gcacaggggt tagctacact ccgaatggga atttcaacgg
    12421 cagcgatgcc tttgattaca cgatcagtga cggcagtggc ggcactgaca ctgccacggt
    12481 cactattacg gccaatgccg tcaacgatgc gccagtggct gtgaacgaca gctacagcac
    12541 caatgaagac aacccactcg tggtgggcgc ggcaggtgtg ctctcgaacg atagcgatgt
    12601 cgacggcgat gcgctgacgg ctgccttgat cagcggcccg agcaatggcg cattaatgct
    12661 caacccgaac ggctcattca cctatacacc ggcagccaac ttctttggca cggacagctt
    12721 tacctacaaa gtcggcgatg gcgcgctcga ctcgaacacg gccaccgtca ccatcaccat
    12781 caatgcggtc aacgatcctc ccgatgcgtt gaacgattca gccactacga accagaacac
    12841 ggcgatagcc attagcgtgc tcgccaacga cacggacgtt gagggccaca cacttaccgt
    12901 gactgctgtc acgcagggcg ctaacggtgg ggtcatcatc aatcctgacg gcaccgtcac
    12961 ctacacgccc aacgccggct tctccggcgc cgactcgttc acctatacga tcagtgacgg
    13021 ctttggcggc agtgacactt caaccgtcaa cgtcaacgtc aatccctctg ggcaatcagc
    13081 attaagcagg ttcgtcgcct ttagccgtga gatgacctgg ctcctcaacg gcacgaaagt
    13141 cttcaccggc gacgtgggcg ccaataccag cctcagtgtc ggcccgtcgc cctatgacga
    13201 cgatgaggac cgggaccgga gacgtgaggt gcgcataggc gaagaggtga agatgctgca
    13261 atcatcttcg aaggtggtgg gggacacgat ctggctgcgg cacaactcgc aggtcttcgg
    13321 cgttcactac aacgagctga tcaacaagca tgggactgtt ctcggcctaa gtcagcaacc
    13381 gctgccattg ccgttgctga caatgcctga gctgccgctg atcattccgg gcactcagga
    13441 cattgaggtc aagaagaaca agacgcacac gatcgccccg ggccgctatc gcaagataac
    13501 cgtccagcac ggcggcacgc tgattctgac cggcggtatc taccacctct ccactctgga
    13561 cgtcaggaca agtgcgaaag ttgtcttccg cggcacgtca gaggtccgca ttaagaatga
    13621 gatggacact gatgcgcgaa gctacatcgg gccggattcc tcggtatcgg gtctggatgc
    13681 ttcggacatc atcttctacg tggcgggagg cgacgataaa ggccggcgtc acgaagatga
    13741 cctcgagccc ggttaccggg aagaagaggt cagcccgacg gtggtgcaga taggtgtgga
    13801 gaacactatc aaggccaaca tctatgcacc caacggtacg gtgtggatca agaaaggagg
    13861 caaagccacc ggcgccttta tcggcaagcg ggcacgcatt ggggtaaggg ttgaactcac
    13921 cctggatagc gcgttctagc accttgacag tcgaagagcg cggagcgcac gacagcataa
    13981 agcctgggac acaagcccag gagtcgaagt cgacaaacag atggtgagcc cgcggaggag
    14041 tctgtcgaaa aaaaccgcgt agcgtgaaat gtttatagaa aggcagtcgc aattaagacc
    14101 aattagctcc tttaggagcg caacaattgt ctttcgccca taaatggcct cctgagatca
    14161 atgggcttga gctttctata aacattgcat ccctacggga tgcgcagact gaccttgatg
    14221 ataagtcttg acgcttgacc gcccacttcg ctagattcgc gctaacgctg attctgatgc
    14281 gacaacgctg ccccatcctt ttgagcctgg ctctgatctc gggctttctc ttcccgtcaa
    14341 taattctcgc ccacacgcgc tcgccatcca gccgttggcc cgtggttgcg gcgcaggatg
    14401 acaaggatgt tcgcgcgctc gtccgtgatc accgggtcga gcgctcgctg gaaagtaagc
    14461 agcttcacgt ttatcgcatt cctgcggctg tcggtcattt ccttagcatt gctgtcgagc
    14521 agccggacac agatgtcgtg gtggcgttgt tcgcccctga cggcgccaaa gtgttccaaa
    14581 cgacctcagc ggatttccgt ttaaatcgaa cccgagtcta cgccatagct aatcaggtgg
    14641 gcgattaccg aatggaggtc cgcgcgttcg atcagggtgc accggcggga cgttactcaa
    14701 taaccctcga cgcactccgt caagctactg ccacagacaa aagccgcgta gcagcgcggg
    14761 ggtttcttga aaaggccaac agtgagtggc gatggggcaa tcctgaaaca tttcggaagg
    14821 cggtcgagag ttatgtcgag gcgttggcgc tttggcgcgc ggtggaagac aaaaacggag
    14881 aagcagacac gctggctttt ttgagccacg cttaccggaa tctcggcgat tatcctaatg
    14941 ccgtgcaatc cgccgaggct gctttacacg tgtcgaaagc tattggcgac cacacaggtg
    15001 aggcttgggc gactgcgctt ctggccgaag cctttgccgg catgggacaa gtggataaac
    15061 agctggaata cttttataag actctgcaca tccatcacaa tgcgggaaac aagcgcggag
    15121 aggcttccgc actcttaggc cttggtcaat atcacctggg gtcagcggat tatcaaaaag
    15181 cgctggaatt catcgctcaa agtctttcct taagccgttc aattaataat cggccgaggg
    15241 aagcgcgcgc tcttttcaat ctcggtttag cctactggct tatcggcgat tatcaggaat
    15301 ctctcgaggc ttaccgccaa tgcctccctt attaccaagc cgtcggcgat gtggtccaag
    15361 ccatgagcat cctcgataac atgggccttg tttactacgc gcttggcgaa tatcagaagg
    15421 cgttggattg ttacgcgcaa acactcgcag accgccgctc gagaaatcaa cattcggcgg
    15481 tcgccgacac cttaacgggc atcggcaccg tgtatgccgc catgggccaa aatcagcagg
    15541 cccttgagaa tcttaaccag gccctgacga tctaccggga ggtcggcaat cgtaccggag
    15601 ttccttacgc cctgcgaaat attgccagcg tttatatctc gctgaaagac ccagggaagg
    15661 cgctggacta cttcaatgaa gcgcttcccg aggatcgtgc tttaagagat caaccagcgg
    15721 aaattaaggc cctctccggc ctcgccatgg ctcatcgcga tctgggaaac ctcaacaaag
    15781 ctcgcactta cattgaggag gcgctggata tcgttgagtc tctgcgaagc cgcctgacca
    15841 gccaggaatt gcgcgctgcg ttcttcgctt caaagtggtc ctactatcag ttttacattg
    15901 atcttctcat gcggctcaac cagcagaagc ctgacgcgaa gtttgatgcg gcggcgctcc
    15961 aggccagtga gcgggcccgc gcccgcagtc tgctggacct cctcgccgaa gctaaagttg
    16021 atctctctga gggcatcgac ccggcgctga aacagaaaga gaaggaaatc cagggacgga
    16081 tcacgcgtgc gaatggccag ctgattcagg cactcagcgc tagtccggtc aacaaagatc
    16141 tggttgcgca actcaatgaa gagctgaaac agaccgaaaa ctcgcgcgag caacttgaag
    16201 tacagattag gaaggcgcat ccgaaatacg ccgaactcaa atatccgaca ccgctcaaac
    16261 tggaagcgat tcaagatctg cttgatgagc atacagcctt gcttgaatac agcctcggac
    16321 aagacaggtc attcctcttc gtggtgagca agcagggctt gaagagttat gccctgccgc
    16381 cggcggcgga gatcaacaag ttggtccagg aggtccgctc caccgtggag cagcccggcc
    16441 gcagagagtt tggcagcttc gtgagtcggt cacgcaaact atatgacgtg ctcatcgccc
    16501 ccgccaccaa cgagctcaaa gagaagcgga acctgctgat tgccccggat ggcgccctct
    16561 actacttgcc atttgaagcg ctgttaaccg gactccccca gagcgaacag ggcgagatgt
    16621 cctacctgct aaagcgttgg ggagtaagtt atgtgccttc agccagcgtg ctcgcaaacc
    16681 ttcgtcagag ccaaaagcag gcggaaaaga agcccgggcg gagggagttt gtggcctttg
    16741 ctgatccgg
//
LOCUS       DATDBY010000258         3690 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1639302, whole genome shotgun sequence.
ACCESSION   DATDBY010000258 DATDBY010000000
VERSION     DATDBY010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3690
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1639302"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..457
                     /locus_tag="VIT19_04860"
     CDS             <1..457
                     /locus_tag="VIT19_04860"
                     /inference="COORDINATES: protein motif:HMM:NF019350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEY5838346.1"
                     /translation="PLETTYETEIACKDGTRKPVEVISRMIYRNGEPAGVQGTVRDIS
                     ERKRAQRALQTYSRRLVNTQEAERESIVRELHDNIGQSLKAISLNLKAIQTSGEVNES
                     ARSRLGETIDVLEGVLRRVRELSSELRPANQDKPESVKDGLLYQPAVNI"
     gene            complement(413..1276)
                     /locus_tag="VIT19_04865"
     CDS             complement(413..1276)
                     /locus_tag="VIT19_04865"
                     /inference="COORDINATES: protein motif:HMM:NF014627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEY5838347.1"
                     /translation="MKKFGRRLLNFALIVAGIFSAAFGLKGFLLSSRFIDGGVTGVSM
                     LLSDIFHAPLSILILVINLPFVAIGYRQIGRAFAIKSVLSIAGLSLVLAFVKFPDITP
                     DKLLTAVFGGFFIGAGIGLAIRGGAVLDGTEIAALLVSRTSNLLNVGDVILILNIFIF
                     LTAAFFLGVDSALYSILTYAAASKTIDFLLHGIEEYRGVTIVSVKNQEIKYLIINQLH
                     RGVTVYQSPGGVGSTGATEEEREILYCVVTRLEISRLKHAVTEIDPSAFIATHALSDV
                     HGGLVKKAIFH"
     gene            1894..3546
                     /locus_tag="VIT19_04870"
     CDS             1894..3546
                     /locus_tag="VIT19_04870"
                     /inference="COORDINATES: protein motif:HMM:NF028240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative porin"
                     /protein_id="HEY5838348.1"
                     /translation="MFRMRPLSIPGMLALLVLLVVPVSHYAQAEVARTGNDANVPPAA
                     RPDSDIAHKLELLEEQMRAQNGRIDQLTALVAEQQRLINQLVAARVSNPTTGAGDAAP
                     NTVASATEPAVSTTTDAPAQNPSEDRIKKLEERVTKFGPFRFSGDFRLRFDGTFRRAE
                     PNPPAGFAPLTHAQNVRARYRLRFNFDTDINPKLSFHGQLSTGNLSSITSGDQDFAAL
                     GIKHPFMISEAWIDYHPTKNLQLMAGRLPSVFADNSRFFFDDDTRFNGFNEKYVFNFE
                     NNGLQVSSLELRAGQYILSNPNVAIVTPGSPLAQAGAVIGSTGRSANLFDQGFLVNQK
                     YNDRWSSQWGGNIQLYRNPNQIQLASTANAVALIVQNGIGIALSGPVAGTGNATTTPG
                     GAIYTAPSFQIARATYRLNWAGFTKGGHDYPVTFNIQASRNVGIGLPERDALMAALQI
                     GPSRPTKRGDMAFYYVFYIKGANAMISQFTDDDVGTGSGVNIRTHHFRFDYAFSRKVS
                     WQSLFYIQNELRNSGQFPAFFVPLNAFTPRQYRWQEQLVFTF"
BASE COUNT          874 a         1071 c         1031 g          714 t
ORIGIN      
        1 accgctcgag acgacttacg aaacagagat tgcgtgcaaa gatggaaccc gcaagccggt
       61 cgaagtcatc agccgaatga tctaccggaa cggcgagccg gcgggcgtgc agggcacggt
      121 gcgcgacatc agcgaaagaa aacgcgccca gcgcgcttta cagacgtatt cccgccgact
      181 ggttaacacg caggaggccg aacgcgaaag catcgtgcgc gaactgcacg acaacatcgg
      241 ccaatcactg aaggccatca gcctcaacct aaaagcgata cagacatccg gtgaagtgaa
      301 cgagtcagcc cgctcgcgtc tgggcgaaac catcgacgta cttgaggggg ttctgcgtcg
      361 ggtgcgtgaa ttgtcctctg aattgcgccc cgcaaaccag gacaagccgg aatcagtgaa
      421 agatggcctt ctttaccaac ccgccgtgaa catctgacag agcatgtgtg gcaatgaacg
      481 cagacggatc gatttctgtt acggcatgct tgagtcttga gatctccagt cgcgttacga
      541 cgcaatagag aatctcgcgt tcttcttctg tcgcgcccgt actacccact ccgccgggac
      601 tctggtaaac ggtaacgccg cgatgcagtt ggttaatgat caagtactta atttcctggt
      661 tctttaccga aacgatggta acgccccggt attcctcgat gccgtgaagc agaaaatcta
      721 tcgtcttcga agccgcggcg taagtcagga tcgagtacaa ggctgagtcg acaccgagaa
      781 aaaaagcggc cgtcaagaat atgaagatgt tgaggatgag aatgacatct ccaacattca
      841 gcaggttgct tgtccggctc acgagcagcg cggcgatctc agttccatcc aaaaccgctc
      901 cgccacggat ggccagcccg atgccggcgc cgataaagaa acctccaaag acagccgtca
      961 aaagtttatc cggcgtgatg tcgggaaact tgacgaacgc caggaccagc gacaggccgg
     1021 cgatcgacag gacgcttttg atggcgaacg cgcgtccgat ttggcgataa ccgatagcga
     1081 cgaagggcag gttaatcacc aggatgagga tcgacagggg cgcatgaaaa atatccgaca
     1141 gcagcatcga aacaccggtc acgccaccgt cgatgaaacg gctcgacaaa agaaagcctt
     1201 tcagcccgaa tgcggccgaa aagatccccg ctacgatcag cgcaaagttc agtaggcgcc
     1261 tgccaaactt cttcattagc cttgaggata acggggtcag cgcgaggtct caagcgtcga
     1321 actgactggc ccgtccgacc acatccgaat ttttggcagc gagccgaccc ctggttcggg
     1381 taacacgctg aaaagtacgg ggcattttgt gaagaagcgc acgtctcgag gcggggcatt
     1441 agcccgacgt catggagggc tctaaattcg cgacttaatg agccctcgct aacggtcggg
     1501 ctagcgcccc gatagcgcca aggattaacc caagtacccg ctggaaacga aggttgacgc
     1561 gggcgggaat tcaactacaa tacacggcac ttggagcgag gctgaatgct ttgctcccgc
     1621 gcgaatacgc gcgaggaagc ggcgatgagt gggagcatcg ccgctttcgt tttaaatgct
     1681 cctttatgcg gctgatcctt ctcgatccgg tcgcatccac cacccatgcg ggctgcccgc
     1741 gcgggggccc cggtccgctc ccggtactga caccgcttac caccgttaac gtcgagttaa
     1801 cttccgcttc aaacacttgt aacgcgaaat caataacctg taaggtgcgt tcgtaaaaat
     1861 cttgcctccc tcggaagaat ggagcaacaa atcatgttta gaatgcggcc tctttccatc
     1921 cccggcatgc tggcgctgct ggttctttta gttgtgccgg tttcgcacta cgcgcaagcg
     1981 gaagtcgcgc gtaccggcaa cgacgcgaat gttccgccgg cagccaggcc cgactcggat
     2041 atcgcgcaca agctggagct gctggaagaa caaatgcgcg cgcaaaacgg ccgcatcgat
     2101 cagctgactg cgctggttgc tgagcagcag cgactgatta atcaactggt cgccgcgcga
     2161 gtctcgaacc caaccacagg tgccggcgat gcagcgccga acacagtcgc ttcggcgact
     2221 gaacccgccg tctcgacgac caccgatgcg ccagcccaaa atccgtccga agatcgaatc
     2281 aagaaactcg aagagcgagt gacaaagttt ggcccgttcc gattcagcgg tgattttcgt
     2341 ttgcgattcg acggcacgtt ccgccgggcc gagcccaatc cgccggcggg ctttgcgccg
     2401 ctgacgcatg cgcagaatgt gcgcgcgcgt tatcgactgc gattcaactt tgataccgac
     2461 atcaatccga aactgagttt ccatggacag ctatccaccg gaaatttgag cagcatcact
     2521 agtggcgatc aggacttcgc ggcactcggg atcaagcatc cgttcatgat cagcgaagcg
     2581 tggattgact atcacccgac gaagaacctt cagttgatgg cgggccggtt gccgagtgtt
     2641 tttgccgaca actcccgttt cttttttgac gacgacacgc gcttcaacgg cttcaacgaa
     2701 aagtacgtgt tcaactttga gaacaacggt ctgcaggttt cgagtttgga attgcgcgcc
     2761 gggcaataca tcctgagcaa tccgaacgtc gcgattgtca ctcccggaag tccgctcgcg
     2821 caggcgggcg cagtcatcgg atcgaccggc cgcagcgcga accttttcga tcagggattc
     2881 ctggttaatc agaaatacaa cgatcgttgg agctcgcagt ggggcggtaa cattcagctc
     2941 tatcgcaatc ccaaccagat tcaactggca tccaccgcaa acgccgtcgc gttaatcgtg
     3001 cagaacggaa tcggcattgc gctgtcagga ccggtggcgg gaacgggcaa tgccacgacc
     3061 acgcccgggg gcgctatcta cacggctcca agtttccaaa tcgcgcgtgc aacctatcgg
     3121 ctgaactggg caggctttac caagggcggc cacgactatc ctgtaacctt caacatccag
     3181 gcgtcacgaa acgtgggcat cggcctgcct gaacgcgacg cgttgatggc ggcgctgcaa
     3241 atcggcccca gccgcccgac caagcgtggc gacatggcgt tctactacgt cttctacatc
     3301 aagggcgcaa acgcgatgat ctcgcagttc accgatgacg acgtaggcac gggcagcggc
     3361 gtgaacatcc gcacgcatca cttccggttt gactatgcat tcagtcgcaa ggtgtcctgg
     3421 caaagtctgt tctacattca gaacgagctg cgcaacagcg gacagttccc ggccttcttc
     3481 gtgccgttga acgccttcac gccgcgacaa tatcgctggc aggagcaact agtgtttact
     3541 ttctgactac ggttgaagtt gaaccgcgtc ggtgatataa ggcgcgacag cgaacggccc
     3601 gacgagttcg cgagcacgct tcagtctcaa ttttggagct gtgccttgcg ctaatcttcg
     3661 aggatcaggc gcgagactcg acggcggcgc
//
LOCUS       DATDBY010000259         2345 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_270872, whole genome shotgun sequence.
ACCESSION   DATDBY010000259 DATDBY010000000
VERSION     DATDBY010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_270872"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(141..803)
                     /gene="rpe"
                     /locus_tag="VIT19_04875"
     CDS             complement(141..803)
                     /gene="rpe"
                     /locus_tag="VIT19_04875"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEY5838349.1"
                     /translation="MVEIAPSILSADFARLAEEIEAVERAGASLLHVDVMDGRFVPNI
                     TIGLPVVKAISRATRLPLDAHLMIVEPGQYAEQFVAAGAQMVSVHIEADPHAHRTLSA
                     IRAAGGQAGIAINPGTSLSAVEEVLKFADYVLLMSVNPGFGGQKFIPESLDKLRRLRS
                     MIDERGLPTRIEIDGGIDRDNIAEVAAAGAEIIVSGSAIFSAKDPGVALRELREATVL
                     WV"
     gene            complement(876..1520)
                     /locus_tag="VIT19_04880"
     CDS             complement(876..1520)
                     /locus_tag="VIT19_04880"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HEY5838350.1"
                     /translation="MAPTVRQILLILKRIVIVIGIAVAFSLGLAGAIYLSLRSSETRV
                     PNVIGQDEKSAEATISDAGLNFRVRARRATSEAKPDTVLIQLPYAGEIVKVGQTVAVD
                     ISRPTANGESAAPANTNANTSTENKNENKNTNSSATATPTPRRKPANKNDNANANAGA
                     NRNRNGNANRVTPNVNANRQATPANTGSNTNSGNTTRPPRNSNGNRRPVAAPTP"
     gene            complement(1774..>2345)
                     /locus_tag="VIT19_04885"
     CDS             complement(1774..>2345)
                     /locus_tag="VIT19_04885"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013362.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEY5838351.1"
                     /translation="TAAPGSKATHIAALAPSATIVAGDFHPHRVETMRRLAVQQDAHI
                     RVLVHDATKPLPFTDESFDRVLLDAPCSGTGTLRRNPEIRYRLRPDDISELAEQQKQM
                     LACAAAVVRPGGRLLYSTCSVEPEENEQVIDQFASHHPGFRAINPAGAISSFIPHPSS
                     LLSRPVSLRLWPHRQGSDGFFIAAYERAG"
BASE COUNT          485 a          654 c          699 g          507 t
ORIGIN      
        1 gcggcgatga gcagaagtga tgaaaagact ttcatcgaat tacggccgcg gttaaaaaca
       61 agaaacattg ggaaacctcc aaaaacaaaa cgggtcattc tagactgact tcctggggtt
      121 ggctaatcgc tgacgactcg ctaaacccag agcacggtcg cttcacgcaa ttcgcgaagg
      181 gcgacgccgg gatcctttgc cgagaaaatt gccgagcctg agacgatgat ttcagctccg
      241 gccgcggcca cttcagcgat gttatcgcgg tcaatgccgc cgtcgatttc gatccgcgtg
      301 ggcaagcccc gctcgtcgat catgctgcgc aaacgcctca atttatccaa cgattccgga
      361 ataaactttt gtccgccaaa acccgggtta accgacatca acagcacgta atccgcgaat
      421 ttgaggactt cttccaccgc cgaaagcgat gtgcccgggt tgattgcgat gccggcctgt
      481 ccgcccgcgg cccgaatggc cgaaagcgtc cggtgcgcgt gcgggtcggc ttcgatatgg
      541 actgaaacca tttgcgcgcc cgcggcaacg aactgttcgg cgtactggcc cggctcgaca
      601 atcatcagat gcgcgtcgag gggcagccgg gttgcacgcg aaatggcttt taccaccggt
      661 aaaccgatgg tgatgttggg cacaaaccgg ccgtccatca cgtccacgtg cagcagggaa
      721 gcgccggcgc gctcgactgc ctcaatttct tccgccagcc gggcaaaatc cgccgacagg
      781 attgaaggag cgatttcgac catcgatgtg tgatgcgaag tcataggatc gtatgcggac
      841 cgttgagttt gccgctcgct cggtcacggc tctaattagg gcgtcggcgc cgcaacagga
      901 cgccgattac cgtttgagtt gcgcggcggc cgggtcgtgt ttccactgtt cgtgttgctg
      961 ccggtgtttg ccggagtcgc ctggcggttc gcgttcacat tcggggtgac ccgattcgcg
     1021 ttgccgttac gattccgatt cgccccggcg ttcgcattgg cgttgtcgtt cttattcgcc
     1081 ggtttcctcc gcggcgtcgg tgtcgccgtt gctgacgagt tagtgttctt attctcgttc
     1141 ttgttctcgg ttgacgtgtt tgcgttcgta ttagccggcg cggctgattc gccgtttgcc
     1201 gtcgggcgac ttatgtccac ggccacggtc tgaccaactt tcacgatttc gcccgcgtac
     1261 ggcagttgga taagaacggt gtcgggcttc gcttccgagg tggcgcgccg ggcccgcacg
     1321 cgaaagttca agccggcatc gctgattgtg gcttccgctg atttttcgtc ttgaccaatt
     1381 acgttcggga cgcgcgtttc agaactgcgg agggacagat agatcgcacc tgccaagccg
     1441 agcgaaaagg cgacggcgat gccgatcact attacgattc gctttaggat taagaggatt
     1501 tgccgaacgg ttggagccat caatgttgcc aaagcccgaa gccggatgaa gcgcgaagtc
     1561 taacatgtac cgcagcggca aggatagcca ttgtcgcatc gtaatggttg agtctgcttc
     1621 tcattcacac cgcggcttta gcccggtgga gagttgcggg gggcaaggca aaccgtttaa
     1681 acggtttcgg tacgcgagcg accagcctga tcgccgcgct aaagcgacgg cgagactgaa
     1741 agatctctca aatcgaaccg ttacgttgct cgctcaacct gcccgttcgt aagccgcaat
     1801 aaagaacccg tcagagcctt gccgatgtgg ccacaaacgc agggatacag gccgagagag
     1861 caaggatgaa ggatgaggga tgaaggatga aatagcgccg gccggattga ttgccctgaa
     1921 acctgggtga tgggaagcaa actgatcaat gacttgttca ttctcttccg gttcaacgga
     1981 acacgttgag tacagcaagc ggcccccggg gcggacgacg gcggcagcac acgcaagcat
     2041 ttgtttctgt tgctcagcaa gctcgctgat gtcgtcaggc cttagccgat atcgaatctc
     2101 cggatttcgc cgtaacgtcc ctgtgccgga acatggcgca tcgagcagaa cgcgatcaaa
     2161 agattcgtcg gtaaagggaa gcggcttcgt cgcatcgtga accagcaccc taatatgcgc
     2221 atcctgttgg actgcaagcc gccgcattgt ttcgacgcga tgggggtgaa agtcgccggc
     2281 aacgatcgtc gccgacggcg cgagagccgc gatatgcgtt gctttgcttc cgggtgcagc
     2341 cgtca
//
LOCUS       DATDBY010000260         2157 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2753603, whole genome shotgun sequence.
ACCESSION   DATDBY010000260 DATDBY010000000
VERSION     DATDBY010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2753603"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            356..1417
                     /gene="hemH"
                     /locus_tag="VIT19_04890"
     CDS             356..1417
                     /gene="hemH"
                     /locus_tag="VIT19_04890"
                     /inference="COORDINATES: protein motif:HMM:TIGR00109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEY5838352.1"
                     /translation="MTRTGVLLTNIGTPDEPTPEALARYLRQFLMDEYVLDMPFIKRW
                     LLVNRVIVPRRKHYSAEHYQKIQMAEGSPLLVYTQRFAAGLASELSEDYVVEIGMRYG
                     NPSIQAGLANLKTAGVDRIVAVPLYPQYTQSSFQTAVVETRKQAKKLGLTDKLRFVDP
                     FYVDPEFIESWAHIVREHFETHSADHLVFSYHGVPVRHIQQVDTAGYCQNNAACCAQI
                     GSANQNCYRAQCHATSRAVASNLSLKPDEFTTCFQSQFGKDEWIGPSFENLLVELPKR
                     GIKSIAVACPSFVADCLETLEEIGIRGREEFIEAGGEELSLIPCVNDHPLWVKAAANL
                     IRATVEQSAAAGAAAASAH"
     gene            complement(1338..>2157)
                     /locus_tag="VIT19_04895"
     CDS             complement(1338..>2157)
                     /locus_tag="VIT19_04895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838353.1"
                     /translation="YSPPEQMQDQGTSPQSDIYALGATLYHLLTGVKPPDAMVRTRAI
                     AKAEADPLRPANELHAAVGPEISAILLRAMELNPDRRFTDANEFREALKRLGRENMRA
                     LSNWSEQGASDGAGPPHINVTVVKQPTDPFDSYSILKPAEMDWLIPNPSRRPFVLIAL
                     IGLLLVGGVFAFSDTSRWPDVSKAAADYVRAKRKGGGVVTSETKKQPANSRTNNQVNL
                     RSSERAGYTSRGEQRNLKPNGKATTKRIASARSRLLRPPPPIVPPLRELNLPQP"
BASE COUNT          464 a          604 c          597 g          492 t
ORIGIN      
        1 ctaacgcagc gcgtgctctc tgtttgcgcg tggacgcatt ttgcatgaaa gaagcctcct
       61 gtgagtttgg tgcgggtcga acttcgcacg ggtaatatca ctgaaaagtg gatgaggcaa
      121 gcgctttagg agtgaattac aacgctgtgg tcaaaggatt tgtttcgttt cgccaaatcg
      181 tttacacgaa aatctcagtg ggaagttgcc gcggcacatc gtcgcataga tacatcttca
      241 aggtttagcg attcagaccc ggcagtcttt accttcaaag atctaaataa atgtccgcac
      301 gttagctttc cgcacccgac tagtgcgaga attggcgctc gttttcatta acttcatgac
      361 tcgcaccggc gttctactca ctaacattgg cacccccgac gaaccgactc cggaggcgtt
      421 ggcccgctac ctgcgccaat tcctgatgga cgagtacgtg ctcgacatgc cgttcatcaa
      481 gcgctggctg ctggtgaatc gagtcatcgt tccgcggcgc aagcattact cggccgaaca
      541 ttatcagaag attcagatgg cagaaggctc gccgttgctg gtttacacgc agagatttgc
      601 ggccggcctc gccagcgaat tgtcagaaga ctacgtggtt gaaattggaa tgcgttacgg
      661 caatccgtcg atccaggccg gtttagctaa tctgaaaacg gccggcgtcg atcgcatcgt
      721 ggcggttccg ctctatccgc aatacacgca gtcgagtttc caaacggcgg tggtcgaaac
      781 caggaaacaa gcgaagaagc tcgggctaac cgacaagctg agatttgtcg atccgttcta
      841 cgtcgatccg gaattcatcg aatcgtgggc acacattgtc agagaacatt tcgagacaca
      901 ctcagccgat caccttgtgt tcagctatca cggcgtccct gttcgccata tccagcaagt
      961 agacaccgcc ggttactgcc aaaacaacgc tgcgtgttgc gcgcaaatcg gttcagcaaa
     1021 tcagaattgt tatcgcgcgc aatgccacgc gacttcgcgc gccgtcgcgt caaacctcag
     1081 cctgaaaccg gacgagttca cgacctgctt tcaatcgcaa ttcggcaaag acgaatggat
     1141 cggaccttcg ttcgagaacc ttctggttga gttgccgaag cgcggcatta agtcgattgc
     1201 cgtcgcctgc ccttcgttcg tggcggattg tcttgagact ctggaggaaa ttggaattcg
     1261 cggacgtgaa gaatttattg aagcgggcgg cgaagagctc tccctgattc cctgcgtcaa
     1321 cgatcatcca ctttgggtta aggctgcggc aaatttaatt cgcgcaacgg tggaacaatc
     1381 ggcggcggcg ggcgcagcag ccgcgagcgc gcactagcaa tccgtttggt cgtcgctttt
     1441 ccgttcggct ttagatttcg ctgctcgccc cgtgaggtat agcccgcgcg ttctgagctg
     1501 cgaagattca cctgattatt cgtgcgcgag tttgccggct gcttcttagt ctcgctggtg
     1561 acgacgccac cgcctttgcg tttagctctc acataatcag cggcagcttt cgaaacgtcg
     1621 ggccagcggc tcgtgtctga gaacgcaaag acaccgccga ccaacagcaa accgataagc
     1681 gcaatgagca caaacggacg gcggctcggg ttcggtatca accaatccat ttcggccggc
     1741 ttcaagatcg agtaactatc aaaaggatcg gtcggttgct taacaacggt gacgttgatg
     1801 tggggcggac cggcaccatc gctggcgccc tgctcgctcc agtttgagag ggcccgcatg
     1861 ttttcgcgcc caagtcgttt cagcgcctcg cgaaattcat tcgcatctgt gaatcgccga
     1921 tcaggattca actccatcgc cctcagcagg attgccgaga tctcgggccc gaccgcggcg
     1981 tggagctcgt ttgccggccg caacggatcg gcctcggcct ttgcaattgc acgcgtgcgg
     2041 accatcgcat cgggcggctt caccccggtt agcaagtgat agagcgtcgc gcccagcgcg
     2101 tagatgtcgc tttggggaga cgtgccttga tcctgcatct gctcaggcgg cgagtag
//
LOCUS       DATDBY010000261         2032 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_421553, whole genome shotgun sequence.
ACCESSION   DATDBY010000261 DATDBY010000000
VERSION     DATDBY010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421553"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2032
                     /gene="purL"
                     /locus_tag="VIT19_04900"
     CDS             <1..>2032
                     /gene="purL"
                     /locus_tag="VIT19_04900"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HEY5838354.1"
                     /translation="LPTQGERVIVPPGENAGVVDVGDGWCAAFKIESHNHPSFIEPFQ
                     GAATGVGGILRDIFTMGARPIAALNSLRFGSLDDPKNGQRNRSLLAGVVAGIAHYGNA
                     FGVPTIGGEVAFDDAYALNPLVNAFALGLVRKDQIFFGKATGVGNPVLYVGAKTGRDG
                     IHGATMASAEFDEEALEKRPTVQVGDPFLEKLLLEACLEAMRSGAIAGIQDMGAAGLT
                     CSTCEMAARAGTGIEIDLSLVPQRETGMTAYEMLLSESQERMLIVAHKGRAKEVVEIF
                     AKWDLDAVVIGHVHNDGRMRVKHDGEIVCDVPVMALTDEAPIYERPMKAVSGQSSVVS
                     STESVQVAQANNGQLTTDDGQDFNHVLLRLLSSPNLSSKEWVYRQYDHMVRTNTVVLP
                     GADAAVVRIKETRKALAIALDGNGRYCAANPREGAKLAVAEAARNVVCVGAKPIAVTN
                     CLNFASPERPEVMWSFSEVIDGIAEACRAFDTPVVSGNVSFYNETEGRGILPTPVIGM
                     LGLIEDVKRVIQPGFKKEGDIIALLGVTEDDLSTSEYATHGGNPTVREGAQEARIPVL
                     DLQRELAVQAACLRAAEAGLLRSAHDCSEGGLAVALAESCFSSLNRDAIGADISLESE
                     ETSLQPQASSLLFSESPSRIIISFAESARSEIEAIAKDTGSPITILGTVGGDR"
BASE COUNT          421 a          587 c          613 g          411 t
ORIGIN      
        1 ctgccgacgc aaggcgagcg cgtcatcgtg ccgcccggcg aaaacgccgg cgtggtcgat
       61 gtcggcgacg gctggtgcgc cgcgttcaag attgaatcgc acaatcaccc ttcgttcatc
      121 gagccatttc agggggctgc caccggcgta ggcggaatcc tgcgcgacat cttcacgatg
      181 ggcgcgcggc cgatcgccgc cctaaacagt ctgcggtttg gatcgctgga tgatccgaag
      241 aatggtcaac gcaatcgttc cctgctcgcc ggcgtggtgg cgggcatcgc gcattacggc
      301 aacgccttcg gtgtcccgac cattggcggc gaagtcgctt tcgacgatgc ttatgcactg
      361 aacccgctcg tgaatgcgtt cgcgctcggc ctggtgcgga aagatcagat cttcttcggc
      421 aaagccaccg gtgtcggcaa tcccgtcctg tacgtcggcg cgaaaaccgg acgcgatgga
      481 attcacggcg cgaccatggc ttccgcggaa ttcgatgaag aggctttgga aaaacgtccg
      541 acggttcagg ttggtgatcc cttcctggaa aagctcctgc tcgaagcctg tctcgaagca
      601 atgcgcagcg gcgcgattgc cggcattcag gacatgggcg cggcgggcct gacttgctcg
      661 acatgcgaga tggccgcgcg cgcaggcact ggtatcgaaa tcgatctatc gctcgtcccg
      721 caacgcgaaa cgggcatgac ggcttacgag atgcttctgt cggaatcgca ggagcgcatg
      781 ctgatcgttg cccacaaagg ccgtgcaaaa gaggtggtcg agattttcgc gaagtgggac
      841 cttgatgctg tggtcattgg acacgtccac aatgacggcc gcatgcgcgt caagcatgat
      901 ggcgaaattg tttgtgacgt gccggtaatg gctttgacgg atgaagcgcc gatctatgag
      961 cgtccaatga aagctgtcag tggtcagtcg tcagtggtca gtagtacaga atcagttcaa
     1021 gtcgctcaag cgaacaacgg acaactgacg acggacgacg gacaggactt caaccacgtt
     1081 ctgcttagac ttctctcctc acccaatctg agttccaaag aatgggtcta tcgccagtac
     1141 gatcacatgg tgcggactaa cacggtcgtg cttcccgggg cggatgcagc cgtagtgcgg
     1201 atcaaagaaa cgcgtaaggc tctggccatt gccctcgacg gaaacggccg ttactgcgcc
     1261 gcgaatccgc gcgaaggggc gaaactcgcg gtcgccgaag ccgcgcgcaa cgtcgtctgt
     1321 gtaggcgcca aaccgatagc ggtgacgaat tgtctgaatt tcgcttcgcc ggaacggcct
     1381 gaagtcatgt ggtcgttttc cgaagtcatt gatgggatcg ctgaagcgtg tcgcgctttt
     1441 gacacgccgg tcgtgtccgg caatgtgtcg ttctacaacg aaactgaagg tcgcggcatt
     1501 ctaccaacgc ccgtaatcgg aatgcttggg ctgatcgaag acgtgaagcg tgtgattcag
     1561 cccggcttca agaaggaagg cgacattatc gcgctgctcg gggtgacaga ggacgatctt
     1621 tccacgagcg agtacgccac ccacggcgga aacccgaccg ttagggaggg tgcacaggag
     1681 gcgcgcatac cggtactcga tcttcagcgc gaactcgcgg ttcaagccgc ttgcctgcgc
     1741 gccgccgaag ccggcctgct tcgttccgcc catgattgtt ccgaaggcgg tttagccgtc
     1801 gcgctagccg aaagctgctt ctcttcactg aaccgagatg cgatcggtgc tgatatcagt
     1861 ctcgaatctg aagagaccag cctccagccc caagcctcca gcctcctctt tagcgaatct
     1921 ccctctcgca tcatcatcag ctttgccgaa tcagcgcgca gtgaaatcga agccatcgcg
     1981 aaggacacgg gttctcccat caccattctc ggcactgtcg gaggggatcg tt
//
LOCUS       DATDBY010000262         8938 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1446744, whole genome shotgun sequence.
ACCESSION   DATDBY010000262 DATDBY010000000
VERSION     DATDBY010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8938
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1446744"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..553)
                     /locus_tag="VIT19_04905"
     CDS             complement(170..553)
                     /locus_tag="VIT19_04905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838355.1"
                     /translation="MKRSESYRKTRGFVILVALLALAALPLISSARTAATSVNIVNDS
                     SREIQNVYISHVNANDWSGNLLGAATIPAGQSFTLNNVACDQQQVRVIAEDADGCFLS
                     TVVACGDSAVWTVTNASTRDCGNQD"
     gene            complement(633..3689)
                     /locus_tag="VIT19_04910"
     CDS             complement(633..3689)
                     /locus_tag="VIT19_04910"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HYR domain-containing protein"
                     /protein_id="HEY5838356.1"
                     /translation="MRFPSSASLVGETVELFAQDCSTPLSEMNLGEIVCAKTDGVDLT
                     IANNHYIVYTDSQLNETNGGTITQNPQFFYFTPPTTDVWKANIGRVVPPESSIIGNPP
                     LFTVNEGVGIATYAADCTTPKSTFTLGDVVCAKVSGADEFNRRFGWVDPSGITRAFTD
                     ITTDPQTDSYTLPATETSTIDVYVVDNRGEWQANVVSSRGGIVRSRPFQVQGNTPTAN
                     LSISKTVVGENPESGQSVTFAVAVTNNGPNPAENVEISDAEPDNATFVSGNQTSGPSF
                     SCTGTDPIVCTRGTNPSPLFLEPGETAVFEFVYTASGASGSSITNVATVESDTTELDA
                     VDNTAVYTVVIGGGSGNPDDCVLNCPPSLTVATNTTQSGNPGAIVTFGTGTSTGNCGT
                     ITATPASGSFFPVGTTTVEVESSVGGGSCSFAVTVIDSPSPTITCPANQTVEAPSGQA
                     EAAVSVGTPTVTGDNVVIGSERSDERPVSDPYPIGTTTIQWSATDEFDRQAFCTQTIV
                     VTSDDVPTISCPSNKTFNATNGCTYTATSGEIGSPTTSGAASPPGEPCPLSNPCAVRN
                     DGLALTDPFPAGQTRITWTATNAVGSASCEQFITVIGNDTEPPTLNVPPSIMTSTDQC
                     SVLLDDEQFVATADDGGECGSNVTITRTGMPQIPCPVPGNPSKTCDSFQFPTGTTVIS
                     YTATDSSGNSTSGTQTVTVNENPNIIPTIDAPQNLTFYTGPNATTCDTFVGDATLGTA
                     TASDNCPGVVVTRTGVPAGNVFPVGTTTITYRATDRVGNFAEDTQTVTVIDNTPPVIS
                     CPANITQDTDAGLCSAMVNVGTATATDNCDSNPTIVGTRSDNQPLNAPYPKGTTTITW
                     TATDHASPTPNQSSCVQTITVEDNEAPVITTTGLTPILWPANHAYHTFNVATFVLGAS
                     DNCDSLAVSDVTIQKVTSDETENGGGDGNTFNDIIIAADCKSFQVRAERRNSADGRVY
                     TVTFQVTDSEGNVGTKTAEIHVPKNLGVAVIDSGPNYTVNSTCVLP"
     gene            complement(4186..4656)
                     /locus_tag="VIT19_04915"
     CDS             complement(4186..4656)
                     /locus_tag="VIT19_04915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838357.1"
                     /translation="MAETLGTLADKLTTVQLKLWHTDDPERTRSLEVQQKQLQEEINE
                     FVGAALTGEIPIEKLTFAANKVYKKDGNAVPEFHGTIGEMFAQLAAVDCRLWHVQEKV
                     YEFEQVPMDQKDELIKQLAIVNLERNQCIDRLDEEFRKTVETCAAINRGNSASQ"
     gene            4958..5983
                     /gene="rfbB"
                     /locus_tag="VIT19_04920"
     CDS             4958..5983
                     /gene="rfbB"
                     /locus_tag="VIT19_04920"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007846915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEY5838358.1"
                     /translation="MKKLFVTGGAGFIGSAFVRLVIEELPSCEVINFDALTYAGNLEN
                     LDGVDTARHEFIKGDICDRDAVLAALKDDVGAIVNFAAESHVDRSIHSAHEFIQTNVL
                     GTQVLLDAARERGVRRFIQVSTDEVMGSLPENESAYFSEASPFEPNSPYAASKASAEH
                     LVRAANHTFGLDTVITRCGNNYGPRQFPEKFLPLMLANAFHDEPIPVYGDGLNVRDWI
                     YVDDHCRAILRLLQRGRSGGTYNIGARNEQRNIDVVHSVLDVLSKPRSLIQFVKDRPG
                     HDRRYAIDPSLIESELGWSPRETWESGLRKTIEWYRDNTAWIERVRSGAYREYYARQY
                     GTGATAS"
     gene            5980..6831
                     /gene="rfbD"
                     /locus_tag="VIT19_04925"
     CDS             5980..6831
                     /gene="rfbD"
                     /locus_tag="VIT19_04925"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HEY5838359.1"
                     /translation="MKVAVTGAGGLLGRAANSHCAAQGDEVHAFDHSALDITDAAAVK
                     TQLGDLRPDVVFNCAAWTDVDGCESDPDRAERANALGPQLLASTCREIDALLITVSTD
                     YVFDGMKAGFYTQRDHPNPISVYGRFKLEGERRAQTTYARTIVVRSGYIFGVGGTNFL
                     STVLDRARRGDRLTAISDMTGTPTYATDLAVRLRELAELDLPGVYHVVNAGDGGSFER
                     FARAALEIGGVDPARLVSTTLDELNRPAPRPRNSRLKCLLSEAIGLAPLPDWREALRH
                     FISLQSA"
     gene            7022..>8938
                     /locus_tag="VIT19_04930"
     CDS             7022..>8938
                     /locus_tag="VIT19_04930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide transport family protein"
                     /protein_id="HEY5838360.1"
                     /translation="MRPQRDLDAPLAEITRGKPFGKYAGYGSRPETTFREYLFVVLKR
                     KWLILSMVLVVTSLVAIQAYREPSIYRGAATIRVEPRPASVLQTGALVFNQTDPNFWG
                     TQIQLLQNPALARQVALTLDLPNNPAFLGGHAETGIFPSLKRIFSGEKKVAVPQGSNP
                     DPQPIGENEMKDKQLSAEDLKKLEAYEDALIANLEVITIGKTNLVTLHYEHTNPYLAQ
                     TIVNAFGDVFVQNNLERQEIGTSKAEISLAQAIAKYQEKVKNQRDARFNFAKQNGLPL
                     TPTAINLETEKERTYGSQLLAAENLRRTLKAEYDAARQTDDPLTNPEVQKDGLIGKLR
                     EKLSDLKETRDALLQIYTPDWPEVKKIDAQIKATEADLVKAPEQVLESMKKRYEAAEA
                     TERSLVVAYERQHGKTTNQTKAEIDLAAMSQELETDEQYLNTLLQKQRDLGATARDTG
                     TNVSVATRSRLPQTPIGPQRMRNIILAFFLSIVAGIGLAFLLDFLDDSIKSLNDIDHY
                     LNLPALAMIPSARNEKPRLGAGQTPATGQGDSTAIAMMGDVRSPVAEAYRHLRTSLLL
                     SSAGSPPKTILVTSSQPSEGKTTTAINTAITLSQTGAEVLIIDCDLRRPRLHSNFNLS
                     NTRGLTNYLSGEFAL"
BASE COUNT         2006 a         2428 c         2486 g         2018 t
ORIGIN      
        1 tttgaaagtg aaccgaaact tgttcatttg gagtctcctt ttttcatttg aagttgggga
       61 tggccgccag tagaacacgg atctgttccg gaccactgct gcgccgagta ttcccgggtt
      121 gataacgaga aaatgctcat caaagtcctt tgatgaatgc gtggcaaaat caatcctggt
      181 ttccacaatc acgagttgag gcgttggtta ctgtccaaac tgcactgtcg ccgcaagcaa
      241 cgacggtcga aaggaagcag ccgtccgcat cttcggcgat gactctgact tgctgctggt
      301 cgcacgcgac gttgttgagc gtaaacgact ggccggcagg aatagtcgca gcgcctaaca
      361 ggttaccgct ccagtcatta gcattgacgt gggaaatata aacattctga atttccctgc
      421 tcgaatcatt cacaatgttg actgaggtcg ctgcggttcg cgcgctggag atcagcggca
      481 aagccgccag ggccaggagc gcaaccagga tgacgaagcc gcgggtttta cgatagcttt
      541 cagagcgttt catgacgaac tcctatcaaa aaaaatgccg ttgaggtgaa gcgggcgtct
      601 cgggacgccc gcacccggtt aatgcccttc agttaaggca atacgcaagt actgttgact
      661 gtatagttcg gcccgctgtc tatcactgcc acacccagat tcttgggcac gtgaatctcg
      721 gccgtcttgg tgccaacgtt tccttcagag tccgtcacct ggaaggtgac ggtgtacacg
      781 cgaccgtcgg cggaattccg gcgttcggcg cgcacctgga acgacttgca atcggctgcg
      841 attattatgt cgttgaaggt gttgccatca ccgccgccat tttcagtctc atcactggtt
      901 accttctgga tggtcacgtc gcttactgcg agcgagtcac agttgtcact agcaccaagt
      961 acaaaagtag cgacgttgaa ggtgtgatac gcgtgattcg ccggccacag tatcggagtc
     1021 aggccggtgg tcgtgatgac cggggcctcg ttatcctcca ccgtgatcgt ctgcacacaa
     1081 ctggactggt tcggagttgg acttgcgtgg tccgtcgccg tccaggtaat cgtcgtcgtc
     1141 cccttcgggt aaggagcatt caacggctgg ttatcgctgc gggtgccgac gatggtcggg
     1201 ttgctatcgc agttgtccgt agccgtcgct gttcccacgt taaccatcgc cgagcaaagt
     1261 ccggcatcag tatcctgagt gatgttagcc ggacatgaga tcaccggcgg tgtgttgtcg
     1321 atgacggtca ccgtctgcgt gtcttccgcg aaattaccga cgcggtctgt cgcccgataa
     1381 gtaatggttg tcgtacccac cgggaataca ttgccggccg gaacaccggt gcgcgttact
     1441 actacacccg gacagttgtc actggccgta gccgttccca gcgttgcatc gccgacaaag
     1501 gtgtcgcacg tggtcgcgtt gggaccggtg tagaaggtca ggttttgcgg cgcatcaatc
     1561 gtcgggatga tgttcgggtt ctcgttaacc gttacggttt gagtaccaga cgtgctgttg
     1621 cccgacgaat cggtggccgt gtaactaata acagtcgtcc cggtggggaa ctggaagctg
     1681 tcacacgttt tggacggatt tcccggtacc gggcacggaa tctggggcat gccggtgcgg
     1741 gtgatagtca cgttagagcc gcattctccg ccgtcatcag ctgttgcgac gaactgttcg
     1801 tcatcgagca ggaccgaaca ctgatcggtg ctcgtcatga tgctcggcgg cacgttcagc
     1861 gtcgggggct cagtatcgtt acctattacc gttatgaact gctcgcaaga ggcgctgcca
     1921 accgcattcg tcgcggtcca ggtaatcctc gtttgacctg ccgggaatgg atcagtgagc
     1981 gcgagaccat cgtttcgcac tgcacacgga ttgctcagcg gacaaggctc tcctggcggg
     2041 gacgctgcgc cgctcgttgt cgggcttccg atttcaccag acgtagccgt gtaagtacat
     2101 ccatttgtgg cattgaaggt cttattgctc ggacagctaa tcgtcggcac gtcatctgaa
     2161 gtgacaacga ttgtctgagt acaaaatgcc tgacgatcga attcatccgt cgcggaccat
     2221 tggatggtag tcgtcccaat cggatatggg tcacttaccg gacgctcgtc acttctctcg
     2281 ctgccaatca ccacattgtc gccggtgaca gtgggcgttc cgacactgac ggccgcctca
     2341 gcctggcctg acggcgcttc aaccgtctgg ttcgccggac aagttattgt tggagaaggt
     2401 gaatcaatca cggttaccgc aaaagaacac gagccgccgc ccactgaaga ttccacttcg
     2461 accgtggtgg tgcctacggg gaagaaagag ccagaggccg gggtcgcagt tattgttcca
     2521 caattacccg tcgaggtgcc ggtgccgaaa gtcacgattg ctccaggatt accactttgg
     2581 gtggtatttg tggcgaccgt aaggctcggc ggacagttga gcacgcaatc atcaggattg
     2641 ccgctcccgc cgcctataac gacggtataa acggcagtgt tgtccactgc atcgagctca
     2701 gtcgtatcac tctcaacggt ggcgacgttc gttattgacg atccgctcgc gccgctggcc
     2761 gtgtaaacga actcgaaaac tgcggtctct cccggctcca ggaacaaagg acttgggttt
     2821 gttccgcgtg tgcaaacaat cggatccgtg cccgtgcacg agaaggatgg tcccgatgtc
     2881 tgatttccgg atacgaatgt agcattgtca ggttcagcgt cagagatttc gacgttctcg
     2941 gcgggattcg gaccattatt cgtgaccgca accgcgaacg ttacactctg accggattcg
     3001 ggattttctc cgacaacggt tttagaaatc gaaagattag ccgtcggcgt attgccctgc
     3061 acctggaatg gccggcttcg cacaataccg cctcggctcg aaaccacatt ggcctgccat
     3121 tcgccccggt tatccactac atagacgtcg atagttgaag tctccgtggc tggtagcgtg
     3181 tacgaatcgg tttgcgggtc ggtagtaatg tctgtgaacg cgcgagttat tcctgacgga
     3241 tctacccagc caaaccggcg gttgaattca tcggcgccgc tgaccttggc gcacacaaca
     3301 tcgcccaacg tgaaagtcga tttcggagtc gtacaatccg cggcgtacgt cgctatgccg
     3361 acaccctcat tcacagtaaa aagaggagga ttgccgatga tcgacgactc aggcggcact
     3421 actcttccaa tgttagcttt ccaaacatcg gtagtcggag gcgtgaaata gaaaaactgc
     3481 ggattctggg taattgtccc accatttgtc tcgttcaact gcgagtccgt gtagacaata
     3541 taatggttat tagcaatcgt gagatcgacg ccatcagtct tggcgcaaac aatttcaccg
     3601 aggttcatct cggacagcgg agtcgaacag tcctgagcaa acaactcaac agtctcgccc
     3661 accagggagg ccgaactcgg gaaccgcatt tccgtgtgtg cgctgattgg cgcgctggtt
     3721 gggccaactc ttggtgtgct tgcgacgcgt gacctcgaac ccacggaaaa aggtacggct
     3781 attgcagcaa cagcaaacaa aagcacaacg agtgcggtcg aataactggt gcggggaata
     3841 cgcgtagggc gaactggggt attcataacg tctatatctc ctcgggttcg attacgaaat
     3901 gattttccaa aacgaaaagg tgcgtctgag taaaatcgtt ctcttgtcat ctaggccggt
     3961 agagttgacg ggtacgactc tagcgatgct aaggactgag gcgcgatact ctagtcttaa
     4021 tcagaaagtc cgtcaagcct tttttgcaaa aatcttgcgc gcatgccgcg atttgattgt
     4081 attgaaaagc cgtaagtaga cgagccttga taagctcgtt tgcgtaagcg gcaacttact
     4141 ttttcttaac cgtaaaagag atgtgagaag cggcggttag caagtttatt gactggcgga
     4201 gttacctcta ttaattgccg cgcaagtctc gacggtttta cggaattctt cgtcaagccg
     4261 atcgatgcac tgatttcgct caagattcac aattgcgagc tgtttgatga gttcatcttt
     4321 ttggtccatc ggcacctgct cgaattcgta cactttttcc tgcacgtgcc agagccggca
     4381 gtcaaccgcg gccagttgcg cgaacatctc gccgatcgtt ccgtgaaact ccggaaccgc
     4441 gttgccgtcc ttcttgtaaa ccttattagc ggcgaaggtg agtttctcga ttggaatttc
     4501 accggtgaga gcggccccca cgaactcatt gatctcttcc tgaagttgct tctgttgtac
     4561 ttccaggctg cgggtgcgtt caggatcgtc ggtgtgccaa agcttgagct gcaccgtcgt
     4621 cagtttgtcc gcgagtgttc caagagtttc tgccatgttt aagtttgccg agtcaggtag
     4681 ccagacaaat gaaagaccgt cgatcgcaca gatgcgagcc gagacagcgc cgcctgtgac
     4741 taagccctca cggcaggtca aattaccgtg ccggtgaaga aattgcaaag caattacatc
     4801 gcgcaaagag ccaggcattg gcgcgcgaat cggaaaaaag aagacagttt ggccgacggt
     4861 cagcaagcgc tggcaccgcg gtcaatgcta ctatcacgca cgacctcagc ccttcgacgc
     4921 tgctgggagg tgttcgcaaa taacgactca aaacggtttg aagaagcttt ttgttacggg
     4981 cggcgccggc ttcatcggtt cggcattcgt gcggcttgtt attgaagaac tgccgtcctg
     5041 tgaagtcatc aacttcgacg cgctgaccta cgctgggaac ctcgagaacc ttgacggcgt
     5101 ggacactgcc cgacacgagt tcatcaaggg agacatctgc gatcgcgacg cggtgctcgc
     5161 ggctctcaaa gatgacgttg gagcaattgt aaatttcgcc gcggaatctc acgtcgatcg
     5221 cagcattcac tcagcgcacg aattcattca gaccaacgtg ctcggaacgc aggtgctgct
     5281 cgatgccgcc cgcgaacgcg gcgtgcgacg ctttattcag gtttccactg acgaagtcat
     5341 gggcagcttg cccgaaaacg agagcgccta tttcagcgaa gcttcgcctt ttgagccaaa
     5401 cagtccgtac gcggcttcga aggcgtcggc cgaacatctg gtgcgtgctg ccaatcacac
     5461 atttggcctg gacacagtca tcacgcgttg cgggaacaac tatggcccga ggcagtttcc
     5521 ggagaagttc ttaccgctga tgctggcgaa cgcgtttcac gatgaaccaa ttcctgttta
     5581 cggtgacggt ctgaacgtgc gcgattggat ttacgtggac gatcactgcc gcgcgatctt
     5641 gcggctgctg cagcgcggtc gttccggcgg aacttacaac atcggcgcgc gcaacgaaca
     5701 acgcaacatc gacgtagtgc acagcgtttt ggacgtgctc agcaaaccgc gttcgctcat
     5761 tcagtttgta aaggatcgcc cgggccacga tcgccgttac gccatcgatc cttccctgat
     5821 tgaaagtgag cttggctgga gcccgcgcga gacatgggag agcggcctgc gcaaaacgat
     5881 cgagtggtat cgcgacaaca ccgcgtggat tgaacgcgtg cggagcggtg cataccgcga
     5941 gtattacgcg cgtcagtatg gaacgggagc aacggcaagt tgaaggtcgc cgttaccggt
     6001 gcgggaggcc ttttgggccg tgcggccaac tcacattgcg ccgcacaagg cgatgaggtg
     6061 cacgccttcg atcatagcgc gttggacatc accgacgcgg cggcggtgaa gactcagctc
     6121 ggcgacctca ggcctgatgt tgttttcaac tgcgcggctt ggaccgatgt tgacggatgc
     6181 gaatccgatc ccgatcgtgc agaacgcgcg aatgcgctcg gtcctcaact gctggcttcg
     6241 acctgccgcg agatcgacgc tctgctcatt acggtttcaa ctgattacgt tttcgatggc
     6301 atgaaggcgg gcttctacac gcaacgggat cacccaaatc caatcagcgt ctatggccgc
     6361 ttcaaattgg aaggcgaacg tcgcgctcaa actacttatg cacgaaccat cgtagtgcgc
     6421 agtggctata ttttcggcgt tggtggaact aactttctca gtacggtttt agaccgtgct
     6481 cgtcggggag atcgtttgac agcgatttct gatatgaccg gcacgccgac ttatgcaacc
     6541 gacctcgcgg tcaggcttcg tgaactcgct gagctcgact tgccgggggt ctatcacgtc
     6601 gtgaacgcgg gagacggcgg cagctttgaa aggttcgctc gagcggcatt ggagattggg
     6661 ggagtcgatc ctgctcggtt ggtgtcaacc acgctggacg agttgaacag gcccgcgccg
     6721 cggccgcgga actcgcgact caaatgtctc ctttcggagg caatcggact cgcgccctta
     6781 ccagactggc gagaggcctt gcgccacttt atttcgttac aatctgctta gatgacccgc
     6841 ccggcgtaat ttttcggggt gtgttcggcg cgccttgcca tgcgcccgaa ttacactgcc
     6901 gaatgcctga tatgagcttg cctgagggcc ggggtctgct atcatgtcac ttctgtgccg
     6961 agcactagat cttaagagat aggtttctga aattatgatg caagacgaac gcttactccc
     7021 gatgcgcccg caacgcgact tagacgcccc tctggctgaa atcacacggg gaaaaccatt
     7081 cggaaaatat gcgggctacg gcagtcggcc cgagaccact tttcgggaat accttttcgt
     7141 agtactgaag cgtaagtggc ttatcctgag catggtcctg gtggtcactt cgctggtggc
     7201 aattcaggct tatcgcgaac cttcgatcta tcgaggcgcc gctacgattc gcgtcgaacc
     7261 aaggccggca agcgtcctcc aaaccggagc gctcgtcttc aatcaaaccg accccaactt
     7321 ttggggaacg caaatacagt tgctccagaa ccccgcgctg gcccgccagg tcgccctgac
     7381 gctggatctg ccaaacaatc ctgcttttct cggtggtcat gctgagaccg gcatcttccc
     7441 atctttgaag cgaatcttct ccggtgagaa aaaggttgca gtgcctcagg gtagcaatcc
     7501 cgacccgcaa cccatcggcg aaaacgaaat gaaggacaag cagctttctg ccgaggatct
     7561 taagaagctt gaggcctacg aggacgcact tatagcgaac ctggaagtta taactatcgg
     7621 gaaaaccaat ctcgtcacac ttcattatga gcatacgaac ccgtatctgg cccagacaat
     7681 cgtcaacgcc ttcggcgacg tttttgtcca gaacaatctt gaacggcagg aaattggcac
     7741 aagcaaagcg gagatttccc tggcccaggc aatagccaag taccaggaaa aagttaaaaa
     7801 ccaacgagac gcgcggttta attttgccaa gcaaaatggt ttgccgctca cgcctacggc
     7861 aattaacctc gagacggaaa aagagcgcac ctacggctcg caattgttgg ccgcagaaaa
     7921 cctgcgccga acgctaaagg ctgaatatga cgcagcccgg cagaccgacg acccgcttac
     7981 caatcccgag gttcagaaag acggactcat tggaaagctg cgagaaaagc ttagcgattt
     8041 gaaagagaca cgggatgctt tgctccagat ctacacgccg gattggccgg aagtgaaaaa
     8101 aatcgacgcg caaataaagg cgaccgaagc tgacctggta aaagctcctg agcaggttct
     8161 ggagtcaatg aaaaagcgtt acgaagcggc tgaggccacc gaaaggagcc tggttgtcgc
     8221 ttacgaaaga cagcacggga agactacgaa ccagacaaaa gccgagatcg atctggctgc
     8281 catgtctcaa gagttggaaa cggacgagca gtatctaaat acgctgctgc aaaaacagcg
     8341 ggatttgggt gcgactgccc gcgacaccgg cactaatgtt tcggtggcaa ctcgcagccg
     8401 cctgccacag acgcctatcg ggccccagcg gatgcgcaat atcatcctgg cctttttcct
     8461 ttcgatagtg gcgggaattg gattggcgtt cttgctcgat tttctcgacg attcgatcaa
     8521 atcacttaac gatatcgacc actaccttaa tctgcccgcc ctggcaatga ttccctcggc
     8581 ccgtaacgaa aagccgagac tgggcgccgg gcagaccccg gcaaccggcc agggtgattc
     8641 gacggcaatc gcgatgatgg gtgacgttcg gtcaccagtg gcagaagcct accgccacct
     8701 gcgaacgtca ctgctgctct cgtccgccgg ttcgccgccc aagacaattc tggttacttc
     8761 aagccagcct tctgaaggaa agacaactac ggctattaat accgcgatca cgttgtccca
     8821 gacaggcgct gaagttctga tcatagattg tgatttgcgc cggccgcggc ttcactcaaa
     8881 ctttaatttg tcgaacactc gcggactgac aaactacttg tcgggggaat ttgcgctt
//
LOCUS       DATDBY010000263         2215 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1245182, whole genome shotgun sequence.
ACCESSION   DATDBY010000263 DATDBY010000000
VERSION     DATDBY010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1245182"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VIT19_04935"
     CDS             <1..459
                     /locus_tag="VIT19_04935"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEY5838361.1"
                     /translation="SQAALTHVKDQGSSGGTGHRSGNSSMIEDRVKPYGRWSGAIGEN
                     ICYGNDSARERLLTWLIDDGFPSRGHRRRLLGTEYQVAGISCGSHPQYNAMCVLTLAG
                     GFSEFAPGTSATKTATTPAKTTTTKTTTTPAKTTPPKTGGAKPKPAPVRM"
     gene            complement(553..629)
                     /locus_tag="VIT19_04940"
     tRNA            complement(553..629)
                     /locus_tag="VIT19_04940"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(593..595),aa:Pro,seq:ggg)
     gene            complement(686..1195)
                     /locus_tag="VIT19_04945"
     CDS             complement(686..1195)
                     /locus_tag="VIT19_04945"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEY5838362.1"
                     /translation="MTSVAIPEKLFFKIGEVCELAGVQAHVLRYWETEFPTLAPQKNR
                     AGQRTYRRRDVEMALRIKELLYDEQYTIAGAKKKLANELRPGALVRDSAAAAKAPVRS
                     LKPPPSLAGRLSSAATQPAPETSAPQNSDDVNSDSKAELRRIASELKEILKLLNETDA
                     ELRKDTEEA"
     gene            1479..>2215
                     /locus_tag="VIT19_04950"
     CDS             1479..>2215
                     /locus_tag="VIT19_04950"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY5838363.1"
                     /translation="MIATAAGFRLAARFDDVGFSDIVNMRNRVMELRAQGASVYQFEG
                     GEPFRPTPDYIKDAMVAALKDNKTRYAPSSGIPELRQAITDKLRTRNNIPANVENVLV
                     VIGGMQGLFAAFQSVVNPGDEVLVFSPFWTPIKDLVAHCEGRIVLVPTQEARADGFAA
                     TLARYASTNTRAIYFNTPTNPSGVVFTRAEAEAVARFAIDRDLVIIADEAYEDIVYDS
                     EHFSIASLDGMFERTITTFTLSKSYAMT"
BASE COUNT          466 a          664 c          623 g          462 t
ORIGIN      
        1 tcccaggctg cgctgaccca cgttaaagac cagggcagca gcggaggaac cggacatcgc
       61 agcggcaaca gcagcatgat cgaagaccgc gtgaaaccgt atggccgatg gtcgggcgca
      121 atcggcgaga acatctgcta cggaaacgat tccgcgcgag aacgattgct gacctggttg
      181 attgacgacg gctttccgag ccgcggccac cgccgtcgtt tgctgggaac cgaatatcaa
      241 gtcgcgggga tttcgtgcgg atcgcatcca cagtataacg cgatgtgcgt tctcactctt
      301 gcaggtggct tcagtgaatt cgctcccggg acgtccgcca cgaagactgc aactacgccg
      361 gccaagacaa ccactacaaa gacgacgaca actccggcca agaccacgcc gccaaagact
      421 ggtggcgcaa aacccaagcc cgcaccggtc aggatgtagc ggggcgcgcg catcttgtgc
      481 gtgagtccac gggcgggacg cctgggccac aaaggaaaag gctttccgtt tttacacgga
      541 aagcctttct aatggtcggg acgactggat tcgaaccagc gacctcacgc accccaagcg
      601 tgcgcgctac caggctgcgc cacgtcccgt caacgctttt agtatcgccg caaacatttg
      661 gatttcaaaa cgtgcgcgta attagtcacg cttcttccgt gtctttccgg agttccgcgt
      721 cggtctcgtt gagcaacttc agaatctctt tcagttcgga cgcaatccgt cgcaactcag
      781 ccttgctgtc gctgttgacg tcgtcagaat tctgaggcgc ggaggtttcg ggcgccggtt
      841 gcgttgcggc tgaggataac cgcccggcca gcgacggtgg cggttttaag ctgcggaccg
      901 gcgcttttgc ggccgctgcg ctgtcgcgca caagcgcgcc agggcgtaat tcatttgcca
      961 atttcttttt tgctcctgcg atagtgtact gctcgtcgta aagcaattct ttgatccgca
     1021 gcgccatttc cacgtcacgg cgccggtaag tgcgttggcc cgcccggttt ttttgcggcg
     1081 ccagcgtcgg gaattcagtc tcccaatacc tcagcacgtg agcctgcacg ccggcgagct
     1141 cgcacacctc accgattttg aagaacaact tttcaggaat agcgacggaa gtcatcgaga
     1201 gcgcgacagc aaagtgcctg cgtcgccggg ccgacctttc aaaggccacg cgaagctgcc
     1261 gcatgttaac tgccgaaact tttgcgtgtc aacagtttct tacacttaca gccgccaagt
     1321 tcaagcgaga gtttaaaacc aaaatcttaa ccacgaagtc gttcagggcc ggcttcagcc
     1381 gaattgttgg tctggcgggc ggattaggcg agcaacgcga ccgcagctat aatctggctt
     1441 tctaagcacc cgccctaatc ggaggtttct tacccaaaat gatcgctacg gccgccgggt
     1501 ttcgcctcgc cgcgcgcttt gatgacgtcg gattctcgga catcgtaaac atgcgtaatc
     1561 gggtcatgga actccgagcg cagggcgcga gcgtctatca gttcgaaggc ggcgaaccct
     1621 tccggccgac gcccgactac atcaaggacg cgatggtggc ggcgctgaaa gacaacaaga
     1681 ctcgctatgc gccctcgtcc ggtattcctg aattgcgcca ggccatcact gacaagctac
     1741 ggacgcgcaa caatattccg gcgaatgttg agaacgtcct ggtggtcatt ggcggtatgc
     1801 agggtctgtt cgccgcgttc caatcggtag tcaatcccgg cgatgaggtt ctggtgttct
     1861 cgccgttctg gactcctatc aaagatttgg tcgcgcactg tgagggacgt atcgtgctcg
     1921 tccccaccca ggaggcgcgc gcagacggat tcgcagcgac cctggcgcgc tacgcctcga
     1981 caaatacgcg cgcgatctac ttcaacacgc cgaccaatcc ttccggtgtg gtgtttacgc
     2041 gagctgaagc cgaggcagtc gctcgctttg caatcgatcg cgacctcgtc atcatcgccg
     2101 acgaagctta cgaagacatc gtttacgaca gcgagcactt ctcaatcgcg tcgctcgacg
     2161 gcatgtttga acgaacgatc acgaccttca cattgtcgaa gtcttacgcg atgac
//
LOCUS       DATDBY010000264         2468 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_6362, whole genome shotgun sequence.
ACCESSION   DATDBY010000264 DATDBY010000000
VERSION     DATDBY010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6362"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..524
                     /gene="dut"
                     /locus_tag="VIT19_04955"
     CDS             93..524
                     /gene="dut"
                     /locus_tag="VIT19_04955"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF001862.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEY5838364.1"
                     /translation="MDVGQSLKFKKLDSSAMLPTRGSTAAAGLDLYSIEAVCLHPKQR
                     SLVRTGLAVAIPEGCYGRIAPRSGLATKMGLDVLSGVIDADYRGEIKCLLYNTGDDMV
                     ELPAQTRICQLIIEKILTPTPVLVDDLPSTIRGSGGFGSTG"
     gene            639..2327
                     /locus_tag="VIT19_04960"
     CDS             639..2327
                     /locus_tag="VIT19_04960"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEY5838365.1"
                     /translation="MILRNSQLQRAAAGKLAVLLSLLLLFSSVLGVSRPVTAAPLQSQ
                     LSAAEQDLISHIKVEQIREVVSALSADEMEGRGTAQAGGDKAANYLAERFAKMNLKPL
                     GVKNSFLQPIKFRDSEFLPETGMRIGDQELKLGADFAITPWVTGDKNASGSMVFIAYG
                     LVHSTLKRNDVAGLNLQGKIVVMVQGPPANVSKDSWKKINAQIEILSGLAAAGVAGIV
                     FISHGREEHPYAKLADYYVRRRVERADSAELPPGLPPFVAISDATADKLFAKSGTSRT
                     EALAKAENSSFTPIDLKQSAKITVRLKKGKGIASNVIGLLEGSDPTLKNEAVVYSAHY
                     DAYGMSADKRVYPGAADNALGVAEMIAIADAFSQAPTKPKRSIIFMAVTGEEYGGLGS
                     DYWVRNPTWKIKQTAANLNLDGMGTEVYGPVKVIVGFGAEHSSLGKVLEDVSRAQGLR
                     VIPDPMPDEKAFYRSDHYYFVKKGIPGIMLLGAPEGETKVWIDRMKLWEKTDYHQPTD
                     TIRPEWNWEGPRTIAEVMAIMGSRIANDTNMPNWVATSPFNRERGTNAPPPPEP"
BASE COUNT          618 a          656 c          683 g          511 t
ORIGIN      
        1 tgattgctgt cggatcccaa tagttagtga aatcccgcga tagttagtga cggcggtcgg
       61 acgctgtaat tgcctgacac gctcacacgc ctatggatgt tggacagtca ctaaaattca
      121 aaaagctcga ttcaagtgcg atgctgccaa cccgtggtag tacggccgcg gccggcctgg
      181 acctctattc aatcgaagca gtctgtctgc atcccaaaca acggtcattg gtgagaacgg
      241 gtttggcggt cgcgatacct gaaggctgct acggcagaat tgcaccacgt tcgggactag
      301 cgacaaaaat gggattggac gttctatccg gcgtcatcga tgctgactat cgtggcgaga
      361 tcaaatgttt gctctataac actggtgacg acatggtaga gctgccggcg cagaccagaa
      421 tctgccagtt aataattgaa aagatcctca cgccaactcc cgttttagtt gacgatcttc
      481 cgagcacaat acgcggcagc ggtgggtttg gctcgaccgg ctaaaagtct tatgctcgcg
      541 gaggaaatat cagggacagg cagggctgac gtttcgcgac tctaaaccaa cctttcttca
      601 attagcctga taaaaagacc cctttcgagg atgcttccat gattctcagg aactcacaat
      661 tacaacgagc tgcggcggga aaactcgccg tattgctttc gcttctactg ctgttttcct
      721 cagtactcgg cgtcagtcgt ccggtaactg cggctccgtt gcagagtcag ctttccgccg
      781 cggagcaaga cctcatatcg cacatcaagg tagagcaaat ccgcgaggtt gtgtcggcgt
      841 tgtcggccga cgaaatggag ggccgcggca ctgcgcaagc aggtggcgac aaggcagcca
      901 actatctggc tgagcggttt gccaaaatga atctgaagcc gttaggcgtc aagaactcat
      961 ttctgcaacc gatcaagttt cgcgactccg agttcttacc agagacaggt atgagaattg
     1021 gcgatcagga actgaaactc ggtgcggatt tcgcgatcac cccgtgggtc accggcgaca
     1081 aaaacgccag cggctctatg gttttcatcg cctatggact tgtgcacagc acgcttaagc
     1141 gcaacgacgt cgccggtctg aatctccagg gcaaaatcgt ggtgatggtg caaggcccac
     1201 ccgcaaatgt aagcaaagat tcctggaaga agataaacgc gcaaatcgaa atcctcagcg
     1261 gtctggccgc cgcaggagtc gcggggattg tcttcatcag ccatggaaga gaagaacacc
     1321 cgtatgcgaa gctcgcagat tattacgtcc gtcgtcgagt agaacgcgct gactcagcgg
     1381 aactgccgcc gggattgccg ccgtttgtgg cgatcagtga tgcaaccgcc gataagcttt
     1441 ttgcaaagtc gggaacctcc aggaccgagg cgctggctaa agctgagaac tccagcttta
     1501 caccgatcga tctaaagcag agtgcgaaga ttaccgttcg cctaaaaaaa ggaaagggca
     1561 tcgcaagcaa cgtcatcgga ttgctcgagg gatcggaccc gacgcttaag aacgaggcgg
     1621 tcgtgtattc ggcacactac gacgcttacg gcatgtctgc cgacaaacgc gtctacccgg
     1681 gagctgctga taatgcgttg ggtgtcgcag aaatgatcgc tatcgcggac gctttttcac
     1741 aggcaccgac taaaccgaag cgatcaatca tctttatggc cgtgacggga gaggagtatg
     1801 gcggcctcgg ctcggactac tgggtgcgta acccgacctg gaaaattaag caaacggccg
     1861 ccaacctcaa tctcgatggc atggggacgg aggtttatgg gccggtgaaa gtaattgtgg
     1921 ggttcggggc cgagcactct tcgctgggaa aagtactgga ggatgtctcg cgcgcccagg
     1981 gcttgagagt catacccgat ccaatgcccg acgagaaggc cttctatcgc tctgaccact
     2041 actacttcgt gaaaaaagga attcccggca ttatgttgct gggcgcacct gaaggagaaa
     2101 caaaggtctg gatcgatcga atgaaactct gggagaaaac cgactatcat cagcccacgg
     2161 acaccatccg ccctgagtgg aactgggaag ggccgaggac gattgccgaa gttatggcaa
     2221 tcatgggttc gcgcatagcc aacgacacga acatgccaaa ttgggtagcg acatcaccat
     2281 tcaatcgcga acgcggcaca aacgcgccgc cgccgcccga gccttaaaac cgcaaacctg
     2341 ttgtaaagtt gattgaccat gcatcgccaa caccgaattg cgcgtcggca ttgatcgcgc
     2401 gccaatcagc ccgcgtttcg tcgctactta taactaatca caactcgctg aatcgacggc
     2461 ggcagctc
//
LOCUS       DATDBY010000265         2466 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2664529, whole genome shotgun sequence.
ACCESSION   DATDBY010000265 DATDBY010000000
VERSION     DATDBY010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2466
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2664529"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /locus_tag="VIT19_04965"
     CDS             <1..434
                     /locus_tag="VIT19_04965"
                     /inference="COORDINATES: protein motif:HMM:NF014662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HEY5838366.1"
                     /translation="RSADILSAVRGHLARLFAGRMPGYRTQDACVPTIMGTITQRDLY
                     RMISDVGARGERVVVATVADTRGSTAQRRGAKMLFFENGETAGTVGGGCVEAEVWAEA
                     REAMRSGQSKLHHFTLTADEASEEGMVCGGTMDIFIELVNG"
     gene            complement(484..912)
                     /locus_tag="VIT19_04970"
     CDS             complement(484..912)
                     /locus_tag="VIT19_04970"
                     /inference="COORDINATES: protein motif:HMM:NF014662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HEY5838367.1"
                     /translation="MSAVRGHLARLFAGRMPAYRTQDAFVPTIMGTITQRDLYRMISD
                     VGARGERVVVATVADTRGSTPQRRGAKMLFFENGETAGTVGGGCVEAEVWAEAREAMR
                     SGQSKLHHFTLTADEASEEGMVCGGTMDIFVEVMGETSKS"
     gene            complement(926..1663)
                     /locus_tag="VIT19_04975"
     CDS             complement(926..1663)
                     /locus_tag="VIT19_04975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838368.1"
                     /translation="MRSKSIRHLVMIAVAVLLLGAFLIDSTAQRRRRRQRVRRPTTPR
                     ITNPPIYQPPAEDTNANTSTSDPATSPETNEDPQTKTIRDLTSQVDKLTNKISQMEES
                     QRTLVDLERLSRAEQRSAELWKQLRDVESQKADLQSRLEEIDYALKPENIDRSVAGYG
                     STRPEEVRERRRQQLEGEKLRAQKQLDQLTANHTRLETAIAAADTEVDRLRKRLDASE
                     QAALENAKTKTQTEGAAPAPTPSPRPR"
     gene            complement(1839..>2466)
                     /gene="nadC"
                     /locus_tag="VIT19_04980"
     CDS             complement(1839..>2466)
                     /gene="nadC"
                     /locus_tag="VIT19_04980"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEY5838369.1"
                     /translation="EEVEAGKVIGRTSGFAEVLLAGERVALNLLQHLSGVATRTREFA
                     KAVEGTNAKIADTRKTMPGLRMLEKYAVLLGGGVNHRYGLDDGVFIKANHVTLAGGVG
                     RAVKSTREKIGHLHKVEVEVATEREVKDAIDNGADAVTIIVAEISAATELIRKAREVA
                     PATSIVVSGAVTLENVRGFAEAGANLIRVDALTQSVRAMDISFQIQAG"
BASE COUNT          471 a          764 c          684 g          547 t
ORIGIN      
        1 ataggagcgc cgacatcttg tcggcggttc gcgggcatct tgcccgcctc tttgccggca
       61 ggatgccggg gtaccgcacg caggatgcgt gcgttccaac catcatgggg accatcactc
      121 aacgcgatct ctatcgaatg attagcgacg tgggcgcgcg cggtgagcgt gtcgtcgtcg
      181 cgacggtcgc cgatacgcgc gggtcgacgg ctcaacggcg cggcgcaaag atgctgttct
      241 tcgaaaatgg ggagaccgcg ggcacagtcg gcggcgggtg cgtcgaagct gaagtttggg
      301 ccgaggcgcg cgaggccatg cgttcaggcc aatcaaagct ccatcacttc acattgacgg
      361 cagacgaagc cagcgaagaa ggcatggtct gcggcggcac tatggatatc tttatcgaac
      421 tggtaaatgg ttaatcgtaa atagtaaatg gaaacacccc cagttctatt caccatttac
      481 aatttacgat ttacttgttt cacccatcac ctcaacaaag atatccatag tgccgccgca
      541 gaccatgcct tcttcgctgg cttcgtctgc cgtcaacgtg aagtgatgga gctttgattg
      601 gcctgaacgc atggcctcgc gcgcctcggc ccaaacttca gcttcgacgc acccgccgcc
      661 gactgtgcct gcggtctccc cattttcgaa gaacagcatc tttgcgccgc gccgttgtgg
      721 cgtcgacccg cgcgtatcgg cgaccgtcgc gacgacgacg cgctcgccgc gcgcgcccac
      781 gtcgctaatc attcgataga gatcgcgttg agtgatggtc cccatgatgg ttggaacgaa
      841 cgcatcctgc gtgcggtacg ccggcatcct gccggcaaag aggcgggcaa gatgcccgcg
      901 aaccgccgac aagatgtcgg cgctcctatc tcggtctagg cgacggtgtc ggagctggag
      961 ctgcgccttc ggtctgggtc ttcgtcttgg cgttttccag tgccgcttgc tcagaagcgt
     1021 caaggcgttt gcgaagtcgg tcaacctcgg tatcggctgc cgcaatcgcc gtttccagac
     1081 gcgtgtgatt ggcggttagc tgatccagtt gtttctgcgc gcgcagcttt tcgccttcca
     1141 gttgctgccg ccgcctttcg cgcacttctt caggacgtgt cgatccgtag cccgcaacgg
     1201 accggtctat attctcgggt ttcagcgcgt aatcgatttc ttccaaacgc gactggagat
     1261 cagctttttg cgactcgaca tctcgcaact gcttccacag ctcagccgat ctctgctcgg
     1321 cccgcgacag tcgctcaaga tcgaccagcg tgcgctgcga ctcttccatc tgactgatct
     1381 tgttcgtgag cttgtcgacc tgcgacgtca aatcgcggat cgtcttcgtc tgcggatctt
     1441 cgtttgtttc aggagaggtc gccgggtctg acgtcgaagt gttcgcgtta gtgtcctcag
     1501 cggggggctg ataaatcggc gggttagtga tgcgcggcgt cgtggggcgg cggacccgct
     1561 gacggcgacg gcgacgttgc gccgtcgaat cgatgagaaa tgcgccgagg agcagaactg
     1621 ccactgcgat catgaccaaa tgccgaattg atttcgatct catcacttac tcctgctaac
     1681 tactttaact aatgatgccg tcagagcaat tcacgatgcc atgaagtcag taccacctgc
     1741 gtcagcaggt gggtcattga ttcaacctta agcgacgcat tatcccatcc gctgacgcgg
     1801 atggtactga ctccgtcacc gacgaccggg gcatcccatc accccgcctg aatctgaaaa
     1861 ctgatgtcca tagcgcgaac ggactgggtt aaagcgtcca cgcgaatcag gttcgcgccc
     1921 gcttcagcaa acccgcgaac gttttccagc gtgaccgccc ccgagacaac tatcgacgtc
     1981 gccggcgcca cctcacgggc ttttcgaatc aactcagttg ccgcagaaat ctcagccact
     2041 atgatcgtga cggcgtcagc gccattgtct atagcatctt tgacttcccg ctcagtcgcg
     2101 acttcgactt caactttgtg caaatgcccg atcttctcac gcgtggattt gaccgctctt
     2161 ccaactcctc ccgccaacgt cacgtgattc gctttgatga acacgccgtc atccagtccg
     2221 taacgatgat tgacgccgcc gccgagcagc accgcgtact tttcaagcat gcgcaggccg
     2281 ggcatcgtct tacgcgtatc ggcaatcttc gcgttagtgc cttcaaccgc cttggcgaac
     2341 tcgcgcgtgc gggtcgccac acccgaaaga tgctggagca gatttagcgc cacgcgctcg
     2401 cccgccaaca gcacttccgc gaagccgctc gtgcgaccga taactttgcc ggcttcaacc
     2461 tcctcg
//
LOCUS       DATDBY010000266         2552 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1541354, whole genome shotgun sequence.
ACCESSION   DATDBY010000266 DATDBY010000000
VERSION     DATDBY010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1541354"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1644
                     /gene="dnaX"
                     /locus_tag="VIT19_04985"
     CDS             <1..1644
                     /gene="dnaX"
                     /locus_tag="VIT19_04985"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004046.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEY5838370.1"
                     /translation="QEVLTRTLQNALEHDRLHHAYLFSGARGVGKTTTARLVAKGLNC
                     HKANGPTAAPCATIDEQACPSCREISEGRSMDVLEIDAASNTGVGEVRDVIITGININ
                     PARDRYKVFIIDEVHMLSTSAFNALLKTVEEPPPRVVFIMATTDAHKVPETISSRCQI
                     FEFRTIATVKIAERLRLIANAEEVSISDEALREIARAGDGSMRDAQSAFDQVISFAGK
                     KIATADVEKALGLAGADVLARVMCGIAENKPAEALAIVDDIVMRGHNLRNFCREVLAH
                     LRDLLVVKVSADPKILDSASTHAAALKQQAEQFSESDLVRFFHSLAETESTLKDAANP
                     RYQVEVGLVKLMEMRRLAPLGDLVERIAALESALRTGKGPAEKASLRTETATPTINRP
                     SPTASNVPFESVASAETASAEPSAAKTNTFCDNVKAKLKQKRRPLLVAALDGAVRAEL
                     EGDEFLVEFTQENKHYRNTLARADNAKALREACADSCGHEVGIRYIIKSEDDAVASTD
                     VTPDAREAKQKARRAAAADPNVQQVQRTFGAEIVDVKQT"
     gene            1677..>2552
                     /locus_tag="VIT19_04990"
     CDS             1677..>2552
                     /locus_tag="VIT19_04990"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5838371.1"
                     /translation="MNPTRQSLLGMWALLLLVFLTAVAGAQPSTSKPTPTVYLLKPAR
                     IFDGESGQLHTDWVVLVRGEKIEAVGPASEIKAPSGAKVIELRGMTLMPGLIDAHSHV
                     LLHPYSETSWNDQVARESLSLRVARATNHLRSSLMAGFTTLRDLGTEGASYADVGLKQ
                     AVQQGIIPGPRLIVTTRAIVATNTYGPKGYASEWSVPQGAEEADGVDNLTRVVRDQIG
                     KGADWIKVYADYRWGAGGTAHATFTLDEMKLIVEVAKSGGIPVAAHASSTEGARRAIL
                     AGVETIEHGDGLTPEL"
BASE COUNT          553 a          752 c          778 g          469 t
ORIGIN      
        1 caggaagttc tgacgcgcac gctccagaac gctttggagc acgatcgcct gcatcacgcc
       61 tatctttttt ccggcgcccg cggcgtggga aagacgacca cggcgcgact ggtcgccaaa
      121 ggtctcaact gtcacaaagc aaacggcccg accgcggcgc cgtgcgcgac gattgacgaa
      181 caggcttgtc cttcgtgtcg tgaaatctct gaaggccgtt caatggacgt gctggagatc
      241 gatgccgcgt cgaacacggg cgtgggcgaa gttcgtgacg tgatcatcac cggcataaac
      301 atcaatcccg cgcgcgatcg ttataaggtc ttcatcattg acgaagtcca catgctttcg
      361 acttcagcgt tcaatgcgct gctgaaaacg gtcgaagagc caccgccacg cgttgtcttc
      421 atcatggcga cgaccgacgc gcacaaggtg cctgagacaa tttcgtcgcg ctgccagatt
      481 ttcgaattcc gcaccatcgc cacggtgaag attgccgaac ggctgcgatt gatcgccaac
      541 gcggaagagg tttcgatttc cgatgaagcg cttcgcgaaa tcgcccgcgc cggtgatggc
      601 tcgatgcgtg acgcgcagtc cgctttcgat caggtgatca gtttcgccgg caaaaagatc
      661 gccaccgcag atgtcgagaa ggctttgggc cttgccggcg ccgacgtgct cgcccgcgtg
      721 atgtgcggca tcgctgaaaa taaaccggct gaagcgttgg cgattgtaga cgacatcgtg
      781 atgcgcgggc acaacctgcg caatttctgc cgcgaggtgc tggcccacct gcgcgatctg
      841 ctggtggtga aagtctcagc cgatccaaag attctcgatt cggcttcgac gcacgctgcc
      901 gcgctgaaac aacaggcgga acaattttcg gaatcagatc ttgtccggtt tttccattcg
      961 ctcgcggaaa cggaaagcac tttaaaggac gcggcgaacc cgcgttatca ggtcgaagtc
     1021 ggattggtga aactgatgga gatgcgacgg ctcgcgccgc ttggtgatct cgtcgaacgc
     1081 atcgccgcgc ttgaatcagc cttgcgaacg ggcaagggcc cggcggaaaa agcgagtctg
     1141 cgcacagaga cggcaacgcc aactatcaat cgcccgtcgc caaccgcgag caatgtacct
     1201 ttcgaatctg tcgcatcggc cgagacggca tcggctgaac cgtcagctgc gaaaacgaac
     1261 accttctgcg acaacgtgaa agcgaagctc aagcaaaagc gccggccatt gctcgtggcc
     1321 gcactcgacg gcgcggtgcg cgctgaactg gaaggtgacg aattcctggt tgagttcact
     1381 caggaaaaca aacactatcg caacactttg gcgcgcgccg ataacgcgaa agctttacgc
     1441 gaagcgtgcg ccgactcgtg cggccacgaa gtcggcatcc gttacatcat caaatctgaa
     1501 gacgacgctg tcgcttcaac ggacgtcacc ccggacgctc gcgaggccaa acagaaagct
     1561 cgtcgcgccg ctgccgcaga tccaaatgtc cagcaggtgc agcgcacgtt tggcgccgag
     1621 atcgttgacg tcaaacagac ctagtcacta aacgcaaagg aactggtctc tcgcgcatga
     1681 acccaacgcg acaatctctg ctcgggatgt gggcgttgct actgctcgtc tttctgacgg
     1741 ccgttgcggg cgcacaaccc tccacatcaa aaccaacccc aacggtctat ttgctgaagc
     1801 cggcgcgaat cttcgacggc gagtccgggc agcttcacac ggattgggtc gtgctcgtgc
     1861 gcggcgaaaa gatcgaggcc gttggtccgg cgagtgaaat caaagcaccc tccggtgcga
     1921 aggtgatcga gctgcgcggg atgactttga tgccggggct gatcgatgcg cattcgcacg
     1981 tgctgctcca tccgtacagc gaaacttcct ggaacgatca ggttgcgcgc gagagtctca
     2041 gtctgcgcgt ggcgcgcgcg acgaatcatc tgcgcagtag tttgatggcg gggtttacga
     2101 cgctgcgcga tctcggaact gaaggcgcga gctatgcaga tgttggtctg aagcaggcgg
     2161 tgcagcaggg aatcattccc gggccgcgct taatcgtgac gacccgcgcg atcgtcgcga
     2221 ccaacaccta cggaccgaag ggttacgcct ctgaatggag cgtgccgcag ggcgcggaag
     2281 aagccgacgg cgtcgacaac ctgacgcgcg tggtgcgcga tcagatcggc aaaggcgcgg
     2341 attggatcaa ggtgtacgcc gactatcgtt ggggcgcggg cggcacggcg cacgcgacgt
     2401 tcacgctcga cgaaatgaag ttaatcgtcg aggtggctaa gagcggcggc attcccgtcg
     2461 ccgcgcacgc cagttcaacc gaaggcgcgc gccgcgcgat tctcgccggc gtcgaaacga
     2521 tcgaacacgg tgacgggctg acgccggagc tt
//
LOCUS       DATDBY010000267         2575 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1048297, whole genome shotgun sequence.
ACCESSION   DATDBY010000267 DATDBY010000000
VERSION     DATDBY010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2575
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1048297"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..783)
                     /locus_tag="VIT19_04995"
     CDS             complement(<1..783)
                     /locus_tag="VIT19_04995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838372.1"
                     /translation="METAPYGSWKSPITSDLIVKGSIGLFQVRLDGDDIYWVELRPSE
                     GGRQVIVRRTPDGQMHDLTPREMNARTRVHEYGGGEYLIHKGDAFFSSFTDQQLYHQR
                     AGAAPRMITSDSAADAMRYADSVFDQKRNRLICVREDHTAKDREAVNTIVAVSLEGNE
                     PGEVLISGSDFYSSPRISPDGSKLAWLTWRHPNMPWDGSEVWIGELSADGSLNNQRCV
                     AGVGDESIFQPEWSPDGKLYFVSDAAGWWNIYRANDEGSVECI"
     gene            1076..>2575
                     /locus_tag="VIT19_05000"
     CDS             1076..>2575
                     /locus_tag="VIT19_05000"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY5838373.1"
                     /translation="MKNRSRLAALTLLALFATVLTDLPRPTAQTFRPVARGRRGVVAG
                     GHPLSVEAGMRMLQRGGNAVDAGVATILAASVIEFSHFSFGGEVPILIKMRGTGRTNR
                     GSSPAVREGVHKSDVVVIEGMGTAPAKATREFFANRSKEATASDRPTMPGGGSGVIPS
                     TGPLSATVPAVLDACVVALDQFGTKSLAEVMQPAIELADGFPLDELRVDYIKSRGPVL
                     SQWPDAKRIFLPNGQTPKVGDVFVQADLARTLRAIIAAEKRNAGKGRHAALMAARDHF
                     YRGPIGKRIGDYMQANGGLIAASDLAGWRATVGAPTRGDYRGYEIYKTGFWAAGPMLI
                     EVLNLLEGYDLKKLGHNSPEYIHTVTEALKLGFADRDRFYGDPKFVKIPAQQLLSKNY
                     AAMRRNLIEKERASLAQRPGDPENMKPLLASATTISYNAAPVPELLKANDTTCVNVID
                     KDGNMFSATPSGAWLPAVVAGDTGVLMGQRLQSALTDPNSPNVVAPGKRP"
BASE COUNT          550 a          726 c          764 g          535 t
ORIGIN      
        1 gatacactcg actgagcctt cgtcattcgc gcgataaata ttccaccagc ccgctgcgtc
       61 tgaaacgaaa tagagctttc cgtccggcga ccactctggc tggaaaatcg attcgtctcc
      121 tacgccggcc acgcagcgct ggttgttgag gctgccatct gcactgagct cgccaatcca
      181 gacttcggag ccgtcccagg gcatgttcgg atgccgccac gttagccacg ccagttttga
      241 gccgtcaggg ctgatgcgcg gacttgaata aaaatcactt ccggaaatca gtacctcacc
      301 cggttcgttg ccttcaagcg aaaccgcgac aattgtgttg acggcttcgc gatctttggc
      361 ggtgtgatcc tcgcgcacac aaatcaagcg gttgcgcttt tggtcaaaga cgctgtcggc
      421 gtaacgcatc gcatcggccg cgctgtcgct cgtaatcatc cgcggagctg cgccggcgcg
      481 ctggtgataa agctgctggt cagtgaagct tgaaaagaag gcgtcgcctt tgtggattag
      541 gtattcgcca ccgccgtatt cgtgcacgcg cgtgcgggca ttcatctcgc ggggcgtcag
      601 atcatgcatt tgtccgtccg gcgtccgtcg cacaatgacc tgccggccac cttctgacgg
      661 tcgcaattcg acccaataga tgtcatcgcc gtcgagcctg acctgaaaca atccgattga
      721 ccctttaacg ataaggtcag aggtaatagg cgatttccac gatccgtaag gcgcagtttc
      781 catggtttta tgtggcgagc cggaaaaagg gattatgggc ggaacgaaaa aaactgcaag
      841 agggccaggc acaaaagcaa gggcgccaac ctcccccaaa gttggcgccc tacccttcag
      901 tctcagttct cacaaggaga atcaatgaat gaacggatgc taaacccttt ctaaaggaca
      961 agggttgcag aagtattgcg acaaacttgt gaacatatgt tctctaaaag aatttgcact
     1021 gttgactgga cgaggccaga ggcatgagaa tcttccccga aatcgggggt gcttcatgaa
     1081 aaaccgttcg agactcgcgg ctctgacgct gttggctctg tttgccacag tgctgacgga
     1141 cttgccgcgc ccaactgcgc aaacctttcg gcccgtggcg cgcggccggc gcggcgtggt
     1201 tgcgggcggt catccacttt cagtggaggc cggcatgcgc atgctccagc gcggcggcaa
     1261 cgcggtcgat gccggcgtcg ccacgatttt ggcggcatcg gtgatcgagt tctcgcactt
     1321 ctcgttcggt ggcgaagtcc ccatcctgat caaaatgcgc ggcaccggcc ggacgaatcg
     1381 gggcagtagc ccggccgtca gggagggcgt gcacaaaagc gatgttgtag tgatagaagg
     1441 catgggcacc gcgcccgcga aagccacgcg cgagtttttc gcaaatcgga gtaaggaagc
     1501 cacggcctcg gatcgcccga cgatgccggg cggcggctcc ggagtcattc cgtcaaccgg
     1561 acctttgtcc gcgactgtac ccgcggtgct ggatgcctgc gtagtcgctt tggatcagtt
     1621 cggaacaaag tctttggcgg aagtgatgca gccggccatc gaactcgccg acggatttcc
     1681 gttggatgaa ttgcgcgtgg attacatcaa gtcacgcggt cccgttttgt cgcagtggcc
     1741 ggacgcgaag cgaatctttc tgccgaacgg ccagacgccg aaggttggcg acgtgtttgt
     1801 gcaagccgac ctggcgcgaa ctctgcgcgc gataattgcg gctgaaaaac gtaatgcggg
     1861 taaaggcagg cacgccgctt tgatggctgc gcgcgatcat ttttaccgcg ggcccatcgg
     1921 aaaacgcatc ggcgattaca tgcaggcaaa cggtggattg atcgccgctt ctgacttagc
     1981 tggctggcgc gctacggtgg gcgcaccgac gcgtggcgac tatcgcggtt acgagattta
     2041 caaaaccggg ttctgggccg ccgggccgat gctgattgaa gttttgaacc tgctcgaggg
     2101 ttatgatctg aagaagctcg gtcacaattc gcctgaatac attcacacgg tcactgaagc
     2161 tttgaagctg ggctttgctg atcgcgatcg gttctacggc gatccgaagt ttgtgaagat
     2221 tcccgctcag caacttctct caaaaaacta cgcggcgatg cggcgcaatt tgatcgagaa
     2281 ggaaagggca tcattagctc agcggccagg tgaccctgag aacatgaaac cgttgctggc
     2341 ttcggcgacg acaatttcct acaacgctgc gcccgtaccc gagttgttga aagcgaatga
     2401 cacaacctgc gtcaacgtca tcgataaaga cggaaacatg ttcagcgcca cgccgagcgg
     2461 cgcctggctg ccggcggtcg tcgccggcga taccggggtg ctgatgggtc agcgactgca
     2521 atccgctttg actgatccga acagcccgaa cgtcgtcgcg ccgggcaaac gcccg
//
LOCUS       DATDBY010000268         3760 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2045857, whole genome shotgun sequence.
ACCESSION   DATDBY010000268 DATDBY010000000
VERSION     DATDBY010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3760
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2045857"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..691
                     /locus_tag="VIT19_05005"
     CDS             <1..691
                     /locus_tag="VIT19_05005"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY5838374.1"
                     /translation="YCIGLTADFRDRPFDTVQAHVCKLMQVLRDWEFDSLLYLSSTRL
                     YGNELTTANEEDGFRFNTSNPSDLYHLSKAMGESITLSCGRKTRVARLSNTYGEDLNS
                     DNFLPSIIGDALAKRKVVLRTTPDSAKDYLSISVAVQGLIDIATRGRERIYNLASGVN
                     VSNGQLAQKLSHLTGCEVEFLPDAKTINFPVIDISRMQTEFGFQPSEVLSDLEELVDF
                     YRQHGGSGDLN"
     gene            678..1442
                     /locus_tag="VIT19_05010"
     CDS             678..1442
                     /locus_tag="VIT19_05010"
                     /inference="COORDINATES: protein motif:HMM:NF016850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CmcI family methyltransferase"
                     /protein_id="HEY5838375.1"
                     /translation="MISIDLEQGLVTVEENGSRLQHAIGSAEAFEVLSNAWLRSGWDN
                     KHVYSFTWFGRPIIQLPEDMVRLQEVIYAVQPDVIIETGIAHGGSLVFYASLCKAMER
                     GRVVGIDIEIRPHNRQALEAHPLSPLITLIEGSSIDPEVVSRVRAQVQPGETVLVLLD
                     SCHTRQHVLDELNAYSPLVTAGSYIVAMDGIMEQVSGAPRTQADWTWNNPRAAALEFV
                     AAHPEFIIDDPQFRFNESNISKAVTYWPSGYIKRVG"
     gene            1489..2412
                     /locus_tag="VIT19_05015"
     CDS             1489..2412
                     /locus_tag="VIT19_05015"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY5838376.1"
                     /translation="MSIGLPVYNGERYLRRALDCLLAQDYPHFELLISDNASSDQTRQ
                     ICEEYGARDARINLKVNESNAGIIANFQLVLDRARGKYFMWAAHDDTWARTFVGVMVH
                     ELENHPDAAVAMSGVERVHENGTPHDVVRHAGRTDPNRINMLQLALALAEGTPHHLFI
                     YGLFRTEFLRQAFHNFPRVIAADRLMMIQAALSARFRYVDEVLHTRYINEDPIPVRYH
                     NDEFGQAWHDRHRYLKKELALGPYLFRSRMIPWQRKLWIPLIVIWSWLKRLYHGRFRF
                     VYWLAGKIVGRGGRRKNIARYLRRLVHMGSR"
     gene            2422..3480
                     /locus_tag="VIT19_05020"
     CDS             2422..3480
                     /locus_tag="VIT19_05020"
                     /inference="COORDINATES: protein motif:HMM:NF015087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase family protein"
                     /protein_id="HEY5838377.1"
                     /translation="MERALQIESTLINDASDCYVIAEIGHNHQGNIETAKELFRAAKE
                     CGAHAVKLQKRDNRLLYTREMFNKPYENENSFGATYGEHREFLEFGKEEYQELQEFAA
                     ELGLAFFATAFDFHSADFLAELNTPAFKIASGDLRNIPLLKHVAGYQKPVIVSTGGGT
                     IDDVQRAYDSVMPINPRLAILQCTAGYPCAFEEMNLRVISTFRERFPDIVIGLSSHDS
                     GIAMAVAAYILGARIVEKHFTLNRAMKGTDHSFSLERGGLRRVVRDLKRARVALGDGV
                     KATYPSEVAPLLKMGKKLVAASDLPANHVIRPEDVAIKSPSDGLQPFELDRVIGKVTR
                     RALKEDENISFEDVDGNS"
     gene            3477..>3760
                     /locus_tag="VIT19_05025"
     CDS             3477..>3760
                     /locus_tag="VIT19_05025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838378.1"
                     /translation="MTDNSRLLDAASLARIIRTIRLIAFDFDGVFTDNSVYVFEDGRE
                     AVRCTRSDGMGLAKLTALGIATVVISTEPNPVVSARSRKLKIDCIQDCAD"
BASE COUNT          863 a          964 c         1088 g          845 t
ORIGIN      
        1 ttactgcatc ggattaacgg ctgacttccg agatcgtccc tttgacaccg tgcaggcgca
       61 tgtctgtaaa ctgatgcagg ttttaagaga ttgggagttt gattcgctcc tgtacctgtc
      121 ttcgactcgt ttatatggaa atgagctgac gacggccaac gaggaggatg ggtttcgatt
      181 caacacatcg aatcccagcg atttatacca tttgtcaaag gcgatgggag aatcgatcac
      241 gctatcgtgc ggccggaaaa cacgcgtggc caggttgtct aatacttatg gtgaggattt
      301 gaactcagat aattttctcc cgtcgattat cggtgacgct ctggccaaac gtaaggtagt
      361 gctgcgcacg acgcctgact cagcgaagga ctatctaagc attagcgtcg cggtgcaggg
      421 tctaatcgac atcgccacgc gaggcaggga acgaatttac aatcttgcca gcggcgtgaa
      481 tgtttcaaat ggacagcttg ctcaaaaact gagccacctt accggatgcg aggttgaatt
      541 cctcccggac gcgaaaacaa ttaactttcc agtgatcgat atcagccgca tgcaaacgga
      601 atttggtttt caaccgtccg aagtgcttag cgacctggaa gagcttgtgg atttctatcg
      661 gcaacacgga ggctcaggtg atctcaattg atctcgaaca gggcctggtt acggtcgaag
      721 aaaatgggag ccgccttcag cacgcgattg gcagcgccga ggcttttgaa gtgctgtcga
      781 acgcgtggct gcgaagcggc tgggacaaca agcacgtcta cagcttcacc tggttcggcc
      841 ggccaataat tcaattgccg gaagacatgg tccggttgca ggaagttatc tacgcggtcc
      901 agcccgacgt aattattgag acgggcatag cacacggcgg ctctttagtt ttttatgcaa
      961 gcctttgcaa ggccatggag cgcgggcgcg tcgtcggcat cgacatcgaa atccggccgc
     1021 acaaccgcca ggcgcttgaa gcgcacccgc tgtctccgct aatcacattg atcgaaggca
     1081 gctcgataga tccagaagtc gtaagccgcg ttcgggcgca agtacagccc ggcgagactg
     1141 tgctggtctt gctggattca tgccacacca ggcagcatgt tctggatgag ttaaatgcct
     1201 actcgccgct ggtgacggcg ggctcatata tcgtggcgat ggatggcatt atggaacagg
     1261 tctccggcgc gccgcgcacc caggccgatt ggacgtggaa caatccacgg gcggcagcgc
     1321 tcgagttcgt ggcggcccat ccggaattta taattgacga cccgcagttc aggtttaatg
     1381 aaagtaatat ttcaaaagcg gtgacctatt ggcccagcgg ttacattaag cgcgtcgggt
     1441 gataatccga tagagcacga cgaaacagtt ttggaaacaa cgccactagt gagcataggt
     1501 ttgccggtct ataacggcga acgatatttg cgcagggccc tggactgttt actggcccag
     1561 gactaccccc attttgagtt gctgatttcc gataacgctt ccagcgatca gaccaggcag
     1621 atctgtgaag agtacggcgc cagggatgcg cggataaact tgaaggtcaa cgagtcaaac
     1681 gccggcatca ttgccaattt ccaactcgta ctcgatcgcg cgcgcggcaa gtactttatg
     1741 tgggccgcgc atgacgacac gtgggccagg acattcgtcg gcgtgatggt ccacgagctg
     1801 gaaaatcatc ccgacgccgc cgtggccatg agtggcgtgg agcgcgtcca tgaaaacggc
     1861 acgccgcacg acgtagtgcg acacgcaggt cgcacagatc ccaaccggat caacatgttg
     1921 cagctggcgt tggcgctcgc tgagggcacc ccgcatcatt tgttcatcta tggattgttc
     1981 cgcaccgagt tcttgcgaca ggcgtttcac aattttccgc gggtgatcgc cgcggaccgt
     2041 ttgatgatga ttcaggcagc gctgagcgcg cgatttcgct atgtcgatga ggtcctgcac
     2101 acgcgataca tcaacgaaga tccgattccg gtgcgttacc acaacgacga gttcggccag
     2161 gcctggcacg atcgacatcg gtacctcaag aaagaattgg cccttggacc atatctcttc
     2221 cggtcgcgaa tgatcccgtg gcaacgcaaa ctttggattc cgctgatcgt tatctggtcg
     2281 tggctgaagc ggctctacca tggccgtttt cgatttgtgt attggctggc cggaaagatc
     2341 gtgggtcgcg gtgggcggcg aaaaaatata gctcgttatc tcagacgttt agttcatatg
     2401 ggttccagat agggagatcc gatggagcgc gcgttacaaa tcgaatcaac actaatcaat
     2461 gatgccagcg actgctatgt gatagctgaa attggccaca accatcaggg gaatattgaa
     2521 acagcgaagg agttgtttcg cgcggccaaa gaatgtggcg cgcacgccgt taagttacag
     2581 aagcgagaca accgcttgtt gtacacgcgc gagatgttca ataagccgta cgagaacgag
     2641 aatagtttcg gcgcgacata cggtgagcac cgtgagttcc tggagttcgg caaggaagag
     2701 tatcaagagc tacaagaatt cgcggcggag ctggggttgg ccttttttgc gacggctttt
     2761 gattttcaca gcgccgattt tctggctgag ttgaacacgc ccgcgttcaa aattgcttcc
     2821 ggagatttgc gaaacattcc gttgctgaag catgtcgcgg gttatcaaaa accggtgatc
     2881 gtcagcacgg gcgggggtac gattgacgac gtgcagcgtg cctacgactc ggtcatgccc
     2941 attaatccgc gactggccat cctgcaatgc accgccggtt acccttgtgc cttcgaggaa
     3001 atgaatctgc gggtcatctc aacgttccgc gagcgctttc ccgatatcgt gataggtttg
     3061 tcatcccatg acagcgggat tgccatggcc gtcgccgcgt atattctggg cgcgcggatt
     3121 gtggaaaaac attttacgct caaccgcgca atgaagggca ctgatcattc cttctcgctt
     3181 gagcgggggg gcttgcgacg cgtggtccgt gatttgaaac gcgcacgcgt ggccttagga
     3241 gacggcgtga aagcaacgta cccgagcgaa gtcgcgccgt tgttgaagat gggaaagaaa
     3301 ctcgtagcgg cgtcagatct gcccgcgaat catgtcattc ggcccgagga cgtcgcgatc
     3361 aagtcgccaa gcgacggcct tcagccattc gaattggacc gcgtcatcgg caaagtgacc
     3421 cgaagggcgt tgaaagaaga cgagaacatt agtttcgaag atgtggacgg taacagttga
     3481 ccgataactc tcgcctgctt gacgctgcat cgcttgccag gatcattcgc accatccggc
     3541 tgatcgcttt tgattttgac ggcgtgttca cagacaactc ggtttacgtc tttgaggacg
     3601 gtcgcgaggc tgtaaggtgt acgcgtagtg acggcatggg cctggcgaag cttaccgcgc
     3661 tggggattgc caccgtcgtc atctcgaccg agccgaaccc agtagtttcc gcgcgcagtc
     3721 gcaagctgaa gatcgattgc attcaggatt gtgcggacaa
//
LOCUS       DATDBY010000269         2065 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2051667, whole genome shotgun sequence.
ACCESSION   DATDBY010000269 DATDBY010000000
VERSION     DATDBY010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2051667"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2065
                     /locus_tag="VIT19_05030"
     CDS             <1..>2065
                     /locus_tag="VIT19_05030"
                     /inference="COORDINATES: protein motif:HMM:NF013166.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY5838379.1"
                     /translation="PHVAVNRLIFNTNYVEITSGDRIAQASNASFDAATFEIWGALLH
                     GAQLIGIPRDLTLSPRRFAEELRRQQISMMFLTTALFNQIARDVPDAFATLRQLMFGG
                     EAVDVGAVRQIVTHGPPQRLVHVYGPTESTTFATAYLVESVSADATTIPIGRAISNTQ
                     TFILDTNLNPVPVGVPGDLYLGGDGLAREYLNHAELTNEKFVANPWKAGERLYKTGDV
                     ARFRPDGNIEFVGRKDHQVKLRGFRIELGEIEAALAEHPFVAECIVNLVEGEYGDKRL
                     IAYFVSTVMDEAHASDLRDFMRNKLPEYMLPTAFVRLESLPLSPNGKIDRRALPVPET
                     TEAAATSKYVPPRDELELKLSKIWEKVLPVRPIGVNDNFFDLGGHSLLAVRMFSLIEK
                     SLERNLPLATLFQAPTISALAEVMRGESWPAAWSSLVVINGGGTQRPFFCIHAAGGNV
                     LEYYDLARHLGPDQPFYGLQAQGLDGKEEPHTNIREMAAHYIKEMRDVQPEGPYFIGG
                     RSSGGTIAFEMACQLKAAGEEVALLALLDTYPAGYFKLFPQSTRGRMQQTLERVRAHV
                     ANLSELGFAAKLTYVATKLKYGPAKIKHKAYRRAYKLYQRIGRPLPTVLKNIEELNFM
                     AAREYLPQVYSGRATLFSATDLTASFDVEDGWRQLVTELEVHQIPGNHLDMIKEPHVQ
                     VLAEKL"
BASE COUNT          443 a          605 c          593 g          424 t
ORIGIN      
        1 ccgcacgtgg ccgtcaatcg gctcatcttc aacacgaact atgtcgagat aacttccgga
       61 gatcgaatcg cgcaggcatc gaacgcttca ttcgacgcgg cgacctttga aatctgggga
      121 gcgttacttc acggcgcgca gctcatcgga attcctcgtg acctgacttt gtcgccaagg
      181 cgtttcgcgg aagagcttcg tcgtcaacag atctcgatga tgtttttgac aaccgcgctc
      241 ttcaaccaga ttgcgcgcga cgtgcccgac gcgtttgcca cactgcggca actgatgttt
      301 ggcggtgaag ccgttgacgt cggcgccgtg agacagatcg tgacgcacgg accgccccag
      361 cgtctggtgc acgtctacgg acccactgaa agtacgacct tcgccactgc gtacctggtt
      421 gaatcggttt ccgcggatgc gacgacgatt ccgattggcc gcgccatctc gaacactcag
      481 actttcattc tcgacacgaa tctaaatcca gtgccggtcg gagtgcctgg cgatctatac
      541 ctcggcggcg acggattggc gcgcgaatac ctcaatcacg ctgaactgac gaacgaaaag
      601 tttgtcgcga acccctggaa ggccggtgaa cggctctata aaacaggcga cgtcgcccga
      661 ttccggccgg atggcaacat cgagttcgtc ggccgcaagg atcatcaggt gaagcttcgc
      721 ggatttcgga tcgagctcgg cgagatcgaa gctgcgctcg ccgaacatcc gtttgttgcc
      781 gagtgcatcg tgaacctcgt ggagggcgaa tacggcgaca aacgtctaat cgcttatttc
      841 gtctcgaccg tgatggacga agcgcatgcc agtgaccttc gcgatttcat gcgcaacaag
      901 ctgcccgaat acatgctgcc gacggcgttc gtgcggctcg agtctctgcc tttgtcgccc
      961 aacggaaaaa tcgatcgccg cgctttgcct gtgcctgaaa caactgaagc ggcagcaact
     1021 tcgaagtacg ttccgccgcg cgacgaactc gaactgaagc tttcaaagat ctgggaaaag
     1081 gttctgccgg tgcggccgat cggcgtgaat gacaacttct tcgatctcgg cggtcactcg
     1141 ctgctggcgg tgcgaatgtt cagcctgatc gaaaaatcgt tagagagaaa tctgccgctg
     1201 gcgacgttgt tccaggcgcc cacgattagc gcgcttgccg aagtgatgcg cggggaatcc
     1261 tggccggcgg cgtggtcatc gctcgtcgtg attaacggcg gcgggacgca gcgtccgttc
     1321 ttctgcattc atgcggcggg cggaaacgtg cttgagtact acgatctcgc gcgacacctt
     1381 ggtcccgatc agccgtttta cggattgcag gcgcagggcc tggacggcaa agaagagccg
     1441 cacaccaaca ttcgcgaaat ggccgcgcat tacattaaag agatgcgcga tgttcagccg
     1501 gaagggcctt acttcatcgg cggacgctcg tcaggcggca ccatcgcctt cgaaatggct
     1561 tgccaactga aagcagccgg cgaagaagtg gcgctgctcg cgctgctcga tacctatcca
     1621 gccggctact tcaagctgtt cccacagtca actcgcggtc gtatgcagca aacgttggaa
     1681 cgcgttcgcg cccatgtcgc caacctgagc gaactcggtt tcgccgctaa gctcacttac
     1741 gttgcgacca aactcaaata cggcccggcg aagatcaaac acaaagcgta tcggcgcgcc
     1801 tacaaactgt accagcgcat cggccggccg ctgccgacgg ttttgaagaa catcgaagag
     1861 ctgaatttca tggcggcgcg cgagtacctg ccgcaggttt actccggacg cgcgacactt
     1921 ttttcggcaa ccgatttaac ggcttcgttt gacgttgagg acggctggcg acagctcgta
     1981 actgagttgg aagttcacca gattcccggc aatcacctgg acatgatcaa ggaaccgcac
     2041 gtgcaggtgc tggctgagaa gctac
//
LOCUS       DATDBY010000270         2059 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_25469, whole genome shotgun sequence.
ACCESSION   DATDBY010000270 DATDBY010000000
VERSION     DATDBY010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25469"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            228..1124
                     /locus_tag="VIT19_05035"
     CDS             228..1124
                     /locus_tag="VIT19_05035"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEY5838380.1"
                     /translation="MALASTLVAAQTNGANGANRGNEVHLLESGKAKTLADPPRANEL
                     KIVSYNIRWRSGKELQQIIRWLKDAGSVRPAIIGLQEVDRARERSGNANHAKGIADEL
                     GMYYAWTAPHATKSGKREEETGVAILSPYPLTEVTRIVLPNPGPGGRLRVAIGATAQI
                     GKTLVRVYSVHGETRLTERKKVEQQRAVLDDLQKFPKAMPVIILGDFNTWEAPAVKDT
                     RKLFTTAGFETPFPDDESTFSTRIVLFNLKLKLDWIWVRGLTPASYGIDRGLKVSDHF
                     PLWTVVTLPAATRTGPDNPGTQ"
     gene            complement(1289..>2059)
                     /locus_tag="VIT19_05040"
     CDS             complement(1289..>2059)
                     /locus_tag="VIT19_05040"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY5838381.1"
                     /translation="LTVPRVVLTDAMKAAIENRPELRQSDLVREINQLDQKLHRELTK
                     PQIDFVGSYGMVGNAGALTSAANPFSSSNDALRARVNELSTLNGLQPLPAPPTVAIPP
                     DLIGGYPRSLGNLVTNDFNNFRVGVTFSFPLRNRTAEGQLAHSLIEGKRIATQRQQLE
                     QLIQVEVRNALQSVTTAEARLRSAAVARENAEQQYASEKRKLDVGQSTVFLVLERQTA
                     LTITRGNELRAQTDLNKAIAELQRATGNSLVANNVNLK"
BASE COUNT          445 a          571 c          623 g          420 t
ORIGIN      
        1 gcagacgcac ctgaacctcg ctgaggcgat gcggattgcg caaatggctg agccccgcag
       61 gctcttgctg acgcatttgt atccggagtg ggacgcgatc gacttgccgg cgaaggcgcg
      121 tgaactttgg ccgggcgaaa cgatcgccgc acgcgatggc ctacaaattg aaatctaaaa
      181 ttttgccaat gacaattctt tcaactttct tgctaacttt agccgtgatg gctctggcct
      241 caaccttggt ggcggcgcaa accaatggag caaatggcgc aaatcgggga aacgaagttc
      301 acctgctcga atcaggaaag gcaaaaacgt tagccgatcc gccgcgcgca aacgaactca
      361 agattgtctc gtacaacatc cgctggcgca gcggcaaaga gcttcagcaa atcattcgct
      421 ggttgaaaga cgcaggatct gtgcggccgg cgatcattgg cttgcaggaa gtcgaccgcg
      481 caagggaacg cagcggcaac gcgaaccacg cgaagggaat cgcggatgag ctggggatgt
      541 attacgcctg gacggcgccg cacgcgacga aatccggaaa gcgagaggaa gagaccggcg
      601 tcgcgattct cagtccttat ccactcaccg aggtgacgcg aattgttttg ccgaaccccg
      661 ggcctggagg ccgattgcgc gttgcgatcg gcgcgacggc gcagattggc aagaccctcg
      721 tgcgggtgta ctcagtgcac ggcgaaacgc gtttgacgga acgtaagaag gtggaacagc
      781 agcgcgccgt actggatgac ttgcagaaat tcccaaaagc gatgccggtc atcatcctcg
      841 gggatttcaa cacctgggag gcgccggcgg ttaaagacac tcgcaagcta ttcacgaccg
      901 ccggcttcga gacgcctttt ccggacgatg aatcgacgtt ttcaaccagg attgtactgt
      961 tcaatttgaa actgaaattg gactggattt gggtgcgcgg actgacgccg gcaagctacg
     1021 gcatcgaccg tggcttgaag gtttcagatc actttccgct gtggaccgtg gtgacgcttc
     1081 cggccgcaac tagaaccggc cccgataatc cggggactca ataacgccgc gtccgagtat
     1141 gttttcagtc acatcgaact agcgcagggt cagttcccac ccagtctgaa ttgcgggcgt
     1201 tacgccggaa gtttcaatca acttctgcac gaacgccgcc tcggggcggg ttgggtgctt
     1261 atgaatgatg aggacgccga gacgctgact acttcaaatt cacgttgttc gccaccaatg
     1321 aattccccgt cgcacgctgg agttcggcga tggccttatt taagtcggtc tgcgcgcgga
     1381 gttcgttgcc gcgagtaatc gtcagagcgg tttggcgttc gagcacgagg aaaacggtcg
     1441 attggccaac gtcgagcttc cgcttctcgc tggcgtactg ctgctcagcg ttttcacgcg
     1501 cgaccgcggc agagcggaga cgggcttccg cggtagtgac ggactgcaaa gcgttgcgga
     1561 cttcgacttg aatcagttgc tcgagctgct gccgttgcgt cgcgatccgc ttaccttcaa
     1621 tcaacgagtg cgcgagttgg ccttccgcag tgcggttgcg caggggaaag ctgaacgtca
     1681 cacctacgcg aaagttgttg aagtcgttgg tcacgagatt gccaagcgag cgcggatagc
     1741 cgccaatcag gtcaggcggg atcgccaccg tcggtggtgc cggcaaaggc tgcaaaccgt
     1801 tcagtgtgga gagttcattc acgcgcgcgc gcaacgcgtc gttgctcgag ctgaacgggt
     1861 ttgccgccga agtgagcgcg cccgcattgc ccaccatccc atagctgccg acgaaatcga
     1921 tctgcggttt cgtgagctcg cgatgcagct tctggtcgag ttgattaatc tctctcacga
     1981 gatctgactg tctcaactca ggccggttct caatcgcagc tttcatcgca tcagtcagca
     2041 cgacgcgcgg cacggtgag
//
LOCUS       DATDBY010000271         2526 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2677906, whole genome shotgun sequence.
ACCESSION   DATDBY010000271 DATDBY010000000
VERSION     DATDBY010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2677906"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1430)
                     /locus_tag="VIT19_05045"
     CDS             complement(<1..1430)
                     /locus_tag="VIT19_05045"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HEY5838382.1"
                     /translation="MATEVVMPQMGESIAEGTITKWLKNVGDHVERDEPLFEISTDKV
                     DAEIPSPAAGTLTDIKHKEGETVEVNTVVAVLDGDGAKSEPAAPAASAEQTEATTETA
                     EQVQATTETAEATDQETPAPAEQPAPQAAPPPSPQIERPKPAITTAERGAPAAPAGKT
                     EVKPLHRRDEVAHKAPAAAPAPTGDDGGATSAEDLRRTKSSPLVRKIAEEHGIDIAQL
                     EGTGMSGRVTKNDILSFIESGAPAPAQRPAAPQVAQQPSAPSTQPVSVLKPGEGDRVE
                     QMSVMRKKIAEHMIASRRTSAHVTTVYEIDMTRVAKLRDEHRKGFEERTGTKLTYMPF
                     IFKAITDAIRKFPIFNSQVSGDQIIYKRDINLGMAVALDAGLIVPVIKRADDLSISGL
                     ARAANDLADRARTKQLKPDEVAGGTFTITNPGGFGGLFGTPIINQPQVAILGVGKIEK
                     RPRVLTTPEGEDYIAIRYMAFFALSF"
     gene            complement(1540..1836)
                     /locus_tag="VIT19_05050"
     CDS             complement(1540..1836)
                     /locus_tag="VIT19_05050"
                     /inference="COORDINATES: protein motif:HMM:NF025392.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HEY5838383.1"
                     /translation="MPKYVIEREIPGAGSLSPQDLQGIAQKSCNVLQNLGPQIQWVES
                     YVTADKVYCVYIAPSEDMIRAHAQQGGFPANRISEIKTTIDPTTAEAQENAAAA"
     gene            complement(1944..>2526)
                     /locus_tag="VIT19_05055"
     CDS             complement(1944..>2526)
                     /locus_tag="VIT19_05055"
                     /inference="COORDINATES: protein motif:HMM:NF014799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEY5838384.1"
                     /translation="FFLNTAGLKIVEPSTAYDAKGLIKAAIRDPDPVLYFEHKKLYRL
                     PRLREELPEDDYIVEIGKARTAREGRDVSIITFGAQVLTALDAAEELEKEGLDVEVID
                     LRTLAPLDKEAILASVKKTSRALILHEASLTGGIGGEISAIISQEAFEWLDAPVVRVA
                     SLDTPVPYSPPMEDYYLPQVNDVLNAARKLAAY"
BASE COUNT          453 a          738 c          719 g          616 t
ORIGIN      
        1 tcgaaactca acgcgaaaaa agccatgtaa cgaatcgcga tgtagtcttc gccttcgggc
       61 gtggtgagca cccggggccg cttttcgatt ttgccgactc cgagaattgc cacctgtggc
      121 tgattgatga tgggcgtgcc gaacaacccg ccgaaaccgc cgggattggt gatcgtgaaa
      181 gtgccgccgg ccacctcgtc cggcttgagt tgtttcgtgc gcgcgcgatc ggcgagatcg
      241 ttggcggcgc gcgccagacc tgaaatcgaa agatcgtcgg ctcgtttgat caccggaacg
      301 atcagacctg cgtccagcgc caccgccatt cccagattga tgtcgcgctt atagataatc
      361 tgatcgccgc tgacttgcga gttgaagatc gggaacttgc gaatcgcgtc agttatggct
      421 ttgaagatga acggcatgta cgtcagcttc gtgccggtgc gctcctcaaa ccctttacgg
      481 tgttcgtcgc gcaacttggc gaccctggtc atatcgattt cgtaaaccgt cgttacgtgt
      541 gccgacgtgc gtcgcgaggc aatcatgtgc tctgcgatct tcttgcgcat cacactcatc
      601 tgctcgacgc gatcgccttc gccgggtttc aagactgaga ctggctgagt gctgggcgct
      661 gaaggttgct gggcaacctg tggcgcggcc ggtcgttgcg cgggcgccgg cgcgcccgac
      721 tcaataaagc tcagaatgtc gttcttggtg acgcgcccgg acatgcctgt gccttcgagt
      781 tgggcgatgt cgatgccgtg ctcttcggca atcttgcgca cgagcggact ggatttcgtt
      841 cggcgtaaat cttcagcgga cgtcgcgccg ccatcatcgc ccgttggagc aggcgcagct
      901 gctggcgctt tgtgagccac ttcatctcgg cggtgcaaag gcttaacttc agtcttaccg
      961 gctggtgccg ccggcgcgcc gcgctcggcg gtggtgatcg ccggcttcgg gcgttcgatt
     1021 tgcggagacg gcggtggcgc agcttgggga gcaggttgtt cggccggcgc cggcgtctct
     1081 tgatctgtcg cctcagccgt ttcggttgtg gcttgtactt gctcagcggt ctcggttgtc
     1141 gcttcggttt gttcagcact cgctgcgggt gcagccggct cggactttgc cccgtcgcca
     1201 tccagcaccg cgaccacagt attcacttca actgtctcgc cctctttgtg cttgatgtcc
     1261 gtgagcgtgc ccgccgcagg cgaaggaatc tcggcatcaa ccttgtcggt cgagatttcg
     1321 aacagcggct catcacgttc gacgtggtcg ccgacgttct tcagccattt tgtgatcgtg
     1381 ccttccgcga tggattcgcc catctgcggc attactactt cagtcgccat ggtatttagt
     1441 ccggtgtccg ttgtcagtgg ttagtagtca gttgtgcgaa gacccgattc gccagtctgg
     1501 attccaactg acgactgaca actgacgact gacgtctttt tacgcagccg ccgcgttctc
     1561 ttgtgcttcc gccgtcgtcg gatcgatcgt tgttttgatt tcggaaatcc gattcgccgg
     1621 gaagccgccc tgctgtgcgt gcgcgcgaat catgtcttcg ctcggcgcga tgtacacgca
     1681 gtaaaccttg tcggccgtga cataactttc aacccactga atctgcgggc cgaggttctg
     1741 gagcacgtta caggatttct gtgcgatccc ctgtaagtcc tgcggcgaca aactacccgc
     1801 gcctggaatt tctcgttcga taacatattt cggcatgatg ttctcctggg aattctgcta
     1861 gacaggattt acaggatcta caagatttga atgaaagaca atttcaaagt gcttatcctg
     1921 tcaatcgtgt aaatcctgtc tactcaataa gccgccagct ttcgcgcggc attcagtacg
     1981 tcgttcacct gcggcaaata atagtcttcc atcggcggtg aatacggcac cggcgtgtcg
     2041 agcgacgcaa cgcgcaccac cggcgcatcg agccattcaa aagcttcctg ggaaatgatc
     2101 gccgaaatct cgccgccaat tccgccagtc aaggaagctt cgtgcaggat cagcgcgcgg
     2161 ctcgtcttct tcacgctcgc gagaatcgct tccttgtcca acggcgcgag tgtgcgcaga
     2221 tcgatcactt cgacgtcgag gccttccttc tccaactctt cggccgcatc gagcgccgtt
     2281 aagacttgcg ctccgaaggt gatgattgag acatcgcggc cttcgcgcgc cgtacgcgct
     2341 tttccgattt cgacaatgta gtcgtcttcc ggaagctctt cacgtaaacg cggcagacgg
     2401 taaagcttct tgtgctcgaa atagagcacc ggatccggat cgcgaatcgc ggctttgatc
     2461 aaccccttcg catcgtacgc ggtcgaaggc tcaacgattt tcaatccggc cgtgttcagg
     2521 aaaaac
//
LOCUS       DATDBY010000272         3783 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_5612, whole genome shotgun sequence.
ACCESSION   DATDBY010000272 DATDBY010000000
VERSION     DATDBY010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3783
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5612"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1502
                     /locus_tag="VIT19_05060"
     CDS             <1..1502
                     /locus_tag="VIT19_05060"
                     /inference="COORDINATES: protein motif:HMM:NF013538.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838385.1"
                     /translation="LQNAHPQVSIEYSFHESLGDKNQNDPLWQMPEKGVFTQDLREGL
                     LAGQYDLAVHSWKDLAIEDDGETVISATLPRADMRDLLLVRRDRWEEVRRTGRMTILT
                     SSPRRSYNLDSFLRTALPTRIEELIFEPVRGNVPTRVRKMWNPGADGLIVAKAALDRL
                     LEAPEEEFAATKVPLRKALSQCLWMVLPLRANPCAPAQGALAVEIKSSRPELRERLEA
                     INCAETFATTQRERDILRGYGGGCHQKIGASVLRRPYGEITFLRGLTDDGAALNDYHL
                     SASRPRPARVERNLLWPLKPADADWFTREPIPATISDSAMWIAKADALPQDASISDSQ
                     LVWASGLKTWERLAQRGVWVNGCAEGLGEHEHPRIETIAGTAVQWTKLTHSDAGSAGT
                     RGPRPGSPAGVLILPASGSFENGMQTLPTYRLVPKDASPNIEGKHYFFWTSGSSFERA
                     LSLNPWIKSMTHFCGPGNTQKALQQHGIEPHVFLDHEQWLREMCQYRER"
     gene            1636..2586
                     /gene="hemB"
                     /locus_tag="VIT19_05065"
     CDS             1636..2586
                     /gene="hemB"
                     /locus_tag="VIT19_05065"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF006762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEY5838386.1"
                     /translation="MKRLMRLRATQHLRDLCAETNFNRAQLIQPFFVVEGLKADEPIA
                     GLRGNVRLSVSSALRQIESDLNDGVTHFLLFPVPGNKREKDFDHQFERDVISQIRNQF
                     GSNLCLWVDTCLCAYTTHGHCAVLNDKGIDHPTTLDELANSALAFTEAGADGISPSDM
                     MDGRVGRIRAQLDENGFDLVPVMSYSTKFASNFYGPFRAAADSAPQFGDRKGYQLDVR
                     NRTDALASSRRCAEEGADLLMVKPGMTSLDLIAPINEETGLQVGAYQVSGEYAGISLL
                     ADNGLIDFERGLLETWHVFKRAGAQFIITYGARYANKLGI"
     gene            2598..>3783
                     /locus_tag="VIT19_05070"
     CDS             2598..>3783
                     /locus_tag="VIT19_05070"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: protein motif:HMM:NF000818.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEY5838387.1"
                     /translation="MAERRGDTALDRHHETTLSNSQTSKAPSPLRSAGALHSDLFERS
                     LQLSPGGVHSPVRAFKSVGGTPIFFRSAQGAILTSVEGDDYIDFCQSFGPLMLGHRDP
                     EVAEVVREAIETAWSFGACEPYSLELAEWITSRVPWVEMLRFVSSGTEAVMSALRVAR
                     AATGRARILKFEGCYHGHADSLLVKAGSGLAGVAASSSAGVSESVASETLVASLDDEE
                     SVRAVFDGHGSEIAAVILEPQPANYGLLIQRREFIEETVNLARRHGALVIFDEVISGF
                     RVAMGGMAEVLGMRPDLVTYGKVIGGGFPVGAYGGRRDLMEMVAPSGPVYQAGTLSAN
                     PVGMRAGLATLQKIERVGAFETLEKRTAQFCDRLNATFDDRDLPVQITRTASLFWLHA
                     KTA"
BASE COUNT          791 a         1050 c         1169 g          773 t
ORIGIN      
        1 ctctccaaaa cgcacacccg caagtcagca tcgagtattc ctttcacgaa tcgctcggcg
       61 acaagaatca aaacgatccg ttgtggcaga tgcctgagaa aggtgtcttc acccaggacc
      121 tgcgcgaagg tctgctcgcc ggccaatacg atctggccgt gcactcatgg aaagatctcg
      181 cgattgaaga cgacggcgag actgtaatct cggcaacact accgcgcgcc gacatgcgcg
      241 atctgttgtt ggtgcgaaga gatcggtggg aagaagttcg gcgcaccggg agaatgacga
      301 ttctcacttc ctcgccgcgc cgcagttaca acctcgattc gttcttgcga actgccctcc
      361 ccacacgaat tgaggaactg atatttgagc cggttcgcgg caacgtgccg acgcgggtgc
      421 gcaaaatgtg gaatccggga gcggacgggt tgattgtcgc caaagccgcg ctcgatcgtc
      481 tgttggaagc gccggaagaa gagttcgcgg ccacgaaagt tccactgcga aaggctttgt
      541 cgcaatgcct gtggatggtt ctgccgttgc gcgccaatcc ctgtgcgccg gcgcagggcg
      601 cgctcgccgt tgagatcaag agcagccgtc cggagttgcg tgaacggctg gaggcaatta
      661 actgtgccga gacattcgcg acaactcagc gcgagcgcga cattctgcgc ggctatggcg
      721 gcggttgtca tcaaaagatc ggagccagcg tcttgcgccg gccttacggt gaaattacct
      781 ttctccgcgg cctaacagat gatggcgcgg cattgaatga ctatcacttg tcagcttccc
      841 gcccgaggcc cgcgagggtc gagcgaaatt tgctgtggcc gctcaagcct gcggacgctg
      901 actggttcac acgtgagccg atacctgcga caatatcgga ttcggctatg tggattgcca
      961 aggcggatgc gttgccgcag gacgcttcca tctcggattc gcagctggtt tgggcgagcg
     1021 ggctgaagac atgggaacgc ctggctcaac gcggagtgtg ggttaatggc tgcgcggaag
     1081 gactcggcga acacgagcat ccgcggatcg aaacgattgc cggaaccgca gtgcaatgga
     1141 caaagctgac gcactcagat gctgggagcg cgggcacgcg gggtccccgg ccgggcagcc
     1201 cggctggggt gctcatcttg cccgcatctg gttcctttga aaatggaatg caaacattgc
     1261 cgacgtatcg tctggttccc aaagacgcaa gtccgaacat cgaaggcaaa cactactttt
     1321 tctggacgag cggatcgagt ttcgaacgcg cgttgtccct gaatccatgg ataaaatcga
     1381 tgacgcattt ctgtggaccg ggcaacacac agaaagctct gcaacaacat ggcattgagc
     1441 cgcatgtgtt ccttgatcac gagcaatggc tacgagaaat gtgtcagtac cgggagcggt
     1501 agcgaccggt attcccccct ctccgcaagc ggagaggggg acagggggag aggtggcgcg
     1561 acctaacccc accccaaccc ctccccgcgg gcggggaggg gcaaaacaca gcaagaagga
     1621 agagagtctc agaaaatgaa acgcttgatg cgcctgcgcg cgactcaaca cttacgcgac
     1681 ttgtgcgcgg aaacgaattt caatcgcgcg caattgattc agccgttttt cgtcgttgaa
     1741 ggcctgaaag ccgatgaacc aatcgccggt ctgcgcggca atgttcgcct cagcgtctcc
     1801 tccgcgttgc gacagattga aagcgatttg aatgatggcg taactcattt cctgctcttc
     1861 cccgttcccg gtaacaagcg tgaaaaagat ttcgaccatc agttcgaacg cgatgtgatc
     1921 tcgcagatcc gaaaccagtt cggctcgaat ctttgtttgt gggtcgacac ctgcttgtgc
     1981 gcatacacga cgcacggcca ttgcgctgtg ctgaacgaca agggtattga tcatccgacg
     2041 acgcttgatg agctggcgaa ttcggcgctg gcgttcaccg aagccggtgc ggacggcatc
     2101 agccccagcg acatgatgga tggccgggtg ggccgcattc gcgcgcaact ggacgagaat
     2161 ggattcgatt tggtgccggt gatgagttac agcacaaagt tcgccagcaa tttctacggt
     2221 ccctttcgcg ccgcggccga ctccgcgcca cagttcgggg accgaaaggg ttatcagctt
     2281 gacgtgcgca atcgcaccga cgccctcgcg tcgagtcgtc gctgtgctga agagggcgcc
     2341 gaccttttga tggtgaaacc gggaatgact tcgcttgatc tgattgcgcc cattaacgaa
     2401 gagaccggac tgcaggttgg cgcatatcag gtcagcggcg agtacgccgg aatttcgcta
     2461 ctggctgata atgggctaat tgatttcgag cgcggactgt tggaaacgtg gcacgttttc
     2521 aaacgcgccg gcgcgcaatt catcatcacg tacggcgctc ggtatgcgaa caaattagga
     2581 atctgatttg gagtgcggtg gcagagcgac gcggcgacac cgctttggat cgtcaccacg
     2641 aaaccacgtt gagcaattca caaacatcca aagcgccgtc gccgcttcgc tctgccggcg
     2701 cactccatag cgatctcttc gaacgttcgc tgcaactttc accgggcggc gtgcacagtc
     2761 ctgtgcgcgc tttcaaaagc gttggcggaa caccgatctt ttttcgcagc gcgcaaggcg
     2821 cgattctgac gtccgttgaa ggtgacgact acattgattt ctgccagagc ttcgggccgt
     2881 tgatgctcgg tcatcgcgat ccggaagtcg ccgaagttgt gagggaagca atcgaaaccg
     2941 cctggagctt cggcgcgtgc gaaccttact cgctcgagct ggccgaatgg attacttctc
     3001 gtgtgccctg ggttgagatg ctgcgcttcg tttcttcggg cacggaggcg gtgatgagtg
     3061 ccctccgcgt ggcgcgggcg gcgaccgggc gcgcgcgaat tctgaaattc gaaggctgct
     3121 atcacggaca cgccgattcc cttttggtga aagccggcag cggattggcc ggcgttgccg
     3181 ccagttccag cgccggcgtt tccgaaagtg ttgcgagcga aacgctggtc gcgtcgctgg
     3241 atgatgaaga gagtgtgcgc gccgtgttcg acgggcacgg atcggaaatc gccgcagtga
     3301 ttctcgaacc ccaaccggcg aactacggac tgttgattca gcggcgcgag ttcatcgaag
     3361 agacggttaa cctggcgcgc cggcacggtg cgctcgttat cttcgacgaa gtcatttccg
     3421 gttttcgcgt ggcgatgggc ggcatggcgg aagttctggg gatgcgaccc gacctcgtga
     3481 cgtacggcaa ggttattggg ggcggatttc ccgtcggagc gtacggcggc cggcgcgatt
     3541 tgatggaaat ggtcgcacct tccggaccgg tttatcaggc cggaacgttg agcgcgaacc
     3601 ctgtcggcat gcgcgcggga ttggcgacgt tgcaaaagat tgaacgtgtc ggcgcctttg
     3661 aaacgctgga gaagcgaact gcgcagttct gcgatcgact gaatgcgacc ttcgatgatc
     3721 gagacttgcc cgtacaaatc acgcgcacgg cttcactatt ctggctgcat gcgaagactg
     3781 cca
//
LOCUS       DATDBY010000273         2472 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2054578, whole genome shotgun sequence.
ACCESSION   DATDBY010000273 DATDBY010000000
VERSION     DATDBY010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2054578"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..778
                     /locus_tag="VIT19_05075"
     CDS             <1..778
                     /locus_tag="VIT19_05075"
                     /inference="COORDINATES: protein motif:HMM:NF015686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEY5838388.1"
                     /translation="KGEKDSMEWLSDPSSWVAFLTLVALEIVLGIDNIIFISILAGKL
                     PAEDQKRARLIGLSLALVIRVLLLFSLSWVIGLTAPLFTVFHQAISGRDLILLVGGLF
                     LLGKATFEIHESLEAPHGHATAKVSATFLSVVIQILIIDAVFSLDSVITAVGMVDHVG
                     IMIGAVVVSIAFMMWFASPVSRFVSKHPTIKMLALSFLLLIGLNLIVEAFDVHVPKGY
                     IYFAMGFSVFVEMLNIRIHRKRDPVHLHERYAPDTPEKTK"
     gene            847..1203
                     /locus_tag="VIT19_05080"
     CDS             847..1203
                     /locus_tag="VIT19_05080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838389.1"
                     /translation="MINGAHVIIYSKDAEADRSFFKDVLGFHSVDAGGGWLIFALPPA
                     EVACHPGEENDQHELYLMCDDLKATMSALNAKGIQCSEVQEPPWGLLTKITLPGGGNL
                     GLYQPRHPTAANLDSK"
     gene            1312..2193
                     /locus_tag="VIT19_05085"
     CDS             1312..2193
                     /locus_tag="VIT19_05085"
                     /inference="COORDINATES: protein motif:HMM:NF042890.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6748 domain-containing protein"
                     /protein_id="HEY5838390.1"
                     /translation="MWPLTSGSSHPPDPEPLSENSHGTDSLGPEPLAASGDYFLVRQD
                     RRRCISPLCGGYFVKRVNQSRTRCANGRWMSECYVAEIDWKGQPEIDPGKALVRGDVV
                     ARRFPRFGNLGALRVTESWQSPSDKPATGTLYRVRDRGVRCITHPCLTHSANKLGFAF
                     TKNIAGVDLAAGGAGGELISEGAAAMTEPDGVIVAGYFAPVTGPGGRAQTLKATKFYL
                     PAGTQIGGQPPGAGRCFKTGCSSQVCADRNVITTCEFRPEYACYQKAMCERQRNGECG
                     FTQTAELAACLARARRN"
BASE COUNT          513 a          658 c          716 g          585 t
ORIGIN      
        1 gaaaggggaa aaagattcta tggagtggct ctccgaccct tcatcgtggg tcgccttctt
       61 aacgcttgtc gcgctggaaa tagttctcgg catcgataac atcattttta tttcgattct
      121 cgcgggtaag ctgcccgccg aagatcaaaa gcgcgcacgg ctcatcgggc tcagcctggc
      181 cctggtcatc cgcgttttgt tgttgttttc gctttcgtgg gtaatcggct tgacggcgcc
      241 gctcttcacc gtctttcacc aggcaatctc aggtcgcgac ctgatcctgt tggtgggagg
      301 cttgttcctg cttggcaaag caaccttcga gattcatgaa agcctcgagg cgcctcatgg
      361 acacgcaacg gccaaggtca gcgccacttt tctcagcgtg gtcattcaaa tcctgattat
      421 tgacgcagtg ttttcgttgg actcagttat cactgcggtc gggatggttg accatgtcgg
      481 gataatgatc ggtgcggtgg tggtgtcgat cgccttcatg atgtggttcg cctcgccggt
      541 cagccgcttc gtgtctaaac atccgacgat caaaatgctg gcgttgagtt ttctccttct
      601 catcggcttg aacctgatcg tcgaagcctt cgacgttcac gttccgaagg gttacatcta
      661 ctttgcaatg ggcttctctg tattcgtcga gatgctcaac atccgtatac acaggaagcg
      721 tgacccggtt catttgcacg agcgttacgc ccccgataca ccggaaaaga caaagtaacg
      781 gttaaccaat ttcatgaggg cggcgtagca gtaaaccatt ttccaagcga caaaggatcc
      841 aaggttatga tcaatggcgc acacgtcatc atctatagta aggatgccga agccgatcgc
      901 tcgtttttca aagacgtact cggttttcat tcggttgacg cgggtggtgg ctggttgatt
      961 ttcgctttgc cgccggcgga agtcgcgtgc catccgggtg aggagaacga tcagcacgag
     1021 ctctatttga tgtgtgatga cctgaaggcc acgatgtcgg cgttgaacgc caagggcatt
     1081 cagtgctccg aagtgcagga gccgccgtgg gggctgctca cgaaaataac tctgccgggc
     1141 ggaggcaacc tcgggcttta tcagcccagg catcccacgg cggcgaatct tgattcgaaa
     1201 taacgtcggc ggctcacagc gtctggaggc tttaccgaaa tgaatacgac gagtcacgtt
     1261 cagcgagtta gtttcgttgc cttatttgcc attctgagtt tcgcggtcgg aatgtggcct
     1321 ctaacatccg gctcttcaca tccgcccgat ccggagccgc tctcagaaaa cagtcacgga
     1381 acagattccc tggggcctga gccgctagcg gccagtggag actatttcct cgtccggcaa
     1441 gataggcgtc gctgtatctc tccgttgtgc ggcgggtatt tcgtcaagcg cgttaatcaa
     1501 tcgcgaacgc gctgcgcgaa cggtcgctgg atgagcgaat gctacgttgc tgaaatcgat
     1561 tggaagggac agccggaaat cgatcccggc aaggcgctgg tgcgcggcga tgtggtcgcc
     1621 cgtcgtttcc caaggttcgg caatcttggg gcattgcgtg tgactgaatc gtggcagagc
     1681 ccgagtgaca aacctgcaac gggcacgctc taccgcgtac gcgatcgcgg cgtgcgctgc
     1741 atcacgcatc cgtgtcttac ccattcggca aacaaactag gcttcgcttt cacgaagaac
     1801 atcgcgggcg tcgatctggc ggcggggggc gcaggcggtg aactaatttc ggaaggtgcg
     1861 gcggccatga ctgagccgga cggtgtaata gtcgccgggt acttcgcgcc ggttacgggc
     1921 cctggagggc gagcacaaac cctgaaggcc acgaagtttt atttgcccgc cggcactcaa
     1981 atcggcggcc agcctccagg tgcgggccgc tgtttcaaga ctggctgttc aagtcaggtc
     2041 tgcgcggacc gtaacgtcat caccacttgt gagtttcgtc ccgagtacgc ctgttatcaa
     2101 aaggcgatgt gtgagcgtca acggaacggt gaatgcggct tcacgcagac tgctgagttg
     2161 gcggcttgcc tggcgcgggc ccgacgaaac tgacgtgaga cgaagagtta gagacaaagc
     2221 caaagggcca gtttccgaat tcggatctca ctctgtgtct ctgtgaaggc tctctgtgtc
     2281 tcggtggtga gccattgtcg agatgtttca accacagagg cacagagctc acacagagac
     2341 actgagagat tcctttgaaa cttcacgtct atccgcgtta ctctgctgtc gatgacttca
     2401 aattggcgcg acaatcttat cgacgactca gacggaatgc gcgagctgct cttggaaagt
     2461 aagagcatcg ct
//
LOCUS       DATDBY010000274         5043 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1600107, whole genome shotgun sequence.
ACCESSION   DATDBY010000274 DATDBY010000000
VERSION     DATDBY010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5043
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1600107"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..771
                     /locus_tag="VIT19_05090"
     CDS             <1..771
                     /locus_tag="VIT19_05090"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY5838391.1"
                     /translation="GLATRRLERIARSDWLLLVVSSLLGVVLNQWLFVKGLSLTTAVN
                     ATLLGTTIPVFTLLVSIVVGNDHASVRRIIGILLAGAGVVYLIGLDRASFSQSSVVGD
                     LLIVLNSLCYGTYIAISKRLLSRYNALTVITWVFIVGCVPTVPVAAFSLSGVSFGDVP
                     GTVWLAVAYIVLFATVVCYYLNSWALARVPPSTVAVYIYLQPLLAFVLAPIVLGERLS
                     SRVIIASLLVFAGVAVVTSRGRTKAIEEVSEHPEAFGH"
     gene            complement(957..1763)
                     /locus_tag="VIT19_05095"
     CDS             complement(957..1763)
                     /locus_tag="VIT19_05095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838392.1"
                     /translation="MNTVIGIFNSFADAKRAAAMLRSLGIPDESIGVLSPRTPETEIE
                     ANIPTSETEQPGMGTAVGGAVGGALGVAGGMHAGMVAATALIPGVGPIFALGLIGAAL
                     FGIGGAAAGAAAGNAVEGNLDTGLPRDELFLYEDALRKGRSVVIALADSDQLAETARA
                     ELGRAGAESVDAARDQWWTGLRDAEQEHYSSQGGNFNVDEAAYRLGFEASLHPDRRGR
                     NYESTLENLRTRYEDNCGLEAFRRGYERGQAYQSSVETQQTEPTASRKAA"
     gene            complement(2094..2327)
                     /gene="rpoZ"
                     /locus_tag="VIT19_05100"
     CDS             complement(2094..2327)
                     /gene="rpoZ"
                     /locus_tag="VIT19_05100"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEY5838393.1"
                     /translation="MANINEEFEEASETVPEIDAKYRLIILAAKRSKQLQRGARPRID
                     IDATKHKPTRIALEEVIRGKVPFHFKPLEGKQN"
     gene            complement(2382..3062)
                     /gene="gmk"
                     /locus_tag="VIT19_05105"
     CDS             complement(2382..3062)
                     /gene="gmk"
                     /locus_tag="VIT19_05105"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR03263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEY5838394.1"
                     /translation="MSSELINKPDTDSARGGRGMLIVVSSPSGGGKGTLIDRVLQTVP
                     GVSYSVSYTTRPPRAKEQDGREYFFVSTAAFEEMIQRGEFLEWANVYGHLYGTSHKQV
                     ERERAAGRDIILEIDVQGADSVRGLIEDAVTVFILPPSFELLQNRLVKRGTDSVEDLA
                     RRLRGAPAEVEQYRKFQYVILNDDINRASAQLASVIYAERARRERQETTSSEALADFA
                     RAGTVAQT"
     gene            complement(3052..3933)
                     /locus_tag="VIT19_05110"
     CDS             complement(3052..3933)
                     /locus_tag="VIT19_05110"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HEY5838395.1"
                     /translation="MKSMTGFGRGAASGDGFTVAVEIKTVNNRYLDIHLRAPQELNAI
                     EMDIRKRVKARLSRGRVDLNISFDRAGSEATYEINQSVVSAYVDALREIQRQFNLGGA
                     IDVTSIARLPGALSSPRDEFNGGVASAIEAAIDQALDSLEQMRGAEGAALAEEMRSRL
                     GKIDAAIPTIEAAADGLGESYRQRLHKRIAELLAREGQSIEVDSARLAQEVAYLADRS
                     DITEELARLKSHVDQFREAIDSHDEVGKRLDFLLQEFNREANTVLSKSTEIPIKEAAL
                     AIKAEVEKLREQVQNVE"
     gene            complement(4117..>5043)
                     /locus_tag="VIT19_05115"
     CDS             complement(4117..>5043)
                     /locus_tag="VIT19_05115"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY5838396.1"
                     /translation="FLFFLFRSYDPMRKLSRLQNSLSQALAAARHVWEVLDERSEIPE
                     KPNAVELSPLRSEIELRQVSFDYANEGRKVLQDVNLTVPKGKMVALVGESGGGKSTLT
                     KLMPRFHDPTSGAVLWDGTDLRDARIASLRRQMALVTQETVLFNDTVRYNITYGLPEA
                     SDEELRDAARTAFAHDFIMDLPSGYDTIIGERGTFLSGGQRQRLAIARAILMNAPVLI
                     LDEATSALDAESEQLVQRAIANLVRDRTTIVIAHRLSTVRRADNIVVMEAGRIIEQGT
                     HKDLLARGGQYQKLYEMQFADEEEELSVVSGQ"
BASE COUNT          982 a         1474 c         1408 g         1179 t
ORIGIN      
        1 ggacttgcga cgcgcagact tgagcggatt gcgagatcag attggttgct gctcgtggtc
       61 tcgagcttgc tgggcgtcgt attgaatcag tggctgtttg tgaagggcct gtcgctaact
      121 accgccgtta acgcaacgct gctcgggact acgattccgg tgtttacgct tttggtgagc
      181 atcgttgtcg ggaatgacca tgcatccgtg cggcgcatca tcggaatcct cctcgccggc
      241 gccggagtcg tttatctgat tggccttgac cgcgcgtcct tttcgcagag ctctgtcgtc
      301 ggggacttgc tgatcgttct caattcgctc tgctatggaa cgtatatcgc gatttcaaaa
      361 cgcctgttga gccgctataa cgcgctgacc gtgattacct gggtcttcat tgtcggatgt
      421 gttcccaccg ttcccgtcgc ggcgttcagc ctctcgggag tgtcctttgg cgacgttccc
      481 ggtacggtct ggctggcagt cgcctacatc gttctgtttg cgacggtcgt gtgttactac
      541 ctgaattcgt gggccctggc gcgcgtgccg ccgagcacgg ttgcggtcta catttacttg
      601 cagccgctac tcgcatttgt gctggcgccg atcgtgctgg gagaaagact gagctcccgg
      661 gtgatcatcg cgtcgctgtt agtatttgcg ggcgtggcag tcgtgacgag tcgcggtcgg
      721 accaaagcaa tcgaggaagt atcggaacat cctgaggcgt tcggacacta ggcaaacggt
      781 gagtcgcacg cgcggcattt cgagcgacga cgcgcgttga gcgtgtggca agacgcgcaa
      841 cgcacgtaca tcgcgcgcgc gaacaggtgc ataacgacat agctgccgcc gaggatggcg
      901 acagctattg cgatgttcag aagagtctct ttcaggctag tcctcgacgg cggccgtcaa
      961 gcagccttac gactcgccgt tggttccgtc tgttgggttt caaccgagct ctggtacgcc
     1021 tggccccgtt cgtaaccgcg gcgaaatgct tcaagcccgc agttgtcctc gtagcgcgtt
     1081 cgcagattct cgagtgtgct ctcgtagttt cggccgcgtc gatcggggtg aagcgatgct
     1141 tcaaagccaa gccgatacgc cgcttcgtcg acattaaagt tgccgccctg gctcgaataa
     1201 tgctcttgtt cagcatcccg caaaccggtc caccattgat cgcgcgccgc gtcgactgat
     1261 tcggcgcccg cacggcccag ttccgcccgc gccgtttccg ccagttgatc agaatcggcg
     1321 agcgcaatca caactgagcg tcccttgcgt aaagcatctt catacaagaa aagttcatcc
     1381 cttggcaagc cagtgtcgag gttgccttcg actgcgttac cggcggctgc gcctgctgct
     1441 gcgcctccga tgccgaatag ggcggcgccg atcaacccga gcgcgaatat cggcccgacg
     1501 ccgggtatta gagcggttgc agcgaccatt ccggcgtgca tgccgccggc cacacccagc
     1561 gcccctccga cagctccgcc cacggcggtt cccattccag gctgttcggt ttccgacgtg
     1621 ggaatgttcg cttcgatttc agtttcagga gtgcgcggcg aaagcactcc gatgctttca
     1681 tcaggtatgc caagtgaccg aagcatagct gctgcgcgct ttgcatcagc aaatgaattg
     1741 aagattccga taacagtgtt cattagtcct acctccaatc agtttgtcat gcgcgaaacg
     1801 tgccacatca gagacttcag ccaattcgtc acgttttcac ggcgaaagag aagaagattg
     1861 taagtagata tttggagttt tattgaggaa ctgcgcgaat accgtttcct cttacgctcg
     1921 gcagggtggt ttagccccgc tgagttaaag acagcgcaag cgggggcaag ccgccttcct
     1981 aacctgagag atttttcaag cagccaccgc cgcttggctg tgcggattat taactcagga
     2041 acggcttagt gcgagatacg gagggatcag agcgcgactc gaacttatga agttcagttc
     2101 tgtttgcctt ccagcggctt aaagtggaat ggaactttac cgcggatcac ttcttccagg
     2161 gcgatgcgcg tcggcttgtg tttcgtggca tcgatgtcga tacgcgggcg cgcgcctctc
     2221 tgaagttgct tgctgcgctt tgcggccaaa attatcaacc ggtacttcgc atcaatttcc
     2281 ggcactgttt ccgatgcctc ttcaaactct tcgttaatat ttgccatcgt cataatcgtc
     2341 tttactcctc aagctgtcga tagttggttt tcagtagttg actaggtctg ggcgactgtt
     2401 ccggcccgcg cgaagtcagc aagcgcttcg ctcgaagtcg tttcctgtcg ctcacggcgc
     2461 gcgcgctctg cgtaaatcac tgacgccagc tgcgccgagg cccggttgat gtcgtcgttc
     2521 agtatcacgt attgaaactt ccggtattgc tcgacctcag ccggcgcgcc gcgcaatcgt
     2581 cgcgcgagat cctccactga gtctgtgccg cgcttcacca gccgattctg caacagttca
     2641 aatgacggcg gcaggataaa aacggtgacc gcatcttcga tcagcccacg cacgctgtcc
     2701 gcgccctgca cgtcgatctc caggatgatg tcacggcccg ccgcccgctc gcgctctacc
     2761 tgcttgtggc tggtaccgta gaggtggcca tacacattcg cccattcaag aaactcgccg
     2821 cgctgaatca tctcttcaaa cgcggcggtc gaaacgaaga aatattcgcg gccgtcctgc
     2881 tctttcgcgc gtggaggacg cgttgtgtac gagaccgagt aactgacgcc gggcactgtt
     2941 tgcaggacgc gatcgatcaa ggtgcctttg ccgccgcccg acggggaact gacgactatc
     3001 agcatgccgc gaccgcccct ggcgctgtca gtatccggct tgtttatcag ctcactcgac
     3061 attttgcact tgttcgcgga gtttctcaac ttcagcctta attgccaggg ccgcttcctt
     3121 gatcggaatc tcggtggatt tcgagaggac agtgttcgct tcgcgattga attcctgaag
     3181 caggaaatcc aggcgtttgc ctacttcgtc gtgcgaatcg atggcttcac ggaattgatc
     3241 cacgtggctt ttgagccgcg ccagctcttc cgtgatgtcg ctgcgatcgg ccaaataggc
     3301 gacttcctga gccaacctgg ccgaatcgac ttcgattgat tgaccttcgc gagcgagcaa
     3361 ttccgcgatt cgtttatgca gtcgttggcg gtaactttcg cccagaccgt cagcggcggc
     3421 ttcgattgtc gggatggcgg catcgatttt tccgagccgc gaccgcattt cttcagccag
     3481 cgccgcgccc tctgcgccgc gcatctgttc caggctgtcg agcgcctgat cgatggcagc
     3541 ctcaattgcg ctggcaaccc ccccgttgaa ctcgtcgcgt ggagaagaca gcgcgcccgg
     3601 caggcgggcg atggaagtca cgtcgatagc gccgccaagg ttgaactgcc gctgaatctc
     3661 gcgcagcgcg tcaacgtagg ccgagacaac cgattgatta atttcgtacg tcgcctcgga
     3721 gccggcccga tcgaaactga tgttgagatc gacacgcccg cgggacaagc gggctttcac
     3781 tcgcttccgg atgtccatct cgatcgcgtt caactcctgc ggagcgcgca agtgaatatc
     3841 gaggtaacga ttgttgacgg tcttgatttc gacggccacg gtgaaaccat cgccgcttgc
     3901 cgcgccacgt ccgaatccgg tcattgattt cataggcttg tcagtcgtcc gtcgtcagtt
     3961 gtcagtagtt ggttttgctc tttgtacttt gtacttcgtg ctttgacgtc tcgccataat
     4021 tgacaacttc agcaaagagc gactccgcaa aaccgacatc gaagtactaa gcacaaagta
     4081 caaagcacaa agtacaaagc acgcattgaa cacggactac tgaccactga ccactgacag
     4141 ttcttcttcc tcatcagcga actgcatctc gtacaacttt tgatactgcc cgccgcgggc
     4201 aagcaagtcc ttgtgcgtgc cttgctcaat gatgcgcccg gcttccatga cgacgatgtt
     4261 atcagcgcgc cgcacagtgg aaagcctatg cgcgattaca atcgtcgtgc ggtctcgcac
     4321 caggtttgca atcgctcgct gcaccagttg ttcggactca gcatccagcg ccgaggtcgc
     4381 ctcatcgagt attaaaaccg gcgcattcat caggatagcg cgggcaatcg ccaggcgctg
     4441 gcgctggccg ccggaaagga aagtgccgcg ctcgccgatg attgtgtcat agccgctcgg
     4501 caaatccatt atgaaatcgt gcgcgaaggc agttcgcgca gcgtcgcgta attcttcgtc
     4561 ggaagcctca ggtagtccgt atgtgatgtt gtaccggacg gtatcgttga aaaggaccgt
     4621 ttcctgagtc accaaagcca tctgacgccg caaactggcg attcgcgcat cgcgcaaatc
     4681 ggtcccgtcc cacagaaccg ctccggaggt gggatcgtga aaacgcggca tgagtttcgt
     4741 tagggttgat ttgcccccgc cggattcgcc aaccagagcc accatctttc ccttgggcac
     4801 cgtgaggttc acatcctgaa gcaccttacg tccttcatta gcgtagtcaa atgaaacctg
     4861 gcgaagttcg atctcgcttc gcagcggact gagctcgact gcattaggct tctcgggaat
     4921 ctccgagcgc tcgtccagta cttcccaaac atgtcgcgcg gccgcaagtg cctgtgacag
     4981 cgaattctgc aaacgcgaaa gcttgcgcat cggatcgtag ctgcggaaga ggaagaatag
     5041 aaa
//
LOCUS       DATDBY010000275         6122 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1273377, whole genome shotgun sequence.
ACCESSION   DATDBY010000275 DATDBY010000000
VERSION     DATDBY010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6122
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1273377"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="VIT19_05120"
     CDS             <1..772
                     /locus_tag="VIT19_05120"
                     /inference="COORDINATES: protein motif:HMM:NF016354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF512 domain-containing protein"
                     /protein_id="HEY5838397.1"
                     /translation="GEVLRRTVNDLAALHPKVTSVAIVPLGLTRYLNDPRLTPVTPEF
                     CRDTIREVTEMQRDFRARLGTTFAFLGDEIYLKAGRAIPSRKHYGEYPQIEDGIGMVR
                     SFHNQFDSLMRRLERAGSSAAQPRDPQPGSPAGVGRSAKPLSGTIMTGTLFAPVLTKL
                     VGRINQRLGTNVSVLGVPNEYFGGDVSVAGLLTGGDFVAARGQVSGDFVIIPKVVLKS
                     DEPVMLDGMRFDELCEKFDVPVYAYDFQGLASMIANPN"
     gene            821..1825
                     /locus_tag="VIT19_05125"
     CDS             821..1825
                     /locus_tag="VIT19_05125"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5838398.1"
                     /translation="MTVKSFRLAGVCFVILTASICGRAQRDNPSLFGEVKINVKGTAQ
                     RATPPQATVILFVPSGKELALPTGPEFARQTLTNGGRYRFSDLPPGEYELAVEIDHYE
                     VSRTRIVLSSLHAPYGLQHDIAFDWQPLGDATNSPTISAADLHKRTAANKRLFKKAED
                     AVVEKDYGQAISLLTQMLASDKADYQAQSILGTLLGSQGKYDEAEQAFLSALAVKPTF
                     APALLDFGRLRLKQKRFADAVEPLTKLVGLQPDSGEANLLLGDAYAQTDQRAKAVPHL
                     NSAASLGYPQAHLRLAWIYDAAGSKEKAALEYEVFLKKKPDYPDRQKLEGYIKANKKN
                     "
     gene            1835..2419
                     /locus_tag="VIT19_05130"
     CDS             1835..2419
                     /locus_tag="VIT19_05130"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5838399.1"
                     /translation="MTNADDKVDLARKILDVGCGWNKVPGAIGIDSNPRAHADVVHDL
                     GVVPYPFPDNEFDEIVCRHVIEHVPDVMALVSELHRIAKPGARLTIVTPHYTNPDWAT
                     DPTHRNHFNSYSFNCFIGDRQLFPFYTDVRLKAIRTYVSLANLWRAIGLEFLVNLDQR
                     RPSFRFTRKFWEFYLSMVFRGKELQMEFEVVKGR"
     gene            2587..4788
                     /locus_tag="VIT19_05135"
     CDS             2587..4788
                     /locus_tag="VIT19_05135"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5838400.1"
                     /translation="MKKALALILIGVTSCGAVAAQTPQEPNKRSADDVLRITTELVQV
                     DAVVTDKNDQVISDLKLGEFSLYENGKRQELQFVEYVGADSKPRVERNTAAAGRGDSD
                     VVRNLSEADLHRVFAFVVDDLTIPAEDMSTVRSLLTNFVDKRMDEGDLVAIVRVMGGV
                     GLLQQFTSDKQLLHRAIAKLTPRRHPYSAFNNLEGVDRLDPKLALSGGGGGEVATRTD
                     PTSGMDMTLPGGDLDSDLSPDGYTRGSRALITLTLAGSVIDSMKSLPGRKNMVLFSGG
                     LPIFDTTQSQISLDGAPVSIQETRSLGTSVTYLIQLLADRAGRAGVAVNTMDVRGLKA
                     SRGVSSFTDPGNEAKSGLARFDSAGATFGRAPDPAIFDNIGLDTLTGHQGLEALSDAT
                     GGVSIINTNNFNEGLDRVISRSRYYILAYRPTEPFDGKFHKLQIKVDRPGAKVYTRVG
                     YVAKADEPAKSLTKEQSLIKAAMAPLAKRDVNVSGAIQHRFVPDNRAIIDVNLRIDGS
                     KLEFKQAIDGKYQTTLDVVGFVVNRLGRTEGGFSQTLNASLTPEEYKRALTNGIGYTG
                     QVQLDPGGYQLRVAVRETETGRLGTLSRYLEVPDMSKKRFTASSIFLHAVDTAAGSKA
                     QPVALTSLRQISRKDDLRYSVVVYNAKTDKDKPKLGARLTISRADKIIFQGPVQAVEL
                     RGTDASQAVRLGQIGLSKLSRGHYFLTLEVTDALADKSPALVRTIDFSIID"
     gene            5167..>6122
                     /locus_tag="VIT19_05140"
     CDS             5167..>6122
                     /locus_tag="VIT19_05140"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEY5838401.1"
                     /translation="MINFPKVRAVSLVATLVLVFTALFALSASNAMAQATTGTLRGVV
                     TDVNGAVVPGASVTAKNETTGGASPTTTTNDDGVYDISALPPGTYTVTVEATNFKRSA
                     NTGVQVKVGIVNSFDAKLEAGSVSETVTVISSTEEIVQRDQSQISTTVETRKIEDLPS
                     NAAGAGLDTLALLAPGVFPTNSGGVNTNGTGLNVNGNRARSNNFQIDGSDNNDLSVAG
                     PAMFVDNQDQIQELQIITNNFSAQYGRNQGAIINYVTKGGTNEYHGRLFEYHRNNKAL
                     NSLDNIERASGQTEPNQSLFNTFGFVVGGPLHLPRFGEGGPS"
BASE COUNT         1420 a         1660 c         1704 g         1338 t
ORIGIN      
        1 cggcgaggtc ctgcgacgca ccgttaacga tctcgccgcg ctgcatccga aagtcaccag
       61 cgtcgcgatc gtgccgctgg gtttgacgag atacttgaac gatccgcgat tgacgccggt
      121 cacgcctgaa ttttgccgcg acacgattcg cgaagtgaca gagatgcagc gtgacttccg
      181 cgcgcgactg ggaacaacgt tcgcctttct tggcgacgag atttatctca aggcgggccg
      241 cgcgattcct tcgcgcaagc attatggcga gtacccgcag atcgaagacg ggatcggcat
      301 ggtgcggagt ttccacaacc aattcgactc gctgatgcgc aggcttgagc gcgcgggcag
      361 ttcagcagcc caaccccggg atccacagcc gggcagcccg gctggggtgg ggcggtcagc
      421 gaagcccctt tcggggacga ttatgaccgg aacgctattc gctcccgttt tgacgaaact
      481 cgtcggccga atcaatcagc gtctcggaac taacgtcagt gttctcggtg ttccaaacga
      541 gtactttggc ggcgatgtga gcgttgcggg tttgctcacc ggaggtgatt tcgtcgctgc
      601 ccgtggtcag gtgtcaggcg actttgtcat tattccgaaa gtcgtgctga aaagcgacga
      661 accagtaatg ctggacggca tgcggttcga cgagttgtgc gagaaatttg atgtgcccgt
      721 gtacgcctat gatttccagg gccttgcctc gatgatcgcg aacccaaatt gatttaatca
      781 cagccaggcg ttggctcggc gctgctgtgc ggtgggaatt atgaccgtta aatcttttcg
      841 actcgccggt gtttgctttg tgattctaac ggccagtatc tgtggccggg cgcaaagaga
      901 caatccgagt ttattcggtg aagttaagat caacgtcaaa gggactgccc agcgcgccac
      961 ccctcctcag gcgaccgtga tcctcttcgt tccgtccggt aaagaactcg cgctcccgac
     1021 cggacccgag ttcgcaagac agactctcac taacggcggc cgttaccgct tttccgattt
     1081 gcctccaggt gagtatgaat tggctgtcga aatcgaccac tatgaagtat cgcgaacccg
     1141 catagtttta tcgtcccttc atgcgccata cggacttcag cacgacattg cgttcgattg
     1201 gcagccgcta ggtgatgcta cgaatagtcc gacgatctcg gccgccgatc ttcataaacg
     1261 aaccgcggcc aacaagcgtc ttttcaagaa ggcagaagac gcggtcgtcg aaaaagatta
     1321 cggtcaggca atctctctgc tcacgcagat gttggccagc gacaaagctg actatcaggc
     1381 ccagagtatt ttgggaacgc tcctcggaag ccagggaaag tatgatgaag cagagcaggc
     1441 gtttcttagc gctctggccg taaagccaac cttcgcgccc gcgctgctcg actttggcag
     1501 gctgagacta aaacaaaaga gatttgctga cgcagttgaa cctctgacaa agctagtcgg
     1561 attgcaaccg gattcgggag aagcgaatct gctcctcggt gacgcttatg cgcaaacgga
     1621 ccagcgagcc aaggcagttc ctcacctgaa ttcggcggcc agcctgggtt atccgcaagc
     1681 tcatctgcgc ctcgcctgga tctatgacgc ggcgggatct aaagagaaag cggcgctcga
     1741 gtatgaggtg tttctcaaga agaaacctga ctaccctgac cggcagaagt tggaaggcta
     1801 catcaaagcc aataagaaga attaattcct ccgcatgacg aacgccgacg acaaagtaga
     1861 cctggcgcgc aagatccttg acgtcggatg cggctggaac aaagtcccgg gcgcaatcgg
     1921 catcgattcc aatccacgag cgcacgccga tgttgtgcac gacctcggcg tggtgccgta
     1981 tccatttccg gacaacgaat ttgacgagat tgtttgccgc cacgtgattg agcacgtgcc
     2041 ggatgtgatg gcgctggtca gtgagttgca tcgcatcgca aaacccggcg cgcgcctcac
     2101 gatcgtcacg ccgcattaca cgaatcccga ctgggccacc gacccgacac accgcaatca
     2161 cttcaacagc tattcgttca actgtttcat cggcgatcgc caactttttc cgttctacac
     2221 ggacgttcgc cttaaagcga ttcgcaccta cgtgtcactg gccaacctct ggcgcgcgat
     2281 cgggttggag ttcctggtaa acctcgacca gcgccggccg tcattccgct tcaccagaaa
     2341 attttgggag ttctatctaa gcatggtttt tcgcgggaaa gagcttcaaa tggagttcga
     2401 ggtcgtgaaa ggaagatgat gaacctcatc ggcgtttgag ctccacagcc aaacgaaacg
     2461 gcgccgacga ttcgaaattt ggcctccgcc aatctataat ccgcagcctg ggaatttccg
     2521 gccgatggtg aggtaccctc gttactcccc cgaaattgaa ttcttattaa ggcaaggaat
     2581 tgaattatga agaaggcgtt agctctaatt ttgataggcg ttacaagttg tggcgcggtc
     2641 gcagcccaga caccgcaaga accaaacaaa cgtagtgccg atgatgttct tcgcattacg
     2701 actgaactgg ttcaggtcga tgccgtggtc acggacaaga atgaccaggt gatttccgat
     2761 ctcaaactgg gcgagtttag tttgtatgag aacggcaagc gccaggaatt acagttcgtc
     2821 gaatacgtcg gcgcggactc gaaaccgcgt gtggagcgca acaccgcggc cgccgggcgc
     2881 ggcgactcgg acgtcgtgcg aaatttatcg gaggccgacc tgcatcgtgt atttgccttc
     2941 gtcgttgatg atttgaccat tcccgccgag gacatgtcta ccgtgcggtc ccttctgact
     3001 aattttgtcg acaagcgaat ggacgaaggt gatctggtcg cgattgtgcg ggtgatgggc
     3061 ggcgtgggac tgctgcaaca gttcacctca gacaagcaat tgctgcatcg tgcgatcgcc
     3121 aaactaacgc ctcgcaggca tccgtactct gcttttaaca atctcgaagg cgtcgatcgg
     3181 ctggatccga agctggcgct gagcggcggc ggcggtggtg aagtggcaac acgaaccgac
     3241 ccaacctctg gaatggatat gacgctgcct gggggcgatt tggattcgga cttgtcgcct
     3301 gatggttaca cgcgcggctc acgcgcctta attacgttga cgctggccgg tagcgtgatc
     3361 gacagcatga agtcgctgcc cggccggaag aatatggtgc tgttttccgg ggggttgccg
     3421 atttttgaca caacacagtc tcagatttct cttgatgggg cgccggtatc gattcaagaa
     3481 acgcgttcgt taggtaccag cgtaacttat cttattcagc tgctggctga tcgagccggt
     3541 cgcgccggcg tcgctgtaaa tacgatggac gtgcgcgggc taaaagcttc gcgcggcgtc
     3601 tcttccttca ctgaccctgg caatgaagcg aagagtggtc tcgcgcgatt cgattcggca
     3661 ggtgcgacat ttggtcgcgc acctgacccg gctattttcg ataacatcgg gcttgatacg
     3721 ctcaccggcc atcagggcct cgaggcactc tctgatgcca ccggcggtgt atccatcatc
     3781 aacaccaaca attttaacga aggactcgat cgcgtaatct cgcgcagccg ctattacatt
     3841 ctggcttaca gaccgaccga gccgttcgat ggaaaattcc acaagctgca aatcaaagtc
     3901 gatcgtccgg gcgcgaaggt ctacacgcgc gtcggttatg tcgccaaagc tgatgaacca
     3961 gcaaagtctt taacaaaaga gcaatccctg atcaaagcgg ccatggcgcc gctggctaag
     4021 cgcgacgtca acgtctctgg cgcaatccaa caccgatttg ttcctgacaa tcgcgcgata
     4081 atcgacgtca atttgagaat cgatgggagt aagctcgagt tcaaacaggc aatcgatggc
     4141 aaataccaaa caacgcttga tgtggttggc tttgtcgtca atcgtcttgg cagaactgaa
     4201 ggaggcttca gtcagaccct caacgccagc ctgacgccag aggaatacaa acgtgcactg
     4261 actaatggca ttggatacac cgggcaggtt caacttgacc ccggcggtta tcaattgcgt
     4321 gtggctgtgc gcgaaacaga gacaggcaga cttggaacgt tgtcgcgtta tctcgaagtg
     4381 cctgacatga gcaagaagcg cttcaccgca agcagcatat ttctgcatgc ggtcgatacc
     4441 gccgcgggct ccaaagcgca gccggttgcg ttgacatctc tgcgtcagat ttctcgcaaa
     4501 gatgatttgc gttacagcgt cgtggtttat aacgcgaaga ctgataagga caagcctaaa
     4561 ctcggcgccc ggctgacaat tagccgtgcc gataagatta tttttcaggg acctgttcaa
     4621 gcggtcgaac tacgtggcac cgatgcgtcc caagcggtgc gactcgggca gattggtttg
     4681 tccaagcttt cccggggcca ttatttttta acgctcgaag ttaccgatgc cctggctgac
     4741 aagagcccgg ccttggtacg caccatcgac ttcagcatca tagattgacg ctcctaacaa
     4801 tctacgatcc gaaaaaatgt atccaaaaaa atgaattaag gcgcgggctt tttattccgt
     4861 aacgtttctg tcacaggccg aggggcgcga atccgcggga aagtcgcaag aatgacaggc
     4921 actgtcgaaa gcgctcgcgg ctgtcgcccc gtctcggtca tggtatgtgt cttgctcatt
     4981 tggagaagca tcccagacca cgctagttat gaaatttccg caacgcctca aagctccgtt
     5041 gaagaacacc gtttttagca gtcaacgttg gctatccggg cgttgccggt tatttgatta
     5101 gacgactcac agagatccgt cggcaaaagg atcttgccaa cagaaacatt aacccaggag
     5161 gtaaacatga ttaattttcc taaagttagg gccgtctcgc ttgttgcgac attagtgctg
     5221 gtttttacgg cgctttttgc gttgtcggcg agtaatgcga tggcccaggc gacaacgggc
     5281 acgctgcgtg gcgttgtcac cgacgtgaac ggcgcggtcg tgccgggagc ttcggtaacc
     5341 gcaaagaacg agacgaccgg gggagcaagc ccgacaacca cgactaatga tgacggcgtt
     5401 tacgacattt cggcgctccc gcccggcacc tacaccgtca cagtcgaagc taccaacttt
     5461 aagcgttcag cgaacacggg cgtgcaagtc aaggttggta ttgtcaattc gttcgatgcg
     5521 aaactcgaag cgggcagcgt ttcagagacg gtgacagtta tctcaagcac ggaagagatc
     5581 gtgcagcgcg atcagtcgca gatttcgacg actgttgaaa cccggaagat tgaagacttg
     5641 ccgtcgaacg cggccggcgc gggcctggac acgctggcat tgttagcgcc gggcgttttc
     5701 ccgacgaaca gcggcggcgt aaacaccaac ggcacgggtc tgaacgtcaa cggcaatcgc
     5761 gcgcggtcga ataattttca gatcgacgga tccgataaca acgacctgag cgttgccggt
     5821 ccggcgatgt tcgttgacaa ccaggatcag atccaggagc ttcagataat cacgaacaac
     5881 ttttccgctc agtacggacg taatcaaggt gcgattatca attacgtgac caagggcggc
     5941 acgaatgaat atcacggtcg gctctttgaa taccaccgca acaacaaggc actgaatagt
     6001 ctcgacaaca tcgaaagggc cagcggacag accgagccca atcaaagcct tttcaatacg
     6061 tttggtttcg tagtcggcgg cccccttcac cttccgcgtt ttggcgaggg cggcccaagc
     6121 ta
//
LOCUS       DATDBY010000276         3668 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_399200, whole genome shotgun sequence.
ACCESSION   DATDBY010000276 DATDBY010000000
VERSION     DATDBY010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3668
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_399200"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1067)
                     /locus_tag="VIT19_05145"
     CDS             complement(<1..1067)
                     /locus_tag="VIT19_05145"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838402.1"
                     /translation="MVLQSVSINLRRRLASGVLLTLFVLVVGCGHVLAGASHESTETA
                     GQYRVSFSDSLLSASLEARIPVKNGRLFMAAWGADHLPAGWATFIRHFEVRDDSDRQL
                     VFVSKPNGVWELSDGFNGTVRLKYQVDLSFAKEKWPYGNEQAALFEGGALFLVSKALF
                     VVSDAPGKRQVVFEAPGSWKISTPWFALNGNPRTFVAEDNNDLINNSLVLGKHFEYVF
                     NEGRFTFVLALLGRSGQSSGLIAATLQQVVRNYVGIFDKTPQSKYLMTVFYAEAVDAE
                     AYAKSAAFSERDPITKHNLIRWGNTLAHELFHAWNGHAIRGVDYATSQWFSEGFTEYF
                     ANLALVQERLISKDLFIRKIE"
     gene            complement(1281..2939)
                     /locus_tag="VIT19_05150"
     CDS             complement(1281..2939)
                     /locus_tag="VIT19_05150"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY5838403.1"
                     /translation="MKKDLCKNLDVTNATSSLVLILLLLLSGMVTSAVAQPLPGSVWT
                     GGFWLDEKWVAVNVRFSAQGQNSGGTADVISPYYGGSENAINVPLENMKQTGDSLHLE
                     VPVQTRKVIFDGHRKGNTISGNFVYGESKGMFGLTPWANVTLATLEKYYGAYRVAPNH
                     VISIFRGWNYARTLNYVDYKTGQVGTLWPASENEFFSGEGLAVSFPVTTRVVFEMASN
                     SKPTGLRWRTNNGFKLTARRIELKEERITFKNGDVSLGGTLILPATGQRHSVVIVTPG
                     DYGTARDQLRMWAHNFASRGIAAFVFDARGGGESTGSANSSSFSDLANDVLAAVQSLK
                     ARAEINPKQIGLFGFSNSSFIVSLAASRSRDVSFLIMQSFVGVPGWKQESFRAETQLR
                     VDRFPESTVKQGADFMRLKFAVARTGNGWNELQALMDKARGERWLAYTNPPNRLERLR
                     QRQSVMTYDPVPALESLKIPVFAFWGDKDTFLPVQESVANFRRAMVKAGNKRYFIKVY
                     PNASHSLLESESGSPSTGGAEQKFVAGLWKLKTDWVRRHTNPSK"
     gene            complement(2936..>3668)
                     /locus_tag="VIT19_05155"
     CDS             complement(2936..>3668)
                     /locus_tag="VIT19_05155"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY5838404.1"
                     /translation="FYDLKKFANYSPKKESVTIKSLLTMSSAFDGNDDDANSPGNEEK
                     MYPTGDWIKFALDLPMDPKRNTGEKWAYFTTGVVLLGDIINKSVPEGLEKYADRKLFR
                     PLGITKYEWQYTPQKVPSTAGGLQMSALDFAKYGQLYQQGGRWHGKQLLARDWVQKTL
                     TKQIALSPGGEDFYGYLFWNTTFKIGGKHYEAFFATGNGGSKIFVFKDQPLVVVITGT
                     AYGKWYMHAQVFSIMNRYVLPAVLR"
BASE COUNT          853 a         1021 c          909 g          885 t
ORIGIN      
        1 ttttcgattt tcctgatgaa caagtctttg ctgattagcc gctcctgcac gagcgcgaga
       61 ttcgcaaagt actcggtaaa cccttcggaa aaccactggc tggtggcgta gtctacgccg
      121 cggatagcgt gtccgttcca cgcatgaaat aactcgtgcg caagcgtatt gccccagcga
      181 atcaaattgt gttttgtaat cggatcgcgt tccgagaatg ccgcgctctt cgcgtacgcc
      241 tcagcgtcaa cggcctcagc atagaatacc gtcatcaaat atttactctg gggagttttg
      301 tcgaagatgc cgacgtaatt tctgactacc tgttgcaaag tcgccgcaat cagcccgctt
      361 gattgtccgc ttcgaccgag gagggcgaga acaaatgtaa accgtccttc gttgaagacg
      421 tattcgaagt gctttcctaa aaccagcgag ttgttgatca agtcattatt gtcttcagct
      481 acgaaggttc gcgggtttcc attcagggcg aaccatggcg tggaaatctt ccaggaacct
      541 ggggcctcaa atactacttg acgcttgccg ggagcgtccg acaccacgaa caaggctttg
      601 ctgacgagga ataaagcacc gccctcgaat agagccgctt gttcatttcc gtacggccac
      661 ttttctttcg caaatgacaa atcaacctgg tacttaagcc taaccgttcc gttgaagcca
      721 tctgacaatt cccaaacgcc atttggcttc gacacgaaaa ccaattgacg atcagaatca
      781 tcccgtacct caaaatggcg aatgaacgtg gcccatccgg cgggtaaatg atcggcgccc
      841 cacgcggcca taaagagtcg cccgttcttg acaggtatgc gtgcttccag ggatgccgac
      901 agcaaactat cagagaagct tacccgatac tgaccagctg tttccgtgct ttcatgactt
      961 gcgccggcca aaacatgacc gcagcccacg accagcacaa acaatgtcag aagcacgccg
     1021 ctggccagcc gtcgtcggag attaatcgat accgactgaa gtaccatggg aagtccagag
     1081 cagcaccgac caaacatcct tacgtcaatc attcaccgcc gtcagaatat gttgcggcac
     1141 gtagacattc tgcgcaaata aaggccgccg ggtcgttgga attgcccctt aaaatgcggt
     1201 cactaaatcg agatcgggaa tcccattacg accgctattt ccagcggcat catacgcgag
     1261 cactcgttag tgccaaacac tcatttagag gggttagtgt gtcggcgcac ccagtcggtt
     1321 ttcaacttcc acaaacctgc gacaaatttc tgctctgcgc ctccggtgct gggacttccc
     1381 gactcgctct cgagcaggct atgacttgcg tttggataga ctttaatgaa gtaccttttg
     1441 ttgccggcct ttaccatggc gcgtcggaag tttgcgacgc tttcctgaac cggcaggaaa
     1501 gtgtctttat cgccccaaaa cgcgaagacg ggtattttca gactttccaa agcaggcacc
     1561 ggatcgtacg tcatgacgga ttgacgctgt cttaggcgtt ccaaccggtt cgggggattc
     1621 gtgtacgcaa gccatcgttc accgcgcgct ttatccatta gggcttgaag ctcgttccat
     1681 ccgttgcccg ttcgcgccac cgcaaatttc agccgcatga aatccgcgcc ttgtttgacg
     1741 gtggactccg ggaatcgatc gactcgaagt tgcgtctccg cgcgaaagct ttcttgtttc
     1801 cacccgggca ccccgacaaa ggactgcatg atcaggaacg aaacgtctcg agagcgtgaa
     1861 gcggcaagcg aaactataaa ggagctgttg ctaaagccaa acaaaccgat ctgttttgga
     1921 ttgatttcag cgcgagcttt aagagattgg accgcggcca ggacgtcgtt cgctaaatcc
     1981 gaaaacgaac ttgagttagc agaaccggtc gattcgcctc ctccccgagc gtcaaaaaca
     2041 aaggcggcga tgccgcggct cgcgaagttg tgcgcccaca ttcgtaattg atctcgcgct
     2101 gtgccgtagt ctccgggcgt cacaatcaca accgaatggc gttgcccggt cgcaggcaga
     2161 atcagagtgc cgccgagact gacatcgccg ttcttgaatg tgattcgctc ctctttcaat
     2221 tcgattctgc gagccgtcag cttgaatccg ttgtttgttc gccacctcaa acctgtaggc
     2281 ttgctgtttg aggccatctc aaaaacaact ctggtggtga cggggaaact gaccgccaga
     2341 ccctcaccgg aaaagaactc gttctccgac gcaggccaga gcgtgccgac ttgcccggtc
     2401 ttatagtcaa cgtagttcag cgttcgtgcg tagttccaac cgcggaagat tgaaatcacg
     2461 tggttgggcg caactcgata cgcgccgtag tacttctcga gcgtggcaag cgtcacgttc
     2521 gcccacggcg tgagcccgaa cattcctttt gattcaccgt aaacaaaatt tcctgagatg
     2581 gtgttgcctt ttcgatgccc gtcgaaaatt acttttcgcg tctgcacggg aacttccaaa
     2641 tgcaaactat ccccggtttg cttcatattc tcgagcggca cattgatcgc gttttcactg
     2701 cctccgtagt aaggcgaaat cacatcggcg gtgccacccg aattttggcc ttgggcgctg
     2761 aatcgaacat tcactgccac ccatttctca tccagccaga acccgcccgt ccaaacgctg
     2821 ccgggcagag gctgtgcgac agcagaagta accatgccgg acaggagcag cagcaaaata
     2881 agaaccaggc tgctggtggc gtttgttaca tccaggtttt tgcagagatc ctttttcatc
     2941 gcagaacggc cggcagaaca tatcggttca ttatgctgaa gacctgagcg tgcatgtacc
     3001 atttgccata ggcggtgccg gtaatgacga cgaccagcgg ttgatctttg aagacgaaga
     3061 tcttgcttcc gccattgccg gtggcgaaaa acgcctcata atgcttgcca ccgatcttga
     3121 aggtagtgtt ccagaacagg tatccgtaaa aatcctcgcc tccaggggat agagctattt
     3181 gtttcgtcaa agttttctgc acccagtcgc gcgccagcaa ttgtttgccg tgccatctgc
     3241 ccccctgctg gtaaagctgc ccgtacttcg cgaaatcaag agcgctcatt tggagaccac
     3301 ccgccgtgct gggaactttt tgcggcgtgt attgccattc gtatttagtg atacccagcg
     3361 gtctgaacaa cttacgatcg gcgtactttt ccaacccctc aggcacggat ttgttaatga
     3421 tgtctcccag gagcaccaca ccggtagtga aatacgccca cttttcgccg gtatttcttt
     3481 tcggatccat cggtaaatcc agtgcgaact ttatccagtc gccagtggga tacatcttct
     3541 cttcattgcc cggagaattt gcgtcatcgt cattgccgtc gaaggctgag ctcatcgtca
     3601 gcaagctttt aatcgtcacg ctctcttttt taggagagta gttggcaaac tttttgagat
     3661 cgtagaag
//
LOCUS       DATDBY010000277         2804 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_211319, whole genome shotgun sequence.
ACCESSION   DATDBY010000277 DATDBY010000000
VERSION     DATDBY010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2804
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211319"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1259
                     /locus_tag="VIT19_05160"
     CDS             <1..1259
                     /locus_tag="VIT19_05160"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5838405.1"
                     /translation="TMLLRSDILENLWMALGTLRANKLRSFLTVFGVIIGVITVMLIA
                     SIIAGVDTAVTKEVESFGTRSMYISKYDPGIQVGRRSREERMRKPLTYDDAIALSQLP
                     TVEVSVPFLDITSNFFGRKINVSGGGKTSASVALQGTLPDFEKAGTQVVSEGRFFSQY
                     ENDANQKVCVIGSKVADDFFRFGSPIEEKIKIDQEEFRVVGVLQKREQFLFSGGSDDQ
                     NNVIYLPYNVARKVKPNEDDIYILAVAKPGMMRQAMDQVVDTLRVRRQVPFGSRDNFG
                     IETTESLIQTFRSITGGVAVAMVVISSVGLMVGGIGVMNIMLVSVTERTREIGVRKAL
                     GARRKDIMVQFLVEAATLTGFGGLMGLLLGWLLTLVVRLIMPSYVPLWAPIAGFVASV
                     GIGVIFGLWPAWKAARLDPIESLRYE"
     gene            complement(1354..2352)
                     /locus_tag="VIT19_05165"
     CDS             complement(1354..2352)
                     /locus_tag="VIT19_05165"
                     /inference="COORDINATES: protein motif:HMM:NF016764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YIP1 family protein"
                     /protein_id="HEY5838406.1"
                     /translation="MSDPNQEFHAPPPPPIQTEPERQRPTWLMWTGIALFVIGLLIVG
                     LGLLGVLPGMASSGGSVCALGILFFAFSFMRLPAIPDAPPRMSTVQTLVGIFFEPTRV
                     FRNLRAHPQWLAAIFIAGILSGAYINTFHYRLTPDRVVGFKWDAIEQGPFKPPPEQLA
                     QQRQTELDVQKSTAGKIGNVISSVVGSFFMMAFVAALCLLGVIAFGGRMHYWQAFSVV
                     AYVQFPFTVIEKGISFLVLFLKAPEDVHPILGQQTLVYDNLGLLVSSKEHPVLYVIMA
                     AIGVLSFYRLWLTATGLREGGYKVSSTAGWGVSITLFILFLLLGIALAAFFPSFLG"
     gene            complement(2448..>2804)
                     /locus_tag="VIT19_05170"
     CDS             complement(2448..>2804)
                     /locus_tag="VIT19_05170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838407.1"
                     /translation="IWTYATLPATVLWLIVNVVTLFVWPPSSDVAIATGAAGVFPSNL
                     GALFTVELLPIPVYVAALSAFDVFKFYGLALAVLGLRKVANIPWLGAFAIVAFVWLLG
                     VMWLVSTAGLASALLK"
BASE COUNT          661 a          774 c          789 g          580 t
ORIGIN      
        1 ttacgatgct tttacgttct gacattctcg agaacctttg gatggcgctg ggcactttgc
       61 gcgcgaataa gctgcgctcg tttctgacgg tctttggcgt catcatcggc gtgatcacgg
      121 tgatgctgat cgcgtcgatc atcgcgggcg tggacacggc ggtgacgaaa gaagtcgaat
      181 cgttcggcac ccgctcaatg tatatcagca agtacgatcc cgggattcag gtcggccggc
      241 gttcgcgcga agagcgcatg cgcaagccgc tgacctatga cgacgcgatc gcattgtcac
      301 aactgccaac ggtcgaagtc tcggtcccct ttctcgacat cacaagtaac ttctttggcc
      361 ggaagataaa tgtcagcggc ggcggcaaaa cgtcggcgtc ggttgcgctt cagggcacgc
      421 tgcccgactt cgaaaaagcc ggcacacagg tggtttcgga aggtcggttc ttttcacagt
      481 acgagaacga cgcgaatcag aaggtgtgtg tgatcggctc aaaagtcgcc gacgacttct
      541 tccggttcgg ctcgcccatc gaggaaaaaa tcaagatcga ccaggaagag tttcgcgtgg
      601 taggggtgct gcaaaagcgc gagcagtttt tgttcagtgg cggcagtgac gatcaaaaca
      661 atgtcatcta cctgccatat aacgtcgcgc gcaaagttaa accgaacgag gacgatatct
      721 acattctcgc cgtggcaaaa cccggcatga tgcggcaggc aatggatcag gttgtcgata
      781 cgttgcgcgt gcggcgccag gtgccgttcg gctcccggga caacttcgga attgagacga
      841 ctgagtcact catccagacg tttcgttcga ttaccggcgg cgtcgcggtc gccatggtcg
      901 tgatttcttc ggttggattg atggtcggcg gcatcggcgt gatgaacatc atgcttgtgt
      961 cggtgactga acgcacgcgc gaaatcggag tgcgcaaagc cctcggcgcg cgtcgcaaag
     1021 acatcatggt tcagttcctg gtcgaagccg caacgctgac tggcttcggt gggctgatgg
     1081 gactcttact cggttggctg ctgacgctgg tcgtgagatt gatcatgccg tcgtacgtgc
     1141 ctttgtgggc gccgattgcg ggctttgtcg ccagcgtcgg cattggcgtg atcttcggac
     1201 tatggccggc gtggaaggcc gcgcggctcg atccaattga atcgctaaga tatgaatagc
     1261 taagagcaaa gaggtaaggg ctaagagtcg acgcctaact gcgcttaacc cttggccctt
     1321 tgctcttggc ccttcgctct tggcccttcg ccgctatccc aggaagctcg ggaagaatgc
     1381 cgccagcgct attcccaaca gcaggaacag gatgaagagc gtaatcgaca cgccccaacc
     1441 tgcggtagag ctaactttgt agcctccctc tcttaatccg gtagcagtta accaaagccg
     1501 atagaacgac agcactccga ttgccgccat aattacgtac agcaccggat gttcctttga
     1561 ggacaccaac aacccaaggt tgtcgtacac caatgtctgt tgacccagaa tagggtggac
     1621 gtcctctggc gctttgagaa agaggaccag gaagctaatc cccttttcga tcactgtaaa
     1681 cggaaactgc acataggcta ctacggaaaa cgcttgccag taatgcattc gtccgccaaa
     1741 cgcaatcacc cctaacagac aaagcgccgc gacgaatgcc atcatgaaga aactccccac
     1801 gacagaactt attacgttgc cgattttccc cgcggtggat ttttggacat caagctccgt
     1861 ttgtctctgt tgggctaact gctccggtgg cggcttgaac ggaccctgct cgatagcatc
     1921 ccatttgaag ccaacgactc gatcaggggt taatcggtaa tggaaagtat tgatgtacgc
     1981 tccgctaaga atcccggcaa tgaaaatcgc cgccaaccat tgcggatgcg cccgcaggtt
     2041 gcgaaacact cgggtcggct caaagaagat tcccacgagc gtttgaacgg tggacatgcg
     2101 gggcggtgcg tccgggatcg cgggcaaacg catgaagctg aaggcaaaaa acaaaatgcc
     2161 caaggcgcaa acactcccgc ccgaactagc cattcctgga aggacgccta aaagtcccaa
     2221 gccgacgatg aggagtccaa tcacaaacaa agcgataccg gtccacatca gccaggtcgg
     2281 gcgctgacgc tctggttcag tttggattgg cggcggcggt ggtgcgtgaa actcctgatt
     2341 tgggtcgctc atgttttctc ctctgtaaga ggacggggag actgccttcc gtcccaattg
     2401 ttttcttcga cactcttacg cgccgaaagg gcgcgaggtt tcgtcagtca tttcagcagc
     2461 gcgcttgcga gcccagccgt cgacaccagc cacatcacgc caagtagcca gacaaaggct
     2521 acgatcgcaa acgcgccaag ccagggaatg tttgcgactt tgcgcaagcc gagcacagca
     2581 agggccaatc cgtaaaattt gaagacgtca aacgcgctga gggcggcgac gtaaaccggg
     2641 atcggcagca actcgaccgt aaacaacgct ccaagattgc tggggaaaac accggctgcg
     2701 ccagttgcga tcgccacgtc gctcgacggc ggccaaacaa acagcgttac gacattcacg
     2761 attagccaca aaacagtagc cggcaaagtc gcatacgtcc aaat
//
LOCUS       DATDBY010000278         2526 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_300994, whole genome shotgun sequence.
ACCESSION   DATDBY010000278 DATDBY010000000
VERSION     DATDBY010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300994"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(146..922)
                     /locus_tag="VIT19_05175"
     CDS             complement(146..922)
                     /locus_tag="VIT19_05175"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEY5838408.1"
                     /translation="MNERVLLVAPASKLTPQLESAGFQTITWPPLQLTPPDNFAALDE
                     AIANLYGYAWIIFIDSDAVRFFVERVQQQSREVSDLDTLRVCAIGEATGAALEHARVH
                     VDVVATQTNPFTIVEQLATYAGGNEHLDRLNFLLPQAAIGRDYLKEQIESIGARADVV
                     VSYQTVANADLTRLAGLQSMLLTGSVDAVVFATPDEVFKLSRVFDTNNLGRLFRNTLV
                     LAIGEATANAAEAAGISQPLQPDASAPHAITELLAKRFGV"
     gene            1051..2337
                     /locus_tag="VIT19_05180"
     CDS             1051..2337
                     /locus_tag="VIT19_05180"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5838409.1"
                     /translation="MSQATRVLALLISLAFVGQSLIAQPQKKPPVAAPQKPAKVEQVE
                     EAPAEQDLETLKVDTNLVTVPVIASSRTGRYIADLVKEEFKISEDGVAQEIAFLATVS
                     APFTLVLLLDTSGSTKEKLPTIQRAAMAFVEQLSSTDKVKVISFDDSVRDWNEFTSDK
                     AVIRKAISQTVPGEGSKVYDAVELSLNNLRPVSGRRAIVVFTDGVDWHSDRGGSYEGT
                     LKNLDESGVIIYPIRFDTRAETEAIARRQAGEQTGIGLPTSDVIRQGTTPSTFPSEDP
                     ASDPNRRGQGKSPLEMILSRPVRRPIPTETPQGSPTDFPDAAGGRRPPIDPGPAPNRR
                     PSPDDSIKGMLDQAYFLADSYLKELADRSGGQVHRADTLAMLPQAFAAIAAELRTQYS
                     LGYYPTNREKNGKYRKIQVKTTRTDVAIRARPGYRR"
BASE COUNT          551 a          717 c          741 g          517 t
ORIGIN      
        1 ttgtttggtt cggcgagtac ttcgtagcca agcgtcttca actgatcgcg caaagcatgc
       61 gaaaagtttc gatcgctgtc gatgatgagc acgcggcctt tcatccgttt cagtttagca
      121 cagcgcaaat gacgggctgt cgaggttaaa ccccgaagcg tttcgccagt agttcagtga
      181 ttgcgtgcgg tgcagacgcg tccggttgca gcggctgcga aatgccggcg gcttcggccg
      241 cgttcgctgt cgcttcgcca atggcgagca ccaacgtgtt cctaaaaagt cgacccagat
      301 tgttggtgtc gaacactcgg gacagtttga acacctcatc aggggtggcg aacacgacag
      361 cgtcgacgct gccggtgagc agcatgcttt gcagacccgc taatcgcgtc aagtcagcat
      421 tggcgaccgt ctggtacgaa acgaccacgt ccgcgcgagc accaatgctt tcaatttgtt
      481 ctttcagata atcgcggcca atcgcggctt ggggcaacaa aaagttcagg cgatccaggt
      541 gttcgttgcc gccggcgtac gtggccaact gttcgacgat tgtgaacgga ttggtttgcg
      601 tcgccacgac atcgacatga actcgcgcgt gttcaagcgc ggcgcctgtc gcttcgccaa
      661 ttgcgcatac acggagcgta tcgagatcgc taacttcccg tgactgctgc tggactcgct
      721 cgacaaagaa gcgaactgcg tcggagtcta tgaagataat ccaggcgtag ccgtaaaggt
      781 tcgcgatcgc ctcatcgaga gccgcgaaat tgtcaggcgg cgtcaactgc agcggcggcc
      841 acgtgatggt ttgaaaaccc gctgattcga gttgcggagt cagctttgac gccggggcaa
      901 cgagcagaac acgttcattc atcggacata cgagagatcg tcaaaccgcg cgcggatgag
      961 atagatcata gttggattcg cgccgaaacg tgtttacaat accgcgtctc tccaaatagt
     1021 tcgattcacc gcagtccggc gcttcttcca atgtcacagg caactcgagt tttggcactg
     1081 ctgatcagtc tcgcttttgt ggggcagtct ttgattgctc agcctcagaa gaagccgcca
     1141 gtggctgctc cgcaaaaacc ggctaaggtt gagcaggtcg aggaggctcc cgccgaacag
     1201 gatttggaga ctctaaaagt cgacacaaac ctggtgacgg ttccggtcat tgccagttcg
     1261 cgcaccggaa ggtacatcgc cgacctggtc aaagaagaat tcaagatttc cgaggacggc
     1321 gtcgcccagg agatcgcgtt tctcgcaacg gttagcgcgc ccttcacctt agtgctgctt
     1381 cttgatacca gcggcagcac aaaagaaaag ttgccgacga ttcagcgggc ggcgatggcg
     1441 tttgtcgagc agttaagctc aaccgacaaa gtgaaggtga tctcgttcga cgattcagtg
     1501 cgcgactgga atgagttcac gtcggacaaa gccgtcattc gcaaggctat ctcgcaaacc
     1561 gtgccgggtg agggatcgaa ggtctacgac gcggttgagc tctcgctgaa taatctgcga
     1621 ccggttagtg ggcggcgtgc catcgtggtg ttcacggatg gtgtcgactg gcacagcgac
     1681 aggggaggga gttacgaggg aacgctaaag aacctggacg aaagcggtgt gatcatctat
     1741 ccgattcgtt tcgatacccg cgcggagact gaagcgatcg cgcgacgtca ggcgggggag
     1801 cagactggga tcggcttgcc tacgagcgac gtcattcgcc agggcaccac cccttccacc
     1861 tttccttctg aagatcccgc ctccgatccg aatcggcggg gccagggcaa atcgccgttg
     1921 gagatgattc tcagccgccc ggtgcggcgt ccgatcccga cagaaacccc gcaaggatcg
     1981 cctaccgatt ttcccgacgc tgctggtggc cggagaccgc caatcgatcc cggtccggcg
     2041 ccgaacaggc gcccatcgcc cgacgactcg attaaaggga tgctcgacca ggcgtatttc
     2101 ctggcggaca gctacttgaa agaactcgct gaccgttcgg gcggacaggt gcatcgcgcc
     2161 gacactctcg cgatgctgcc gcaggcgttc gccgccatcg cggcagagtt gcgcacgcaa
     2221 tattcgctcg ggtactaccc gacgaaccgt gaaaagaacg ggaagtaccg caagattcag
     2281 gtcaagacta cgcgcacaga cgtcgcgatt cgcgcgcggc ccggctatcg ccgttaattt
     2341 gcggctaaag agaagaaaga aaatgttttt tgtctttcgt gcgctagagc cctcacccta
     2401 accctctccc aaagggagag gggaaccacg atccaaagcg gcgtcgcgcc cccgcttgcc
     2461 gccgcactcc aaattgaact tgtcgctgac gaatcccgcg tgttagtttt tcactcggcc
     2521 tggcga
//
LOCUS       DATDBY010000279         5433 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_620999, whole genome shotgun sequence.
ACCESSION   DATDBY010000279 DATDBY010000000
VERSION     DATDBY010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5433
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_620999"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..543
                     /locus_tag="VIT19_05185"
     CDS             <1..543
                     /locus_tag="VIT19_05185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838410.1"
                     /translation="LAVVQRNIFENTYDAQTMGRGGFILLPRGLEVRLVLKNSAGAPM
                     PAGLVTMYQREGAISQIVGQDRIGFVPPNGEFSLSQGRSTTIFGTRRVLERRVVDKRV
                     GNESDNKLVTKVEVVLMNRGSAPAEAFVREGIERYDDNEWKIIESSVSAEPLGANTVQ
                     FKATVPAGGKVTITYTVESD"
     gene            complement(655..1347)
                     /locus_tag="VIT19_05190"
     CDS             complement(655..1347)
                     /locus_tag="VIT19_05190"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEY5838411.1"
                     /translation="MSLRLGDTAPNFTAQTTEGSIDFHEWIGDSWAVLFSHPKDFTPV
                     CTTELGYMASIKPEFDKRNVKVMGLSVDPVENHARWSTDIADATGHAPNYPMIGDTDL
                     AVAKLYDMLPAATGGTSEGRTAADNMTVRTVFVIGPDKKIKLMFVYPMGTGRNFDEVL
                     RVIDSIQLTANHSVATPANWKDGDDVIIVPALNDEAAKEKFPDGWKTVKPYLRVVPQP
                     NKKKTDTATAGS"
     gene            complement(1488..2231)
                     /locus_tag="VIT19_05195"
     CDS             complement(1488..2231)
                     /locus_tag="VIT19_05195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838412.1"
                     /translation="MNENPDSDSPSQKTFLPHGFWYIVIVGFVLFALLLWLSRAFVAT
                     TEKYTFLVLGGANTLIFLAILVQALIYRRQWDAMQASLYENRKLVAQNERAVKAAEDS
                     VEIGHRAYVLVSSAKPDFSSEQSFIVEFELTNYGNTPANYVRVSHRLELLKEEPKNLK
                     NSSIDWNTPRSSIIAPHSSHPVPYRIKLDISREQYQAFHSKALRLYFWGSIRYRDIFG
                     KIHYSRFRLVHFPGQGPKFGDCQGGNEAD"
     gene            complement(2255..3052)
                     /gene="lpxI"
                     /locus_tag="VIT19_05200"
     CDS             complement(2255..3052)
                     /gene="lpxI"
                     /locus_tag="VIT19_05200"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF037151.4"
                     /note="LpxI, functionally equivalent to LpxH, replaces it
                     in LPS biosynthesis in a minority of bacteria; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase LpxI"
                     /protein_id="HEY5838413.1"
                     /translation="MKLGLIAGNGTFPFLVLEGAQKAGAQIAVAAIREETDPLIEKVS
                     DNVTWVGVGQLGKMLRFFKKEGVEKAIMAGQVKHVQIFSSSIPDLRMVKMLLRLPRKN
                     TDALIGAVANELASEGIELIDSTYFLQEHLPQPGVLTKRKPDERERGDIEYGLEVAHE
                     IARLDLGQTIVVRDRACVAIEAMEGTDAVIRRAGDLVRGRLTVVKIAKPAQDMRFDVP
                     VVGLSTIQMMIEAGATCLCLTAGKTLMFERDQMTALANRNKIAITAV"
     gene            complement(3252..4052)
                     /gene="lpxA"
                     /locus_tag="VIT19_05205"
     CDS             complement(3252..4052)
                     /gene="lpxA"
                     /locus_tag="VIT19_05205"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: protein motif:HMM:NF003657.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEY5838414.1"
                     /translation="MQSEKQSQSSQIHSSAIVSPRARIGDGCYIGPYVTIGDNVELGN
                     GVRIDSHVVIDGRTRIGDETHIYPFVSIGLPPQDLKFAGEDTETEIGARNRIREFVTI
                     HRGTRGGGGITRTGDDCFLMAQTHIAHDCLIGNNVIMANAATLAGHVIVQDSANIGAY
                     SGVHQFCRVGREAYVGGYSVVVKDALPFALTVGNHAKCYGLNKVGMRRRGYSRETMEA
                     LHHAFHLLLTAKLNTSQAVEKIRAEISGIPEVEELIAFIETSHRGVVK"
     gene            complement(4076..4555)
                     /gene="fabZ"
                     /locus_tag="VIT19_05210"
     CDS             complement(4076..4555)
                     /gene="fabZ"
                     /locus_tag="VIT19_05210"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: protein motif:HMM:TIGR01750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEY5838415.1"
                     /translation="MENDRWKMIFPMETVLDSEGIKKLLPHRYPFLLVDRIIELIPRT
                     RVVGIKQVSINEEYFQGHFPGAPVMPGVLVIEALAQCGAILALREIENRDQKLVLFTG
                     IKEARFRRPVVPGDTLVLEVTALRTGSRIQRMRGEAKVNGQICADAELTSVIADREP"
     gene            complement(4639..5238)
                     /locus_tag="VIT19_05215"
     CDS             complement(4639..5238)
                     /locus_tag="VIT19_05215"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEY5838416.1"
                     /translation="MKRILLPLLLVTISAAASAQTPGTTTSAPPQTAAVPRSKIAVIY
                     SGAFQDAKEGITRFAATVTKLNAEFQPLQNELNQTAQRLNALQEEIKKMQQGATPATP
                     QQIQVKINQFDEQKKAYDRKGEDARLNYQKRRGELLMPLQEDVGKALDVFGKANGITM
                     IIDGTQVPLVYAADTIDITKAFIADYNRKNPATAAVTPR"
BASE COUNT         1170 a         1504 c         1485 g         1274 t
ORIGIN      
        1 ctcgcggttg tccaacgaaa catcttcgag aacacttacg acgcgcaaac aatgggacgc
       61 ggcggcttca ttctgctgcc gcgcggatta gaagtgcggc tggtattgaa aaactctgcc
      121 ggcgcaccga tgcccgccgg actggtcacg atgtatcagc gcgaaggcgc catttcgcag
      181 atcgtcggac aggatcgcat cggtttcgtc ccgccaaatg gcgagttcag ccttagccag
      241 ggccgctcaa ccacaatctt cggcacccgg cgggttttgg aacggcgggt cgtagacaag
      301 cgcgtaggaa atgagagcga taacaagctg gtgacgaaag tcgaagtcgt tttgatgaac
      361 cggggctccg cacccgccga agccttcgtc cgggaaggca tcgaacgtta cgacgacaat
      421 gaatggaaga tcattgaaag ttccgtttca gctgagccgc tcggcgccaa caccgttcag
      481 ttcaaagcaa cggtgcccgc cggtggcaag gtgaccatca cctacacggt cgaaagtgac
      541 taggccgcgg cgcacacaca aaaaggcgca gagtgtttgc cactccgcgc ctttaacttt
      601 gggttgcgtg cccggtactg acacgctcga gatgactcaa agcgaactga gccctcaaga
      661 gccggcggtc gccgtgtcgg tcttcttctt attcggctgc gggacgacgc gcaggtaagg
      721 cttgaccgtc ttccaaccgt ccgggaattt ttctttcgcc gcttcgtcgt tgagcgccgg
      781 cacaatgatc acgtcgtcgc cgtctttcca attcgccggc gtcgcgacac tgtggttcgc
      841 agtcaactgg atcgaatcga tcacgcgcag gacttcatcg aagttccggc ccgtccccat
      901 cggatagacg aacatcagtt tgatcttctt gtccgggcca atgacgaaga cggtccgcac
      961 cgtcatgttg tctgcggccg tgcgcccttc agaagttccg cccgtcgcgg cgggcaacat
     1021 gtcataaagt ttagccactg ccaggtcggt atcgccgatc atcgggtaat tcggcgcgtg
     1081 accggtcgca tctgcgatat cagtggacca gcgcgcgtgg ttttcgaccg gatcaacgct
     1141 tagtcccatg accttcacgt tgcgcttgtc gaattcaggt ttgatgctgg ccatgtagcc
     1201 gagttcggtg gtgcaaaccg gcgtaaagtc cttcggatgt gaaaacaaaa ccgcccaact
     1261 gtcgccaatc cattcgtgaa aatcgattga tccttcagtc gtttgggccg tgaaattcgg
     1321 cgccgtgtct cctaagcgta gtgacatgat tgtattcctc cctgaaagaa acttttgaga
     1381 acgaaatgct tcgctgaaag ctgattatga ccggggttta tggtgagggt tttattccca
     1441 ttcgacgccc aagtcaagcg catcgacgga tgcggcgctg acacttctca gtctgcctca
     1501 tttccccctt ggcaatcccc aaatttcggt ccctgtccgg gaaaatggac aaggcgaaaa
     1561 cgcgagtagt gaatcttccc aaaaatgtct ctgtagcgaa tgctacccca gaagtacaat
     1621 cttagcgctt ttgaatgaaa ggcttgatat tgctcacgtg atatatccag tttgattcga
     1681 taaggcaccg ggtgagatga gtgtggggcg attattgagc tgcgcggagt gttccagtct
     1741 atagagctgt tcttcaggtt cttaggttct tctttcagaa gttcaagtcg atgacttaca
     1801 cgaacgtagt tagcgggagt gttgccatag ttggttagct cgaactccac gataaagctt
     1861 tgttcactac tgaagtccgg ttttgcactt gatactaaaa catatgcccg atgaccaatt
     1921 tcaacgctat cttcagcagc tttaaccgct cgctcgttct gtgcaaccag ttttcggttt
     1981 tcatacagac tcgcctgcat agcatcccac tgccggcgat agatcaaggc ttggacaaga
     2041 attgccaaga agatcaatgt atttgcgcca ccaagaacta agaaagtgta tttttcagta
     2101 gtagcgacga atgcgcggga caaccaaagc aggagagcaa agagaacaaa ccccactatc
     2161 acgatgtacc agaagccgtg gggtaggaag gttttttggc tcgggctgtc gctatccgga
     2221 ttttcgttca tgctgagact caagtgcgtg accgctacac tgcggttatc gcgattttgt
     2281 ttctgtttgc cagcgccgtc atctggtcgc gctcaaacat cagagttttc ccggcggtca
     2341 gacacaagca cgtggccccg gcttcgatca tcatttgaat cgttgagaga ccaaccacgg
     2401 gcacatcgaa ccgcatgtcc tgagcgggct tagcgatctt cacgacggtt aaacggccgc
     2461 gcaccaggtc gccggcgcga cgaatcacgg catcagtgcc ttccatcgcc tcaatcgcaa
     2521 cgcaggcgcg gtcgcgaacg acgatagttt ggccaaggtc gaggcgcgcg atctcgtgcg
     2581 ctacttcgag tccgtattcg atgtcgccac gctcgcgttc gtcaggcttc cgtttggtca
     2641 ggacccccgg ttgcggcaga tgctcctgca aaaaataggt tgaatcgatg agctcaattc
     2701 cttcacttgc cagttcattg gcgactgcgc cgatcaacgc gtcagtgttc ttgcgcggca
     2761 gacggagaag cattttcacc atacgcagat cgggaatcga gctgctgaaa atctgcacgt
     2821 gcttgacctg gccggccatg atggctttct cgacgccttc ttttttgaaa aagcggagca
     2881 tcttgccgag ctggccgacg ccaacccagg tcacgttgtc tgaaactttt tcgattagcg
     2941 ggtcagtctc ttcgcgaata gccgcgacgg cgatctgcgc gccggctttc tgcgcacctt
     3001 cgaggaccag gaacggaaag gtaccgtttc ccgcgataag tccgagcttc attggactgc
     3061 cattgctttc acgtagccca ggcgtttacg ccgggggaga aacgagcaaa aaaacccaag
     3121 cctcccttag gaggcttcta aggctaattc aaaaagcccc ataaatgggg cagaaaactt
     3181 tcgtccacgc tttcccaggc gtaaacgcct gggctacgca aaagatcaga gttcttacgc
     3241 ctcgccgtta atcacttcac taccccacgg tgcgaagtct cgataaacgc gatcagttcc
     3301 tcaacttccg ggatgccact aatctccgct cggatctttt caacggcttg cgaggtgttg
     3361 agtttcgcag tcagcaataa atgaaaggcg tgatggagcg cctccatcgt ctcacgcgag
     3421 tagccgcgcc ggcgcatgcc gactttgttc aggccgtaac actttgcgtg attaccaacc
     3481 gtgagcgcga agggcagagc gtctttcacc accaccgagt agccaccgac gtaggcctca
     3541 cggccaacgc gacagaactg gtgcacgcct gagtacgcgc cgatgttggc gctgtcctgc
     3601 acgatgacgt ggcccgcaag cgtggcagcg ttggccataa tcacgttgtt accgatcagg
     3661 caatcgtgcg cgatatgtgt ttgcgccatc aggaagcaat cgtcaccagt gcgggtgata
     3721 ccgccaccgc ccctggtgcc gcggtgaatc gtgacgaatt cgcggatgcg attgcgggcg
     3781 ccgatctcag tctcagtatc ttcgccggca aatttcaggt cctgtggcgg caggccaatc
     3841 gaaacgaagg gatagatgtg tgtttcatcg ccgatgcgtg tgcggccgtc gatcacaacg
     3901 tgcgagtcga tgcgcacgcc gttaccgagt tcaacgttgt cgccaatcgt cacgtacggg
     3961 ccgatgtagc aaccgtcgcc aattcgcgcg cgggggctga cgatggcaga cgaatgaatc
     4021 tgacttgatt gcgactgttt ctcgctttgc atgaatggag aactcatcgt gaggtttaag
     4081 gttctcgatc ggcgatcacg ctcgtaagtt cggcatccgc gcaaatctgc ccgttaactt
     4141 ttgcttcgcc gcgcatgcgc tgaatgcgcg agccggtgcg caacgccgtc acttccagca
     4201 ccaaagtgtc gccgggcacc accgggcgcc gaaaacgcgc ttccttaatg ccggtaaaga
     4261 gcacgagctt ttgatcgcga ttttcgattt cacgcagcgc caggatcgcg ccgcattggg
     4321 cgagcgcttc aatcaccaga acgcccggca tcaccggcgc gcccggaaag tggccctgaa
     4381 aatactcttc gttgatgctg acttgcttga tgccgacgac gcgcgtgcgg ggtatgagtt
     4441 cgatgatccg atcgacaagc agaaacggat agcggtgcgg gagaagtttt tttattcctt
     4501 cagagtcgag aacggtttcc atcggaaaga tcattttcca tctgtcattt tccatttctc
     4561 atttgctcaa cggccaacac catctgcttg accggtcaat cacaaaatga aagatatcaa
     4621 atgacgaaaa tggtttagtt accgcggcgt tactgcggca gttgccgggt tcttgcgatt
     4681 gtaatccgcg atgaacgctt tcgttatgtc gatagtgtcg gcggcgtaaa ccagcggcac
     4741 ctgagtccca tcgataatca tggtaatgcc attcgccttg ccgaacacgt cgagtgcctt
     4801 gccgacatct tcctgcaacg gcatcagcag ttcgccgcgg cgcttttgat aatttagccg
     4861 cgcgtcttca cctttgcggt cgtaagcctt cttttgttcg tcaaactgat tgattttcac
     4921 ctgaatctgc tgcggcgtcg cgggcgtggc gccctgctgc atcttcttga tttcttcctg
     4981 cagggcgttc aatctttgcg ccgtctggtt cagctcgttt tgcagcggct gaaactcagc
     5041 gttcagtttg gtaacagtcg cggcaaaccg tgtgatgccc tctttcgcat cctggaaggc
     5101 tccggaatag atgacggcga tcttgctgcg tggtacggcc gccgtttgtg gcggggccga
     5161 agtggtcgtg cctggcgtct gggcagacgc ggccgctgag atcgtaacga gcaaaagtgg
     5221 caacaaaatt cgtttcatag ttagttactt aacggcgaaa tgcggagaga ggcaaatggc
     5281 caatctccgc atctggttct gttcatcagg ctgcggctac ttcggcggcg tcaacgacgc
     5341 ggtcgccggg ttcttgctgt tgaattcagc aatgaaggcg cgcgtaatat ccatcgcgtc
     5401 cgccgcgctc acgataccct gaactttcgt gac
//
LOCUS       DATDBY010000280         2872 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1853928, whole genome shotgun sequence.
ACCESSION   DATDBY010000280 DATDBY010000000
VERSION     DATDBY010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2872
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1853928"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..843
                     /locus_tag="VIT19_05220"
     CDS             <1..843
                     /locus_tag="VIT19_05220"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HEY5838417.1"
                     /translation="DVLDVRVFNKPQFSRDGVRVDGRGMIRMPFIDGEIQAACMTEQQ
                     LADDIGTRYVDYLRSPQVDVFIREFQSQPVAVLGAVRAPSRFQLQRRVRLLELLSFAG
                     GPTDNAGRTIQVVHTTTSAACTDAGQLETNELEASALDNYKLDETLNGADAANPFVRP
                     GDVVSIAEADQAYVVGNVLRPSAIPLKENITVSRAIAMSGGLMPDTKTDRVRIVRQPP
                     GSAAKTEIFVDLKAIDRRNAEDVVLQAGDIVDVPVSGGKRLLRSLIGAVVPSIAQLPT
                     RVIP"
     gene            865..>2872
                     /locus_tag="VIT19_05225"
     CDS             865..>2872
                     /locus_tag="VIT19_05225"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide transport family protein"
                     /protein_id="HEY5838418.1"
                     /translation="MNTTDPNTNNSTTALGKRAEAVLTPTYSYDYDNPAEATTGYSRL
                     HDYIRSARNHVWLIIGIVVVITTLVGFYMVRQPDVYEATAHVQVDLEAQNPALGSVKS
                     NAFILNAPSQDPTYFNTQIQILSSAGLLSRVVKTLDLEHNREFFSSGSSDSSMWGSVK
                     RTIGFGATDNPQNKALAERVAVNSLAPQTSRDDMAEMNRLAPYVEMLQRRLSVKPITE
                     TRLIEIRFKHADPQVASKVLNAIADAFVYSNLERKTETSDKAGDFLQKRIAELQTEIR
                     SGEERLINYAKENQILSLDANQNTVVDRLSGLNKQLLEAENERKVAEANYRASLSPGA
                     AEALAEGQAKEAADAGTKLTDLKQKRAQLLVEYKEKYPEVQEVDQQIAVLEKQIKDSR
                     NRATTTVTTNLETRYRQAAGREQSLRAAFDRQRGEMLSQNEAAVNYRIIQQEIETNKG
                     LLDGLLQRAKENDVMMAGTPNNIHVVDYAPVPKSPVGPKRAQSMALAALVALILGIAL
                     ARYLDYLDDTIHSSDDVEKSLRLPALAVIPAIRASTRLRLASSMTGLQLQKNGNVLSN
                     SARPELLLNADSTSPLAEAFRHLRTSILLSNAGGAPQTLLVTSSQPSEGKTTTAVNTA
                     LILKQTGAKVLVIDADMRRPRLHSVFDMENKRGLSTILASKMNEE"
BASE COUNT          654 a          854 c          830 g          534 t
ORIGIN      
        1 gatgttctgg acgttcgcgt cttcaacaag ccgcagtttt cgcgcgacgg cgtgcgggtg
       61 gacggccgcg ggatgattcg gatgccgttt atcgacggcg aaatccaggc ggcctgcatg
      121 actgagcagc agctggccga cgacatcggc actcgctatg tcgattacct gcgcagtccg
      181 caggttgacg ttttcattcg cgagttccag tcgcagccgg tcgcggtgct cggagccgta
      241 cgcgcgccca gccgctttca acttcagcgc cgcgtgcgct tgctcgaact gctttccttc
      301 gccggtgggc cgactgacaa cgccggccga acgattcagg tcgtgcacac cacgacgagt
      361 gcggcgtgca ccgatgcggg tcagttggaa acgaatgagc tggaagcaag cgcgctcgac
      421 aactacaaac tcgacgaaac tttgaacggc gcagacgcag cgaatccgtt cgtgcgaccg
      481 ggcgacgtgg tttcgatcgc tgaagctgat caggcttatg tcgtcggcaa tgtgctgcgc
      541 ccgtccgcga ttccgctcaa agaaaacatc accgtttcgc gcgccatcgc catgagcggc
      601 ggcttgatgc cggacacgaa gaccgatcgc gtccgcattg ttcgccaacc gcccggcagc
      661 gcggccaaga cggaaatttt tgttgacctg aaagcgatcg atcgccgcaa cgctgaggat
      721 gtggtgctgc aagccggtga catcgtcgat gtgcccgtct cgggcggcaa gcgcctgcta
      781 cggagtttga tcggcgctgt cgttccatca atcgcccaac tgccgacccg cgtaattccc
      841 taattgagga ctttgggaga aaccatgaac acaacagatc caaatacgaa caattcgacg
      901 acggcgctgg gaaagcgtgc tgaggctgtt ttaacgccga cctacagcta cgattatgac
      961 aacccggccg aagcgaccac gggctattcg cggctgcacg actacattcg ttcagctcgc
     1021 aatcacgtct ggctgatcat cggcatcgtc gtcgtcatca ccacgctggt cggcttttac
     1081 atggtgcgcc agcccgatgt gtacgaagcc acggcgcacg tgcaggttga tctcgaagct
     1141 cagaatcccg cgctgggatc ggtcaaaagc aacgcgttca ttctcaacgc gccgtcccag
     1201 gacccgacgt acttcaatac gcagattcaa attctctcga gcgcgggttt gctgagccgc
     1261 gtcgtgaaaa cgctggacct ggaacacaac cgcgagtttt ttagctccgg ttcttccgat
     1321 tcatccatgt ggggcagcgt caaacggacg atcggcttcg gcgcgacgga caacccgcag
     1381 aataaggccc tcgcggaacg ggtggccgtg aattcgctcg cgccccaaac atcgcgtgac
     1441 gacatggcgg aaatgaaccg cctggcgcct tacgtcgaaa tgctgcaaag acgattgtcg
     1501 gtcaagccaa tcaccgaaac gcgcctgatt gagattcgct tcaagcacgc ggatccgcag
     1561 gtcgcttcaa aagtgctcaa cgccatcgcc gacgcattcg tctactcgaa ccttgaacga
     1621 aagactgaga ccagcgacaa ggccggcgac tttctgcaaa agcgtattgc cgagctgcaa
     1681 actgaaattc gcagcggcga agaacgcctg attaactatg cgaaggaaaa ccagattctt
     1741 tcactcgacg ccaatcagaa cacggtggtc gatcggctgt cgggtctgaa caagcaactg
     1801 ctcgaagcgg aaaacgagcg caaagttgcc gaggcgaatt accgcgcgag cctctcgccc
     1861 ggcgcggctg aagctttggc cgaaggccag gcgaaagaag ccgctgacgc ggggacgaaa
     1921 cttacggatc tgaaacagaa gcgcgctcaa ctgctggttg agtacaaaga gaagtatccc
     1981 gaagtgcagg aagtcgatca gcaaattgcg gtgctggaaa agcaaatcaa ggattcgcgg
     2041 aatcgcgcga caaccaccgt cacgaccaac ctggaaacgc gttatcgcca ggctgccggg
     2101 cgcgaacagt cgctgcgcgc ggctttcgat cgtcagcgcg gcgagatgct gagtcaaaac
     2161 gaggccgcgg tgaactaccg catcattcag caggaaatcg aaacgaacaa aggactgctg
     2221 gacggcctgc tgcaacgcgc gaaagagaac gacgtgatga tggccggcac gccgaacaac
     2281 attcacgttg tcgattacgc gccggtgccg aagagtccgg tcggtccaaa gcgggcgcag
     2341 agcatggcgc tcgcggcgtt ggtcgcgctc atcctcggga tcgccttggc ccgctatctc
     2401 gattatctcg acgacacgat tcattcctcg gatgacgtcg aaaagtctct gcgactgccc
     2461 gcgcttgccg tgattcccgc gatcagagct tccacgcggc tgcgactggc ttcgtcgatg
     2521 accggtctgc aattacaaaa gaacggcaac gtcctcagta acagcgcgag accagagctg
     2581 ctcctgaatg ctgactcgac ttcgccgctg gctgaggctt tccgtcacct gcgcacttcg
     2641 attcttctct cgaacgcggg tggcgcgccg caaactctgt tggttacatc cagccaacct
     2701 tccgaaggca agacgaccac ggccgtcaac accgcgctaa tccttaaaca aaccggcgct
     2761 aaggttttgg taatcgacgc tgacatgcgc aggccgcgcc tgcactcggt gttcgatatg
     2821 gagaacaaac gtgggctgag cacgattctc gcaagcaaga tgaacgaaga ag
//
LOCUS       DATDBY010000281         2723 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_852603, whole genome shotgun sequence.
ACCESSION   DATDBY010000281 DATDBY010000000
VERSION     DATDBY010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_852603"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..602)
                     /locus_tag="VIT19_05230"
     CDS             complement(<1..602)
                     /locus_tag="VIT19_05230"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEY5838419.1"
                     /translation="MRAQTATQDSINSKLLLKTLVAFKKGDFSARLPGDWTGEAGKIA
                     DTLNDIIDLSDKMAKELERVSRVVGKEGKIVHRAAVPAAGGSWLRLVDSTNLLIDDMA
                     RPTSEMARVIGAVANGDLSERMNLEVDGRPLKGEFLRTTRVVNSMVAQLGSFASEVTR
                     VAREVGTEGKLGGEAKVKGVAGTWKDLTDSVNSMAGNLTA"
     gene            complement(946..>2723)
                     /locus_tag="VIT19_05235"
     CDS             complement(946..>2723)
                     /locus_tag="VIT19_05235"
                     /inference="COORDINATES: protein motif:HMM:TIGR00757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEY5838420.1"
                     /translation="DESSRGAAFQRVSDDEDASANAESTAEPPSPPSSTRSRRKTGVI
                     SRFFKSKKAEEASDEAGTGSEDAASEDINADADASLTTGRAHEEFATRRGGRRRRKPK
                     GAGSAETEETNGQETEGEVVEADEAQPEEEPQPVAAAEPESESESDTNGTEETGPAAR
                     SSRRTPPAPRGGPRRRNPRHERKQVAISDLLKEGQEILVQIAKEPIAKKGARITSHIA
                     LPGRFCVYMPTVEHLGVSRKIDSDSERARLRKLIQKIHAEEDVPSGGFIVRTAGVGAK
                     EDELRADARYLIRTWMDMRQKAEKSKAPALVHRDLDLVQRILRDQLSEDFSAIRIDNE
                     EEYERVVEFVNRVQPKLVKRVKLYTRDEPILEHFGVQAEIDKAIKPRVWLKSGGYLVI
                     NQTEALVSIDVNTGKFVGRGATRLEDTITRTNMEAVEEIARQLRLRDLGGIIVLDLID
                     MEERRNRTRVMAALQDALRWDKSPTKVLSFNDFGLVIMTRKRVKQSLERTLCSPCSYC
                     QGAGLVKSPQTICYEILEQARRLSREGGSDGSRQAMLRVNPEVARTLRGPERDVLNEI
                     EDYLGSVDVTSDPRVHQEQFDFAFA"
BASE COUNT          475 a          845 c          783 g          620 t
ORIGIN      
        1 tgcgccgtga ggttgcccgc catcgagttc acactgtcgg ttagatcctt ccacgtgcct
       61 gctacaccct tcacctttgc ttcgccgcca agttttcctt ccgttcctac ttcgcgcgcc
      121 acgcgtgtga cctcggaagc aaacgaacca agctgggcca ccatcgagtt aacgactctc
      181 gtagtccgca ggaactcgcc tttcagcggt cgcccgtcga cttccaggtt catgcgttcc
      241 gacaggtcgc cgtttgccac tgcgccgatg acgcgggcca tctcgctggt gggccgggcc
      301 atgtcgtcaa tcaacagatt cgtggaatcg accagcctca accacgatcc gcccgccgcc
      361 ggcaccgcgg cgcgatgcac gatctttcct tccttgccga ctacgcggct gacgcgttcc
      421 agctctttcg ccatcttgtc gctcaggtcg atgatgtcgt tcagcgtgtc cgcaattttc
      481 cccgcctcgc cagtccagtc accgggcagg cgcgccgaaa agtcaccctt cttaaaagcg
      541 acgagggtct tcagcagcag ttttgaatta atagagtctt gggtagcagt ttgagctcgc
      601 atattttcct tcagagtctt gggaagtcgt tggagagact gcgccggaac agacttttga
      661 gaaaggagaa cccatttacg caactcgcag tcgggcgcac agatgcgtca aaagcagagg
      721 gggttctgcg ggggaactgt caaaacgccg gtggagctat ctgcgtttcg aacattttag
      781 ctaggcaggt tggactctgt aaagcattaa ttggcccgaa gccgggctgg gcggggagag
      841 cccgaccgta agggagggct cacggctatg gtgctgatga gccctggctg acgcgcgggc
      901 tacttacccg tgcttgtaag ggaaggatgc cccccggctc ccggcttatg caaaggcaaa
      961 atcgaactgt tcctgatgca cgcgcggatc gctggtgaca tcgaccgagc cgagataatc
     1021 ctcgatttcg ttcagcacgt cgcgctcggg gccgcgcagg gtgcgcgcga cttccgggtt
     1081 cacgcgcagc atggcctggc gcgaaccgtc gctcccacct tcgcgcgaca gtcgccgcgc
     1141 ctgttcgaga atctcgtagc agatcgtctg cggcgatttc accaggccgg cgccctgaca
     1201 atacgaacac ggcgagcaca aggtgcgctc gagcgattgc ttgacgcgtt tgcgcgtcat
     1261 gatcaccagg ccgaaatcgt tgaacgaaag aactttcgtt ggcgatttgt cccagcgcaa
     1321 agcgtcctgc aaagccgcca ttacccgcgt ccgattgcga cgctcttcca tatcaatcag
     1381 atcgagcacg atgatgccac ccagatcgcg caaacgaagc tgacgcgcaa tctcttcgac
     1441 cgcttccata ttcgtgcgcg tgatcgtgtc ttccaaacgc gttgcgccgc ggccgacaaa
     1501 cttgccggtg tttacgtcaa tcgaaaccaa agcttcggtc tgattaatta cgaggtagcc
     1561 gccggacttg agccagacgc gcggcttgat cgctttgtcg atttcagcct gcacgccgaa
     1621 atgctcgaga atcggttcat cgcgcgtgta aagcttgacc cgcttgacca gcttcggctg
     1681 cacgcggttc acaaattcga caacgcgctc gtattcctct tcgttgtcga tgcgaatcgc
     1741 gctgaaatct tcggacagct gatcgcgcag gatgcgttgc accaaatcga gatcgcgatg
     1801 gaccagtgcc ggcgccttcg acttctcggc tttctgccgc atgtccatcc acgtccgaat
     1861 caggtaacgc gcgtccgcgc gcaactcgtc ctctttcgcg cccaccccgg cggtgcggac
     1921 gatgaaccct cctgacggca catcttcttc ggcgtgaatt ttctggatta gctttcgcag
     1981 gcgggcacgc tcactgtcgg aatcgatctt gcgcgagaca ccgaggtgct cgaccgtcgg
     2041 catgtaaacg caaaagcgtc ccggcaatgc gatgtgcgat gtgatgcgcg cgcccttctt
     2101 ggcgatcggc tctttcgcaa tctggacgag gatttcctgg ccttccttaa gcaggtcgct
     2161 gatggcgact tgtttacgtt cgtgtcgcgg atttcgacgg cgggggccgc cgcgcggcgc
     2221 cggtggggtg cggcgactcg atcgcgccgc cggaccggtt tcttcagtcc cgttggtatc
     2281 agattcagat tcagattcgg gttccgctgc ggcaacaggt tgcggctctt cctcaggctg
     2341 ggcttcgtcg gcttcgacaa cttcgccctc agtttcctgg ccgttcgtct cctcggtttc
     2401 cgcgcttcca gccccctttg gctttcggcg tcgccttccg ccgcggcggg tcgcaaactc
     2461 ttcgtgcgcg cgcccggtcg tgaggctggc gtcggcgtcg gcgtttatgt cttcgctcgc
     2521 cgcatcctca gagccagttc ccgcttcgtc tgatgcttct tcagcctttt ttgatttgaa
     2581 gaaccggctg ataacgcccg tttttcgccg cgaacgcgtg ctcgatgggg gcgatggagg
     2641 ctcagcggtt gattcggcgt tggctgaggc atcttcgtca tcgctgactc gttgaaaggc
     2701 cgcgccgcgc gaactttcgt caa
//
LOCUS       DATDBY010000282         2723 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2052778, whole genome shotgun sequence.
ACCESSION   DATDBY010000282 DATDBY010000000
VERSION     DATDBY010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2052778"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..989)
                     /locus_tag="VIT19_05240"
     CDS             complement(<1..989)
                     /locus_tag="VIT19_05240"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEY5838421.1"
                     /translation="MVEALQKRKLRDFDWLVAALAILIVAFGIWQIHNAVPGETYWQK
                     QIVGLVIALVAMVAIAFSDYRRLVELAPILYLLGLVLLILVLIPGIGVKVNGQQCWIQ
                     LPGPLGRFQPSEFVKIPVVLMLAKVFGKHRTGALGWKEFAKGCLILAIPIGLILLEPD
                     TGQALTYLPLLATVLFLSSIKMRIVAAVLAACIVGAPLAYVVGVKTGVLSGYKLERIN
                     VILDPESADRRGFGYHTYQSMVTVGAGGILGSRDPEFSQSSLKFLPEPQTDFIFAVTA
                     ETTGFVGCLLLLAAYAVLLTRLITDARRSRDRTGMLVIMAIVGGLIFQIALNVG"
     gene            complement(1060..>2723)
                     /gene="mrdA"
                     /locus_tag="VIT19_05245"
     CDS             complement(1060..>2723)
                     /gene="mrdA"
                     /locus_tag="VIT19_05245"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR03423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEY5838422.1"
                     /translation="PIYNILLSREDTKNIDRNSLIQPLAHGLNIDPQMLRERFDQVKT
                     QPAFESIVIKEAANRSDIAWVDAHQLELPALRVEETPQRRYPANGVLAHVLGYVQEIS
                     PEQLEDPRYKSKGYKPGDIIGQDGIESVYDEFLRGRDGYREVVVDSRGHIQSERSRVE
                     PQPGQDLIITIDGDLQAAAELELKNSPQGRGVIIALDPNNGEILALASAPTFDPNLFS
                     QRITTKEGRAEYAALVNHPDKPLLNRAVQGRYPPGSTWKPLMATAGLKQGDITIENSN
                     VLCAGGIQIGNKHTRCMGGNHGSPNVHIAIAKSCDGYFYRLGLKMKLEGMQQMVREFE
                     LDKRTGIDLPHEIVSITPSRELKAKLHPKTPEWTDIDTIHASFGQGQDVITPIALIRA
                     HASIGMKGKMFVPHLLKEIRPVGSVGERQERAGRFFDRPQAKDLGIPADQNAVVVQAM
                     WAVVNEGGTATGIKIPGFDIAGKTGTAQVVSLGKEGSEFRDHSWFVSYAPAFKPEIAC
                     VALIENAGLGSRFGAPSVRAVYDVYYNKKHAQPDAMKANIAMKVR"
BASE COUNT          578 a          797 c          745 g          603 t
ORIGIN      
        1 cccacgttga gggcaatctg aaatatcagg ccgccaacaa tggccatgat taccagcatg
       61 cccgtgcggt cacgcgaccg gcgggcatca gtaattaagc gggtcagcaa gactgcgtaa
      121 gccgcgagca aaagcagaca gcccacaaag ccggtggttt ccgccgtcac ggcaaaaata
      181 aaatcggtct gcggttcagg gagaaacttc aaactgcttt gtgaaaattc cgggtcgcgc
      241 gaaccgagga ttccgcccgc gcccaccgtc accatcgact ggtatgtgtg atagccgaag
      301 ccacgtctgt ccgcactctc agggtcgagg atcacgttga tgcgttcaag cttgtaaccg
      361 ctcaggactc ccgttttcac tcccacgacg taagctaatg gagcgcccac gatgcacgcc
      421 gccagaaccg ctgcgacgat gcgcatcttt atcgacgaaa ggaacagcac ggtcgccagc
      481 agcggcaggt aagttaaagc ctgtcccgtg tcaggttcca gtagtattaa gccaatcggt
      541 atcgcgagaa tgagacaccc cttcgcgaac tctttccaac ccaaagcgcc cgtgcggtgc
      601 ttcccgaata ccttcgcaag catcagcaca accggaatct ttacgaattc agacggttgg
      661 aatcttccga gcggtccggg caattgaatc cagcattgct ggccattcac ttttacgccg
      721 atgcccggaa tcagcacgag gatcaggaga accaatccga gcaggtagag tatcggcgcc
      781 agttccacca gtcttcggta atcgctgaaa gcaatcgcga ccatggcgac gagcgcgatt
      841 acaaggccga caatctgttt ctgccagtac gtttcccccg gcactgcgtt gtgaatctgc
      901 cagatgccga acgcgacgat gaggatcgcc agcgccgcga ccagccaatc gaaatctcga
      961 agtttgcgtt tttggagagc ctctaccatt gaacttcaat agggcgaatg cgtcgtatag
     1021 gatccatggg tcgtaaaggt cccatgagtc tcagcggagt taccgaactt tcatcgctat
     1081 gttggctttc atcgcgtcgg gctgcgcatg ctttttgttg taatagacgt cgtaaaccgc
     1141 gcgcacggat ggcgcgccga agcgcgaacc cagccccgcg ttctcgatca aagcgacgca
     1201 cgcgatttcc ggcttgaagg ccggagcata cgaaacgaac caagaatggt ctcggaattc
     1261 gctgccttct ttgccgaggc tgacgacctg ggccgtgccg gttttgccgg caatgtcgaa
     1321 tccgggaatc ttgattcccg tcgccgttcc gccctcattc acgacggccc acatcgcttg
     1381 aacgacgacc gcgttttgat cggcagggat tcccaggtct ttggcctgcg gccgatcaaa
     1441 aaatcgtccc gcgcgctcct ggcgctcgcc gaccgaaccc acgggacgaa tttctttcag
     1501 cagatgcggt acgaacatct tgcccttcat cccaatcgac gcgtgcgcgc ggatcaaagc
     1561 gatcggagtt atcacatcct gtccctgccc gaatgatgcg tgaatcgtgt cgatgtctgt
     1621 ccactctgga gtttttggat gcagttttgc tttcaactcg cgtgacggcg tgatgctgac
     1681 gatttcatgc ggcaagtcga tccccgtgcg tttgtccagc tcgaattcac gcaccatctg
     1741 ctgcatgcct tcgagcttca tcttcaaccc gagccgatag aaatagccgt cgcaggactt
     1801 ggcaatcgcg atatgcacgt tgggcgagcc gtgattgccg cccatgcatc gcgtgtgctt
     1861 gttgccgatt tggatgccgc cggcgcataa cacattcgaa ttctcgatcg tgatgtcacc
     1921 ctgtttcagt ccggcggtcg ccattagcgg cttccaggtt gaccccggag gatagcgacc
     1981 ctgcacggcg cgattgagca gcggtttgtc aggatgattc accagggctg cgtactcagc
     2041 gcggccttct ttagtcgtga tgcgttggga aaaaaggttc ggatcgaaag ttggcgccga
     2101 tgcgagcgcg aggatctctc cgttgttggg atccaaagcg ataatcacgc cacgaccctg
     2161 cggcgaattc ttgagttcca attcggcggc cgcctgtaga tccccatcga ttgtaatgat
     2221 cagatcctgg ccgggctgcg gctcgacccg cgatcgttcg ctttgaatgt gaccgcgact
     2281 gtccacgaca acttcgcggt aaccatcccg gccacgaagg aactcgtcat agaccgactc
     2341 gattccgtcc tgtccgataa tgtcacctgg tttgtaaccc ttgctcttgt atcgaggatc
     2401 ctcgagctgc tcaggactaa tctcctgaac atatccgagc acgtgggcga gcacgccgtt
     2461 cgccggatag cgccgttgcg gcgtttcctc aacccggagc gcgggaagct cgagctgatg
     2521 cgcatcgacc caggcgatgt cgctgcggtt cgccgcttct ttaatgacga tggactcaaa
     2581 cgccggttgt gtcttcacct gatcaaatcg ctcgcgcaac atttgcggat cgatattgag
     2641 cccatgcgcc agcggctgaa tcagcgaatt gcgatcgatg ttcttggtgt cttctcggga
     2701 aagcagaatg ttgtagatgg gtc
//
LOCUS       DATDBY010000283         8483 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2057491, whole genome shotgun sequence.
ACCESSION   DATDBY010000283 DATDBY010000000
VERSION     DATDBY010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8483
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2057491"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="VIT19_05250"
     CDS             complement(<1..318)
                     /locus_tag="VIT19_05250"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY5838423.1"
                     /translation="MEFTADRVDTMISETDALEHWHEASLRVRYAETDKMGVVYHANY
                     LVWFEIGRTEYCRARGFSYRDMEESENAFLVVAECYCRYKAPAYYDDVLIVRTHITEL
                     RRRS"
     gene            401..1747
                     /locus_tag="VIT19_05255"
     CDS             401..1747
                     /locus_tag="VIT19_05255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838424.1"
                     /translation="MSKPINIAVSLRKQAPLHLLVIFLCVCTVWSSELLPVSAQRPAG
                     RADTSTAAARNAALTAATEEVLKETSQVRELAVLRPVQSSAQSRAQIEQMILRNLDRN
                     TKPGEMHAAEVTLKKLGLAPADFQYRPLVVRLLTEQVAGYYDPKAQQFHLADWIDADA
                     QKPIMAHELVHALQDQHFNLRRFEQWPDGDSDAQLAAHALIEGDATLAMSQYIMKNPL
                     RALGFLKSMAETGMTSEELDKAPRALRETLLFPYQEGMTWARMVHQYGGWSNVSKAFR
                     DLPQSTEQILHPEKYFVHEAPVKVSLPDIRLSLGRGWRRIESDVNGEWSLYLILDQFL
                     KSSPDSKRAAAGWGGDRYAVYESQRGQVVYVSVSAWDTEKDAREFFDAYTRNIELRYQ
                     SPIRAGTTANWHRRRSWQANDGEIILQVSGVKVLVVEGIPRNVKARSVLSALSPAL"
     gene            complement(1751..2644)
                     /locus_tag="VIT19_05260"
     CDS             complement(1751..2644)
                     /locus_tag="VIT19_05260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5838425.1"
                     /translation="MSAILVADNDPHWLNVMCGLLAPAQHTLIRATSPSEALAALSEQ
                     RVDLAVLDLRLKDNANDYDISGFKVAKDSDHSIPKIIVSHFKSEREFADAYPAAFKMD
                     ENARPIIVDYVQKGELETKLLPSVQNALKIKVTWSSASQSKIAQLLHGDYETARWDAK
                     MHYLISSAISVIFALIFFWGAYRLHSANEHSATPLILLIIGVFVAEITNYLFGRKLEF
                     LHHRVERYHDELLQTERFGQLLAMADSISDEKAREVYKFELFMAATSEWIGKDKRSQR
                     SGTSTQPLDDENPTRILHKRN"
     gene            complement(2660..5986)
                     /locus_tag="VIT19_05265"
     CDS             complement(2660..5986)
                     /locus_tag="VIT19_05265"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEY5838426.1"
                     /translation="MSIPASPSPPIGNNSEETLTAVCKAAVKLVGVDHSGLVLFENNL
                     EFGTVCAEYPPARNSAVGRRVQIRGIPLEEQLAERKPFVVNDVRGEVALGTVRDLLLD
                     VGVGSILVVPIVVGDAVKGSFSFDSTSQPPRFFDDDDKQKCVSLAEFASLVIENADLL
                     NNVQALQRAMLAIAYEQERDALLKAIIEQAVILLQAEGGGIDELDERSRELTIVAQFE
                     MSEDIVGKKMKVGEGLAGRIIQENLDHKIVKDYATWEGRAPYFRTTDLEALIGVPLRL
                     HGKPTGVIWLNVPNDREYTESDIKLLKGLAGPASIALEQLSLRDAERRKAARLNLLAN
                     ATNEIFGNLAISNQTERLRLIGKHAHEIIDAELCGIFLVEKPGWLKLVAGHGYKEGHF
                     QQDLQLEIISAPDMGLTGHIAATGDVVRLCGDELLSHPTLRNKTGTADYIESGRCFSV
                     MGIPLKTKSGKLQGLLSIHNKRDQDGKPNEWTCFTNDDQAIGVIFAQAALVAIETADL
                     LDEIRRGQERYKTVLRASNLVVSTKVPDKGLRALAEMVMNVIRRSFCRILFYDPVGET
                     IQVVAAEKGRDNKGSFDWEQRLGEKTPVNYWPGLRQSLETGTTVVQKGGTPDSEFNLD
                     RLSELLKLRDEESKPLKLNYLLWNPLRVQERIIGLLIIGELDENSEFSQTEIDMVEHI
                     ARQASLALEKVQRDKEVLQNFFVTEREITASTNPSEALRKIAAQVYQVGRAYGRKVTI
                     ADVNLREGDQLRVVAAFPEEQLDQIRSVVGDSYVLNQRFGEKQRLGIVGRVFRDGESI
                     RESAVQFNLDYVEIHPDTLSQLAVPIRDGIETIGVISVESSEPSAFDEYDQMLVETIA
                     RLAWSVISRERDLREKQDLLREKQKLQTMATAGAASQFWSHELKHASQLIVNQADKAG
                     SMLASPEIKSILARIRTQAHYIQELHFTPLSSEGVFTENLNPFLEEYLGEFKYDSEQK
                     DLGLTVEWMLDQTQGRDVRINQSWFQKALSFFLDNAREAASAAEEKRIEIRTESLDDS
                     RCRIHIRNTGKKILEHVWDKMGVEKIPKGTGTSKGTGIMQADLILSVYGGKFEKISNE
                     ENNIVVAVNLPLVPLASVER"
     gene            6250..8055
                     /locus_tag="VIT19_05270"
     CDS             6250..8055
                     /locus_tag="VIT19_05270"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HEY5838427.1"
                     /translation="MADIESEVVSTSGFKVRPLTKQKAVGSGPQAKTLTTEGSNTTAE
                     HQPKQSRLRELTNELRGLEANIRLGGGPERIEKQHRQGKLTARERIDLLLDKDSFRQE
                     IGLLIAYDQYRAEVRGQASEVSKNSEEVGGAPAAGVVTTVGRVAGREVVVVANDATVK
                     AGSWWPETIKKILRAQEIAMRSRIPIIYLVDSAGVNLPYQGGVFPGQYGASRIFYYNS
                     IMRRYLKVPQISAVMGPCIAGGAYLPALSDVIIMVEGTSFMGLGGANLVKGATGQTID
                     NETLGGARTHNELSGVAHYRVKNDDAAIAKIREFVSELPNQKSEVRSQKSENESATLP
                     AEKIYEILPEDHRQPYDMRGLLKCLLDGGHLDEFQADYAKEVITGNASIQGIKVGVIA
                     NARGMFRDPSGGAPRFGGIIYTESAEKVAYFIDTCNRHETPLLFVQDVSGFMVGSEAE
                     HSGIIRAGARFVEAMATATVPKIVLTVNHASGAGYYAMAGQGFDPNFIFSWPTGRMGV
                     MEGESAVQAVFGSELERLKKSGQEPGPELELEMRKVRETYERDLDAKYAAARGFVDAV
                     LVPEETRAALELALQVSLNYAGPHLGQFVLPASLA"
     gene            8082..>8483
                     /locus_tag="VIT19_05275"
     CDS             8082..>8483
                     /locus_tag="VIT19_05275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838428.1"
                     /translation="MRKTTYPFLLAVIVAVFGALVSAGFVVSAQNTNSSTTMTNSNTN
                     TSRPRRPRRPRPKASPTPEATSDTTAMADTTAATPPRTGRCDPNKQEPADLSGTYTGR
                     MQHGDDVRDATLTISGNSFTMTSGADSHTGRI"
BASE COUNT         1874 a         2287 c         2330 g         1992 t
ORIGIN      
        1 cgaacgccgg cgtagttcag tgatgtgagt tcgaacgatc aggacgtcgt cgtaataggc
       61 gggagctttg taacggcagt agcattcggc cactaccagg aaggcgttct cgctctcttc
      121 catatcgcga taggaaaaac cgcgcgcgcg acaatactca gtgcgaccaa tctcaaacca
      181 gacaagatag ttcgcgtgat acacgactcc catcttgtcc gtttcggcgt atcggacgcg
      241 caaagaggct tcgtgccagt gctctaacgc gtccgtttcg gaaatcatcg tatccacgcg
      301 gtcggcggtg aattccatcc gccggagcag atggtctaca ctctaaaaaa gtgttctctg
      361 attaatgtcg tttagcggac tataaaagcg aaacatgact atgtcaaagc caatcaatat
      421 cgccgtcagc cttcgaaaac aagcacctct tcacctgtta gttatttttc tctgtgtttg
      481 cacggtctgg agttcggagc ttctgccggt atcggcgcag cggccggccg gccgtgccga
      541 taccagcact gcggctgccc gaaacgcggc gttgacggcg gccaccgaag aggtattgaa
      601 agaaaccagc caggttcgag agctcgccgt tctgcggccg gtgcagagtt cggcacagtc
      661 ccgcgcgcaa atcgaacaga tgatcctgcg caacctggat cgcaacacga agcccggaga
      721 gatgcacgcc gccgaagtga ctctgaagaa actcggactg gcgcccgcgg attttcagta
      781 caggccgctg gtcgttcgtc tgctgacgga gcaggtggcc ggctactacg atccaaaggc
      841 gcagcagttt catctcgcgg attggatcga cgctgatgcg cagaaaccga tcatggccca
      901 cgagctggtt cacgcgcttc aggatcagca cttcaatttg cggcggttcg aacagtggcc
      961 ggacggcgac tcagatgcgc aactcgccgc ccacgcgcta atcgaaggcg acgccacgct
     1021 cgcaatgtcg caatacatca tgaagaaccc cttgcgcgcg ctggggtttc tgaagtcaat
     1081 ggccgagacc ggtatgacca gcgaagagct ggacaaagcg ccgcgcgcgt tgcgcgagac
     1141 tttgctgttt ccgtatcagg agggcatgac gtgggcgcgc atggttcatc agtacggcgg
     1201 ttggagcaac gtgtccaagg cgtttaggga tctgccgcaa tcaactgagc agatactgca
     1261 tccggagaag tactttgttc acgaggcgcc ggtgaaagtt tcgctgcccg acatccgttt
     1321 gtcgctcggc cgcggctggc ggcgcattga atcggacgtg aatggcgaat ggagtcttta
     1381 tctaattctg gatcagttcc tgaaatcttc tcctgactcg aagcgtgcgg cggcaggctg
     1441 gggcggcgat cgatacgcgg tttatgaaag tcagcgcggt caggttgttt acgtttccgt
     1501 ctcagcgtgg gacacagaaa aagatgcgcg cgaattcttc gatgcgtaca caagaaacat
     1561 tgagttgcga tatcagagtc caatccgggc gggaacgacc gcaaactggc atcgccggcg
     1621 cagctggcag gcgaatgacg gcgaaatcat tcttcaggtt tccggagtta aggtcctggt
     1681 ggttgaagga attccccgga acgtcaaagc gcgatcagtg ctctcggcat tatcgcccgc
     1741 tctctaacct tcagtttctc ttatgaagaa tgcgagtggg attttcgtcg tctaggggtt
     1801 gggttgaagt accactgcgc tgtgagcgct tgtctttccc gatccattca ctggtggcgg
     1861 ccataaaaag ctcgaatttg taaacctctc gagctttttc gtcgctaatg ctgtcggcca
     1921 tggccaagag ctgcccgaat cgctcggtct ggagtaactc gtcgtgatac cgctcgactc
     1981 gatgatgaag aaattccagc ttgcgcccga acaggtagtt ggttatctcg gccacgaata
     2041 caccgatgat tagcaggatc agaggcgtcg cactgtgctc gttcgcgctg tgaagccgat
     2101 aagctcccca aaagaagatg agcgcgaaaa tgactgaaat agcggacgag atgagatagt
     2161 gcattttggc atcccatctc gccgtctcgt agtctccatg aagcaattgc gcgatcttgg
     2221 attgtgaggc tgaggaccac gtgactttga tcttgagggc gttttgtacc gatggcaata
     2281 acttggtttc gagctcaccc ttttgaacgt agtcaacgat gatcggccgg gcattctcat
     2341 ccatcttgaa agcggccggg taggcatcgg caaattcgcg ctcactctta aaatggctga
     2401 ctattatttt cggaatcgag tggtctgaat ctttggcgac tttgaagccc gagatatcgt
     2461 agtcattcgc attgtcctta agtcgcagat ccaaaacggc gaggtcgacc cgctgttcgc
     2521 taagcgccgc taacgcttca ctgggactcg tcgcccgaat gagcgtatgc tgcgccggcg
     2581 ccagcaggcc acacatgacg ttcagccaat gcggatcatt gtcagcaacg agaatggcac
     2641 tcattgtttc aactcgtctc tagcgttcta cggatgccag cggcacgagc ggtagattta
     2701 ccgcgacgac aatattgttt tcctcattgg aaatcttctc gaattttccg ccgtacacgc
     2761 taaggataag gtccgcttgc ataattcccg tacccttaga agttccagtg cctttcggaa
     2821 ttttctctac acccattttg tcccagacat gctcgaggat cttcttgccg gtatttcgga
     2881 tatggatccg acatctcgaa tcgtccaatg actctgttcg tatctcgatt cgtttttcct
     2941 cggctgcgct tgcggcctct cgcgcgttgt ccaggaagaa cgaaagcgct ttttgaaacc
     3001 aggactgatt aattcggacg tctcgaccct gcgtttggtc cagcatccat tcaacggtca
     3061 aacctaggtc tttttgctcg gagtcgtatt tgaactcacc gaggtattct tctaaaaacg
     3121 gattcagatt ctcggtgaac acgccctcgc tcgacagcgg agtaaaatgg agttcctgga
     3181 tatagtgcgc ctgcgttcga atccgagcca ggatactctt gatttcgggt gacgcgagca
     3241 ttgatccggc tttatctgct tggtttacga ttagttgaga tgcgtgtttc agttcgtgac
     3301 tccagaattg tgatgcggcc ccggccgtcg ccatcgtttg caatttttgt ttttcacgca
     3361 gtagatcctg cttctcgcgt aaatctcttt ctcgcgaaat gacggaccac gctagtctgg
     3421 cgattgtttc gacaagcatc tgatcgtatt catcaaacgc gcttggttca gaactctcaa
     3481 cgctgataac accgattgtt tctattccat ccctaatggg caccgccaat tgagacaacg
     3541 tgtccggatg aatctccacg tagtcaaggt tgaattgcac agccgattca cgaatacttt
     3601 cgccgtcacg aaagacgcgt ccaacgattc ccagacgctg tttctcgcca aaccgttgat
     3661 tgagaacata agaatcccct acgacactgc gaatctgatc gagctgctct tcagggaaag
     3721 cagcaacgac acgcagttgg tctccttcac gtaggttaac gtcggcgatg gttacctttc
     3781 ggccataagc tcgaccaact tggtagactt gggccgcaat ctttcgcaat gcctcgcttg
     3841 ggtttgtgga agcggtgatc tcacgctcag tgacaaaaaa gttctggaga acctctttat
     3901 cgcgttgcac cttctcaagc gccaacgaag cctgtctggc gatatgttcc accatgtcga
     3961 tttcagtctg gctgaactct gagttctcat cgagttcccc gatgatgaga agtccgatta
     4021 ttcgttcctg cacccgcaga ggattccaaa gaagatagtt tagcttgagg ggcttgctct
     4081 cttcgtctct cagcttcagc agctccgaaa ggcgatccag gttgaactcg gaatcgggag
     4141 tgccgccctt ctgaacgact gttgttcccg tctcgagcga ttggcgaagt cccggccaat
     4201 aattgactgg tgtcttttcg cccagacgct gttcccaatc aaaactaccc ttgttatctc
     4261 ggcccttctc ggccgcgacg acctgaatag tttcacctac cggatcataa aaaaggattc
     4321 ggcaaaaaga tctgcgaatg acgttcatga ccatctcggc caaggctcgc agccctttgt
     4381 ccggtacctt tgtcgaaaca acgagattgg acgcccgcag aacggtcttg tagcgttctt
     4441 gaccgcgccg aatttcatcc aggaggtcgg ctgtttcgat tgcgacaagt gcagcttgcg
     4501 caaaaatcac accaatggcc tggtcgtcgt ttgtaaagca ggtccattcg tttggttttc
     4561 cgtcctggtc tctcttgtta tggatgctta acaatccttg caatttaccg ctctttgtct
     4621 tcagcggaat tcccatcacc gaaaagcacc tgccggattc gatgtagtcc gccgtgcccg
     4681 tcttgtttct taatgtagga tggctcaaca gttcatcgcc gcagagcctg acgacgtctc
     4741 ccgttgctgc gatgtggccg gtcagaccca tgtctggggc cgagataatc tctaactgca
     4801 gatcttgctg gaagtgacct tccttgtaac cgtgtcccgc gacaagttta agccagcccg
     4861 gtttttcgac tagaaaaatt ccgcataatt ccgcatcaat aatctcgtga gcatgtttgc
     4921 cgatcagccg taatcgttcc gtctgattgc taatcgcgag attgccgaag atttcgttag
     4981 tcgcgtttgc cagtagattc aaccgcgccg ctttccgacg ctcagcatcg cgaaggctca
     5041 attgctccag cgcgatactc gcagggccag ccagcccctt cagcagcttg atgtcacttt
     5101 cggtgtactc tcgatcgttg gggacgttga gccagatcac accggtcggt ttgccgtgca
     5161 aacgcagggg cactccaatt agagcttcta agtcggtagt tcgaaaatag ggtgcgcggc
     5221 cttcccatgt cgcgtagtct ttaacgatct tgtgatccag gttctcttgg atgatgcggc
     5281 ccgccaagcc ctccccaact ttcattttct ttcctacaat gtcttcagac atctcgaact
     5341 gggccacgat cgttagctcc cggctccgtt cgtccaactc gtctatgccg ccgccctcgg
     5401 cctgaagcaa aatgacggct tgctcaataa ttgccttcaa gagcgcgtct cgctcctgtt
     5461 cgtacgcaat cgccaacatt gctctttgca atgcttggac gttgttcaga aggtcagcgt
     5521 tttcgattac gagcgacgca aattcggcga ggctcacgca tttctgcttg tcgtcatcgt
     5581 cgaagaaccg cggtggttga cttgttgaat caaaactaaa tgaacccttc accgcatcgc
     5641 caacaacgat tgggacgacc aggatcgaac caactccgac atccaacaat aagtcgcgaa
     5701 cagtaccaag tgctacttcg ccccgtacgt cgttaacaac gaacggcttg cgttcggcta
     5761 attgttcttc caaggggatg ccgcgaattt ggactcggcg gccaacggcg gaatttcgtg
     5821 ctggcggata ctccgcgcag acggtgccaa attcgaggtt gttctcaaac agtactaagc
     5881 cgctgtggtc gacgccgacg agctttacag ccgccttgca gaccgcagtt agcgtctctt
     5941 cggagttgtt tccgattgga ggagatgggg aagcggggat cgacatgtga gttcagcgcg
     6001 tcggggtccg ccagggcaat aggcttctgg ccctgaacat aatgagaact caaaagatag
     6061 tcaagttcgc aacagacttg cgagccgtcc tctacagcgg cttgcggtgt ccatgcgcgc
     6121 gggtctgcgc aaacacataa tggattcatc tttagcctgt caggagtcgt tggcggagtg
     6181 cttacctatt ggcgtttatc tctttcgctg tggtattttt cgaaagcaat agcttcctag
     6241 agacgcaaaa tggctgacat tgaatctgaa gttgtgtcca cttcggggtt taaagtgcgc
     6301 ccgcttacga agcagaaggc cgtaggcagc gggccgcagg ctaaaactct caccactgaa
     6361 ggctccaata caaccgcgga gcatcaacca aaacaatcca ggctgcgcga actcacgaat
     6421 gaattgcgtg ggttggaagc gaatattcgt ctcggcggag gacccgaaag gatcgaaaaa
     6481 cagcatcggc agggcaagct aacggcgcgt gagcggatcg atctgttgct cgacaaggat
     6541 tcgttccgtc aggagatcgg tttgctcatt gcgtacgatc agtacagagc agaggtcaga
     6601 ggtcaggcat cagaggtcag caagaactct gaggaggtcg gcggtgcccc ggctgccggg
     6661 gtcgtgacga cggttggtcg cgtcgcgggc agggaagtcg tcgtcgtcgc gaatgacgcc
     6721 accgtgaagg ctggttcatg gtggcctgaa accatcaaga agattctgcg tgcgcaggag
     6781 attgcgatgc gctcgcgcat tccgatcatc tatctggtgg actcagccgg cgtcaatctc
     6841 ccctatcagg gcggtgtatt ccccgggcag tacggggcgt cgcgaatttt ctattacaac
     6901 tcgatcatgc gtcggtacct gaaggtgccg cagatttctg ccgtcatggg tccgtgcatc
     6961 gccggtggcg cttatctgcc cgccctctcc gacgtgatca ttatggtcga agggacttcg
     7021 tttatgggtc tcgggggcgc caaccttgtg aaaggcgcga ccgggcaaac gatcgacaac
     7081 gaaacgctcg gaggtgcgcg cacacacaac gaattgtcgg gtgtcgcgca ctatcgcgtt
     7141 aagaatgacg acgcagcgat cgcgaagatt cgagagtttg tgtccgagct tccgaaccag
     7201 aagtcagaag tcaggagtca gaagtcagaa aatgaaagcg cgacgctgcc agctgagaaa
     7261 atctacgaga ttcttcccga agatcaccgg caaccgtacg acatgcgcgg gctgctcaaa
     7321 tgtctgttgg acggcggaca cctggacgag tttcaggctg attatgcgaa agaggtgatc
     7381 accggtaacg ccagcattca aggaattaag gttggcgtca tcgcgaatgc gcgcggaatg
     7441 tttcgcgatc cgtccggtgg tgcgccgcga ttcggcggca tcatctatac cgaatcggct
     7501 gagaaggtcg cgtactttat cgacacgtgc aatcgccacg agacgcctct gctgtttgtt
     7561 caggacgtct cgggtttcat ggtcggctcg gaagccgaac actccggaat cattcgcgcg
     7621 ggcgcacgct tcgtcgaagc aatggcgaca gcgaccgttc ccaagattgt gctgacggtg
     7681 aatcacgctt ccggcgccgg ttattacgcc atggccggtc agggtttcga tccgaatttc
     7741 atttttagtt ggcccacggg acggatgggc gtgatggaag gcgagtcggc tgttcaggcc
     7801 gtcttcggca gtgaacttga gcggttaaag aagagcggac aggagccggg tccggaactc
     7861 gagcttgaga tgcgcaaagt gcgcgagacg tacgaacgcg atctcgacgc aaagtacgct
     7921 gcggcgcgcg ggtttgtcga tgccgtcctc gtgccggaag agacgagagc cgcgctcgaa
     7981 cttgcgctgc aggtgagcct gaattatgca gggccgcatc tcggccaatt tgtcttgccg
     8041 gcatcattag cctaggggac tgaaaagtaa ggagaacgat cgtgagaaaa accacctatc
     8101 cttttcttct ggcggtcatc gttgcggttt ttggagcgct ggtgagtgcc ggattcgtcg
     8161 tgtcggcgca gaataccaac tcgtcgacga cgatgacgaa ctcaaacacg aacacgtcaa
     8221 gaccgcgccg acctcggcga ccgaggccaa aggcgtcgcc tacgcctgag gcgacatccg
     8281 acacgaccgc gatggctgac actactgcgg cgacaccgcc gcgcacgggc cgttgtgatc
     8341 cgaataagca ggagccggcg gacctttcgg gaacctacac cggcagaatg caacacggag
     8401 acgacgtccg cgatgcgacg ctaacaatta gcggcaacag ttttacgatg acgtccggag
     8461 cagactcgca caccggacga att
//
LOCUS       DATDBY010000284         2690 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2067307, whole genome shotgun sequence.
ACCESSION   DATDBY010000284 DATDBY010000000
VERSION     DATDBY010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2690
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2067307"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..567)
                     /locus_tag="VIT19_05280"
     CDS             complement(<1..567)
                     /locus_tag="VIT19_05280"
                     /inference="COORDINATES: protein motif:HMM:NF024827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiheme c-type cytochrome"
                     /protein_id="HEY5838429.1"
                     /translation="MRLTKSINLLLVLAALLVVAVWLVTARSSQATSQPATDDKPKPK
                     PIAAKTDAGYVGTDVCKDCHEDQFKAYSHTTHADLAKVSSWKDKVTGCESCHGPGQAH
                     VEGGGDVSKIVSFKNKTSKEISETCLNCHAGKDERNNFRRGEHWRNDIGCTDCHSSHS
                     NVTGRNVASSNQFVTTPNAEKPGFATIAM"
     gene            complement(792..1508)
                     /locus_tag="VIT19_05285"
     CDS             complement(792..1508)
                     /locus_tag="VIT19_05285"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY5838430.1"
                     /translation="MTSASRAVMGSAHSAGTPIRVLPCISPLRSIPGFDRVSRARIYA
                     KGAVVFREGNAALGVYMLSSGRAKISISSADGKKLILRIARGGDILGLYAGLTGRPFE
                     ATAEMVEGGRVDFISRQDLLNLIGRQNGPSLNLLEVFSRQFSELVEHTRITALSESAL
                     EKLARLLVRWCDEGGQPTAHGIRINLGLTHEELAQMICTSRETVTRLLADLRRKQVVS
                     LSDNAIFIRNRKALELAARG"
     gene            1843..2244
                     /locus_tag="VIT19_05290"
     CDS             1843..2244
                     /locus_tag="VIT19_05290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838431.1"
                     /translation="MAKDDRDILELLKEELAFIEQGGYGRSVRTPWLPKSAFQDSLTC
                     VNYGYPYRAHPCNECQLIDFVDEGHKGEPVPCHFIPLNEAGETIEDLEAQNNQPKLEA
                     TLKSWMRAKIREIEEARAKRPVSENGQHALA"
     gene            2377..>2690
                     /locus_tag="VIT19_05295"
     CDS             2377..>2690
                     /locus_tag="VIT19_05295"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838432.1"
                     /translation="MSNSITIDGNEAAAYVAYKTNEVIAIYPITPSSPMGESSDAWAA
                     VNEKNIWGMTPLVREMQSEGGAAGAVHGTLQTGSLTTTFTSSQGLLLMIPNMFKIAGE
                     QT"
BASE COUNT          610 a          747 c          750 g          583 t
ORIGIN      
        1 catcgcaatc gtcgcgaagc ccggcttttc cgcattaggc gtggtaacaa actgattcga
       61 gctggcaaca ttccgccccg ttacattcga atgtgacgag tgacagtcag tgcagccgat
      121 gtcattgcgc cagtgttcgc cacgacgaaa gttattacgc tcgtctttgc cggcgtggca
      181 gttcagacaa gtctcggaaa tttccttcga agttttgttt ttgaacgaaa cgatcttgct
      241 gacgtcaccg ccgccctcaa cgtgcgcctg gcccgggccg tggcaggatt cacagccggt
      301 taccttgtct ttccaactgc taaccttggc caggtcggcg tgcgtagtgt gcgagtacgc
      361 tttgaactgg tcttcgtgac agtccttaca gacgtcggtg ccgacataac cagcatcggt
      421 cttcgcggcg ataggtttgg gctttggttt gtcgtctgtg gccggttgac tggtcgcttg
      481 cgaacttctc gcggtcacca gccaaactgc gacgactaag agcgccgcca gcacgagcag
      541 caagttgatc gattttgtga gtctcacttt ggagcctcct cctgtgaaag gccgactgga
      601 ttacgccggc tggaacagca tttttataag aactatggcg agccgtgaca tgttaacgag
      661 caaaacagca aatggctgtg accgttgtca caggagacag cacaagcagg cgacccgggc
      721 gatgcctgaa acttgtaaca gaggcggaaa aaccagtctg tgcggtatca cacataaact
      781 ccgagaaact tttaaccacg ggctgccaat tccaaagcct tccggttgcg aatgaaaatc
      841 gcgttatccg acaaactgac gacctgcttc cgcctgagat cagcaagcag gcgggtcacg
      901 gtctcgcgtg acgtgcaaat catctgagcc agctcttcgt gggtgagtcc caggtttatc
      961 ctaatgccgt gggctgtggg ctggccgccc tcgtcacacc atcgaactaa aagccgcgcc
     1021 agtttctcca aagccgactc agacaacgcg gtgatccgcg tgtgctcgac cagttcgctg
     1081 aactgccggc tgaacacctc cagcagattg agactcggac cgttctgtcg tccgatcagg
     1141 ttcaaaagat cttgtcgcga aatgaagtcc acgcgcccgc cttcgaccat ctctgccgtc
     1201 gcctcaaacg gacggcccgt caagccggcg tacagtccca ggatgtcgcc gccccgtgcg
     1261 atgcgcagga tcagcttctt accgtcagcc gacgatatcg aaattttcgc gcggcccgac
     1321 gacagcatat aaactcccag ggcggcgtta ccttcacgaa acaccacggc gcctttggcg
     1381 taaatgcggg cgcgactgac gcgatcaaat ccggggatgg agcgtagagg cgagatgcat
     1441 ggcaacactc ggatgggcgt tcctgccgaa tgagcgctgc ccattactgc tctgctcgcc
     1501 gaggtcatct tcgtaagttc tccattgaaa caccagacgt tgacgctgat cgcgccgcca
     1561 atcgtgagag agctctttag caacagacgt gccgactggt ttcactttta gttacagggg
     1621 ttttgagtgg tttgcgacgc tcaaggtgag agttttcgct catgctgtgc ggaacttttc
     1681 tcatgaaacc cgccgaggcc cggctttgtc gtcagaaatc ttttgttttc catcgggcat
     1741 atcagttgct gtcagacacc ggggataccc aaagctcgag cgaatggagc agcggcttgc
     1801 tgctcaggat gcagagccag ggagaactgg agggcagata ccatggccaa agatgatcga
     1861 gatattctgg aactgcttaa agaagaactg gctttcatcg agcaaggcgg ttacggccgc
     1921 tcggtccgca cgccatggtt accaaagtcg gccttccagg actccctgac ctgcgttaat
     1981 tacggttacc catatcgcgc gcacccgtgt aacgaatgtc aactgattga ttttgttgat
     2041 gaggggcaca agggcgaacc ggtcccgtgt catttcattc ctttgaatga ggcaggcgag
     2101 acaatcgaag atctcgaagc tcaaaacaat cagcccaagt tggaagcgac gctgaagagt
     2161 tggatgcgag cgaagatccg agagattgaa gaagcgcggg caaagcgacc cgtgagtgaa
     2221 aatggacaac acgctttggc gtgagatccg gtctggcgtt ccccctgacg gccgacgaag
     2281 ttcctcggcc ggcgctatcg gccgcaggta gtcttgaaaa gctgcctgcg gctgattggt
     2341 ttccaggctg gtttcgtcga agggtaagag aagctcatga gtaacagcat caccatcgat
     2401 ggcaacgaag cggccgccta tgttgcttat aagaccaacg aagtcatagc catctatccg
     2461 atcacgcctt cgtcgccgat gggtgaatcc tctgacgcct gggcggcggt gaacgagaag
     2521 aacatctggg gcatgacgcc gctggttcgc gagatgcaat ccgaaggcgg agcggccggc
     2581 gccgttcatg gcacactcca aaccggctca ctcacaacca cttttacctc cagccaggga
     2641 ttgctgttga tgatcccaaa catgttcaag atcgccggcg aacaaaccag
//
LOCUS       DATDBY010000285         2488 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_221344, whole genome shotgun sequence.
ACCESSION   DATDBY010000285 DATDBY010000000
VERSION     DATDBY010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221344"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..471
                     /locus_tag="VIT19_05300"
     CDS             <1..471
                     /locus_tag="VIT19_05300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838433.1"
                     /translation="RNPDGTLVSHHEFKNALQTSGAVLLGHLLQRTSKAGEWIVSVSG
                     GPSPCNTPCWIYEPATQFPVSDGVIIFKTLTISSQAGSNNNTVFAGTATASTDGVIDT
                     VSTSNYRCPVDSQGVCPASPFNGTSHHFTRTNLATPINVVAGQIIQVTVVISFS"
     gene            complement(850..1599)
                     /locus_tag="VIT19_05305"
     CDS             complement(850..1599)
                     /locus_tag="VIT19_05305"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY5838434.1"
                     /translation="MIPAMKLRLAQPSLLVDISRIKDLTYVREADGQICIGAMTTHYQ
                     IESSDLLKSICPLLPDCASHIGDMQVRNKGTIGGSVAHADPAGDWPAAIIALNAEMVA
                     TSKNGERTIKADDFFVDMLTTALEPGEILREIRIKKTNGRTGHAYVKMPHPASGFAVV
                     GVAANLSFNGGSECKSASIGITGVSAKAYRASAVEDNLIGAKLDLQTITSAASRATEG
                     VDINGDLFASDDYRRHLAQVYARRAISAAIR"
     gene            complement(1700..1933)
                     /locus_tag="VIT19_05310"
     CDS             complement(1700..1933)
                     /locus_tag="VIT19_05310"
                     /inference="COORDINATES: protein motif:HMM:NF017451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEY5838435.1"
                     /translation="MVNSFRDLRVWQAGMELAESIYQLTATFPTQEMYGLTSQLRRAA
                     VSVPSNIAEGHTRESTKEYQPLTANSQPQRRSS"
     gene            complement(1951..>2488)
                     /locus_tag="VIT19_05315"
     CDS             complement(1951..>2488)
                     /locus_tag="VIT19_05315"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY5838436.1"
                     /translation="LAAHIAKELPPDTEPGLSATYFFEPKNFTFPFGTHVCVVEIDKD
                     TGETKIIKYVAVDDCGKVINPLLVDGQVHGGIVQAIGQALYEEVVYDEQGQLLTGELM
                     DYALPRASQMPWLETDRTETPSPVNPLGVKGVGEAGTIGATPAVVNAVVDALSPYGVT
                     HVDMPIRPEKVWKIIAGR"
BASE COUNT          524 a          701 c          680 g          583 t
ORIGIN      
        1 cgcaacccgg acggcacgct ggttagtcat cacgaattta agaatgcgct tcaaacttcg
       61 ggtgctgtcc tcctggggca ccttttacag cgtacctcta aggcgggaga gtggatagta
      121 agtgttagcg gggggccgtc accgtgtaac accccgtgtt ggatctatga gccggcgacc
      181 caatttccgg tttccgacgg ggtgattatt tttaagaccc tgacaatttc gtcccaagca
      241 ggatcgaata acaacactgt gttcgcggga acggccacgg cgtcgacgga tggcgtcatc
      301 gatactgtgt ccacgagcaa ttaccgctgt cccgtggata gtcaaggtgt ttgtcccgcc
      361 agtcccttta acggaacgag ccaccacttc accagaacga acctcgctac gccaatcaac
      421 gtcgtggccg gacagatcat ccaggtcacg gtggtcatca gcttttcgta aaacgtaccg
      481 attgccaggc ggcggcggaa gaagaagagg aatagatttt cgctgagagc cccttagggg
      541 cagaatgttt atagtccgac caaaggggtt taagaattcg aagctccttt aggagcgaaa
      601 tgtgatggtt ttcgttacat catttcgctc ctaaaggagc tttggagtct tgggtggagt
      661 tcaggttgct ataaacatct cgctcctgac ggagcgaaga caaacggtcc gcaacgccag
      721 gaatgcacat gcggcattca ctcttgccgt gctgatccct cgccttcgac ccaaacttca
      781 ccatcttcga aaacctttcc aaatcggcac agtgcgtttg agtcgctaaa tacttccacc
      841 gcttagcagc tatcgaatgg ccgccgagat cgcgcgcctg gcgtaaacct gggccaaatg
      901 acgacgataa tcatccgagg cgaacaggtc gccgttaata tcgacaccct ctgttgctcg
      961 cgatgctgcg ctcgtaatcg tttgcaggtc cagtttggcg ccgatcaagt tatcttccac
     1021 agcggaagcg cgataggcct tcgccgaaac gccggtgatg ccgatgcttg cggacttaca
     1081 ttcgctgccg ccattgaacg atagattcgc cgcgacgccg acaaccgcga agcccgacgc
     1141 ggggtgaggc atcttcacgt aggcatgtcc cgtgcggccg ttggttttct tgatgcgaat
     1201 ctcgcgcaga atctcaccgg gttcgagcgc cgtcgtcaac atatcaacaa agaagtcgtc
     1261 cgctttgatg gtgcgttcac cgttcttgct ggtggcgacc atctctgcgt tgagcgcgat
     1321 gattgccgcc ggccaatcac ccgccgggtc agcgtgagcg acactgccgc caattgtgcc
     1381 tttgtttctc acttgcatgt cgccaatgtg tgaagcgcaa tccggcagca gcggacaaat
     1441 gctcttcagc aggtctgacg attcgatttg ataatgagta gtcattgcgc cgatgcaaat
     1501 ctggccgtct gcttcacgaa cgtaggtcag gtctttgatg cggctgatat ccaccaataa
     1561 ggagggctgc gccagtcgca gcttcatcgc cggaatcaaa ctgtgccccc ggcaagaacc
     1621 ttcgcctctt cattttgcga tagtagggac aacgcttcat cgagtgtgtt tgcacggacg
     1681 taatcgaacg gtgctggaat catgatgacc tccgttgggg ttgggagttg gcagttaggg
     1741 gttggtattc tttcgtcgac tctcgcgtgt gaccttccgc gatgttcgac ggtaccgaaa
     1801 cggcagcacg tcgtaattga ctcgttaagc cgtacatctc ctgtgttggg aatgtcgcgg
     1861 tgagctgata gatcgattcc gcgagctcca ttccggcctg ccagacacgc aaatctcgaa
     1921 agctgtttac caactcctaa cccccatctc ctatctccct gcaataatct tccaaacctt
     1981 ttccggcctg atcggcatat cgacatgggt tacgccgtac ggtgacaacg catcaaccac
     2041 ggcgttcacg actgccggag tcgccccgat ggttccggct tcgccgacac cttttacgcc
     2101 gagcggattc accggcgaag gcgtctcggt ccgatcagtt tcgagccagg gcatctgcga
     2161 agccctcggg agtgcgtagt ccatcaactc gccggtgagc agttggcctt gctcgtcgta
     2221 aaccacttct tcgtacagcg cctgcccaat tgcttgcacg atgccgccgt ggacctggcc
     2281 atcgacgagc agcggattga tcactttgcc gcagtcatcg acggcgacgt acttgatgat
     2341 tttggtctcg ccggtgtcct tgtcgatttc gacgacgcag acgtgcgtgc cgaatgggaa
     2401 ggtgaaattc ttcggttcaa aaaagtacgt tgccgacaag cccggttcag tgtccggcgg
     2461 aagctccttc gcgatgtgcg cggcgaga
//
LOCUS       DATDBY010000286         2401 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1844464, whole genome shotgun sequence.
ACCESSION   DATDBY010000286 DATDBY010000000
VERSION     DATDBY010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2401
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1844464"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            104..613
                     /locus_tag="VIT19_05320"
     CDS             104..613
                     /locus_tag="VIT19_05320"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY5838437.1"
                     /translation="MIIPVTIKAFLPRIIAFAGTLLVSFAVLNFLPSARVRRQTHFAR
                     AAADGDLQRMRMLQMAGVSVNSRAGCCSPLFLAAGEGRLSAVQYLLDQGADINARERG
                     GRTALTEAAFSGSNPVIKELILRGADVNTVSDAGTPLDVATQANHAPAIDLLKYYGAR
                     RGCELRGGC"
     gene            629..>2401
                     /locus_tag="VIT19_05325"
     CDS             629..>2401
                     /locus_tag="VIT19_05325"
                     /inference="COORDINATES: protein motif:HMM:NF019605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY5838438.1"
                     /translation="MTTNTLSPTEIFRDRSLFLIGGTGFLGKVTLSMLLHRFPNIGKV
                     FVTVRARSQEESETRFWNNVISAPPFNPLRERYGSATDGFIRDKVEIVGGDIAENNLG
                     FTEEEAERIAGNVDVILNSAGNVTFNPTLESALRTNVVGTQNVIAFTRRMKRPCLVHI
                     STCFVAGNRSGSIWEDDEVMGYFPRREELTGVEFSVQEEIRDCAKMAERAREEAKDAM
                     MAAYFREQARKRLNEEMRDADDPDALGLAVARERKVWVRTRLTEMGMQRAEFWGWPNI
                     YTYTKALGEQLVAAETEMVRSIVRPSIVESAKDYPFPGWNEGFTTTAPIVFLTFKGQR
                     QLPANKKLILDITPVDQVAAVMLAVSAQACVEQPKLVYQAATGDSNPNTMDRIIGLVG
                     LYRRQEELKKDTGLRLFREISARFEPFPVSPERFESASIPRMNKAAKKASELLNRARP
                     RWGGGRYEGVINRMQQTVDRVEEQTREAKEAFEMFLPFTVNNEYVFRADNVRALFNRI
                     SEDERQLLTWNPDKFDWYDYWLNQHLPGLKKWVLPTLEEDMRAQPKRIYTYRDLVELF
                     ETTTKRHATRVAMRIERDGRKEQYT"
BASE COUNT          536 a          691 c          724 g          450 t
ORIGIN      
        1 ctgaccgaag cgatcgcgat ggcgcgaaac tatatgggca actcagcgga aattacgatg
       61 ctgcatcaac cgatgattgg catcgccgac atggagtaag aaagtgataa ttccagtcac
      121 aataaaagcg tttcttccaa ggatcatcgc gtttgccggc acgctgctgg tgtcttttgc
      181 ggtcctgaac tttctgccca gcgcccgcgt gcggcggcag acccacttcg cgcgcgcggc
      241 cgccgacggc gacctgcagc gcatgcgcat gctgcaaatg gccggagtga gcgtgaactc
      301 gcgcgcgggt tgctgctcgc cgctgtttct cgcggccgga gaaggacggc taagtgccgt
      361 gcaatacctc cttgatcagg gcgccgacat aaacgcgcgc gaacgcggcg gacggacggc
      421 gcttactgaa gcggcatttt caggcagcaa tccagtaatc aaagaactga ttctgcgcgg
      481 cgcggacgtg aacacggttt cggacgccgg cacaccgctc gacgtcgcca cgcaagcgaa
      541 ccacgcgccg gcaatcgatt tgttgaagta ctacggcgcc aggcgcggct gcgaactgcg
      601 gggcggttgc taactgatcc aaaaagcgat gaccaccaat acactttcgc caaccgaaat
      661 cttcagagac cggagcctct ttctgatcgg cggcacgggc tttctcggca aagtgacgct
      721 cagcatgctg ctgcatcgct ttccgaatat cggcaaggtt ttcgtgacgg tgcgcgctcg
      781 ctcgcaggag gaatccgaaa cccgtttttg gaacaacgtt atcagcgcgc cgccgttcaa
      841 tccgctgcgc gagcgatacg ggtcggccac ggacggattc attcgcgaca aggtcgagat
      901 cgtcggcggc gatatcgctg aaaacaacct ggggttcacg gaagaggaag ccgaacgcat
      961 cgccgggaat gttgatgtca ttctcaactc ggccggcaac gtcacgttca atccaactct
     1021 ggaaagtgct ctgcgcacga acgtagtcgg cacgcagaac gtcatcgcgt ttaccaggcg
     1081 catgaagcgg ccgtgcctcg tgcacatctc aacctgtttc gtcgccggca atcgctcagg
     1141 gtcgatttgg gaagacgatg aagtgatggg ctatttcccg cgccgtgagg aactaaccgg
     1201 cgtcgagttt tcggtccagg aagagatccg cgactgcgcc aagatggccg aacgcgcgcg
     1261 ggaagaagcg aaggacgcga tgatggcggc gtactttcgc gagcaggcgc gcaagcgcct
     1321 caacgaagag atgcgcgacg ctgatgatcc cgacgcgctc ggtctggcgg tcgcgcgcga
     1381 gcgcaaggtt tgggtccgca ctcgcctcac cgaaatggga atgcagcgcg ctgagttctg
     1441 gggctggccg aacatttaca cttacacaaa ggcgctcggt gaacagctgg tggccgcgga
     1501 aaccgaaatg gttcgcagca tcgtgcggcc gagcatcgtc gaatccgcga aagactaccc
     1561 atttccaggt tggaacgagg gtttcacgac cactgcgccg atcgtctttc tcactttcaa
     1621 aggacaacgc cagcttccgg ctaacaagaa attgatcctc gacatcacgc cggttgatca
     1681 agttgccgcg gtgatgctcg cagtctcagc tcaagcctgc gtcgaacagc ctaagctcgt
     1741 ttatcaggct gcaacgggcg attcgaatcc caacaccatg gaccgaatca tcggcctggt
     1801 cggtttatac cggcgtcagg aagagttgaa gaaagacacc ggcttgcgcc tgtttcgtga
     1861 gatttcagcg cgtttcgagc cttttccggt ctcgcctgag cgttttgagt cggcctcgat
     1921 tccgcgcatg aacaaggcgg cgaagaaagc ctcggagctg ctcaatcgcg cgcgtccccg
     1981 ttggggcggc ggccgctatg aaggcgtgat caaccgaatg cagcagaccg tcgatcgcgt
     2041 cgaggagcag actcgcgaag cgaaagaagc attcgagatg ttccttccct tcaccgtcaa
     2101 taacgaatac gtcttcaggg ccgacaacgt gcgcgcctta ttcaatcgca tcagcgaaga
     2161 cgagcgccag ctgctgacgt ggaacccgga taagttcgac tggtacgact actggctgaa
     2221 ccagcatctg ccgggactga agaagtgggt gctgccgaca ctggaagaag atatgcgcgc
     2281 gcagccgaaa cgcatctaca catatcgcga tctggtcgag ctgtttgaaa cgacgacgaa
     2341 gcgtcacgcg acgcgcgtgg cgatgcggat tgagcgcgat gggcgcaaag aacaatacac
     2401 g
//
LOCUS       DATDBY010000287         3186 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1851087, whole genome shotgun sequence.
ACCESSION   DATDBY010000287 DATDBY010000000
VERSION     DATDBY010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3186
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1851087"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..945)
                     /locus_tag="VIT19_05330"
     CDS             complement(<1..945)
                     /locus_tag="VIT19_05330"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase"
                     /protein_id="HEY5838439.1"
                     /translation="MKRRDFMISSAVAGVALASERVVKANAPTMLIPAAVKPLVVASS
                     NGNRFKNGGDVTCVQKAYSMITKGEDVLDALVAGVNIVELDPLDDSVGYGGLPNADGV
                     VQLDSSVMHGPRKQAGAVACLEGVRTPSLVAKAVSEQTDHHLIVGKGAQDFARGMGFK
                     IEDDLNTANSRARWIEWKRRIDPLHYLDPKKRAEAGRRATEQMLAEGLLRAENLHGTI
                     NCDGINAKGEICGVTTTSGLAWKISGRVGDSPILGAGLYVDGSVGAAGSTGRGEANLY
                     NLCSYLIVEEMRRGAHPKDAGMTALKRIQANTIEKRLLN"
     gene            complement(1009..>3186)
                     /locus_tag="VIT19_05335"
     CDS             complement(1009..>3186)
                     /locus_tag="VIT19_05335"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5838440.1"
                     /translation="LLKQLAILFTAFCASAISATAQQPQNQNPDVIRVNTSLVQTDVM
                     VFDKQGKFVDELKREHFVLKVDGKPREISFFELIKAGSSNEEAQLAAARGVASNAGAP
                     VPLDRGRLVFFFIDDLHLSEGSMHHARKLLAQFVDREMGQNDQVALIAASGQIGFLQQ
                     LTDNKPALLKAVERLRPRPFKSRDYQSPPMSEFQALRIDARDRDVLDVFADQVLRENP
                     MLGRARAEEEVRARASTILRMAAVGTTSTLTSLQWVMEKFRSAPGRKVLFLLSDGFLL
                     DSRNSDSYARLRKVTASAASSAFVIYSIDARGLATGQPDASTPVIFDTSGRMTRGTMG
                     ELGASQDGLNALANDTGGRAFFNSNALSVALTRGLNEASVYYLVAWRPDPNEELNPKQ
                     RRLELSVIGRPDLTVRSRNSVGETPDAATKKPAAPPGENNRTAEVRKVLQAAIPKSGF
                     PVDVTLNFINSSLKGDVLITSVRLDPTSLHLEHKAGVPTGAILLAGLVLNDEGKVLDS
                     FDKRLTVRAKSAEDTVPRNITYTHYSTLKPGLYQVRIVAADEHGGPAGSVWDWIEISD
                     FSAKKLALSTLLVGERRAPTTNPSDPPEAKTDPLSDQVNLNVARRFASSSYLRFVTII
                     YNAASGPGSTSGNGNPPPAGSTPPAKPDLAAQIQVFRDDEPVITDPLHRISTDGETDL
                     ARIQYAAELKLEGLAPGRYVLQVTIIDRIAKASASQRLRFQVD"
BASE COUNT          643 a          955 c          896 g          692 t
ORIGIN      
        1 gttcagcaga cgcttctcga tcgtatttgc ctggattcgc ttcaacgccg tcatgccggc
       61 atctttcggg tgcgcgccgc gccgcatttc ttcgacaatc aggtatgagc acaagttgta
      121 aagattcgct tcgccgcgcc cagtcgatcc ggccgcgccc acactgccgt caacatacaa
      181 gccggcgccg agaatgggcg agtcaccgac gcggccggaa atcttccacg ccagaccgct
      241 ggtcgtcgtg acgccgcata tctcgccctt cgcgttgatg ccgtcgcagt tgatcgtgcc
      301 gtgcaggttc tctgcgcgca aaagtccttc agctaacatc tgttcagtcg cgcggcgtcc
      361 ggcctcggcc cgcttttttg gatcgagata gtgcaaaggg tcgatgcgac gcttccattc
      421 aatccaccgc gcgcgcgagt tggccgtgtt caaatcatct tcgatcttaa atcccatgcc
      481 gcgcgcgaaa tcctgcgcgc ctttgccgac aatcaaatga tggtcagtct gttcgctgac
      541 agctttcgcg acgagcgacg gggtccgcac gccttccaga caggcgactg cgccggcctg
      601 ttttctcggc ccgtgcatca ccgacgagtc gagctgaacc acgccatcag cattcggcag
      661 tccaccataa ccgacgctgt cgtccagcgg atccaactca acgatattca cgccggcgac
      721 cagggcgtcg aggacgtctt cacctttggt gatcattgag tacgctttct gcacgcacgt
      781 cacgtcaccg ccgttcttga atcggttgcc gttcgatgaa gcaacgacta aaggtttgac
      841 cgctgccgga atcagcatcg tcggcgcgtt agctttcacc acgcgttcgg aagcaagtgc
      901 aacgccggcc acggcgctgc tgatcatgaa atctcgacgt ttcatcgcag cttaacctcg
      961 aattgtttta ttgagcacgc gggggacaag ctaagactaa tcgcgggttc agtcaacttg
     1021 aaatcggaga cgttgtgagg ctgaggcctt cgcgatccga tcgatgatgg tgacttgcag
     1081 cacatacctg ccgggagcaa gcccctcaag cttcagttcc gcggcgtact gaattcgcgc
     1141 caggtccgtc tcgccgtcag tgcttatccg gtgtagtggg tcggttatta ccggttcgtc
     1201 atcgcgaaac acctggatct gcgccgccag atcaggtttg gccggcggcg tgctgccggc
     1261 gggcggcgga tttccattac cactcgttga ccccggcccg ctggcggcgt tgtagatgat
     1321 cgtcacaaag cgaagatatg acgatgaagc aaaccggcgc gcgacattga gattgacctg
     1381 atccgacaac gggtcggttt tcgcttcagg cgggtcgctg ggattagttg tcggggccct
     1441 tcgctcaccg acgagaagtg tactcaacgc gagcttcttc gccgaaaaat ccgatatttc
     1501 aatccagtcc catacgcttc ctgccggacc gccgtgttca tccgccgcca cgatccgcac
     1561 ctggtacaga cccggcttca gggtcgagta atgggtatag gtgatgttcc gcggcacggt
     1621 gtcctcggca gacttcgcgc gcaccgtcaa tcgcttgtcg aaagaatcca ggaccttgcc
     1681 ttcgtcattc agaaccaagc ccgccagcag aatggccccg gtgggaactc cagctttatg
     1741 ctcaagatgc agcgacgtgg gatccagcct gacggacgtg atcagcacat cacccttcag
     1801 cgagctatta atgaagttta gagttacatc aaccggaaag cctgacttcg gaattgcggc
     1861 ttgcagaact ttgcgcactt cggcagttct gttgttctca cctgggggag cagcgggctt
     1921 cttcgtggcg gcgtcgggcg tctcgcccac actatttcgt gatcgcacgg tcaaatcagg
     1981 acgaccaatc acactgagtt ccaaccgtcg ctgtttcgga ttgagctcct cgttcgggtc
     2041 tggccgccac gccaccagat agtaaaccga ggcttcgttc agccccctgg tgagggccac
     2101 ggacaaagcg ttgctattga agaaagccct ccctccggtg tcgttcgcca acgcattcag
     2161 tccgtcttgc gacgcgccga gttcacccat cgtcccacgc gtcatacgtc cggaagtatc
     2221 aaaaatcaca ggcgtgctgg catcgggctg cccggtggcc agcccgcgcg catcgatcga
     2281 gtagattacg aacgcagacg acgcggcaga agcagttacc ttgcgcaggc gcgcatacga
     2341 gtcagagttt ctggaatcga gcaaaaagcc gtcggacaac aagaacagca ctttgcggcc
     2401 gggcgccgaa cgaaactttt ccattaccca ttgaagcgaa gtcagagtgg aggttgtgcc
     2461 caccgctgcc attcgcagaa tcgtggacgc gcgcgcccgt acctcttctt cggctcgagc
     2521 gcgaccgagc attggatttt ctcgcaaaac ctgatcggcg aagacatcta acacatcgcg
     2581 gtcgcgggca tcgattcgca gcgcttgaaa ctctgacatc ggtggcgact gatagtcgcg
     2641 cgatttgaac ggccgaggac gcagccgctc gacagccttc agcagggcag gtttgttgtc
     2701 ggtgagctgc tggagaaaac cgatttgacc gctcgccgcg atcagcgcca cctgatcgtt
     2761 ttgtcccatc tcgcgatcga caaactgtgc cagcagtttt cgcgcgtggt gcatgcttcc
     2821 ttcggaaagg tgaagatcgt cgataaagaa aaataccagg cgtccccgat ccagtggcac
     2881 gggcgccccg gcgttggatg ccacgcctcg cgcggccgcg agctgcgcct cctcgttcga
     2941 gctgcccgct ttgatgagct caaagaaaga aatctcgcgg ggtttgccgt caaccttgag
     3001 cacgaaatgt tcgcgcttta gctcgtctac aaatttcccc tgcttatcga aaaccatcac
     3061 gtccgtctgg acgagggaag tgttgaccct gattacatct ggattttgat tttgcggttg
     3121 ttgtgcggtc gcggaaatgg cagacgcgca gaatgcggtg aagaggattg cgagctgttt
     3181 gagcaa
//
LOCUS       DATDBY010000288         2579 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1463304, whole genome shotgun sequence.
ACCESSION   DATDBY010000288 DATDBY010000000
VERSION     DATDBY010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2579
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1463304"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..661
                     /locus_tag="VIT19_05340"
     CDS             <1..661
                     /locus_tag="VIT19_05340"
                     /inference="COORDINATES: protein motif:HMM:NF022007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HEY5838441.1"
                     /translation="TRESTLFTVMRNGVLEYPLLAKPLNVAGLTPDEIARRLSAEIKV
                     IRNPRPSVSVRDYASHFVLITGAVDNPGRKVLRREAMPLFTLLAEALPRSDAATVTVV
                     RNGKETNLSVNRTAELSMLVMPGDVIRVSPASGQFVYVGGEVASAGEKELRQGMTLTQ
                     LLLAAGGVRQDRQFTAKISRRDGSGFLRAQDHNLKAIEQGKAADPLLQAGDRIEVKSG
                     M"
     gene            742..1191
                     /locus_tag="VIT19_05345"
     CDS             742..1191
                     /locus_tag="VIT19_05345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838442.1"
                     /translation="MNLFSRAGLANLLIGKSIVEALLVTTVAAGFYLSTTNPSLRGWL
                     DHADAQTISGWAVDGDNPGRRVEVQLFIDDQFIEQRTAAEVRPDVRQAGRAADEWHGF
                     VFKTPTLPAGEHEARVYLLHRGASPARRTLQIIGKPLRFTVHSTPVQ"
     gene            1188..1895
                     /locus_tag="VIT19_05350"
     CDS             1188..1895
                     /locus_tag="VIT19_05350"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family glutamic-type intramembrane
                     protease"
                     /protein_id="HEY5838443.1"
                     /translation="MNDSPSSPDISSAPQAAALSDRTLAIWEIASVASSVVIAEWMLA
                     SAAGFSKALIAVPVIFGVLLMFVSHRVRRESLRDVGFRFDTFLPALYLLAVPVLLMAG
                     ACLLIAWTTGASISFLRWHPNRNLALQLAIGFAWALAQQYVLQGFFNRRAMIVLGRGW
                     LSVSVVAVIFGLLHLPNPWITLITLIAGGIWAAVYQRAPNLFALAVTHSLMTWFIVST
                     LPASMLRHLRVGLGYFG"
     gene            2002..>2579
                     /gene="rnpB"
                     /locus_tag="VIT19_05355"
     ncRNA           2002..>2579
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VIT19_05355"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
BASE COUNT          540 a          693 c          758 g          588 t
ORIGIN      
        1 gacgcgcgaa tcgaccctct ttaccgtaat gagaaacggt gttttggagt atcccttgct
       61 cgccaagccg ctgaatgtcg ccgggctcac gcctgatgag atcgcgcgcc ggttgagcgc
      121 agagatcaaa gtcattcgga acccgcgccc gtcggtgagt gtgcgcgatt atgcgagcca
      181 ctttgtttta ataaccggcg ccgtggacaa ccccggacgc aaggtcctac gccgtgaggc
      241 gatgccactg ttcacgctgt tggctgaggc cttaccccgc tcagatgccg cgaccgtgac
      301 agttgtcaga aatggcaagg aaacaaatct ctcggtgaat cgcactgccg agttgtcgat
      361 gctggtgatg ccgggcgatg ttattcgtgt ttcgccggcg tcgggtcagt tcgtttacgt
      421 tggcggcgaa gtcgcttcgg caggtgagaa ggaattacgt cagggaatga cactaacgca
      481 attacttctg gccgccggtg gcgttcgtca ggatcgtcag ttcaccgcaa aaatatcgcg
      541 ccgcgatggc agcggcttcc tcagagcgca ggatcacaat cttaaggcca ttgaacaggg
      601 aaaggcggcc gatcctttgc tgcaagccgg tgatcgaatc gaggtcaagt caggtatgtg
      661 ataatctctg ccgcatgaga cgcagatgac gaagggcggt gcgcacgcgt gccgcccttt
      721 ttcgttgcct gaatagcaga catgaatctc ttttcacgtg cgggactggc caacttgcta
      781 atcggtaagt ctatcgtcga agcgctgctg gtcacgacgg ttgcagcagg cttctacctt
      841 tcgacgacga acccgagcct gcgtggctgg ttggatcacg cagacgcgca aacaatttcc
      901 ggttgggcag tggacggtga caatccgggc cggcgcgtgg aggtacaact cttcatcgac
      961 gatcaattca tcgaacaacg cacggccgct gaggtgcggc cagacgtacg gcaggcaggg
     1021 cgcgcggcgg atgaatggca cgggtttgtc ttcaaaacgc cgacgctgcc ggccggcgaa
     1081 catgaagctc gcgtctatct actccatcgc ggcgcctcgc cggcgaggag gacactccag
     1141 ataatcggga aacccttgcg cttcacagtc cattccacac ctgttcaatg aacgattcac
     1201 cttcatcccc ggatatttcg agtgcgcctc aagctgcggc gctgtcggat cggacgctgg
     1261 ccatctggga gatcgcttct gtcgcttcct cagttgtgat tgcggagtgg atgctggctt
     1321 ctgccgcggg gttcagcaag gcactcatcg ctgtgccggt gatctttggg gtgctgttga
     1381 tgttcgtgtc gcaccgcgtc cggcgcgaaa gcctgcgcga cgttggcttt cgattcgaca
     1441 cctttctgcc cgcgctgtat ctgttggcgg tgccggtcct gctgatggcc ggagcatgcc
     1501 tgttaatcgc gtggacgacc ggtgcgtcga ttagttttct gcgatggcat ccgaatcgaa
     1561 acctggcgct ccaactcgca attggatttg cctgggccct ggcgcaacag tatgtgctcc
     1621 agggcttctt caataggcga gcaatgattg tgctcggccg tggctggctt agcgtttcgg
     1681 tcgtggccgt tatcttcggt ttgctgcacc ttcccaatcc ctggatcacg ctgattactc
     1741 ttatcgcagg cggaatttgg gccgcagtct atcagcgcgc accgaatctc ttcgctctgg
     1801 ctgtcaccca ttcgctgatg acgtggttta ttgtctcaac cctgcccgcg tcaatgcttc
     1861 gccacctgcg cgtcggttta ggctatttcg gctagaaacc agtgacaatt tggcaaaaca
     1921 gttcggtcgc acccgcttcg aatgggctgt tcgtctgtgc gtgttgaaca atggtttgct
     1981 ataattaccg cgccttgcat gagagcaggt cgggcggtcg ctgcttcggt ctcaaaatct
     2041 gaatttcagg tctcagattt gaaatcagac gcgaatcgaa ggagaggaaa gtccgaacac
     2101 catagggcag cgagcccgct aacggcgggg cggcagcttc ggattcaaga aattaaaatt
     2161 tcaagattcc aaagctgacc gacgacaagt gcaacagaaa acagaccagc cggcggcaag
     2221 tcagattttg agatctcaga tctgaatccg caggtgatgg gtgaaacggt gcggccgcaa
     2281 ggctaatctc agatctcaaa tttgagattt gagagagtaa gagcgcaccg gcgcgtgtgg
     2341 tgacatgcgc ggccaggcaa actcctcgcg gtgcaagacc aaatagggaa gcactttgaa
     2401 atctcagaat caaatttgag attcaaaatg ggctgcccgc ccaaggcttc cgggtaggtc
     2461 gctggatcca atcggcaacg gttgggctag aggaatgatc gcccttccgc tttcagattt
     2521 gagatctcag atctgaaatt tcaaatctga aagcgggaga cagaattcgg cttacagac
//
LOCUS       DATDBY010000289         2370 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_545746, whole genome shotgun sequence.
ACCESSION   DATDBY010000289 DATDBY010000000
VERSION     DATDBY010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2370
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_545746"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..999)
                     /gene="tatC"
                     /locus_tag="VIT19_05360"
     CDS             complement(<1..999)
                     /gene="tatC"
                     /locus_tag="VIT19_05360"
                     /inference="COORDINATES: protein motif:HMM:NF013097.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEY5838444.1"
                     /translation="MINKPDKKEAREDEPGGQMSFLEHLDELRSRLIRSIIFVFLAAS
                     VAWAFSDHIYNFLARPVQHALSEAQQQRRVPIDGLNGQLATVPLSSLKPGDKLRFTFP
                     EAKQLGPASIPAGTSVIARVDKDAQGNLGLFADEQLVAGNEVVPKDVRLFDLTKGYEK
                     GTDPNDKLIVTTVAESFALYVRVSLYTAIAISVPFLLWQIWAFVAPGLFPHERKYVTP
                     FVMLSSVFFVLGAATAYYLIFPAAAKYLLGLGSDFRLLLKADDYFDFIILLMLGMGLV
                     SQMPAITYVLARIGVVTARWMVKVWRFAVIAILVIAAVLSPTGDIPNMLLFALPMVV"
     gene            complement(1173..1586)
                     /locus_tag="VIT19_05365"
     CDS             complement(1173..1586)
                     /locus_tag="VIT19_05365"
                     /inference="COORDINATES: protein motif:HMM:NF014470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEY5838445.1"
                     /translation="MYLLILDSLGNTELLLILVAALIFFGPRRLPQLSRQLGKSLSEF
                     RRASEDFKRTWEREVNSEIHEHGIDPASSFLDNATNRIRAAREAAARELNVFESEPRP
                     STPEIKPVDAELVEPRDATADSEPAKTEQPKHEWI"
     gene            1750..>2370
                     /locus_tag="VIT19_05370"
     CDS             1750..>2370
                     /locus_tag="VIT19_05370"
                     /inference="COORDINATES: protein motif:HMM:NF016553.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838446.1"
                     /translation="MAQSWAANSLEQFARVAEKVAATTKKLEKAALLGEYLQPLSDED
                     LARAARYFAGQVFAQHDARTTNVGGSIISEALVGATGLQADLGVRWARWGDAGDVAFE
                     MFTEANLRNTPSLSLGDTEDLLIRLSSTRGKKAKTDLLTKVLSKATPLEAKYLVKLLS
                     SDLRIGLREGLVEDSIARAFKQPLADVSLANMLRGDIGEAAVRARAG"
BASE COUNT          535 a          674 c          702 g          459 t
ORIGIN      
        1 cacgaccatc gggagcgcga acaaaagcat gttcgggatg tcgccggtgg gcgacaggac
       61 cgcggcgatg acgagaatgg cgatcaccgc gaagcgccaa accttcacca tccagcgcgc
      121 ggtcactacg ccaatgcgcg ccagcacgta agtaatcgcc ggcatctgcg agaccagacc
      181 catccccagc atcagcagga tgatgaaatc aaagtagtcg tccgccttca gcagcagacg
      241 aaaatccgac cccagtccca gcagatattt cgcggcggcg ggaaagatca agtaatacgc
      301 agtcgcggcg ccgagcacga aaaagacgct cgacaacatg acgaatggcg tgacgtattt
      361 gcgctcgtgc ggaaaaagtc cgggcgcgac gaacgcccaa atctgccaca acagaaacgg
      421 cactgaaatc gcgatcgcgg tgtacaaaga aacccggacg tacagcgcga aggattcggc
      481 cacggtggtc actatcaatt tatcgttggg gtctgtgccc ttctcgtagc ctttagtgag
      541 atcaaacagc cgcacgtcct tcggcacgac ctcgtttcct gcgactagtt gctcgtcggc
      601 gaacagccca aggtttcctt gcgcgtcttt atcgacgcgc gcaatgaccg atgtgcctgc
      661 cggaattgaa gccgggccga gctgcttcgc ctcaggaaaa gtaaaacgca gcttgtcgcc
      721 tggttttagt gaactgagcg gaaccgtagc gagctgaccg ttcaatccgt caatcggcac
      781 gcgcctctgc tgctgagctt cactgagtgc gtgctggacg ggccgcgcga gaaaattgta
      841 aatgtgatca gagaaagccc aggccactga agcggccagg aaaacaaaaa taatgctgcg
      901 aatcagacgc gagcgcagct catccaggtg ttcaagaaac gacatctgcc cgccaggttc
      961 atcctcgcgc gcttctttct tgtctggttt gttgatcaat tgcaggctcg gcattttaga
     1021 attctaaatc cgcgaacgac ggcgtttccg tgactggagc gcaagcgtct cgcttgcacc
     1081 agatgccaaa ttcgaactta gtagcataaa taccgtgtgg tgcaagtcgg gcgtcggcaa
     1141 gcgggacgct tgcgctccag tcaacgacgt agctatatcc actcgtgttt tggctgttcg
     1201 gttttcgcgg gctcactgtc agccgtggca tcgcgtggct cgacgagttc cgcatcaacc
     1261 ggcttaatct cgggcgtgct gggccgcggt tcagattcga atacgtttaa ctcacgcgcg
     1321 gcggcttcgc gtgcggcgcg gatccggttg gtagcgttgt cgagaaacga actcgcggga
     1381 tcgatgccgt gctcgtgaat ttcggaattg acctcacgtt cccaggtgcg cttgaagtct
     1441 tcggatgcgc ggcgaaattc ggaaagactc ttgccgagct gccggctcag ttgcggcaga
     1501 cgccgcggcc caaagaaaat cagcgccgcc accagaatca gcagcaactc agtatttccc
     1561 aaagaatcga gaatcagcag gtacatctct taacggctca caatttggtg agacgggtcg
     1621 agaaagattg tagcgcgtgc cggggcgtgt cagaaactcg acttcgactg gagtgcggca
     1681 aagccgcgat aagcgcttcc cggctcgagc catttgacag agcggccaag tcacacgaat
     1741 cttcgagtga tggctcaatc ctgggcagca aattcactcg agcagttcgc ccgcgtcgcc
     1801 gaaaaggtcg ccgcgacgac gaagaaactc gaaaaggcgg cgctcctggg ggagtatctt
     1861 cagcctcttt cggacgaaga tttggcccgc gcggcgcgtt actttgccgg acaagtgttc
     1921 gcgcaacacg acgcgcgcac gacgaacgtc ggcggcagca tcatcagcga ggcgctggtc
     1981 ggcgcgacgg ggttgcaggc tgatttgggc gtacgttggg cgcgttgggg cgacgcgggc
     2041 gatgtcgcgt tcgagatgtt cacggaagct aatcttcgga acacgcccag tcttagtctc
     2101 ggcgacacag aagatcttct gattcgcttg agcagcaccc gtggaaaaaa agctaaaacc
     2161 gatttgctga cgaaggtctt atcgaaagcc acgccgcttg aggccaagta tctcgtgaaa
     2221 ctcttgtcca gcgacttgcg gatcggttta cgcgagggcc tggtggaaga ctcgatcgcg
     2281 cgcgccttca aacagcccct ggctgacgtc tcgctcgcca acatgttgcg cggcgacatc
     2341 ggcgaagcag ccgtgcgcgc gcgcgccggc
//
LOCUS       DATDBY010000290         3048 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2478826, whole genome shotgun sequence.
ACCESSION   DATDBY010000290 DATDBY010000000
VERSION     DATDBY010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3048
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2478826"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VIT19_05375"
     CDS             <1..252
                     /locus_tag="VIT19_05375"
                     /inference="COORDINATES: protein motif:HMM:NF018652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838447.1"
                     /translation="VIVERTELTEEDARSEAIFLGLRLMRGIDLNSYRARFGTNLREQ
                     FNGELDRLKTAGLVAIDEERLKLTTRGALLSNEVFAALA"
     gene            complement(394..1623)
                     /locus_tag="VIT19_05380"
     CDS             complement(394..1623)
                     /locus_tag="VIT19_05380"
                     /inference="COORDINATES: protein motif:HMM:NF018004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 family protein"
                     /protein_id="HEY5838448.1"
                     /translation="MAVIRPFNALRPAAECAPRVAAVPYDVVNTEEARALASGNPWSF
                     LHVSRAEIDLPDATPIYSDEVYAKAVANFDTLKKTCPLEPEGEASLYLYRLIMGNHEQ
                     IGVVACCSVDEYDSDVIRKHERTRREKEDDRTRHILILRAQTGPVLLTYRAQPGIDSL
                     VNAALQQNEPLYDFVANDDIRHTIWRIPNPGAFVEAFAGVPNLYIADGHHRAASASRA
                     RAQLKEHGFSFIGNEEYNFFQCVLFPDQQLQILPYNRIVRDLNGMSPAGFLSDLGKAF
                     KVTDGAPPSPKERGQWSMYLDGSWYGLALPDDAARPEGVVESLDVSILQERLLDPFLG
                     IKDVRTDKRIDFVGGIRGTEELKKWVDEGKAAVAFSLYPTTIDDLLRVSDAGQIMPPK
                     STWFEPKLRDGLLIHEI"
     gene            complement(1813..2667)
                     /locus_tag="VIT19_05385"
     CDS             complement(1813..2667)
                     /locus_tag="VIT19_05385"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEY5838449.1"
                     /translation="MHKFNYEREIEVATELGRSAGAVLLAHYHSPFLVEQKVNALLET
                     EEVTAADREANDLIVRRLAHEFPGDGILAEESVDTDERLNKERVWLIDPMDGTKNFVQ
                     RDGDFAVQIGLAVDGEAVLGVVYQPVRDVLYRAVRGEGSWLEKDGKQAERMHVSNKTD
                     PAEMVLASSRSHRSPRMERVVDSFGFKFETRRGSVGVKVGLIAEQEADLYLHLSPGTK
                     QWDTCAPEIVLTEAGGRLTDLFGKPLRYNAARIDNRNGVVATNSAAHELVIDSLKPLL
                     REFGRTPV"
     gene            2758..>3048
                     /locus_tag="VIT19_05390"
     CDS             2758..>3048
                     /locus_tag="VIT19_05390"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY5838450.1"
                     /translation="MSKNDCAMTDGTARYRARFKDAAEGHFRQAQDLWMSSIGVGTYL
                     GQPDEQTDRRYTEAVVRAVELGVNVIDTAANYRFQRSERSIGAALTELQGRGF"
BASE COUNT          657 a          879 c          861 g          651 t
ORIGIN      
        1 gtgatcgttg aacgcaccga attgactgag gaagacgcgc gctcagaagc gatctttctc
       61 ggattacgtc tgatgcgggg aattgatctg aacagttacc gcgcgcggtt tggcacgaat
      121 ttgcgcgagc aattcaatgg cgagctggat cggttaaaga ccgcgggcct ggttgcaata
      181 gacgaagaac gcttgaagct gaccactcgc ggggctttgt tatcgaatga agtgtttgcg
      241 gcgctggcgt gagctctcat tcacaccgcg cttcagcgcg gtggctcaag ccggattaac
      301 agtcggaaac cgtttaaacg gttttcaatt ttctcgcaac aaactgtcac cgggctgaag
      361 cccggtgtga ataaaccgtc ccatcggcgc tccctaaatc tcgtgaatca gcagtccgtc
      421 acggagcttg ggctcgaacc aggtagattt cggcggcatg atctggccgg cgtctgagac
      481 gcgcagcaaa tcatcgatcg tcgttgggta aagcgagaac gcgaccgccg cttttccttc
      541 atcaacccac tttttcagtt cttcagtgcc ccgaatcccg ccgacgaaat cgattcgctt
      601 atcagtgcgc acatccttga tgccaagaaa cggatcgagc aaacgttcct gcaagatact
      661 gacgtccaac gattcaacta cgccctcagg ccgggccgcg tcgtcgggca gcgcgagccc
      721 ataccaacta ccgtcgagat acatgctcca ctgtccgcgc tccttcggcg atggcggggc
      781 gccatctgtc accttgaaag ctttacccaa gtccgagaga aaaccggccg gcgacatgcc
      841 gttaagatcg cgcacgattc gattgtaggg aagaatctgc aactgctggt cgggaaagag
      901 cacgcactga aagaagttgt attcttcatt cccgataaag ctgaagccgt gctctttcag
      961 ttgcgcgcgg gcgcggctgg cgctggcggc gcggtgatgg ccatcggcga tgtaaaggtt
     1021 aggcacgccc gcaaacgctt caacgaatgc gcccgggttt ggaattcgcc agatcgtgtg
     1081 acggatatca tcattggcaa caaaatcgta aagcggctcg ttctgctgca aggccgcgtt
     1141 aaccagtgaa tcgatgcctg gctgcgcgcg ataagtcagc agcaccggcc cagtctgcgc
     1201 gcgcaggatg aggatgtgcc gggtgcgatc atcttccttt tcgcgcctcg tgcgttcgtg
     1261 tttacgaatg acgtcgctgt cgtattcatc aaccgagcaa caggcaacga cgccaatctg
     1321 ctcgtgattg cccataatca gacggtagag atagaggctg gcttcacctt ccggttccag
     1381 cggacacgtc ttcttcagcg tgtcgaaatt cgcgacggcc tttgcgtaaa cttcatcgct
     1441 gtagatcggg gtggcgtcgg ggagatcgat ttcggcgcgc gacacgtgca gaaaactcca
     1501 cgggttgccg gacgccagcg cgcgcgcctc ttcagtattc acgacgtcgt aaggcaccgc
     1561 ggcgactcgc ggcgcgcatt cagccgcagg gcgaagcgca ttgaaaggac gaatgactgc
     1621 catccgcact cctcacttga acttggaatc ttgaaaactt gagttaagac taactggcca
     1681 ctaataactt tgccaaggac gcctaatttg gagtgcgccg gcccctgacg gcgctttgga
     1741 ttcgttcgtt gaaaaaggcg ttaagcaatc taacgcgccg tcgacgcttc gttctgccgg
     1801 cgcactccaa gttcaaaccg gcgttcggcc aaactcgcgc aacagcggct tcaggctgtc
     1861 gatcactaat tcgtgcgcgg cgctgttcgt cgcgaccacg ccgttgcgat tgtcgatgcg
     1921 cgccgcgttg taacgtagag gcttaccgaa cagatcagta agtcgcccgc ccgcttccgt
     1981 caaaacgatt tccggagcgc acgtgtccca ctgcttggtg cctggggaaa gatgcaggta
     2041 gagatcggct tcctgttcag caatcaagcc gaccttcaca ccgacggatc ctctgcgcgt
     2101 ctcaaatttg aaaccgaatg aatcgaccac gcgctccatg cgcggactgc ggtgcgagcg
     2161 actcgacgcc aggaccattt ccgccggatc ggtcttgtta gaaacgtgca tgcgctcagc
     2221 ttgtttcccg tccttttcca gccacgatcc ttcgccgcgc acggcgcgat acaggacatc
     2281 gcgcacgggt tgatagacaa cgccgaggac ggcctcgccg tcaaccgcca gaccgatttg
     2341 gacggcaaaa tctccatcgc gctgcacgaa gttcttggtg ccgtccatcg gatcgatcag
     2401 ccagacgcgc tctttgttca ggcgctcgtc ggtatcaact gactcttccg cgagaatgcc
     2461 gtcgccggga aactcatgcg ccagtcgccg cacgatgaga tcgttggctt cgcgatcagc
     2521 cgcggtcact tcttccgttt ccagcagcgc attaactttt tgctcaacga gaaatgggct
     2581 gtggtagtgc gcgagcagaa ccgcgcccgc agagcggcct aattccgtcg cgacttcaat
     2641 ttcgcgctcg tagttgaatt tgtgcacggc taattgaact tcctacacgc taacacaagg
     2701 catcggttga tcgaagtcac gcgcgcttct atagtcttga ccaactcaga acacgcgatg
     2761 agcaaaaacg actgcgccat gacggacgga actgcgcgtt atcgagcgcg ctttaaagac
     2821 gccgccgaag gtcactttcg gcaggcacag gatctttgga tgtcgtccat cggcgtcgga
     2881 acgtatcttg gccagccgga tgaacaaacg gatcggcgct atacggaagc ggtcgtgcgc
     2941 gcagtcgagc tgggcgttaa cgtcattgac acggcggcga actatcgctt tcaaagaagc
     3001 gaacgatcga tcggcgcggc gttaactgaa ttgcaggggc gcggtttt
//
LOCUS       DATDBY010000291         4379 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2699218, whole genome shotgun sequence.
ACCESSION   DATDBY010000291 DATDBY010000000
VERSION     DATDBY010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4379
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2699218"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1290)
                     /gene="gcvPB"
                     /locus_tag="VIT19_05395"
     CDS             complement(<1..1290)
                     /gene="gcvPB"
                     /locus_tag="VIT19_05395"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF003346.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HEY5838451.1"
                     /translation="MSINKVTNHISPNEQLIFERSQPGRAGFSLPPLDVDETPLEEII
                     PREFQRDDALAGVPEVSEVDVIRHFTRISTWNYSIDLGMYPLGSCTMKYNSRLNEKVA
                     RIAGFANLHPLAAEAEAQGALEVIYELQQHLAEITGLPGISLQPAAGAHGEMTGIMII
                     RAFIDARDGKEKSAQRRTMLIPDSAHGTNPASAHLSGFTVKTIKSTAEGLTDLDHLRE
                     LCAHGDVAGLMLTNPNTLGLFERNIREICDIVHDAGGLVYMDGANMNALVGVARPGDM
                     GVDVIHLNLHKTFSTPHGGGGPGSGPCCCTKELEPFLPVPRVVTTGTYPIFKLDFNYP
                     QSIGRVKAFYGNYGMMLRALAYILTHGRDGLREATEAAVLNARYIAHGLVSDYEKPFA
                     GAPMHEVVFTDKRQARKGVHTLDIAKRLIDYGFHPMTI"
     gene            complement(1393..1707)
                     /locus_tag="VIT19_05400"
     CDS             complement(1393..1707)
                     /locus_tag="VIT19_05400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838452.1"
                     /translation="MGPRGIEEVAKQCAQKAHYAARRISEIEGFSLPFSAPFFNEFVV
                     TGPGEAASLLARLASESGIDGGIALSRYDANRPNDFLVCVTETNTRQEIDALVVGLNA
                     MS"
     gene            complement(1717..2739)
                     /gene="gcvPA"
                     /locus_tag="VIT19_05405"
     CDS             complement(1717..2739)
                     /gene="gcvPA"
                     /locus_tag="VIT19_05405"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF001696.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HEY5838453.1"
                     /translation="MRYIPNSPDERAEMLRQIGVDSIENLFDSIPEGLRQRGPLAVPA
                     ALSELELLKKFDAMAVHNEAARRISFLGGGAYSHYSPTIVDHLISRSEFFTAYTPYQP
                     EISQGTLQAIFEFQTLVCQLTGMDIANASMYDGSTAMAEAVLMAERVTKRSKVIASSA
                     IHPEYLQVAHTYVQHAGIELQHSAYSTETGATSADSLTGLDDKTAAVVVQSPNFFGCV
                     EDVQALADKAHAVGALLIVVVTEAISFGLLKSPGACGADIVVAEGQSFGVPLSFGGPY
                     VGLFATREKFARQIPGRLVGEAFDAKGRRGYVLTLATREQHIRREKATSNICTNEGLI
                     ALAATI"
     gene            complement(2745..3134)
                     /gene="gcvH"
                     /locus_tag="VIT19_05410"
     CDS             complement(2745..3134)
                     /gene="gcvH"
                     /locus_tag="VIT19_05410"
                     /inference="COORDINATES: protein motif:HMM:TIGR00527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEY5838454.1"
                     /translation="MANVPDDLHYSKDHEWVRVEGDTAVIGITDHAQEQLGDVVYVEL
                     PKVGESFPAHESFGSVESVKAVSEIFTPISGAITEVNESLNDEPEKVNKDPYGEGWMI
                     KMTMNAAGEVDSLLTAAEYEDFTKAEE"
     gene            complement(3185..>4379)
                     /gene="gcvT"
                     /locus_tag="VIT19_05415"
     CDS             complement(3185..>4379)
                     /gene="gcvT"
                     /locus_tag="VIT19_05415"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: protein motif:HMM:NF001567.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEY5838455.1"
                     /translation="RMLVSEFTGSFIENTPSASEVCAQVSAPAVELKRTPLNEAHRRL
                     GGRMVEFGGWDMPVQYPAGTVNEHVRTRTHAGLFDVSHMGEVDVHGPDAIAFVNRLTS
                     NDVSMLVDGQAHYTALTTPQGTVIDDLLVYRLAADHLLLVVNAGTTGKDWEWIKSHHA
                     GENVELRNASAEYCQLALQGPDAITILQQLTETNLAEIKYYHFTRGKVDGLDAIISRT
                     GYTGEDGFEVYAAPEKAEQLWNKILDAGNYGTDEGVMPCGLAARNTLRLEAGMALYGH
                     EIDEHTTLLEANLGWITKLNKGDFIGREALAKQKEEGIKRKLIGFEVTDRGIARDEQD
                     ILVNGERVGRATSGSPAPFLKKNIGMGYVPKELSAVGTAIEIDVRGRLVAAQIVPLPF
                     YKRAK"
BASE COUNT          914 a         1282 c         1187 g          996 t
ORIGIN      
        1 gatcgtcatc ggatgaaatc cgtaatcgat caaacgcttc gcgatgtcga gcgtgtgcac
       61 acccttgcgc gcctggcgtt tgtcggtgaa gacgacttcg tgcatcggcg cgccggcgaa
      121 aggtttctcg tagtcggaca cgaggccatg cgcgatgtaa cgcgcgttca gcaccgcggc
      181 ttcggtcgct tcgcgcaagc cgtctcgacc gtgggtcaga atataagcga gcgcgcgcag
      241 catcatcccg tagtttccgt agaacgcttt cacgcggccg atcgattgcg ggtaattgaa
      301 gtcgagtttg aagatcgggt aggtcccggt agtgacaacg cgcggcaccg gcaagaacgg
      361 ctcgagttct ttcgtgcagc agcaaggacc tgaacccgga ccgccgccgc cgtgcggtgt
      421 cgaaaaagtc ttgtgcaggt tcaggtgaat tacatcaacg cccatatctc ccggccgcgc
      481 gacaccgacc agcgcattca tgtttgcgcc gtccatgtaa accaagcccc ccgcgtcgtg
      541 aacgatgtcg caaatttcgc gaatgtttct ttcaaacagg cccagcgtgt tcgggttcgt
      601 cagcatcagg cccgcgacgt cgccgtgcgc gcacagttcg cgcaggtgat cgagatccgt
      661 caggccttcg gcagtcgatt tgattgtttt aacagtgaag cctgacaggt gcgctgaagc
      721 gggatttgta ccgtgggcgg aatcgggaat cagcatcgtg cgacgttgcg ccgatttttc
      781 cttgccgtcg cgtgcgtcga tgaaggcgcg gatgatcatg atgccggtca tctcgccgtg
      841 cgcgccggcc gcgggttgca gcgaaatacc cggaagtccc gtgatttccg cgagatgctg
      901 ctgaagttcg taaataactt ccagggcgcc ttgggcttct gcctcggccg ctagtggatg
      961 tagattcgca aaaccggcga tacgtgcgac cttctcattc agccgcgagt tatacttcat
     1021 tgtgcacgag ccaagcggat acatgcccag gtcgatcgaa taattccatg tcgagatgcg
     1081 cgtgaagtga cgaatcacgt ctacctcact aacttccggc acgcccgcga gcgcatcatc
     1141 gcgctgaaat tcacgcggaa tgatttcttc aagcggcgtc tcatcaacgt ccaacggcgg
     1201 cagactaaag ccggcgcgcc cgggttgcga gcgctcgaag atgagttgct cgttagggct
     1261 gatgtgattt gtgactttgt taatactcat tcaatcgaac gttgaaaact atgtttatgg
     1321 gacatatggg acctatgcga cctatacgac ttatgcgacc tatacgtccc attcgtccta
     1381 tacgtcccat cattaggaca tcgcatttag tcccacaacc agcgcatcaa tctcttgacg
     1441 tgtgttcgtc tctgtcacgc aaaccagaaa atcgttaggt cggtttgcgt cgtaacgcga
     1501 caacgcgatt ccaccgtcga ttccgctttc gctcgcgagc ctcgccagga gcgaagctgc
     1561 ttcgcccggc ccggttacga caaactcatt gaagaacgga gcggagaagg gaagcgagaa
     1621 gccttcgatc tccgaaatcc tgcgcgctgc ataatgggcc ttctgggcgc attgcttcgc
     1681 gacttcttca ataccgcgcg gacccatcgt ttcgagttag atcgttgccg ccagcgcaat
     1741 cagtccttcg ttcgtgcaga tgttggacgt cgctttttcg cgccgaatgt gttgttcgcg
     1801 cgtggccagc gtcagcacgt atccgcggcg accttttgca tcgaaagctt ccccgaccag
     1861 tcggccgggt atctgtcgcg cgaatttttc gcgcgtagcg aacaacccaa cgtaaggccc
     1921 gccaaacgaa agcggcactc cgaacgactg accttcggcg acgacgatgt ctgcgccgca
     1981 ggcgccgggc gacttcaaca aaccaaacga aatcgcttcc gtgacaacta caatcagcag
     2041 cgcgccaacg gcatgagcct tgtcggccag agcctgcacg tcttcgacac agccgaaaaa
     2101 gtttggcgac tgcaccacaa ctgccgcggt cttgtcgtcg aggccagtca aactgtccgc
     2161 cgatgttgcc ccggtctcgg tcgaatacgc cgaatgctgt aattcaatgc cggcatgctg
     2221 cacgtacgtg tgcgccactt gcagatactc aggatgaatc gcggatgacg cgatgacctt
     2281 tgaacgtttg gtcacccgtt ccgccatcaa gaccgcctcg gccattgctg tcgagccgtc
     2341 gtacatcgac gcattcgcga tatccatgcc cgtcaactga cacacgagcg tctgaaattc
     2401 aaagattgcc tgaagcgtgc cctgggaaat ctccggctga tatggcgtgt aggcggtgaa
     2461 aaactctgaa cgcgaaatca ggtgatccac gatcgtcgga ctgtaatgcg agtacgcgcc
     2521 cccaccgagg aagctgatgc gccgagcagc ttcgttatgg accgccatcg cgtcgaattt
     2581 cttcaacagc tccaattccg aaagcgcggc cggaaccgcc aaaggcccgc gctgccgcag
     2641 cccttccgga atggaatcga ataagttttc tattgaatcg acgccgattt ggcgcaacat
     2701 ctcggcgcgt tcgtcgggcg agttgggaat gtagcgcaac gcgtttactc ttcggctttc
     2761 gtgaaatctt cgtactcggc ggcggtcaaa aggctgtcca cctcgccggc ggcgttcatc
     2821 gtcatcttga tcatccagcc ttcgccgtac ggatccttgt tcactttttc gggctcgtcg
     2881 ttgagcgact cgttcacttc agtgatggcg cctgagatcg gagtaaaaat ttccgaaacc
     2941 gctttgaccg attcgactga gccgaatgat tcgtgcgccg gaaacgattc gcccaccttc
     3001 ggtagttcga cgtaaaccac gtcgccgagc tgttcctgag cgtgatcagt gattccaatc
     3061 accgccgtgt cgccttcgac gcgaacccac tcgtggtcct tgctgtagtg cagatcatcg
     3121 ggaacgttag ccattgactc tcctctaatc agaagtcaga aatcagaagt cagcaaaatt
     3181 actactactt ggctcgcttg taaaaaggca gcggcacaat ctgcgcagct accaggcgtc
     3241 cgcgcacatc gatttcgata gcagtgccaa ccgccgaaag ttccttaggc acgtaaccca
     3301 tgccaatgtt cttcttcagg aaaggcgcgg ggcttcccga agtagcgcgg ccgacccgtt
     3361 caccgtttac caaaatatcc tgttcgtcac gcgcgatacc gcgatcggtg acttcaaaac
     3421 cgatcaactt tcgtttgatg ccttcttctt tttgtttcgc gagcgcctcg cgtccgatga
     3481 agtcgccctt gttcagtttg gtaatccagc cgaggttggc ttcgagcagc gtcgtgtgct
     3541 cgtcgatctc atggccatac agggccatgc ccgcctcaag ccgcaaagtg tttcgcgcgg
     3601 cgagaccaca cggcatcacg ccctcatcgg ttccatagtt tcctgcgtcg agaatcttgt
     3661 tccagagttg ttccgccttt tccggggcgg cgtaaacctc gaaaccgtct tcacctgtgt
     3721 agccggtgcg ggaaataatc gcgtcaaggc catcaacttt gccccgggtg aaatggtaat
     3781 acttaatctc tgccagattg gtttcggtta actgttggag aatcgtaatt gcgtcgggcc
     3841 cttgcagcgc cagttggcag tactcagcgc tcgcgttgcg taactcgacg ttttctccgg
     3901 cgtggtgcga tttgatccat tcccagtctt taccggtggt ccccgcgttc acgaccagca
     3961 gcaggtgatc tgccgctaaa cggtagacca gcaaatcgtc gatcacggtg ccctgcggtg
     4021 tcgttaacgc ggtgtagtgg gcctgaccat ctactaacat cgaaacgtca ttcgacgtta
     4081 atcgattgac gaacgcaatc gcatcggggc catggacatc gacctcgccc atgtgcgaaa
     4141 cgtcgaacag tccggcatgt gtgcgcgttc gcacgtgttc gttgactgtg ccggcgggat
     4201 actgcaccgg catgtcccag ccaccgaact caaccatgcg tccgcccagg cggcgatgcg
     4261 cttcattcag cggtgttcgt ttcaactcaa ctgcgggtgc tgacacttgt gcgcaaacct
     4321 cacttgcaga gggagtattc tcaataaacg atccggtaaa ttcggaaact aacatgcga
//
LOCUS       DATDBY010000292         2154 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_861506, whole genome shotgun sequence.
ACCESSION   DATDBY010000292 DATDBY010000000
VERSION     DATDBY010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_861506"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..405)
                     /locus_tag="VIT19_05420"
     CDS             complement(<1..405)
                     /locus_tag="VIT19_05420"
                     /inference="COORDINATES: protein motif:HMM:NF024882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEY5838456.1"
                     /translation="MAAIPTDIEIEPAPERSRLNEIIVIALVAAALLLGLCLASYNPN
                     DPSWNAAGEASARNWIGTVGANVAAALFQSIGLAAYLIPFLILAAAWRRFRTKRINAP
                     MYRLLGLTIVVLSAAALLTLANIHPFFDASFNA"
     gene            complement(505..1615)
                     /gene="prfB"
                     /locus_tag="VIT19_05425"
     CDS             complement(join(505..1542,1544..1615))
                     /gene="prfB"
                     /locus_tag="VIT19_05425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_319006089.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEY5838457.1"
                     /translation="MIDPLSIQELRESFDDLKKRVDQLGGFFDVPAKQTELSQIETQA
                     SAQDFWSNQEEAQKLLQQRSRLERVIQRQEKFETEISDAQVLFEFAEEDESSLTELRQ
                     LVKRLEHEIAEAETEMLLSGENDARNAICTIHPGAGGTESQDWAEMLLRMYLKWAERR
                     GFRTEVIDYQPGEEAGIKNVTFKVEGEYAYGLLSAEAGVHRLVRISPFDQAARRHTSF
                     ASLFVYPEIDDDIEVDINEKDLRVDTYRASGAGGQHINVTDSAVRITHLPTNIVVSCQ
                     NQRSQHQNRAVAMQVLRSRLYELEVEKRKAETAELEANKQDISFGSQIRNYVLAPYQL
                     VKDARTKLEKGDVDSVLNGDIDDFIKQYLLSKRAA"
     gene            complement(1654..>2154)
                     /locus_tag="VIT19_05430"
     CDS             complement(1654..>2154)
                     /locus_tag="VIT19_05430"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEY5838458.1"
                     /translation="SGSVRSIVGEFTPGSSHTLMPLGALRAGVFICIEAAHADLVRAF
                     TNSGAEVLINISNDGYLGPTAVMRQHLANAVFRAVENDRDMIRVTNSGIGAYIDSNGH
                     VHDATPSFQEAVRTWTISPGGGTTFYSRYGDVFVYGCALITLGFISATFMTRRKATHA
                     SGVLGN"
BASE COUNT          455 a          626 c          565 g          508 t
ORIGIN      
        1 ggcattgaag cttgcatcga agaatggatg aatgttcgcg agcgtcagca aagccgccgc
       61 ggaaagcacg acgatcgtca gtcccagcaa acgatacatt ggcgcattga tgcgctttgt
      121 gcggaacctg cgccaggcgg ctgcgagaat aagaaacgga attagatacg cggcgaggcc
      181 gattgactga aacaacgctg ccgcgacatt cgcaccgaca gttccaatcc aattgcgcgc
      241 actggcttca ccggcggcat tccaggaagg atcgtttgga ttatacgaag cgaggcacag
      301 cccgagcagc agcgccgcag ccaccagcgc gatcacgatg atctcgttca gtcgcgagcg
      361 ttctggcgcg ggttcgattt cgatatcagt tggaattgcg gccattttga atctgtgagc
      421 agtgggcagt gagcagaaac acgccctacc gcactctgct tttacttgtt actggtcacc
      481 tggtacctgt cacccgtcac ccgtttacgc tgctcgcttc gacagcaaat actgtttaat
      541 aaaatcgtcg atgtctccgt tgaggactga atcgacatcg cctttttcca gtttcgtgcg
      601 cgcgtctttc accaactggt acggcgccag cacatagttc ctaatctgcg agccgaatga
      661 gatgtcctgc ttgttcgctt caagttctgc cgtttccgct ttgcgctttt caacttcgag
      721 ttcataaagt ctcgagcgca agacctgcat cgcgacggca cgattctgat gttgcgaacg
      781 ctggttctga cacgagacca cgatgttggt cggcaaatgc gtgatgcgca ccgccgaatc
      841 cgtcacattg atgtgctgtc cgccggcgcc gctcgcgcga tacgtgtcca cgcgcaaatc
      901 cttttcgttg atatcgactt cgatgtcgtc gtcgatttcc ggatagacaa acaacgaagc
      961 aaaagaagta tgtcttcgcg cggcttgatc gaacggagag atgcgcacca gtcgatgtac
     1021 gcccgcttcg gctgacaaca gaccgtatgc gtattcgcct tcgactttga acgtcacgtt
     1081 tttgatgccc gcttcttctc ccggctgata gtcgatgacc tcagttcgaa atcctcgtcg
     1141 ttcagcccat ttcagataca tgcgcagcag catttcggcc caatcctgcg actcagtgcc
     1201 gcccgcgcct ggatggatgg tgcagatagc gttgcgcgcg tcgttctcgc ccgacagcag
     1261 catctcggtt tcggcttcgg cgatctcatg ctcgagccgt ttgaccagct gacgcagctc
     1321 ggtcaaagag ctttcgtctt cttccgcaaa ttcaaagagc acttgcgcgt ctgatatctc
     1381 ggtctcgaac ttctcttgcc gctggataac gcgctccagg cggcttcgtt gctgcaaaag
     1441 cttctgggcc tcttcctgat tcgaccaaaa gtcctgggcc gacgcctggg tttcgatctg
     1501 gcttagctca gtttgtttcg ccgggacatc aaagaaacct cccgagctga tcgacgcgct
     1561 tctttaagtc gtcgaatgac tctcttaatt cctgaattga aagtggatcg atcattatgt
     1621 tcggtacgca cgcctcaggc atgctcttat tacttagttg ccgagtacgc ctgaggcgtg
     1681 cgtagccttt ctcctcgtca taaacgtcgc tgagataaat cccagagtaa tcaacgcgca
     1741 gccgtagacg aacacatcgc cgtagcgcga ataaaaggtt gttccgccgc cggggctgat
     1801 cgtccaggtt cgcactgctt cctgaaaact cggcgtcgcg tcgtgcacgt gcccattcga
     1861 atcgatatag gcgccgatgc cgctgttcgt cacgcgaatc atgtcgcgat cgttttccac
     1921 cgcgcgaaag actgcattcg ccaggtgctg gcgcatcacg gccgtcggtc ccaggtagcc
     1981 atcattcgaa atattgatca gcacctcagc tcccgagttc gtgaaggcgc gcaccaaatc
     2041 agcatgggcg gcttctatac aaataaaaac cccggcacga agcgcgccga ggggcatcag
     2101 cgtatgcgaa ctgccgggcg tgaattcgcc gacgatgctt cgcaccgaac ccga
//
LOCUS       DATDBY010000293         3522 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2274684, whole genome shotgun sequence.
ACCESSION   DATDBY010000293 DATDBY010000000
VERSION     DATDBY010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3522
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2274684"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2386
                     /locus_tag="VIT19_05435"
     CDS             <1..2386
                     /locus_tag="VIT19_05435"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEY5838459.1"
                     /translation="GASDADRASVARGVALRVASGNVPVNLQGKRVFSLNLDALAKDA
                     KTPSEFNQRIHSVFAAAAATRDEIILFVDQLHQYAGARATAAATATIRSAIAANHLSV
                     IGGASSEAYDAYIGTDDQVASLFETISLDAAESAENTTGLKDKRKSPINQEFEGEKIA
                     PDMHDLMASAGPNGQVAAIVQVSDVNSRQVRALLTRYGVTVGDRMANLGAMKVDLPVE
                     AIDALMKSNSMNYISPDVKVESLGHVTATTGTDQVRNAPGLLAGLLGASAIDGKGIGI
                     AVLDSGLDSSHQAFTYGTNRIRFSKDFTGESNTTTDPYGHGTHVAGSAAAASYDDGTK
                     YQGVAPGASIINLRVLNKTGVGTVSGLLSALNWILSPVDPTKAVSSTNPLNKDKYNIR
                     IVNMSLGAPAISSYKNDPICRASRALVDAGIVVVAAAGNNGKDASGRKIYGQIHAPGN
                     EPSVITVGATNTFGTDSRIDDAVATYSSRGPTRSRWTDANEITHYDNILKPDVVAPGN
                     KLIYPESDAGSSGLLGTGLLGSVDMNYLVTKYPNLDTGVSNSENRRLMYLSGSSMATP
                     IVSGIAAMMLQVNPKLTPNMVKMILMYSAQPLRGWNTFEQGTGQVNAEGAVRLAKVVR
                     TDLSSTTLPGTPLLTVATPPDPSTTIAGHTFSWARGIIFRHWWATGTALITKYQSYYA
                     KGVVLGDGVVIGDGVVLGDGVVIGDGVVIGDGVVIGDTIFKSDGVVIGDGTMFCSGIL
                     LGDGVVIGDGVVIGDGILLGDGVVIGDGVVIGDAVWAMSRYAMVYGDPGPSMRP"
     gene            2428..3324
                     /locus_tag="VIT19_05440"
     CDS             2428..3324
                     /locus_tag="VIT19_05440"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5838460.1"
                     /translation="MAVTMTKYEASQGSPHLILGDHTCNHLQPGEEPEALRFLAERPI
                     HTVFIATLIRDNGAVSPNNRGTFYVCRNRSKKIEGIALVGHATIVEARTDQAVAAFAQ
                     LAAHSQHAYLIRGERRTVETFWQHYSEGGQQARLVCREMLFEKTEETPPFEPVADLRL
                     ATRQETEHVVAINALLASQEGGSNPLERDPEGFRARMQRRIDQQRIWIWMRDGKAIFK
                     ADIVGNTPEMIYLEGIHVHPDERKKGYGKRCLLQLSSNLARPGRSVCLTINQRRANAV
                     AFYVRAGFDYHSEYETIYLGKE"
BASE COUNT          775 a         1019 c         1018 g          710 t
ORIGIN      
        1 tggcgcctct gacgctgatc gcgcgtcggt cgcacgcggc gttgcattgc gtgtcgcgtc
       61 cggcaatgtt cccgtgaact tgcagggaaa gcgggtattc agcctgaacc tcgacgcgct
      121 tgcgaaagac gcaaagacgc ccagtgaatt caatcaacgc attcattccg ttttcgccgc
      181 tgccgcggcc acccgtgacg agatcattct cttcgtcgat cagttgcatc aatacgcggg
      241 cgcgcgggcc acggccgcag ccaccgcgac gattcgatcc gcaatagctg cgaaccatct
      301 tagcgtcatc ggtggagcca gttccgaagc ctacgacgcc tacatcggca ccgacgacca
      361 ggtcgcaagc ctttttgaaa cgatatctct tgacgcagct gaatctgctg aaaacacaac
      421 cggcctcaaa gacaagcgta agagcccaat caaccaggaa ttcgaaggcg agaagatcgc
      481 ccccgacatg cacgacctaa tggcatccgc gggaccgaat ggccaggtgg ctgcaattgt
      541 gcaggtcagt gatgtcaaca gtcgccaggt gcgcgctctg ttgacgcggt acggcgttac
      601 cgtcggtgat cgcatggcga acctcggcgc gatgaaagtc gatctgccgg tagaagcaat
      661 cgatgcgctc atgaagagca actcgatgaa ttacatctct ccggatgtga aggtggagag
      721 tcttggccac gtcactgcga cgacgggaac cgatcaagtt cgcaatgcgc cgggactact
      781 cgccggtctg ctgggcgcta gtgccatcga cggaaagggt attgggattg cggtactgga
      841 ctcaggtttg gactcaagcc accaggcatt cacctacggg acaaaccgaa tcaggttcag
      901 caaagacttt accggagaga gcaacacaac gaccgaccct tacgggcacg gtacacacgt
      961 cgccggatcg gccgccgccg cgagttacga tgacggaacc aaatatcagg gcgtggcgcc
     1021 cggcgcctca ataattaacc tgcgcgtctt gaacaagacc ggtgtcggca ctgtctcagg
     1081 attactgagc gcgctcaact ggattctcag tcctgtcgat cccacgaagg cggttagttc
     1141 gacgaatccg ctgaacaaag acaagtacaa cattcgcatc gtcaacatga gtctcggtgc
     1201 gccggcgatt agcagttaca agaacgatcc gatttgccgc gcctctcgcg cgctggttga
     1261 tgccggcatc gtcgtcgtag cggccgccgg taacaacggc aaagatgcca gtggtcgaaa
     1321 aatctatgga cagattcatg ctcccggcaa tgaaccgtcg gtaattaccg tcggcgccac
     1381 gaacacgttt ggcactgatt cgcgaataga tgacgccgtc gcgacctata gctcgcgcgg
     1441 gccgacccgg agtcgctgga cggacgccaa cgagattact cactacgaca atattctaaa
     1501 gccggacgtg gtggctcccg ggaacaagtt gatctacccc gagtccgacg ccggcagttc
     1561 aggcttgctg ggcaccggac tcctgggaag cgtggacatg aattacctcg tcaccaaata
     1621 tcccaatttg gatacgggcg tatccaatag cgagaaccgc cgattgatgt atctcagcgg
     1681 cagctcgatg gctacaccca tcgtctccgg cattgccgcc atgatgttgc aggttaatcc
     1741 gaagctcacg ccgaacatgg tcaagatgat cctgatgtat tcggcgcaac cactccgcgg
     1801 ctggaacacg ttcgagcaag gcaccggtca ggtgaatgcc gaaggcgcgg tgcgcctggc
     1861 gaaagtcgtt cgcacagatc tcagctctac aactctcccc ggaacgccgt tactgactgt
     1921 ggcgacgccg cctgacccca gcacgacgat cgcgggccac acgtttagtt gggcgcgcgg
     1981 aatcatcttt cggcactggt gggcgacggg tacggctttg attacgaagt atcagagcta
     2041 ctacgcgaag ggcgttgtcc tcggagacgg tgtcgtgatc ggagatggcg tggtcctcgg
     2101 cgatggcgtg gtcatcggcg acggtgtcgt gattggcgac ggcgtcgtca tcggtgacac
     2161 gattttcaaa agcgacggcg tcgtcatcgg tgacggcacg atgttttgca gcggcattct
     2221 gcttggtgat ggtgtcgtga tcggcgatgg cgtagttatc ggcgacggca tcctgctggg
     2281 cgatggtgtc gtgattggcg atggcgtcgt catcggcgat gcagtttggg cgatgtccag
     2341 atacgcgatg gtttacggtg atcctggtcc gtcaatgcgg ccctagctca cctcccgaca
     2401 gtccctcact gaggaaagga gtaaccaatg gctgtaacta tgactaagta tgaggcctcc
     2461 cagggttcgc ctcacttgat tctcggcgac cacacatgca atcacttgca gcctggcgag
     2521 gagcccgagg cgctgcgttt tcttgccgaa aggcccattc acacggtctt tatcgcgacc
     2581 ctgatccggg acaacggggc ggtcagcccc aataatcgcg gcacttttta cgtctgccgc
     2641 aaccggtcga aaaaaattga aggcattgcc ctcgtcggcc atgctactat cgtcgaggcg
     2701 cgcaccgatc aagcggtggc cgcctttgcc caactggctg ctcacagcca acacgcttac
     2761 ctcattcgcg gcgaacgccg caccgttgaa accttctggc agcattactc cgagggcgga
     2821 caacaggcgc gacttgtgtg ccgcgaaatg ctgttcgaaa agactgaaga gacgccgcct
     2881 tttgaacctg tcgctgactt acggctggcg acacggcaag agaccgagca cgtggttgcg
     2941 attaacgcgc tgctcgcttc gcaagaaggt ggcagcaatc cacttgaacg tgacccggag
     3001 ggctttcgcg cccgcatgca gcgacgcatc gatcaacagc gaatttggat ttggatgcgt
     3061 gatggaaaag cgatcttcaa agccgacatc gtaggcaata cgccagagat gatctacctc
     3121 gaaggaattc acgtgcaccc cgacgaacgg aaaaagggct acggcaagcg atgcttgttg
     3181 cagctctcgt caaacctcgc ccgccccggt cgatcagtct gcctcacaat caaccaacga
     3241 agggcaaacg ccgtcgcgtt ttatgtgcgc gccgggttcg attatcacag tgagtacgaa
     3301 acgatctatc tgggtaaaga ataagttcca cgaggtttcc ccgttaatga gctcgtcccc
     3361 cgtaaaagga aaaatttcca ccggcttccg ttacgccatg gtcgtctgcg gcgctgcgtc
     3421 actcgtttac gcgatgtggc gcatgccgtt gccacatctc gacgtacggt tcgtgctgtt
     3481 ggcggcgatc accatgatcg tcagctcgcg cttcgcggtg aa
//
LOCUS       DATDBY010000294         6485 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1238481, whole genome shotgun sequence.
ACCESSION   DATDBY010000294 DATDBY010000000
VERSION     DATDBY010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6485
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1238481"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1722
                     /locus_tag="VIT19_05445"
     CDS             <1..1722
                     /locus_tag="VIT19_05445"
                     /inference="COORDINATES: protein motif:HMM:NF026220.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YCF48-related protein"
                     /protein_id="HEY5838461.1"
                     /translation="RTRIVSTLSGLHVFDRRRAIAVGARGTVLRTTNGGRRWTQVPVP
                     TKDHLYSVTFASDDPKRGWAVGTYGAVVATTDGGLSWSPQLSATRAHLFSVSFTNKTV
                     GLAAGERGTVLRTTDGGKNWKESVRLGAQPLTGVTFITPKRTIAVGYGGRVLLSEDGG
                     ATWEPLDIGMKSDLLSVYFSDDKNGWIAGDNGLVLSTGNGGKLWIPANIRTNPRLVTV
                     YFADANTGWAAGGDGLVVRSDDGGLGWERLTEGGRDDIADIFFVDDSRGWAVGARGKI
                     LATSSGGKNWTLRPSGTRERLNAVTFTDAANGWVAGDGGTILRTSNGGIVWQKMETGI
                     PEDLTGLWFVSPKLGWVVGARGTIMRTEDGGETWQGQPSKSRAWLEDVTFFDAKRGVV
                     VGSGGTIMRTEDGGDSWKHIDITLKEWLYSVAFADDKTGYAVGEKGLILRTDDGGLKW
                     KDQESGVSSNLFAVSVASRDDAMAAGDHGLILATKDGGIVWASQPTITSASLFGVAYH
                     GGSDTWIAGRGGAILRRTTSLATVSLPTPKLPPVLRGSKVKIVDPEGDPDDIPRAVRP
                     QLKPQKP"
     gene            2022..5033
                     /locus_tag="VIT19_05450"
     CDS             2022..5033
                     /locus_tag="VIT19_05450"
                     /inference="COORDINATES: protein motif:HMM:NF041518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HEY5838462.1"
                     /translation="MSHSFRRTAQMGAALVAIPAGLWFPLNSKLRFPGILRPSVRAWL
                     LALTVLLGVGATVTGWRVQVSRTATTAPGSVISVNSLNNNTAAGDGFFSPLAADMSFV
                     VGNTNDGGAGSLRQAIGAANANPGNDTITFSVSGTIMVTSTLPQIVSGMGTLTIDGSG
                     QSITISRNNSVQVMVVNGGANLALLNLTISNSIGDTFPGVSAPFSGGGVENHGTLTIS
                     NSTFSGNNAIFSGGGVDNSHGTLTITNSTFFGNSAMYGGGVWNSGGTVTISNSTFSTN
                     NALGASGGGGVETTNGTLTITNSTFSHNAGIGAGAVKHDNGTVTITNSTFSDNIGVGA
                     GGVRNISGTIILKNSIVANSAGSNCAGAITDGGNNLRWPSSDTSCVGTFGDPKLAALA
                     NNGGPTQTMALQSASAAIDAGYPFFTPPPDYDQRGPGYPRVLNGRIDIGAYEFNLCEN
                     EANGTSCNDGNSCTPTDTCQSGMCTGSNPSADGTSCNDGNACSQTDTCQGGMCTASNP
                     VVCTASDQCRVAGTCDPANGLCSNPPAPAGTSCNGTAGQCQFQDKCNGSGTCVDQGFW
                     QEDERCNDGNACTRTDECSSGVCRGSNPVICTALDQCHEVGACDPANGTCANPAKANG
                     SLCVDGNNCTQNDVCTGGSCAGTSAADQACDTGQLGICAAGSNQCQNEGIVCVQNQQP
                     QAETCNGVDDDCDGQVDEGIPSQATSCGVGACARSGERSCVGGQFIDSCTPGAPSADV
                     CNGVDDDCDGQVDEDIPSQPTQCGSGDCAGTGQLTCVNGQLVDSCTPKSNGTSCSDGN
                     ACTANDTCNNGQCASGLPPNCDDGNFCTTDSCNSASGCVHAPICTNPVQTRFVIGDRN
                     AVVGNRVMFWGAQWASQNSLTGGKAPAAFKGHAPSTTPAVPSCGGRWQTNTGNNSGRP
                     PNVPAYIIVMVASRITQLGSTISGNVPGMVVVQTDPGYDTNPGHPGTGTVVAVVCQGS
                     MAELTAPSSESNFWFDLYWAIPIRIGSWFGV"
     gene            5147..5449
                     /locus_tag="VIT19_05455"
     CDS             5147..5449
                     /locus_tag="VIT19_05455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838463.1"
                     /translation="MPNGINNSDKIRLGILIGVVLLIALASLNVYETRRQRIELNDQM
                     TQLAKTINTRPAANPAQPPRPSGPDPDKVYTVKTEGAPIEGSKSAPIQIIEISDFQ"
     gene            5462..5926
                     /locus_tag="VIT19_05460"
                     /pseudo
     CDS             5462..5926
                     /locus_tag="VIT19_05460"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
     gene            complement(5973..>6485)
                     /locus_tag="VIT19_05465"
     CDS             complement(5973..>6485)
                     /locus_tag="VIT19_05465"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5838464.1"
                     /translation="LAELHRGQVKVDSKGVGQGTTFTVTVPLYETGHRVAMPNAVTAP
                     ELLKGKSILIVDDSRDTIDMLTKLLTLEGARVESAGSGKEALQLAGERSFDLIISDIS
                     MPEMDGYQLLKQIRRLASGENLPALALTGYGRSHDIKRAQAEGFADHLTKPIDINRFL
                     RTVQRLTDGP"
BASE COUNT         1403 a         1851 c         1934 g         1297 t
ORIGIN      
        1 cggacacgca ttgtttcgac gctgagcgga ctgcacgttt tcgatcgccg ccgggcaatt
       61 gcggtcggcg cgcgcggcac tgtgctgcgc accacgaacg gtggcaggcg ttggacgcag
      121 gttccggtgc ctacgaagga ccatctgtac tcagtgacct tcgcgtctga cgatccgaag
      181 cgcggctggg ccgtcggaac ctacggcgcc gtggtcgcga cgacagatgg aggtttgagc
      241 tggtcgccac agctcagtgc gacgcgcgcg cacctctttt cggtttcatt cactaacaag
      301 accgtcgggt tggcggccgg tgaacgcggc acagtactgc ggacgaccga cggcggcaag
      361 aattggaaag agtccgtgcg gctcggcgcg caacctttga ccggcgttac cttcatcact
      421 cctaagcgaa ccatcgctgt cggttacggc ggtcgcgtgc tgttgagtga ggacggcggc
      481 gcgacatggg agcctttgga catcggcatg aagagtgatc tcctgtcggt ctatttttct
      541 gatgataaga acggttggat cgccggtgac aacggcctgg tgctgagtac cggtaacggt
      601 ggaaagcttt ggattccggc gaacatccgc acgaacccgc gactggtgac agtttatttt
      661 gcggacgcga acaccggatg ggccgccggt ggcgacgggc tggtcgtgcg cagcgatgat
      721 ggtggactgg gttgggagcg cctgaccgaa ggcggacgcg acgacatcgc ggacattttc
      781 tttgtggacg actcgcgcgg ctgggccgtc ggggcgcgcg gaaaaattct ggcgacttcg
      841 tcaggcggaa agaactggac attacgaccg tcgggaacac gcgagcggct gaacgcggtt
      901 actttcactg acgcggccaa cggttgggtc gccggcgatg gcggcacaat tctgcgaacg
      961 tcgaatggcg gcatcgtctg gcagaaaatg gaaaccggaa tcccggaaga cctcaccggc
     1021 ctctggttcg tttcaccgaa acttggttgg gtagtcgggg cgcgcggcac gatcatgcgc
     1081 accgaagacg gcggcgaaac gtggcaaggg cagccgtcga agagccgggc ctggctggaa
     1141 gacgtgactt tctttgacgc gaaacgtgga gttgtcgtcg gctcaggcgg cacgatcatg
     1201 cgcactgaag acggcggcga ctcctggaag cacatcgata tcaccttgaa agagtggctg
     1261 tactcagtcg cgttcgccga tgacaaaacc ggctatgcgg tgggcgaaaa aggactcatc
     1321 ctgcgcactg atgacggcgg tttgaagtgg aaagatcagg agagcggcgt ctcgagcaac
     1381 ctgttcgccg tctcagtcgc gtcgcgcgac gacgcgatgg ccgccggcga tcacggtctc
     1441 atactggcga caaaagacgg cggcatcgtg tgggcttcgc aaccgaccat taccagcgcc
     1501 tcattgttcg gcgtggcgta tcacggcggc tcggacacct ggattgcggg ccgcggcggg
     1561 gcgatcctgc gacgcacgac ttcactggca acggttagtc ttcccacgcc caagttaccg
     1621 cccgtgctgc gcgggtccaa agtgaagatt gtagatccgg agggagatcc cgacgatatt
     1681 cctcgcgcgg tcagaccgca gttgaaaccg cagaagcctt agttatcgcg attagtgggt
     1741 acttgcgatg ctcccaaagg ttgaatcggc atccacaatt tccgagcaac tgttgacagc
     1801 gaacggcgat cagagtaaac ctcctcagca taacttccag ggtcttcctt cttagaggcc
     1861 cggttctgtt ctagcaatcc ctcaacgcac ctaaaggttg agtcaatctc caaaagagac
     1921 gagccagtgt gcggcatctc gcctctactt ttttattctg tacgaagtgg acagagttca
     1981 gtctgcgcca ccaccgcgtg ctagtcacaa ggaggccccc gatgtcgcat tcgttccgcc
     2041 gtacggccca aatgggagct gcactcgttg ccatccctgc cggactttgg ttcccactta
     2101 actccaagct tcgttttccg ggaatcttgc gcccgtctgt ccgcgcgtgg ctgctggcgt
     2161 tgactgtctt gcttggtgtg ggcgcgacag ttaccggctg gcgtgttcaa gtgagccgca
     2221 ccgccacgac cgctccaggt tccgtcatca gcgtcaacag tctgaacaac aatacagcgg
     2281 cgggcgacgg gtttttctcg ccgctcgcag cagacatgag cttcgtggtg ggaaacacga
     2341 acgacggcgg ggctggctcg ctgcgccagg cgattggggc tgctaacgcg aatcccggca
     2401 acgacacgat caccttcagc gtgagcggca cgatcatggt cacttcgacc ctgccgcaga
     2461 tcgtcagcgg gatgggtact ttgacgattg acggcagcgg gcagagcatc accatcagcc
     2521 ggaataattc cgtgcaggtg atggttgtca acggcggcgc gaatctcgcg ctgctaaacc
     2581 tgaccattag caacagcatc ggcgacacct ttcccggcgt cagcgcgccg ttcagcgggg
     2641 gtggcgtcga gaatcatggc accctgacta tcagtaacag cacctttagc ggcaacaatg
     2701 cgatatttag cggcggcggg gtcgacaaca gccatggcac gctgaccatc accaacagta
     2761 cctttttcgg caacagtgcg atgtacggtg gcggcgtctg gaacagtggc ggcacggtga
     2821 ccatcagcaa cagcacgttc tcaaccaaca acgcgttagg cgccagcggc ggcggtgggg
     2881 tcgagactac taatggcacg ctaacgatca ccaacagcac cttctcacac aacgccggga
     2941 ttggcgccgg cgccgtcaaa cacgacaatg gcacggtaac catcactaac agcaccttct
     3001 cagacaacat cggggtcggt gccggcggcg tcaggaacat aagcggcaca ataattttga
     3061 agaattcgat tgtcgcgaac agcgccggca gcaattgcgc tggcgcgatc accgacgggg
     3121 gaaacaattt gcggtggccc tcgtcggata ccagttgtgt tggcacgttc ggcgatccca
     3181 aactcgccgc gctcgctaac aacggcggac cgacgcagac aatggcctta cagtctgcca
     3241 gcgccgcgat tgatgcgggt tatccgttct ttacgccacc gcctgattat gatcagcgcg
     3301 gacccggtta ccctcgcgta ctgaacggtc gcattgatat cggcgcttat gagttcaatc
     3361 tttgcgagaa cgaagccaat ggcacttcct gcaatgacgg caattcctgc actccaactg
     3421 acacttgcca gagcgggatg tgtactggat cgaatccgtc agccgatggc acttcctgca
     3481 atgacggcaa tgcttgcagc caaactgaca cttgtcaggg cgggatgtgt actgcttcaa
     3541 atccggtcgt ctgcactgcc agtgaccagt gtcgtgtagc aggcacctgc gatccggcga
     3601 acggactgtg cagtaatccg ccagcgccgg ccgggacgag ttgcaacggc acagccggac
     3661 aatgtcaatt ccaggataag tgcaacggta gcggcacgtg cgtggaccag ggcttctggc
     3721 aggaggacga acggtgcaat gacggcaacg cctgtactcg aaccgatgaa tgttcgagcg
     3781 gagtgtgccg gggatcgaat ccagttatct gtacggcgct cgaccagtgt catgaagtcg
     3841 gcgcgtgcga tccggcaaat ggaacttgtg ccaatccggc gaaggcaaac ggcagtctat
     3901 gtgttgatgg aaacaactgt actcaaaatg atgtctgcac cggcggcagt tgcgcgggca
     3961 cgtctgcggc agaccaagcg tgcgacaccg gtcagcttgg aatttgcgcg gccggcagta
     4021 atcaatgtca gaacgaaggg atcgtctgcg tgcagaacca gcagccgcag gccgagactt
     4081 gcaatggcgt agatgacgat tgcgacggtc aggtcgatga agggattcct tcgcaggcga
     4141 ccagttgtgg cgtgggcgcg tgcgcccgca gcggcgaaag gagctgcgtt ggcgggcaat
     4201 tcatagatag ctgcacaccc ggagccccgt cagccgacgt ctgcaatggc gtcgatgacg
     4261 attgcgacgg tcaagtcgat gaagatatcc cgtcacagcc gacgcaatgc ggcagcggtg
     4321 attgcgccgg caccggccag ctaacctgtg tcaatggcca gctcgtggat agttgcacgc
     4381 cgaaatcaaa cgggacttcg tgttccgatg gcaacgcctg caccgccaac gacacatgta
     4441 acaacggtca atgcgcgtcc ggcctgccac cgaattgtga tgatggcaat ttctgcacga
     4501 ctgactcatg caattcggca agtggttgtg tccacgcgcc catctgcacc aatccggttc
     4561 agacgaggtt tgtgatcggt gaccgcaatg cagtagtcgg aaaccgcgtc atgttctggg
     4621 gcgcgcaatg ggcgagtcag aattcactta ctggtgggaa ggctcctgcg gccttcaaag
     4681 gtcacgcgcc ctcaacaacc ccagccgtgc cgagttgcgg aggccgttgg cagactaata
     4741 ccggtaacaa ctccgggcga ccgccgaacg ttccggcata catcatcgtg atggtggcga
     4801 gccgaatcac tcaattggga tcgaccatct ccggcaatgt gccagggatg gtcgtagtgc
     4861 aaaccgatcc tggttatgac accaacccgg gccatcctgg aacgggaaca gtcgtcgcgg
     4921 tggtttgcca ggggagcatg gccgaactga cggcaccttc gagcgaaagt aatttctggt
     4981 tcgacctata ctgggcgatt ccaatacgca ttggttcgtg gttcggtgtg tagccgatga
     5041 ggctcctcaa ctggtcaccg cgaagagcgg cgctgcaccg cgccgctctt cacataatat
     5101 ccactgatgc taagatcctt aacgtttcca ggagggatgc atacaaatgc ctaacggcat
     5161 caataactca gataagattc gactcggaat cttgattggc gtcgtgctgt tgattgcgct
     5221 tgcaagtctg aatgtttacg agactcgccg ccaacgtatc gagcttaacg atcagatgac
     5281 gcagttggcg aagaccatta acacgcgacc ggcggctaat cccgctcaac ccccgcgacc
     5341 tagtgggcct gatcctgata aggtctatac ggtaaaaacc gaaggtgcgc ctatcgaagg
     5401 ttcgaagtcc gcgccaatac agatcatcga gatctcggat ttccaatgac cgttctgctc
     5461 gagggtcggt ccgaccctca aacaagttca agcggtttac aaagacaaag tggccatcgt
     5521 ctggatgcat ctgccgctca ccagcattca tcagtacgcg atgggcgcgg ccatcgcttc
     5581 tgaagccgca cacaaccaga gtaaattttg gcagtatcac gataagctgt ttgcgaatca
     5641 gaagaagctc gcgcctgatg atttgaagca gtacgcgaag gacttgggac ttgatatgtc
     5701 aaagttcgag gcggatctgg cgaacccgtc tatcaaacaa aaaatctccg ccgacatgca
     5761 ggaggctaac aacatcggca tcactggcac accggcgttc ttagttaatg gtcgctatct
     5821 cagcggcgca cagccgtttg aaggattcgc gagagtcatc aatgccgagc tgatccgact
     5881 caagctacct atcccgccaa ccccgccacc gacacccacg aaatagccga caatttcccg
     5941 ccggcgctct aacattcgcg gttagcctca tttcacgggc cgtccgtcaa tctttgcacc
     6001 gtccgcagaa atcgattgat gtctatcggc ttagtcagat gatcggcgaa gccttcggct
     6061 tgggccctct tgatgtcgtg ggaacgaccg taaccggtca aggccagggc cggcagattc
     6121 tcgccactag ccagtctccg gatttgcttc agcaactgat aaccatccat ttccggcatc
     6181 gagatgtccg agatgatcaa atcaaagctg cgctcgccgg cgagttgcag cgcttccttg
     6241 ccgctaccgg ctgattcgac gcgggcgcct tccagggtca ggagtttggt caacatgtcg
     6301 atcgtgtcgc gcgagtcatc cacaatcaag atcgatttgc ccttgaggag ttcgggtgcg
     6361 gtcacagcgt tcggcatcgc cacccggtgc cctgtttcat acagcggaac ggtcacggta
     6421 aacgttgtcc cctgaccgac gccttttgaa tcgactttca cctggccgcg atgtaattcg
     6481 gcaag
//
LOCUS       DATDBY010000295         2144 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2968151, whole genome shotgun sequence.
ACCESSION   DATDBY010000295 DATDBY010000000
VERSION     DATDBY010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2968151"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1036
                     /locus_tag="VIT19_05470"
     CDS             <1..1036
                     /locus_tag="VIT19_05470"
                     /inference="COORDINATES: protein motif:HMM:NF012550.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HEY5838465.1"
                     /translation="KLYGENPDGGSEAICHNAVVEDLALPGQIVIGTDSHTCMAGVLG
                     CFAFGVGSTDMANAWYTKDIRIRVPETVKYVLTGKKRADVTAKDVMLYILATDYMKTS
                     QGIGKVLEFAGEDLMNWPMDERATLTNMSVEAGGTTGIIEPDEATLAYIVTMRGLDAE
                     TVREGFVYSDPDAEYAAVFEIDLDEIRPMVALPGDPRNGIPIDELAEEVRIDAAYGGS
                     CTGGKMADMDMYATVLQHALEQGKQVAPGVHLYLQFGSQKIKQYARSKGYIEIFEKAG
                     AEMIDPSCGACINAGPGASPSAETVTVSAQNRNFPGRSGPGKLYLASPYVVAASAIAG
                     KIVEPDEFLH"
     gene            complement(1124..>2144)
                     /locus_tag="VIT19_05475"
     CDS             complement(1124..>2144)
                     /locus_tag="VIT19_05475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838466.1"
                     /translation="EESNMTDDPAPVVIQKSNRTTVITIASISALFVLFVAVLWAVGF
                     FTFSGSDPSSKVVAAALALVGGLVAAVVSIIGIVLKYSIDQRTETRLQIEATRAAADR
                     KAESDRASALQTQAEQRLNLEAAIRAVELLGTKDGADTALQRAGALFALSSLDQHSLT
                     LDLAAYLLEKKTLEPAMACSLIDAALTRGDEAVKRHAVELLYDNAERMITELDTSAPR
                     SILNWDNSLNSEYVRELAVLAMGRILLARPFQVWQSQFDGELCSVLAALALAWQAESN
                     DRLKRDTAAILEATLAGRLTGEIYHPKKNINLDEINARVKGSFAVTGRAARIVARIRI
                     WVSAE"
BASE COUNT          486 a          591 c          605 g          462 t
ORIGIN      
        1 caagctttac ggcgagaatc ccgacggagg atcggaagca atctgtcaca acgcagtggt
       61 tgaggatctc gctttgccgg gccagatcgt gattggcacc gactcgcaca cttgcatggc
      121 aggcgtgctc ggctgcttcg cattcggggt cggctcaacc gacatggcga acgcctggta
      181 cacgaaagac attcgcattc gcgtgcccga aaccgttaag tacgttctga caggaaagaa
      241 gcgggcggac gtcaccgcga aagacgtgat gctgtacatc ctcgcgaccg actacatgaa
      301 aacgagtcag ggcatcggta aggtcctgga attcgcgggc gaagatttga tgaactggcc
      361 gatggatgag cgcgcgacgt tgacgaacat gtcggtcgaa gccggcggta caaccggcat
      421 cattgaaccc gacgaagcga cgctggccta catcgtcact atgcgcggcc tggatgcgga
      481 aaccgtccgc gaaggatttg tttacagcga ccctgatgct gagtacgcgg ccgtgttcga
      541 gatcgattta gacgagattc ggccgatggt ggctttgccg ggcgatcctc gtaacggaat
      601 tccgattgac gagctggcgg aagaagtgcg catcgatgcc gcatacggtg ggagttgcac
      661 cggcggcaag atggccgaca tggacatgta cgcaacggtc ttacagcacg cgcttgagca
      721 gggtaaacaa gtcgcgcccg gcgttcatct ttacctgcaa tttggatcgc agaagatcaa
      781 gcagtacgcc cgtagcaagg ggtacataga aatatttgaa aaggcgggtg cggaaatgat
      841 cgatccgtct tgcggcgcgt gcatcaatgc cggccccggc gcttcacctt cggctgaaac
      901 cgttaccgtc agcgcgcaaa accgcaactt tcccggccgc agtggccccg gaaaactcta
      961 cctcgcgtca ccttatgtgg tagcggcttc ggcgattgcg ggaaagattg ttgagccgga
     1021 cgaattttta cactgaaacg ttaaccgaat tgcagggaag ggaaaccctt tgtgcagtca
     1081 ccctcgctgc cgcgacgtag ctctgcccgg taagaagggt ttgtcattca gccgaaaccc
     1141 aaatccgaat tcgtgcgacg attctcgccg cccgaccagt aacggcaaaa cttcctttca
     1201 ctcttgcatt tatctcgtcc aggttgatgt tcttttttgg gtggtaaatc tcgcctgtca
     1261 atctaccagc tagtgttgcc tccagaattg cggctgtgtc gcgctttagg cgatcgttcg
     1321 attccgcttg ccacgccaac gccaaggccg cgagcacgct gcacagttcg ccatcaaatt
     1381 gtgattgcca gacctggaac ggccgtgcca gcaagattct gcccatcgcc agtactgcca
     1441 attcgcgcac gtattcagaa ttcagagaat tatcccagtt caagatagag cgaggtgcgc
     1501 tggtgtctaa ttcggtaatc attcgctccg cgttgtcgta gagcagttcc acagcgtggc
     1561 gttttacggc ttcgtcgcct ctagtcagag cagcatcgat caaagaacaa gccatggccg
     1621 gctccaacgt cttcttttcc agaaggtagg cagcgaggtc gagagttaga ctgtgctggt
     1681 ccaagcttga aagcgcgaac aacgcgcctg cgcgctgcaa cgcggtgtca gccccgtctt
     1741 tagtcccaag caactcaacc gcccgtatcg cggcttcaag atttagtcgt tgctccgcct
     1801 gcgtttgcaa cgcgcttgcg cgatcggatt cggctttgcg atcggccgcc gcgcgagtag
     1861 cttcgatctg gagccgggtt tcagttcgct gatcaatcga gtacttgagg acaataccta
     1921 ttatcgacac aactgcggca actaacccgc ctacaagtgc aagggccgct gcaacgactt
     1981 tggagcttgg gtctgatccg ctaaatgtaa aaaatccgac ggcccataac acggccacga
     2041 acaggacaaa aagcgcagaa attgaagcga tcgtgataac ggtcgttcgg ttcgatttct
     2101 gaataacaac cggcgcggga tcgtcggtca tgttggattc ctcc
//
LOCUS       DATDBY010000296         2725 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2682906, whole genome shotgun sequence.
ACCESSION   DATDBY010000296 DATDBY010000000
VERSION     DATDBY010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2725
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2682906"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            207..2078
                     /locus_tag="VIT19_05480"
     CDS             207..2078
                     /locus_tag="VIT19_05480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838467.1"
                     /translation="MKITKQIASLFVLTAVVISAFSLAGAQEKTTAVSFKTLGGHTIL
                     PVGDLRPGMKGVAHTVFTGSASEEFGVEIIGVLPSFNGPRQSLIIGKLSGANVAKTGV
                     FAGMSGSPVYVDNRLVGAIAYSFPFSKEPICGITPIEQMIDIFEAGSPKIARRPRPVS
                     FAQLARTDWKPALPKQEISSGPLMAGVSAGSPLAPFIGQQIQRIATPVVFSGISQESL
                     SLFSNELTSRGLLPVAGVGGGAAITPLAAFNEKTLAPGASVSVQLVRGDLSIAASGTV
                     TSRDGERIYAFGHPFLSLGGSDMPMAESSVVTVIPNTYNSFKLAVPGPMVGTISQDRA
                     TGIYGKLGRAPKMIPIKINLHTSRNQNQQFAFEIVNDEFLTPLLLMITVFNSINAQER
                     SMGQATLSLRGSIAVEGQKPIELERRFAAQNATMLAASSIAGPVAELLSSGFENVALK
                     GVNLEIWASEETNVASLERLSLDRTEVASGETVEVQAYIRTDAGRQFVQRIPVQIPAD
                     AASGPLMITVGDGASLQEASAARQFVPLNLDQLVSAINKVKKNDRLYLRVQRPAPGVV
                     IGTNEMPNLPPSSVATLNSERSSGGYTPMSVSQLYERELAPAEFVITGQQTITVTIK"
     gene            complement(2159..>2725)
                     /locus_tag="VIT19_05485"
     CDS             complement(2159..>2725)
                     /locus_tag="VIT19_05485"
                     /inference="COORDINATES: protein motif:HMM:TIGR02595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HEY5838468.1"
                     /translation="VPAVKADPLSISADGFTINNLGNDGSVPNGLDTLIGASSTRPFT
                     FDGPGSFVARVNDLTFSMGFTGVDSPGSYDFNFSQLITINGQSQMMNIFGTIDIGMVT
                     DTVRLLHADALTFAFDTFTVDVRMLPVEISGTDVGEFCGFLKARITITENCAPVPEPA
                     TLTLLGLGLAGTAAKIRQRRKKAQLQQS"
BASE COUNT          563 a          781 c          793 g          588 t
ORIGIN      
        1 ataactcgcc ggctattcgc tcaagcagcg tttgcgagcc gagccgcatt tgcgccttat
       61 cctgacccat tcgtcgagag gcgccgccaa ccagaatgaa cccttggaca tcgaacatga
      121 gcgtcaaata acctgatgct attactttca atcgatttgg gctatattcc gttcacagcg
      181 cttcccggtc gtcgcgcatc agcattatga aaatcactaa acaaatcgct tcgttgttcg
      241 tcctcaccgc cgtcgttatc agcgcgtttt cccttgcggg tgcgcaggag aagaccactg
      301 ccgtgtcttt caagaccctc ggcggtcaca cgattctgcc ggttggggat ctgcggccgg
      361 gaatgaaggg cgtcgcgcac acggtgttta ccggcagcgc atccgaagag tttggagtcg
      421 aaattatcgg cgtgttgccg agtttcaacg gcccgcgcca gtcgctgatc atcggcaaac
      481 tcagcggagc gaacgtcgct aagaccggcg tcttcgcagg catgtccggt tcgcctgttt
      541 acgttgataa ccgtttagta ggcgcaattg cctacagctt tccattctcg aaagaaccca
      601 tctgcggcat aaccccgatc gagcagatga tcgacatttt cgaggccggc tcgccgaaaa
      661 ttgcgcgccg cccgcggccc gtgtcgttcg cgcaattagc gcgcactgat tggaagccgg
      721 cattgcctaa acaagaaatt tccagtggcc cgttgatggc cggtgtctca gccgggtcgc
      781 cgctcgcccc gttcatcggc cagcagattc agcggattgc cacgccggtt gttttcagtg
      841 gcatctctca ggagagcctg tcgctctttt cgaatgaatt aaccagccgg ggcttgttgc
      901 ccgttgccgg tgtgggcggc ggcgcggcaa ttacgccgct ggctgcgttc aacgaaaaga
      961 ctttggcgcc aggcgcgtcc gtcagtgttc agctcgtgcg cggcgatctt tctatcgcgg
     1021 cttcgggcac cgtcacgtcg cgggacggcg agcgcatcta tgccttcggt catccgtttc
     1081 tgagcctggg cggctctgac atgccgatgg ccgagagttc agttgtcacg gtgattccga
     1141 acacttacaa ctctttcaaa ctggcggttc ccggcccgat ggtgggaacg atttcgcagg
     1201 atcgggcgac cggaatttac ggcaagctgg gccgcgcgcc aaagatgatt ccgatcaaaa
     1261 tcaacctcca caccagccgc aatcagaatc agcagtttgc ctttgaaatt gttaacgatg
     1321 aatttctgac accgctgctt ttgatgatca cagtcttcaa cagcattaac gcgcaagagc
     1381 gttcgatggg gcaagcgacc ctctctttgc gcggctcaat cgccgtggaa ggacaaaagc
     1441 cgatcgagtt ggaacgtcgt tttgccgcgc agaacgcgac catgctggcg gccagctcaa
     1501 ttgcgggccc ggttgccgaa cttctcagca gcggcttcga aaatgtcgcg ctgaagggag
     1561 ttaatctgga gatttgggcg agtgaagaga caaacgtcgc atcgctcgaa cggctgtcgc
     1621 tggatcgaac cgaagtcgcg agcggcgaaa ctgttgaagt tcaagcctac atccgcacag
     1681 atgccggacg tcaattcgtg caacgcattc cggtgcagat tcccgcggat gctgcgtcag
     1741 gtccgctaat gattaccgtt ggcgacggcg ccagtttgca ggaggcttcc gccgcccgtc
     1801 agtttgttcc gttgaatctt gatcagttgg tttccgcgat aaacaaggtg aagaagaacg
     1861 atcgacttta cctgcgcgtc cagcgccctg cgcccggcgt cgtgatcggc acgaacgaaa
     1921 tgccgaatct tccgccgtcg tccgtagcta cactaaacag tgaacgcagt tcgggtgggt
     1981 acacgccgat gtctgtctcg cagctgtacg agcgggaatt ggcgccggct gagttcgtga
     2041 tcaccggtca gcagacaatc acagttacaa ttaaatagat gaggcgctgg gagcgcgggc
     2101 aagcggggtc cccggccggg cagcccggct ggcgtgctcg tcctgaccgc atctcgcgct
     2161 aggactgctg aagttgcgct tttttgcggc gttgccggat cttggcggct gttccagcca
     2221 gcccgaggcc taacagggtc agcgttgcgg gctcaggcac gggcgcgcaa ttctccgtaa
     2281 tcgtaatgcg cgctttcagg aagccgcaga actcaccaac gtcagttccg gaaatctcca
     2341 ccggcagcat gcgcacatcg acggtgaacg tgtcgaacgc gaacgtcagc gcatcggcat
     2401 gaagcagtcg cactgtgtcg gtcaccatgc cgatatcgat cgtgccgaag atgttcatca
     2461 tctgagactg gccgttgatg gtaatcagtt gtgagaaatt gaaatcgtag gagccgggag
     2521 aatcgactcc cgtaaagccc atcgagaagg tgaggtcgtt caccctggcg acaaaactgc
     2581 cggggccgtc gaaggtaaat gggcgcgtcg acgatgcgcc aatcaaagtg tccaggccat
     2641 tcggcacgga accgtcgtta ccgaggttat tgatcgtaaa gccgtccgca ctaatcgaca
     2701 gcgggtcggc ctttaccgcc ggaac
//
LOCUS       DATDBY010000297         2194 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_467967, whole genome shotgun sequence.
ACCESSION   DATDBY010000297 DATDBY010000000
VERSION     DATDBY010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_467967"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VIT19_05490"
     CDS             <1..411
                     /locus_tag="VIT19_05490"
                     /inference="COORDINATES: protein motif:HMM:NF012360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DapH/DapD/GlmU-related protein"
                     /protein_id="HEY5838469.1"
                     /translation="ILDSQIADNCAVGPFAHLRMNAQMEERSVVGNFVEVKKSRIGRG
                     TKSMHLTYLGDATIGEETNIGAGTITCNYDGKNKHQTIIEDHVHIGSDTMLIAPVRVG
                     SGASTGAGSVVTKDVPPNTLVAGVPAKVKRKLDK"
     gene            486..>2194
                     /gene="glmS"
                     /locus_tag="VIT19_05495"
     CDS             486..>2194
                     /gene="glmS"
                     /locus_tag="VIT19_05495"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: protein motif:HMM:NF001484.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEY5838470.1"
                     /translation="MCGIVGYVGNKPVVPLIIDGLRKLEYRGYDSAGIAVVNGNNELQ
                     IRRAEGKLRNLEAALQQNPLNGTYGVGHTRWATHGRPTEENAHPHRDCTGRVIVVHNG
                     IIENYLKLKEELRQKDHEFVTETDTEIVAHLIEEYLKQGADFEKAVRETVLRLTGIFA
                     LSIISADYPNTIISARQGPPVVMGLGDGEFFVASDVPAILEHTRDVFFLADGEIAVMT
                     KDGIRVSDFSGKEVQPEQQRITWDPIQVEKGGFKHFMLKEIYEQPRAVRETVEGRISH
                     ATGRVFLDEMRNISEDEFKNFNSIKIAACGTSLHAGLAGKYMIEQLARVNVDVDYASE
                     FRYRDPVLDENTLMLVITQSGETADTIAALREVKERGVKVLSICNVQGSMITREADGT
                     ILTHAGPEIGVASTKAFTSQMIALYLFALYLGQLRGTLSDEQSLEHVRQLAELPVKME
                     HLLNQSDAIDELSREFFRATDFLYLGRGINFPIALEGALKLKEISYIHAEGYPAGEMK
                     HGPNALIDERLPVMFINTRETGNRSSELRYEKTHSNIVEVKAREGIVLSVLTEGDTMS
                     SVVS"
BASE COUNT          522 a          600 c          616 g          456 t
ORIGIN      
        1 atcctggact cgcagatcgc cgataactgc gctgtcggac cgtttgctca cttgcggatg
       61 aatgctcaga tggaagaacg ttccgtcgtc ggcaacttcg tcgaagtgaa gaaatcgcgt
      121 attggtcgcg ggacgaaaag catgcatctg acttatcttg gcgatgcgac gattggtgaa
      181 gaaacgaaca ttggggccgg caccattacg tgtaattacg acgggaaaaa caagcaccag
      241 acgataattg aagaccacgt acacatcggc tcagatacaa tgctgatcgc gccggtgcga
      301 gtcggcagcg gcgcctcgac cggcgccggt tcggttgtga cgaaagatgt gccgccgaat
      361 acgctcgtcg ccggtgtgcc ggcaaaagtg aaacgaaaac tcgacaagta agcaggatca
      421 tgaaaagcca ctgcgcttcg ctcttttttt ctgcttacta actactgctt actacctact
      481 gccttatgtg tggaatagtc ggatacgttg gaaacaaacc ggtggtgccg ttgatcatcg
      541 atggcctgcg gaagctcgaa taccgtggct atgactcggc gggcatcgcc gtcgttaacg
      601 gcaataatga actgcaaatt cgccgcgccg aaggaaagct ccgcaatctt gaggcggctt
      661 tgcagcagaa tccgcttaac ggcacctatg gagttggcca tacgcgctgg gcgacacacg
      721 gccgccccac cgaagagaac gcccatccac atcgcgactg cactggtcgc gtgatcgtcg
      781 ttcacaacgg catcatcgag aattatctaa aactgaaaga agaactccgg cagaaggatc
      841 acgagttcgt taccgaaact gacaccgaga tcgttgcgca cctgatcgaa gagtatttga
      901 agcagggcgc tgatttcgag aaggcagtgc gcgagaccgt tctgcgtctc acggggatct
      961 ttgcgctctc gatcatctca gccgattacc cgaatacgat tatttccgcg cgtcagggtc
     1021 cgcccgtggt catgggtctg ggtgacggcg aattcttcgt agcgtccgac gttccggcga
     1081 ttctcgagca cacgcgcgat gtgtttttcc tggccgacgg cgagatcgcc gtcatgacaa
     1141 aggacggcat tcgcgtcagc gatttcagcg gcaaggaagt tcagcctgaa cagcagcgca
     1201 tcacgtggga tccgattcag gttgaaaagg gcggcttcaa gcatttcatg ctcaaggaga
     1261 tctacgagca gccccgcgcg gtgcgtgaaa cggtcgaagg acgaatctca cacgcgactg
     1321 gccgcgtctt cctcgacgaa atgcgaaata tcagcgagga cgagttcaag aatttcaatt
     1381 cgatcaagat cgcagcctgc ggaacttcct tgcacgccgg cctcgccggc aagtacatga
     1441 ttgagcagct ggcgcgcgtc aacgttgacg tcgattacgc gtcggagttc cgttaccggg
     1501 atcccgtgct cgacgaaaac actttaatgc tggtgattac gcagtcaggc gaaacggcgg
     1561 atacgatcgc cgctttgcgc gaagtgaaag aacgcggcgt caaagttctc tcaatctgca
     1621 acgtgcaagg ctcgatgatc acgcgcgaag ccgacggcac aatccttacg cacgccggcc
     1681 ctgaaatcgg cgtcgcttcg acgaaggctt ttacgtcaca aatgattgcg ctctatctgt
     1741 ttgcgctgta cctcggccaa ctgcgcggaa cattgagcga tgaacaaagt ctcgaacatg
     1801 tgcgtcagct agccgaactg ccggtgaaaa tggagcacct gctgaatcag tcggacgcga
     1861 ttgacgagct gtcacgcgag ttcttccgcg ccacggattt cctttacctc ggccgcggca
     1921 tcaattttcc gatcgcgctc gaaggcgcgc tgaaactaaa agagatctcc tacattcacg
     1981 ctgaaggcta tccggccggg gaaatgaagc acgggcctaa cgctctgatt gacgagcgtc
     2041 tgcccgtgat gttcatcaac acgcgggaaa ccggcaatcg ttcttccgag ctccgctacg
     2101 agaagacgca ttcgaacatc gtggaagtaa aagcgcgtga aggtatcgtg ctttccgtcc
     2161 tgaccgaagg cgacacgatg tcctcggtcg tttc
//
LOCUS       DATDBY010000298         2326 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_424025, whole genome shotgun sequence.
ACCESSION   DATDBY010000298 DATDBY010000000
VERSION     DATDBY010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2326
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424025"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..695
                     /locus_tag="VIT19_05500"
     CDS             <1..695
                     /locus_tag="VIT19_05500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838471.1"
                     /translation="SYNWIKDAAEKGLDSTRFIWYVQKMATPDKENSELQFLSERRKI
                     PNPYIIAIPPKQTAKKGDIVLTWWQTGSGMQRAIVVDDTDASAPVVRYLDIDYNNPAK
                     SRDGSTTIGKMDEKILPDTFIKLKDWDAGTIITVQDGANLKKAHVIRVAGDRVLALEN
                     GKLQIYSKASCRPVPLVPNVKEGDRVKAPRYGMNFASATVSSVDTRNGRVFVRFDGDN
                     KDEAIAFGGVLK"
     gene            839..1252
                     /locus_tag="VIT19_05505"
     CDS             839..1252
                     /locus_tag="VIT19_05505"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEY5838472.1"
                     /translation="MPEAKAKVGSEIHERLCRARAFINERYHEPIDLDEISREACLSR
                     YHFLRLFREEFATTPHQYLIDRRIEKAKELLRHRRLTVTDVCFEVGFQSLGSFSTLFR
                     QRVGDAPVNYRQQQREAQSKVPTCFLDMYGLGVKD"
     gene            1533..1952
                     /locus_tag="VIT19_05510"
     CDS             1533..1952
                     /locus_tag="VIT19_05510"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5838473.1"
                     /translation="MITRMSHATVWVRNQQEALEFYRDKLGFEVDTDAMVGDDFRWLT
                     MRIPSQPGFEIILMEPKPGYILDEESATQLKALMEKGVLGGGVFETDDIHKTYEELKA
                     RGVEFKGPPTTQSWGTATVMKDNSGNWFSVGQDKTAA"
     gene            2079..>2326
                     /locus_tag="VIT19_05515"
     CDS             2079..>2326
                     /locus_tag="VIT19_05515"
                     /inference="COORDINATES: protein motif:HMM:NF025482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4287 domain-containing protein"
                     /protein_id="HEY5838474.1"
                     /translation="MPRAAQATKTKSIYGVHPGVVMTQKWITQLKEKTGRTLEEWLKH
                     IKKEGPPTEQERRDWLKNELGLGTNTAWWMAERSVGKG"
BASE COUNT          608 a          609 c          650 g          459 t
ORIGIN      
        1 cgtcttacaa ctggatcaaa gacgcggccg agaagggctt ggattcgacg cgcttcatct
       61 ggtacgtcca gaagatggca actcccgata aggaaaactc agaattacag tttctctcgg
      121 aacgccgcaa gatcccgaat ccttacatca tcgcgatccc gccgaagcag accgcaaaga
      181 aaggcgacat cgtgttgacg tggtggcaga cgggttctgg catgcagcgc gccatcgtgg
      241 ttgacgacac cgacgcgagc gctcccgtcg tgcgttatct cgacattgat tacaacaacc
      301 cggccaaatc tcgcgacggt tcgacgacga tcggcaagat ggatgaaaag atcttgccgg
      361 acaccttcat taagctgaaa gactgggacg cgggaacgat tattactgtt caagacggcg
      421 ctaatctgaa aaaggcccac gtaattcgcg tggcgggtga cagagtctta gcgttggaaa
      481 acggcaaatt gcagatctat tcgaaagcga gttgccggcc tgtgccgctc gtgccgaatg
      541 taaaagaggg tgatcgggta aaggcgcccc gatacgggat gaattttgcg agtgcaaccg
      601 tctccagcgt cgatacgcgc aacggacgcg tcttcgtcag attcgatggc gacaataaag
      661 atgaagccat cgcgttcggc ggcgttctaa agtagcgaag ccagcactcc tgcgtctaaa
      721 gtccaaagtc caaagtccaa agtccaaagt ccaaagtcca aagtccaaag tctattcttc
      781 gctgacggac gttggacttg ggacattgca ctcaccggca gtagaatccg ctcgcaaaat
      841 gcctgaggct aaagccaaag tcgggagcga gattcacgag cgactctgtc gcgcgcgcgc
      901 cttcatcaac gagcgctatc acgaaccgat cgacctggat gagatttccc gtgaagcgtg
      961 cctctcacgc tatcactttc tccgactgtt tcgtgaagag tttgcgacca ctccacacca
     1021 gtacctgatc gatcggcgga ttgagaaagc taaggagtta ctcagacacc ggcgtctgac
     1081 ggttaccgac gtgtgcttcg aagtaggctt tcaaagcctc ggttcgttca gcacgctttt
     1141 tcgccagcgc gtcggtgatg ctccggtgaa ctatcgtcag caacagcgag aggcccagag
     1201 caaagttcca acctgtttcc tcgacatgta cgggcttggc gtgaaggatt agtagccgca
     1261 tcagttgtag cactcaagac agagcagctt atggtcagga agagccgctt gcggccgctc
     1321 gttcagtagg cgggggcaag ccccttttcc ttactgcaat tgtttcatct tgaatcgcac
     1381 aatcgcgagg tttacagcaa tgctctaaac acaggcggac gaggccgtcc gcgttcccag
     1441 cagtaacacc gcatttcagc aattttcgag aagccaacct tcgctgaaat ctgtatgctc
     1501 ctccgcgaat ccggcgaagg agactaacaa acatgattac gagaatgtcg catgcaacgg
     1561 tttgggtcag aaaccagcag gaggccctgg agttctatcg cgataaactc ggctttgaag
     1621 tcgacaccga tgcgatggtc ggcgatgact ttcgctggct gactatgaga attccgtctc
     1681 aacccggctt tgagatcatt ctcatggagc cgaaacccgg atacattctg gacgaagaat
     1741 cggcgacgca attgaaagcg ctgatggaga agggcgtcct gggcggcgga gttttcgaga
     1801 ccgacgatat ccacaagact tacgaggaac ttaaagccag gggcgttgag ttcaaggggc
     1861 cgccaactac tcagtcatgg ggaactgcga cggtcatgaa agacaactcg ggcaattggt
     1921 ttagcgtcgg tcaggacaaa accgcagcat aacgggggta cgcatgcctc cggcgtgcaa
     1981 gggtaacgca cgcctccggc gtgcttccga taaaagcaag ccagaggcat gcgtaccaca
     2041 aaagcatgcc tgaggcatgc gaaccgaagg aaacacaaat gcctagggcc gctcaagcga
     2101 caaaaacgaa atcgatctac ggcgtgcatc cgggcgttgt catgacgcag aagtggatta
     2161 cgcaactgaa agagaaaacc ggacgcacgc ttgaagaatg gttgaagcac atcaagaaag
     2221 aaggcccgcc gactgagcaa gagcggcgcg actggctgaa gaatgaactt ggtttgggaa
     2281 ccaacaccgc ctggtggatg gctgaacgtt cagtcggtaa aggcca
//
LOCUS       DATDBY010000299         6352 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1462026, whole genome shotgun sequence.
ACCESSION   DATDBY010000299 DATDBY010000000
VERSION     DATDBY010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6352
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1462026"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..455)
                     /gene="tyrS"
                     /locus_tag="VIT19_05520"
     CDS             complement(<1..455)
                     /gene="tyrS"
                     /locus_tag="VIT19_05520"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEY5838475.1"
                     /translation="MNLYDEFEWRGMLYEATPDLREVLAQEKVTAYIGFDPSAPSLHV
                     GSLLPVMGLARLQRFGHTPIAIAGGGTGLIGDPSGKTKERQLLDHGQVEANLAGIKEQ
                     LGRFLDFEAKPNPAQIVNNADWLGPITMMEFLRDVGKHFTVNNLLGKEA"
     gene            791..958
                     /locus_tag="VIT19_05525"
     CDS             791..958
                     /locus_tag="VIT19_05525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838476.1"
                     /translation="MEYLILLIVLFILLELVTLVGHGLWMALAKFFRKVSGCKTETSV
                     IQSSRLTSPAT"
     gene            complement(939..3269)
                     /locus_tag="VIT19_05530"
     CDS             complement(939..3269)
                     /locus_tag="VIT19_05530"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT domain-containing protein"
                     /protein_id="HEY5838477.1"
                     /translation="MKKLIPITASLLCFSLLVCSVLTPNGRGQELAPTTAGSPQTTAA
                     NLIIPQARSYAMRAHAQPIQISDVEADVRILQQVATTTLEIGLTNPSERQQEAEMLVP
                     VPDGAVVRSFTFAGSASEPTAKLLPKSEARTLYRSIVNKLRDPGLLEFAGYNLVRSSV
                     FPVPAQGKQRVRLVYEHVLAADGNRVDYVLPRSESFEATATPWKITVQIRFKTPLATV
                     YSPSHQIGVERAAPEQAMVKVEGGTKLEPGPFRLSYLTKGNGLTGSLIAYPDARVGGG
                     YFLLLAGIPPGAPATRQAIKREVTLVLDRSGSMAGEKIEQVRAAALQVVEGLEEGEAF
                     NIIDYSESIAKFAERPVVKNNDTISRARAYIKGLQSNGGTNIHDALVEALRQPPTPDM
                     LPLLIFLTDGLPTAGQTRESAIRNAVVATNTHKRRIFSFGVGFDVNAPLLTSIANDTR
                     AVATFVFPRENVEAKVSQVFRRLSGPVLADPQLTTLDANGVITTQAVGELLPAQLNDV
                     FEGDQIVLLGQYRTSDPLNFRITGNYLSRPRTFDLKFDLTGATTRNAFVPRLWASRKI
                     ARLIEEITRAGADSSASTRDPRSPSAVPASSAAGVDPKMKELVDEIIRLSTEYGILTE
                     YTSFLATEGTDFTNLEGLNNQASVGFSRDAQGTRSGMGGVTQAMNVTTQRAQSNSNRS
                     NTYLTQNMQRVEITNVQQISDRTFFRRNNRWVDASALPREKELKPERTIEFGTDEFYQ
                     LVDRLVAEGRQGILALSGEMLLLIDGKTVLVKSPAK"
     gene            3569..4891
                     /locus_tag="VIT19_05535"
     CDS             3569..4891
                     /locus_tag="VIT19_05535"
                     /inference="COORDINATES: protein motif:HMM:NF006771.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallo-hydrolase"
                     /protein_id="HEY5838478.1"
                     /translation="MNRREFGFGLAVATGGVMLKRSRAIAQGSGTVRVNGARLNANLL
                     ALAEFGKNPQGGVTRLAYSEADRQGREYVMGLMRAAKLDVSIDAAGNIIGRRHAAGGE
                     TKASPLVLGSHIDSVPDGGNYDGDVGSLGAIEVAQTLAENNIRPNRPLEVIIFQNEEG
                     GLIGSGAISGLLTEKELDLVSRSGKTIGEGIKFIGGDPAKITSVRRRPNSIAAYLELH
                     IEQGGVLDAEKIDIGVVEGIVGINWWDVTIEGFANHAGTTPMNNRQDALLAAAKFIEA
                     VNRVVTSVPGRQVGTVGRIQALPGAPNVIPGKVVLSLELRDLDAVKILTLYQQIRAEA
                     DQIARTNKVTFDFKEINTNIPAPTNPTIRRLIDQSAKELKLTTRVMPSGAGHDAQDMA
                     RLGPVGMIFIPSVGGISHSPKEFSRPKDIENGANVLLRTLLKLDGSNP"
     gene            complement(4936..5988)
                     /locus_tag="VIT19_05540"
     CDS             complement(4936..5988)
                     /locus_tag="VIT19_05540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838479.1"
                     /translation="MRLTTLTTTHVNYLNIALMVISCVLAFRFPFELFLISYAVLGPL
                     HYLTEISWLHDRKYFTEGKSGKASKRANKRWLILVGVTMVMLIAGFVAVEVIGAKVSP
                     KWEITFFYAVFVTALLVAVVKNTSARVLLLCGALALLMLFSVSRYYIIFAFFLVTVIH
                     VLIFTGAFILYGALKGRSVTGILSLVVFLLCVVSFFIFAPAGHTAGDYIQQSYRSFNG
                     LNVELIKLLQLGPGATAKDVYESQGGLMVMRLIAFAYTYHYLNWFSKTSIIKWHQVPK
                     ARTAVMIVVWLGALGLYGYDYDMGMAILYFLSILHVMLEFPLNHLTFAGIGRELHAMA
                     RSRRLTGGDQASRAGV"
     gene            complement(5996..>6352)
                     /locus_tag="VIT19_05545"
     CDS             complement(5996..>6352)
                     /locus_tag="VIT19_05545"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEY5838480.1"
                     /translation="FALIIVNVAANPRSLIRIENRLFVFLGNISFSIYMFHEIVIKLV
                     LESLVRTQGVAFNDAKSNLALYTLSIVLTLALSTLAYYGFERRFLRLKSSIAVVESGQ
                     DLIERGAPLVPTKSVG"
BASE COUNT         1448 a         1788 c         1807 g         1309 t
ORIGIN      
        1 atcgcttctt tgccgagcag attgttgacc gtgaaatgct ttccaacgtc gcgcagaaac
       61 tccatcatcg tgatcggccc gagccaatcc gcgttgttca caatttgggc cgggttcggc
      121 ttcgcttcaa aatccagaaa gcggcctaat tgctccttaa tgcccgccag gttcgcttca
      181 acctgtccgt gatcgagaag ctggcgctct ttagtctttc cgctcggatc accaatcagt
      241 cccgtgccgc cgcccgcgat cgcaatcggc gtatgaccga atcgctgtaa acgcgccaac
      301 cccatgaccg gcagcagcga tccgacgtgc aggctgggcg cggacggatc gaacccgatg
      361 taagcggtga ccttttcctg cgcgagcact tcgcgcagat ccggcgtcgc ttcatacaac
      421 atgccgcgcc attcaaactc gtcgtagagg ttcatcagcc cgtcatcata gcaagattag
      481 ttgagacgct cgaatgctct tcacgctgaa agcgtgattt ataatagccc agggtaagcg
      541 cgacgcgcgt caccgtgggc gaagttcggt agagccttcg gtggatgaac ccggtcgcgc
      601 gctcgcggtt tcgacacggt gctgaagtga ccgatgggcg actgagctcc gtgttcccgc
      661 cagggtgaaa cgggaataga gttcgctcgt gcttgtgaca gttttgatag gtgtcgcacg
      721 cagttcccag tttacgaccg agcatgcgtt ttctcagtgg gaagtcctac gcttcaacta
      781 gctgactcgc atggaatatc tcatccttct catcgtcctc tttatcctgc tcgaattagt
      841 cacgctggtt ggccacggcc tttggatggc gctggccaag ttctttcgga aggtcagcgg
      901 ctgcaaaacc gagacaagcg ttatccaatc ttcgcgtctc acttcgccgg cgacttaacc
      961 agcaccgtct tgccgtcaat taacagcagc atttcacccg acaacgcgag gatgccctgg
     1021 cggccttccg ctaccagccg atcgaccagt tgatagaatt cgtcggtgcc gaattcgata
     1081 gtgcgttccg gcttaagttc cttttcgcgg ggcagcgcgc tcgcatcgac ccagcggtta
     1141 ttgcgccgga aaaaagtgcg atcactgatt tgctgaacat ttgtaatctc aacccgctgc
     1201 atgttctggg tgagataggt atttgagcga ttagagtttg attgggccct ctgggtggtc
     1261 acgttcatcg cttgtgtgac accacccatg ccactgcggg tcccttgggc atctcttgag
     1321 aatcccacgg aggcctgatt gttgagcccc tccaaattgg taaagtcggt accttcagta
     1381 gccaggaacg acgtgtattc tgtcaggatg ccatactcgg tcgagagccg gatgatctcg
     1441 tccaccagct ctttcatttt cggatcgacg cccgctgcgg agctggccgg gaccgccgac
     1501 ggcgatctcg ggtctctggt actggctgag ctgtctgccc cggccctggt gatctcttcg
     1561 atgagccggg caatctttcg actggcccag agacgcggca caaaagcatt acgcgtggtg
     1621 gcaccggtca ggtcgaactt gagatcaaat gtgcgcggcc ggctaagata atttccggtg
     1681 atgcggaagt tgagcggatc actcgtccga tactgtccca gcaagacaat ttgatcgccc
     1741 tcgaaaacgt cattgagctg tgccggcaac aactcgccga cagcttgcgt ggtgatgacg
     1801 ccattcgcat cgagcgtggt cagttgcgga tcggcaagca ccggccccga aagacgccgg
     1861 aacacctgag agaccttggc ctcgacgttc tcgcggggaa acacaaaggt cgcgacggcg
     1921 cgggtgtcgt tggcgatcga ggtcagtaac ggcgcgttaa cgtcaaagcc cactccaaaa
     1981 ctgaagatgc gtcgcttgtg cgtgttggtc gccaccaccg cgttgcgaat cgccgactcg
     2041 cgagtctggc cggcagtggg caagccgtcg gtaagaaaga taagcagcgg cagcatgtca
     2101 ggagttggtg gttggcgcaa cgcttcgacg agcgcatcgt ggatatttgt gccaccgttt
     2161 gattgcagtc ccttaatgta ggcgcgcgcc cgggaaatag tgtcattgtt cttgactacc
     2221 gggcgttcgg cgaatttagc gatcgactcg gagtagtcga tgatattgaa tgcttcaccc
     2281 tcttcgagtc cttcgaccac ttgcagcgct gcggcgcgca cctgctcgat cttttctcct
     2341 gccatgctgc cggaacgatc gaggacgagc gtcacttcgc gcttgatggc ctgccttgtc
     2401 gccggcgcgc cgggtggaat gccggcgaga agcaggaaat aaccacctcc gacgcgcgcg
     2461 tcgggataag ctattagcga tcccgtaaga ccgttgccct tagtcagata ggaaagccga
     2521 aaggggccag gctcaagttt cgtgccgcct tcgaccttga ccatcgcctg ttccggggcc
     2581 gcgcgctcaa cgccgatttg atgactcggc gaataaaccg tggccagagg ggtcttgaat
     2641 ctaatctgca ccgttatctt ccagggcgtc gccgttgctt cgaatgactc gctgcgcggc
     2701 aaaacgtagt cgacccggtt gccgtcagcc gcgagcacat gttcataaac cagccgcacg
     2761 cgttgcttgc cctgcgccgg aacgggaaaa acactggaac gcaccaggtt gtatccggcg
     2821 aactccaaca gaccgggatc ccggagcttg tttacgatcg agcgatagag tgtgcgcgcc
     2881 tcagacttcg gcaggagttt tgcggtcggc tcgctcgcgg atcccgcgaa agtgaacgag
     2941 cgcaccacgg cgccgtcggg cacgggcacg agcatttcag cttcctgctg tctttcgctc
     3001 gggttcgtca gtcctatttc cagggtggtg gtagcgacct gttgcaggat gcgcacgtca
     3061 gcctcgacgt cgctgatctg aatcggctgc gcatgggcgc gcatcgcgta cgagcgggcc
     3121 tgaggaatga tcagattcgc agccgtcgtt tgaggactgc cggcggtcgt gggcgccaac
     3181 tcctgccccc ggccgtttgg ggtgagcaca ctgcaaacaa gcagggagaa gcaaagcaaa
     3241 cttgcggtaa tcgggatcag ttttttcata aacacctcgg gccggattgg tcaatactcg
     3301 cgaaaaacga atgaacgaac gaagcacgac tcgccctacc acgcaagaac gtaccggcgc
     3361 ggcaactctt gcactgcggc taagatggac ccatcgttaa cgtggttgcc atcggggcgc
     3421 cgcatctcgt cgtgattcac gggcaaagtg gcacgggcgt cccgcccatg aattccacgc
     3481 acaggatgcg cgtgccacct caaactgaac cagtagcaca gggctcattg atttcgcagt
     3541 cagatgcgag ccgtgataat aaggcgccat gaatcgacgt gaatttggtt ttggactggc
     3601 ggtggctacg ggcggcgtca tgttgaagcg ctcacgcgcg atcgctcagg gttcgggcac
     3661 cgtgcgtgtc aatggggcgc gtctcaacgc aaacctgctg gccctcgcag agttcggaaa
     3721 gaacccacag ggtggcgtga cgcgtcttgc ttacagcgaa gcggaccggc aggggcggga
     3781 gtacgtgatg gggctgatgc gggcggcaaa gctggatgta tcgatcgacg ccgccggaaa
     3841 tatcatcggc cgacgccacg cggcgggcgg tgaaaccaaa gcgtcgccgc tggttttagg
     3901 ctcgcacatc gacagtgttc cggacggtgg caattacgac ggtgacgtcg gctcgctggg
     3961 tgcgattgaa gtggcccaaa cacttgcgga aaacaacatc agaccgaacc gtccgctcga
     4021 agtgatcatt tttcaaaatg aagaaggcgg tttgatcggc agcggcgcaa tcagcggcct
     4081 gttgactgaa aaagagctcg atctggtaag tcgcagcggc aagacgattg gcgaaggcat
     4141 taagttcatc ggtggcgatc ccgcaaagat tacttcagtt cgtcgccggc cgaacagcat
     4201 cgccgcatat ctcgagcttc acatcgagca gggcggcgtt ctggacgcgg aaaagatcga
     4261 catcggcgtt gtcgaaggca tcgtcggcat caactggtgg gacgtgacca ttgaaggctt
     4321 tgccaatcat gcgggcacga caccgatgaa caaccgtcag gacgcgctgc tcgccgccgc
     4381 gaaatttatc gaggccgtta atcgcgtcgt aaccagcgtt cccggacgtc aggtcggtac
     4441 agtcggccgc attcaggctt tgcccggcgc gcccaacgta attcccggca aagttgttct
     4501 tagcctggaa ctgcgcgatc tggacgcagt gaagattctg acgctttacc aacagattcg
     4561 cgctgaagcc gatcagatcg ccaggacaaa caaagtcacg ttcgacttca aagaaatcaa
     4621 cacaaacatt cccgcgccca ccaacccaac gattcgccgc ctgatcgatc aatcggcgaa
     4681 ggaattgaaa ctgactacca gggtaatgcc cagtggcgcc ggtcacgacg cacaggatat
     4741 ggcgcgcctc gggccggtcg ggatgatctt cattccgagc gtcggcggca tcagtcactc
     4801 accgaaagaa ttctcgcgac caaaggacat tgagaatgga gcgaatgttt tgctgcggac
     4861 gttgctgaaa ctggacgggt caaacccctg aacggggcca gggtgcgggg cagtagtcgg
     4921 aaggttagcg agggctcaaa cgcctgcccg cgaagcttgg tcgcccccgg ttaggcggcg
     4981 cgaccgcgcc attgcgtgca actccctgcc aatgcccgcg aaagtgagat gattcaaagg
     5041 aaactcgagc atcacatgca ggatgctcaa aaagtacaaa atcgccatcc ccatgtcgta
     5101 gtcataccca tacagcccga gggcgccgag ccagacaaca atcatcaccg cagtgcgggc
     5161 cttcgggacc tggtgccact tgataattga agtcttggaa aaccaattca aataatggta
     5221 ggtgtaggca aacgcgatca atctcatgac catcagtccg ccttgcgact cgtagacgtc
     5281 ttttgccgtg gcgcccggtc ccaactgaag cagcttgatt aactccacat tcagaccgtt
     5341 gaaagagcga taactctgct gaatgtaatc gcctgccgta tggcccgccg gcgcaaagat
     5401 aaagaaactg acgacgcaca gcaagaaaac aaccagcgat aaaatcccgg tgacactccg
     5461 cccctttaga gctccataaa ggatgaacgc accggtaaag atgagtacat gaattaccgt
     5521 taccaggaaa aaagcgaaga tgatgtaata gcgggaaact gagaaaagca tcagcagtgc
     5581 cagcgcaccg cacaacagta gaacgcgagc cgaggtgttc ttaaccactg ccaccagcag
     5641 cgcggtaaca aaaaccgcat agaaaaatgt gatttcccat ttcggactta ctttcgcgcc
     5701 gatgacttcg accgcgacaa accccgcaat cagcatcacc atagttactc ccaccagaat
     5761 caaccacctc ttgttcgccc gttttgaagc cttaccggac ttgccctcgg tgaaatattt
     5821 tcgatcgtgc aaccaggaaa tctcagttaa ataatgaagg gggcccagca ccgcgtatga
     5881 gatgagaaac aattcaaatg gaaaccggaa cgcaagcaca cacgagatga ccatcagcgc
     5941 gatgttcaag tagttgacgt gagtcgtcgt cagagttgtg agcctcataa attcctcagc
     6001 cgacggattt ggtcggtacc aacggtgcgc ctcgttcgat caggtcctga ccgctctcga
     6061 ccacagcaat ggaagatttg aggcgcagga atcgtctttc gaagccgtaa taagcgaggg
     6121 tcgaaagggc gagcgttagc acgatgctca gagtgtaaag cgccaaattc gatttagcgt
     6181 cgttgaaggc cactccctga gttctcacca gactctctaa gaccagcttg atgacgatct
     6241 cgtggaacat gtagatgctg aaagaaatat tcccgagaaa aacaaacagc ctgttctcta
     6301 ttcggattag cgaacgcgga ttggccgcga cgttgacgat aattagcgcg aa
//
LOCUS       DATDBY010000300         2492 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2465305, whole genome shotgun sequence.
ACCESSION   DATDBY010000300 DATDBY010000000
VERSION     DATDBY010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2492
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2465305"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            264..1325
                     /locus_tag="VIT19_05550"
     CDS             264..1325
                     /locus_tag="VIT19_05550"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HEY5838481.1"
                     /translation="MRNSKHIVIMFVALLCAMLPSLGVAQTRERFGISAKAGGVNNVV
                     GRVRVTRKDQLPQVLTSTDDLAANETVTTASSSNAEILLNPGSYLRLGENSEFQFEDI
                     SLDNLRLRLLKGSAIIEATGVADMDLGIKIATENGEFTILRSGVYRVDVRPGFAEMAV
                     RKGRASFGPTKTDIVKGGKVVTLTNGGVAVANLTKDKDAFDGWSKQRAELLAQANARL
                     MNRSFNGYLSSFSGWDSWFWGPRRFGLWTYSARAGCYTFLPFYYGWSSPYGHGYGNYY
                     WRGSGCCNNYNNQGNTIVGTPNGSGNNPTGGNPTGVRPTTGGGPTGVWNPGSGPSTPS
                     VPREIDAGGIRMVNKRQDP"
     gene            complement(1339..1728)
                     /locus_tag="VIT19_05555"
     CDS             complement(1339..1728)
                     /locus_tag="VIT19_05555"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY5838482.1"
                     /translation="MATMYITIDEADRRPVYRQIAEEIKTLIARGELEEGVALPPVRQ
                     IASDLGVNLNTIAAAYRELQKQGFVRVRHGAGAFVAARQLSQQSEAELRKPLRASLTH
                     LALAGLPRSEILAIVNEELQQFFGRRS"
     gene            complement(1765..>2492)
                     /locus_tag="VIT19_05560"
     CDS             complement(1765..>2492)
                     /locus_tag="VIT19_05560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838483.1"
                     /translation="NSPVLRLSYGTEGKPVGVDLLSGERVIAKHAIISNLTIWDTYGK
                     LVGPSRTPRDVASELKKLTAWGAYQIFLGIDEAAIERLPSPRTLLVCDSDRDEYDPEN
                     QQLMLSLASGRGGAPEGKRALTAVAFTQADEWFSFHEDHSWHEEKDQALLESWWTKLH
                     QGLPQLGDSIEVIETSTPQTVYETTRRRLGMIGAPSAIDRRATLVPPFPNLFLVGDTA
                     SAGLGLEGVANSALGLADHLAPR"
BASE COUNT          547 a          686 c          727 g          532 t
ORIGIN      
        1 ggatctcgca ggctcgtacg atcgagtggt cgcggatttg gggacgcttt acacactttc
       61 ataccggcca accaacaaag ttcgtgacgg ttcgtggcgc gcgattcggg tgaccgtaag
      121 ccgcccgggg gcagtcgctc gcggtaagcg cggttacctg gcaaattgac gcttgaattg
      181 actggacaga cgccgtggcg gtgctataat cgcggcacct taaagtcaac ggcccaaagc
      241 cctctccccg gaggagttcg tcaatgagga attcaaaaca catcgtcatc atgttcgttg
      301 ctctgctgtg cgcgatgctg ccttcgctgg gcgtcgctca gacgcgtgag cgattcggaa
      361 tctcggctaa ggccggcggc gtaaacaatg tcgtggggag ggttagggtc acccgaaaag
      421 atcagctgcc gcaggtgctg accagcacag atgatctagc ggcgaacgaa acggtcacga
      481 ccgcctcctc gagcaacgcg gaaatcctgc tgaatcccgg ctcgtacctc agactcggcg
      541 agaacagtga attccagttt gaggacatct cgctcgataa cctgcgtctc cgtttactga
      601 aggggagcgc aattatcgaa gccacgggcg tcgctgacat ggatttgggg attaaaatcg
      661 ctaccgagaa cggcgaattc acgattcttc gtagcggcgt ctatcgcgtt gatgtgcggc
      721 cgggcttcgc cgaaatggcc gtcagaaaag ggcgcgcgag tttcggaccc accaagacgg
      781 atatcgttaa aggtggaaag gtcgtaaccc taacgaatgg cggcgtcgct gtcgctaacc
      841 tgaccaagga caaagacgcg ttcgatgggt ggagtaaaca gcgcgcggaa ttgctggccc
      901 aggccaatgc caggctaatg aaccggagct tcaacggtta tctctcaagc ttcagcggtt
      961 gggattcatg gttctggggg ccgcgacgat ttgggctttg gacatatagt gcgcgggcgg
     1021 gctgctatac attcctgccg ttctattacg gctggtcttc accgtacggt cacggctacg
     1081 gtaactacta ttggcgcggc tctggatgct gtaataacta caataaccag ggaaatacca
     1141 ttgttggaac gcccaatggt tctggaaata acccaacagg aggcaatccg actggagtta
     1201 gaccgacgac cggcgggggg cctactggag tttggaatcc aggttcagga ccatcaacgc
     1261 ccagcgttcc gcgcgagatt gatgcaggtg gtattcggat ggtgaacaag cgccaagacc
     1321 cctaagccga tcgcgcaatt agctgcgccg tccaaagaac tgctgaagtt cttcattcac
     1381 aatcgccagg atctctgagc gcggcaagcc cgctagcgcg agatgtgtga ggcttgcgcg
     1441 caaaggcttg cgcaactcag cctcactttg ctgcgaaagc tgccgagccg caacaaaggc
     1501 acccgccccg tgacgcaccc gaacaaatcc ttgcttctgt aactcacggt aggcggcagc
     1561 aatcgtattc agattcacgc ccaagtcgct cgcgatttgg cgaacgggtg gcaatgcaac
     1621 gccctcttcc aactcaccgc gcgcgataag tgtcttgatt tcctcagcaa tttggcgata
     1681 aacgggacgg cggtcggctt cgtcaatcgt aatgtacata gttgccatac actatacaat
     1741 attcgtcaag ccggatggga ttagtcaccg gggagcgagg tgatctgcga ggcccagcgc
     1801 tgaattggca acgccttcga gtccaaggcc cgccgaagcg gtgtctccca ccaaaaagag
     1861 gtttgggaac ggcggcacca gcgtcgcccg gcgatcgatg gcgctcgggg cgccgatcat
     1921 ccctaatctg cggcgcgttg tttcatagac agtttgcgga gtgctggttt caattacttc
     1981 aattgaatcg ccgagctgag gcaggccctg atgcagtttc gtccaccagg attccaacaa
     2041 ggcctggtct ttttcttcat gccaggaatg gtcctcgtga aaagagaacc attcgtcggc
     2101 ttgagtgaag gcgaccgccg taagcgcgcg ctttccttcc ggggctcctc cgcggccgct
     2161 tgccagactc agcatgagtt gctggttctc aggatcatac tcgtcgcggt ctgagtcgca
     2221 gaccagcagt gtgcgtggag aaggaaggcg ttcaatcgca gcttcgtcga ttccgaggaa
     2281 tatctgatac gcgccccacg ctgtgagctt cttcagttcg ctggcaacgt ctctcggcgt
     2341 gcggctcggg ccaacaagtt ttccgtatgt gtcccagatg gtcaggttgc tgatgatggc
     2401 gtgcttcgcg attacacgtt cgccacttaa caaatcaact ccgactggtt tcccctcagt
     2461 cccgtaagac aagcgcagaa caggtgaatt ca
//
LOCUS       DATDBY010000301         2909 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_412848, whole genome shotgun sequence.
ACCESSION   DATDBY010000301 DATDBY010000000
VERSION     DATDBY010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412848"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VIT19_05565"
     CDS             <1..333
                     /locus_tag="VIT19_05565"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEY5838484.1"
                     /translation="VLGVYDVGNLEEIKKYNAIETDADGRITFFEEKPKEPKSTITGI
                     ALYYYPKWSLELIKQYIADGNNPDQPGLLIQWLYPRTPVYVWRVPGIWFDIGSKETLE
                     EANLVFAR"
     gene            469..>2909
                     /locus_tag="VIT19_05570"
     CDS             469..>2909
                     /locus_tag="VIT19_05570"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEY5838485.1"
                     /translation="MLSLGAVPATGQTQTTGRITGTVRDQSGALIVRAEVTIVSLATG
                     EQREVDTGTSGTYILPLLRPGRYRLSVRAAGFSLAVLDSVLVAITETTIVNVELEVAG
                     MIVDPVFVRFSPLLKNDGPQLGRVVDSRPLSELPLATRNFTQILALSPGASVTLPDNT
                     ALGRNSQNVSVNGARVTQNNFELNGVDANNIATNAAALLAVPAPETIQEFTVQTSLYD
                     ASFGRGGGGSVQAVTRSGSNEFHGAAYEYFRDESLNANNPFLKAAGIGRPTLERNVFG
                     GMLGGPIRAERTFFFLSYQGTRERNGASPNSLSSSILIAPGLTNDRSSPTLLATFRPR
                     LPNGNLATAIHPVALALLNAKFSDAQFVIPTPQADGRYSGSAISTYREHQFNTNLDHR
                     ISRRNWLATRFFFSNAPHFLALPNGGANVPGFGADQAQNNRVFAVSDTHSFSSRAVNE
                     ARVGHSFIRGDSVGRNPLRDVDFGISRANAAAYPGLGLIRIGAAGTNAPAIGNSGANV
                     DQQSAQSSTTLADVFSLVRGAHNLRLGGEVLLYQDRITTNNNRRGQIAFQTFNNFLIG
                     VANNSTFGDGLATRTIRTADYSLFFQDDWRVSSRLTLNLGLRYELDLPPYEKDGALST
                     FDPSLYQPRIAVDAAGNPIGPPAAGFVQPGNVIAQYDLASVPNAGKRIVHSNDADNFG
                     PRIGFAYVPFKSDRLVLRGGYGVFYSRSSLIYLIVGVNAPPLYAVRRSPVGSQVAFAN
                     PYVALPSQEQFPTFVNGVSLAGQVFDRNLSTPYLQQYNASVQFELSRDMLIEAAYVGT
                     RGLNLIRSVGINQARL"
BASE COUNT          608 a          857 c          806 g          638 t
ORIGIN      
        1 gtcctgggtg tgtacgacgt cggcaatctg gaagagatta agaagtacaa cgcgatcgaa
       61 accgacgctg atggccgcat caccttcttc gaagaaaaac cgaaggaacc aaagagcacg
      121 atcacgggga tcgctttgta ctattatccg aagtggtctt tggagctgat caagcagtac
      181 atcgcggatg gaaataatcc ggatcagccc gggctgctga ttcaatggct ttaccctcgc
      241 acgccggttt acgtctggcg cgtgccggga atttggttcg atattggttc gaaggaaacc
      301 ctggaagaag cgaacctcgt cttcgctcgc tgaaccccta ccccaccctc aattttttcc
      361 tcgccgtggt gcgcaaaatg ggatataaga ccgcatacct acatgggttt tgcggtcatg
      421 aaacttttat ggcaaagact tcttccggcc atcggagcac ttgcctgtgt gctatccctc
      481 ggcgccgtac cggcaacggg gcaaacgcaa acaacgggaa gaatcactgg cacggtaaga
      541 gatcagagtg gggctctgat agttcgggcg gaagttacca tagtcagttt agcaactggc
      601 gagcagcgcg aagttgacac cggaaccagc ggaacttaca tcctgccgtt gctgcgcccc
      661 ggtcgttatc gtttgagcgt acgggcggcg ggattctcac ttgctgttct tgactcggtc
      721 ttagtcgcga ttactgagac gacgatcgtc aatgtcgaac tcgaagttgc tggaatgatc
      781 gtcgacccgg tcttcgtgcg gttttcgcct ctgctaaaaa acgacggccc acaactgggt
      841 cgggtcgttg attcgcgtcc gctatccgag ctaccgctcg cgacccgtaa cttcacacaa
      901 atcctggcgc tgtctcccgg ggcgtcggtg acgctgcctg acaacacggc gttgggccgc
      961 aactcgcaaa acgtctcagt caacggcgcc cgcgtcacgc agaacaattt tgagctcaat
     1021 ggtgttgacg caaacaatat cgccaccaat gcggcggcct tattggctgt gccggctccg
     1081 gaaacgatcc aggagttcac cgttcagacg tcgctctatg atgcgagctt tggacgagga
     1141 ggcggcggca gcgttcaagc ggtcacgcga agcggcagca acgagtttca cggcgcggct
     1201 tatgaatatt tccgcgacga gtcactgaat gccaacaacc ctttcctcaa ggccgccggt
     1261 atcggacggc ccacactcga gcgcaatgtc tttggcggca tgctcggcgg tccgattcga
     1321 gctgagagga cgtttttttt cctgtcgtac cagggcacgc gagagcgcaa cggcgcttca
     1381 ccaaacagtc tcagctcgag catcctgata gcgcccggcc tgactaacga tcggtcgtcg
     1441 cccaccctgc tcgctacgtt tcggccgcgg ctccctaacg gtaatttggc caccgcaatc
     1501 catccggttg ccctggcact gcttaacgca aagttctctg atgcacaatt cgtgatcccg
     1561 acgccgcaag ccgacggacg ctattccggc tcggcgatat cgacatatcg cgagcatcaa
     1621 ttcaatacca atctcgatca tcgcattagt cgacgcaatt ggctggcgac gaggttcttc
     1681 ttttcaaacg cgcctcattt tcttgctttg cccaacggcg gcgcgaacgt gccggggttc
     1741 ggcgccgacc aggcacagaa caaccgcgtg tttgccgttt ctgacactca cagcttcagc
     1801 tcgcgcgcgg taaatgaagc gcgggtgggc cacagcttca ttcgcggcga tagcgtgggt
     1861 cgcaatcctt tacgcgacgt cgatttcgga attagccgtg ctaatgcggc cgcctatcca
     1921 ggccttgggc taatacgaat cggcgccgcg ggaaccaacg cgccggcgat tggcaactca
     1981 ggcgctaatg tcgatcagca gtcagcgcaa tcgtcaacga ccctggccga cgttttctcg
     2041 ctcgtacgtg gcgcgcataa cctgcggctg ggcggtgaag tgctgcttta tcaggacagg
     2101 ataacgacaa acaacaatcg tcgagggcaa atcgccttcc agactttcaa taactttttg
     2161 atcggcgtcg cgaataactc gacctttggc gacggcctcg ccacgcggac catccgcacc
     2221 gccgactaca gcctgttctt ccaggacgac tggagagttt catcgcggct gacgttgaat
     2281 cttggactac gctacgaatt ggaccttccg ccatatgaaa aggacggagc actctcgact
     2341 ttcgatccgt ccctgtatca gccgaggatc gcggtcgatg ccgccggcaa tccaatcggt
     2401 ccgccggccg ccggatttgt gcagcccggc aacgttattg ctcagtacga tctcgccagc
     2461 gtgccgaatg ccggcaagcg catcgtccac agtaacgacg cagacaactt cggaccgcgc
     2521 atcggtttcg cgtacgtgcc tttcaagtct gatcggctcg tgctgcgcgg cggttacggc
     2581 gttttttact cgcgctcgtc gttgatttac ctgatcgttg gggtgaatgc gccgccgctt
     2641 tacgcggtcc gccgcagccc cgtgggatct caagtggcgt tcgccaatcc ttacgtggca
     2701 ttgccgtcac aggaacaatt tcccacgttc gttaatggag tctctctggc ggggcaggtc
     2761 tttgatcgaa atctgagcac gccttacctg cagcaataca atgcgagcgt tcaatttgaa
     2821 ttgagccgcg acatgctgat cgaagcagct tacgtcggca cgcgcggcct caacctgatt
     2881 cggagtgtcg gaatcaacca ggcgagact
//
LOCUS       DATDBY010000302         2277 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1137754, whole genome shotgun sequence.
ACCESSION   DATDBY010000302 DATDBY010000000
VERSION     DATDBY010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1137754"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="VIT19_05575"
     CDS             <1..438
                     /locus_tag="VIT19_05575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838486.1"
                     /translation="WRDLLRVYRRLEARGEIRGGRFVGGFSGEQFASPDSVHLLRSIR
                     RTEPNGSMIAISAADPLNMLGILLPGPRLPQAASNRLLCRDGVPIAVLEAREIRFLIE
                     LDAADEWQARNALLRRRVPPKVRAYLNQSGSTASPTTVSRLTH"
     gene            689..886
                     /locus_tag="VIT19_05580"
     CDS             689..886
                     /locus_tag="VIT19_05580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838487.1"
                     /translation="MASDKTNKRELIDTGTDKRFVRRDDKGRFDDVVDVGKSLAQDRR
                     QHAETEVEPGQGDRGDQKRDE"
     gene            921..1271
                     /locus_tag="VIT19_05585"
     CDS             921..1271
                     /locus_tag="VIT19_05585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HEY5838488.1"
                     /translation="MNKKIALIGGLGLGAALMYLFDPDRGGRRRAVIREKAEGAANQA
                     GEYAEKLSHDLRNRASEVVSEAKAIFKGADNPSVFHAEEDDAASSQGTNAPFGSEPAR
                     AGNHYPSLGEPHVL"
     gene            1273..1536
                     /locus_tag="VIT19_05590"
     CDS             1273..1536
                     /locus_tag="VIT19_05590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838489.1"
                     /translation="MDTPVCDICGTIPDFAAAKLREGETLPGGVADLVDAYPSPEGFW
                     DTSKEYEITKSCPQCEQLFTYHYYYEFSVGYVEESAWIERQKR"
     gene            complement(1581..>2277)
                     /locus_tag="VIT19_05595"
     CDS             complement(1581..>2277)
                     /locus_tag="VIT19_05595"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEY5838490.1"
                     /translation="GKSTTLSAFIHEINMRQQSHIITIEDPIEFVHENQKCLISQREV
                     ASHTKSFAAALRAALREDPDIILVGEMRDLETISLAITAAETGHLVFATLHTNSAVKT
                     IDRVIDVFPETQQSQIRVMLAESLRGVVAQSLLPRSGDKSRVPVMEVMVNVPAVANLI
                     REGKTHQITTVMQTSRGLGMTTFETATQDLINKGLISKEDGMSFLRRRSAAQQMSGTG
                     NHTPRVAGSFAVN"
BASE COUNT          496 a          617 c          669 g          495 t
ORIGIN      
        1 tggcgagacc tgctgcgcgt ttatcgtcgt ttggaggcac gcggtgagat tcgcggcggt
       61 cgcttcgtcg gcgggttctc aggtgagcaa ttcgcgtcgc cggactcggt gcatttgctc
      121 cgctcgatcc gtcgaaccga accaaacgga tccatgatcg cgatcagcgc cgccgatcct
      181 ctgaacatgc tgggcattct tcttcccgga ccgaggctgc cgcaggcggc ttcgaatcgt
      241 ctgttgtgtc gcgacggagt tcccatcgcc gtactggagg ccagggaaat tcgtttcctt
      301 atcgagttgg acgcggccga tgaatggcag gcgcgcaatg cgcttttgcg gcgacgcgta
      361 ccgccgaagg tgcgcgctta tctgaatcag tccggatcaa ctgcgtcgcc cacgacggtg
      421 tcacgactta cgcactgaat ccgaagaggc tagagcttag gggctggagg ctggttctaa
      481 agccggctac agcaccgaag cgcttaactg gtttcctaac ctctaacctc cagcttccag
      541 cctctagcca tgcggcatcg ggattgcact caattcaaat cgatcgcatt tttataaggc
      601 gcagtggatc attcgcgaac actttcgctg attgtgttcg ccaaggcgac acgtgcggac
      661 ttcagatttt caagaaggag agggcaagat ggcttcagac aaaaccaata aacgagaatt
      721 aatcgacaca ggcacagaca agcgtttcgt cagacgcgac gataaaggtc gcttcgacga
      781 tgtggtggat gtcggcaagt cgctggccca ggatcgtcgt cagcatgcgg agacagaagt
      841 cgaacccggc cagggcgacc gcggcgatca aaaacgagat gagtgaaggt caaagaaccg
      901 aattaaaaga aggagctttt atgaataaaa agatagcgtt gattggcggc cttggattgg
      961 gcgccgcctt aatgtacctg ttcgacccag atcgtggggg ccggcgccgc gcggtgattc
     1021 gcgaaaaagc cgaaggcgca gcaaaccagg cgggcgaata cgccgaaaaa ctgtctcatg
     1081 acttgcgcaa tcgcgcttcc gaggtcgtct ctgaagccaa agcgatattc aagggcgcgg
     1141 acaatccgtc agtttttcac gctgaggagg atgacgcggc gtcatcgcag ggcacgaatg
     1201 cgcctttcgg atcggagccc gcaagagctg gcaaccatta tccgagtctc ggcgagccgc
     1261 acgtactgta atttggatac gccagtctgc gacatctgcg ggaccattcc cgactttgcc
     1321 gccgcgaaac ttcgtgaagg cgagacattg cccggcggcg tcgcagacct cgtggacgcc
     1381 tacccctctc cagagggttt ttgggacacg agcaaggagt acgagattac caagagttgc
     1441 ccgcagtgcg agcaactctt cacgtatcat tactactatg agttttcggt aggctacgtg
     1501 gaagagagcg cgtggattga acgtcagaag cgttgagcta gcggcatcga aataaacaga
     1561 tcggcgcggc cggtttgcag ttagttgaca gcgaagctac cggcgactcg cggcgtgtga
     1621 ttgcccgtgc cggacatttg ttgcgcagca ctgcgccggc gcaggaagct catcccgtct
     1681 tccttcgata ttagcccctt gttaattaga tcctgtgtcg ccgtttcaaa cgtcgtcatg
     1741 ccaagaccac gactggtttg catcacggtc gtgatttgat gggttttgcc ttcgcgaatc
     1801 aggttcgcga cggcggggac gttgaccatc acttccatca ccggaactcg acttttatca
     1861 ccagaacgcg gcaataacga ctgggctacc accccgcgta aactctcggc caacatcacg
     1921 cgaatctgcg actgctgagt ctccggaaag acgtcgataa cacgatcgat cgtcttcaca
     1981 gcgctgttgg tgtgtaacgt cgcaaacacc aggtggccgg tttcagcggc ggtaatggcg
     2041 agtgaaattg tctcgaggtc gcgcatctcg cctactagaa tgatgtccgg atcctcgcgc
     2101 agcgccgccc gcaatgcggc cgcaaaggat ttcgtatggc tggcgacttc gcgctggctg
     2161 atcaggcatt tctggttctc gtggacgaat tcgatcgggt cttcgatcgt gatgatgtga
     2221 gactgctgtc gcatgttgat ctcgtggata aacgcagaca gtgtcgtgct tttgcct
//
LOCUS       DATDBY010000303         3536 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2067695, whole genome shotgun sequence.
ACCESSION   DATDBY010000303 DATDBY010000000
VERSION     DATDBY010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3536
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2067695"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..502
                     /locus_tag="VIT19_05600"
     CDS             <1..502
                     /locus_tag="VIT19_05600"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEY5838491.1"
                     /translation="DYDKGVLTPRVLREVLSGAYEQMPVLVDPKIRNFDSYRPATLVT
                     PNHHEALRLTNTEEDSEGALRNAALKIRERLACDAVLITRGDRGMVLFEKDNEPVNVE
                     TTAREVYDVTGAGDTVIATLAGALAGGGSLIEAALLANYAAGIVVGKLGTATATMDEV
                     LDSIGS"
     gene            499..2163
                     /gene="dacB"
                     /locus_tag="VIT19_05605"
     CDS             499..2163
                     /gene="dacB"
                     /locus_tag="VIT19_05605"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEY5838492.1"
                     /translation="MIFRRTAFLLIALLLVAPASRPAVAQQSQRPRTTTTVTASGVPV
                     ETSSAQTLTELRTRIEQIVRQPALDAGFFAVKIVSLDTGAVIFEQDSRKLVRPASNMK
                     IYTVATAFDKLTPDYRFITSVYAKEKLDDDGKVKGDLIIYGRGDPSIAARFNDGDYFK
                     GINALADRIVAAGVKRIKGDLVGDESYFDGDSFGSGWTWQDLQWSYGAPVSALTVNDN
                     AIDLTVRPGSKAGAAVSITSGPPATSFMTIVNRATTTAKGTRSDLRIHRGLGANTMEI
                     SGTVAVGDDGFTGGVAIPDPALAFVAMLRDALIKRGVKIDGRLRTVTARTGGSIVPVT
                     SGATTQDAGKMPALPGALPGALPVEIASLPSAPFNEIAAHTLKPSQNLYTELILRTLG
                     RMRKSAPPPDETRRASQTDEDAGLAAVRDFLRQAGVSEGQTNLDDGSGLSRSDLIMAD
                     ATVQLLTFMTKHRYFAQFRDALPIAGVDGTLRNRMKGTPAEKNLRAKTGTLSSVASLG
                     GYVTTAAGERLVFSMMLNNYADASALRRDSIDAIAVLLASFDGKTQ"
     gene            2226..2411
                     /locus_tag="VIT19_05610"
     CDS             2226..2411
                     /locus_tag="VIT19_05610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838493.1"
                     /translation="MSANIKEEARRLVDSLPDDSTWEDLMYQIYVREAVEKGLADAEA
                     GRVTDVKKVREEFGLPT"
     gene            2395..2730
                     /locus_tag="VIT19_05615"
     CDS             2395..2730
                     /locus_tag="VIT19_05615"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEY5838494.1"
                     /translation="MDSPRDVVWSDTAKQSLRAMHAYIAQSSPEFARRMVDRITSRSE
                     QIAAFPLSGRVVPEFNVGQLRELFQRPYRIIYHVRPDKIEVVAIVHMSQRINQPADET
                     QEGETNNVS"
     gene            2720..3232
                     /locus_tag="VIT19_05620"
     CDS             2720..3232
                     /locus_tag="VIT19_05620"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEY5838495.1"
                     /translation="MSVDPIIGGWREVRAGLIDEVSQIPADQFSFRAAEGMRSVAELL
                     QHLVESQKFLVGEACRPDTNLLRKSFAENIKDYAPDVRNVNDKEAIIQMLRTAMDDCE
                     KCLRENADEMKNAMKRFDGKEMTKLGFMSFAIAHEMYHRGQLTVYVRLLGIEPMLTQK
                     FRKAFGASPP"
BASE COUNT          762 a          956 c         1095 g          723 t
ORIGIN      
        1 tgattacgat aaaggtgtgc ttacgccgcg cgtgctccgc gaggtcttgt cgggggctta
       61 cgaacaaatg ccggtgctcg tcgatccaaa gattcgtaac tttgattctt accgcccggc
      121 gacgctggtc acgcccaatc atcacgaggc gttgcgactc acaaacaccg aagaagattc
      181 agagggcgcg ttgcgaaatg ccgcgctcaa aattcgcgag cgcctggctt gtgacgcggt
      241 gctgatcacg cgcggcgatc ggggaatggt cctttttgag aaagacaacg agcccgttaa
      301 tgttgagacg acggcgcgcg aagtctacga cgtcaccgga gcaggggata cggtcatcgc
      361 gacgttggcc ggggcgctgg cgggcggcgg ctcgttaatt gaagctgcgt tgctcgccaa
      421 ctacgcggcc ggaatcgtcg tggggaaact tggcaccgcg acggcaacca tggacgaagt
      481 tttggattca attggatcat gatatttcga cgtacagcat tccttcttat tgcgcttctg
      541 ctggtcgcac cggcatcgcg gcccgcagtt gctcagcagt cgcagcgacc gcgcaccact
      601 accacagtta cggcaagcgg agttccggtt gagaccagct cggcccaaac gctcactgaa
      661 ttacgaactc gaatcgagca gatcgtgcga cagccggctc tcgatgcagg cttcttcgcg
      721 gtgaagattg tttcgctcga cacgggcgcg gtgattttcg agcaggattc cagaaagctc
      781 gtgcggcccg cgtcgaacat gaagatttac accgtcgcca ccgccttcga taagttgacg
      841 ccggactatc gctttatcac gtccgtttac gcgaaagaga aactggacga cgacggaaag
      901 gtcaaaggcg atctaatcat ctacggtcgt ggggatcctt ccatcgccgc gcgcttcaat
      961 gacggagatt acttcaaagg catcaacgca ctggccgatc gaatcgttgc tgccggagtg
     1021 aagcggatca aaggcgacct ggttggcgac gaaagttatt tcgatgggga cagcttcggc
     1081 agcggatgga cctggcagga tttgcagtgg tcatatggcg cgccggtcag cgccctcacc
     1141 gtgaacgaca acgctatcga cctgacggtg cggccgggca gtaaagccgg cgcggcggta
     1201 tcgatcacca gtggccctcc ggcgacatcg ttcatgacga tcgttaatcg cgcgacgacg
     1261 acagccaaag ggacgcgcag cgatttgcgg attcatcgcg ggcttggcgc aaacacgatg
     1321 gagatttccg ggacggtcgc cgtcggtgac gacggcttta ccggaggcgt tgcgattccg
     1381 gatccggcgc tcgcattcgt cgcgatgctg cgcgatgcgc tcatcaagcg cggcgtgaaa
     1441 atcgatgggc ggctgcgaac cgtgactgcg cggacggggg gcagcattgt tcccgtgaca
     1501 tccggtgcga cgacgcaaga tgcgggcaag atgcccgcgc tcccaggggc gctcccaggg
     1561 gcgctcccag tcgaaatcgc cagcttgccc tcggcgcctt tcaacgagat cgcggcgcat
     1621 actttgaaac cgagccagaa tctctacacc gaattgattc tgcgtacgct cgggaggatg
     1681 cgaaagagtg cgccgccacc ggacgagacc cgccgggcga gtcagactga cgaggacgcg
     1741 ggattggctg cggttcgtga ttttctaaga caagccggcg tgagcgaggg ccagacgaat
     1801 ctcgatgatg gctcgggtct gtcacgtagc gacctgatca tggcggatgc gacagtgcag
     1861 ttgctgacgt tcatgacgaa gcatcggtac tttgcgcagt ttcgcgatgc gctgccgatc
     1921 gccggcgttg acggcacgct gcgcaatcgc atgaagggaa cgcccgctga gaaaaacctg
     1981 cgagcaaaaa ccggtacgct cagttcggtt gcgtcgttgg gaggctatgt cacgacggcc
     2041 gcaggcgagc gacttgtgtt ctcgatgatg ctgaacaact acgcggacgc ctcggcgttg
     2101 cgccgcgatt caatcgacgc gatcgcagtt ctgctggcct cgtttgacgg caagacccag
     2161 taggcttcgg aacgattgcg cgctgctggt gaagctgatt taattatcaa aagggaagtg
     2221 atcatatgag tgcaaacata aaagaagaag cacgccgact agtggattca ttgccggatg
     2281 actcgacttg ggaagatctc atgtatcaga tttatgtccg ggaggcggtc gagaaaggcc
     2341 tcgctgatgc ggaggcaggg cgtgtgactg acgtaaagaa agtaagagaa gaatttggac
     2401 tccccacgtg acgttgtctg gagtgacacc gcgaagcaaa gcctgcgcgc gatgcacgct
     2461 tacatagcgc agagttcacc agagttcgcg cgtcgcatgg tggacaggat tacaagccgc
     2521 tccgaacaaa ttgccgcctt cccgctgtcc gggcgagttg ttccggaatt caatgtcggc
     2581 cagctccgcg aattattcca acggccgtat cgaattatct atcatgttcg gccggacaag
     2641 atcgaagtcg tcgcgatcgt tcacatgtct cagcggatta accaaccggc cgacgagact
     2701 caagaaggag aaaccaacaa tgtcagttga tccaatcatc ggcggttggc gtgaagttcg
     2761 cgccggcttg atcgatgaag tttcccagat tccggctgac cagttctcgt tccgcgccgc
     2821 tgaaggaatg cggtcggtcg ccgaactgct tcagcatttg gtcgagtcgc agaagtttct
     2881 cgtcggtgaa gcctgccggc ctgacacgaa ccttttgcgg aaatccttcg cggagaatat
     2941 caaggactac gcgcccgacg tgcgcaacgt gaacgacaaa gaagcaatca tccagatgtt
     3001 gcggacggcg atggacgatt gtgaaaagtg tttgcgcgag aatgctgacg agatgaagaa
     3061 cgcgatgaag cgttttgacg gcaaggagat gacgaagctg ggcttcatgt catttgcgat
     3121 tgcgcacgag atgtatcatc gcgggcaact caccgtttac gtgcgtctgc tcggcattga
     3181 accgatgctg acgcagaagt tccgcaaggc ctttggggcc tcgcctccgt agatttggag
     3241 tgcgccggcg cggggtcccc gcgcgagcat ctcgcgtggg gtgctcttga cggcgcttta
     3301 gttcgttcgt tgtttactgg ccctgccgag aataagaaag cggcgtcaag ccgccgcact
     3361 ccaaaatgca tttcacaaaa tttcacggtt tcggtaacga ctatttggtt ttcgaagccg
     3421 atcagttggc gaacgtcgct gacctgggtc ggttcgcgca tcgcatttgt aatcggcatt
     3481 acggcgccgg cggcgacggg attgccgtcg ttgcgggttc gtccgacgcg aaatcc
//
LOCUS       DATDBY010000304         2103 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_129341, whole genome shotgun sequence.
ACCESSION   DATDBY010000304 DATDBY010000000
VERSION     DATDBY010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129341"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1015
                     /locus_tag="VIT19_05625"
     CDS             <1..1015
                     /locus_tag="VIT19_05625"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEY5838496.1"
                     /translation="TIPLPSGRTIDAKLPTYQMPKVRKHASGYFVAPGMDVIDLFIGS
                     EGTLGVIIEAEVRLLPKPEALLSGVVFFAGEEDLLGFVRESRERSLWHRLQSVADLSD
                     SQTEACATLDARALEYFDEESLRFLRQKYTTIPDQAVGAIFFEQETSPPTEESLLSEW
                     LELTERYQALGDQSWFATNEQDHAKLREFRHALPVLMNEWFAKYKQRKVSTDMAVPDD
                     SFVEMLNFYRDALRGGELRYTIFGHIGDNHVHVNILPRDGAEAAKAREIYQTFIHKAV
                     ELGGTISAEHGIGKLKREYLGEMYGDQHLREMAAVKRAFDPAGILGRGNMFDEEYLSV
                     VSR"
     gene            1181..>2103
                     /gene="aroC"
                     /locus_tag="VIT19_05630"
     CDS             1181..>2103
                     /gene="aroC"
                     /locus_tag="VIT19_05630"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEY5838497.1"
                     /translation="MFRFTTAGESHGRALVAIVEGLPAGLPLNVDQINHELWRRQQGY
                     GRGARMKIEKDEVEVLSGVRHGVTLGSPLALMIENKDWANWDEVMAVEPKELAPEKSR
                     RVKRPRPGHADLAGGLKYDARDLRNVLERASARETAARVACGAIAKQLLEQFGLEIRS
                     HVIQLGGIPELPLDLTFDQVSSIPDDSPLRCADANAQQRMIQLIDETKAEGDTLGGVF
                     EVIARDAPPGLGSHTAWDLKLDGRLAQAIMSIPAVKAVAIGAGIEASGLPGSKVHDEI
                     GYSEEAKEFKRETNRAGGLEGGVTNGEEIRVR"
BASE COUNT          479 a          555 c          640 g          429 t
ORIGIN      
        1 cacgattccg cttccttccg gccgcacgat cgacgcgaaa ctgccaacgt atcaaatgcc
       61 gaaggttaga aagcacgctt caggatattt tgtcgcaccg ggaatggacg tgatcgatct
      121 tttcattggc agcgaaggga cgctgggtgt aatcatcgaa gccgaagtgc gattactgcc
      181 aaagcctgaa gcgctgctga gtggggtcgt gttcttcgct ggtgaggagg acctgctcgg
      241 ctttgttcgc gagtcgcgcg agcgatcact gtggcacaga cttcagtctg tggctgattt
      301 atccgattca cagactgaag cctgtgccac gctcgacgct cgcgcgctgg aatattttga
      361 cgaagagtcg ctgcgcttcc tgcgccagaa atacaccacc attcctgacc aggcggtcgg
      421 cgctattttc tttgagcaag aaaccagccc gccaacggaa gagtcgctac tgagcgaatg
      481 gctggaactg actgaacgtt atcaggcctt aggcgaccag tcatggtttg ccacgaacga
      541 acaggatcac gcgaagctgc gcgaattccg tcacgcgctg cctgtgctga tgaacgaatg
      601 gttcgcgaaa tacaagcagc gcaaagtctc gactgacatg gccgtgccgg atgattcatt
      661 cgttgaaatg ctgaacttct atcgcgacgc attgcgcggc ggtgaattgc gctacacgat
      721 ctttggtcac atcggcgaca atcacgtcca cgtcaacatt ctgccgcgcg acggagcaga
      781 agccgcgaag gctcgggaga tctatcagac cttcattcac aaggcggtcg agctgggcgg
      841 cacgatttcc gccgaacatg gcatcggcaa attgaagcgt gagtatttgg gcgagatgta
      901 tggcgatcag cacttgcgcg aaatggctgc agtaaaacga gccttcgatc cagcggggat
      961 actgggtcga ggaaatatgt ttgatgaaga gtacctgtca gttgtcagtc gttagttgtc
     1021 cgttgtcgtt ttgtactttg tactttgagc ttggtacttt gatgtggagt cagagtaaag
     1081 ccggaattgt gaagacgcct tttaggttag acatcaaagc acaaagtacg aagaacaaag
     1141 cacagaactg acaactgacg actgactact gacactcaga atgttccgct tcaccaccgc
     1201 cggcgaatca catggacgcg cactggtcgc gatcgtcgaa ggtctgccgg ccggactgcc
     1261 cctcaacgtc gatcaaatca atcacgagtt gtggcgacgg cagcaaggtt atggccgtgg
     1321 cgcgcggatg aagatcgaga aagacgaagt cgaagtcctc agcggtgtgc gccatggcgt
     1381 gaccctcggt tcgccgctgg ccctgatgat tgaaaacaag gattgggcga actgggacga
     1441 agtgatggcg gtcgagccga aagagctggc gcccgagaag tctcggcgcg tcaaacgccc
     1501 ccgtcccggc cacgcggact tagccggcgg gttgaaatac gacgcgcgcg atttgcgtaa
     1561 cgttctggag cgcgcgtcgg cacgcgagac ggccgcgcgc gtcgcttgcg gcgcgattgc
     1621 aaagcagttg ctggaacagt ttggcctcga gattcgcagt cacgtgattc agctcggcgg
     1681 gattcctgag ctgcccttgg accttacttt cgatcaagtc tcatcgattc cggacgactc
     1741 gcctttgcgc tgcgccgacg caaacgcgca acagcgaatg attcaattga tcgatgaaac
     1801 aaaagccgaa ggcgacacgc ttggcggcgt ctttgaagtc atcgcgcgcg acgcgccgcc
     1861 cggactggga tcgcacaccg cttgggatct gaaacttgac ggccgtctgg cgcaggcgat
     1921 catgtcgatt ccggcggtca aggccgtggc tatcggcgca ggaattgaag cgagtgggct
     1981 tcccggctcg aaggttcacg atgagatcgg ctacagcgaa gaagcgaagg aattcaagcg
     2041 cgagaccaac cgtgccggag gcctggaagg cggcgtgaca aacggcgaag agattcgggt
     2101 gcg
//
LOCUS       DATDBY010000305         2713 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1878811, whole genome shotgun sequence.
ACCESSION   DATDBY010000305 DATDBY010000000
VERSION     DATDBY010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2713
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1878811"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1575
                     /locus_tag="VIT19_05635"
     CDS             <1..1575
                     /locus_tag="VIT19_05635"
                     /inference="COORDINATES: protein motif:HMM:NF019155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HEY5838498.1"
                     /translation="TAETEAAEFHSTYKLDVMVVPTHMPMVRRDNPDVIYRTLPEKWD
                     AVVEEIRELNQKGQPVLVGTVSVENSELIARRLQRAGVPHNVLNAKYHEREAEIVAQA
                     GRKGMVTIATNMAGRGTDILLGGNPDFMTREFLKEQEVDPDDANESQWQQEFLKAKRI
                     VEAEHKEVVSLGGLHILGTERHESRRIDNQLRGRAGRQGDPGSSRFFLSLEDDLMRIF
                     AGDKVKALMQRLGMEAGTAIESKMVSKRIAAAQKSVEGRNFETRKHLLEYDDVMNKQR
                     ETIYGLRRRLMEEADQREFMVGETGVAHDLLSDLTRHYLDADASPETWDIENYKVQIK
                     TIYALDRELEEIDFDISAPQEIEDFLWEKLKGKYAEKEKQIGDEAMRTYERIIMLNII
                     DAQWKDHLLALDHLKQGIGLVGYGQKDPLVEYKKESFIMFQAMLDRIDTTTIRSLFNL
                     QVVAEESPEEIQRRRLAARRRGGMQFTGPNQGATAAGEEAGKTKTIVRDQPKVGRNDP
                     CPCGSGKKYKKCHGAT"
     gene            1611..2354
                     /locus_tag="VIT19_05640"
     CDS             1611..2354
                     /locus_tag="VIT19_05640"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEY5838499.1"
                     /translation="MIRILPLLLLLAYGGSSTVAGQVASPEDRDRAIALVENNPAEAI
                     TLLNSVLQRNKKDVRAWHWLAKAFEKHNQPDAGAKAHETAAKTAYQIQTATDGRRSLS
                     KTELLEAADSADRILILKPSLSNKSRKEWRERADFFRLVARSGASDIATYKSSEVTER
                     ARVVRKPEPSFTEDARKNLTSGTVVLRCVFSADGRVKNIVVIRGLPDGLTERSIEAAK
                     QIKFIPAKKDGKPVSMWMQLEYNFGFDRW"
     gene            2528..>2713
                     /locus_tag="VIT19_05645"
     CDS             2528..>2713
                     /locus_tag="VIT19_05645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838500.1"
                     /translation="MKKFLLALLIVFATATFAAADTIYLRDGRQVRGTLLGFINGQFV
                     LRVETQSSTPATTTRRRD"
BASE COUNT          653 a          740 c          804 g          516 t
ORIGIN      
        1 accgcggaaa ccgaagcggc cgagtttcat tcgacgtaca aactcgatgt gatggtagtt
       61 ccgacgcata tgccgatggt gcgcagggac aatccggacg tgatctatcg cacgttgccc
      121 gagaaatggg acgcggtcgt cgaagagatc agagagctga accaaaaagg ccagccggtg
      181 ctggtcggca cggtgtcggt ggaaaactcc gaattgattg cgcgccgttt gcagcgcgcc
      241 ggcgtgccgc acaacgtttt gaacgcgaag tatcacgagc gcgaagccga gatcgtcgcg
      301 caagccggcc gcaagggcat ggtgacgatc gcgacgaaca tggccggccg cggcacggac
      361 attctgctcg gcggcaatcc ggacttcatg acgcgtgagt tcctgaagga gcaggaagtc
      421 gatcctgacg acgcgaacga atcgcaatgg cagcaggaat ttttgaaggc caaacgtatc
      481 gtcgaggccg agcacaagga agttgtttcg ctcggcggcc tgcacatcct gggcactgaa
      541 cgtcacgaat cgcgtcgcat cgacaatcag cttcgcggtc gcgccggtcg ccagggcgat
      601 ccggggtcgt cgcgtttctt cctttcactc gaagacgatc tgatgcgcat ctttgccggc
      661 gacaaggtca aggccttgat gcagcgactc ggcatggaag cgggcaccgc gatcgaatcg
      721 aagatggttt cgaaacgcat cgcggcggcg caaaagtcgg tcgaagggcg caacttcgaa
      781 acgcgcaagc acctgctgga atacgacgac gtcatgaaca agcagcgcga gacgatttac
      841 ggcttgcgcc gccggttaat ggaagaggcc gaccagcgcg agttcatggt gggggaaacc
      901 ggcgtcgcgc acgatctgct ttcggatctg acgcggcact acctcgatgc tgacgcgtct
      961 ccggaaacct gggacatcga gaattacaaa gttcaaatca agacgatcta cgcgctcgat
     1021 cgcgagcttg aagaaatcga tttcgacatt tcggcgccgc aggaaatcga agacttcctt
     1081 tgggagaagc tgaagggcaa gtacgccgag aaggaaaagc agattggcga cgaggcgatg
     1141 cgcacttacg agcgcatcat catgctgaac atcatcgacg cgcagtggaa ggaccacttg
     1201 ctggcgctgg atcacctgaa gcagggcatc ggcctggtcg gttacggaca gaaggatccg
     1261 ctggtcgaat acaagaagga aagcttcatc atgtttcagg cgatgctcga ccgcatcgac
     1321 acgaccacca tccgttcgct cttcaacctg caagtcgtcg ccgaagaatc tcccgaagaa
     1381 attcagcgcc gccgtctggc cgcgcgccgt cgcggcggga tgcagttcac cgggccgaac
     1441 cagggcgcca ccgctgccgg tgaagaagcc ggcaaaacga aaaccatcgt acgcgatcaa
     1501 ccgaaagtag gccgcaacga tccgtgtccc tgcggctctg gcaagaagta caagaagtgc
     1561 cacggcgcga cgtagagtcg cggtgcctgt gcgtctcagt aggttcaaac ttgattagaa
     1621 ttcttccgtt gctacttctg ctggcatacg gcgggagttc gactgttgcc ggtcaagttg
     1681 cgagtccgga agatcgcgat cgagcgattg cgctcgttga gaacaatccg gctgaagcaa
     1741 tcaccctcct caactctgta ctccaacgaa acaaaaaaga cgtgcgcgcg tggcactggc
     1801 tcgccaaggc gtttgaaaaa cataatcaac ccgatgccgg cgctaaagct cacgaaacgg
     1861 cggcaaagac tgcatatcag atccagacgg caactgatgg caggagatcg ctctctaaaa
     1921 cagagttgct cgaggccgcc gatagcgccg accgcattct tattctcaag ccatctctct
     1981 cgaacaagag cagaaaagaa tggcgcgagc gcgcagattt ctttcggttg gtcgcgcgca
     2041 gcggcgcttc agacatcgca acgtacaaga gcagcgaggt aaccgagcgg gcgcgcgtcg
     2101 tgcggaagcc tgagccttct tttacggaag acgcgcgtaa aaatttgact tcgggaacgg
     2161 tagtgctgcg gtgtgtcttt agcgccgacg ggcgagtaaa gaacattgtg gtaatcaggg
     2221 gactgccgga cggactgacc gagcgctcca tcgaggcggc gaaacaaatc aagttcattc
     2281 ctgccaaaaa ggacgggaag ccggtctcaa tgtggatgca actggagtac aactttggtt
     2341 ttgatcgttg gtaggctcga aggcgcgacg tgagactttt taactgtcgc atgcatgcgc
     2401 tcccttgccc cgtgtttcgc ttcgggtata agctaatcga gtaaatcccc ttaaatgctc
     2461 tcccgcttcc gttcggcgct aaatgcgatc cgaatcggaa aatcttgtgg aaaaaagagg
     2521 agtcatcatg aaaaagtttc tacttgcttt actgatcgtc tttgcgaccg cgacgtttgc
     2581 cgccgccgac acgatttacc tgcgcgacgg aagacaggtt cgcggcacgc tgttgggttt
     2641 tattaacggc caattcgttc tgcgcgtcga gacgcaatca tcaacacccg cgaccactac
     2701 gcgtcgacga gat
//
LOCUS       DATDBY010000306         4365 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_880349, whole genome shotgun sequence.
ACCESSION   DATDBY010000306 DATDBY010000000
VERSION     DATDBY010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4365
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_880349"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..483)
                     /locus_tag="VIT19_05650"
     CDS             complement(<1..483)
                     /locus_tag="VIT19_05650"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEY5838501.1"
                     /translation="MKRVVPFVLILVVLIGGLLAVWRLSQPAPPSGPSGGPTPAPGSL
                     PEGAKPAHIRGNPNAPVTLEEFADFQCGACGAYHHELKKIEAEFGERLRVIFREHPLY
                     PNHQYSIVAAQAAEAAGLQSENHFWLMHDKLFENQKAWSEAKDKDAAVAMFVDYAKQI
                     G"
     gene            complement(519..983)
                     /locus_tag="VIT19_05655"
     CDS             complement(519..983)
                     /locus_tag="VIT19_05655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838502.1"
                     /translation="MKRYSAWVAFGLLLFVVLACNLSKNKNSNIDVNINSNSNTNRPA
                     NAEVYTEEVYAAKSEDGAATSTFAPSDRTVHVVINLNKAKAGTDVRVVWIADEVEGAA
                     NKELKTLEYTTKAFDKKIPGYLRWSQDWPKGRYRVAVHINGNLDRTIYYDVQ"
     gene            complement(1029..1730)
                     /gene="purQ"
                     /locus_tag="VIT19_05660"
     CDS             complement(1029..1730)
                     /gene="purQ"
                     /locus_tag="VIT19_05660"
                     /inference="COORDINATES: protein motif:HMM:NF002957.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HEY5838503.1"
                     /translation="MKFGVIVFPGSNCDHDAYHVISKHVGQPVDFIWHRETDLSSYDA
                     LIIPGGFSYGDYLRAGALASFSPVMASVKQFAAQDKLVLGICNGFQILCEAGLLPGAL
                     IRNRELHFVCEHVNVRVESTDTPFTHELRRGQVLKMPVAHAEGNYVCDDATFEELQRD
                     NRVIFRYSDRDGTVSPEANINGSRDNIAGICSRGRNVMGLMPHPERACEDALGSSDGR
                     AIFHSLVGAVTAIAA"
     gene            complement(1835..2080)
                     /gene="purS"
                     /locus_tag="VIT19_05665"
     CDS             complement(1835..2080)
                     /gene="purS"
                     /locus_tag="VIT19_05665"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEY5838504.1"
                     /translation="MKAKVYVTLKPSVLDPQGKAIKHSVELLGYNGIDDIRQGKYFEI
                     ALDSGLNEDNARTEATRMAREILSNPIIEDFRVEIEK"
     gene            2251..2694
                     /locus_tag="VIT19_05670"
     CDS             2251..2694
                     /locus_tag="VIT19_05670"
                     /inference="COORDINATES: protein motif:HMM:NF021221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HEY5838505.1"
                     /translation="MSSPYDAGGPPSGAPGGKTSLGLDSNVGAMLCYIANFLCCLGVI
                     LSIVFLVTEKENRFVKFHALQSLFLVATQIVVGIIVGILGLFLRFAFETADLGILSFF
                     IILGLRLILLLIFVIIWIFAGVKAYGGQWYKLPFIGDLAWNTVNK"
     gene            2731..3135
                     /locus_tag="VIT19_05675"
     CDS             2731..3135
                     /locus_tag="VIT19_05675"
                     /inference="COORDINATES: protein motif:HMM:NF021221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HEY5838506.1"
                     /translation="MDTGKSALGLDGNVAAALGYPIGIIAIISVIMEKENSFVKFHAI
                     QSLCFHVAMIILMIALWIIGAILLVGGAAASVATESGAASGLAGMLFGLLWLVFIVVY
                     FLGLILAAVKAYQGAMFKLPIIGNMAAKWAGV"
     gene            complement(3202..>4365)
                     /gene="purB"
                     /locus_tag="VIT19_05680"
     CDS             complement(3202..>4365)
                     /gene="purB"
                     /locus_tag="VIT19_05680"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEY5838507.1"
                     /translation="RINEIEKTTDHDVIAFTTNLAESIGEAARFVHYGLTSSDVVDTA
                     NALLLRDASDILLKKIDALLDVLKRRAFEFKQTPQIGRTHGIHAEPTSFGMTFALWYD
                     EMRRNHARLTRAREAVAVGKLSGAVGSFAHLGPEVEEKVCERLGLKPAPVSTQIVQRD
                     SYAEYLCTLAIIASSLDKFALQVRHWQRTEVREAQEKFKKGQKGSSAMPHKRNPILSE
                     RICGMARVVRAHSIVGLENVALWHERDISHSSAERVVLPDSSIATDYILQKAAALLDG
                     LVVYPERMLENLNATRGLVFSGQLLLALTQAGTARETAYEWVQRNAMKCWDEGADFRE
                     LVSADKDIAAHISREQIDAVFSLDKYLKNVDEVFARVFDTEPRAIASRTNTQT"
BASE COUNT          886 a         1210 c         1229 g         1040 t
ORIGIN      
        1 gccgatctgc ttcgcgtaat ccacgaacat cgcaacggcg gcgtctttat ccttcgcttc
       61 cgaccacgcc ttctggtttt cgaaaagctt gtcgtgcatc agccagaaat ggttttcact
      121 ttgcagaccc gcggcttcgg cggcctgggc cgcgacgatc gaatactggt ggttcgggta
      181 aagcggatgc tcgcgaaaga tgacccgtaa tcgttcgccg aattcggctt cgatcttttt
      241 tagttcgtga tggtaggcgc cgcacgctcc gcattgaaaa tcggcgaact cttcgagcgt
      301 cacaggcgca ttcgggttgc cgcggatgtg cgcgggcttt gcgccttcag gcagagatcc
      361 gggcgcgggc gtcggaccac ctgaagggcc agagggcggc gcgggttgtg acaggcgcca
      421 cacggccagc aatccgccga tcaggaccac gagaataagt acgaagggga cgactcgttt
      481 cattaaaaga ggccgccgct cgcgattgcc ggagcgacct actgcacgtc gtaatagatt
      541 gttcggtcaa ggttgccgtt aatgtggacc gcgacccggt aacggccctt gggccaatcc
      601 tgtgaccaac gcaagtaacc gggaatcttt ttgtcgaatg ctttcgtcgt gtattcgagg
      661 gtcttcagct ctttgttggc ggcgccctcg acctcgtcgg cgatccagac aaccctgacg
      721 tcagtgccgg ctttcgcttt gttgagattg atgacgacgt gcaccgtgcg gtccgacggc
      781 gcaaaagttg aagttgccgc gccgtcctct gatttggcgg cgtacacttc ttcggtatag
      841 acctcggcgt tggccggccg gtttgtgttg ctgttgctgt taatgttgac gtcgatgttg
      901 ctgttcttgt tcttcgagag attgcaggcc agcactacga aaagaagcaa gccaaaggct
      961 acccaggcgg aataacgttt catttcaaaa agtccctttc ttcgcataag taacgaagga
     1021 atgtttgctt aagctgcgat cgcggtgacg gcgccgacca gcgaatggaa aatcgcgcgc
     1081 ccgtcgcttg agccgagcgc gtcttcgcac gcccgctcag ggtgcggcat caaacccatg
     1141 acatttcgtc cccgactaca gatgccggca atgttatcac gcgagccgtt gatgtttgct
     1201 tctggcgaaa ccgttccgtc gcgatcgctg tagcgaaaga taactcgatt gtcgcgctgt
     1261 aactcttcaa acgtcgcgtc gtcgcagacg tagtttccct cggcgtgcgc cacgggcatc
     1321 ttcagcactt gtccgcgtct cagttcgtgc gtgaacggcg tgtcggtgct ttcaacgcgc
     1381 acgttcacgt gctcacagac aaaatgcagt tcgcgattgc gaatcaaagc gccgggcagt
     1441 agtcccgctt cgcacagaat ctgaaagccg ttgcagattc ccagcaccag tttgtcttgc
     1501 gccgcgaatt gtttaactga ggccatgacc ggcgagaaac tcgcgagcgc gccggccctc
     1561 agatagtcgc cgtaagaaaa gccgccggga atgattagcg cgtcgtagga ggaaagatca
     1621 gtctcgcgat gccagatgaa atcgaccggc tggccgacgt gttttgagat gacgtgataa
     1681 gcgtcgtgat cgcaatttga gccgggaaaa actatgacac cgaatttcat attttgtagc
     1741 gcaagccttg gagtgcgccg gcttgacggc gcttttgctc ctaacgcctg actcaatcaa
     1801 ctccaaagcg gcgtcgagcc gccgcattcc aaattcactt ttcaatctct acgcgaaaat
     1861 cttcaatgat cgggttcgac aaaatctcgc gcgccatccg cgtcgcttcc gtgcgcgcgt
     1921 tatcttcatt caacccactg tcgagcgcga tctcgaaata cttgccttgc cgaatgtcgt
     1981 cgatgccgtt atatccgagc aattcgactg aatgcttgat agctttgcct tgcgggtcca
     2041 ggacgcttgg cttcaaagtg acgtaaactt tagctttcat tgtggtgcgt gggtacgcac
     2101 gcctccggcg tgctcaagcg cgccagcggc gcgcgtaccc aaagaacgca cgataatacg
     2161 gcaaacattg cgtaaacggt agccgatatc atagtatttg ccgcgaccac gctcgttgat
     2221 tctttgatcg tttgaaataa ggatacttaa atgtcttccc catacgacgc gggcggcccg
     2281 ccgtcaggag ctcccggtgg caagaccagt ctcggactgg attccaatgt cggggcgatg
     2341 ctctgttaca tcgcgaactt tctttgttgt ctgggagtaa ttctcagcat cgttttcctc
     2401 gtcactgaaa aagagaatcg cttcgtcaaa tttcatgcgc tgcaaagtct gtttctggtc
     2461 gctactcaga ttgtggttgg tatcatcgtc gggatcctcg gcctgtttct acggtttgcg
     2521 tttgagacgg ccgacctggg aatcctctcg ttctttatca tcctcggcct gaggctgatc
     2581 ctgttgctga tcttcgtcat catctggatc ttcgcgggcg tcaaggcgta cggcggtcaa
     2641 tggtacaagc tgcccttcat cggcgacctg gcctggaaca ccgtgaacaa ataacactgt
     2701 caacaactta gtcgaacagg agaaatcaaa atggacacag gtaagtctgc cctcggactt
     2761 gatggaaatg tcgccgccgc gctcggttac ccgatcggca tcatcgcgat catctcggtg
     2821 atcatggaga aggagaatag cttcgtgaag tttcacgcga ttcaatctct atgtttccac
     2881 gtagccatga tcatacttat gattgcgctc tggatcatcg gcgcgattct gctggtcggc
     2941 ggcgcagcag cttcggttgc aaccgaaagc ggcgcggcca gcggactggc cggaatgtta
     3001 ttcggcctgc tctggctggt gtttattgtg gtgtactttt tgggtctaat tctggcggcg
     3061 gtcaaggcct accagggagc gatgttcaag cttccgatca tcgggaacat ggccgccaag
     3121 tgggccggcg tttagtggtt attagctgcg ctcgcagcta gatgttacag aaccgcgagc
     3181 cgtagcgagc ggatgacaga ctcaagtttg agtgtttgtc ctgctcgcta tggctcgcgg
     3241 ttctgtatca aacacccgcg caaaaacctc atcgacgttc ttcagatatt tgtccagcga
     3301 aaaaacggca tcgatttgtt cgcgactgat gtgagcggcg atgtccttgt ccgctgagac
     3361 cagctcgcgg aaatctgcgc cctcgtccca gcacttcatt gcatttcgct gtacccattc
     3421 gtaagccgtt tcacgagcgg tgcccgcttg cgtcagcgcc agcagcagtt ggccgctgaa
     3481 gaccagcccc cgcgtcgcgt tgaggttttc cagcatgcgc tctggataga caacgagacc
     3541 gtcgagcagc gctgccgctt tctgcagtat gtaatcggtg gcgatactgg aatcaggcaa
     3601 cacgacgcgt tcggcagacg agtgcgagat atcgcgttca tgccacagtg cgacgttctc
     3661 aagcccgacg atgctgtgcg cgcgcacaac ccgcgccatc ccacaaattc tttcggaaag
     3721 gatcggattg cgcttgtgcg gcatcgcact cgaccccttc tgccccttct tgaatttctc
     3781 ctgcgcttcg cgaacttcgg tgcgctgcca gtgacgaacc tgtagggcga acttatcgag
     3841 cgaggaagcg atgatggcca acgtgcagag atattcagcg taagaatcgc gctggacgat
     3901 ttgcgtcgag accggtgcgg gtttcaatcc gagccgctcg caaacttttt cttcgacttc
     3961 gggaccgagg tgagcgaacg agccgacagc gccgctcaat tttccgacgg cgaccgcttc
     4021 gcgcgcgcgc gtcaggcgcg catgattgcg gcgcatctcg tcgtaccaaa gcgcgaacgt
     4081 catcccgaac gaggttggtt cggcgtgaat tccgtgggtg cgaccgatct ggggcgtctg
     4141 cttgaattca aaggcgcggc gcttcagcac gtcgagcagc gcatcgattt tcttcaaaag
     4201 gatgtcactc gcatcgcgca gcaacagcgc attcgcggtg tcgacgacat cggaagaagt
     4261 cagtccgtag tgaacgaacc gtgcggcttc gccgatcgat tcggccaaat ttgtggtgaa
     4321 cgcgatcacg tcatgatcgg ttgtcttctc gatttcgttg atgcg
//
LOCUS       DATDBY010000307         2521 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2888886, whole genome shotgun sequence.
ACCESSION   DATDBY010000307 DATDBY010000000
VERSION     DATDBY010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2888886"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..958
                     /locus_tag="VIT19_05685"
     CDS             <1..958
                     /locus_tag="VIT19_05685"
                     /inference="COORDINATES: protein motif:HMM:NF025616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4349 domain-containing protein"
                     /protein_id="HEY5838508.1"
                     /translation="SIRRLKMRLTTLLVLTLSLYFLAGCGGRMRNAERASAPISTTQS
                     AEQGFSDTKQLRTREVGSSEDVSLNQADAANAASQAVARKIIRNGNLTIEVSSPTETQ
                     SRIFSIAETRGGFVVTSEMSQQDTDDKSKPTQSVTLVVRVPALQFEQAMTEIRSGATR
                     VLHDKRTGQDVTEEFIDLEARIKNQRALEGQFLEIMKRANKVEEALDVQRQLAEVRTE
                     IEKIEGRRRFLENQATLSTINVTLQTPTQIVNASGFMYGIRSAFSDGVDAAAEIILVL
                     IRVVVALLPILILIVLPAALIARFFVKRVRRGRRAQEEVKAT"
     gene            955..1530
                     /locus_tag="VIT19_05690"
     CDS             955..1530
                     /locus_tag="VIT19_05690"
                     /inference="COORDINATES: protein motif:HMM:NF022853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HEY5838509.1"
                     /translation="MNLHQLKLAHFMRQRMKRVWFAASLLFVAAIAPLFLHGCSKPAT
                     NQGPAASQTSQREVRSSADVVSLGGTGTAISGGNDGEALVMLNIEAGYHVNANPATYP
                     YLIATEVTANKVEGLDVGKAIYPPAKKQKFQFAEEPLAVYEGQIEVKLPFKAAGKGSR
                     ALPLNIRVQACDHEKCFPPATLNTSVSVEVK"
     gene            1530..1733
                     /locus_tag="VIT19_05695"
     CDS             1530..1733
                     /locus_tag="VIT19_05695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838510.1"
                     /translation="MTRERVFTILSGLFLLSAALLLWWNNLTAAFVTATLGIVAWFLS
                     FRAQTRARVAAESPIERDEDIED"
     gene            1723..2259
                     /locus_tag="VIT19_05700"
     CDS             1723..2259
                     /locus_tag="VIT19_05700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838511.1"
                     /translation="MKTNPAFVALLLAVVVFGAMCQPAAAVVSDESDARGTIQSVFDQ
                     LKSGNYAALYDSLPSSSRSRITKERFVSGLQRTSDLYQLQRIEIGAVRVSGNLAVADT
                     TMYARVNKPLSADGKLVVQQYLVREDGQWRVATGDNATINRFLKANPSFARRFPIRNP
                     KAYINQNGKWVEIPMGRR"
     gene            complement(2323..>2521)
                     /locus_tag="VIT19_05705"
     CDS             complement(2323..>2521)
                     /locus_tag="VIT19_05705"
                     /inference="COORDINATES: protein motif:HMM:NF024139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY5838512.1"
                     /translation="EILQVSETTVRRMAQKRRIPSVRLTPRIIRFHLDAVREALDVPR
                     VSRPSGKTDDAQLSFEDLMSN"
BASE COUNT          595 a          702 c          698 g          526 t
ORIGIN      
        1 ttcgattcgg aggctaaaaa tgcgattaac tactctcctc gtccttacat taagtctcta
       61 cttcctggcg ggctgcggcg gcagaatgcg aaacgccgaa cgcgcgtcgg cacccatatc
      121 aaccacccaa agtgcggagc aaggattttc ggacacgaag cagctccgga caagggaggt
      181 cggcagttcc gaggatgttt cgctgaatca ggcggacgcc gcaaacgccg catcccaggc
      241 agtcgcgcga aagataatcc gcaacggcaa cctcactatc gaggtttcat ctcccacgga
      301 aacgcaaagc agaatcttct ccatcgccga gacacgcggc gggttcgtcg taacttccga
      361 gatgtctcaa caagacaccg atgacaaatc taaacccaca caatccgtga cgctggtcgt
      421 ccgcgtgccc gccctgcaat tcgaacaagc gatgaccgaa atccgcagcg gagcaacccg
      481 cgtgttgcat gacaagcgaa ccgggcagga tgtcacagag gaattcatcg atctcgaagc
      541 gagaatcaag aaccagaggg cgcttgaagg ccagtttttg gaaatcatga agcgcgctaa
      601 taaggttgaa gaggcgctgg atgtgcaacg gcagttggca gaagtgcgaa ccgaaattga
      661 aaagatcgag gggcggagac gcttcctcga aaatcaggca acgctctcga ccatcaatgt
      721 cacgttgcaa acccctactc agatcgtgaa tgctagtggc ttcatgtacg gcatccggtc
      781 tgcgttctct gatggcgttg acgcggccgc tgagataatc cttgttctga taagggtggt
      841 cgtcgcgctg ttaccgatcc tgattttgat agttttgccc gcagccttga tcgcccgatt
      901 tttcgtcaag cgcgtccgtc gtgggcggcg agctcaggaa gaggtcaaag caacgtgaac
      961 ttgcatcaac ttaaacttgc tcatttcatg cggcagcgca tgaaacgtgt ttggttcgcc
     1021 gcttctctgt tatttgttgc cgcaattgcg cctctattcc tgcacggctg ctcgaaacca
     1081 gcgacgaatc aaggaccggc ggcctctcaa accagtcaac gcgaggtccg atcctcggct
     1141 gacgttgtga gcctcggagg aacgggcacc gcaatctccg gcggcaatga tggcgaagcg
     1201 ctcgtgatgc tgaatatcga ggcgggttat cacgtcaatg caaatccggc cacgtatcct
     1261 tacttaatcg ccacggaagt gacggccaat aaggtcgagg gactggatgt cggaaaggca
     1321 atctacccgc ccgcaaaaaa acagaaattt cagtttgcgg aagaaccgct ggctgtctat
     1381 gaaggccaga tcgaggtgaa gcttccgttc aaagccgccg gcaaagggtc gcgcgcgctg
     1441 ccgctgaaca tacgcgttca agcctgcgat catgagaagt gtttcccgcc ggcaaccctc
     1501 aacacgagcg tatcagtcga agtgaagtga tgacgagaga gcgcgtgttc acaattctct
     1561 ccggcttatt tctactctct gccgccctgc tgctttggtg gaacaatcta actgcggcat
     1621 tcgttactgc gactttgggg atcgtggcgt ggtttctcag cttccgggcg cagacgcgcg
     1681 ccagagtggc agcggaatca ccgattgaaa gagatgaaga tattgaagac taaccctgcc
     1741 ttcgttgctc tgcttttggc agtcgtcgtc tttggggcga tgtgtcaacc cgccgcagcc
     1801 gttgtatccg atgagagcga cgcgcgcggg acaattcaga gcgtgttcga tcagttgaaa
     1861 tcaggcaatt acgccgcgct ctatgactcg ctgccgtcat cctcgcgctc tcgtattacg
     1921 aaagaacgtt tcgtcagcgg cttgcaacga accagcgacc tctatcagct ccagcgaatc
     1981 gaaatcggcg ccgtccgcgt atccggaaac ctggccgtgg ccgacacaac gatgtacgca
     2041 cgcgttaata agcctctgag cgcagacggc aaacttgtcg tccagcagta cctggttcgc
     2101 gaagatggtc aatggcgcgt ggcgacgggc gacaatgcga cgatcaatcg cttcctgaaa
     2161 gctaaccctt cgtttgcgcg acggtttccc atccgcaacc cgaaggccta catcaatcag
     2221 aatggaaaat gggttgagat cccgatgggc cggcgataat agcggcgcag acttcagtct
     2281 gtgatttcag cggtcgattc acagactgaa gtctgtgcca cctcaattcg acatcaaatc
     2341 ttcaaacgac aattgtgcgt cgtcagtttt gccgctcggc cgcgacacac gcggcacgtc
     2401 cagcgcctca cgaacagcat cgagatgaaa acggatgatg cgcggcgtta gtcgcacgga
     2461 gggaatgcgc cgcttctggg ccatgcgacg cacggtggtc tcgctgactt gaagaatctc
     2521 a
//
LOCUS       DATDBY010000308         3553 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_860627, whole genome shotgun sequence.
ACCESSION   DATDBY010000308 DATDBY010000000
VERSION     DATDBY010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3553
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860627"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1525)
                     /locus_tag="VIT19_05710"
     CDS             complement(<1..1525)
                     /locus_tag="VIT19_05710"
                     /inference="COORDINATES: protein motif:HMM:TIGR04514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HEY5838513.1"
                     /translation="MFATRIILIFSALVVTVNISAQPATKSSDPQDKPRKVRPEPHKA
                     FKQWLQEVEPIIRPEELNAWNKLRNDEEREQFILEFWRLRDTDRDTEENEYREAYFER
                     FAYVNEHFTAGIPGYKTDRGKIYLKYGKPDEIESHPSGGSYQPPSHERFNATSTYPFE
                     KWWYRHIPGHNDVEIEFVDPAGTGEYRIARNPFEKIATLHMPGGVSIPGVNQADIISA
                     ASGFGNPFSSRAKDSGFEWMELLRIRDEAPSVNFDRDRGTGTSTPVTDDNFLTSNLQI
                     SFFRQSDDRVIVAFTVQADNRDLVFREVGGLQTARLNIAGRIMNVSGRRVGFFEDAVT
                     TTATSAELINAKERKSAYQKALPMLPGRYRIDLLVRDVESGAAGIQHVGFQVPKFGKD
                     LAASSLVLASVLANVSDVPASRQFVIGDKKVIPNLTATYRRGSPIGVYMQIYNAGVDQ
                     ATLRPSVDVEYALIKDGKEIGKQTEDWRGNSDSGQRLTLARLVDSRGLNPGDYLIEVR
                     "
     gene            complement(1609..3225)
                     /locus_tag="VIT19_05715"
     CDS             complement(1609..3225)
                     /locus_tag="VIT19_05715"
                     /inference="COORDINATES: protein motif:HMM:TIGR04514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HEY5838514.1"
                     /translation="MSFPRSSRLAVAILALAFAAIPLAAQPKNPQDPSEKPRKVKEEL
                     HKAFKTWLDKDVAYIITDEERRAFKKLETDDEREHFIEEFWRRRDPDPDTDENEYREE
                     YYERIAYANEHFASGIPGWKTDRGRIHIMYGKPDEKETHPSGGMYNRESYEGGGSTST
                     YPFERWFYRYIAGVGSGVEIEFVDPTGSGEYRIARNPDEKDALLHIPGAGLTLAESMG
                     LSDKGDRISGLGGVGTANYRREQDSPFSRLQLLTDLQRPPQIKFNDLASAVNTPVIED
                     NPLNFDVRVDFFRQSDERVITAFTIQTDNNNLVFQDSGGLQQAQLNIFAKITHVSGRR
                     AGVFEDPVITRATAQELVEAKERKSAYQKAVALSPGRYRVDVIVRDIASGATGVRHIG
                     FEVPRYDPSKLATSTLILAVKLEGLGDKPAVGMFTIGNVKVIPNVSGTYHRGSPIGVY
                     MQIYNAGVDQTTLRPSVDVEYALMKDGKEIGKQIEDWRGNSDSGQRLTLARLVDSRGL
                     NPGEYAVEVRVRDRVSGQNLVQSAKFTILP"
BASE COUNT          751 a          993 c         1007 g          802 t
ORIGIN      
        1 cgcgaacttc gattaggtaa tcgccgggat ttaagccgcg cgaatcgacc agccgcgcca
       61 gtgtcaggcg ctggccagag tcgctgttgc cgcgccagtc ctcggtctgc tttccgattt
      121 ctttgccgtc ctttatcagc gcatactcaa catccaccga gggacgcagc gttgcttgat
      181 ctacgccggc attgtaaatc tgcatgtaga caccaatggg tgaaccacgc cggtaggtcg
      241 cggtcagatt tggaatgact ttcttgtcgc cgatcacgaa ctgtcgcgag gccggaacat
      301 cagaaacgtt tgccaggact gacgccaaaa ccagcgacga ggccgccaga tccttcccaa
      361 acttcgggac ctggaacccg acgtgctgaa tgcctgcggc gccggattca acatcacgca
      421 ccagcaagtc gatccgatag cggcccggca gcattggcag cgccttctgg tacgcggact
      481 tcctttcttt tgcgttaatc aattcggcag aggtcgcagt ggtggtgacg gcatcctcaa
      541 aaaaaccgac gcgccggccc gagacgttca tgatgcgacc ggcaatattg agccgcgcag
      601 tctgaagccc gcccacttca cggaaaacca aatcccgatt gtcagcctga acagtaaagg
      661 caacgatgac acgatcgtcc gactgtctga agaagctgat ctgaagattt gaagtgagaa
      721 agttgtcgtc agtgaccggc gtgctcgttc cggttccccg atcacgatcg aaattgaccg
      781 atggcgcttc gtctctgatt cgcagcagct ccatccattc aaatcctgag tctttggcgc
      841 gcgatgaaaa tggatttccg aaaccactcg ccgcgctgat gatgtcggcc tggttgactc
      901 ccggaatgct cacgcccccc ggcatgtgaa gggtcgcgat cttttcaaaa ggatttcgag
      961 cgatgcggta ttcgccggtg ccggccggat cgacaaactc aatttctacg tcgttgtgtc
     1021 cggggatgtg gcgataccac catttctcaa aaggataagt cgaggttgca ttaaaacgtt
     1081 cgtgtgaagg cggctgatac gagcctccgc tgggatgcga ttcaatctca tccggcttgc
     1141 cgtacttcag atagatcttt ccgcggtccg ttttgtaacc gggaatgccg gccgtgaagt
     1201 gctcgttcac gtaagcgaat cgctcaaagt aggcttcgcg atactcgttc tcttccgtgt
     1261 cccgatcggt gtcgcgcaga cgccagaact cgaggatgaa ttgctcgcgc tcttcgtcgt
     1321 tacgcagctt gttccaggcg ttcagttctt ccggtctgat gatcggctcg acttcctgga
     1381 gccattgctt gaacgccttg tgtggctccg gcctcacttt gcgcggcttg tcctgcgggt
     1441 cgctgctttt agtagcaggt tgggcgctaa tgttcaccgt cacgaccagc gccgagaaga
     1501 taaggatgat tcgagtggcg aacataactg ctccgtgaag agaagaggtg gataaaataa
     1561 aaccggccct cgatatactc aatcgagagc cggcgtatcg agcctgggct acgggagaat
     1621 cgtaaacttc gccgactgca ccagattctg accgctaacg cgatcccgaa cgcgaacttc
     1681 aactgcgtac tcgccgggat tcaagccgcg cgaatcaacc agccgcgcca gcgtcaggcg
     1741 ctggccagag tcgctgttgc cgcgccaatc ttcgatctgc ttgccaatct ctttgccgtc
     1801 tttcatcagc gcgtactcaa catccaccga aggacgcagc gttgtctgat cgacgccggc
     1861 gttgtaaatc tgcatgtaga cgccgatggg cgaaccgcga tgataggttc ccgaaacgtt
     1921 cgggatgacc ttcacgttgc cgatggtgaa catgccgacg gcgggtttat cgccgaggcc
     1981 ttcaagttta acggcaagga tcagggttga agtggccagc ttgctggggt cgtagcgcgg
     2041 aacttcgaag ccgatgtgac gcacgccggt cgcgcctgag gcgatgtcgc gaacaatcac
     2101 atccacgcga tagcggccag ggctcagtgc cactgccttc tgatacgcgg acttacgttc
     2161 tttcgcttca accaactctt gcgcagtcgc gcgggttatc accgggtctt caaagacgcc
     2221 ggcgcgccga ccggagacgt gcgtaatctt tgcaaagata ttgagttgcg cttgctgcaa
     2281 gccaccgctg tcctggaata ccaggttgtt attgtcggtc tgaatggtaa acgcggtaat
     2341 cacgcgctca tccgactgac ggaaaaagtc cacgcgcacg tcaaagttca gcggattgtc
     2401 ttcaatgacc ggggtgttca ccgcggaagc aagatcgttg aacttgattt gcggcggccg
     2461 ctgcaaatca gtcagcagtt gcaggcgtga aaacggactg tcctgctcac gacgataatt
     2521 ggccgtgcca actccgccca ggccggagat gcgatcgcct ttgtcggaca aacccattga
     2581 ttcggcgagg gtcaagcccg cgccgggtat gtgcagcagc gcatctttct cgtccggatt
     2641 gcgcgcgatg cggtattcgc cgctgcccgt cggatcaacg aattcgatct ctacaccgga
     2701 gccgacgccc gcaatgtatc gatagaacca gcgctcaaaa ggataggtcg aagtcgagcc
     2761 gccgccttca tacgattcgc ggttgtacat gccgcccgac ggatgtgttt ccttctcgtc
     2821 cggcttgccg tacatgatgt ggatccgacc gcgatcagtt ttccaaccgg ggatgcccga
     2881 tgcaaagtgc tcgttcgcgt aggcgatgcg ttcgtaatat tcttcgcggt actcgttttc
     2941 atctgtgtcc ggatcgggat cccgccggcg ccagaattct tcgatgaagt gctcgcgctc
     3001 gtcgtcggtt tcgagcttct taaatgcccg acgctcttcg tcggtgatga tgtaggcgac
     3061 gtccttgtcg agccaggtct tgaatgcctt gtggagctct tccttaacct tgcgcggctt
     3121 ttcggatgga tcctgcggat tcttcggttg ggccgcgagc ggaatggcgg cgaaagctag
     3181 cgcgaggatg gcaacggcca agcggctcga tctgggaaat gacatagcga aatactcctg
     3241 caaaagcccg ggaatgttta agatgctcgt tggtgttgta tcacgagaag cgcggacacg
     3301 gaacgaaagt cgaattctaa gtttcgctct gagcagagtc aagatgcctt aaacccgctg
     3361 aaaagttgcc tttgcggcaa ttctacggag aggcgcggag caacctggaa cgatgctcgt
     3421 aaccattttt cgccggggcg cgtcttaacg gcagacaacc gggactaacg attcaaaaat
     3481 aacggaggat tctgatgaaa aagttaataa ttgcggcagg gctcataacc gccctggcgt
     3541 tggccgcttt cgg
//
LOCUS       DATDBY010000309         5562 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2708141, whole genome shotgun sequence.
ACCESSION   DATDBY010000309 DATDBY010000000
VERSION     DATDBY010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5562
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2708141"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="VIT19_05720"
     CDS             <1..447
                     /locus_tag="VIT19_05720"
                     /inference="COORDINATES: protein motif:HMM:NF016584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_process: GO:0007275 - multicellular organism
                     development [Evidence IEA];
                     GO_process: GO:0030178 - negative regulation of Wnt
                     signaling pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dickkopf N-terminal cysteine-rich
                     domain-containing protein"
                     /protein_id="HEY5838515.1"
                     /translation="SCDKDGLCQCKADTDCTNAYCDDGSASFGKNTCVSLKPSGASCS
                     RDGQCGTGMVCQGKPLGKCIVPASVEIGRPCVRDDECKSGSCSDKRLCQCKDNNDCNN
                     GYCDTGTLGVGGNSCKAFKREGDGCSADKQCGSGLSCKGFPAKCKR"
     gene            complement(526..1902)
                     /gene="hydA"
                     /locus_tag="VIT19_05725"
     CDS             complement(526..1902)
                     /gene="hydA"
                     /locus_tag="VIT19_05725"
                     /EC_number="3.5.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004157 - dihydropyrimidinase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropyrimidinase"
                     /protein_id="HEY5838516.1"
                     /translation="MKTLIQNGQIVTATDNYKADILIDGEIVSVIGAKLDMEADLTID
                     ATDRLVIPGGIDPHTHMELPFGGTTASDDFTTGTIAAAHGGTTTIIDFAVQYKGESLL
                     QGVDNWHKKAEGKCAIDYGFHLITTELEDRQIEEMYTVMDEGVTSFKMFMAYPGVFLV
                     DDATIFRAMSAAGQRGGLICMHAENGIVINEIIKHALAKGHTAPKYHALTRPTVAEAE
                     GVHRAIAIAEMAEAPVYIVHLSCTDALNQVRQARDRGIPAFAETCPQYLFLSIDDYGD
                     GWDGAKYVMTPPLREKSNQDELWKGLKMDDLQVISTDHCPFCMKEQKELGRDDFTKIP
                     NGAPGVEHRVPLIYTGVVENRISLNRFVELTSTAAAKMFGLFPKKGTIAVGSDADIVI
                     FDPNREQTISVKTHHMNVDYSAYEGRKIKGVVETVLSRGSVVIDKGDFKGKSGAGQFL
                     KRGECVAI"
     gene            complement(1907..2188)
                     /locus_tag="VIT19_05730"
     CDS             complement(1907..2188)
                     /locus_tag="VIT19_05730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838517.1"
                     /translation="MEKTVDPGVYQVVFGVHSIQVAKRGDTDSWSNALGHSFSLEIYD
                     EEGTTIEEIRAKDLDETAAEKLKDLYELVRRQALGVEKILDSLLSELAS"
     gene            complement(2249..2401)
                     /locus_tag="VIT19_05735"
     CDS             complement(2249..2401)
                     /locus_tag="VIT19_05735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838518.1"
                     /translation="MEKKVEQFLAGSTGTAPNQAKLNEVVSLQLDRVNDTLAAIKQQI
                     GIEPYG"
     gene            complement(2979..3440)
                     /gene="tnpA"
                     /locus_tag="VIT19_05740"
     CDS             complement(2979..3440)
                     /gene="tnpA"
                     /locus_tag="VIT19_05740"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HEY5838519.1"
                     /translation="MANTFSQIYIQTVFAVSGRESLIKPEFKEELYKYITGIVRNQKQ
                     KLIAINGMPDHVHILIGLRPAMALADLVENIKTDSSKFINRNKWVHGRFSWQEGYGAF
                     SYGHSQMDRVIRYIQDQEKHHQRQSFKSEYMSLLRKFDIGFEEKYVFTFIE"
     gene            complement(3744..4103)
                     /locus_tag="VIT19_05745"
     CDS             complement(3744..4103)
                     /locus_tag="VIT19_05745"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEY5838520.1"
                     /translation="MSGQSKPISVDTGGVIFADGAGAFDVIGRLPLADGYTVTFRNFD
                     VMKQKLQMKQLKFLGSESVTVPAGTFDAYKVEVTSADDEADKQIIWIAKDTNRVLKIT
                     ANLVAFGGAKLTSELTQ"
     gene            complement(4137..>5562)
                     /locus_tag="VIT19_05750"
     CDS             complement(4137..>5562)
                     /locus_tag="VIT19_05750"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEY5838521.1"
                     /translation="NAAFSEVTDEIILTSYEDERERLYFKDKAIEADYKLLQKQLPGK
                     DIGLGSSTKDERLFLISAYSDTEPGERHLFDRNTKKLTFQYRSREKLNRDQLAPMKAV
                     RYKSSDGLEIPAFLTLPKGVPAKNLPVVIMPHGGPWARDSWGYDTFAQFYANRGYAVL
                     QPNFRGSTGYGKKFIDAGNKQWGDKMQDDITWGAKYLIAEGIADPKRIGIMGGSYGGY
                     ATLAGVTFTPDLYAAAVDYVGPSSLITLLESIPAYWEAFRQIFYQRMGDPNTPEGKAQ
                     LERQSPINHANKIKTPLLVVQGQNDPRVTKREADAIVIALRDRGFPVEYINAPDEGHG
                     FAKPVNNMAMIATTEKFLAKFLGGRFQEDVKPEVAARLKEITVDVKTVTLPKKVEATA
                     SAPKPARDLKAGTANYKAKIELGGQSIPLTTTTVIKEDGNNWIVTETADTPQGQLFDS
                     TVVEKGTLIVKHRTIKQGPVEVVL"
BASE COUNT         1176 a         1503 c         1486 g         1397 t
ORIGIN      
        1 tcatgcgaca aggacggtct gtgtcagtgc aaggccgaca ctgattgtac caatgcgtac
       61 tgcgacgacg gctcggcaag cttcggcaag aacacgtgcg tcagcctgaa gccatccggc
      121 gcatcttgct cgcgcgacgg ccagtgcggc acgggcatgg tgtgccaggg caagccgctc
      181 ggcaaatgca tcgtgccggc ttcagtggag atcggcaggc catgcgtgcg cgacgacgag
      241 tgcaagtctg gatcctgcag cgacaaacgc ctctgccagt gcaaggacaa caacgattgc
      301 aataatggct attgcgacac gggcacgctg ggggtcggtg gtaattcttg caaggcattc
      361 aaacgggaag gggatgggtg ctcggccgac aagcaatgcg gctcgggcct ctcgtgtaag
      421 ggtttccccg ccaaatgcaa gcgttagcgc gatgccgcta cgctggttgg gtggggcaag
      481 cgaattgata gcgcaggtcg aaatggtgtc agcctgaatg caaaatcaga ttgccacaca
      541 ctcgccgcgt tttagaaact gccccgcccc ggacttgcct ttgaaatcgc ctttgtcgat
      601 tacgactgaa ccgcgtgaaa gaacggtttc gacgacacct ttgattttcc ggccttcgta
      661 ggcgctgtaa tcgacgttca tgtgatgagt cttcacgctg atcgtctgtt ctctattagg
      721 atcgaaaatt acgatgtccg catccgagcc caccgcgatt gtgcctttct tcggaaagag
      781 cccgaacatt ttggcggcgg cggtcgaggt cagctcaaca aaacgattca gcgagatgcg
      841 attctccacg acgccggtgt aaatcagcgg gacgcgatgt tcgacgccgg gcgcgccgtt
      901 cggaattttg gtgaagtcat ccctgccgag ctccttctgc tctttcatgc agaacggaca
      961 gtggtcggtt gagatgactt gcagatcatc catcttcaga cctttccaaa gctcgtcctg
     1021 atttgatttc tcgcgcagcg gcggcgtcat cacgtacttc gcgccgtccc agccatcacc
     1081 gtaatcatcg attgaaagga agagatactg cgggcaggtt tcggcaaacg cgggaatgcc
     1141 gcgatcgcgc gcctggcgca cttgattcaa agcatccgtg cacgacaagt gaacgatgta
     1201 aaccggcgcc tcggccatct ccgcaatcgc aatcgcgcga tgcacgcctt cagcttcggc
     1261 gacggtcggg cgagtgagcg cgtggtactt cggcgcggtg tgacccttgg ccagcgcatg
     1321 cttgatgatc tcgttgatga cgatgccgtt ctcggcgtgc atgcaaatca gcccgccgcg
     1381 ttggcccgcc gcggacatcg cgcgaaagat cgtcgcgtca tcgaccagga acacgccggg
     1441 ataagccatg aacatcttga agctggtcac gccttcgtcc atgaccgtat acatttcttc
     1501 aatctgacgg tcctcgagtt cagtcgtgat caagtgaaag ccgtaatcga tcgcgcactt
     1561 gccctcggct ttcttgtgcc aattgtccac gccctgaagc agcgactcgc ctttgtactg
     1621 cacggcaaag tcgataatgg tcgttgtgcc gccgtgcgcc gccgcgatcg tgccggtagt
     1681 gaagtcgtca gaggccgtcg tgcccccgaa cggcaactcc atgtgcgtgt gcggatcgat
     1741 gccgccggga atgacaagcc ggtctgtcgc gtcgatcgtc aggtcagctt ccatgtccag
     1801 ctttgccccg atgacggaaa caatttcgcc gtcaatcaga atgtcggctt tgtaattgtc
     1861 ggttgcggtt acgatttggc cgttttggat tagagttttc atggagttaa cttgccagct
     1921 cagaaagtaa tgaatctagt atcttttcaa ctcccagtgc ttgtcttcga acaagttcgt
     1981 acagatcttt aagcttttct gccgcggttt cgtcaagatc ttttgccctg atttcctcaa
     2041 tcgttgtccc ctcttcgtca tagatctcca gcgaaaagct atgaccaagg gcgttgctcc
     2101 aactatcagt atccccgcgc ttggctactt gaatggaatg gacgccaaag acgacttggt
     2161 atacaccagg atctacggtc ttttccaaac gagcttgttg ttagacgttc tctcatgtag
     2221 gcgttcgacc agaatctcgc ttttcgattt agccataagg ttcaattcct atctgttgtt
     2281 taattgcggc gagcgtgtcg ttcacacggt ctagctgcaa tgagacaact tcattcagtt
     2341 tcgcttggtt cggggcggtt ccggttgaac ccgccaagaa ctgttctacc ttcttttcca
     2401 ttgtagtgaa tgctgaacag ccgacagtaa agcctccctg tgttcagtcg gaatgtttgg
     2461 gcttgatgcc cttatcgaaa ttaggagttg ctttaccgat gagtatcggt cgggcaagat
     2521 tggccacgca ttaaccctat gcaggcgctt tatctcttcc attattgtta tcactgctgc
     2581 aagctccatt atcgtatctg atcgcacgat cgctttcttt acttctttgg cagctgcctc
     2641 cgctcgctga gcagcgctct tcgaacttag gacggcaatg attgtagcta tgaagccgac
     2701 aatggagatg aacaacccgg cgacattagc cagatcgccc cagcgttcgg tgagtaattt
     2761 ggtgagcgtg tccactctag gcgttcgctc cgttaggagc gagatgtcta tagaaccacg
     2821 taccgaacaa atcaacaagg ctcctttagg agcggaatgt aaacccgatt cacattccgc
     2881 tcctaaagga gctaactgat ccagcggtac ttgggttcta taaacattgc gcccctagcg
     2941 gggcttcaat cgccatcgtc tgacgtgaat cactcacatc actcgataaa cgtgaagacg
     3001 tacttttctt cgaatccaat atcgaatttc ctcaacagcg acatatattc gctcttaaag
     3061 gattgccgct gatggtgttt ctcttgatct tgaatgtaac ggatgacgcg atccatttgg
     3121 gaatgcccgt aagaaaacgc tccatatcct tcctgccaac tgaatcggcc gtgaacccat
     3181 ttatttcggt tgatgaactt cgatgagtcg gtcttgatgt tctcgaccaa atccgctaac
     3241 gccatcgcag gcctcagccc gatcaagatg tgaacatgat ccggcattcc gtttatcgct
     3301 atcagttttt gcttctgatt gcgaacgatg ccggtgatgt acttgtagag ttcctctttg
     3361 aattctggtt tgatgagcga ttctctgccg ctaacagcga agacagtttg aatgtagatt
     3421 tgagagaagg tgttggccat gggacctcgg atcgcttgag agtcggtgga gcgagacact
     3481 ataaacattt cgctcctacg gagcgacgaa aagtgtggac tatcggtttc tataaacatc
     3541 tcgctcctga cggagcgaag caaagacgcc tttcacgcat aagacatcca gagacgaaag
     3601 ccgcctgaac cgtttttgaa attctctatt tatctgatcg gaagattcag gtgcaatgac
     3661 aaaaacatgg caactgggaa gacaaaaaaa tggcggctgg gagctatcca gccgccttga
     3721 gattctctag tcgattactt tagctactgc gttaactcag acgttagctt tgcgccgcca
     3781 aacgccacca ggtttgcggt gatcttcagg actctgtttg tgtccttggc aatccagatg
     3841 atctgcttgt cggcttcatc gtccgctgaa gtgacctcga ccttgtaagc gtcgaacgtg
     3901 ccggccggaa ccgtcactga ttcactgccc aggaacttca gctgcttcat ttgcagtttc
     3961 tgcttcatca cgtcgaagtt tcggaacgtc accgtgtagc catcggccag gggtagccgc
     4021 ccgatgacgt cgaatgcgcc ggcgccgtca gcgaagatta caccaccggt gtcgacggaa
     4081 atcggcttcg actggccgct catggtcatg gtgccggtcg ctttgttgtc tttgaattac
     4141 aacacgactt caaccggtcc ctgcttgatc gtgcgatgct taacaatcaa ggtgcccttt
     4201 tccacgacgg tcgagtcgaa gagttggccc tgcggcgtgt cagcagtctc agtcacaatc
     4261 cagttgtttc cgtcttcctt gatgaccgtc gttgtggtca agggaatcga ctggccgcca
     4321 agttcgatct tggctttata gttggccgtg cccgctttca ggtcgcgtgc gggtttcggc
     4381 gcactcgcgg tggcctcaac cttctttggc agcgtcacag tcttcacatc aaccgtgatt
     4441 tctttcaagc gcgcggccac ttccggcttc acgtcttcct gaaaacgacc gccgaggaac
     4501 ttcgcaagga acttctcagt cgtggcgatc atcgccatgt tgttgactgg ctttgcgaat
     4561 ccgtggcctt cgtcaggcgc gttgatgtat tcgacaggga atcctcgatc gcgcagagcg
     4621 atcacgattg cgtctgcttc gcgcttcgtc acacgcggat cgttctggcc ctgcacaacc
     4681 agcagcggag tcttaatctt gttcgcgtgg ttaatcggcg attgccgctc aagctgcgct
     4741 ttgccctccg gcgtgtttgg atcgcccatg cgctggtaga aaatttgccg aaaggcttcc
     4801 cagtaagcgg gaatcgattc aagcagcgtg atcaggcttg aagggccaac gtaatcaact
     4861 gcggctgcgt acaggtcagg tgtgaaagtg acgccggcga gcgtcgcgta accgccgtac
     4921 gaaccaccca taatgccgat gcgctttgga tcagcgatgc cttcggcgat cagatatttc
     4981 gcgccccagg tgatatcgtc ctgcattttg tcgccccact gtttattgcc ggcgtcgatg
     5041 aactttttgc cgtaaccagt cgagccacgg aagttgggtt gcaacacggc atacccgcgg
     5101 ttcgcgtaga actgcgcgaa agtatcatag ccccacgagt cgcgcgccca cggcccaccg
     5161 tgcggcatga tgaccaccgg aagattcttg gccgggacgc ctttcggcag agtaagaaac
     5221 gcaggaatct cgaggccgtc cgaagattta taacgaacgg ctttcattgg ggcgagctga
     5281 tcgcgattca gcttttcgcg acttcgatac tggaaagtga gttttttcgt gttccggtcg
     5341 aacaagtgac gctcaccggg ttctgtgtcg ctgtacgcgc tgatcaggaa aaggcgctcg
     5401 tctttggtgg aagatccgag gccgatgtct ttgccgggca gttgcttctg caacagtttg
     5461 taatcggctt cgatcgcctt gtccttaaag tacaaacgtt cgcgctcgtc ttcgtaagaa
     5521 gtcagaatta tctcgtccgt gacttccgag aaggccgcgt tg
//
LOCUS       DATDBY010000310         3555 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2067734, whole genome shotgun sequence.
ACCESSION   DATDBY010000310 DATDBY010000000
VERSION     DATDBY010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3555
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2067734"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..378)
                     /locus_tag="VIT19_05755"
     CDS             complement(13..378)
                     /locus_tag="VIT19_05755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838522.1"
                     /translation="MAESNNNEVIGFIASTVETILNRLNAVEEHMATKDDLARLDGRL
                     NERLGGLDGRLSERIEVATTSIRGDIEQIHLRLDSLDHRISSRDEHFDAEISRLRSAV
                     YVLGKDRPDVLRLLGYQTP"
     gene            complement(437..1180)
                     /locus_tag="VIT19_05760"
     CDS             complement(437..1180)
                     /locus_tag="VIT19_05760"
                     /inference="COORDINATES: protein motif:HMM:NF001030.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEY5838523.1"
                     /translation="MSGHSKWHSIKHKKGATDAKRGKLFTKFIKELTVAARTGGGDPD
                     ANARLRKAISDAKAGNMPNDTIDRAIRRGTGEEEGVTYDELTYEGYGPGGVALLIEAM
                     TDNRNRTVAEIRHMFSKNGGNLGESGSVGWMFEKKGYLVVDKTAKPEDELFDLAIEAG
                     AEDIRDDEDNWEIITAPDNFEAVQNALKSAGITPQVAEVEMLPQNYIKLEGAQANQMV
                     KLMESLEDHDDVQKVSANFDISSADMAAA"
     gene            complement(1260..>3555)
                     /locus_tag="VIT19_05765"
     CDS             complement(1260..>3555)
                     /locus_tag="VIT19_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838524.1"
                     /translation="MGETKTDVIVAIAKSEPSPLARFAPGLPPEFEWVVMKALRKSTD
                     ERYQTIKELESDLKKLKQKVVFQTELERSMGPDRLTGAITPFGDTEVPHHSSHLSFQP
                     SVPSTMHSTSTVQSAAQTRASSVEYIFDGIKRHKLKAAMVAVAAMVVAAGIWYFGFRK
                     PTTALTDKDRILLADFVNTTDDTVFDVTLKQALATQLRQSPFLDILSEDRVRDALKFM
                     EKSPDEPVNREIALEICRRQGIAAALIGTISSVGSRYVITLEALNAESGDTIASDQAE
                     AKNKEEVLRSLGDAATRLREKLGETLSSIQKYDAPIEQVTTSKLEALRYYSVGFQQHS
                     RGRYTDAIPLYEHAIQVDQRFAMAYARLAACYNSLKQFELSRAASAKAYEYRDRASER
                     EKLYVEWNYYGAVTGEIERQTEALDVWKQTFPRDWEPHHLLAVRYTLTGPFKNGVDEA
                     SEAVRLNEREPKVHANLANAFIGQNRFDEGKKVLQNALGKNMETESMHTHLYRLAFVS
                     GDATGMNEQVVWAAKNSGFLANVYQAEAAEFYGKYADANQFSNKAVDWAEHNNKDAAA
                     QLISKQAMRAATFRDCGKINALTAKSLSYSRDLSNLEHSANALAACGQAPAAQSLVDE
                     MQKRFPKDTLLNNVWIPLIRAQLELARGDAGQAIPLLENTRKYEVYGDYWPQYVRAQA
                     YLKQGNGAQAANEFKYILDHRGWYPLSPIHALAQLGYAQASARSNDTATARKAYQDFF
                     YLWKDADATLPVIAEARQEYDKLK"
BASE COUNT          694 a         1010 c          980 g          871 t
ORIGIN      
        1 agttttcgta aattaagggg tttggtagcc gagaagccgg agcacatcgg gacgatcttt
       61 gccgagaacg tagaccgcgc tacgcaggcg agagatttca gcgtcgaaat gctcgtccct
      121 ggaagagatg cgatgatcca acgagtcgag ccgcaaatgt atctgttcaa tgtcgccacg
      181 aattgaggtc gtcgcgactt caatcctttc gctcaagcgg ccgtcgagac ccccgagtct
      241 ttcattcagc cggccatcga gccgcgccaa atcgtccttc gtcgccatgt gttcttcgac
      301 cgcattcagg cgattgagga tagtttcgac cgtgctagcg atgaaaccaa ttacttcgtt
      361 gttattcgac tcagccactg ttggcgatga tcctaacatg gaaactaatc gttatccggc
      421 gcaaataatt gccaatctaa gccgccgcca tgtcggccga gctgatatca aagttcgctg
      481 agaccttctg tacatcgtcg tggtcttcga gcgattccat gagcttgacc atctgatttg
      541 cctgggcgcc ttcaagcttg atgtagttct gcgggagcat ctcgacttcg gccacctgcg
      601 gcgtaattcc ggctgacttg agtgcgttct gaactgcttc gaaattgtcg ggcgcggtga
      661 tgatttccca gttgtcttcg tcgtcgcgga tatcttcggc gccggcttcg atcgcaagat
      721 cgaacagttc atcttcgggc tttgcggttt tatcaaccac caggtagccc ttcttctcga
      781 acatccaacc gactgagccc gactcgccca ggttgccgcc gttttttgaa aacatgtggc
      841 ggatttccgc caccgtgcga ttgcgattgt cggtcattgc ttcgattaac agcgcgacgc
      901 cgccgggacc atagccctcg taggtgagtt cgtcgtaggt gacgccttct tcttcgcctg
      961 tgccgcggcg aatcgcgcgg tcgatcgtat cgttcggcat gttgccggct ttcgcgtcgg
     1021 agatcgcttt gcgcaagcgc gcgtttgcgt ccggatcgcc gccgccggtg cgcgccgcca
     1081 cagtcagttc cttgatgaat ttggtgaaaa gcttgccgcg cttggcgtcg gtcgcgccct
     1141 tcttgtgctt aatcgaatgc cacttcgaat gtcccgacat ggaaagagat ccttattgag
     1201 ttggtttgat taagggcgaa ctatatcacg cgagctgcgc gtcgaggtag caggcgaaac
     1261 tacttcaact tatcgtattc ctggcgcgct tcggcgatga caggcaacgt cgcatcagca
     1321 tctttccaca ggtagaaaaa gtcctgatag gccttccgag ctgtggcagt gtcgttactt
     1381 cgcgccgaag cctgagcgta gcccagttgc gccaaagcat gaatcggcga gaggggatac
     1441 catccgcgat gatcgaggat gtacttgaat tcgtttgccg cttgcgcgcc gttcccctgt
     1501 ttcaagtagg cttgggcgcg aacgtactgc ggccaataat ctccgtacac ttcgtacttc
     1561 cgagtatttt cgagcagcgg gatcgcctgc ccagcgtcac ctcgcgccag ctcaagctgc
     1621 gcgcgaatca gcgggatcca cacgttgttg agcagcgtat ctttcggaaa tcgcttttgc
     1681 atctcgtcca ccagtgattg ggccgcgggc gcttgtccgc aggcggccaa tgcatttgcc
     1741 gagtgctcca gattcgagag gtcgcgggaa tacgacaagg atttggcagt aagcgcgttt
     1801 atttttccgc aatcgcggaa tgtggccgcg cgcatagcct gcttagaaat tagctgggca
     1861 gccgcgtcct tgttattgtg ttcggcccag tcaaccgcct tgttgctgaa ctgattcgcg
     1921 tcggcatact tgccgtagaa ctccgccgct tcagcctgat agacgttcgc caggaatccc
     1981 gaattcttcg cagcccaaac aacctgctcg ttcattcccg tcgcatcgcc gctcacgaac
     2041 gcgagccggt agagatgcgt gtgcatcgac tcggtttcca tgtttttacc gagggcgttc
     2101 tgcaaaacct tctttccctc atcaaaccga ttctggccga taaacgcgtt tgccaggttg
     2161 gcgtgcacct ttggttccct ctcatttaag cgcaccgctt cactcgcttc atcgacacca
     2221 ttcttgaatg ggccggtcag cgtgtagcgc acggcgagca gatggtgcgg ctcccagtca
     2281 cgcggaaagg tttgcttcca aacgtccagg gcttctgtct gcctctcgat ctcgccggta
     2341 actgcgccgt agtagttcca ctcaacatag agtttttcgc gttcactcgc gcgatcgcga
     2401 tactcgtacg ctttggcgga agcggctcgc gatagttcga actgcttcag agagttgtag
     2461 cacgcggcca ggcgcgcgta cgccatggca aaccgctgat cgacttgaat cgcatgttca
     2521 taaagcggaa ttgcgtcggt gtagcggccg cgagaatgtt gctggaaacc gacggagtaa
     2581 taccgcaatg cttccagctt cgaggttgtc acctgctcga ttggcgcgtc atatttctga
     2641 attgatgaaa gcgtctcgcc aagtttttcg cgcaggcgcg tcgcggcatc gccaagcgac
     2701 cgcaacacct cctctttgtt tttggcctca gcctgatccg acgctatggt gtcgccgctc
     2761 tccgcattca aagcttcaag cgtaattaca taacgacttc cgacgctgga aatagttccg
     2821 atgagcgccg cggcgatacc ctggcgccgg cagatctcaa gagcgatttc acggttcacg
     2881 ggctcgtccg gagacttctc cataaacttc agcgcatcac gcacgcgatc ttcagacaga
     2941 atgtcgagaa acggcgattg ccgcagttgc gtggccagcg cttgctttag ggtcacgtcg
     3001 aaaaccgtgt cgtctgtggt gttaacaaaa tccgccagga ggatcctgtc tttgtcagtc
     3061 aacgctgtcg tcggcttacg aaaaccgaag taccagatac cagcggcgac caccatggcg
     3121 gcaactgcga ccatcgctgc cttgagcttg tgccgcttaa tgccatcaaa aatgtattca
     3181 acgctcgacg cgcgcgtttg cgcggcgctt tggacggtgc tggttgagtg catcgtcgac
     3241 gggaccgacg gttgaaagct caggtgcgac gagtggtgcg gcacttccgt gtcaccgaag
     3301 ggggtgatcg cgccggtgag acggtcggga cccatagagc gttccaactc tgtctgaaag
     3361 accactttct gtttgagctt tttgagatca gactcgagtt ccttgatcgt ctgataccgc
     3421 tcgtcggtgc ttttgcgaag cgctttcatt accacccact cgaactcagg cggaagtccg
     3481 ggcgcgaagc gggcaagcgg cgaaggctca ctcttggcaa tcgctacgat gacatcggtt
     3541 ttcgtttcgc ccatg
//
LOCUS       DATDBY010000311         2969 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_885469, whole genome shotgun sequence.
ACCESSION   DATDBY010000311 DATDBY010000000
VERSION     DATDBY010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2969
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_885469"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VIT19_05770"
     CDS             <1..430
                     /locus_tag="VIT19_05770"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEY5838525.1"
                     /translation="FAFFFLLLRHSKARQVNRAVSTIYGNLLVVLICAPAFFGAVKQG
                     IAPADFAAVAYLGIIQIGFAYLLFTSAMARGVRSLDAGIIGYIEPVLNPIWVFMFIGE
                     RPAGWAIVGGGIIIASVIAHMLSEARRKRKTVTPDLVAHE"
     gene            complement(445..1092)
                     /locus_tag="VIT19_05775"
     CDS             complement(445..1092)
                     /locus_tag="VIT19_05775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838526.1"
                     /translation="MKHKPAKEAFTNKEWNLIQRLNTPAKVQRWLTRMPYNWERQGGT
                     MRSFREVVKRKEAHCLEAAVAAAVILEQHGYPPLLFDVESIDLLDHVLFVFQEKGRWG
                     SIARSRDIGLQGRKPVFRSLRELVWSYFDPYIDMTGRIKGYGLTSLYDLGNYDWRFNA
                     RNMHKIEDHLRAIPHQKLRSSDRRYEYWHERYQKYKKRFPDRSPSYYDNRNQWML"
     gene            1384..>2969
                     /locus_tag="VIT19_05780"
     CDS             1384..>2969
                     /locus_tag="VIT19_05780"
                     /EC_number="4.1.1.32"
                     /inference="COORDINATES: protein motif:HMM:NF003253.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004611 - phosphoenolpyruvate
                     carboxykinase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0017076 - purine nucleotide binding
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (GTP)"
                     /protein_id="HEY5838527.1"
                     /translation="MSSPVTKTSIKRDPSKPLSTNVHLLNWVEKMANLTKPAGIHWVD
                     GSVEEDEQLKAEMVASGTFIKLNEELWPGCYYARSHPSDVARVEDRTYICSLSKDAAG
                     PTNNWEEPFQMRRKLKELFDGSMVGRTMYVLPFSMGPIGSPMAQIGVQLTDSPYVVVN
                     MRIMARMGMPVYAEIDKDYKRVVPCMHSVGAPLAHGETDVPWPCNTEKYIVHFPETRE
                     IWSFGSGYGGNALLGKKCFALRIASNIARDEGWMAEHMLIVGVENPEGEKTYVTAAFP
                     SACGKTNFAMLIPPAGFEDWKVYTVGDDIAWIKPDSEGCLRAINPEAGFFGVAPGTSE
                     KTNPNAMKTLATNSIFTNVALTPEGGVWWEGMTDEPPAECTDWQGNKWTPAIAKESGA
                     KAAHPNARFTAPASQCPTIDPDWENPNGVPISAIIFGGRRATTMPLVYQTFNWTSGVY
                     TGATMGSEMTAAAFGAIGKVRRDPMAMLPFCGYHMGDYFRHWIRMQRSLSETPRIFHV
                     NWFRKDKDGNFLWPGFSENMR"
BASE COUNT          625 a          838 c          857 g          649 t
ORIGIN      
        1 tttcgccttc ttctttctgc tgttgcggca ttcgaaagcg cgtcaggtca accgggccgt
       61 ctcaacgatc tatggcaacc tgctggttgt tctaatttgc gcgccggcat ttttcggcgc
      121 agtgaagcaa gggatagccc cggctgattt tgcagccgtc gcgtatctgg ggattatcca
      181 gattggtttc gcttaccttt tgttcacatc ggcaatggcg cgcggggtgc gctcgctcga
      241 cgccggcatc atcggctaca tcgagccggt gctgaatccg atttgggtgt tcatgttcat
      301 cggagagcga ccagcgggct gggcgattgt gggaggcggg atcatcatcg catcagtgat
      361 cgctcacatg ttgagtgaag cccggcgcaa acgaaaaacc gtcacccctg atttggtcgc
      421 gcacgagtga gcagcgcaaa gcattcacag catccactga tttcgattgt cgtagtaaga
      481 aggcgatcga tcggggaatc gctttttgta cttctggtac cgttcgtgcc agtactcgta
      541 gcggcgatcg gatgagcgaa gcttctggtg cggaattgca cgcaggtgat cttcaatctt
      601 gtgcatgttc cgcgcgttga agcgccagtc gtagttgccg agatcgtaga ggctcgtcaa
      661 gccataccct tttatccggc cagtcatgtc gatgtacgga tcgaaatagc tccaaaccag
      721 ttcgcgcaga cttcgaaaaa ccggcttgcg tccctgcaaa ccgatgtcgc gtgaacgcgc
      781 aatcgatccc catcgcccct tttcctgaaa gacgaagagt acgtggtcga gcaaatcgat
      841 cgattcgaca tcgaacaaca aaggcggata accgtgctgc tcgagaatga ctgcggcggc
      901 gaccgcggcc tctaaacaat gcgcttcctt tcgtttgacg acttcgcgaa acgaacgcat
      961 cgtgccgccc tgccgttccc agttgtaagg catgcgggtc agccagcgct gcaccttcgc
     1021 cggcgtgttg aggcgctgga tcagattcca ctctttattg gtgaaggctt cttttgctgg
     1081 tttatgtttc attgcctcta tgaggtcagt accgagagcg gtagtgaccg ggcatacaac
     1141 tttctttact tgatggtcat gcgatcatcg acgccgtgtg gaacgacacg gacataccgc
     1201 taggatacct aattaccttc cgatgttatg gcacctggct ccacggtgac gaacgcgggt
     1261 cctaacacaa ccatcctctc cctgacggtc cggcttctga cacgcttgcg tccttgtggt
     1321 tgctgatgtc acacttacgc ttaattattt cagcccgcaa ttcatcacag atcggagtca
     1381 ctgatgagtt ctccagttac caaaacgtcg atcaaacgcg acccttcaaa gccgctcagc
     1441 accaacgttc atctgctcaa ttgggtcgaa aagatggcga acctgaccaa gcccgccggc
     1501 attcattggg tcgatggctc ggtcgaagaa gacgagcagc tgaaggccga aatggtcgcg
     1561 tccggcacgt ttatcaagct gaacgaagag ctttggcctg gctgttacta cgcgcgctcg
     1621 cacccgtcag acgtcgcgcg cgtcgaagac cgcacctata tttgctcgct gtcgaaagac
     1681 gccgcgggtc cgaccaacaa ttgggaagag ccgtttcaga tgcgacggaa gctgaaggaa
     1741 ctatttgatg gatccatggt cggccggaca atgtacgtgt tgccgttcag catgggccca
     1801 atcggttcgc ccatggcaca gattggcgtg cagctcactg actcgcctta cgtggtcgtg
     1861 aacatgcgca tcatggcgcg catgggcatg ccggtgtacg ccgagatcga caaagattac
     1921 aaacgcgtcg tgccgtgcat gcactcggtc ggcgcgccgc tcgcgcacgg cgagaccgac
     1981 gtgccctggc cctgcaacac tgaaaagtac atcgttcatt tccccgagac gcgcgagatt
     2041 tggtcgttcg ggtcgggtta tggcggtaac gctctgctcg gcaagaagtg cttcgctttg
     2101 cgcatcgctt caaacatcgc gcgcgatgaa ggctggatgg ccgagcacat gctgattgtc
     2161 ggcgtcgaga atcccgaagg cgagaagact tatgtcaccg ccgcgttccc cagcgcctgt
     2221 ggcaagacga acttcgcgat gctgatcccg ccggcgggat tcgaagactg gaaggtttat
     2281 accgtgggcg acgacatcgc ctggatcaag ccggactctg aagggtgcct gcgcgcaatc
     2341 aacccggaag cgggtttctt cggcgtcgcg ccgggcactt cggagaagac gaatccgaac
     2401 gcaatgaaga cgctcgcgac aaactcaatc ttcacgaacg tcgcactgac gcctgaaggc
     2461 ggcgtctggt gggaaggcat gacggacgag ccgccggcag agtgcaccga ctggcaaggc
     2521 aataagtgga cgcctgcgat tgcgaaagag agcggcgcga aagctgcgca tccgaacgcg
     2581 cgcttcactg cgcccgcttc acaatgtccg acgatcgatc cggactggga gaaccccaat
     2641 ggcgtcccga tcagcgcgat cattttcggc ggacgccgcg cgacgacgat gccgttggtc
     2701 tatcaaacgt tcaactggac ttccggcgtt tataccggcg cgacgatggg ctcagaaatg
     2761 accgcggcgg ctttcggcgc aatcggcaaa gttcgtcgtg acccgatggc gatgttgccg
     2821 ttttgcggct atcacatggg cgattacttc cgtcattgga ttcgaatgca gcgctcgctg
     2881 agcgaaacgc cgcgcatctt tcacgtgaac tggttccgca aagacaaaga cggcaatttc
     2941 ctttggccgg gcttcagcga gaacatgcg
//
LOCUS       DATDBY010000312         4836 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2474402, whole genome shotgun sequence.
ACCESSION   DATDBY010000312 DATDBY010000000
VERSION     DATDBY010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4836
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2474402"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..504
                     /locus_tag="VIT19_05785"
     CDS             <1..504
                     /locus_tag="VIT19_05785"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5838528.1"
                     /translation="AGSTAIWDAVWTTSNEILRDSAEHTRRAIILLTDGQDTTSQMHL
                     RDAIDSAVKVDALVYAIGIGDRYSYGIDEGSLKKITEATGGRAYFPRNERELRDAFAQ
                     IQRDLREQYLIAYSSSNKGRDGAYRRVNIEITNPDLQKQALKLIYRPGYFAKSPGTPA
                     PKSAQKP"
     gene            642..>4836
                     /locus_tag="VIT19_05790"
     CDS             642..>4836
                     /locus_tag="VIT19_05790"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY5838529.1"
                     /translation="MPTHPENPATILVVKDDLQVLELLVDLLEPEGYQVLSATSAKRA
                     LEVTATVRADLILCDVVMPEMNGLELCHRLKSDPETASIPVMMVSAVSKEEAARLEGY
                     TAGADDYVEIPFRHEELLIKVARLIERNRAQQELKKSEEEYRLLFKGNPCPMWLCDQK
                     TLQFLAVNDAAIGHYGYNRAEFLSMTVKDIRPSEDVPALMEYVTTSKLPSASAGVWQH
                     RKKDGALIDVDVTWHKVEFSGHPSFLVLANDITEKRKSETALRESEQRYREIFDNAND
                     LIYTHDLTGNFTSLNETGEQITGYSKTEALSMNFAQVIVPEQVDLARQMLGRKLHSDD
                     AATVYELDITSKDGRRMTLELSTRLIYRDGKGVGVQGIGRDVTERKRAQAELLRRNQE
                     LATLNEISHELSKLGEPAEIAQKIHALIGKVLDNRNLYVALYDSQKGEVSFPAYTIDG
                     QPYHAPTRKLGLGLTEYVINTKQPLHIKRDLEGALRKLGLQLSGRSAQCWLAVPMLVG
                     EKVVGVITIQDYERPEAYDQEHLDLLRTIAAHAAIVVENARLYAAMKRHADRVALTNR
                     ISQAVRCTLDVSEVFATAVRELGSHFNVDRCSLFMKDTRAGRGTNVAEYHRPGVGPAA
                     HDFDLSQVNGLTAAMDRFGVLAFDNVAEDERIRDLYERMLKQFNVKSIMYVGVTVGNE
                     LLGAFALSTTRQTRQWSETDVEIARSVADQTGIAIRQAWLYEKAEATSAREALVNKLG
                     GAIRSSLSLPDVLDTTVRELGKALSASRVQVRLCDGANHELYVKTEYTADGRQTEGKF
                     DGYYDQLLRDHFRDSTKSLVIPNLHEFTSDDAKLTDGVAFHAREQGLQSMLVSPLTVN
                     NKFRGVICIEQTDTVRHWTEDEVLLVQSVGVELATVIAQAELFQIVARAKNEWETTFD
                     AMSDGVFIFDPAGKLIRVNKAGAAMDSEAPQSILGRKCCEILRADSDELECIVERSLR
                     EAQSVNLEIVPHKLKRPVLVTVEPVFDSGQVVAAVCTARDLSELRNVEAVARERQSLL
                     KNILESAREAIYALDLNGHYQWCNTAMLDLTGYEMRELIGCYFLENVHDADRDMRRAR
                     FETVLNGEPQSFESRYVTRDGTVRHALVNTAPIVVDGQTTGVLGIAHDITEQKQERER
                     AGRADKLRALGQLASGVAHDFNNSLAAILGRAQLILRRAHDEELIRSLGVIMTAAEDA
                     AATVRRIQTFARKSSAAEMELLDISSLLRDAVEITRTRWQNEARAAGRSIEVVLNADE
                     RFFTRGNASELREVFVNLIVNAVDAMPDGGTLTLCCKREGERLKLRFADTGLGMEEEV
                     RERVFEPFYTTKGVHGTGLGLAVSYGIIERHYGTISVSSKLGEGTTFHIDLPFDDTSE
                     PKALSEKVNAETSTSLSVLV"
BASE COUNT         1099 a         1337 c         1419 g          981 t
ORIGIN      
        1 gcgggctcaa ccgctatttg ggacgcggtg tggaccactt caaatgaaat tctccgcgat
       61 tcagccgagc atacacggcg ggcgatcatt ctgctgaccg acggccagga caccaccagc
      121 cagatgcact tgcgtgacgc gatcgacagc gccgtcaaag ttgacgcgtt ggtctatgcg
      181 attggaatcg gagaccgcta ctcgtacgga atcgatgaag gctcgttaaa gaagatcacc
      241 gaggccaccg gaggtcgcgc gtactttccg cgtaacgaac gcgaacttcg cgatgctttc
      301 gcccagattc agcgggacct gcgcgaacag tatctgattg cttactcgtc ttcgaataag
      361 ggtcgcgacg gcgcttatcg gcgtgtaaac attgagatta ctaacccgga tctgcaaaag
      421 caggcactga aactcatcta tcgtcccggc tatttcgcca aatcaccggg gactcccgcg
      481 ccaaaaagcg cacaaaagcc ctgaactcgc ctcaaatgtg ctagtgacaa acctgtttta
      541 gcattgctat actggtttgg ccttgacctg ccccgtcttg gcccagcctc gctagcccag
      601 tcatttcgcg cagtcccgtc accgtcactg gcctcgccgt catgccaaca cacccggaaa
      661 atcccgcaac cattctcgtc gtcaaagacg atctgcaagt acttgagctg ctggtggatc
      721 tgcttgagcc cgagggctat caggtcttgt ccgcgacctc ggcgaaacgc gcgctcgaag
      781 ttacggcaac tgtgcgcgcg gacctgattc tgtgcgatgt ggtcatgccc gagatgaatg
      841 gtctcgaatt gtgccaccgg ctaaagtccg atccggagac ggcatcgata ccggtgatga
      901 tggttagcgc tgtcagtaaa gaggaggcag cgcgcctgga gggttacacg gcgggcgctg
      961 acgactacgt cgaaattcct tttcgccatg aagagctgtt gatcaaggta gcgcggctga
     1021 tcgagcggaa tcgcgcgcag caggagctaa agaaatcgga agaagaatat cgtctcctgt
     1081 tcaagggcaa cccttgtccg atgtggttgt gtgaccagaa gacgctacag ttcctcgccg
     1141 tcaacgatgc ggccattggg cactatgggt acaaccgcgc agagttcctc tcgatgaccg
     1201 tcaaagacat tcgtccgtct gaggacgtgc cggctttgat ggagtacgta accacgagca
     1261 aattaccgag cgcaagcgcc ggagtgtggc agcatcgcaa gaaagacggc gcgctcatcg
     1321 atgtcgatgt cacgtggcac aaagtcgaat tcagtggcca tccgtccttc ctggttctcg
     1381 caaacgacat aacggaaaag agaaagtcgg aaacagcttt gcgcgaaagt gaacagcgct
     1441 atcgcgaaat tttcgacaac gccaacgacc tgatttacac gcacgatctg accggcaact
     1501 tcacttcact taacgagacg ggcgaacaaa tcaccggtta ctcaaaaacc gaagccttga
     1561 gcatgaactt cgcacaggtc atcgtgcctg aacaggttga tcttgcgcgg cagatgttgg
     1621 ggcggaagct gcacagcgat gatgcggcga ctgtttatga actcgacatc acttccaaag
     1681 acggccggcg catgaccctc gagttaagta cgcggttgat atatcgcgac ggtaagggcg
     1741 tgggcgtgca gggaatcgga cgtgacgtca ctgagcgaaa acgcgcacag gcggaactgc
     1801 tgcggcgcaa ccaggaactg gcaacgctga acgagatctc gcacgaactc agcaagctgg
     1861 gcgagccggc agagattgca cagaagattc acgccttgat cggcaaggtg ctcgacaatc
     1921 gcaatttgta cgtcgcgctg tacgactcac aaaagggcga agtgtcgttt ccggcatata
     1981 cgatcgacgg tcagccttat cacgcgccca cgcgcaagct cggtctgggc ctgactgagt
     2041 atgtgattaa cacgaaacag ccattgcaca ttaaacgtga ccttgaaggt gctctgcgga
     2101 aactcggttt gcagttgagc ggccgcagcg cccaatgctg gctggcggtg ccgatgctcg
     2161 ttggtgaaaa agttgtcggc gtgatcacca tccaggatta tgaacggcct gaggcatacg
     2221 atcaggagca tctcgatctg ctgcgtacga ttgctgcgca tgcggcaatc gtcgtggaaa
     2281 atgcgcgact ctatgcggcg atgaaacgcc acgccgatcg cgtcgccctg acaaatcgaa
     2341 tttcccaggc ggtgcgttgc acgctcgacg tctcagaagt ctttgccacg gccgtgcgcg
     2401 agctgggcag ccactttaac gtcgatcgct gttcgttgtt catgaaggac acgcgtgccg
     2461 gccgcgggac aaacgtcgcc gagtatcatc gcccgggcgt cggccccgca gcgcacgatt
     2521 tcgacttgtc gcaggtgaat ggactgaccg ccgcgatgga taggttcggc gtgttggctt
     2581 ttgacaatgt cgctgaggac gagcgcattc gtgatttgta cgagcggatg ctgaagcagt
     2641 tcaacgtcaa atcgatcatg tatgtaggcg tgactgtcgg caacgagctg cttggcgcat
     2701 tcgcgctttc aacgacgcgc cagacgcgac agtggagtga aactgacgtt gagatcgcca
     2761 ggtcagtggc cgaccagacc ggcatcgcga ttcgacaggc gtggctgtat gaaaaggcag
     2821 aagccacttc cgcgcgtgaa gcgctggtca acaaactggg tggagcaatt cgttcttcgt
     2881 taagtttgcc ggacgtgctt gatacaaccg tgcgcgagtt ggggaaagcc ttgtcggctt
     2941 cgcgggtcca ggttcggctt tgcgacggag cgaatcacga actatacgta aagaccgagt
     3001 acacggcgga tggccgccaa accgagggta aattcgacgg ctattacgac cagttgctgc
     3061 gggatcattt ccgcgactcg accaaatccc tcgtaatccc gaatctccac gaatttacca
     3121 gtgatgacgc caagcttacc gatggcgttg cttttcacgc gcgcgagcag ggcctgcagt
     3181 caatgctcgt ctcgccgctg acggtaaaca acaagtttcg cggcgtcatc tgcatcgagc
     3241 aaacagacac ggtccgacat tggaccgaag acgaagtgct gcttgttcaa tctgtcggcg
     3301 ttgaactcgc gacggtcatt gcgcaggccg agttgtttca gatcgtcgcc cgcgccaaga
     3361 acgaatggga aacgaccttc gacgcgatgt ctgacggcgt gttcattttc gatcccgccg
     3421 gtaaattgat tcgcgttaac aaagccggcg ccgcgatgga cagcgaagcg ccccaatcaa
     3481 tcctgggacg gaaatgttgt gaaattctgc gcgcagattc tgacgagctg gaatgcatcg
     3541 tcgaacgttc tttgcgtgaa gctcaaagcg tgaatctcga aattgtgccg cacaaattga
     3601 agcgcccggt gctggtcacg gttgaacctg ttttcgattc cgggcaggtt gtggccgcag
     3661 tctgtacggc gcgcgatctt tcggagctgc gaaatgtcga ggccgtcgct cgcgagcgcc
     3721 agtcgctctt gaaaaacatt cttgagagcg cgcgcgaagc catctacgcg ctcgacctca
     3781 atgggcatta ccaatggtgc aatacggcca tgctcgatct gaccgggtac gagatgcgcg
     3841 agctgattgg ctgttacttc ctcgaaaacg ttcacgacgc agatcgcgac atgcgccgcg
     3901 cccggttcga aacagtgttg aatggagagc cgcagagttt cgaatcgcgt tacgttacaa
     3961 gagacggcac ggttcgacac gcgctggtta acaccgcgcc gatcgtcgtt gacggacaaa
     4021 ccaccggagt attgggcatc gcgcacgaca ttaccgagca gaagcaggaa cgcgagcgcg
     4081 ccggccgggc ggataaactc agggctttgg gccagctcgc ttcgggtgtc gcgcacgact
     4141 tcaacaattc gctcgccgcg atcctgggac gcgcgcaact gattctacgt cgcgcgcacg
     4201 acgaagaatt gattcgcagt ctcggcgtga tcatgacggc cgccgaagac gccgccgcga
     4261 cggtccggcg cattcaaact tttgcgcgaa agtcctcggc cgcggaaatg gaactgctgg
     4321 atatcagcag cttgctgcgc gacgcggttg agatcacgcg cacgcgttgg caaaacgaag
     4381 cgcgggccgc gggccgcagt atcgaggtcg tgctgaatgc cgacgagcgt ttcttcacgc
     4441 gtggcaacgc gtctgagctg cgcgaagttt tcgtcaatct aatcgtgaat gcggtcgacg
     4501 cgatgcccga cggcggcacc ctgacgctct gctgcaagcg agaaggcgag cgcttgaaac
     4561 ttcgattcgc ggacaccggc ctcggtatgg aagaagaagt gcgcgagcgc gtctttgaac
     4621 ctttttacac gacgaaaggc gtgcacggca caggtctggg tttggcggtg agctacggaa
     4681 ttatcgagcg tcactacggc acgatcagcg tatcttcaaa attaggcgag ggaacgactt
     4741 tccacatcga tctgcccttt gatgatactt ccgagccgaa ggcgctttca gaaaaagtaa
     4801 acgccgaaac ctcgacttcg ctgtccgtgc tggtca
//
LOCUS       DATDBY010000313         2744 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_62050, whole genome shotgun sequence.
ACCESSION   DATDBY010000313 DATDBY010000000
VERSION     DATDBY010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62050"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1451)
                     /locus_tag="VIT19_05795"
     CDS             complement(<1..1451)
                     /locus_tag="VIT19_05795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838530.1"
                     /translation="MSSNPPNNKPLLRTTGDGSLFLSRVQQAATKKVAEATQQRSATI
                     GTANTSAAAALADAHRTAADILRPKPEAFYALTDQGLFRSDVQGKCDPPLQLGPGATD
                     FVIDLGAQRIYWSERRAFNSGGSSPAQIDGFALYPAPSFQGQPYTLVAPMSFPSTSWA
                     YCEASNFDFPGQPGSPVRSLKLGPDTLLTLYEHYDGEFGFGRVRMIFNDDPNFENDWP
                     LDKTSAFSLTRFYHCLMSANLDGTDKKQIATLPQFNTYTPNSGALALDGDRGLLFWLT
                     PSGQVMNVDLGGKPPVVLQTLHGLVSGVLGLAVDTVNQTLYWSEPEVYGTLPYGDYLP
                     FGPGSRTLTTEASQILPPFPFSLPQDWGPFGKPPVEIAVDAANDRMYCCNGQQIWRAG
                     LDGAPLPGDAMRPTPNQLWGFRIYGYLNSIWGLKLDQRNQTLYWLTGNDLMQAQVDPS
                     LSQHDIMESVKTVFSFQGLTGQVLDLGLLESASL"
     gene            complement(1463..>2744)
                     /locus_tag="VIT19_05800"
     CDS             complement(1463..>2744)
                     /locus_tag="VIT19_05800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838531.1"
                     /translation="LSPIQLGKVFSLTGSGKGVTVKQVQTADGQWEAMAVPPQPGQKL
                     TTRDYQVIAPGGATIAFNSQKSPFLDVSAKASLFNFINAEVEIEIRDDGFNWKQSESI
                     GSLAKIEFDCALSKSGFSCHAEFDLDLKGDIGPFKILGIDFGTLHLDIKFEAELNITI
                     DANGFSLEVAGGFEFEGDKLTMPTLTIQEDFQSFEQLPKLILKQIEDEAETIFKKLFD
                     EANQLLQDAEKEAEAIAAAAEKEAKQIAADAEAAAAKVVATANQAYQAARQGVEDAEA
                     EVKKIDAAGAQVVTDAEQTAKDIASKAATEAKAIEDDAATVLTDADAVVTSIDTALTN
                     EVTAIGDAATAVWNAAVLEATTIENAIEGEVKSILQWGKNVGDALVAAANAFKDEVAT
                     EVTQIADEIAEKLKEAAEWLEHQAEATWHAVSKY"
BASE COUNT          565 a          769 c          759 g          651 t
ORIGIN      
        1 agactggctg attccaacag tcctaaatcc agcacctgtc cggtgaggcc ctgaaatgaa
       61 aagaccgttt tcacgctctc cattatgtcg tgctgtgaaa gactcggatc aacctgggcc
      121 tgcatcaggt cgtttccggt cagccaatat aaagtctgat tacgctggtc aagtttcagt
      181 ccccaaatgc tgttgagata tccgtagatg cgaaagcccc aaagctggtt tggcgtgggc
      241 cgcatggcat cgccgggcag cggagcgccg tcgaggcccg ctcgccaaat ctgctggcca
      301 ttgcagcagt acatgcgatc gttggcggca tccaccgcga tctcgaccgg cggtttgccg
      361 aagggtcccc agtcttgcgg caggctaaac gggaaaggag gaagaatttg cgacgcctcc
      421 gttgtcaaag ttcgcgatcc cggcccgaaa ggcaggtaat cgccgtaggg cagagtgccg
      481 tacacctcgg gctcggacca ataaagggtt tgattgactg tatcgacagc gagtcctaac
      541 acacctgaca cgaggccatg aagcgtttgc agaacgaccg gcggtttgcc gcccaggtct
      601 acattcataa cctggccgct gggcgtcagc caaaacaaca atccgcgatc gccgtcgagc
      661 gccaaggcgc cactattcgg ggtgtaggtg ttgaattgcg gcagcgtagc gatctgcttc
      721 ttatcagttc catccagatt cgcggacatc aggcaatggt agaaacgcgt cagcgaaaac
      781 gcactcgtct tatcgagcgg ccaatcgttt tcgaaattcg gatcatcatt gaagatcatt
      841 cgcactcgcc cgaagccgaa ttcgccgtca tagtgctcat atagagtaag aagtgtgtcg
      901 ggtccgagct tcaacgaacg aactggagac cctggctgcc cgggaaaatc aaaattagat
      961 gcctcgcaat aagcccaact ggtgctggga aaggacattg gtgcgaccag ggtataaggc
     1021 tggccttgaa atgaaggggc gggatagagg gcgaacccat ctatttgcgc cggcgatgaa
     1081 cctccggaat tgaaggcccg ccgctcagac caataaattc tctgcgcacc gagatcgatc
     1141 acgaaatccg tagcgccggg tcccaactga agcggcggat cgcatttacc ctgaacgtcc
     1201 gaacgaaaaa gtccctggtc ggttagtgcg taaaaggcct cgggctttgg tcgcagaatg
     1261 tccgcggccg tgcgatgagc gtcagcgagg gctgcggctg cggaagtatt ggcggtgccg
     1321 attgtagcgc tgcgctgttg cgttgcctcg gcaacttttt tcgtcgcagc ctgctgcacg
     1381 cgactcagaa acagcgaacc gtcaccggtc gtgcggagca gtggcttgtt gtttggcgga
     1441 ttactggaca tcggtttggt ttttagtact tgctgactgc gtgccaggta gcctcagcct
     1501 ggtgctctaa ccattcggca gcttctttca atttctcggc aatctcatca gcgatctgtg
     1561 taacctcagt cgcaacctcg tctttgaacg cattcgcggc ggcaaccagg gcatcgccca
     1621 cattcttgcc ccattgaaga atgcttttca cctcgccttc gattgcgttt tcaatcgtcg
     1681 tggcctctaa aacggccgca ttccacaccg cggtagcggc gtcgccgatg gcggttactt
     1741 cgttcgtcag cgcggtgtca atgcttgtta cgactgcgtc tgcatcagtc aaaactgtcg
     1801 ccgcgtcgtc ttcgattgcc ttggcttcgg ttgctgcctt gctcgcgatg tcttttgcgg
     1861 tttgctcggc gtcggttacg acctgagctc cggctgcgtc aatcttcttc acttctgcct
     1921 cggcgtcctc gacgccttgc cgcgcggctt ggtaagcctg atttgcagtc gcaactactt
     1981 tcgcggccgc cgcttccgcg tcagcggcaa tctgtttcgc ttctttctca gcggcggcgg
     2041 cgatcgcttc cgcttctttt tcagcatcct ggagaagctg gttcgcttca tcgaacagct
     2101 ttttgaagat cgtttcggct tcgtcctcaa tctgcttgag aatcagcttg ggaagttgtt
     2161 cgaaggactg aaagtcttcc tggattgtca gcgtcggcat cgttagcttg tcgccttcga
     2221 attcgaaccc gccagcgact tcaagggaaa aaccgttggc gtcgatggtg atgttgagtt
     2281 cagcctcaaa cttaatgtcc agatgcagcg tgccaaagtc gattcccaga atcttgaaag
     2341 gcccaatatc gccctttaga tcgagatcaa actcggcatg gcaactgaag ccggacttgc
     2401 tgagggcgca gtcgaattcg atttttgcga gcgagccaat tgattcggac tgtttccagt
     2461 taaagccgtc atcgcggatt tcgatttcaa cctcggcatt gatgaagttg aaaagcgacg
     2521 ccttcgcgct gacatcgagg aaaggcgact tctggctgtt gaaagcgatc gtcgcgcccc
     2581 ccggcgcgat tacttgatag tcccgcgtgg tcaacttttg cccgggctga ggcgggaccg
     2641 ccatagcttc ccactggcca tcagcagtct gtacctgctt gaccgtcacc cctttgccgg
     2701 aacccgttag cgaaaacacc ttgcctagtt gaatcggcga caac
//
LOCUS       DATDBY010000314         9000 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1023124, whole genome shotgun sequence.
ACCESSION   DATDBY010000314 DATDBY010000000
VERSION     DATDBY010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 9000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9000
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023124"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2030)
                     /locus_tag="VIT19_05805"
     CDS             complement(<1..2030)
                     /locus_tag="VIT19_05805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838532.1"
                     /translation="MEDSSSRPKVSKSEQDNPRSGTRDQAGANPFFSPESIADSLTSA
                     LENGDLDRLAQSRRAFQSERRTVSKAADEWTPPDLGAMLERRNAQRAIGEAVISTDDL
                     RKEEEALRRAQEELERRRHEVEVAKRRAEEEATRKAEESKRRAIEAETQRRAREHGAR
                     LAELEAIRKAAETAAFEAARQEQLLNAEIDALRQNEEEQLKRLAEAENRLRDQVAACD
                     AAEVETQKRAEREQWLSAELEVLRNAEQQEVTRLKQIEGGILSQLEARHRAEEEANQR
                     DEKLRQLNAEIESLNTAADQQRQTIAGKEYALTQLEHVRKEAEEEAHRQAQTQQRLNS
                     EIQALHETEYQLAQTIEAANARLAEQENARQLLTQQIDALTLREQQLKQEIEALAVHA
                     AEERAAAAHLENEMQESQQTRTQAKERLAELSRKEQAIAAELERLRTEEQASLQRIAD
                     AEARLREQEEAHLKAKIEEELRSQKEIDRLAAMEADRNKLRADIQERAQRSHSLTSQI
                     KALEKDRQAHATRLAEIEVQAKQAQEEFDAGVRAFEQASSDYERHLAEYEAKRSELAM
                     HGRELAERERSRAAEIDQLAAKDAALVERLNELDTRVANQEKALNERRSEIEQLNQKE
                     QTLIADTQNARHTEQNLLKRIVEVEARFVEAAKTRQLAEAQAKLQIEKEDRL"
     gene            complement(2488..3006)
                     /locus_tag="VIT19_05810"
     CDS             complement(2488..3006)
                     /locus_tag="VIT19_05810"
                     /inference="COORDINATES: protein motif:HMM:NF025173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEY5838533.1"
                     /translation="MKLNWKTFSVAAAIAGALLLTTAAVVFSQNPPQRPDGPPGPPRG
                     PFGHGPHGPHGPGGFGPLAGLNLTDAQKEQIKQIHEGFAEQTKALRDQMRTLHESQRD
                     PMGNFDEAAVRSAAEARAKVQVEMEVAHAKMMSQVANVLTAEQRAQMAERHKHRGKGL
                     PRPPAPPDEPEF"
     gene            complement(3215..5143)
                     /locus_tag="VIT19_05815"
     CDS             complement(3215..5143)
                     /locus_tag="VIT19_05815"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5838534.1"
                     /translation="MNLQSQRKTSIADGFGSDVVKRASEICRHARELEKAGEYEGAAE
                     ALSAFWDPSTNALNIDQLDDATQAEVLLRVGCVVGWQGSVDQEHGTQETAKDFISRSI
                     RLYEDLGEQRKTAEARADLGLCYWREGAFDEARINFAQALSELPKDEPDLRALILIRA
                     GIVEVDARRLSEALRIYGEAADVVAQSSDHNLQGTFHNEFGLALRRMADLNNLEAYLD
                     RALIEYSAASFHFERAGNTRYVARVENNLGFLFYTIGRHDDAHRHLDRARQLFIQLKD
                     TGTVAQVDETRARTFLASGRFADAERVIRAAVRVLERGDEKAILAEAITTYGTVKARL
                     GKFVRARQLLDRAIETAETCGDLEGAGRAKLSIIEELTAQTTPLELAATYEAAVDLLK
                     NSQEPTTTSRLVSVARIVIGALGESGDDPQPVIAESWDNFSIKREVRAFEKSLIERAL
                     RDSGGAVTKAAHLLGFKHHQSLISLINSRHRDLLVQRSAVRPRRSHLFSKPRRAKQKL
                     AAANSMRTPAHIRILHVEDEPQVSDAARGAMSGEKWEVELCPDGDSALRKLTGNEHYD
                     VVIVDSSLSGVTGLELAQRTRKITHRRRTPILMLSGDDLETEARSAGVDAFLKKSDQL
                     TELTPTVARLLREGSRNR"
     gene            5264..5506
                     /locus_tag="VIT19_05820"
     CDS             5264..5506
                     /locus_tag="VIT19_05820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838535.1"
                     /translation="MNKLKSLVAAVVLTFALTVSAAGQAPVCKPGETHSPPCSSTLVT
                     QEDAALTPVETQTLPEVQSLEIVSLVELALHALLLA"
     gene            5859..7037
                     /locus_tag="VIT19_05825"
     CDS             5859..7037
                     /locus_tag="VIT19_05825"
                     /inference="COORDINATES: protein motif:HMM:NF024760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family intramembrane metalloprotease"
                     /protein_id="HEY5838536.1"
                     /translation="MNRFDQNPAVYQPIVMPKSKRLSAIKIIAAVVAAMFAALLGLLI
                     LLLIGAETGLVELVIGMICATLPVPIYVMLLLWIDRYEAEPLWMLATSFFWGAIIAVF
                     ISLIFNTGVQIFATAASNSEEVGDAVGAVISAPIVEESAKALILVILFFWKKDEFDGI
                     VDGIVYAGMVGLGFAMTENILYYGRAMQKGPDFLKAVWIVRGMAAPFSHPLFTSMTGI
                     GLGWARQSQNTFTKIMAPFLGFGLAVLMHAAWNGSAVFFGGGGFFVTYFMVMGPALVI
                     TLMVTHFQLKREGRLVQQFLYPDYQKGFFDQHEFERLCTVRGRMKMSWSAYWSHGFSG
                     WRMRRRCNQMASELAFHRSRVARGFHRNAQEAAEREEEYRSTLLELRQQFTQRQQGRP
                     "
     gene            7217..7903
                     /locus_tag="VIT19_05830"
     CDS             7217..7903
                     /locus_tag="VIT19_05830"
                     /EC_number="3.1.4.17"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004114 - 3',5'-cyclic-nucleotide
                     phosphodiesterase activity [Evidence IEA];
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-nucleotide phosphodiesterase"
                     /protein_id="HEY5838537.1"
                     /translation="MTVDAGSLGLALTEPQRRTVRDVIVTHPHMDHIASLPIFVDDLF
                     AELKEPIRIHGTSEVIALLERDVFNDNVYPRFAELRNQHGPVMKYVPFKTGEPFTVAH
                     LTVLAMQVNHIVPTVGLLVSDDRSTVLFSSDTAETDELWEVANRAPRLDALLIEASFP
                     NSMRELARVSKHLTPETMAQELRKLDHNGIDILAVHVKPAYRAKVIEEIEALGIEKLS
                     VMEAGRVYEW"
     gene            complement(7980..8279)
                     /locus_tag="VIT19_05835"
     CDS             complement(7980..8279)
                     /locus_tag="VIT19_05835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838538.1"
                     /translation="MKTRTKRLLGGVAVAAGAMGAIGALMMKGSNARRKRRTDRNSAD
                     IWARPGMNVVFRAELMPGRDGSERTFRVQELLPSGRVLLENFSGEHAEKEFERVR"
BASE COUNT         1719 a         2565 c         2493 g         2223 t
ORIGIN      
        1 ttaagccgat cttctttctc gatttgcagc ttggcctgag cttccgccag ttgtctggtc
       61 ttcgcggctt cgacgaagcg tgcttcgact tcgacgattc gcttcaacag attttgttcc
      121 gtgtgccggg cgttctgcgt gtcggcgatc agcgtctgct ctttttgatt gagttgctca
      181 atctcagatc gacgctcatt taacgctttt tcctggttgg cgacccgggt gtcgagttcg
      241 ttgagccgct cgaccagtgc ggcgtccttc gccgcaagct ggtcgatttc agcggcccgt
      301 gaccgttctc tttcggcaag ctcgcgccca tgcatggcca gctcgcttcg tttcgcttcg
      361 tactcagcca ggtgtctttc gtagtctgac gaggcctgct caaaagcccg cacgccggcg
      421 tcaaactctt cctgagcctg tttcgcctgt acttcgattt cggccagccg tgtagcgtgc
      481 gcctggcgat ccttttcgag cgccttgatc tgcgaagtca gcgaatgcga acgttgcgcg
      541 cgctcctgaa tgtccgcgcg caatttgttg cggtcggctt ccatcgccgc gagccgatcg
      601 atttctttct gactgcgaag ttcctcttcg atcttcgctt tcaggtgcgc ttcttcctgt
      661 tcgcgcaatc gcgcttccgc gtccgcgatt cgttgcagcg acgcctgctc ttcggtgcgc
      721 aggcgctcga gttcggcggc gatcgcttgt tccttgcggc ttagttcagc aagtcgctct
      781 ttggcctgtg tgcgagtctg ctgcgactcc tgcatttcgt tttccagatg cgcggcggcg
      841 gcgcgttctt cggccgcatg gacggcgagt gcttcgatct cttgtttgag ttgctgctcg
      901 cgaagtgtca gtgcgtcgat ttgctgggtt aagagctgac gagcattctc ctgctcagcc
      961 aggcgagcat tcgcagcctc aatagtctga gcaagttgat attcggtttc gtgaagcgct
     1021 tgaatttctg aattcagacg ctgctgagtc tgggcctgtc ggtgtgcttc ctcttcagcc
     1081 tctttgcgca cgtgttcgag ctgagttagt gcatactcct tccccgcaat tgtctgacgc
     1141 tgttggtcag cagctgtgtt gagcgattca atctcggcat ttagctgacg caatttctcg
     1201 tcgcgctggt tggcttcctc ttccgcgcga tgacgagctt caagttgcga aagaatcccg
     1261 ccctcaattt gtttgaggcg ggtgacttcc tgctgttctg cgttgcgcag cacttctagt
     1321 tcggcgctga gccattgctc gcgctcggcg cgtttctgtg tttcgacctc agctgcgtca
     1381 cacgcggcga cttgatcccg taaacggttc tcggcttccg cgagtcgctt cagttgttcc
     1441 tcttcgttct gccgtaacgc atcgatttcc gcgttcaaca gttgctcttg gcgcgcagct
     1501 tcaaacgcgg cagtttcggc agccttgcgg atcgcttcca attccgccag tcgcgcgccg
     1561 tgttcgcgcg cgcggcgctg ggtttcagct tcgatagcgc gccgctttga ttcttcggct
     1621 ttgcgcgtcg cctcttcttc tgcgcgtcgc ttggcaactt caacttcgtg acggcgtcgt
     1681 tcgagttctt cctgcgcccg gcgcagagct tcttcttctt tgcgtagatc gtcggtggag
     1741 atgaccgcct cgccgattgc gcgttgcgcg ttccggcgtt cgagcatcgc tcccagatcg
     1801 gggggcgtcc attcgtcagc cgccttggag acggtccgcc gttcgctttg gaaagcgcgc
     1861 cgcgattggg cgaggcggtc gaggtcgcca ttttcgaggg cagacgtcaa cgagtccgcg
     1921 atcgactccg ggctgaaaaa cgggttagca ccagcttgat cgcgggtgcc ggaacgaggg
     1981 ttgtcctgtt cggatttaga gactttgggg cgcgaagacg aatcttccat gttctgattc
     2041 tccatgctga gccaaggtcg agggtgctcg cgatggttat tggtcgttca ggatttccgt
     2101 agcttgcagg ctctcagcaa acaagtcaag gttctgagga aattcaatta acagctttca
     2161 gcgggattgg acgagggttc gccggtctga agggccggaa ggtcacttca cggccatgtt
     2221 cattcttaca aatggacggg gcaccggtca acaggttttc tggaacggtt ctggaacagg
     2281 caaatagtgc gattttcgaa gcattttggc gatctccgca accgtttcct tcggcgggac
     2341 atttcaattc tgcgcccgat caggcagcga gcggttttgg tgcagctgtt ccccgcgacg
     2401 caaaacggct caatgacaag gcccgtcggt tggttgacgc gcccccttca ttgagccgtt
     2461 cgttccgagg agtgcctctc ctcctcttta gaactcaggt tcgtcaggag gcgccggcgg
     2521 ccgcggcaga cccttccccc tgtgcttatg tcgctcggcc atttgggctc gctgttcggc
     2581 ggtcaggacg ttcgcgacct gcgacatcat tttcgcgtga gcgacttcca tttccacttg
     2641 aaccttcgct cgcgcttcag ccgctgaacg aacggctgct tcatcaaagt tgcccatcgg
     2701 atcgcgttga ctttcatgaa gcgtgcgcat ttgatcgcgc agcgctttgg tttgttcggc
     2761 aaatccttca tgaatctgtt tgatttgttc cttctgagcg tcagtaaggt tcaatccggc
     2821 caacgggcca aagccgcctg gtccgtgcgg gccatggggg ccgtgtccaa acgggccgcg
     2881 cggcggtccc ggcggaccgt ctggtcgttg cggcgggttt tgggaaaaaa cgacggcggc
     2941 tgtcgttaac aagagtgcgc cggcgatggc cgcagcgacg ctgaatgttt tccagttcag
     3001 tttcacagtc aatgctcctt ttgaaaatag ctagatggaa agcgcacgcg tcgctttcta
     3061 cctgtttgat gaattagtcg caaaggagga ggagttatat gacaagcgag tcaaaaacgc
     3121 tcgcaaagca agtgattggg attagcgaac tggcagtaga aaaggacacg cggactaacc
     3181 tggaaccgcg tgcccttcag cctggcagag taatctaccg gtttctcgaa ccttctctta
     3241 ggagtctcgc taccgtcggc gtcagttcag ttaactgatc ggacttctta aggaaggcat
     3301 ctacgccggc gctccgcgcc tcagtttcta aatcgtcgcc cgaaagcatg agaatcggtg
     3361 tccgccggcg atgagttatc ttgcgagtgc gctgcgccag ctcgagcccg gtaacaccgg
     3421 aaagactgct gtcaacaatc actacatcgt agtgctcgtt acccgtcagt tttctgagcg
     3481 cgctatcgcc atccgggcac aactcgactt cccatttttc tccggacatc gcgccacgtg
     3541 cggcgtcgga gacctgtggt tcatcttcga cgtgcaagat gcgaatgtgg gccggcgtgc
     3601 gcattgagtt cgcggcggcc agcttttgtt tagccctgcg cggtttcgag aaaaggtgac
     3661 ttcgacgtgg tcgcacagcc gaacgctgga cgagcaggtc gcgatgccgg ctgttgatta
     3721 gcgaaataag actctggtgg tgtttaaatc cgagcaaatg cgcagccttt gtgaccgccc
     3781 cgcccgaatc gcgtagagcg cgctcgatta gtgacttttc aaaggcgcgg acctcgcgct
     3841 tgatcgaaaa attgtcccaa gactccgcga tcaccggttg cgggtcgtca ccgctctcac
     3901 ccagcgcgcc aataacaatg cgcgccaccg aaaccagtcg gctggtcgtc gtcggctcct
     3961 gcgaattctt taacaaatca accgcggcct catacgtcgc cgccagctcg agcggtgttg
     4021 tctgcgcggt tagttcttcg atgatgctta gcttcgcgcg gccagcccct tccagatcgc
     4081 cacatgtttc ggcagtctcg atcgctcgat ccagcaactg gcgcgcgcgc acgaacttac
     4141 ccaaacgcgc tttcacggtt ccgtaggtag tgatcgcctc agccagaatt gctttctcat
     4201 cgcctctctc aaggacgcgt acagccgcgc gaatgacgcg ttcggcatcc gcgaatcgtc
     4261 cactggccaa aaacgtccgc gcacgcgtct cgtccacctg cgctacggtc ccggtgtctt
     4321 tcagttggat aaaaagctgc cgggcgcgat ccaaatggcg gtgcgcgtcg tcgtgccgtc
     4381 caattgtgta gaacaagaag cctaaattat tttcaacgcg cgccacgtag cgtgtgtttc
     4441 cagctcgttc gaaatgaaag cttgcagcgg aatactctat caacgcgcga tccaggtacg
     4501 cctcgagatt gtttaggtcg gccatgcggc gcaacgcgag cccgaattca ttgtggaaag
     4561 tgccctgcaa attatggtcg ctgctttgcg caactacgtc ggcggcttcg ccatagattc
     4621 ttagcgcctc gctcaaacgt ctcgcatcga cttctacaat gccggcgcga attagaatca
     4681 atgctctcaa gtcgggctca tctttgggta gttcacttaa cgcttgggcg aaattgattc
     4741 tggcctcgtc gaaagctccc tcgcgccagt agcaaaggcc gaggtcggca cgtgcctctg
     4801 cggttttccg ttgctcgccc aaatcttcat agaggcgaat actgcggctt atgaagtcct
     4861 tggcggtctc ttgcgtcccg tgctcctgat caacgctgcc ttgccacccg accacgcagc
     4921 cgacccgcag caacacttca gcttgggtcg cgtcgtcgag ctgatcgatg tttagtgcgt
     4981 tcgtcgaggg atcccaaaac gcggatagag cctctgccgc gccttcatat tcgcctgcct
     5041 tctctaattc cctggcatga cggcagattt cactcgcccg tttgacgaca tccgagccaa
     5101 atccatccgc aattgaagtc ttgcgctgag actgtaagtt catgtgacgt gtgcctttct
     5161 tccgttttga taataactgt gcgcctgaat ctgttatccg ctagaatctg cgcgctttgc
     5221 tacttgaaga ccgaaacaat ttcgaaacta aagggacaaa accatgaata aactcaaatc
     5281 cttagttgca gcagtcgttc tgacgtttgc tcttaccgtc tcagccgcgg gccaggctcc
     5341 ggtgtgtaaa cccggtgaga cgcacagtcc cccgtgctcc tccactctgg taactcaaga
     5401 ggacgctgct ttgactcctg tcgaaacgca gaccctgccc gaggttcaaa gcctggagat
     5461 cgtgtcgctg gtcgagctcg cgctgcacgc cctgctgttg gcctaaccgc gacgatttca
     5521 aaatctggta acgaaaacat ctgcccaagc ctgattgagc tggcagctaa atattggtgt
     5581 gccaacgaac cgttaccggc gctgccgcgg ttgcggggcg tagcatagac gtaccgtgac
     5641 tgctttgcaa gcacaattgc ggctggcgca taactgctga caggtagtcg cttatgtctt
     5701 gtcgctacaa ttcaggcggc aggttggttt agtatcggcg gatagatgat tcgagcatgc
     5761 gtggacggag gctgcttact actgccccgc gcgcgaaatg atcggtggcc gctggtttga
     5821 attctcgcta tactgcgcct gccaaatcac cacactgcat gaaccgcttc gaccagaatc
     5881 ccgctgttta tcaaccgatt gtgatgccga aatcgaagcg cttgagtgcg atcaagatta
     5941 tcgccgctgt cgtcgcggca atgttcgcgg cgctgcttgg gctgcttatt ctgttgctga
     6001 ttggcgctga gacgggattg gtagaactgg ttatcggcat gatctgtgcg actttgccgg
     6061 tgccgatcta tgtgatgctc ctgctctgga ttgatcgcta tgaagcggaa cccctttgga
     6121 tgctggctac aagtttcttt tggggcgcga tcatcgcggt gtttatctca ttgattttca
     6181 acaccggcgt tcagattttt gccacggctg ccagcaacag tgaagaggtt ggcgacgccg
     6241 tgggcgcggt gatttcagcc cccattgttg aggaaagcgc gaaggcccta atcctcgtca
     6301 ttcttttctt ttggaagaaa gacgagttcg acgggattgt cgacggaatt gtttacgcgg
     6361 gcatggttgg acttggcttt gccatgactg aaaatattct gtactacggt cgcgccatgc
     6421 aaaaggggcc tgactttttg aaagcggttt ggattgtccg cggaatggcg gcgcccttct
     6481 cgcatccctt gttcaccagc atgaccggaa tcggacttgg ctgggcgcgg caatcgcaga
     6541 acaccttcac gaaaatcatg gcgccgttcc tcggcttcgg tcttgccgtg ctcatgcacg
     6601 cggcctggaa cggatcggcg gtgttcttcg gcggtggagg attctttgtg acttacttca
     6661 tggtgatggg cccggctctg gtcattactt tgatggtcac tcattttcaa ctgaagcgcg
     6721 aaggccgact cgtccagcag ttcctgtacc cggattatca gaaaggcttt ttcgatcagc
     6781 atgaatttga aaggctctgc accgtgcgcg gccgcatgaa gatgtcgtgg agcgcctact
     6841 ggtcgcacgg gttttcaggt tggcgcatgc gccggcgctg taatcaaatg gcgagcgagt
     6901 tggcgtttca tcgcagtcgc gtcgctcgtg gctttcaccg taatgcgcaa gaggcggctg
     6961 aacgcgaaga agagtatcgg tcgactttgc ttgagcttcg gcagcagttc acgcagcgcc
     7021 aacagggcag accttagcgc tggcaaaaaa gtttcgcgtc cgcagcgaca gttagcttat
     7081 acttgcgccc gaactgcgca ggcacatctg aacggtagct tacccgttga agattcaact
     7141 tttacccagc tcttttgacg gcgccggaag gtccactccg gctcagcgac tcacgtgctt
     7201 cttgattgac gatcgcgtga cagtcgacgc cggcagcttg ggcctcgcgt tgactgaacc
     7261 gcagcggcgc accgtgcgcg atgtgatcgt cacgcacccg cacatggatc acatcgcgag
     7321 tcttccgatt ttcgtagatg acctgtttgc cgaactaaaa gaacccatcc gcattcacgg
     7381 gacgtccgag gtcattgcgc tgcttgagcg tgatgtcttc aacgacaatg tctatccgcg
     7441 ctttgccgag ctgcggaatc agcacgggcc ggtgatgaag tacgtgccgt tcaaaaccgg
     7501 cgagccattc acagtcgccc acctcacggt tctcgcaatg caggtcaatc acatcgttcc
     7561 gacggttgga ctgctggttt ctgatgaccg ttcgacggtc ttgtttagtt ccgacacggc
     7621 ggaaactgac gagctttggg aagtcgccaa ccgcgcaccc cgcctggatg cgctgctgat
     7681 cgaagcctcg tttcccaact caatgcgcga gctggcaaga gtatcgaagc acctgacgcc
     7741 agagacgatg gcccaggaat tacgcaaact ggatcacaac ggaatcgata ttctggcagt
     7801 gcatgtgaag cctgcctatc gcgcgaaggt gattgaggaa atcgaagcgt tggggatcga
     7861 gaagttaagc gtgatggaag ccggaagagt ttacgagtgg tgaaacgggc aaaaagctaa
     7921 cggcaaagag ccaggaaagt accgtcgacc ctttgccctt agctccttgc tcttcgcgcc
     7981 tacctgacgc gctcaaattc tttctcagca tgctcaccgg aaaaattctc aagcaggacg
     8041 cgcccgctgg gtagcagctc ttgtactcgg aacgttcgtt ctgaaccatc gcggcccggc
     8101 atcaactcgg ctctgaacac gacattcatg cccggtcgcg cccagatgtc ggcgctgttg
     8161 cggtccgtac ggcgcttgcg gcgcgcattg ctgcctttca tcatcaaagc tccaatcgcg
     8221 cccatcgctc cagctgccac ggccactcct cccaacaaac gtttcgttct cgttttcata
     8281 gccgaagtag accgcccatc acactcgtaa agttgacagt taccttggca aatccaccca
     8341 agaacgtcaa cttaatagca acccttgttc ccgcacacaa agaaagcgcg acttccgctc
     8401 agtaaaccgc ggtcgtcgcg ccttattaca gaatcagccg cctgtcctta gtggcacatc
     8461 ggaacgagtt tggcggcgtt gcttgggaaa atcggcagcc cactgagtgc acggtcggcg
     8521 ttaatctccg taaatttggc ccattgttcc ggaacattat cttcggcgaa aatagcttcg
     8581 acagggcatt cggggacgca agcgtcacaa tcgatgcacg tctcgggatt tatgacgagc
     8641 atgtcatcgt caagatgaaa ggcatccaca ggacagacca ttgcacaatc agtgtatcgg
     8701 cagttaacgc agggatcagc caccacgtac gtcataaacg aatcatcctc cagctgtgat
     8761 tcaaatactg cggttcgaaa aacgcggtca tcctaacaca gggcacctaa cgtcacgcaa
     8821 tttcattcgc tcgatgatga ggccgatttc cacgcgtgaa tcggcgcccc gtctttgaag
     8881 tcgtagaatt cgagatcgat ggccgcgaac attttcgtca gcatgatgat ttgaccggtg
     8941 tgcatcgaaa aatgttcgat cacgtggaag attgccgcca acgccgacac gtcggacttc
//
LOCUS       DATDBY010000315         3236 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2705287, whole genome shotgun sequence.
ACCESSION   DATDBY010000315 DATDBY010000000
VERSION     DATDBY010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3236
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2705287"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2073)
                     /locus_tag="VIT19_05840"
     CDS             complement(<1..2073)
                     /locus_tag="VIT19_05840"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY5838539.1"
                     /translation="MPNESNNGKPLNVIGKPFRKVDARAKCTGQTKFADDIILPRMLA
                     CKILRTHEPHALIKNIDVSKALALPGVIAIITGKDLPISYGILPVSQDEHALCIDKVR
                     FVGDPVAAVAAIDEDVAFDAMNLIEVEYERLQTITSIEEGLLVDEPRIHEYGDGGNVH
                     KKVSLEFGDVDEGFAEADLVREDTFFYEGNTHLPMEQHAAVAHFDSDQKLTLWSSTQT
                     PHYVHRALAKVLELRASHIRVIATPNGGGFGGKSDPFNHEVVVSKLAMITGRPVKCTL
                     TREEVFYCHRGRHPVLMHVKTGVKKDGAITAMHFKTFLDGGAYGSYGVASTFYTGALQ
                     TVTYEVPRYKFQGARVFTNKPPCGPKRGHGTPQPRYGLEVHLDKIAEQLNLDPVDIRR
                     NHLAPANSLTANYLRIGSMGLGACIDKVVEGSDWKKKFSWDRYAGVPPATGAQASSLA
                     VDRAKTMATGTVALQSEDRKLPYGKGIGIACSSYLCGAGLPIYWNNMPQSGVQLRLDR
                     QGGVCVMCGSTDIGQGSDSILAYIVAEILGIDPFDIRVVTADTDLTPVDLGSYSSRVT
                     LMTGNAAIQAAERARELLTLAVAEKLNLPIENISFAERRAFDVENPEVGVSFAEAVVL
                     AESKFGTIGTVGSYSPPRSPGKYKGAGVGPSPAYSYSAAVAEVDVDPTTGIVVVERIW
                     IAHDIGKSI"
     gene            complement(2202..2729)
                     /locus_tag="VIT19_05845"
     CDS             complement(2202..2729)
                     /locus_tag="VIT19_05845"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY5838540.1"
                     /translation="MTNGNKQKAHITFVLNGEQAEVAFAPHKTLLEVLREDLALTGTK
                     HGCELGECGTCTVLVDGKSILSCLMLGLDAEGREVTTVEGLAENGQLHPLQDTFADTG
                     AAQCGYCTPGFMLAAKELIDKNSTPSRDEIKEALSGNLCRCTGYIKIYEAVELAAARM
                     RGEQLELPSESIYGL"
     gene            complement(2777..>3236)
                     /locus_tag="VIT19_05850"
     CDS             complement(2777..>3236)
                     /locus_tag="VIT19_05850"
                     /inference="COORDINATES: protein motif:HMM:NF014611.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEY5838541.1"
                     /translation="RPDVAFFGQKDAQQAAVLKRMVRDLAFDTKVVVLPIVREESGLA
                     LSSRNAFLTDEQKRAAAVLHRGLSQASRAYNDGERSAERLVEIVSSTIAAEPMARIDY
                     VSLNDAETFQPLEQVAERPALLSVAVYIGKTRLIDNMVMGVTEKQDAAAV"
BASE COUNT          664 a          960 c          878 g          734 t
ORIGIN      
        1 gatcgatttt ccgatgtcgt gcgcgatcca gatgcgttcg acaacaacga tgccggtggt
       61 cggatcgacg tccacttccg cgaccgccgc cgagtaactg taagccggcg aaggcccgac
      121 gcccgcacct ttgtattttc ctggcgagcg cggcggcgag taagaaccaa ccgtgccaat
      181 ggtgccgaac tttgattcgg caagcacgac ggcctcggcg aatgaaaccc caacttcggg
      241 gttctcgaca tcgaaggcac gccgctcggc gaacgaaatg ttttcaatcg gcaggttaag
      301 cttttcggca accgccaagg tcagaagttc tcttgcccgc tcggctgctt gaatcgccgc
      361 gttgccggtc atcagcgtca cgcggctgga gtagctgccg agatcaaccg gcgtcagatc
      421 ggtgtcggcc gtgacgacgc gaatatcgaa cggatcgatt ccgagaattt ccgcgactat
      481 atacgcgagt atcgagtccg aaccttgtcc gatgtcggtt gagccgcaca tgacgcagac
      541 accgccctgg cgatccaacc gcagctgcac cccggattgc ggcatgttgt tccagtaaat
      601 gggcagaccc gcgccgcaga ggtacgacga gcacgcgatc ccgatgccct tgccgtaagg
      661 aagcttgcgg tcttccgact ggagcgcaac cgtcccggtt gccatggttt ttgcgcgatc
      721 cacggcaagc gaggacgctt gcgctccagt cgcaggcggg acgcctgcgt accgatccca
      781 ggaaaacttc tttttccaat ccgaaccctc gaccactttg tcgatgcacg cgcccaggcc
      841 catgctgccg atgcgcagat aattcgcggt gagtgaattc gccggcgcga gatgattacg
      901 acgaatatca accggatcga gattaagttg ctcggcaatc ttgtcgaggt gaacttccag
      961 cccataacga ggctgtggcg ttccatgtcc tcgcttcgga ccgcatggtg gtttgtttgt
     1021 gaagacgcgc gcgccctgaa acttgtagcg cggcacctcg tacgtcacgg tttgcaacgc
     1081 cccggtgtag aaggtgctgg cgactccgta acttccatac gcgccgccgt cgagaaacgt
     1141 tttgaagtgc atcgccgtga tggcgccatc tttcttcact cccgttttaa cgtgcatcag
     1201 caccggatgg cggccgcgat gacaatagaa gacttcttcg cgcgtcaaag tgcatttgac
     1261 cggccggccc gtgatcatgg cgagcttgct gacgacgact tcgtgattga aaggatcgct
     1321 cttaccgcca aagcccccgc catttggcgt ggcaatcacg cgaatgtgac tggcgcgaag
     1381 ctcaagaact ttcgccagcg cgcgatgcac gtaatgcgga gtctgtgtgg aactccacag
     1441 cgtcagcttt tgatcggaat caaagtgagc caccgccgcg tgctgctcca tcggcagatg
     1501 agtgttgcct tcgtagaaga aagtgtcttc gcgaaccagg tctgcttcgg caaaaccttc
     1561 gtcaacgtca ccgaattcaa gcgagacttt tttgtgaacg ttgccgccgt cgccgtattc
     1621 gtgaatgcga ggctcatcga cgagcaatcc ttcttctatc gacgtgattg tttgcagccg
     1681 ttcatattcg acttcgataa ggttcatcgc gtcgaacgcg acgtcttcat cgatcgcggc
     1741 cacggccgca accggatcgc cgacgaatcg cactttgtcg atgcacagcg cgtgttcgtc
     1801 ctgactgaca ggcagaatgc cgtacgagat cggaaggtct ttgccggtaa tgatggcgat
     1861 aacaccgggc agggccagcg cctttgatac atcgatattc ttgatcagcg cgtgtggttc
     1921 atgggtgcgg agaatcttgc aggcgagcat ccgcggcaaa atgatgtcat cggcaaactt
     1981 cgtttggccg gtgcacttcg cgcgcgcatc gaccttgcga aaaggcttgc cgatgacatt
     2041 gagtggtttt ccgttgttag actcgttagg cattcaatct cagctcaaag tgaatctaaa
     2101 taatctcgca gtgaggaagg cgggcttgcc tccgctggct tttgtgatga aaagagcggg
     2161 ggtaaaccac ccttcctgac tgcgagggtg cttatgttgt ttcacaaccc ataaattgat
     2221 tcgctcggca attctaattg ctctccgcgc atacgcgccg ctgccaattc aaccgcttcg
     2281 taaatcttga tgtagcccgt gcagcgacac aggtttcccg agagcgcttc tttaatttcg
     2341 tcgcggcttg gcgttgaatt cttatcaatc aattccttcg cggccaacat gaatccgggc
     2401 gtgcagtaac cgcactgcgc cgcgcccgtg tccgcaaacg tgtcctgaag cggatgcagc
     2461 tgaccatttt cagccaggcc ttccaccgtc gtgacctcgc ggccttcggc atcgagtccc
     2521 agcatcagac acgacaagat cgatttgcca tccaccaaaa ccgtgcatgt gccgcattcg
     2581 cccaattcac agccatgctt ggttccggtc aacgcgagat cttcgcgcag aacttcgagc
     2641 agcgtcttgt gcggcgcgaa cgcaacttcg gcttgctcgc cattgagcac gaaagtgata
     2701 tgcgctttct gtttattacc gttcgtcatt tttcacgaca gcaccctccc ttacggtcgg
     2761 gtttctgatg gcaagctcag accgcggcag catcctgctt ctcagtcaca cccatcacca
     2821 tgttatcaat caaacgcgtc ttgccgatgt acaccgcaac tgacagtaat gccggtctct
     2881 ctgcaacttg ctccagcggt tgaaaggtct cggcgtcatt caagctgacg taatcgatgc
     2941 gcgccatcgg ctctgcggca atcgttgagc ttacaatttc aactaaccgt tcggcgcttc
     3001 gctcaccgtc gttgtatgcc cgggatgcct gcgagagacc gcgatgcaaa actgctgcgg
     3061 cgcgtttttg ttcgtcggtc agaaacgcgt tccgtgacga cagcgccagt ccggattcct
     3121 cgcgcacgat cggcagcacc actactttcg tgtcgaacgc aagatcgcga accatacgtt
     3181 tgagcaccgc cgcctgctgc gcgtccttct gaccaaagaa tgccacgtcc ggccgc
//
LOCUS       DATDBY010000316         2027 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2739968, whole genome shotgun sequence.
ACCESSION   DATDBY010000316 DATDBY010000000
VERSION     DATDBY010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2739968"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..125)
                     /gene="rpsH"
                     /locus_tag="VIT19_05855"
     CDS             complement(<1..125)
                     /gene="rpsH"
                     /locus_tag="VIT19_05855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016281716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEY5838542.1"
                     /translation="MTDPIADMLARIRNAVAAKHSRVDVPASKLKLEIARILKEEG"
     gene            complement(224..409)
                     /locus_tag="VIT19_05860"
     CDS             complement(224..409)
                     /locus_tag="VIT19_05860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003638073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HEY5838543.1"
                     /translation="MAKKSLIAKANRKPKFAVRAYTRCRRCGRPRAYLRKFHLCRICF
                     RQLALEGQIPGVVKSSW"
     gene            complement(504..1046)
                     /gene="rplE"
                     /locus_tag="VIT19_05865"
     CDS             complement(504..1046)
                     /gene="rplE"
                     /locus_tag="VIT19_05865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003638072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEY5838544.1"
                     /translation="MAARLKERYQKDVAPAIAKEFAIKNPMAIPRLEKIVLNMGMGEA
                     VANAKILDTAVVELTSIAGQKPVITKAKKSIASFKLRQGMPIGVMVTLRGERMYEFFD
                     RLVSVALPRVRDFRGVSPKAFDGRGNYTIGVREQLIFPEIDFNKVDKLRGMNISIVTT
                     ARNDEEARALLKALGMPFRA"
     gene            complement(1059..1388)
                     /gene="rplX"
                     /locus_tag="VIT19_05870"
     CDS             complement(1059..1388)
                     /gene="rplX"
                     /locus_tag="VIT19_05870"
                     /inference="COORDINATES: protein motif:HMM:TIGR01079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEY5838545.1"
                     /translation="MKGTKRAKIRKNDQVVVITGRDKGKRGRVLAVAPVKGKIKVESI
                     GMIKRHQKAAGNRGGGIIDRESWLDMSNVQIVDPQSGKPSRVRYHMDGDTKTRVATAS
                     GHTIESK"
     gene            complement(1432..1800)
                     /gene="rplN"
                     /locus_tag="VIT19_05875"
     CDS             complement(1432..1800)
                     /gene="rplN"
                     /locus_tag="VIT19_05875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEY5838546.1"
                     /translation="MIQMQTSLEVADNSGARRVEMIMGIGGSTGAIASLGDRIKVTVK
                     EATPDGAVKKGTVQDAVIVRTRKEVRRRDGTYIRFDQNAAVLIKEDGTPIGTRVFGPV
                     ARELRDKNFMKIVSLAPEVI"
     gene            complement(1883..>2027)
                     /locus_tag="VIT19_05880"
     CDS             complement(1883..>2027)
                     /locus_tag="VIT19_05880"
                     /inference="COORDINATES: protein motif:HMM:NF012586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEY5838547.1"
                     /translation="YVRRTSKFMAHDELGATIGDRVRIVETRPLSARKRWRVIEIVQK
                     AAK"
BASE COUNT          397 a          637 c          500 g          493 t
ORIGIN      
        1 ccctcctctt tgaggatgcg cgcaatctcc agcttcagct ttgacgccgg aacatcgaca
       61 cgcgagtgtt tggccgcgac ggcatttcga attcgcgcca acatgtcggc aataggatca
      121 gtcattcatt aactccaaaa aaaacgtccg ttgtcagttg tccgttgtca gtagctctct
      181 gtcgttcttt acaactgaca acggactact gaccactgac aaatcaccaa ctcgatttca
      241 cgacgccggg aatctgtccc tcgagcgcca actggcgaaa gcaaatacgg cacaggtgga
      301 acttgcgcag ataagcacgc ggccggccgc aacggcggca acgcgtgtac gcgcgcacag
      361 caaacttcgg cttgcgatta gctttcgcga ttaaagattt ttttgccata acaaaccaga
      421 tatcagaagt cagagatcag aggtcagtcg gatttgcgga gcgcctgatc tctgacctcc
      481 gacctctgcc ctctgccctc tgcttaagcc ctaaacggca ttcccaatgc ctttaacaat
      541 gcccgcgcct cttcgtcatt gcgggcggtc gtcacaatcg aaatattcat gccgcgcagc
      601 ttgtcgactt tgttgaaatc gatctcgggg aaaatgagct gctcgcgaac tccgattgtg
      661 taattgccgc gtccatcgaa agcctttggc gacacaccgc gaaaatccct gacgcgcggc
      721 agcgcgaccg acaccagccg atcaaagaac tcgtacattc gttcgccgcg caacgtcacc
      781 atcacgccaa tcggcatgcc ctgccgcaat ttgaaactgg cgatcgattt cttggcttta
      841 gtgatcaccg gcttctgacc ggcgatcgac gtcagctcaa cgacggccgt gtcgaggatc
      901 ttcgcgtttg cgaccgcctc gcccataccc atgttgagca caattttctc gagccgcgga
      961 atagccatcg ggttcttgat cgcaaattcc ttggcgatcg ccggggcgac gtctttttga
     1021 taacgctctt ttagtcttgc tgccattttc gtgaatcgct acttactttc gatcgtatgt
     1081 ccactcgccg tggcgacccg ggttttggtg tcgccgtcca tgtgatagcg cacgcgcgaa
     1141 ggcttgcctg attgcggatc gacaatctgc acgttcgaca tgtccagcca ggattcccgg
     1201 tcgatgatgc cgcccccacg attacccgcc gccttctgat gacgcttgat catgccgatg
     1261 ctttcgactt tgatcttgcc tttaaccggc gcgacggcca gcacgcggcc acgcttgcct
     1321 ttatcgcggc cggtgatgac aacgacctga tcgttctttc ggattttggc tcgtttagtt
     1381 cccttcaact cgttacctct cgccgcgatc ccggctcgcc gggctttcgc actagatcac
     1441 ttccggcgcc agcgaaacaa tcttcatgaa attcttgtcg cgcagttcgc gcgccaccgg
     1501 tccgaatacg cgagtcccga ttggtgttcc gtcttcttta atcagcaccg ccgcgttctg
     1561 atcgaaccga atgtaagtcc cgtcgcggcg acgcacttcc ttgcgcgtcc gcacgatgac
     1621 ggcgtcctgc actgtgcctt ttttcacagc accgtcgggc gtcgcttctt tcacggtgac
     1681 cttgattcga tcgccgagac tggcaatcgc gccggtcgaa ccgccaatgc ccataatcat
     1741 ctcgacgcgt cgtgctcccg aattgtcagc gacctccaga gaggtctgca tttgaatcac
     1801 tagctcactc cgttcgcggt ttcgggtttc gggagccagg tgtcaacttt gttttcgaca
     1861 cccggcacct gctgcctgtt acctatttcg ctgccttctg aacgatttca attacgcgcc
     1921 agcgctttct ggccgacagc ggccgcgtct caacaatgcg cacgcgatcg ccgatcgtgg
     1981 ctcccaactc gtcgtgcgcc atgaacttcg aagtccgacg gacgtaa
//
LOCUS       DATDBY010000317         2171 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1653801, whole genome shotgun sequence.
ACCESSION   DATDBY010000317 DATDBY010000000
VERSION     DATDBY010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1653801"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..821
                     /locus_tag="VIT19_05885"
     CDS             <1..821
                     /locus_tag="VIT19_05885"
                     /inference="COORDINATES: protein motif:HMM:NF013499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HEY5838548.1"
                     /translation="LCVKGLREEAGRAIVRARAARPFTSIDDLHLRAPELRKDELRKL
                     AAVGALNFIQSPRSNAHLKSNVQSPMSKVRNQMSDVGTHQDAAAQTLDDGHWTLDPPH
                     RRDALWQVERVAREPGPLYKKLEETGGSPLQAMTLNERLNADLRGTGITIGRHPMAHQ
                     RAWLDTMQVITAAQLRTMRNGNRVKVAGWVIVRQRPGTAKGFVFLSLEDETGIANIIV
                     TPQLFDGNRLALVNYPFLLIEGILQHQDNVISVKARRIEPLQMKIESPASHDFH"
     gene            complement(969..>2171)
                     /locus_tag="VIT19_05890"
     CDS             complement(969..>2171)
                     /locus_tag="VIT19_05890"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5838549.1"
                     /translation="AAGAQVDVYRTDLPGKFPSKANKNGEFVYAGLPYIGTYVIAVSA
                     PNASPTARGGVKVGRDIDFELVMTPGNGQRFTEEQAKAGGGGGTQNTASSGGGESAAD
                     RAKREEMEKKNAELIEANKKIENANQVIGDSFKAGNTALTAKNYDEAIRLYETGIAAD
                     IDHPGAPSLLTNKSVALRMRGVDRFNAAVKSADPAAKTSGLETAKADFKASADAANQA
                     VELLKKLTTPTDPNELKQLEANKYYALTARAESMRLFLTKVDGTKADDAVTAYHEYMA
                     VEPDAAKKTKAQYDLAQMLFDAGAYDKAKVEYEKILAEKPDDAEALSNMGLILFNFGA
                     LKEGEGKKDEAKAMYQQAANYLQQFVDKAPDAHKFKADAKAVLEALKSQQNVQAEKPA
                     GRPPRRRP"
BASE COUNT          437 a          637 c          594 g          503 t
ORIGIN      
        1 tgctttgcgt gaaaggtttg cgcgaagaag ccggtcgcgc gattgtgcgg gctcgcgcgg
       61 cgcgaccttt taccagcatc gatgatttgc atctgcgcgc tccggaacta agaaaggatg
      121 agttgcgcaa gctggcggca gtaggggctt tgaatttcat tcaaagtcca aggtccaacg
      181 cccatctaaa gtccaacgtc caaagtccaa tgtccaaagt cagaaatcag atgtcagacg
      241 tcggaactca tcaagacgcc gccgcacaga cattggacga tggacattgg actttggacc
      301 ccccgcaccg tcgcgacgcg ctttggcagg tcgaacgtgt agcgcgcgaa ccgggcccac
      361 tctataaaaa gttggaagag accggcgggt caccgctgca agcgatgacg ttgaatgaaa
      421 gattgaatgc tgacttgcgc ggcacgggca tcacgatcgg ccggcatccg atggcgcatc
      481 aacgcgcatg gctcgacaca atgcaggtca ttactgcggc ccagttaagg actatgcgca
      541 acggaaatcg agtgaaggtt gccggttggg taatcgtgcg tcagcgtccg gggacggcaa
      601 aaggattcgt atttctaagc ctggaagatg aaacgggaat cgcaaacatc atcgtgactc
      661 cgcaactttt tgatgggaac cgactcgcgc tggtgaacta tccgtttcta ctgatcgaag
      721 gaattttgca gcatcaggac aatgttatct cggtgaaggc gagacgcatc gagcctttgc
      781 agatgaagat cgaaagcccg gcctcacacg actttcatta ggtacgcacg cctctggcgt
      841 gctccttgtc ggcgcactaa aagcacgcca caggcgtgcg tacccgtgct ccaaaaagaa
      901 gaggcgggca acgcccgcct ctaaacgaag tcgaataaat tgcgggcagg gatgcccgcg
      961 ctcctggatt acggccgccg gcgtggcggt cttccggcgg gcttttccgc ctgcacgttc
     1021 tgttgactct tcaaagcctc gagtacagct ttcgcatctg ctttgaactt atgcgcgtcc
     1081 ggcgccttgt caacgaattg ctgcaagtag ttcgcggcct gctggtacat cgctttagcc
     1141 tcgtccttct tgccttcgcc ttcctttaac gcgccaaaat tgaaaagaat cagacccata
     1201 ttcgacagcg cctcagcgtc gtccggcttt tccgccagaa tcttctcgta ttcaactttt
     1261 gccttgtcgt acgcgccggc gtcaaagagc atctgggcca ggtcgtactg agccttggtt
     1321 ttcttggcag cgtcaggttc gacagccatg tactcgtggt aggccgttac tgcgtcatcc
     1381 gctttcgttc catccacctt cgtgagaaac aggcgcattg actctgcgcg cgccgtcagc
     1441 gcgtaatact tattggcttc taactgcttc aattcgtttg gatcggtagg cgtcgttagc
     1501 ttcttaagca attccaccgc ctgattagcc gcgtcggccg aagctttgaa atctgccttc
     1561 gctgtctcca ggccggaagt cttggcggct ggatcagcgg acttcaccgc cgcattgaac
     1621 cgatcgacgc cgcgcatccg cagcgcaacg gacttattcg tcagcaacga cggcgctccc
     1681 ggatgatcaa tatcggcagc gatgccggtt tcatagagcc gaatcgcctc gtcgtaattc
     1741 ttcgcagtca gagccgtatt tcccgccttg aacgaatcgc caatcacctg atttgcgttt
     1801 tcgatcttct tgtttgcctc gatgagctcg gcgttcttct tctccatttc ttcgcgcttc
     1861 gctctgtctg ctgcgctctc gccgccgcca ctggacgctg tattttgagt gccgccgcca
     1921 ccaccggcct tcgcttgctc ttcggtgaag cgctggccat tgcccggcgt catgaccagc
     1981 tcgaagtcga tgtcgcggcc gaccttcaca ccgccacggg cagtgggcga cgcattcggc
     2041 gcactcaccg cgatgacgta cgtgccgatg tacggcaagc ccgcgtaaac aaactctccg
     2101 ttcttgttag ccttgctcgg gaatttgccg ggcaggtcgg tgcggtaaac atcgacttgc
     2161 gcgccggcgg c
//
LOCUS       DATDBY010000318         4492 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2186774, whole genome shotgun sequence.
ACCESSION   DATDBY010000318 DATDBY010000000
VERSION     DATDBY010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4492
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2186774"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1507
                     /locus_tag="VIT19_05895"
     CDS             <1..1507
                     /locus_tag="VIT19_05895"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5838550.1"
                     /translation="SLLVQTPESLKARFNLDVRINTEVISIDRSACSIRVRETGTGRE
                     YDQAYDALVLSTGASPLKPPIPGIEHPNHFVVRSIRDVEKIMAWSKDCEGCRAVVVGG
                     GYIGLEMAEQLRRREFSVTVVEALPQVMAPLDPEMAAWLHAELRANGVALHLNDAVAS
                     FEPPSEDEPARASIVVLKSGQRFPADSVVLGLGVRPEIGLARDAGLEIGKLGGIRVNE
                     HLQTSDPQIWAVGDAIEVRDGVTDQWALIPLAGPANRQGRIAANNILGRPSRYEQTWG
                     TAILRLFNLAAGCTGANEKSLRRANIPFQAIHLHPNSHAGYYPGAEPIALKILFAPDS
                     GKLLGAQAIGHEGVDKRIDVLATALKAGMTVHDLAELELAYAPPYGSAKDPVNLAGMA
                     AQNVLAGDVALAQWNEVASLDASTTLLLDVRRIDERARGFIPGSTHIPLDELRLRLSE
                     LPREREIIAYCESGQRSYNAARILNQNGFRVRSLTGSYRTWKTAQADGQAS"
     gene            complement(1568..2407)
                     /locus_tag="VIT19_05900"
     CDS             complement(1568..2407)
                     /locus_tag="VIT19_05900"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEY5838551.1"
                     /translation="MIVSTAWLAGHLNDPKVVVLHVARERSHYDGGHIPGARFVGWGE
                     ITATRDGVPNELAPVADLQKLFERLGIGDDARIVLYGDNSGLSAARAYFTLDYLGHGV
                     RAALLDGGPEKWKAERRAISTDLVETKTARFTPRVRTSAVTNLDVVRDLSWTAVNVIS
                     PSAVLIDARPVDEYTGAKPGDGVPRGGHIPGAANVFWMKNVVSKDNPVLRSPAELRRL
                     YEEAGAAKGRTVVAYCRTGGQASHAYFTLKYLGFDVVMYDGSFFEWSNTEGTPIVAGS
                     EQK"
     gene            complement(2635..3195)
                     /locus_tag="VIT19_05905"
     CDS             complement(2635..3195)
                     /locus_tag="VIT19_05905"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY5838552.1"
                     /translation="MTTLIRKCTPAEARAAFLADNGCQIVDVREFSEYDAERVEGATL
                     ASLSALDQNLGLIERDRPVYLMCRSGNRAQQAAERLAGRGFKNLQVIDGGLQGWSEAG
                     LPVERGKGRVWSLERQVRFVAGLIVLTGILLSLISPWLVLLSAFVGAGLTFSAITDTC
                     GMGMMLARMPWNRRPKTGSDAVCASR"
     gene            3325..3687
                     /locus_tag="VIT19_05910"
     CDS             3325..3687
                     /locus_tag="VIT19_05910"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEY5838553.1"
                     /translation="MRAKHKQMTPAALAQVAARFKVLAEPIRLRILHGLQNGEMTVSE
                     ITEAVESTQPNVSKHLKMLQDAGLVARRQEGNTVYCSIADETVFELCDVVCSSLRERL
                     GAQAGAFGHAITPVKRRA"
     gene            4289..>4492
                     /locus_tag="VIT19_05915"
     CDS             4289..>4492
                     /locus_tag="VIT19_05915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838554.1"
                     /translation="MNPARYQEIGEPEIELANLFSAPSGFFQTSEINSSHPKEIETMK
                     NATSKSLRGLTALAAIFALSMMLA"
BASE COUNT         1003 a         1316 c         1265 g          908 t
ORIGIN      
        1 cagcctgctg gtgcagacac ccgagagcct caaggcgcgc ttcaatctgg atgtgcgcat
       61 caacactgaa gtcatcagca tcgatcggtc agcgtgcagc atccgcgtgc gcgaaacggg
      121 taccggacgc gaatacgacc aagcttacga tgctctggta ctttccacgg gcgcatcgcc
      181 actaaaacca cccatccccg ggatcgagca ccccaatcat ttcgtagtgc gaagcatccg
      241 cgacgtggaa aagattatgg cgtggtcaaa agactgcgag ggttgtcgcg ccgtcgtagt
      301 cggaggcggt tacattggac tcgaaatggc cgagcaactg cggcgccgcg agttctctgt
      361 gacggtggtg gaagcgctgc cccaggtcat ggcgccgctc gacccggaaa tggctgcctg
      421 gctgcacgcg gagttgcgtg ccaacggtgt cgcgttgcat ctgaacgatg ccgttgcctc
      481 gttcgaacca ccttcagaag acgaaccggc ccgcgcttcg atcgtggtgc tgaaaagcgg
      541 tcaacgcttt cccgccgact cagtcgtgct cgggttgggt gtgagacctg aaataggttt
      601 ggcaagagat gcgggtttgg aaatcggtaa actcggaggc atccgggtca acgaacacct
      661 ccaaaccagc gacccgcaga tatgggcagt gggcgatgct atagaggtgc gggatggagt
      721 caccgaccaa tgggcattga ttccactggc aggtccggcg aatcgacaag gccgcattgc
      781 cgccaacaat atcctcggcc ggccgtcgcg atacgaacaa acctggggca cagccatcct
      841 gcgcttgttc aatctggccg ccggttgcac gggcgcaaat gagaaatccc ttcgtcgtgc
      901 gaacattcca tttcaagcga ttcaccttca ccccaactcc cacgcgggct actaccccgg
      961 cgctgaaccc atcgcgctga aaattctgtt cgcgcccgac tcaggcaaac tgctcggcgc
     1021 gcaagccatc gggcatgaag gagtggacaa gcgcattgac gtgctggcca cagcgctcaa
     1081 ggccggcatg accgttcacg acctggccga attggaactg gcgtacgcgc cgccctacgg
     1141 atcggcgaaa gatcccgtca accttgccgg catggctgcg caaaacgtgc tcgccgggga
     1201 cgtggccctc gcgcagtgga acgaagttgc ttcgctcgac gcgagcacga cgctgctgtt
     1261 agatgttcga cgcatcgacg aacgagcgcg gggattcatt cccgggtcga cccacattcc
     1321 gctggatgag ttgcgcttgc gcctgagtga gttaccgcgc gaacgcgaga tcatcgctta
     1381 ttgcgagagc ggccaacgct cctacaacgc agcgcgcatc ctgaaccaaa acggcttccg
     1441 cgtgcgcagc ctgactggat cttatcgcac ctggaaaaca gcccaagcag acggacaggc
     1501 aagctgatat ggcgtgaccc ataacgaaca cgatcttggg agatagaatc atggaaatcc
     1561 tccaacgtca cttttgctcg cttcccgcaa cgatcggggt accctccgtg ttgctccact
     1621 cgaagaacga cccgtcgtac atcaccacat cgaacccaag atacttgagc gtgaagtagg
     1681 cgtgcgacgc ctgcccgccg gtgcgacagt aagccacgac tgtgcgaccc ttcgccgcgc
     1741 ctgcctcttc gtagagccgg cgcaactctg ccggagaacg tagcaccgga ttatctttgc
     1801 tcactacatt cttcatccag aagacatttg ccgcaccggg aatgtggccg ccgcgcggca
     1861 cgccatctcc cggtttagcc ccggtgtatt cgtcaaccgg tcgggcatct atcaataccg
     1921 cgctcggaga gatgacgttc actgcggtcc acgacaggtc gcgcaccaca tcgaggttgg
     1981 tgacggcact agtgcgcaca cgcggagtga accgcgccgt cttcgtctca actaaatcag
     2041 tcgagatggc gcgacgttct gccttccact tttccggtcc gccgtccagg agtgccgccc
     2101 gtaccccgtg accgagatag tcgagcgtga aatacgcgcg cgctgccgac agcccggagt
     2161 tgtcaccgta gagcacgatg cgcgcatcat cgccgatgcc caaacgctcg aagagttttt
     2221 gcaggtcagc cacgggtgcg agttcgttcg gcacaccgtc gcgcgtcgca gtgatctcac
     2281 cccagccgac gaaacgcgca ccggggatgt gacctccatc atagtgtgac cgctcgcgcg
     2341 ccacatgcag aacgacaacc ttcggatcgt tgagatgacc ggcaagccag gcggttgaga
     2401 caatcatctc tgaacgtacc gcctgcggct tctccttttg atgtgccctt ctttgtcctt
     2461 caacttggaa aggcacaagg aagaggacgc tggcgattgt caaaatagcg ccgaaaagaa
     2521 atcgagttcg ggttgaggtc cgtcgtaaat atttcatcgt tctttcctcc aagtgtcacc
     2581 aattgcccgg ctcaagatca gagccacaat gtatgcagat ccatcacggg cctcttaccg
     2641 acttgcgcaa accgcgtctg acccagtctt cggcctacga ttccaaggca tccgggccag
     2701 catcatcccc atgccgcacg tatctgttat tgctgagaac gtcagccccg ctccgacaaa
     2761 tgcggagagc agaacgagcc acggcgagat gagacttaga agaatgccgg tcagcacgat
     2821 gaggccagcg acgaaccgca cctgccgttc aagtgaccaa acgcgcccct ttccccgctc
     2881 gacggggagt cccgcttccg accatccctg gagtccaccg tcaatcacct gcaggttttt
     2941 gaatccccgc cccgccagac gctccgccgc ttgctgggcg cggttgccag accggcacat
     3001 caggtagacc gggcggtcac gttcgatcag ccccagattt tgatcgagcg ctgacagtga
     3061 ggcgagcgtc gccccctcga ctcgctccgc gtcgtactcc gagaactcgc ggacatcaac
     3121 aatctggcag ccgttatcag cgagaaaagc tgcgcgcgct tcagcgggag tgcattttct
     3181 gatcaaggtt gtcataggtt ggtctccaaa aatcaactgc tttttgaact tgcgtgtgtg
     3241 caaagccgca cgtatactgt gctcgcagat gacgatataa cgatgtggtg atatagtcaa
     3301 ctacgctctg aaggagagta agcagtgaga gctaaacaca agcaaatgac gccggcggcg
     3361 ttggcgcagg ttgcggcgcg tttcaaggtg ctggctgaac cgatcaggtt gcggattctc
     3421 cacgggcttc agaacggaga gatgactgtt tccgagatca ccgaggcggt cgagtccacg
     3481 cagcccaatg tcagcaaaca tctgaagatg ttgcaggacg ccggactggt ggcccggcga
     3541 caggaaggca acactgtcta ttgctcgatt gcggacgaga ctgtgtttga gctttgcgat
     3601 gtggtttgtt ccagtttgcg tgaaagactt ggagcccagg ccggggcctt cggtcatgcg
     3661 attacgcccg tgaaacgtcg cgcctgaaat ctgccggagt cgcttttttg gcgcaattcg
     3721 taggcaatct tgccgtcaca tacgtctcat gttcctgatt aaaaggggaa aggggccagg
     3781 gaggtaagag cattgggaag ggagtacaag aacaatggtt gaatggttat ggccggtatt
     3841 attaattgcc gcttacgtcg tgctgatgcg ctgggtgctg ccgcgtctcg gtgtcgcgac
     3901 ttgaatggct aactcttgcc gtgtcgagtc tcgaccgggt gaagtaaaga acaataagca
     3961 cgcagcagca gttggagacg cgacaggttc acatgaatta aaaccgcgat cctgacgacc
     4021 tctaccaagc aggctcggtt gcgacagcca tgcaatttcg caatctggtt agagtcgaaa
     4081 aggaaaagaa aatgagttcc cggcaaccac aacattcaaa taaggattca gtaagactgt
     4141 tgaggtttct ccccttatcc cagcagccga gcgaactcgt ctttcactac ccggtaacac
     4201 tcgcagacgg tcgctttcca gcttttggcg gtcgaggatc ttgagacgga atgtctgtta
     4261 gcgcaccgat ggagattccg tggtatggtt gaatcctgct cggtatcaag aaatcggcga
     4321 gcctgaaatc gaactagcta atcttttctc agctccctct ggatttttcc agacatctga
     4381 aattaacagc tcacacccca aggagattga aacaatgaag aatgctacct ctaaaagcct
     4441 tcgagggctg acggcactcg cggccatctt cgcgctctca atgatgctgg cc
//
LOCUS       DATDBY010000319         2312 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2865103, whole genome shotgun sequence.
ACCESSION   DATDBY010000319 DATDBY010000000
VERSION     DATDBY010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2312
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2865103"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1306)
                     /locus_tag="VIT19_05920"
     CDS             complement(<1..1306)
                     /locus_tag="VIT19_05920"
                     /inference="COORDINATES: protein motif:HMM:NF027439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY5838555.1"
                     /translation="MINFQTSPDQYKHWKLSFEGAVAKLSMDVAEDETLADGYKLKLN
                     SYDLGVDIELADAIQRIRFEHPEVRAVVVTSLKPRIFCAGANIYMLGTSSHAFKVNFC
                     KFTNETRCAIEDDSRASGRRYLAALNGTASGGGYELAIACDEIYLVDDGNSAVSLPEV
                     PLLGVLPGTGGLTRLVDKRKVRRDRADVFSTLAEGLKGKRAKEWGVIDDSFATSKFQE
                     AIDERVAQIVNLRSDGESQVNRTGIKLNPLQVESTEDTRDYKYVSLKLHRDKRFVDLL
                     VRAPEGDLPTSADEIQKLGEDYWPLRAYRELDDALLHLRVNEAEIGLVCIRTAGAIEN
                     ILAVDKALAANRDSWLVREIILYMSRVLRRLDLTAKSFFAIIEPGSCFAGNLFELVLA
                     SDRSYMLNNRDEKVEVALSELNTGAFPMSNGLTRLQSRFLAEP"
     gene            complement(1610..2086)
                     /locus_tag="VIT19_05925"
     CDS             complement(1610..2086)
                     /locus_tag="VIT19_05925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838556.1"
                     /translation="MRTYFFRFALALAAAFLLIPAVTQAQPRVARGRVYTKADVDRII
                     KRVEDRSDKFEKEFDRALDRSRLNNTRREDQLNDYAQDLERATDELRREFDRRDAWAE
                     NKAEVRKCLEIATKLNVAMRARRLGPKVESTWAALRSELNTLAGVYNLPPVGSAQY"
BASE COUNT          519 a          645 c          634 g          514 t
ORIGIN      
        1 tgggttcggc caggaagcgc gattgtaaac gcgtcagtcc attgctcatc ggaaacgcgc
       61 cggtattcaa ttcactcagg gcgacttcaa ccttttcgtc cctgttgttc agcatgtagc
      121 tgcgatcgga tgcgagcacc aactcgaaca aattgccggc gaagcaactg ccgggttcga
      181 taattgcgaa gaaactcttt gcggtcagat caagccggcg aagaacgcgc gacatgtaga
      241 ggatgatttc gcgcaccagc cagctgtcgc gattggccgc cagcgcctta tcaaccgcga
      301 gaatgttttc gattgctcct gcggtgcgaa tacaaactaa accgatctca gcttcgttca
      361 cgcgcagatg caggagcgca tcgtccaact cgcggtacgc acgcagcggc caatagtctt
      421 cgccgagttt ctgaatctca tcggctgaag tggggaggtc gccttccggc gcgcgcacga
      481 gcagatcgac aaagcgtttg tcgcgatgaa gctttagcga gacgtacttg taatcgcggg
      541 tgtcttcagt cgactcgact tgaagtgggt tgagcttaat tccggtgcgg ttaacttgcg
      601 actcgccgtc agaacgcaaa ttaacaattt gcgctacacg ctcatcaatg gcttcctgaa
      661 acttgctcgt cgcaaacgag tcgtcgatca ccccccactc tttcgcgcgc ttgcctttca
      721 agccttcggc cagggtggag aaaacatcag cccgatcacg ccgcactttg cgcttatcca
      781 ccagtcgcgt cagcccgccc gtgcccggca acacgccgag caaaggaact tcgggaaggg
      841 aaacggccga gttgccgtcg tcgaccaggt aaatctcgtc gcaggcgatc gcgagttcgt
      901 atccgccacc tgacgcggtc ccattcaagg cagccaggta gcgccggccg gaagctcttg
      961 agtcgtcttc aatcgcacag cgcgtttcgt tcgtaaactt gcagaaattg actttgaacg
     1021 cgtgcgacga tgtgcccagc atgtaaatgt tcgcgccggc gcagaagatg cgcggcttca
     1081 gactggtgac gacgacggcg cgcacttccg gatgttcaaa ccggattcgc tgaatcgcat
     1141 cggcgagctc gatatcgaca cccaggtcat acgaattcag tttcaacttg tagccatccg
     1201 ccagcgtctc gtcttccgcg acgtccatgg aaagctttgc gacggcgcct tcgaaagaaa
     1261 gcttccagtg tttgtattgg tccggagaag tttgaaagtt aatcatgaat gatgtctgcg
     1321 gcttgcgggc gagggcgccc gcgctccaaa ttcgaacgct cgttcgaaaa cgtgaatgat
     1381 aggagaacga ggaaggcggg tcaagcgccg aacaacatat gatgggaatc aaatgactct
     1441 ctgtgtctca gtgaattctc tgtgcctcgg tggtgggttg tttgaatgat attcaccaca
     1501 gaggcacaga gctcacacag agacacagtg aagaagtgga atccaggcat tcaaaacaat
     1561 agcgcggagt gaaagtcacc ccgcgccgct gttggaatgc gatcgattgt cagtattgag
     1621 ccgagccaac gggtggcagg ttgtaaacgc cggccagcgt gttcagttcg gatcgcaatg
     1681 ctgcccaggt gctctccacc ttcggcccga gccggcgtgc gcgcatcgcg acattaagtt
     1741 tcgtagcgat ttccaaacac tttcgcacct cagccttgtt ctcagcccac gcatcacgac
     1801 ggtcgaattc gcgacgcagt tcgtcggtcg ctctctccag atcctgggcg tagtcgttga
     1861 gctgatcttc gcgccgcgtg ttgttcaggc ggcttcgatc cagcgctctg tcaaactcct
     1921 tctcgaactt gtcactgcga tcttcgacgc gcttgataat gcgatcaacg tcggctttgg
     1981 tgtagacgcg tccacgcgca acgcgcggct gtgcctgcgt gacagcggga atcagcagga
     2041 aagcagctgc caaagccaaa gcaaatctga aaaagtaggt tctcatgttc tctccttctg
     2101 taggtggcac agactttagt ctgtgttttc gtgaattcac catcacagac tgaagtctgt
     2161 gccacttcat ccacagattc agacgcagtg cgaggaaagt ttggcgaaag aaaattggcg
     2221 gaggcgtgta ggaatcgaac ctacctgagc ctgctctcgc agtctcacta acggttttga
     2281 agaccgcgcc attcaccaga acagatgcgc ct
//
LOCUS       DATDBY010000320         2069 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1069998, whole genome shotgun sequence.
ACCESSION   DATDBY010000320 DATDBY010000000
VERSION     DATDBY010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1069998"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1632)
                     /locus_tag="VIT19_05930"
     CDS             complement(<1..1632)
                     /locus_tag="VIT19_05930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838557.1"
                     /translation="MKLRFPRDLYSQSLALILALAIFAAPLRAQQQPASPPPSQPEAA
                     TKPKLTFDTLLSTDSYKMYVEVRNVGTLLTTGGAGEIIDPIVKLADPGPQLKSLVKFL
                     RDNAEPLAGSRLMIASWPVRSDIPSTMAALEFASADEAAKFAPKLETFLPTVLPPVPV
                     DEPTPESSPPADVKTEAPAKLTEAKTKPAAPAAAKPKASPVPREMRSPFVLTQAGPLV
                     FISDRAFKIEKLRSPDTALLSEDKNFRVARDRFAAEPLFLFFNVALEDRNAPKPSPTP
                     VISDEERERLEREELLRITADVQPVPVEGVAMDVTVEGPKVEAVLSAGPLPSPTPPPT
                     KEQQAQTVASNQIGSMLSVLGQGQTQWPEAIGVALVLDNDEFAVRAILLQKENAKTMP
                     LPFVPQLISGPAVASEAASILPDDTEVLVTASIDFGSTYQEMKKQAEADLKQSRQLAA
                     SVTSDNAMDAFAQFEKKAGFKITDELLPVLGNELAIAASLKQANMANVMGVPTPPAKT
                     SSDPKDKNKPEPLPIVLIGIKNREAARRLLPRVLEG"
BASE COUNT          415 a          601 c          595 g          458 t
ORIGIN      
        1 accttcgagg acacgcggca gcagacgccg cgccgcctcg cgattcttta tgccgatcag
       61 aacgatcggc aggggctctg gcttgttctt atctttcgga tcgctggaag tcttcgccgg
      121 cggtgtcggc acgcccatca cattcgccat gttggcctgc ttcagtgacg ctgcgatggc
      181 caactcgttt ccgaggaccg gcaacagctc gtcagtaatt ttgaagcctg ccttcttttc
      241 aaattgcgcg aaggcgtcca tggcattatc agatgtgacg gatgcggcca gctgtcttga
      301 ttgctttaga tccgcttcgg cctgcttctt catttcttga taagtgctgc cgaaatcgat
      361 cgaggccgtg accaacactt ccgtgtcgtc ggggagaatg gacgccgctt ctgacgccac
      421 cgccggccct gagatcagtt gcggcacaaa cggcagcggc atagttttcg cgttttcctt
      481 ctgaagcaga attgcgcgca ccgcaaattc atcgttgtcg agcacgagcg cgacgccaat
      541 cgcttcaggc cattgtgtct gtccctggcc caacacgctc aacatgctgc cgatctggtt
      601 cgaagccacc gtctgcgctt gctgctcttt tgtcggcggc ggcgtcggtg atggcaacgg
      661 cccggctgaa agcaccgcct ctacctttgg tccttcgacc gtgacatcca tcgctacacc
      721 ttcgaccggc accggctgta cgtcggcggt tattctcagc agttcttcgc gttcgaggcg
      781 ttcgcgttct tcatccgaaa tgaccggcgt cggtgagggc ttcggcgcgt ttcgatcttc
      841 caaagcgaca ttgaaaaaaa gaaacaacgg ctcggcggca aaccgatcgc gcgccacgcg
      901 gaagttctta tcttcggaaa gcagcgcggt gtccggcgag cgcagcttct cgatcttgaa
      961 agctcggtcg ctgatgaaaa ccagtgggcc cgcttgcgta agcacaaagg gtgagcgcat
     1021 ttcgcgcggc actggagagg ccttgggttt cgccgcagcc ggcgccgcgg gtttagtttt
     1081 cgcctcagtt aatttcgcgg gagcttccgt tttcacgtca gctggcggag agctctcggg
     1141 cgttggctca tcaaccggga ccggcggcag gacggtcggc aaaaaagtct cgagcttcgg
     1201 cgcgaatttc gcggcctcgt ccgccgatgc gaattcgagc gcggccatgg tcgaaggaat
     1261 gtcactgcgc actggccagc tcgcaatcat cagtcgcgaa cccgccaatg gctctgcatt
     1321 gtccctgaga aacttgacca gcgactttag ttgcggccct ggatcagcaa gtttgacgat
     1381 cggatcgatt atctccccgg cgcctccagt cgtcagtagc gtccccacgt tacgcacttc
     1441 gacatacatt ttgtagctgt ctgtcgagag caacgtgtcg aaggttaact tcggcttggt
     1501 tgcggcttcc ggttgcgatg gcggcggtga agcgggttgc tgctgcgccc gtagcggtgc
     1561 ggcaaagata gcgagggcca gaatcagggc cagtgattga gagtaaaggt cgcgcgggaa
     1621 tcggagtttc ataactaatc ctcgatctaa gcgcttttag gaccgtcgaa gaataccaga
     1681 ttattaaggc cgtcgatgta acgacctctc attcacacct cgcttcagcg aggtgtctgg
     1741 ccttcccgtc agatgaagaa gccgttttaa cggcttctca ataaaaccgt tgaaaacggt
     1801 tcccgtccca atacccgcgc aaaaacacct cgctgaagcg aggtgtgaat gagatccaaa
     1861 ggcgtaacac cggtggccta cagagcgcgc tccagtcgct aatcggtgcc ataactgatt
     1921 tccatccggc gaatgcgcgt gccggcggca atcagaacca gcgcagtcac aatcagcagt
     1981 cccgggacag agatataggc gggcgtcggc tcaacgatga cggcgaatgg tccttcagag
     2041 accggcaccg gcaccagcga gttcaaata
//
LOCUS       DATDBY010000321         6143 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1881923, whole genome shotgun sequence.
ACCESSION   DATDBY010000321 DATDBY010000000
VERSION     DATDBY010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6143
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1881923"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(179..850)
                     /locus_tag="VIT19_05935"
     CDS             complement(179..850)
                     /locus_tag="VIT19_05935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838558.1"
                     /translation="MKVKHVFRQTSAIVAAIVMATALAAQNRPAKERSAKKEHKDKLH
                     DKAKKAGGAVVLRYRPNQGKIFSSLSDLSAHSDVVIVGRVLGHRPALTPSGNLITNNF
                     LVKVLEVRKGDLAGTRSITVSSPGGAYKFPDGTRAAVVPTGYKELEDGVIYALFLKAR
                     GNGANYRLISESQGAFALKQSGVEPADLDLKSPTMKHRGSTPVQFLRELHKAVPVKRR
                     FTPAS"
     gene            complement(847..2136)
                     /locus_tag="VIT19_05940"
     CDS             complement(847..2136)
                     /locus_tag="VIT19_05940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838559.1"
                     /translation="MTYRESKYFLRVVWFCCIVAPLFLWPVHPATQAQLNCPQLEPVI
                     TGTIVQRSRNAWQQYAAITVNIINNPPRNGVSYSFSAAEVTAITNALTRWRDSPTCAE
                     ISFVQFIVGPHDTTNFDFSGTYVSFAKDELPLNDGYPVLGRTELASNGAFLVHASTYI
                     DRRVTNIQAFEKTIAHEFGHTFGLRHCAGAEFCGSVMDNTPSYNDTTYGSTGPTACDA
                     QAAKAAGKYVCCGQLNQTCLGDPDCCVELGLECIGGTCGYPDDDCDPAEEWECWQYGG
                     IWDPYLCYCDYSCDPYGDEEWSCFVTSGTWDPENCVCWPNQGCNPGPYYPTPAGVTVD
                     YNYCHPWTGTVWNCHGSWITWTSYCQNGSVYNQYEQYTEACNDTWVPCGGGGGGGGGG
                     GGGGGGDCWWTGDCWCDYDWGICCDDWGCWEEEELMQ"
     gene            complement(2147..2962)
                     /locus_tag="VIT19_05945"
     CDS             complement(2147..2962)
                     /locus_tag="VIT19_05945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838560.1"
                     /translation="MDLNTVREKGRLVRKLAILALMVGGLVFSARAAVGGFLETLTNF
                     RFVSQPIAAQDKPGKVNVKDREDEFPIATFDAESPTGPEERNKRNSKGRRYNRRIGKV
                     QEKPNVAVITDSENPAEKLLALPINESDAVVIGNILTTAAFMSEDKTGVYSEFKVSVE
                     EVLKKKDSAALLANSNIVLERPGGRVKFPSGRVQLHTLEGQRMPLVGHRYLMFLRETG
                     NDGEYVLLVAYDLSSGVVVPLDHFQRQRTHQGSKVDAFISQVRASISVNQSRD"
     gene            complement(3019..3567)
                     /locus_tag="VIT19_05950"
     CDS             complement(3019..3567)
                     /locus_tag="VIT19_05950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838561.1"
                     /translation="MQEHAQKRIELIANLAIIITAVLLCAVLTKSLISKPETASRETV
                     SRDDVPSPVNRRPNPQIEPGTKLQIDGIDWAGNGQTLVIALSDKCRFCTESASFYQRL
                     MKGRGKTRVVAVFPQSDAEGKSYLEKLSVTVDEIKHTSFPAIGIRATPTLILMDANGS
                     ALKSWVGKLAADRETEVLDSLQ"
     gene            complement(3729..>6143)
                     /locus_tag="VIT19_05955"
     CDS             complement(3729..>6143)
                     /locus_tag="VIT19_05955"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEY5838562.1"
                     /translation="LSQQEFVSYLRRAGYVERGQQAETARGRYALDGSNIEVQPGTDA
                     MLDQTRAFEPLRVQFTRDGKSISALMSRDSGARLDRAHLEPELISSVTGPDRAKRRVV
                     GFNDLPDNLVKAITVTEDRSFFEHHGVNIRGIIRALVRRYDSDPNSPIARQGGSSITQ
                     QIVKNMLLSQETPWRRKVPEAYMSVILETRLSKQEIFALYSNLVYLGQQSGFAIHGFG
                     EASNAYFNKDVTTLTLPEAAFLAGIIRSPNRYNPYHNLETARARRNQVLESMAETGTI
                     SQEEAEQAKATELKIAPTKGRIDVSDAPYFADYVQNQLSDLITGQGADHLRIYTTIDM
                     DLQRAAYAAVTKQLAALDKIQAKRFPEGTVQASLVAMNADTGEIVAMVGGRDYSKSQF
                     NRAEALRQPGSVFKPFVYATALNTAYDGVPRVITPATVYKDEPKTFIYDSQQYSPGNM
                     GDKYSMQPVTLRDAMVKSLNVVTVDVAMEVTIGRVMNLAAKAGLPRVSRAYPAMALGT
                     AEATPLQIASAYTGFAANGRRISPTAINRITTGDGTTVAQPTAQTNEVLRPEVAYVMT
                     SFMKDVVNRGTGAPIRARGFKFNVAGKTGTSRDGWFAGYTPHLVCVVWVGFDDGAQLG
                     LTGAASALPIWTDFMNAALTIHPEWTGDWQVPSGIQEANIDPATGQLALANATTSRSE
                     LFINGTSPGSETNDAEDMAQDPSDATEDENNPQTEPASLPDPLPEPPKPKPTPKVYDS
                     DSNRLQGTITLDVDPATGFIAVDTCPVIRTRTFMIGHEPRKYCGPEYHKKASASPPAT
                     ARIRAN"
BASE COUNT         1286 a         1746 c         1637 g         1474 t
ORIGIN      
        1 cggaaatgct tgaggggatg ccgattcaag aagcgcgtgc cttgacgaaa gatgaaatcg
       61 tgaaggccgt cggtggtcta tcgtcgcgga aacatcacgc tgcggcgctc gcgatcgaga
      121 cactgcgatc agctttaaca gagctttaag aattcagagc ttaacgaatg tcgtggtttc
      181 aggaagccgg tgtgaatcgc cttttcaccg gtacggcttt gtgaagttcg cgcagaaact
      241 gaaccggcgt ggagccacga tgcttcatag tcggactttt cagatccaaa tccgcgggtt
      301 cgacacctga ttgtttaagg gcgaatgccc cctgactttc cgaaatcagc cggtaattgg
      361 cgccgtttcc gcgcgctttt aaaaacaacg cgtaaatcac accgtcttca agctctttat
      421 atcccgtggg gacgacagcg gcacgtgttc cgtccggaaa cttgtatgca ccacctggag
      481 agctgacggt tattgatcga gttcctgcca aatctccttt tcttacttca agaactttaa
      541 caagaaaatt attggtgatg aggtttccgc taggcgtgag cgccggccgg tggcctagga
      601 cgcggccgac tataacaaca tcgctgtgcg cactgaggtc gcttagactt gaaaagattt
      661 tgccttggtt tggacgatac ctcaggacga ctgcaccgcc cgccttcttt gctttgtcat
      721 gaagtttatc cttatgttcc ttttttgccg accgttcttt ggcaggtcga ttctgcgccg
      781 ccaaagccgt cgccatcaca atcgccgcca caatcgcgga tgtctggcgg aagacatgct
      841 taaccttcat tgcatcagct cctcttcttc ccagcagccc caatcgtcac agcagatacc
      901 ccaatcgtaa tcgcaccaac aatccccagt ccaccagcaa tcgccgccgc cgccgccacc
      961 tccgccgcca ccaccgccac cgccaccgcc gcatggaacc caggtgtcgt tgcaggcttc
     1021 agtgtattgt tcgtattgat tatagacact gccgttctgg cagtagctgg tccatgttat
     1081 ccaactgccg tgacagttcc agacggttcc cgtccagggg tgacagtagt tatagtccac
     1141 cgtaactcca gccggcgtcg ggtaatatgg ccctgggttg caaccctggt tcggccagca
     1201 aacgcagttt tccgggtccc aggtgccgct agtgacgaag cagctccact cttcatcgcc
     1261 gtaagggtcg caactatagt cacagtaaca aagatacgga tcccatattc ctccgtactg
     1321 ccagcactcc cactcttccg ccgggtcgca gtcatcatcg ggataaccgc aggtgccacc
     1381 aatacactcc agacctagct ctacgcaaca gtcaggatcc ccaagacaag tctggtttaa
     1441 ctgaccgcag cacacatatt tgcccgcggc cttggcggcc tgcgcatcgc aggctgtcgg
     1501 tccagtggac ccgtaggttg tgtcattgta gctaggcgta ttgtccatga cggaaccaca
     1561 gaactccgcc ccggcgcagt gccttagccc aaacgtgtgc ccaaactcat gagcgatggt
     1621 tttctcgaat gcctgtatgt ttgtcaccct gcgatcgatg tacgtcgaag catgaaccag
     1681 gaatgcgccg ttactggcca actcggttct gccgagcaca ggataaccgt cgttaagtgg
     1741 gagttcgtct ttggcgaaac tgacgtaggt acccgaaaaa tcgaaattgg tcgtgtcgtg
     1801 aggcccgaca ataaactgaa cgaaagatat ctcggcacag gttgggctgt ccctccaccg
     1861 ggtcaacgcg ttcgttattg ccgtaacttc tgcggcgcta aagctgtagc tcaccccatt
     1921 cctgggcgga ttattgatga tgttcacggt gatcgcagca tattgttgcc acgcgtttcg
     1981 cgaacgctgg acgattgttc ccgtaataac gggctccaac tggggacagt taagttgtgc
     2041 ctgagtagcc gggtgtaccg gccagagaaa caagggcgca acgatgcaac agaaccaaac
     2101 aacacgcaga aagtatttgc tttcgcggta agtcatggca ttacggtcag tcgcgcgatt
     2161 gattgacaga aatggacgcc cggacttggc tgatgaaggc gtctactttc gacccttgat
     2221 gtgttctttg ccgttgaaaa tgatcgagtg gaacaaccac gcccgaggac aaatcgtaag
     2281 ctaccagcag aacgtactcc ccatcgttcc cggtttcccg caggaacatc aggtaccgat
     2341 gccctaccag tggcatcctt tgtccctcaa gcgtgtggag ttgaacacga ccagagggaa
     2401 atttaaccct gccgcccggc cgctcaagaa cgatgttact gttagctaac aaggctgcgc
     2461 tgtctttctt tttgagcact tcttcgacag acactttgaa ttctgaatag accccggttt
     2521 tgtcttcaga catgaaagcc gccgtagtta atatatttcc gattacgacg gcatcgctct
     2581 cgttgatcgg tagcgcgagc agtttttccg cggggttttc tgagtccgtt ataaccgcga
     2641 cattcggttt ctcttgaact ttcccgattc gccggttgta gcgacggccc tttgagttgc
     2701 gtttgtttcg ctcctccggg ccagtgggac tctcagcgtc aaaggtggca atcggaaact
     2761 cgtcctctcg atcttttacg tttacctttc ccggtttgtc ttgagccgcg atcggctgcg
     2821 atacaaacct gaaattggtg agggtctcga gaaaccctcc gactgccgcg cgtgccgaga
     2881 acaccaagcc accaaccatc aaagccagga tagccagctt gcgaactaat cttcctttct
     2941 cgcgcacggt gtttagatcc ataagcttct cgttgcaaac tcgagaggca tcccgcctca
     3001 cagtcaaatc ttcgactcct actgcaagct atcaagtacc tctgtttctc gatcagcagc
     3061 caattttcca acccatgatt tgagagctga tccattggca tccattagga ttagagttgg
     3121 tgtggcgcgg atgcctattg ccggaaacga tgtatgtttg atctcatcga ccgtaacgct
     3181 aagtttctcc aaatagcttt ttccttcggc atcactctgc ggaaatacag ctactacccg
     3241 cgtcttaccg cgacctttca tgagacgttg ataaaatgac gcactctccg tacaaaagcg
     3301 acatttatcc gagagagcta tcaccagtgt ttgaccgttg ccggcccagt cgatgccatc
     3361 gatctgaagt ttggtaccgg gctcaatctg gggattcggc cgccggttta cggggctggg
     3421 tacgtcatct ctgcttaccg tctcacgtga ggcggtttcg ggctttgaga taaggctctt
     3481 ggtaagaacc gcgcacaaaa gaacggcggt tataatgatc gccaaattgg cgatgagttc
     3541 aattcgtttc tgagcgtgtt cttgcatggg gggtgaacac ctgaaacttc agcgaattac
     3601 tccccttcta caccccttgg gaacacgtag tcaagtctct tgctgattta tttaacgatg
     3661 tgacaccgcc agatagggct attcgtaacg cctgttgatg gagcttggtg gtcggcaacg
     3721 cgatcggact agtttgctcg gatgcgcgcc gtagcgggcg gcgaagcaga agccttcttg
     3781 tgatattccg gcccgcagta ctttctcggc tcgtggccga tcatgaaggt cctcgtgcga
     3841 atgaccggac aagtatctac cgcaataaat ccagtcgccg gatcaacgtc gagcgtgatg
     3901 gtgccttgca gccggtttga atcgctgtcg taaaccttcg gtgtcggttt tggtttcggc
     3961 ggttctggca gcgggtcagg caaacttgcc ggctcagtct gtggattgtt ttcatcttcc
     4021 gttgcgtccg aaggatcctg cgccatgtct tccgcgtcat tcgtttccga accgggcgaa
     4081 gttccgttga taaacaactc actgcggcta gtcgttgcgt tcgctagcgc caactgtccg
     4141 gtagccggat cgatgttggc ctcctgaatc ccggaaggca cctgccagtc gcccgtccat
     4201 tcgggatgaa ttgttaacgc cgcgttcatg aaatcagtcc aaatgggcag cgccgaagca
     4261 gcgcccgtca accccaactg cgcgccgtcg tcgaagccga cccaaacgac gcagactaaa
     4321 tgcggcgtgt agccggcgaa ccaaccgtcg cgtgacgtcc cggtttttcc ggcgacattg
     4381 aatttgaaac cgcgcgcgcg aatgggcgcg ccggtgccac ggttgacgac gtctttcatg
     4441 aacgacgtca tgacgtaagc aacttcaggt ctcagcactt cattcgtttg cgcggtaggc
     4501 tgcgcgacag tggtgccgtc ccctgtggtg attcgattaa tcgctgtcgg cgaaatgcgc
     4561 ctcccatttg ccgcgaatcc cgtgtaggcc gaggcgattt gcagcggcgt tgcttccgca
     4621 gtgcccagag ccattgccgg ataagcgcgc gacacgcgtg gcagccccgc cttcgcggcg
     4681 agattcatca cgcggccaat cgtgacttcc atcgcgacat cgaccgtgac cacgttcagg
     4741 cttttcacca tcgcgtcgcg cagcgtgacg ggctgcatcg aatacttgtc gcccatgttg
     4801 ccgggcgagt attgctggct gtcgtaaatg aaagtcttcg gttcatcttt gtaaaccgtc
     4861 gccggcgtga ttacgcgcgg cacgccgtcg tacgccgtgt taagcgcggt cgcatacacg
     4921 aatggcttga aaaccgatcc aggttggcgc aaggcctcag cccgattgaa ttggcttttc
     4981 gagtaatcac ggccgcccac catcgcgacg atctctccgg tgtccgcatt catcgccaca
     5041 agtgacgcct gcacagtgcc ttccggaaat cgcttcgcct gaatcttgtc gagcgcggcc
     5101 aactgttttg tgactgccgc gtaggctgcg cgctgcaaat ccatgtcgat cgtcgtgtag
     5161 atgcgcaggt gatcggcgcc ctggcccgtg atcaaatcgc tgagttggtt ttgcacgtaa
     5221 tcggcaaagt atggcgcgtc cgaaacatct atgcggccct ttgtcggcgc aattttaagt
     5281 tcagtcgcct tggcttgttc agcctcctcc tgactgatag tgccggtttc ggccatcgac
     5341 tcaagcacct ggttgcgtcg cgcgcgggcc gtttcgagat tgtgataagg gttgtaacgg
     5401 tttggactgc ggataatgcc ggcgagaaaa gccgcttcgg gcagcgtcag cgtcgtgacg
     5461 tctttattga agtacgcgtt cgacgcttcg ccaaatccat gaatcgcaaa gcctgattgc
     5521 tgtccgaggt aaaccaggtt gctatacagc gcgaaaattt cctgcttcga aagacgcgtt
     5581 tccaggatga ccgacatata cgcttccggc acttttcggc gccatggcgt ctcctgcgac
     5641 aacaacatgt ttttgacgat ctgttgcgtg atgctggaac cgccctgtcg cgctatcggc
     5701 gagttcggat cactgtcgta gcgccgcacg agcgcgcgaa taattccgcg aatgttcacc
     5761 ccgtgatgtt caaagaagga acggtcttca gtgacggtga tcgccttgac gagattgtcc
     5821 ggcaagtcgt tgaaaccgac gacgcgacgc tttgcccggt cagggccggt gaccgaactg
     5881 atgagttcag gttcaaggtg cgcgcgatcc aggcgcgcgc cgctgtcgcg actcatcagc
     5941 gcgctgatcg atttgccgtc gcgtgtgaat tgaacgcgca gaggttcaaa cgcgcgcgtc
     6001 tgatcgagca tggcgtccgt gccaggctgg acttcaatgt ttgagccatc aagcgcataa
     6061 cgaccgcgcg ccgtttcggc ctgctgcccc cgctcaacat acccagcgcg ccgcagatac
     6121 gagacgaatt cctgttgcga cag
//
LOCUS       DATDBY010000322         2916 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1028142, whole genome shotgun sequence.
ACCESSION   DATDBY010000322 DATDBY010000000
VERSION     DATDBY010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1028142"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..948
                     /locus_tag="VIT19_05960"
     CDS             <1..948
                     /locus_tag="VIT19_05960"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5838563.1"
                     /translation="TDSTNATPMRYNPAQRTVQLFSAFAQDEVILVKDRLRLTLGAKL
                     EHNDFSGFELQPNILVLWTPQNHQTFWGSVSRAVRAASRSDEDLRLNIAAFPGPRGMP
                     VVLAIVGNPDLKSERVTAYELGYRTQTGKRFSLDVATFYNVYDRLTKTEAGTPFLETD
                     PLPAHLVSPLIFKNVMRGETYGAETSLNVNVARQWRLAGSYSFIKLNMHIDPLSRANG
                     AEDVERSSPQNQFQFHSYVKLPRNLEFDASLYHVSRILQVPRYTRVDLRLGWRFFENV
                     EFSFAGQNLLDARHTEYGGVDAARRVISRSASGKLTWRF"
     gene            1027..1554
                     /locus_tag="VIT19_05965"
     CDS             1027..1554
                     /locus_tag="VIT19_05965"
                     /inference="COORDINATES: protein motif:HMM:NF025069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiR family protein"
                     /protein_id="HEY5838564.1"
                     /translation="MKIVLGCLLSLCFLGSLTSTVQAQSSEYQVKAAFLYNFAKFVDW
                     PGDALGNSNAPLIIGVMGDDPFGGALDQAISGKTINGRSLQVRRLRWGHDLRSCHILF
                     ISSSERKRLPQIIQSLRGASVLTVGDMGQFNQQGGIINFILEANKVRFEINSRGADQA
                     RLKISSKLLSLAKNR"
     gene            1584..>2916
                     /locus_tag="VIT19_05970"
     CDS             1584..>2916
                     /locus_tag="VIT19_05970"
                     /inference="COORDINATES: protein motif:HMM:NF028461.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEY5838565.1"
                     /translation="MQVFRNLSIKRKLTLMIMVISIFTLLLSFALIMTYDRILDRRAM
                     VRNLTTQAEIIGNNSTAAITFNDPESAKEVLTALKARPEIISAVIYTSDQKAFARYQR
                     ADQTVDSPPSDTQADGSFFAADRLTLNQQIKLDGTVIGTVILESDLLEMNSRLRKQLI
                     VRGIVILILVCIVFLLSSRFQRLISDPIAKLARTAKLVSAEKDYSVRAARQGNDELGL
                     LVDSFNEMLAQIQSRDQELQRHRENLEEEVLSRTAELRVMNTLLMTAKEKAEEASQAK
                     SEFLANMSHEIRTPMNGVIGMTGLLLDAELDVDQRDCAETIRSSGDALLTIINDILDF
                     SKIEAGKLEFDVVDFDLRNAVEETLELLTDRARAKKIEFASLVYSDVPTALRGDPGRL
                     RQVLTNLTGNSLKFTENGEVVVTAEREFEDDRSVMVRFSIRDTGIGISEKIQ"
BASE COUNT          689 a          784 c          799 g          644 t
ORIGIN      
        1 accgacagca ccaacgcgac cccgatgcgg tacaacccgg cacagcggac ggtccaactc
       61 ttcagcgctt tcgcacagga cgaggtgatt ctggttaaag atcgtctacg gctaacgctc
      121 ggcgcgaaac ttgaacacaa tgatttctcg ggattcgagc tacaacccaa cattctagtt
      181 ttgtggaccc cgcagaatca ccagaccttc tggggctccg tctcgcgcgc cgtgagagcg
      241 gcgtcacgca gcgatgagga tctgcggctt aatatcgcag cgtttcccgg tccgcgggga
      301 atgccggtcg tgcttgccat agtcggcaat cctgatttga agtccgaaag agtaactgcc
      361 tacgagcttg gctatcgaac gcagactggc aagcggttct cgctggacgt tgcgacgttt
      421 tacaacgtct acgatcgctt gacgaagact gaggcgggaa cgcctttcct ggaaaccgat
      481 cctttgcctg cccacctggt cagtccgctt attttcaaga atgtaatgcg gggcgaaacc
      541 tatggcgcgg agacttccct gaacgtgaat gtggcgcgcc agtggcggct ggccggctca
      601 tactcattca ttaagttaaa tatgcacatc gaccctttaa gtcgggccaa tggcgccgag
      661 gacgtcgaac gtagcagccc ccaaaatcaa tttcagtttc attcttacgt gaaactgccg
      721 cgcaaccttg agttcgacgc ctcgctttac cacgtatctc gcattctgca agtgccgcgt
      781 tacacgcggg ttgatcttcg cctgggatgg cggtttttcg aaaacgtcga gtttagcttc
      841 gccggtcaga atctcctgga tgcccggcac acggagtacg gcggggtgga cgcggccagg
      901 cgggttatta gtcgcagcgc gagtggaaag ctcacttgga gattctaagt gaaccaactt
      961 atctcaaatg acgcgaagcc aggaagccta actgagccgc catcttcggg tagaaactca
     1021 ttcgccttga aaatcgtttt gggttgcttg ctaagcctct gttttctcgg cagtttgacc
     1081 agcacggtac aagctcaatc cagtgagtat caggtcaaag cagcttttct ctataacttt
     1141 gcgaagtttg ttgattggcc aggcgacgcc cttggcaaca gcaacgctcc gctcatcatt
     1201 ggggtgatgg gcgacgaccc gtttggcggc gcgctcgatc aggcaatcag tggcaagaca
     1261 atcaacggcc ggtccctgca ggttcgccgg ttgaggtggg gacacgacct ccgctcctgc
     1321 cacatcctct tcatcagttc ctccgagcga aagcgactac cacagattat ccaaagtctc
     1381 agaggcgcca gtgtcttaac ggtcggcgac atggggcagt ttaatcaaca gggcggcatc
     1441 atcaatttca tcctggaggc aaacaaggtg aggttcgaaa tcaattcgcg cggggcagac
     1501 caggcgcgat tgaagatcag ttcgaagctc ctgtcactgg cgaaaaaccg ctaggaatct
     1561 ggatcattca gggaacaacc acggtgcaag ttttccgaaa cctctcaatc aaacgaaagt
     1621 tgacgctgat gatcatggtc atcagtatct tcacgttact cttgtcgttc gccttgataa
     1681 tgacctacga ccgcattctc gatcggcgcg cgatggttcg caatctgaca acccaggccg
     1741 agatcatcgg gaacaatagc accgccgcga tcaccttcaa cgatccggaa tcagccaaag
     1801 aggtactgac ggcgctgaaa gcccgtcccg agattatttc cgctgttatt tacaccagcg
     1861 atcaaaaggc atttgccaga taccagcgcg ctgatcagac agttgattcg ccaccatccg
     1921 acacgcaagc tgatggcagc ttctttgccg ctgatcgtct gaccttaaat caacagatca
     1981 agctggacgg taccgtgatc ggcacagtca tccttgagtc tgacttgctg gaaatgaact
     2041 cgcggctcag gaagcagctt atcgttcgtg ggatcgtcat tctgatattg gtctgcattg
     2101 tcttcctgct ttcatcaaga ttccagcgtc tcatctccga tccgatcgcc aaattagcgc
     2161 ggacggcgaa gcttgtgtcg gccgaaaaag actactcggt gcgcgctgcc aggcagggca
     2221 acgatgaact cggtcttttg gtagacagct ttaacgagat gctggcgcag attcaatccc
     2281 gggaccagga actgcagcgt catcgcgaga atttggaaga agaagtcctc agccgcaccg
     2341 ctgagctcag agtaatgaac acgctgttga tgacggccaa agagaaggcc gaagaggcca
     2401 gccaggcgaa gagtgagttt ctggcgaata tgagccatga aattcgcacg ccgatgaatg
     2461 gggtgatcgg gatgaccggc ctcctgctcg acgcggaact cgatgtcgac cagcgcgact
     2521 gcgctgagac gattcgctcc agcggcgatg ccttgctcac gatcatcaac gacattctcg
     2581 acttctcaaa gatcgaggcg ggcaagcttg aattcgatgt agtggatttt gatctccgga
     2641 atgcggttga ggaaacgttg gaactgctga cggatcgggc gcgcgcgaag aaaattgagt
     2701 ttgcttcgct ggtttacagc gatgtgccta cggccctgcg gggtgacccc ggccggctca
     2761 ggcaggtact aacgaacctg actggaaact ctttgaaatt tactgagaac ggcgaagttg
     2821 tggtaaccgc cgaaagggaa ttcgaagacg acagatccgt gatggtgcga ttctcgatcc
     2881 gcgataccgg cataggaatc agtgaaaaga tccaaa
//
LOCUS       DATDBY010000323         3436 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_447820, whole genome shotgun sequence.
ACCESSION   DATDBY010000323 DATDBY010000000
VERSION     DATDBY010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3436
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447820"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1344)
                     /locus_tag="VIT19_05975"
     CDS             complement(<1..1344)
                     /locus_tag="VIT19_05975"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEY5838566.1"
                     /translation="MAEKKTESNKLVRGLGLLDGTMIVIGSMIGSGIFITSAESSRLI
                     GAPGWLLVAWALAGFMTITGALCCAELAAMMPRAGGPYVFLRQAYSPGMGFLFGWSMF
                     LVIQTGTIAAVAVAFANFTGVLITGIDANNYLIAPRRLGGYALSLSTAQLIAIAMIAV
                     LTLTNMRGLKTGKFIQNTFTFTKTAALIGLIVLGLLVGWNSGSAAYTSSWWDSWANGW
                     NPQVAQPGLAIAGGFALVMMLGRAMTGPLFAQSAWNNVTFTGGEIENPGRNLPLSLFI
                     GCGVVVVLYLLANLAYVVTLPLAAIQGAPQNRVAAATMQAIFGPPGATIMAAAIMIST
                     FGCNNGLILAGARVYYAMARDGLFFNRVATLNKHHVPAVALIAQGIWACLLTLPRTVT
                     TDPNTGVVTYGNVYTQLLEYIISADLIFYALMVGAVIVMRRKAPELNRPYRTLGYP"
     gene            complement(1620..2039)
                     /locus_tag="VIT19_05980"
     CDS             complement(1620..2039)
                     /locus_tag="VIT19_05980"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HEY5838567.1"
                     /translation="MKLKLAHGLAIRKSAINGKGCFATTHFKRRRKIAEYAGERISDL
                     EARQRARNRQVLRICDIDGQFSLDGARGGNGTHYINHSCEPNAFMRTLYGHVLFFALR
                     DIRPGEEITIDYEQTLHPDSKRCACGAPTCRGKINKQ"
     gene            complement(2209..>3436)
                     /locus_tag="VIT19_05985"
     CDS             complement(2209..>3436)
                     /locus_tag="VIT19_05985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838568.1"
                     /translation="LDNMAKHGRGEVEYVALNDDGSAAARRFHQRVRNPLLTDISIDW
                     NGLPVADVYPKQIPDLFSAKPLIITGRYTASGQRVIKLKGKMSGRDFVREIPVEFHDW
                     QTQHHVLATLWARTRVDDLMAQDLNGAQAGTMKEDLKQTITQLGLDYRLMTQFTSFVA
                     VEEMVVTDGGQPRRIDVPVEVPEGVNRETVISEQHSSLGLMFSRRRIQSLPTSSRGTV
                     NQVVTVTSSAPTINSTNAELKSTIDLSPGTGATKNRAPRPKPKSQRGTGDSSGSGGGI
                     GYGVGGAGGGTPSPTPMPEGDGVRKLSADEQKRADLQSKLHPSLLAIVDRLKDPKLAA
                     AADEGKFVREGKADVQIWLTEKSDATLAKLKALGFEVVLDPKSAKLVIGRLSIEKLAA
                     LAEIAEVRYVAPQTMR"
BASE COUNT          741 a         1019 c          957 g          719 t
ORIGIN      
        1 tggataaccg agagtccgat acggccggtt gagttccggg gccttccttc gcatcacaat
       61 tactgcgccg accatcaacg catagaagat caaatctgcc gagatgatgt attccagcag
      121 ttgcgtgtaa acgttgccgt acgtcaccac gcccgtgttc ggatcggtag tcacggtgcg
      181 cggcagcgtc agcagacacg cccaaattcc ctgcgcgatt aatgcgaccg ccggaacgtg
      241 atgcttgttg agcgtagcca cacggttgaa gaacaaaccg tcacgcgcca tcgcgtagta
      301 cacgcgtgcg ccggcgagaa tcaaaccgtt attgcatccg aacgtcgaga tcatgatcgc
      361 cgccgccatt atcgtcgcgc ccggcggacc gaagatcgct tgcatagttg cggccgcaac
      421 gcggttctgc ggcgcacctt ggattgccgc gaggggcaga gtgactacgt aagccagatt
      481 cgccagcaga taaagaacga cgactactcc gcagccgatg aaaagcgaca aaggcaggtt
      541 gcggccggga ttctcgatct cgccgccggt aaacgtcacg ttgttccagg ctgattgcgc
      601 gaacaacggt ccggtcatcg ctcggcccag catcattacc aatgcgaagc ccccggcgat
      661 ggccagcccc ggctgtgcga cttggggatt ccaaccgttg gcccaggagt cccaccatga
      721 agatgtgtac gctgcgctgc cgctgttcca accgacaagc aggccaagaa cgatcaaccc
      781 aattagggcc gctgtcttgg tgaacgtgaa agtgttttga atgaacttgc ctgtcttcag
      841 gccgcgcatg ttcgtaagcg tcaaaacagc aatcatcgcg atcgcgataa gttgcgccgt
      901 cgagagactg agcgcgtacc cgcctaaccg ccgcggcgca atcagatagt tattcgcgtc
      961 gatgcctgtg atcagaacgc cggtgaagtt cgcgaacgcg acggcgacgg cggcgatcgt
     1021 tccggtttga atgacaagga acattgacca accgaacagg aaccccatgc ccggactgta
     1081 agcttgccgc agaaaaacgt aaggcccacc cgcgcgtggc atcatcgcgg cgagctcagc
     1141 acagcataga gcgccggtaa tcgtcatgaa tccggccagc gcccaggcaa ctaacaacca
     1201 gcccggcgcg ccaatcaatc gcgacgactc ggctgaagtg atgaaaatac ctgagccgat
     1261 catcgagccg atcacaatca tcgtgccgtc gagaaggccg aggccgcgga cgagtttgtt
     1321 cgattcagtt ttcttttccg ccatggttgc tggctactat cccaaccagt catcagaagt
     1381 caacggaaat ttacgcggac tggagcgcag gcgtattcgc tgacagcatt catttctgta
     1441 accaaagcgt tcacgcctgg gacagcgaag gaagaatagt taattgagcc tactgcagga
     1501 gactttcaga cccaaagccc atgaatgggc tgacgacggc tataaataac cgtactccca
     1561 ggcgtaaacg cctgggctac agaaaatgca acccagtaag cggcacgctt gcgctcccgt
     1621 cactgcttat taattttccc gcggcaggtg ggtgcgccac acgcgcaccg cttggaatcg
     1681 ggatggagcg tctgctcgta gtcgatcgtg atttcttcgc cgggccggat atctcgcaag
     1741 gcaaagaaca agacatggcc gtacaaagtt ctcatgaagg catttggttc gcaggagtga
     1801 ttgatgtagt gcgtgccgtt gccgccgcgc gcgccgtcca ggctgaactg cccatcgatg
     1861 tcgcagatgc gcaagacctg acgattgcgg gcgcgctgac gagcttcaag atctgagatc
     1921 cgctcgccgg cgtactcagc tatctttcgc cggcgtttga aatgcgtggt ggcaaagcag
     1981 cccttgccgt taatcgcgga tttgcgaatt gcgaggccat gcgcgagttt gagcttcatc
     2041 gcgcaagatt gtacgaatca agcgagcggg ggtaaaccgc ccttcctgac ctgagaggtg
     2101 gctcactggc gcgttgctgt ccgacttgaa taggcgtcaa gctcggagaa acttcgcaat
     2161 caccatcatc tcaaggtccg gaagggtggt ttacccccgc ttgattactt aacgcatcgt
     2221 ctgcggcgcg acgtagcgca cttccgcaat ctccgcgagc gccgccagct tttcgatgga
     2281 cagacgacca atgacaagct ttgcgctctt cggatccaga accacttcga atccgagcgc
     2341 tttcagcttc gccaatgtcg catctgattt ttccgtcaac cagatttgca cgtcggcctt
     2401 gccctcgcgg acaaacttcc cttcgtcggc cgcagcggcg agcttcgggt ctttgagacg
     2461 atccacgatg gcgagcagcg atggatgaag tttcgactgc aagtcggccc ttttctgttc
     2521 gtcggctgac aatttccgca cgccgtcccc ttccggcatc ggtgtcggcg aaggcgtgcc
     2581 cccgcctgcg ccaccgacac cgtagccaat ccctccgccg ctgccgctgc tatcaccggt
     2641 gccgcgctga gatttaggtt tcggacgcgg cgcgcgattc ttcgtagcgc ccgttcccgg
     2701 actcaggtcg atggtagact tcaactcagc atttgtgctg ttgatggttg gcgctgaact
     2761 tgtaacagtt accacttggt ttacggtccc tctcgaagaa gtgggaaggc tttggatgcg
     2821 ccggcgactg aacatcaagc ccaagctcga atgttgctcg ctaatcacgg tctcgcgatt
     2881 gacgccctcc ggtacttcca ccggaacatc tatccgacgc ggctggccac cgtcggtcac
     2941 gaccatctct tcaactgcga cgaacgaagt gaactgcgtc atcagccgat aatccaagcc
     3001 gagttgggtg atcgtctgtt tcaggtcttc cttcatcgtt cctgcttgcg ccccgttgag
     3061 gtcctgcgcc atcaagtcat cgacacgagt gcgcgcccag agagttgcca gcacatgatg
     3121 ctgagtctgc caatcgtgaa actcgactgg aatctcgcgc acaaagtcac gccccgacat
     3181 tttgcctttc agttttatta cgcgctgtcc tgaggctgtg taccggccgg tgataatcaa
     3241 cggctttgcg ctaaagagat cgggaatctg tttgggatag acatccgcca ccggcaggcc
     3301 attccaatca atcgagatgt cagtgagcag cggattgcga acgcgctggt gaaaacggcg
     3361 cgcggcggct gacccatcgt cgttcagcgc gacgtattcg acctcaccgc gaccatgctt
     3421 tgccatgttg tcgagc
//
LOCUS       DATDBY010000324         3629 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_710137, whole genome shotgun sequence.
ACCESSION   DATDBY010000324 DATDBY010000000
VERSION     DATDBY010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3629
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_710137"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..811
                     /locus_tag="VIT19_05990"
     CDS             71..811
                     /locus_tag="VIT19_05990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838569.1"
                     /translation="MQPKRSKYDTNPLDGNVAEHADREWGRDTGSRDDPPTQSMSGGV
                     TSEIGRTSNQAARSNPETEAPTRRIDDSYRSVFAYGQTQATTYQPPRMPDANIYQPPP
                     GPPPQFYQRPPGPVDAKPGSQKVAGLGIPEKWAVMLPYIPFFIAMIASIIELLLVPRT
                     EKRVRFHAAQGLVLQIGVTGISTILGFANLFSGRFTGASLFSAATFVFLIISMVRVWQ
                     GKPHHIALLDPATNWIEDKINPRNQSLS"
     gene            990..2540
                     /locus_tag="VIT19_05995"
     CDS             990..2540
                     /locus_tag="VIT19_05995"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF012589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046316 - gluconokinase activity [Evidence
                     IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA];
                     GO_process: GO:0046177 - D-gluconate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEY5838570.1"
                     /translation="MSTVFDEAVLEERPEIDLSTLPSVRPEPDPVVVLALDIGTSGTR
                     AALFDRRGDQIEGSFLHVPAGEYSELLSGNDVNADALVASVAELLDAAVERAEEFVAR
                     IDYVAAASFWHSLIGVDDAGHAITPLLGWADTRASAAVLELRELLPETETHARTGCRF
                     HPSYWPAKLLWLRKSSPDVFSRVRRWLSFADYLYLQLFENSATSVSMASATGLMNQTT
                     CAWDEETLSALGIDESFLPPVVAPRRTAGGLRDEFMLRWPMLERATWFQAIGDGAANN
                     IGAGCVSRERVALTVGTSGAMRMLSSRAAPTTLPPELFCYRADRERVVIGGALSDGGG
                     LLRWLQNSLKLTDDSELNGLLEAYEPDSHGLTILPFWSGERAPGWSSSAAGTIHGLTA
                     VTKPLDIARAALESIAYRFALIANPLESFAPAASITIAGKVFLLYPAWAQMMADVLGQ
                     PIELSAFPEATIRGAALLALETIGTIDTLETIKSEPVRTFVPDMGRHEVYRRAVERQQ
                     DLYRRLLT"
     gene            2565..>3629
                     /locus_tag="VIT19_06000"
     CDS             2565..>3629
                     /locus_tag="VIT19_06000"
                     /inference="COORDINATES: protein motif:HMM:NF012670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838571.1"
                     /translation="MSARMQQTLETTPELDQLCINTIRTLAIDAVQKANSGHPGLPLG
                     AAPMAYVLWTRFMRYNPKNPKWENRDRFILSAGHGCMLLYALLYLTGYELSLDDIKNF
                     RQWESQTPGHPENILTPGVEVTTGPLGQGFANGVGMAMGSAHLGAKFNEKDFPLVDHY
                     VYAIVSDGDLMEGVAAEAASLAGHLKLGKLIYLYDDNKVTIEGFTDLAFSEDVPKRFE
                     ACGWHTSTVEDGNDLAAIEAAIRDAQAVADRPSLISVRTTIGYGMPTAGTRKAHSDPP
                     GADAVRETKRHLGWPEDKEFFVPEEALAHFRRSVDRGAQHENEWRALVDEYLKKNPEQ
                     GKLWQQMMSGELPADWEKHLP"
BASE COUNT          765 a         1052 c         1064 g          748 t
ORIGIN      
        1 ggtcgaatat caaacactga cggcttgagt cgctgaaacc ggagacaaca ggcgctcgta
       61 gaactctcta atgcagccaa agcgcagcaa atacgacacg aatccgctgg acggaaacgt
      121 cgccgaacac gccgaccggg aatggggtcg agacaccggc tcacgtgacg acccgccaac
      181 gcagtccatg agcggcgggg tgacgagcga aatcggccgc acgtccaacc aggcggcacg
      241 cagcaatcca gagactgaag ctcccacgcg tcgcatagac gattcgtatc gttcggtatt
      301 cgcgtatggc caaactcagg ccacgacata tcagccaccg cgcatgcctg acgcgaacat
      361 ctatcaaccg ccacccgggc cgccaccaca gttttatcag cgtccgccgg ggccggttga
      421 cgccaagcca ggctcgcaaa aagttgccgg cttaggcatc cccgaaaaat gggcggtgat
      481 gcttccttac ataccatttt tcatcgcgat gatcgcctca ataatcgaat tactgcttgt
      541 cccgcgcacg gagaagcgcg tgcgatttca cgcggcgcag ggactggtgc tgcaaattgg
      601 cgtgacgggg atcagcacca ttctcggatt tgccaattta ttctccggca gattcaccgg
      661 cgcaagtttg ttttccgcgg ccacttttgt gtttctgatt atctcgatgg ttcgggtgtg
      721 gcaaggaaag ccacatcaca tcgcgttgct ggatccagcg acaaactgga tcgaggataa
      781 gatcaacccg cgcaatcagt cgctctctta agtgccgctt tgactggagc gcaaccgtct
      841 cgcttgcatg gctggctcac caccgacgat ggctgcaagc gggacgcttt gcgctccagt
      901 cgaaaacact ggacgagtca cggcggttgt gcgatgctca cgttccattc ctcgtaagta
      961 gtctgattta acgtccgaat cacgcaccga tgagtaccgt cttcgacgaa gcagttctcg
     1021 aagagcgacc tgagatagat ctatccacgc tgccttctgt gcggccggaa ccagacccag
     1081 tcgtggttct cgcgctcgac atcggcacgt cgggaacgcg cgcggccttg ttcgaccgcc
     1141 gcggagatca aatcgaaggc tcgttcctgc acgtgccggc cggcgaatat tcggagctgc
     1201 tttccggtaa tgacgtgaac gccgacgcgc tggttgcctc tgtcgcggaa ctgcttgatg
     1261 ccgcggtcga gcgcgcagag gaattcgtcg cacgcatcga ctacgttgcg gcggcgtcct
     1321 tttggcacag cctgatcgga gttgacgatg ccggtcacgc catcacgcct ttgctcggct
     1381 gggccgacac gcgtgcgtca gcagccgtac ttgagctgcg cgagctgctt ccggaaactg
     1441 aaacgcatgc gcgcacgggt tgtcgttttc atccgagcta ttggcccgcc aagttgctgt
     1501 ggctgagaaa atcttctccc gacgttttca gtcgcgtccg gcggtggctg tcatttgctg
     1561 attatttgta tcttcagctc tttgagaatt cggcgaccag cgtatcgatg gcctcggcca
     1621 ccgggttgat gaatcagaca acatgcgcat gggacgaaga aactttgtcc gcattgggca
     1681 tcgacgagag tttccttccg ccggtcgttg cgccgcgaag gactgccggt ggattgcgtg
     1741 acgagttcat gttgcgttgg ccgatgctgg aacgcgccac ctggtttcag gcgattggtg
     1801 acggtgcggc aaataacatc ggcgccggct gcgtgtcgcg cgaacgcgtc gcgttaacgg
     1861 tgggaacatc cggcgcgatg cgcatgctgt ccagccgtgc cgccccgaca accttgccgc
     1921 cggaattgtt ttgctatcgc gctgatcgcg agcgcgtggt gattggcggc gcgttgtctg
     1981 acggcggtgg gcttctccgt tggcttcaga actcgctcaa gctaactgac gactccgaac
     2041 tcaatggttt gctcgaagcg tacgagcctg actcacacgg cctcaccatt ctgccgttct
     2101 ggtcaggcga acgcgcaccg ggctggtcga gctcggccgc gggaacaatt cacggcctga
     2161 cggcagtgac gaaaccgttg gacatagcgc gcgcggcgct tgaatccatc gcttaccggt
     2221 tcgcattgat tgcgaatccg ctcgagtcct ttgcgccggc agcttcgatc acgatcgccg
     2281 gcaaagtctt cttgctatat ccggcctggg cgcagatgat ggccgacgtt ctaggccaac
     2341 cgatcgagct ttctgcgttt cccgaagcca caattcgggg cgcggctttg cttgcgctcg
     2401 aaacgattgg cacaatagac actctcgaaa caattaagtc agagccggtc cgaacttttg
     2461 tgcctgacat ggggcggcat gaagtctatc ggcgagccgt ggagcgacaa caggacttgt
     2521 atcgtcgcct gctaacttga aacctgaaac ctggaacctt caacatgagc gcaagaatgc
     2581 agcaaacact cgagaccaca cccgaactgg atcaattgtg cattaacacg attcgcacgc
     2641 tggcgattga cgcagtgcaa aaagcgaact caggccatcc cggcttgcct ttgggcgccg
     2701 cgccgatggc ttacgttctg tggacacgct tcatgcgcta caacccaaag aatccgaaat
     2761 gggaaaaccg cgatcggttc atcttgtccg cgggccacgg ctgcatgttg ctctacgcgc
     2821 tgttgtatct gacggggtac gaactttcgc ttgatgacat caagaatttt cggcaatggg
     2881 aatcgcagac gccgggacat ccggagaaca tcttgacgcc gggcgtggaa gtcacgaccg
     2941 gcccattggg tcagggtttc gccaacggtg tgggcatggc gatgggctcg gcgcatctgg
     3001 gcgcgaagtt caacgaaaag gattttccgc tcgtcgatca ttatgtttac gcgatcgtct
     3061 cagacggtga cttgatggaa ggtgtcgctg ccgaagccgc gtcgctcgcc ggacacttga
     3121 aactcggcaa gctcatttac ctctatgacg acaacaaggt gactatcgaa ggcttcaccg
     3181 acctggcctt ctcagaagac gttccgaaac gatttgaagc ctgcggctgg cacacttcaa
     3241 cagttgaaga cggcaacgac ctggccgcga tcgaagcagc gattcgtgac gcgcaagctg
     3301 tcgccgatcg gccttcgctg atttcggtgc ggaccacgat cggttacggc atgccgacgg
     3361 cgggcacgcg taaagcgcac agtgatccgc cgggcgcaga cgccgtgcgt gagacgaaac
     3421 gacatctcgg ctggccggaa gacaaagagt ttttcgtgcc ggaagaagct ttggcgcact
     3481 ttcgccgcag cgtagatcgc ggcgcgcagc acgaaaatga atggcgcgcg ctggtcgacg
     3541 aatatctcaa gaaaaacccg gagcaaggca aactctggca acaaatgatg agcggcgaac
     3601 tgccggccga ttgggagaag catctgcct
//
LOCUS       DATDBY010000325         4331 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2881006, whole genome shotgun sequence.
ACCESSION   DATDBY010000325 DATDBY010000000
VERSION     DATDBY010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4331
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2881006"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..588)
                     /locus_tag="VIT19_06005"
     CDS             complement(100..588)
                     /locus_tag="VIT19_06005"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEY5838572.1"
                     /translation="MAVKRVMAKSVGPAGLERLELKRLTERIGWLFSLLQEAAAAQTP
                     TIAGTWAPTIDVCETTKAIEVRIELPGVTASQVRVGLNGNKLRICGDKKKRATRQRIT
                     SHLCSERAYGQFERIVPVRWPVDVKGATAELAKGVLVVRLPKLKDRRGSEIAIPIAEK
                     DS"
     gene            complement(596..1060)
                     /gene="nrdR"
                     /locus_tag="VIT19_06010"
     CDS             complement(596..1060)
                     /gene="nrdR"
                     /locus_tag="VIT19_06010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HEY5838573.1"
                     /translation="MKCPFCGFVEDKVVDSRESREGESIRRRRECLKCERRFTSYERI
                     EQIPYMVIKKDGRREAFDRNKVMAGVLRACEKRPIPPQKLDSIVNAVEKYVQESPERE
                     RPTSKIGEQIMRRLKELDKVAYVRFASVYLEFEDVSEFMEELKTLVRARAGR"
     gene            complement(1092..2168)
                     /locus_tag="VIT19_06015"
     CDS             complement(1092..2168)
                     /locus_tag="VIT19_06015"
                     /inference="COORDINATES: protein motif:HMM:TIGR00374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HEY5838574.1"
                     /translation="MAAKYRKFLEFVALLVLAIVIVWWFGRGLDWTQVKSALLASDWR
                     LILLGALGVLAGYLWRAVRWRAFLAPLTKASLREIWIAVCVGYAAVLTLGRAGEVVRP
                     LVLPMRDRRVRPAASFVTVMIERVYDSITVLLLFAVNLVLFTPASGAQEFARARLIGF
                     AFVGMLFVFVALLIVFRWRSRQIIEWFDKKIRPDSRVFGRLKHGIINLLQQLATALGV
                     LTSAKELATTIGWSLALWGSVAAGNLLVFRAFGLPFGVSETLFVLGWSMIGSVIPTPG
                     GAAGAFHAVTGGALILLGVAAEKAAAVAIVIHLVDFLPAALFGLFYFLRGDVTLARLR
                     LLMSATERAGDPENLPSAPGVRAA"
     gene            2410..2985
                     /locus_tag="VIT19_06020"
     CDS             2410..2985
                     /locus_tag="VIT19_06020"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5838575.1"
                     /translation="MATNEGAELVRRCRAGNGAAWEEIVQTYSRRVYNLAYRFTSRAD
                     TAEDLTQDVFVRVYRSLEQYNPKQGDLQNWLMRLARNLIIDDYRKRQRAPQDEIADDL
                     EDHKYHLRSAGNSVQREMERRELGAQVQAGIDKLSADLRTCVILRDIEELSYQEIVDL
                     LKIPEGTVKSRINRGRIELAKILRRMRVVEG"
     gene            3070..3936
                     /locus_tag="VIT19_06025"
     CDS             3070..3936
                     /locus_tag="VIT19_06025"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEY5838576.1"
                     /translation="MMLCNEFEERLTNYLDGALPVEEHRAFSEHALRCPLCHELLADV
                     KQTIVACLSSEAPPAGVGLEARILMTTAPQTAITCEEFEDHLTDYLDGVLMAPLYHRW
                     ERHAALCSACSELPGQVVRSIGAVYTYAQDELPVPAGLEARILQATIGNVLPRQVRAP
                     FASRMVEWLRGALDPLVSPQLASVATMLLVSVFVLTNTVSTDGSVRGLYRASLQLAER
                     TADNATRGSEKGVKQFAGSVNKLVGGEEKEKDGEKKHEANQNQNSPNQNSATPRPESS
                     EGKTGNSDSKNR"
     gene            3991..>4331
                     /locus_tag="VIT19_06030"
     CDS             3991..>4331
                     /locus_tag="VIT19_06030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838577.1"
                     /translation="MNCNYHPKNPAMGQCSNCSRPLCPACDHRIRGFAVCQDCIVAGV
                     DALRYRQSQPTNQQVIRRKTSPFIATFLSLFVPGLGAAYNGQTSKAIVHFAIFASFFQ
                     MAVVTDGVAFFA"
BASE COUNT         1017 a         1279 c         1178 g          857 t
ORIGIN      
        1 gcagttcttc tggaatctgc aactgctgat ctatcgcggg ttcggccgct accaaaacat
       61 ctacggcttc gttgtccagt tcagttgaca tgaatgtttc tatgaatcct tttccgcaat
      121 tggtattgct atttcagagc ccctgcgatc ctttagcttc ggcagtctaa ccaccaacac
      181 tcccttagct agttctgccg tggcgccttt cacgtcaacc ggccaccgca ccggcactat
      241 gcgctcgaat tgaccgtacg ctcgttccga acaaaggtgc gacgtgatgc gttgtcgcgt
      301 cgcgcgcttc tttttgtcgc cacaaatgcg cagtttattt ccattcaaac ccacccttac
      361 ttgcgaggca gtcacgcccg gtagttcgat gcgcacttca atcgctttcg tggtctcgca
      421 gacatcaatc gtcggcgccc aggtcccggc aatggtcggc gtctgcgcag ccgcggcttc
      481 ctgcaacaaa gagaacagcc agccgatgcg ctccgtcagc cgctttagct cgaggcgttc
      541 gagccccgcg ggcccgacac tcttagccat gactcgctta acagccatag ctcgtttacc
      601 ggcccgcgcg cgcgcgcacc agcgtcttca actcttccat gaattcagac acgtcttcaa
      661 attccaaata cactgaggca aatcgaacgt aagcaacttt gtcgagctct ttaagccgac
      721 gcatgatttg ctcgcctatc ttgcttgtcg gccgttcgcg ttcgggtgac tcctgcacgt
      781 atttttcgac cgcgttgacg atcgagtcca acttttgcgg cggaatcggt cgcttttcgc
      841 aggccctcag cacgcccgcc atcactttat tccgatcgaa agcttcgcgg cgaccgtcct
      901 tcttaatcac catgtacgga atctgctcga tgcgctcgta agacgtaaag cgacgttcac
      961 attttagaca ctcgcggcgc cggcgaatcg attcaccttc acgcgactcg cgcgagtcga
     1021 cgaccttatc ttcgacaaaa ccacagaagg gacatttcat aacgattgtt cctcactcat
     1081 tttgaatcaa ctcaagcggc tctgactcca ggcgcgctcg gcaggttttc aggatcacct
     1141 gcacgttcag tcgccgacat caatagacgc agtcgcgcca gagttacatc accccgcaaa
     1201 aagtagaaca acccaaacaa tgccgcgggc aagaaatcga cgaggtggat tacgatggcg
     1261 accgcagctg ccttttcagc cgcaacaccg agaaggatca gcgcgccgcc ggtgaccgcg
     1321 tggaacgcac cggccgcgcc acccggcgtg ggaatcaccg acccgatcat cgaccaaccg
     1381 agcacgaaaa gcgtctcaga aacgccgaac ggcaagccaa atgcgcggaa aaccagaaga
     1441 ttgcccgcgg caactgatcc ccacaacgcg agtgaccatc cgatcgtggt ggccagttct
     1501 ttcgcactcg taagcactcc caacgccgtc gccagttgct gaagaaggtt gatgatcccg
     1561 tgcttcaatc ggccgaaaac tcgcgaatca ggacgaatct ttttgtcgaa ccattcgatt
     1621 atctgtcgcg agcgccagcg aaagacaatt agcagcgcga cgaacacaaa cagcattccg
     1681 acgaacgcaa aaccgattag gcgtgcgcgc gcgaactctt gggcgccgga agcgggcgtg
     1741 aagagaacaa gattgaccgc gaataacagc agcaccgtga tcgagtcgta aacgcgctcg
     1801 atcatgacgg tgacgaatga agcagccggt ctgacacgcc gatctcgcat cggtaagacc
     1861 aaaggccgca cgacttcacc ggctcggcca agcgtaagta cggcggcgta tccgacacag
     1921 acggcaatcc agatttcgcg gagactggcc tttgtcaggg gtgcgagaaa ggcgcgccaa
     1981 cggaccgccc gccacaaata tccggcgagc acgccaagtg ctccaagaag gatcaggcgc
     2041 cagtccgacg cgagcagcgc actctttacc tgggtccaat cgagcccgcg gccgaaccac
     2101 cagacgatga caatcgccag cacgagcagc gcgacgaact caagaaactt gcgatatttt
     2161 gccgccattg accgaaacca acgatccgaa cgccctgagc gaaaaatgtg tgagccacaa
     2221 tatattgtgc cgcgtcgcca gcctacaaca gtttaatgtt atggttcaag aagcagcttc
     2281 gtgccaggct gagaccgggg gaactttgcg aagcaccgcc acgtaagaag ctcgtgtcgg
     2341 actccatgag tctcaatcgg ctgcgttaaa ctgaatcgga gaattcacca agtgggagcc
     2401 gccagaagct tggctaccaa cgaaggcgct gaactagtca gacgatgtcg cgcaggcaac
     2461 ggcgcggcct gggaagagat tgtccaaacc tactcacgcc gggtctataa cctcgcctac
     2521 cgattcacct cccgagccga caccgccgaa gacttgactc aagacgtttt cgtccgcgtc
     2581 taccgctcgc tcgagcaata caatccgaag caaggggact tgcagaactg gctgatgcgg
     2641 ctggcgcgga atctgatcat tgatgactat cgcaaacgtc aacgcgcgcc gcaggatgag
     2701 attgcggacg accttgagga tcacaaatat cacctgcgct ctgccgggaa ttcggttcaa
     2761 cgtgagatgg agcggcgcga actcggcgcg caggtacagg ccggaataga caagctttcg
     2821 gcggatttgc ggacgtgcgt catcctcagg gacatcgagg agttgagcta ccaggagatc
     2881 gtggatttgt tgaagatccc agagggcacc gtgaaatcac gaataaaccg cggccgaatc
     2941 gaactagcaa agatccttcg tcgtatgcga gtagtggagg ggtagtgtca gaagcccgac
     3001 ctgagggcgg gcacctgaac gcggtagacg ggaacaaagg gcataagaag ggttcggaat
     3061 ggaaacgaaa tgatgctgtg caatgaattt gaagaaagat tgacgaatta cctcgacggc
     3121 gcgttgccgg tcgaggagca ccgcgcgttt tccgaacacg cgttgcgctg cccgctgtgt
     3181 cacgaactgc tggccgatgt gaagcaaacg atcgtcgcgt gcctgtcttc cgaagctccg
     3241 ccggcaggtg tcgggctgga agcacgaatc ctgatgacaa cggctccgca aacggcgatc
     3301 acctgcgaag aattcgaaga ccatctgacg gattatctcg atggcgtttt gatggcgcct
     3361 ttgtatcacc gttgggaacg ccatgcggct ctgtgttcag cctgtagcga actcccggga
     3421 caggtagtgc ggtcgattgg cgcggtttac acctacgcgc aggatgaact gccggtgccc
     3481 gcaggcctcg aagctcgcat tctgcaagcg accatcggca acgtcttgcc tcggcaagtg
     3541 cgcgcgcctt tcgcgtcgcg gatggtcgaa tggctgcgtg gcgcgctcga tccgctcgtc
     3601 tcgccgcaac tcgcctcagt cgcaacaatg ctgctggtgt ccgtctttgt actgacgaac
     3661 acggtttcaa ccgatggttc ggtgcgcgga ctttatcgcg ccagcctgca attggctgaa
     3721 cgcacggcgg acaatgcgac gagaggatct gaaaaaggtg tcaagcagtt cgccggcagt
     3781 gtcaacaaac tagtcggtgg cgaagagaaa gagaaagacg gcgagaagaa gcatgaggcg
     3841 aaccagaatc agaatagccc aaatcaaaac agcgcgacgc cgcgcccgga aagctcggaa
     3901 gggaaaaccg gcaacagcga ctcgaaaaac cgctgaacgt tcgcgcgcga ttcaacgtac
     3961 atctgacacc gcgacagcgt gaagtaaccg atgaattgta attatcaccc gaagaatccc
     4021 gccatggggc agtgcagcaa ctgttcgcgg ccattgtgcc ctgcgtgcga ccatcgcatt
     4081 cgcgggttcg ctgtttgtca ggattgcatc gtcgccggcg ttgacgctct gcgttatcgc
     4141 caatcacaac cgacgaatca acaggtgatc cgtcgcaaga cttctccgtt catcgccacg
     4201 tttctttcgc ttttcgtccc cggcctgggt gcggcttaca acggtcaaac ctcaaaggcc
     4261 atcgttcatt tcgcaatatt cgccagcttt ttccagatgg ctgtagtgac cgacggcgtc
     4321 gctttctttg c
//
LOCUS       DATDBY010000326         4504 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_613878, whole genome shotgun sequence.
ACCESSION   DATDBY010000326 DATDBY010000000
VERSION     DATDBY010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4504
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_613878"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2514)
                     /gene="gyrA"
                     /locus_tag="VIT19_06035"
     CDS             complement(<1..2514)
                     /gene="gyrA"
                     /locus_tag="VIT19_06035"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF004043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEY5838578.1"
                     /translation="METIERHHITIEDEMRRSYLDYAMSVIIGRALPDVRDGMKPVHR
                     RVLWAMHELGNVYNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSMRYPLID
                     GQGNFGSVDGDAPAAMRYTEVRMAKLTNEVLADIEKETVNFQPNYDESLSEPTVLPTR
                     LPNLLLNGSEGIAVGMATKIPPHNLNEVVDATIAVLKDPEIDIEDLLKIVKGPDFPTS
                     GFICGREEIKESYRTGRGILQMRARASIDRIGRGSQERDAVIVTELPFQVNKARLIER
                     IAELANEKKLEGIAEVRDESDRHGMRIVVELKRDAVPQVVQNKLFKLTPMQSSFGVIY
                     LAIVNGQPRVLNLKAILEHFIDFRREVVRRRTEYELRKARARAHILEGLTKAIDALDY
                     IVTLIRNSRSVDEAKQWLIGNLKTTSEVKTWKGIPSNEPPAKYLPKLKKTMERLSFSE
                     IQAQAILDLQLRRLSGLERQKIIEEYESIIKLIAELEEILGNEKSLRRVIVNELEDVK
                     KEFGDARRTEITEAGTDYSIEDLIADEEVAITITKNGYIKRTPVTTYQRQGRGGKGRF
                     GAMAKNEDYVEHLFIASTHAYLMVFTDDGLVYKMKVHEVPDAAAASRGKAIVNLIQLQ
                     SDRKLAGVVPVREFSEGRFVLMVTRKGVIKKTALSDFQNIRSNGIIAINIDENDELLD
                     VVLTDGTKRIFIATNNGFAIRFDEKNARPMGRATRGTRGIDLRKDDVVVSLCAVSSDD
                     SEKMLSVSEQGYGKQTPISTYRLQSRGGKGVINMKTTDKTGKVVAVFPVDADSEIMII
                     TQQAKLIRLEAGAIRKTGRSAQGVRLIKTDEGDKVTSASL"
     gene            2777..3532
                     /locus_tag="VIT19_06040"
     CDS             2777..3532
                     /locus_tag="VIT19_06040"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEY5838579.1"
                     /translation="MAKEVTKFDQKSRRMRERIRVAMPARIYGRESGNREWTEMTRLV
                     DVTPFGARFRLMRPFDIGRLLQLTLAMPRSLRVFDHIEDQYRVWSIVRNARLLEQKKP
                     KDSLLEVGVAFIGKRPPKSYEENPARRYEIAQTKLESQLWAAQEDSVEQLAEITIDEK
                     RKESRQLIPVDVRIEVYEADKIVSTEQSVTENISRKGAAIFTALDLEPGTFVKMSNER
                     YNASVLGVVRQRRPGADGITRLHLEFIGSEWPL"
     gene            3614..3847
                     /locus_tag="VIT19_06045"
     CDS             3614..3847
                     /locus_tag="VIT19_06045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838580.1"
                     /translation="MPLNFPREVLLIEIERYCSFRDCAARNQIGLTKAEAIEYRGFDC
                     RKCQRWNDDTIGIDAVPDSWADAIPLNDSETAN"
     gene            3849..>4504
                     /locus_tag="VIT19_06050"
     CDS             3849..>4504
                     /locus_tag="VIT19_06050"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY5838581.1"
                     /translation="MGETTTTLERSRTANGVRPYPPTLPQWALDIVRRIALILSRVFW
                     RVRWRNKEYIPASGGVIIAANHQTYLDPFWIASQVKRPVRFLAWDAAFNWPVVGYFLR
                     LVGAWPLQLEGSDPAPIRRSIQWVSEGGAVVIFPEGGRGNEDGTMRKFKPGAVRMAME
                     AGVPILPVTVRGGEQVWPSSRRFPRLKRVEIIYHPLFVVDQNEGEVQRGQARRASEVL
                     "
BASE COUNT          912 a         1267 c         1289 g         1036 t
ORIGIN      
        1 cagcgacgcg cttgtcacct tatcgccttc gtcggtcttg atcagtcgca ctccctgtgc
       61 gctgcgcccg gtcttgcgaa tggcgcccgc ttccaggcga atgagtttcg cctgctgcgt
      121 gatgatcatg atttccgagt ccgcgtcgac cggaaacacg gcgacaacct tgccggtctt
      181 gtcggtcgtt ttcatgttga tgacgccttt gccgccacgc gactgcagac ggtaagtcga
      241 aatcggagtc tgcttgccgt aaccctgttc ggaaacagaa agcatcttct ccgaatcatc
      301 cgaagagacg gcgcacagcg aaacgacgac atcgtctttg cgcaggtcga tgccgcgggt
      361 gccacgagtg gcgcgtccca tcggccgcgc gttcttttcg tcgaagcgaa tcgcgaagcc
      421 gttgttcgtc gcgataaaga tgcgcttggt cccatcagtc agcaccacgt cgagcagttc
      481 atcgttttcg tcgatgttga tggcgatgat gccgttcgac cggatgttct gaaaatccga
      541 aagggccgtc tttttgatta cgcctttgcg cgtaaccatc aggacaaagc ggccttctga
      601 gaattcccgg acgggcacga cgccggcgag ttttcggtcc gattgaagct gaatcagatt
      661 cacgatcgcc ttgccgcgcg atgcggccgc cgcgtccgga acttcgtgga ccttcatttt
      721 gtaaaccagg ccgtcatcgg taaagaccat caggtaagcg tgcgtcgagg cgatgaacag
      781 atgctcgacg taatcttcgt tcttggccat cgccccgaag cggcctttgc cgccgcgacc
      841 ctgacgctga taagtcgtaa ccggcgtgcg cttgatgtag ccgttcttcg tgatcgtaat
      901 cgctacttct tcgtcggcaa tcagatcttc gatcgaatag tcggtcccgg cttcggtgat
      961 ttccgtgcgg cgcgcatcgc caaattcctt tttaacgtct tccagttcgt taacgatgac
     1021 ccggcgcagg gacttttcgt tgcccagaat ctcttcgagt tcggcgatca atttgatgat
     1081 cgattcgtac tcttcgatga tcttctggcg ttcgagcccc gacagccgcc gcagttgcaa
     1141 atccaaaatc gcctgcgcct ggatctctga gaacgagagg cgctccattg tcttcttaag
     1201 cttcgggaga tatttcgcgg gcggttcatt tgacgggatg cctttccacg tcttcacttc
     1261 gctggtcgtt ttcaggtttc cgatgagcca ctgcttggct tcatcaaccg aacgcgagtt
     1321 gcgaatcaac gtcacgatgt aatcgagggc gtcaatcgct ttggtcaaac cttccagtat
     1381 gtgggcgcgc gcgcgggctt tgcgcagctc gtattcggtg cgacggcgca ccacttcgcg
     1441 acgaaagtcg atgaagtgct ccaaaatcgc ttttagattg agcacccgcg gctggccgtt
     1501 aacgatggcc agatagatga cgccgaacga tgattgcatc ggcgtaagct tgaacagttt
     1561 gttttgcacg acctggggca ccgcgtcgcg cttcagctcg acaacgatgc gcatgccgtg
     1621 gcgatcggat tcgtcgcgca cttcggcaat gccttccaac tttttctcat ttgccagttc
     1681 ggcgatgcgc tcaatcagtc tggctttatt gacctggaat ggcagttcag tgacgatcac
     1741 tgcgtctcgc tcttgcgaac cgcgaccgat gcgatcgata gacgcccggg cgcgcatctg
     1801 aaggatgccg cggccggtgc ggtaagactc tttgatttct tcgcgcccac agataaagcc
     1861 gctcgtggga aagtccggac ccttgacgat cttgagcagg tcttcgatgt cgatttccgg
     1921 gtccttcagg actgcgatcg tggcgtccac gacctcgttg agattatgcg gcggaatttt
     1981 ggtggccatg ccgacggcga tgccttctga tccgttcagc aacagattgg gaagccgcgt
     2041 cggcagcacg gtgggctcgc ttaaactttc gtcatagttc ggctgaaaat taacggtctc
     2101 tttttcgatg tcggccaaaa cttcgttggt caacttggcc atgcgcactt ccgtgtaacg
     2161 catcgcggcc ggcgcgtcgc catcgaccga accaaagttt ccctggccgt cgattagcgg
     2221 ataccgcatc gagaaatcct gcgccatgcg cacgatcgtg tcgtaaaccg cggtgtcgcc
     2281 gtgcggatga tatttaccga tgacgtcacc aaccacacga gcgcttttct tgtatggctt
     2341 gttgtaaacg ttaccgagct cgtgcatggc ccacagcacg cgacgatgga cgggcttcat
     2401 gccgtcgcga acatcgggca gcgcgcggcc aatgatcacc gacatcgcat agtccagata
     2461 ggaccggcgc atttcgtctt cgatcgttat gtggtggcgt tcaatcgttt ccattcatca
     2521 gacctttccg ttaaaatccg cgggcgcggt gtgtaatcca gccgtcgcca ccgcaatagc
     2581 tctcgttttt tccggcacga acgtgtgagt ttgttgaaga cgtcaggggt tcgcggcagt
     2641 tgcccttcat gcagttaatt gcgacggtta ttttacccta agccgggggc ttttcaaagc
     2701 actgaaaggc cgataattat tgaagaattc gagtttcctc tcggctcgtt aaggggcgcg
     2761 aaaagcgctc agcgttttgg cgaaagaagt caccaaattc gatcaaaaat cgcgacgcat
     2821 gcgcgagcga attcgggtcg caatgccggc ccgtatctac ggacgcgaga gtggcaatcg
     2881 cgagtggact gagatgaccc gcctcgtaga cgtcactccg ttcggcgcgc ggttcaggct
     2941 gatgcggccc tttgatattg gcaggctttt gcaactaacg ttagcaatgc cgcggtcgtt
     3001 gcgcgtgttc gatcacatcg aggatcagta tcgcgtctgg tcaatcgtgc gaaacgcgcg
     3061 tctgctcgag cagaagaaac caaaagacag tttgctggaa gtcggagtgg ccttcattgg
     3121 taagcggccg ccgaagagtt acgaggagaa tccggcgcgg cggtacgaga ttgcccagac
     3181 taagctggag agccagttgt gggccgcgca agaggattcg gttgaacaac tcgccgaaat
     3241 cacaatcgac gagaagcgaa aggagagccg gcaacttatt ccggtcgatg tgcggatcga
     3301 ggtttatgaa gctgacaaaa tcgtcagcac cgaacagtcg gtcactgaga acattagtcg
     3361 caaaggtgcg gcgattttca cagccctcga tctcgaaccc gggactttcg taaagatgag
     3421 caacgaacga tacaacgcct ccgtactggg agtcgtgcga cagcggcgac caggggctga
     3481 tggcatcacg cggcttcacc ttgaatttat cggcagtgaa tggccgctgt gattctcgac
     3541 gtgcgccggc ctccggccaa gcttcatcct gtgcagaatt gcacgcggga cgcgtgcgta
     3601 ccagctaaaa cccatgccac ttaattttcc ccgcgaagtc ctgctcatcg aaatcgagcg
     3661 gtattgttct ttccgcgact gtgcggcgcg aaatcagatt ggtttgacga aggcggaagc
     3721 gattgagtac cgtggcttcg attgccgcaa atgccaacgc tggaatgatg acaccatcgg
     3781 cattgacgct gtccccgact cctgggccga cgcgattccg ctgaacgaca gcgaaaccgc
     3841 aaactaactt gggcgaaaca accaccacgc ttgaacgttc gcggacggcg aacggagtgc
     3901 gtccgtatcc gcccacgctg ccgcaatggg ctctggacat cgtgcgccga atcgccctga
     3961 ttctttcccg ggtgttttgg cgcgtccgct ggcgaaacaa ggaatacata cccgcaagtg
     4021 gcggagtgat catcgcggcc aatcaccaaa cctacctgga tcctttttgg attgcctctc
     4081 aagtcaaacg gccggtgcgt tttctcgcgt gggatgccgc tttcaactgg cccgtggtgg
     4141 gatatttcct gcgactcgtc ggcgcctggc ccttacagtt ggagggcagc gatcccgcgc
     4201 cgattcgccg atcgattcaa tgggtcagcg aaggcggcgc cgtcgtaatc tttcccgaag
     4261 gcggtcgcgg aaatgaggac ggcacaatgc gcaagttcaa acccggggca gtacgcatgg
     4321 cgatggaagc cggcgtgccg attctaccgg tgactgttcg cggcggagag caagtgtggc
     4381 cgtcaagccg ccgtttcccg cgactcaagc gcgtcgagat catttaccat cccttgtttg
     4441 tcgtcgatca gaatgaaggt gaagttcagc gcggccaagc ccggcgcgcg agcgaggttc
     4501 taca
//
LOCUS       DATDBY010000327         2902 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2664051, whole genome shotgun sequence.
ACCESSION   DATDBY010000327 DATDBY010000000
VERSION     DATDBY010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2902
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2664051"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VIT19_06055"
     CDS             <1..196
                     /locus_tag="VIT19_06055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838582.1"
                     /translation="AGRVQQFSARVSFAALFVALTGSFLDQIVAGAGWALASSSIIGW
                     SGALVVRKFLARRRGLDVSV"
     gene            complement(269..1288)
                     /locus_tag="VIT19_06060"
     CDS             complement(269..1288)
                     /locus_tag="VIT19_06060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838583.1"
                     /translation="MGREKTFPDALIRNINERGEGKVTAEYLVLGGIRHDDPPPYDLV
                     IDRISHEVPFYRATLKRLALEGTIIVNNPFWWSADDKFFNYSLAMKLGVAVPKTVLLP
                     QKDYIPGIVSESLRNLEFPLDWQAIIDYVGFPAFLKPFDGGGWKNVSKVNSIEELINE
                     YDQTGTLCMTLQAAVDFDQFVRCYCIGQEDVMIMPYDPSKPYLSGDQYVYDPNYLSPE
                     LNARVTHDVRTLCSALGYDINTVEFAIQGGIPYAIDFMNPAPDAELASVGEFYHNWVT
                     EAVTKLVFKRLSEPVERPQYRWDALLNPPPRKLDAVASASEQTGRTVKPKSEKKSTKA
                     RGAQK"
     gene            1579..2379
                     /locus_tag="VIT19_06065"
     CDS             1579..2379
                     /locus_tag="VIT19_06065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838584.1"
                     /translation="MKSRQAIISSVFAALALGAIFFAPATAMAQKEFTAEQIVESVIV
                     IAGTRPGLAQVRKTGLESGRLSRMTSEGRAEEVRYQRRFIAGDKIEKDKIRLDQKTAQ
                     TEFTLVKNGERIFGIINGSPFTPRAETTAEFLSQQTRSIEALLRYKENDSKLASAGKD
                     KQQGIDLYVIDLTDKANNKTRYFISVKSLRVLWLEYEEEALPATTPIKFMKRFYDYRY
                     AQSTLVPYRTVVYVDGKQATETRVMTITYGVKTDDSVFQHPDAASGGE"
BASE COUNT          631 a          821 c          813 g          637 t
ORIGIN      
        1 cgccggccgc gttcagcagt tttccgcgcg agtcagcttt gctgcgttgt tcgtggcgct
       61 gaccgggtca tttctcgatc agatcgtggc cggcgccggc tgggccctgg cgtcgtcatc
      121 gatcatcggc tggtcgggcg ctttggtagt gcgcaaattt ctggcgcgaa ggcggggact
      181 ggatgtgagc gtgtgactgg agcgcaagcg tcgtcgcttg ccgactgagc cccggattgc
      241 aaccgagacg gttgcgctcc agtcggtttt acttttgagc tccgcgagcc ttcgtagact
      301 tcttctcaga cttcggcttc accgtgcggc cggtttgttc cgacgctgac gccactgcat
      361 ccagttttcg cggcggcgga ttcagcaacg catcccaacg atactgcggc cgctcaaccg
      421 gctcgcttag ccgcttaaat accaacttcg tcactgcctc tgtcacccag ttgtgataga
      481 actcgccgac tgatgccagc tcagcatccg gggcgggatt catgaagtcg attgcgtagg
      541 gaatgccgcc ctggatcgcg aactccaccg tgttgatgtc gtagcccagc gccgagcaca
      601 gcgtccgcac gtcatgcgtc acgcgcgcat tgagttccgg cgaaaggtaa ttcggatcgt
      661 agacgtactg gtcgccggaa aggtaaggct tgctcggatc gtacggcatg atcatcacgt
      721 cttcctgtcc gatacagtag cagcgcacga actgatcgaa atcgacggcg gcttgcaggg
      781 tcatgcaaag cgttccggtc tggtcgtact cgttaatcag ttcctcgatc gagttcacct
      841 tcgaaacatt cttccagccg ccgccatcga aaggtttcag gaacgcggga aaaccgacgt
      901 aatcgataat ggcttgccag tcgagcggga attccaggtt gcgcagactc tcgctgacaa
      961 tgcccggaat gtaatccttc tgcggcagca aaaccgtctt cggaacagcc acgccaagct
     1021 tcatcgccag cgaataattg aagaacttgt cgtcggccga ccaccaaaac ggattgttga
     1081 cgatgattgt cccttcgagc gccaaacgct tcagcgtggc gcgatagaag ggcacctcgt
     1141 gcgagatgcg atcgattacg agatcatagg gtggcggatc gtcatgccgg atgcccccga
     1201 gcaccaggta ctcagccgtg accttgccct cgccgcgctc gttgatgtta cggatcaatg
     1261 cgtcgggaaa cgttttttcc cgtcccacta gaatgcctac acttttcatg agatttgcga
     1321 ctccaaaccg gtgccggcgc gcgcattctt cgctaaatca cgctgccgct cacgtcaaat
     1381 tttgattttt cggaagcgaa aacaacgtaa cttcaggcga ccttattgtc aaacccgaga
     1441 catccactac gtttgtcccg cgcatctatc cgtttggcta gcatccgtgt ccggtggttc
     1501 gctgtgttac aatccgcccc tttggaaagt caggcggcag taggcaggaa gcagtcggca
     1561 ggagtacacg cactacttat gaaatctcgt caggcaatca tttcgagcgt ctttgccgcg
     1621 ctggcactgg gcgcgatttt ttttgcgccc gcgaccgcga tggcgcagaa agagtttacg
     1681 gctgaacaaa tcgtcgaaag cgtcattgtc atcgccggca cgcggccggg tttggcgcag
     1741 gtccgcaaaa ccggcctgga gagtgggcgc ctgtcgcgga tgacgtcgga aggccgagct
     1801 gaagaggtcc ggtatcagcg ccggttcatc gccggcgaca agatcgagaa ggacaagatc
     1861 cggctcgatc agaagacggc tcagactgag ttcaccctgg tcaagaacgg cgagcgcatc
     1921 tttggcatca tcaatggatc gccatttact ccgcgcgcgg agaccacggc cgagttccta
     1981 tcgcagcaaa cacgcagcat cgaggcgctg ctgcgttaca aagaaaacga ttcgaagttg
     2041 gcgtccgccg gcaaagacaa acagcaggga atcgatctct acgtcattga cctcaccgat
     2101 aaagcgaaca ataagacgcg ttacttcatt agcgtcaaat cgctgcgggt gctctggctg
     2161 gaatacgaag aagaggcttt gcccgccacc acaccgatca aattcatgaa gcgtttctac
     2221 gattaccggt acgcgcagag caccctggtg ccttatcgca ccgtggtgta cgtggacggt
     2281 aagcaagcga cggaaacgcg cgtgatgacc atcacctacg gcgttaagac ggatgattct
     2341 gtcttccagc atccggatgc cgccagcgga ggcgagtagt cgctcttcca agacttcaca
     2401 aaaccatttt ccatttgaga tttgacgtct gacatttgtc atttgctctt cgcccgctag
     2461 tgaaggccat ggggtccagg caaagtaacc tgccgcccac actagtaggt ttcggatcca
     2521 aaatctcaga ttccaaatgc caaatggtat tggacgagct gtcgggcctt atcggtcggg
     2581 cctcgacgca aagccaatca aaatgacaaa tgatgaatgg aaaatggctt ttccccacct
     2641 ttttggaact ctaagtccgt cctagcgtgt caccagtgag cgtcgcaggc agcggtgtat
     2701 aatgtctgct cgcataaacc cgcaggaatc ctgaagattc ggcattgcgg gtggaagcac
     2761 tcgaagagcc tgcctgccaa tgagagcgtt aagttcagtt aagcattttg atttcgccgg
     2821 agcggcctca gcgccggcgt tggttgtgca gcccgctacc gatcacgctt tactggaagg
     2881 aacgctggcc ggcgacgaag at
//
LOCUS       DATDBY010000328         3063 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2886338, whole genome shotgun sequence.
ACCESSION   DATDBY010000328 DATDBY010000000
VERSION     DATDBY010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2886338"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..1142
                     /locus_tag="VIT19_06070"
     CDS             66..1142
                     /locus_tag="VIT19_06070"
                     /inference="COORDINATES: protein motif:HMM:NF024813.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEY5838585.1"
                     /translation="MGILDRLSPSAQFIEVIEWLDDSGNTMLYRFPVRDQEIKNGAQL
                     IVRESQTAVFVHEGQVADVFGPGRYTIDGGNTPILSKLGAWKYGFNSPMKSEVYFVST
                     KQFTDMKWGTSNPVMMRDSDFGMVRLRAFGIYSIRVGDPRELIKQVAGTNARFVTEDI
                     EGQLRRTLVSGFSDALGESKIAALDLASNYDELSVFSKQKLGDEFKSLGFELTKFVVE
                     NISLPQEVEAAMDKRTSMGVLGDMGKYTQFEAAQAMRDAAQNPSGGAGLGAGLGAGFA
                     VGNVMAGAMTDAMKQRGATVSEGAGATSAATDKCIKCGVAITADAKFCNECGASQSPA
                     KCAKCQNDLKPDAKFCDECGTKVE"
     gene            1394..2149
                     /locus_tag="VIT19_06075"
     CDS             1394..2149
                     /locus_tag="VIT19_06075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838586.1"
                     /translation="MERTKGLVRVRARLQLKLPVAVSCRESAEYQWIERSRLVDVNQF
                     GAGFTLTRPIEVGRLVRLSMPLPHQLRCYDQFETQPYSVWGLVRHIHVVSQEPRWFRI
                     GVAFIGKHAPASYEEDPTRRYEPLPRQTGQDSLWKLTRRPFVQKERREARLIIPLEVL
                     VETLDENGNPSLEEHTVTEAISSLGACIRTNLDVGVGRVLRISSVTEPVSIFAAIRSR
                     EVATDGITRLGLEFIADRWPLQREARFTYRNTS"
     gene            2243..>3063
                     /locus_tag="VIT19_06080"
     CDS             2243..>3063
                     /locus_tag="VIT19_06080"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-[acyl-carrier-protein] synthase
                     family protein"
                     /protein_id="HEY5838587.1"
                     /translation="MLNGFKTPRRVVITGMGCVTPIGNSRKAFWNSLQHGVSGVRRIE
                     SFDVSDSPVKIAAEVRDFDWQAQLNAKDRKHVPRTVPLALAAAREAFQDAGLETENFS
                     VEERQRIGVELGTGGGGLPFVEEHYAIWYNGGSHSKASIYIIPAATHGTLSSELSMAF
                     GLRGLSHVVSTGCTSSTDAIAYAAQHVALGRQDVMLAGGVDAPLAPGILAGFNLLTVL
                     TTEWNDDPAHASRPFTRNRSGMVLGEGAWMYVLETYESAKQRSAKIYAEIIGYGST"
BASE COUNT          646 a          852 c          925 g          640 t
ORIGIN      
        1 caaatttgaa cctgccgcgc gctttcgccg tataatgcta gccacgacat ttaaggagaa
       61 cactgatggg aattcttgac cgacttagtc cgagtgcaca gttcatcgaa gtcatcgagt
      121 ggcttgacga ctcaggcaac acgatgcttt accgatttcc ggtgcgtgat caggaaatta
      181 agaacggcgc gcagttgatc gtccgcgaat cgcagacggc agtctttgta cacgaaggtc
      241 aggtcgcgga tgtgttcggc ccgggccgct acacgatcga tggcggcaac actccgatcc
      301 tttcgaaact cggcgcctgg aagtatgggt tcaactcgcc gatgaaatcg gaagtttatt
      361 tcgtcagcac caagcagttc acggacatga agtggggcac gtcgaatccg gtgatgatgc
      421 gtgactcgga tttcggcatg gtgcgcctgc gcgcgttcgg catctattcg attcgcgtcg
      481 gcgatccgcg cgagctcatc aaacaagtcg ccggcacaaa cgctcgcttc gtcaccgaag
      541 acatcgaagg ccagttgcga cgtaccctgg tgagcggttt ttccgacgcg ctcggcgaat
      601 ccaaaatcgc ggcgcttgat ctcgcttcaa actatgacga gttgagcgtc ttctcgaaac
      661 agaaacttgg ggacgaattc aaatcgctcg gctttgagtt gacgaagttc gtcgtcgaaa
      721 acatttccct gcctcaggaa gtcgaggcgg cgatggacaa acgcacctcg atgggtgtgc
      781 tgggcgacat gggcaaatac acgcaattcg aagcggcgca ggcaatgcgc gacgcggcgc
      841 aaaacccgag tggtggcgcg ggattgggtg caggcctggg agcgggtttc gccgtcggca
      901 acgtcatggc cggtgcgatg actgacgcaa tgaaacagcg cggcgcaact gtttcggaag
      961 gcgccggcgc gacgtcggca gctacggaca agtgcatcaa gtgcggcgtt gcgataacag
     1021 ccgacgcgaa gttttgtaac gaatgtggcg cgtcgcaatc accggcaaaa tgtgccaaat
     1081 gccagaacga tttaaagcct gacgcaaagt tctgcgacga gtgcggaacc aaggtcgagt
     1141 agttgggtac gcacgcctct ggcgtgctgc acgcgggacg cgtgcgtacc gacttgatgt
     1201 gcggaaggcc tcaggccttc cggtaaactt cacaaggagg tttgggctac gccctaggat
     1261 cctgggcgca gcccaatttc tttttgaagc ggctgctcat tcaaattgac ttcaccatcg
     1321 tgaccatctc ttagctatac tcagatcccc cgctcacctt gtcccgcctc gccaccacaa
     1381 ggaggacatt catttggaac gaacaaaggg attagtgcgg gtgcgcgcgc gcctgcagct
     1441 taaactgccg gtcgccgttt cttgtcgaga gagcgctgag tatcaatgga ttgagagatc
     1501 ccgcctggtc gatgtgaatc agttcggcgc cggtttcact ctgacgcggc cgattgaagt
     1561 cggccggttg gtgcgtcttt ccatgccgct tcctcatcaa cttcgttgct acgatcagtt
     1621 tgagacgcag ccgtattcag tttggggatt ggtgcgacac attcatgtcg ttagccagga
     1681 gccgcgctgg ttccggatcg gcgtcgcgtt catcggcaag catgctccgg ccagctatga
     1741 agaagatccg acgcgcagat atgaaccgct tccgcggcag acgggacagg attctctttg
     1801 gaagttgacg cgacgcccat tcgtgcaaaa ggaacgcaga gaagcgcgac tgatcattcc
     1861 gctggaagtg ctcgttgaga cgctggacga aaacggtaac ccttcattgg aggagcacac
     1921 cgttaccgaa gcgatcagca gtttaggagc atgtattcgc accaatcttg acgtcggcgt
     1981 cggtcgcgtc ctccgcatca gcagcgtcac ggagccagtc tcgatctttg ccgcgattcg
     2041 ctcgcgtgaa gtcgcaaccg acggcatcac gcggttgggt ctcgagttca tcgctgatcg
     2101 ttggccgctt caacgcgagg cgcgcttcac ctatcgaaac acttcttgag cattccccag
     2161 cggacagggc gtatccgacc ggccagtcat tggcggcctg agccacgggg tgtatccttg
     2221 gccgtccctg acccgctagc caatgctcaa cggcttcaaa actccgcgcc gagttgtcat
     2281 taccggcatg gggtgtgtca cgcctatcgg caatagccga aaagccttct ggaactcact
     2341 acaacacggc gtcagcggcg tgcggcgcat cgagtcgttc gatgtttctg attcgccggt
     2401 gaagattgcg gccgaagtcc gcgattttga ttggcaggca cagctcaacg cgaaggatcg
     2461 caagcacgtt ccgcgcacag tgccgctcgc tttagcggcc gcgcgcgagg cttttcagga
     2521 tgcgggcctt gagaccgaga acttttcggt tgaagaacgt caacggatcg gagtggaact
     2581 ggggacgggc ggaggcgggt tgccgttcgt cgaagagcat tacgccattt ggtacaacgg
     2641 tggctcgcac tcaaaggcca gcatctacat cattcccgcg gccacacatg ggacactgtc
     2701 gagcgaactc tcgatggcgt tcggcctgcg cggtttgtcg catgtcgtct cgacgggctg
     2761 caccagctcg accgatgcaa ttgcttacgc cgcgcaacac gtcgcgctgg gacgacagga
     2821 cgtgatgctg gcaggtggcg ttgacgcgcc cctggcgccg ggaattctgg ccggtttcaa
     2881 cctgctgacc gtgctgacaa ccgagtggaa cgatgatccc gcacacgcgt cgcgtccgtt
     2941 tacgcgtaat cgatcgggaa tggttttggg cgaaggcgcc tggatgtacg tgctggaaac
     3001 gtacgagagc gcgaaacagc gcagcgcgaa aatctatgcc gagatcatcg gttatggatc
     3061 gac
//
LOCUS       DATDBY010000329         2590 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1038784, whole genome shotgun sequence.
ACCESSION   DATDBY010000329 DATDBY010000000
VERSION     DATDBY010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1038784"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="VIT19_06085"
     CDS             complement(<1..210)
                     /locus_tag="VIT19_06085"
                     /inference="COORDINATES: protein motif:HMM:NF025048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838588.1"
                     /translation="MSAAIKPTKIDSTPPNSRRIYVEGQQGGVRVPFREIDQNPTRNF
                     KNELEENPPVRVYDTSGPYGDPSQAT"
     regulatory      complement(367..567)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            779..2569
                     /locus_tag="VIT19_06090"
     CDS             779..2569
                     /locus_tag="VIT19_06090"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY5838589.1"
                     /translation="MNTPCPPLLTREPSTSAKAPSPLRSAGALQSIIPLLSKNLLRRN
                     NLMLHRRAVAVALISILLCLPTFGQSQSDKELLERIRKEAMTNSQIMKTMHMFSDVYG
                     PRLTGSPNHKRSAEWALKQMTAWGLSNGHLHAWDFKHPGWLNERLTAHIVAPVKDSLV
                     AEVLAWTPGTRGVVRANAYQIILPARPTQQQLTSFFDAEKTKVRGRVVMIGRPAVVPV
                     NVNPPPKRMTDEQAEQRYGPNARPQQFGGPSPSPTPTPGPGTPTPLTNRQIDEQLDVF
                     LKANGALVRVNDAGREHGQIRAFNNRTFDVSKAVTTVVMRNEDYGRITRLLADGRPVT
                     LEFNIVNRLYPEGKTSYNTIAEIPGTDKADEVIMLGGHLDSWHAATGATDNAIGCAIM
                     MEAARILKTLGVRPRRTIRVALWSGEEQGLLGSQAYVKDTFGSFESPKPGYEKFGGYF
                     NIDSGTGRIRGASVFGPSEGASIVREILKPFKDVGVVGAIATRSRGLGGSDNTSFNQA
                     GLPGIGMGIDPIEYNSHTWHTNLDTYERIIEDDVKKNAATIAWAVYQLAMRDELLPRF
                     KPEDMPRPPRATETPEPTPSPRPTPPRRRG"
BASE COUNT          591 a          722 c          738 g          539 t
ORIGIN      
        1 cgtcgcctga gatggatcgc cgtaaggacc gctggtgtca tagacacgca ccggcggatt
       61 ctcttccaac tcatttttga aattacgagt tgggttttga tcgatctcgc gaaagggcac
      121 gcgcacgccg ccctgttggc cttcgacgta gatgcggcgt gaattgggag gtgtgctgtc
      181 gattttagtt ggtttaattg cggcgctcat ttgtactcct ttggagtgcg ctgacttgtc
      241 agcgctatgt gtttatttgg tgaaagcggc gacaggtcgc cgcactccaa aaactaaaaa
      301 accgctccat cgaaaaggga cggaacggtc atcttgcact cagcgggttg gccctttggg
      361 gctttccgcg tgatggctgt ttctcccttc gacggtgcta gccgtatcag gttcaagggg
      421 tctcccacta gaatctcgaa tttcgaaatg cgaatttcga attgaactgt aaaagccctt
      481 tcaattcgca atccgcaatc caaaaagcgg caattcctct cggactctca gcctcagtca
      541 acgacctcgg ctcccccgaa acgtatttgg ttgtcaacgc gatcgcattc tagaactaag
      601 gagtcgtgtg tgcaaccaaa ccgatttctt tcacacctcg cttcagtgag gtggttaacg
      661 aattcaaaat gaagcgttag ccgtttcaac ggctttcggg aaaccgttgg aaacggttaa
      721 agaagatcaa aagctgctgt tcacctcgct gaagcgaggt gtaatgagaa ggtgcaaaat
      781 gaacacgccc tgcccgccct tgcttacgcg cgaaccttcg acgtcagcca aagcgccgtc
      841 gccgcttcgc tctgccggcg cactccaaag tataattccg ctgctctcca aaaacctgct
      901 caggagaaac aatttgatgc tgcatcgccg cgctgttgct gtcgccctga tttcaattct
      961 gctttgcctg ccgactttcg gccaatcgca atcagacaaa gaactgctgg aacggattcg
     1021 caaagaagcg atgacgaatt cgcagattat gaagacgatg cacatgttct ccgacgtgta
     1081 tggtccgcgg ctcaccggct cgccgaatca caaacgctcg gcagagtggg cgctgaagca
     1141 gatgacggcg tggggacttt cgaacgggca tctgcacgcg tgggatttca aacatccggg
     1201 atggctgaac gaaagattaa ctgctcacat cgtcgcgcca gttaaagatt cattggttgc
     1261 cgaggtgttg gcgtggactc caggcacgcg cggcgtcgta cgcgcgaatg cttatcaaat
     1321 tatcctgccg gcgcggccga cgcagcagca gttgacgtct ttcttcgacg ccgagaaaac
     1381 gaaagtgcgg ggacgcgtcg tgatgatcgg aaggcctgcg gttgtgccgg tgaatgtgaa
     1441 tccgccgccg aaaaggatga cagacgagca agcggaacag cgctatggcc cgaatgccag
     1501 gccgcagcag tttggcgggc cgtcgccgtc acctacgccg acgccagggc ccggaacgcc
     1561 gacgccgctg acgaaccgac aaattgacga gcagctcgat gtgttcctga aagccaatgg
     1621 cgcgctggtt cgggtgaacg atgccggccg cgagcacgga cagattcgcg ctttcaataa
     1681 tcgaaccttt gacgttagca aggcggtgac gaccgtcgta atgcgaaacg aagactacgg
     1741 ccgcatcacg cgccttctcg ccgatggaag gccggttact ttggagttca acatcgtcaa
     1801 ccgcctgtac cccgagggca agacttccta caacacgatt gctgagatcc ccggtaccga
     1861 caaagctgac gaagtaatca tgctcggcgg ccatttggat tcgtggcatg cggccaccgg
     1921 cgccaccgac aacgcgatcg gctgcgccat catgatggaa gcggcacgca ttctgaagac
     1981 cttgggcgta cgcccacgtc gaacgatccg cgtggcgttg tggagcggcg aggagcaggg
     2041 actgctcgga tcgcaggctt acgtgaaaga caccttcgga tcctttgaga gtcccaagcc
     2101 cggttacgaa aagttcggcg ggtatttcaa catcgatagc ggcacgggtc gcattcgcgg
     2161 cgcgagtgtg ttcgggccgt cagaaggtgc aagtatcgtg cgcgaaattc taaagccctt
     2221 caaagatgtc ggtgtcgtcg gcgcaatagc gacgcgcagt cgcggcctgg gcggatctga
     2281 caacacttcg ttcaatcagg cgggtttgcc gggcatcggc atgggaatcg atccgatcga
     2341 gtacaactcg cacacctggc atacgaatct cgacacctac gaacgaatca ttgaagacga
     2401 cgtgaagaaa aacgccgcga ccatcgcgtg ggccgtttat caacttgcga tgcgcgacga
     2461 gctgttgccg cggttcaagc cagaagatat gccacgaccg ccgcgcgcga ccgagactcc
     2521 tgagccgact ccatcgccgc ggccaacacc accacgccgg cgtggataag atttctcccg
     2581 aaggagtttc
//
LOCUS       DATDBY010000330         2240 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_680365, whole genome shotgun sequence.
ACCESSION   DATDBY010000330 DATDBY010000000
VERSION     DATDBY010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_680365"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..476
                     /locus_tag="VIT19_06095"
     CDS             <1..476
                     /locus_tag="VIT19_06095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838590.1"
                     /translation="VLASDRSYMLNNRDEKVEVALSELNTGAFPMSNGLTRLQSRFLA
                     EPKKAYEAFAREGTFDTEAADEAGLVTFAPDDLDWEDEIRLAIEERTSLSPDALTGME
                     ASLRFAGPETMDTKIYGRLTAWQNWIFQRPNAVGEHGALTNYGKPTQAKFDYKRT"
     gene            502..1035
                     /locus_tag="VIT19_06100"
     CDS             502..1035
                     /locus_tag="VIT19_06100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838591.1"
                     /translation="MNKSYRSRNVMMLALVALMLCPTLFAQAQQRGTVAFASPDGFLP
                     AELSKHVGAMFLSPKTPAGLFVGYPSDGQDMDGFRNEMQQRVVKMFLHDAKDVTWTAT
                     PLPPHKGISEAGNLFYASTEKMEVQLAFYVRSEGVAYGYYAMRHKNDGGKDGKFLKSD
                     GTGVKALDSLAKTIVIK"
     gene            1042..>2240
                     /gene="boxB"
                     /locus_tag="VIT19_06105"
     CDS             1042..>2240
                     /gene="boxB"
                     /locus_tag="VIT19_06105"
                     /EC_number="1.14.13.208"
                     /inference="COORDINATES: protein motif:HMM:TIGR03225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA];
                     GO_process: GO:0010128 - benzoate catabolic process via
                     CoA ligation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA 2,3-epoxidase subunit BoxB"
                     /protein_id="HEY5838592.1"
                     /translation="MNLNERIPNNVNLSEDKRLQRALEKWLPNFLDWWQDMGPEGFQQ
                     KDVWLRTAIDVGSEGWAHFDYVKMPEYRWGIFLEPAQPDAKVGFGDNYGQPVYQEVPG
                     EFRNSLRRIIVTQGDTEPASVEQQRRLGSSCPSLYDLRNLFQVNVEEGRHLWAMVYLL
                     HGYFGRDGRDEADALLERRSGNPDKPRILEAFNQPCDDWLNFYAFTMFTDRDGKYQLS
                     ALAESGFEPLARTCKFMLTEEAHHMFVGDTGLSRVVRRTAQLMKQNPNEEVRDLGGIP
                     LEIIQKYINFWFSYSLDLFGGEISSNSADFFAAGLKGRFKEQEQYTDHIAAEGAFTMS
                     VVESSNLVPREVPLRNALNEVLRGEYVKDCEKGLARWNKALTDEGLSQRLYLPNIRFH
                     RHVGEYAG"
BASE COUNT          508 a          585 c          660 g          487 t
ORIGIN      
        1 tggtgctcgc atccgatcgc agctacatgc tgaacaacag ggacgaaaag gttgaagtcg
       61 ccctgagtga attgaatacc ggcgcgtttc cgatgagcaa tggactgacg cgtttacaat
      121 cgcgcttcct ggccgaaccc aagaaggctt atgaggcgtt tgcgcgcgaa ggcacgttcg
      181 acactgaagc cgcggacgaa gccgggctcg tcactttcgc gcctgatgat ctggattggg
      241 aagacgaaat ccgtttggcg attgaagagc gcacttcgct ttcgccggac gctttgaccg
      301 gcatggaagc gtcgttgcgc ttcgccggac cggaaactat ggacacaaag atctatggcc
      361 gtctgacggc gtggcaaaac tggatctttc agaggccgaa tgccgtcggc gaacatggcg
      421 cgctcacaaa ttatgggaag ccgacgcagg cgaagtttga ttacaagcgg acttgattca
      481 ccgatacata gggaaggctc cttgaacaaa tcctaccgct cacgcaacgt tatgatgctc
      541 gcgctggtgg cgctgatgtt atgtccaact ctgtttgcgc aagcccagca gaggggaacc
      601 gtcgcgttcg catctcccga tgggttcctt cccgctgagt tgtcgaaaca cgttggtgcg
      661 atgttcctaa gtcccaaaac tcctgccggg ctcttcgttg ggtatccttc ggacggtcag
      721 gacatggatg gtttccgcaa tgaaatgcag caaagagtcg tcaagatgtt cttgcacgac
      781 gcaaaggatg ttacctggac agcaacaccc cttccgcctc acaaggggat tagtgaggct
      841 ggcaacctgt tctacgcctc aaccgaaaaa atggaagtcc aactagcttt ctacgtacgt
      901 tccgaagggg tcgcctacgg ttattacgcc atgcgtcaca agaacgatgg cggcaaagac
      961 ggaaagttcc tgaagtctga cggtactggc gtaaaagcgt tggattcgct ggcgaagaca
     1021 attgtcatta agtaatcaat catgaatctt aacgaacgca ttcctaacaa cgtaaatctt
     1081 tccgaggaca aacgtcttca gcgtgcactt gagaagtggc tgccgaactt tctcgattgg
     1141 tggcaggaca tggggccgga agggttccag cagaaggatg tctggttgcg cacagcgatc
     1201 gatgttggca gcgaaggctg ggcccacttc gattacgtga agatgccgga gtaccgctgg
     1261 ggcatttttc tcgagcccgc gcagcccgac gcgaaggttg gcttcggcga caactatggc
     1321 cagcctgttt atcaggaagt gccgggtgag tttcgcaatt ccttgcgccg catcatcgtg
     1381 acccagggcg acactgaacc ggcttcagtc gaacagcaac gccggctggg tagcagttgt
     1441 ccgtcgcttt acgacttgcg gaatctgttt caggtgaacg ttgaagaagg ccggcatctt
     1501 tgggcaatgg tctacttgct gcacgggtac ttcggtcgcg atggccgcga tgaagccgat
     1561 gcactgctgg agcggcgcag cggcaatccc gataagccgc gcatcctcga agctttcaac
     1621 cagccttgcg acgactggct gaacttctac gcgttcacga tgttcacaga tcgagacggc
     1681 aagtatcagt tgtcggcgct ggctgaatct ggtttcgagc cgctcgcgcg cacgtgcaag
     1741 ttcatgctga ccgaagaagc acatcacatg ttcgtcggcg atacgggcct gagccgggtt
     1801 gtcagacgca cggcccaatt gatgaagcag aatccgaacg aagaggtgcg cgatctgggc
     1861 ggcattcccc tcgaaattat tcagaagtac atcaacttct ggtttagcta ttcgctcgat
     1921 ctgtttggcg gcgaaatcag ttcgaactca gcggatttct tcgcggccgg tttgaagggc
     1981 cgtttcaaag agcaggagca gtacaccgat cacattgcgg cagagggcgc ctttacgatg
     2041 tcggtggtcg aaagcagcaa ccttgtgccg cgcgaagtgc ctttgcgaaa cgctctgaac
     2101 gaagtcctgc gcggcgaata cgtgaaggat tgcgagaagg gtttggcgcg ctggaacaag
     2161 gcgcttacgg atgaaggtct cagccagcgt ctgtacttgc cgaacatccg tttccaccgg
     2221 cacgtcggcg agtacgcggg
//
LOCUS       DATDBY010000331        10457 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1236757, whole genome shotgun sequence.
ACCESSION   DATDBY010000331 DATDBY010000000
VERSION     DATDBY010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 10457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10457
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1236757"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..984
                     /gene="cax"
                     /locus_tag="VIT19_06110"
     CDS             <1..984
                     /gene="cax"
                     /locus_tag="VIT19_06110"
                     /inference="COORDINATES: protein motif:HMM:TIGR00378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015368 - calcium:monoatomic cation
                     antiporter activity [Evidence IEA];
                     GO_process: GO:0006816 - calcium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/proton exchanger"
                     /protein_id="HEY5838593.1"
                     /translation="AMAIIPIATQIVGATEQLATRTGDAVGGLLNATFGNAPEMIIAL
                     VALKAGYMDMVRASLVGAILANLLLAMGIAFLTGGLRFHEQKFNPAAARTYGTMMFLA
                     AVSMSVPSAFSRVLAPNEVIRQERLLNVGIAVLLLVAYALYILYTLKTHKTAFASVES
                     EGHGDHHEEQWSVARAVITLLAASVFAAFMSEILVGAAEETGKALGMSQVFIGIVFVA
                     VVGGAAESGSAIAMGRKNKMDLSVGIALGSSIQIALFVAPLLVLASYFIAPQPLELAF
                     SRAEIGSLFIAVFIGVLVCGDGQSNWFKGVQLITVYSIIALMFYLIPEITR"
     gene            1181..3331
                     /locus_tag="VIT19_06115"
     CDS             1181..3331
                     /locus_tag="VIT19_06115"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5838594.1"
                     /translation="MVRDWANRLTANDPKIRATAEAALVKRSARALPLLRRFLNTDNE
                     DLHLETFEIIQRIGPAAIPLIIELLRDKRTSLRRSAVNELIDLAPDTESIQPALRRAL
                     KDEDSMVAADAARALGALGKRASPSVSALINALSHDEPHVRIYAAEALASIGPKADAA
                     TKHLARALRDPIPGVRWAAAEALAGIGPDAQSAVPQLIEALQDEFLYVRICAAEALGS
                     IGPKALTAVEALRAAANDPALRIQAEWALNRIAGIESGKPVGLTNAPAPSVLLQLPTT
                     AAQTGNPPIDWDTTTGRNIVWSVELGNEVYGSPVVAGGVVYVGADNTRQLNPAFQEDA
                     GVLRAFRVTDGAFLWQDVAPRVERGLREWLLPSTTSAPYVEGDRLYYVTAECQLRCLD
                     TRGFGDGENNGPYREEVFKDKAAADIVWQLDMPALGVFPHEACNSDVLSLGDLLLVGT
                     SNGQNEGHTRVPSPRAPSLIAVNKLSGEVVWRAIGPGDRVLHGNWSSPVGARVNGHMQ
                     VLYGGGDGWLRAYDAASGREVWQFDGNPKGARWLPRPGVLSRDFIIASPVVADGRVFV
                     AMGQSPGHGNAPSLVHAVSLNGQGDVTKSGLLWTSREVSRVVGTPIVNNGLLYVGDVG
                     GTVHCLDAVTGAQLWKHETHEAIWGCFLLAGDRLYVGNEGGFMTVLRAGRTKELLAQI
                     EMDAPLYARPAVVGDALYLATASRLYLIAARPRS"
     gene            complement(3522..4904)
                     /locus_tag="VIT19_06120"
     CDS             complement(3522..4904)
                     /locus_tag="VIT19_06120"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HEY5838595.1"
                     /translation="MNTEHLDSPAFYRAILKSEGHRIIGLFAVLAALAFYTILRGLRV
                     EGFHLLWVQTAALVMISAHEFLVLRAIRRALRGGKDVPPATWFVNVILESQIPTIALF
                     LLLLSQWMTPYQVLVAPAMLVYFLFIILSILRLSPGMTLVSGTMSALSYLFVVFYVEA
                     KFHGSRVEAGGFPVQLYIVYAGLIFLAGILAAAVAAKVRSYVATALHEAELQHELAQV
                     THDLEIAKSIQQGLLPSQTLKLDYFEIAGWNQPADQTGGDYFDWQLLPDGRVAVSLAD
                     ATGHGIGPALVSTSCRAYSRASLLAGADKNGLLDRLNSLLAADLSANRFVTFAVLFLD
                     PADSSVKVLSAGHGPMLVYRHSTNQIESLEAHGIPLGMIAGVPYSNATNISLESGDLM
                     AVITDGFYEWENRDGEQFGLQRLEDTIRDSRDCTAEEVIGRLRSSVEKFCGGTEQQDD
                     LTAVVLRRKT"
     gene            complement(5103..5519)
                     /gene="atpC"
                     /locus_tag="VIT19_06125"
     CDS             complement(5103..5519)
                     /gene="atpC"
                     /locus_tag="VIT19_06125"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="HEY5838596.1"
                     /translation="MPDTLQLRIITPQGVAYQDEVQLVALRAPDGQISILPHHTRLMT
                     QMLPGELMVRKDSRDQFLAVGEGLVEISGKGVAIATDMAIPAEDIDEAKIEEARRRAE
                     ARLRDKISDEEVASVNASLARSLAQLHVKRRRRART"
     gene            complement(5552..6955)
                     /gene="atpD"
                     /locus_tag="VIT19_06130"
     CDS             complement(5552..6955)
                     /gene="atpD"
                     /locus_tag="VIT19_06130"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020045332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEY5838597.1"
                     /translation="MSTGKIVQVSGPVVDVEFKDGMPAIYNALSVEFRVSGEPVKLTL
                     EVQQHLGDKWVRTISMSGTEGLKRGFEVEDTGGPIKMPVGDGVMGRVFDVTGNAVDER
                     GPVAAEKYYPIHRPAPPLIDQSTSPELLSTGIKVIDLICPFMKGGKVGAFGGAGVGKT
                     VVIMELINNIAKLHGGVSVFAGVGERTREGNDLYNEMSEAGVINQQDLKSSKIALVYG
                     QMNEPPGARLRVALSGLAITEYFRDEKNQDVLLFIDNIFRFSQAGAEVSSLLGRTASA
                     VGYQPTLAAEMGALQERITSTKKGSITSFQAVYVPADDLTDPAPATTFAHLDATIVLE
                     RAIAELGIYPAVDPLASTSRALEPEIVGQTHYDVARRVQAVLQRYKDLQDIIAILGLD
                     ELSPDDKLTVLRARKIQKFLSQPFSVAQVFTGRQGKQVPIAETVRGFKEILDGKHDSV
                     AEADFYMKGGIEEIEQV"
     gene            complement(6982..7845)
                     /gene="atpG"
                     /locus_tag="VIT19_06135"
     CDS             complement(6982..7845)
                     /gene="atpG"
                     /locus_tag="VIT19_06135"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HEY5838598.1"
                     /translation="MHSPRDLRRRISSITSTAQITKAMQMVAASKMRKAQEAALAGRP
                     FVQLLYRFQREATTLLPEFKHPFLEVRPVRKRAIILVAADKGLCGALNSNLFRLAQHF
                     DPGITVFITAGRKAAQWVAGTRRQLIAEFAYGDSPTFPEARAIAGFARELFMKKEVDE
                     VRILATRFVNTLTQHPVSLEYLPVGEIKGLKIPGTGADPEPAREEECLFEPGAAEFLS
                     YMFSHYLNIYVYQVLLNAKASEQSARMVSMKNATENAESLMEDLTLEYNKLRQGNITN
                     ELLEIAGGQAA"
     gene            complement(7847..9379)
                     /gene="atpA"
                     /locus_tag="VIT19_06140"
     CDS             complement(7847..9379)
                     /gene="atpA"
                     /locus_tag="VIT19_06140"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF009884.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEY5838599.1"
                     /translation="MPDLLMEIEAQLIGAKAVAVRQNTGVIREIGDGVARIEGLSDAM
                     LNEMIDLGHGLTGLALNLDETEVGVVILGDYTRLEEGDEVRTTGNLLRVPVGKSLLGR
                     VVNTLGEPLDGKGPINSDTSYPVERIAPGIIRRSSVRQPLQTGIMAIDAMIPIGRGQR
                     ELIIGDRSTGKTTIGVDTIINQARLNSAGEASNDKEFRPMYCIYVAIGQKQSSIARII
                     QVLEEAGALPYTIIVASPASDSATNQYLAPFAGAAMGEWFMDHGMDALIIYDDLSKHA
                     VAYRQVCLVLKRPSGREAYPGDVFYLHSRLLERAARVGEKYGGGSLTALPIVETQAGD
                     VSAYIPTNVISITDGQIYLETDLFYQGVRPAISVGLSVSRVGSAAQLKAMKQVAGQLK
                     GDLAQFRELAAFAQFGSELDPKTQAQIDRGKRIVEVFKQPRHSPVPVELQVALVWSMQ
                     NGYFDDVELNRIKEFQEKLTEFLTVRKSSLLEKVAHQKVITDEVTAELKAAADSFKQG
                     WK"
     gene            complement(9419..9811)
                     /locus_tag="VIT19_06145"
     CDS             complement(9419..9811)
                     /locus_tag="VIT19_06145"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEY5838600.1"
                     /translation="MRTPKQTKRAARQMFRRCFVDGSLDEARVRRTVNEILAGKKRGY
                     LALANQFERLVRLEQFAHSADVQSAVPLSAHLRAHVKTNLARLYGGDIAMSFSERPAL
                     IGGMRIRAGNDVYDGSVKAGLAALQESF"
     gene            complement(9808..10356)
                     /locus_tag="VIT19_06150"
     CDS             complement(9808..10356)
                     /locus_tag="VIT19_06150"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit B"
                     /protein_id="HEY5838601.1"
                     /translation="MNALLMVVNGGSGGQIQEIASTFGVDWRHLISQIISFGIVCTLL
                     YLFAYRPVLRMLAHRRDLIAQGLANSEQIKVELAKTETMREQVLDQANLEASQLIAEA
                     REAATRLREQETKKATAAAQQIIITAHEVAASQHTRMMAQLKREVGQLVVKTAAAITG
                     RILTAEDQTRLNEATAKELTAR"
BASE COUNT         2196 a         3037 c         2897 g         2327 t
ORIGIN      
        1 gcgatggcca tcattccgat cgccactcag atcgtcggcg ccactgaaca acttgcgacc
       61 cggaccggcg atgccgtcgg cggtttgtta aatgccactt ttggtaatgc gcctgaaatg
      121 attatcgcgt tggttgcttt aaaggcaggt tatatggaca tggtgagggc gtcgctggtc
      181 ggggctattc tcgccaacct gctgttggcg atgggtattg cgtttctcac cggcggcctg
      241 cgctttcacg aacagaaatt caatccggcc gccgcgcgaa catacggcac gatgatgttt
      301 ctcgctgcgg tgagcatgtc agttccgagc gcatttagcc gggtactcgc tccaaacgaa
      361 gtaatccgac aggagcgact cctgaacgtc ggcatcgccg ttctgttgtt ggtggcgtac
      421 gcactctaca tcctctacac actaaaaacg cacaagaccg catttgccag tgtcgagagc
      481 gagggccacg gcgatcacca tgaagaacag tggagtgtgg ctcgcgccgt gattaccttg
      541 ctcgcggcat ccgtgttcgc cgctttcatg agcgagatac tggttggcgc tgccgaagaa
      601 acgggaaaag cgctgggcat gtcacaggtg ttcattggca ttgttttcgt cgcggttgtt
      661 gggggcgccg ctgaaagtgg atcagcaatc gccatgggcc gaaagaacaa aatggatctg
      721 tcggttggga tcgccctggg aagctcgatc caaattgctc tgtttgtggc gccgttgctg
      781 gtgctcgcca gttactttat cgcgccgcaa ccattggaac tcgccttcag ccgggccgaa
      841 attggttcgt tgttcatcgc cgtcttcatc ggcgtgctgg tatgcggtga tggtcaatcg
      901 aattggttca aaggcgtgca gttaattacc gtctattcaa tcatcgcgtt gatgttctat
      961 ctgataccag aaatcactcg ctgactcagc tgcgatcgag cgagtctggc cgttcaatgc
     1021 ggtcgaacga aattaatgtt aggagttcgc gaagcgctaa gtgcgatcat tcgtaaagag
     1081 agcggctctc gcaataatat ttgcggccgg ccttagccag gcggtcgcgc tgtcccaatc
     1141 cccgcgcaca gcccactcga gtctttccag gaaccccgcc gtggtgcgcg actgggcaaa
     1201 tcgtctgacg gccaacgacc cgaagatccg cgccacggcc gaagctgcct tagtcaaacg
     1261 gtcggcgcgg gcgctgcctt tgctgagacg attcctgaac actgacaacg aagacctgca
     1321 tctggagact tttgagatca tccagcggat cggtccggcg gctattccgt tgatcattga
     1381 actgcttcgg gataaacgga cctctctgcg ccgcagcgcc gttaatgaat tgatcgacct
     1441 cgcgcctgat acagaatcga ttcagccggc gttgagacgg gccctgaaag acgaggattc
     1501 gatggtcgcg gccgatgccg cacgcgccct gggtgccctg ggcaaaaggg ccagtccttc
     1561 cgtaagcgct ctaatcaacg ctctgtcgca cgacgagccg cacgtccgca tttacgccgc
     1621 ggaggcgctg gcgtccattg gtccgaaggc ggacgcggcg actaagcacc tcgccagagc
     1681 cttgcgcgat ccaattcccg gtgtccgatg ggcggcggct gaggctctcg caggcatcgg
     1741 cccggacgca cagtcggctg tgcctcagtt gatcgaagct ttgcaggatg agttcctcta
     1801 tgttcgcatc tgcgcggccg aagcgctggg aagtatcggg ccgaaggcac tgacagccgt
     1861 ggaggcgttg agagcggccg caaacgatcc cgcactccgt atacaagctg agtgggcatt
     1921 gaatcgcatc gcgggcatcg agtctggaaa gcccgttggc ttaaccaatg cgcccgcgcc
     1981 ctccgtcctg ctccaactcc cgacgactgc ggctcaaacg ggcaatcctc ccattgactg
     2041 ggatacgacc acggggcgga acatcgtctg gagcgtcgag ttggggaacg aagtctatgg
     2101 cagtcccgtg gttgccggcg gtgtggtcta tgtgggcgcc gacaatacac ggcaactcaa
     2161 ccccgccttt caggaagatg cgggcgtgct tagggccttt cgggtgacgg atggcgcgtt
     2221 cctttggcag gatgtagcgc cgcgagtgga gcgcggcctg agggagtggc tgttgccttc
     2281 gactacaagt gctccttatg tagaaggcga ccgtttgtac tatgtcaccg ccgagtgtca
     2341 actccgttgc ctcgacaccc ggggtttcgg cgacggtgag aacaacgggc catatcggga
     2401 agaggtcttc aaagacaaag ccgcggcaga catcgtctgg caactggaca tgcccgcctt
     2461 gggtgtcttt ccacacgaag cctgcaatag cgacgtgttg tccctgggtg accttctctt
     2521 ggtcggtacc tccaatgggc agaatgaagg ccatacgcgc gtcccatcgc cgcgcgctcc
     2581 aagcttgatc gcggtgaaca agctctcggg cgaagtggtc tggcgcgcca tcgggccggg
     2641 agatcgggtg ctgcacggca actggtccag ccctgtgggg gcacgcgtca acgggcacat
     2701 gcaggtgctt tacggcggag gagacggctg gctgcgcgcc tacgacgcgg cgtcgggccg
     2761 ggaggtctgg caatttgacg gcaacccgaa aggtgcccgc tggcttccgc gccccggtgt
     2821 cctttcccgc gactttatca ttgcttcacc ggtcgtagcc gatggccgcg tcttcgttgc
     2881 catggggcag tctccggggc acggcaacgc accttcgttg gttcatgcgg tcagtctcaa
     2941 cggccagggg gacgttacta agagcgggct cctgtggacg tcgcgtgagg tcagccgcgt
     3001 agtgggaacg cccatcgtga acaacggtct gttgtacgtt ggggacgtag gcggaaccgt
     3061 tcattgtctg gacgcggtaa ccggtgccca actatggaag cacgagacgc acgaggccat
     3121 ctggggatgc ttcctgctgg ccggcgatcg gctttacgtc gggaacgaag ggggcttcat
     3181 gacggttctt cgtgccggac ggacaaagga attgctggcg caaatcgaaa tggatgcccc
     3241 gctctatgcg cgtccggctg tggtcggtga tgcactttat ctggccaccg cgagccgttt
     3301 gtacctcatc gcggcaaggc ctcgatccta atgcgttgtg cgtcacgatt cgtgggacag
     3361 aacaaacctc ttcacgacac gatttggcgg ggactttaat acgatcgccc tcgcctggca
     3421 gtacgcttgg taacaccacg aggagcttaa gcacgccacg acaaagtgag ccgtgtggga
     3481 cccgtgacga ctcgtcaagg ttctgacact ccgctagtgg actaagtctt ccgtcgcaga
     3541 accaccgcgg tcaggtcgtc ttgttgttct gtgccgccac agaatttctc gacggacgag
     3601 cgaagtcgcc caataacttc ttccgcagtg caatcgcgtg agtctcgaat cgtgtcttcc
     3661 aatcgctgaa gtccaaactg ctcaccgtct ctgttttccc attcatagaa gccgtcggta
     3721 atcacggcca tcaggtcacc cgattcgaga gaaatgttag tcgcgttgct gtaaggaacg
     3781 ccggcgatca tcccaagcgg aatcccatga gcctcgagac tctcaatctg gttcgtgctg
     3841 tgacggtaca ccaacatcgg tccatggccg gctgacagga ccttgacgct tgaatctgcc
     3901 ggatccagaa acaagaccgc gaaagtaacg aaacgatttg ctgagagatc agccgccagc
     3961 aggctgttca accgatcgag cagcccattc ttatctgcgc cagccagtaa actcgcgcgt
     4021 gagtaagcgc gacaggaagt actgaccagc gccggcccaa tgccgtggcc cgttgcgtct
     4081 gccaaactga ctgcgacgcg accgtccggc aacaattgcc aatcgaaata atcaccaccg
     4141 gtttgatcgg ctggttgatt ccaacctgca atctcgaagt aatccaactt gagtgtttgc
     4201 gaaggcagaa gaccctgttg aatggattta gcaatttcga gatcatgcgt tacctgcgca
     4261 agctcatgtt gtaattccgc ctcgtgcaat gcagtcgcga cgtaactccg aacttttgcg
     4321 gcgacggccg ccgccaggat accggccaga aatattaggc ccgcataaac tatgtaaagc
     4381 tgaaccggaa aaccacctgc ttcaactctt gaaccgtgga actttgcctc gacgtaaaag
     4441 acgacgaaca ggtaagagag tgccgacatg gttccggata caagtgtcat acccggactc
     4501 agacgtagta tcgaaagaat aatgaacaag aaatagacga gcatggcagg cgcgacgagc
     4561 acctggtaag gagtcatcca ctgacttaac aacaaaagga aaagcgcgat tgtcggaatc
     4621 tgactctcta aaatcacgtt tacgaaccac gttgccgggg gaacgtcttt cccacctctc
     4681 agggctcgcc tgattgcgcg caacacaaga aattcgtgcg cgctaatcat gaccagcgct
     4741 gcggtttgta cccaaagcag gtgaaaacct tcgaccctga ggccacgcag gattgtgtaa
     4801 aaggccaacg cagccaaaac cgcgaacaag ccaatgattc gatgcccttc gctcttcaga
     4861 atcgcgcgat agaacgcggg cgagtccagg tgctcggtat tcatgttatt agtcaccgcc
     4921 gcactaaaac actgggagcg cgggcgccct cgcccgcctt gagcgcgaag tgcgaataaa
     4981 tttcgagttc gattttcttc agagttctgt gcgtcacaac acaatgcgga cgagggcgtc
     5041 cgcgctccca gcgaatacga agatcctatg aaggctgaaa ttactgacgc ttacaggcca
     5101 tttcatgtgc gcgcccgccg ccgccgtttg acatgaagct gcgcgagcga acgggccagc
     5161 gaagcgttga ctgaagcaac ttcttcgtcg gaaatcttgt ctctgagtcg cgcttcggcg
     5221 cgacggcgtg cttcttcgat tttggcttcg tcgatatctt ccgcgggaat ggccatgtcg
     5281 gtcgcaatcg caacgccctt gccggaaatt tccaccagtc cttcgcccac ggcgagaaac
     5341 tgatcgcgac tgtccttgcg caccattagt tctcccggca acatttgtgt catcaggcgc
     5401 gtgtggtggg gcaggatcga gatttgtcca tcgggcgccc gcagtgcgac cagctggacc
     5461 tcgtcctgat aggccacgcc ttgaggcgta atgattctta actgaagcgt gtctggcatg
     5521 actgggcgca tcgtccgagt caaggctcgc gtcaaacctg ctcgatctct tcaatgccgc
     5581 ctttcatgta gaagtctgct tctgccacac tgtcatgctt gccatccaga atctctttga
     5641 agccgcggac agtttccgcg attggcacct gtttcccctg gcggccggtg aagacctggg
     5701 cgacgctgaa aggttgactc aggaactttt gaatcttacg cgcgcgcaaa acggtcagct
     5761 tgtcgtccgg cgatagttcg tcgaggccca aaatcgcaat gatgtcctgt agatctttgt
     5821 atcgttgcag cacggcctgc acccgccgcg ctacgtcgta atgcgtctga cccacaatct
     5881 ccggctcaag tgcgcgcgaa gtcgaggcca gcggatcaac cgccggataa atcccgagtt
     5941 cggcgattgc ccgctcgagt acgatggttg catccagatg agcaaaggtg gttgccggcg
     6001 cgggatcggt caaatcatca gccggcacat agaccgcctg aaaggaagtg atcgatcctt
     6061 tcttagtgga ggtaatgcgc tcctgtagag ctcccatctc ggcggctagc gtcggctgat
     6121 aaccaaccgc gctggccgtg cgtcccaaaa gcgaggaaac ttctgcgccc gcctgagaaa
     6181 atctgaagat gttgtcgatg aagagcagca catcctgatt tttctcgtcg cggaagtatt
     6241 cggttatcgc gagtcccgaa agcgccaccc gcagacgagc gcccggcggc tcgttcatct
     6301 gaccgtatac cagcgcgatc ttggaagact tgagatcctg ctgattgatg acgcccgcct
     6361 cggacatttc gttatagaga tcgttcccct cacgcgttcg ctcacccacg ccggcgaaaa
     6421 cagaaacgcc gccatgcaat ttggctatgt tgtttatcaa ctccatgatg accacggtct
     6481 tgccaacgcc ggcgccacca aacgcgccga ccttaccgcc cttcatgaac gggcaaatca
     6541 gatcgatgac tttgattccc gttgacagca gttccggcga cgtagattga tcaatcaaag
     6601 gaggagccgg gcgatgaatc ggatagtact tttcggccgc gaccggacct cgctcgtcga
     6661 cggcgtttcc ggtgacgtcg aagacgcgac ccataacgcc gtcaccgacc ggcatcttga
     6721 ttggtccgcc cgtatcctca acttcaaaac ctctcttgag cccttcggtt cccgacattg
     6781 atatggtacg tacccatttg tccccaaggt gctgctgtac ttccagagtc agcttcactg
     6841 gttcgccgga aactctaaat tcaaccgata gcgcgttgta gattgccggc attccgtcct
     6901 tgaactccac gtcgacaacc gggccggaaa cttgaactat tttgcctgta ctcatttgaa
     6961 aatcggcttt gccccgtcca ttcaggcggc ctgaccgccg gcgatttcta acagctcatt
     7021 ggtgatgttt ccctggcgca acttgttata ttcaagcgtc agatcttcca tcagactctc
     7081 cgcgttctcc gtcgcgttct tcatcgagac catgcgcgcg ctttgctcgc tcgctttcgc
     7141 gttaagcaaa acctgataca catagatatt gagatagtgt gaaaacatgt aactgagaaa
     7201 ctccgcggcg ccgggctcaa acaggcattc ttcctcgcgc gccggctctg ggtccgcgcc
     7261 ggttccggga atcttcaatc ctttgatctc accaaccggt aaatactcaa gcgacacggg
     7321 atgctgagtc agggtgttta cgaaacgcgt cgccagaata cgcacttcat ccacctcttt
     7381 cttcataaag agttcgcgtg caaagccggc gatcgccctg gcctccggga aagttggcga
     7441 gtcgccgtaa gcaaattccg cgatcaactg ccggcgcgtg ccggccaccc actgcgccgc
     7501 tttgcggccg gcggtgatga aaactgtgat tccgggatcg aaatgttggg ccagccgaaa
     7561 caggttgctg ttcaacgcgc cgcagagtcc tttgtccgca gcgacgagaa tgattgcgcg
     7621 ctttcttact gggcgaactt ccaggaaagg atgtttgaac tctggcaata acgtggtggc
     7681 ttcgcgctga aaccgataga ggagttgaac aaatgggcga ccggcgagcg cggcttcctg
     7741 ggctttccgc atcttggacg cggccaccat ttgcatggct ttggtaatct gcgccgtgct
     7801 cgttatagag ctgatccgcc tgcgaagatc gcgtgggctg tgcatattac ttccaacctt
     7861 gcttgaatga atccgcggcc gctttcagct cggccgtcac ttcgtcagtg atgacttttt
     7921 ggtgcgcgac cttttccagc aacgagcttt ttcgtacggt gagaaactcc gtaagttttt
     7981 cctgaaactc ttttattcga ttcaattcga catcgtcgaa gtacccgttt tgcattgacc
     8041 aaacgagggc gacctggagt tcaaccggaa ccgggctatg tcgcggctgc ttaaagacct
     8101 ctacgatacg tttgccgcga tcaatctgtg cctgtgtttt gggatcgagt tccgacccga
     8161 attgagcaaa ggccgcaagc tcgcgaaact gagcgaggtc gcccttaagt tgtccggcca
     8221 cctgcttcat tgcttttaac tgcgcggctg aaccgacacg agaaacagaa agaccgacgg
     8281 agatagccgg acgcacaccc tggtaaaaca aatcggtttc cagatagatt tggccgtcag
     8341 ttatcgaaat gacatttgtc ggaatgtaag ctgaaacgtc tcccgcctgg gtttcaacga
     8401 tcgggagcgc agtcagtgaa cccccgccgt atttttcgcc gacgcgtgcc gcgcgctcca
     8461 gcaaacggct gtgcagataa aagacgtccc cgggatacgc ttcacgcccc gagggccgct
     8521 tcagcaccag gcaaacctgg cgataagcca cggcgtgctt ggacaagtcg tcataaatga
     8581 tgagggcatc catgccgtgg tccatgaacc actcgcccat cgccgcgccg gcaaaaggcg
     8641 ccagatactg gtttgtggct gagtctgaag cgggagaagc aacgatgatt gtgtacggga
     8701 gggcgcccgc ttcctcgagc acctggatta ttcgagcgat gctcgattgc ttctggccaa
     8761 tcgcgacgta gatgcaatac atcggacgaa actctttgtc attcgacgcc tcgcccgcgc
     8821 tgttaagtcg cgcttgattg atgatcgtgt cgacaccgat tgtggtctta cccgtcgaac
     8881 ggtcaccaat aatcagttcc cgctggccgc ggccgatcgg aatcatcgcg tcgatcgcca
     8941 tgattcccgt ctgcagcggc tgtctcaccg agctccggcg aatgataccg ggggcaatcc
     9001 tttcaaccgg ataagaggtg tcggaattaa taggaccttt accatccaac ggttcgccaa
     9061 gcgtgtttac gacgcgaccc agcagactct ttccgacagg tactcgcagc aggttgccgg
     9121 tagtacgaac ttcatcaccc tcttccaggc gcgtgtaatc gccgagtatc acaaccccga
     9181 cctcagtttc atccaggttc aaggccaggc ccgtgagacc atggccgagg tcgatcattt
     9241 cattgagcat cgcatcgctg agtccttcaa tccgcgcgac cccatcccca atctcacgaa
     9301 tgacaccagt attttgtctg acggccaccg cctttgcgcc gattagctgc gcttcgattt
     9361 ccataagcag atcaggcatg atcgctacct cgtacccctg cgacgtcacg acacatcact
     9421 aaaagctctc ctgcagcgcc gccagacccg cctttacgct gccatcatag acatcgttgc
     9481 cggcgcgaat gcgcataccg ccgatgagcg ctggcctttc gctaaacgac atcgcgatgt
     9541 caccgccgta taaccgcgcc aaattcgttt tcacgtgagc acgtaaatgt gccgagagcg
     9601 gcaccgcgct ttggacgtcc gccgagtgtg cgaattgctc cagtcgcact aatctctcga
     9661 attggtttgc gagcgccagg tagccgcgct tttttccggc gagaatttca ttcacggtcc
     9721 gacggacacg cgcctcgtct aaagatccat caacaaagca ccgccggaac atttgtcgcg
     9781 ctgcccgttt agtttgcttc ggtgttctca tcgtgccgtt agttcctttg cggtcgcttc
     9841 gttcaagcgc gtctgatctt cagcggtcaa aatcctgccg gtaatcgcgg cagcggtctt
     9901 caccacgagc tgcccgactt cccttttcaa ctgtgccatc atgcgtgtgt gctgagaggc
     9961 ggccacttcg tgcgctgtaa taatgatttg ttgggccgca gctgtggctt ttttggtttc
    10021 ctgctcgcgc aaacgtgtcg cggcttcccg cgcttctgcg atcaattgac tggcctcaag
    10081 attggcttga tccagcacct gctcacgcat tgtttcagtc tttgcgagtt ccacctttat
    10141 ttgctcgctg ttcgccagac cctgagcgat tagatctcgc cggtgggcca acatcctcag
    10201 cactggccta tatgcaaata ggtagagcag cgtgcagacg atcccaaaac tgatgatctg
    10261 cgaaatcaga tgtcgccaat ccactccaaa tgtcgacgcg atctcttgta tctggccgcc
    10321 gctgccgccg tttaccacca ttaagagcgc attcatgcca gcacctttca atgcactcgt
    10381 tccagtagcc tgcggtcgct acttcacgag gaaaagcgta tagaagacga tggcttcggc
    10441 gaaagcgatc gccagga
//
LOCUS       DATDBY010000332         2245 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_3053639, whole genome shotgun sequence.
ACCESSION   DATDBY010000332 DATDBY010000000
VERSION     DATDBY010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3053639"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..921
                     /locus_tag="VIT19_06155"
     CDS             <1..921
                     /locus_tag="VIT19_06155"
                     /inference="COORDINATES: protein motif:HMM:NF005495.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY5838602.1"
                     /translation="LAARTQGALRELVEEIRAGGGEAEYVVADVGDPQQVKDIADLAL
                     RKFGGFDTWVNNAAVSIYGKMEDVAVEDHRRLFDTNYWGLVYGSLAAAKHLKGRGGAL
                     INVGSVLSDRAVPIQGTYCASKHAVKGFTDALRMELEHDGAPISVTLIKPSSIDTPYR
                     QHAKNYMREEPKNPPPVYAPEPVAEAILYAAEHPVRDIYVGGAGRALTVGAFVAPRLT
                     DKVMEFQMFDAQKEDFPSASHHNGLDHPSGSLLERGSYSGHVSESSLYTKSSLHPFIA
                     AGLFATGLGLAYAAARALRNGSHLTTSVRE"
     gene            complement(974..1927)
                     /locus_tag="VIT19_06160"
     CDS             complement(974..1927)
                     /locus_tag="VIT19_06160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838603.1"
                     /translation="MKSIGPIGLVLLSMVFTHPVARPVPPGSSTTGIFVATSPCDAVS
                     MAALKIPATAKCEMIKWHLTLFEDAKTLTPTTFELNCVYGLAEQGTLGLSKGGTKIGW
                     KGSWKIVPGAGANAYELDRGVPNGTMSFLKVDQNLLHLLDQDKSLAIGNAGWSYTLNR
                     TGDRGRNIKQAAGTSQLAFTTTYASQITTDSSMLGRFVGRSPCQDVARELSKVVTPDC
                     IKVKWDLSLYQDPITLAPTTYKLRGTFFRERVREGKWTIVRGTKTSPNAVIYQLDPDN
                     PQGSLFLLRADSNILFFLDRDRNHLVGNANFSYTLNREAAR"
BASE COUNT          506 a          612 c          598 g          529 t
ORIGIN      
        1 ttggctgccc gtacccaagg ggcgctgcgc gaactggtag aagagattcg cgccggcggc
       61 ggagaagccg aatacgtcgt tgctgacgtt ggtgaccccc aacaggtaaa ggacatcgcc
      121 gatctcgctc ttcgcaagtt cggcggcttc gacacatggg tgaacaacgc cgccgtttcg
      181 atttacggaa aaatggaaga cgttgccgtc gaagaccatc gcagattgtt cgacacgaac
      241 tattggggcc tggtttacgg atcgctggcc gcggcgaaac acctgaaggg acgcggcggc
      301 gcacttatca atgtcggcag tgtgctctca gatcgcgcag tccctattca agggacgtat
      361 tgcgcttcga aacacgccgt aaaaggtttc accgacgccc tgcgcatgga actggaacac
      421 gatggcgcgc ccatctccgt cacactaatc aagccttcat caatcgacac gccttaccgg
      481 caacacgcga agaactacat gcgagaagaa ccgaagaacc ctccgccggt ttacgctcct
      541 gagccggtag ccgaagcaat tctttacgct gccgagcatc cggtgcgcga tatctatgtg
      601 ggtggagccg gccgggcgct cacagttggc gcgttcgtcg cgccgcggct gacggacaaa
      661 gtgatggagt ttcagatgtt tgacgcgcag aaggaagatt ttccgagtgc cagtcatcat
      721 aacggactcg atcatccttc gggctcgcta ctcgagcgag gcagctactc tggtcacgtt
      781 tcagaaagca gcctttacac aaaaagctcg ctgcatccct ttatcgccgc cggtctattc
      841 gccacgggcc tgggtttggc gtacgccgcc gcgcgcgcct taagaaacgg ttcgcattta
      901 acgacgagcg ttcgggaata aaaagggcga atcggcgcct caaggttgtg ttgaaggtct
      961 tgagggccct ggctcaacgt gcggcttctc gattcagggt atagctgaag ttagcatttc
     1021 caaccagatg gttgcgatct ctatcaagga aaaaaaggat attactgtct gctctcagca
     1081 ggaataaaga tccctggggg ttatccggat cgagctgata gatcaccgca ttcggacttg
     1141 tttttgtgcc gcgaacgatt gtccactttc cttcgcgaac acgttcccga aagaaagtgc
     1201 ctctgagctt gtaggtggtg ggtgcaagtg tgatcgggtc ctggtagaga ctgaggtccc
     1261 atttcacttt tatgcaatcg ggagtaacaa ccttgctcaa ttctctggca acgtcttgac
     1321 aggggcttct ccctacaaaa cgtcccagca tggatgaatc agttgtaatt tgcgacgcgt
     1381 atgtcgtggt aaaggcgagc tgagacgtgc cggctgcctg cttgatattc ctgccgcgat
     1441 cgcccgtccg gttaagcgtg taactccaac ccgcatttcc gatcgccagg ctcttatctt
     1501 gatccaacaa gtggagaaga ttctgatcga cctttagaaa agacattgtg ccgttcggca
     1561 cgccccggtc gagctcataa gcattcgcac ctgcgcctgg aactatcttc cagcttcctt
     1621 tccatcctat ttttgttccg cctttggata atccgagtgt tccttgttca gccaggccgt
     1681 acacgcagtt aagttcaaac gttgttggag taagtgtttt ggcgtcttcg aaaagagtga
     1741 gatgccattt gatcatctcg cacttcgcag ttgccggaat cttgagcgct gccattgaaa
     1801 cagcatcaca cggactggtt gctacaaaaa tgccggtggt agatgaacct ggaggcacag
     1861 gccgggcgac gggatgagta aagaccatcg ataaaagaac gagcccgatg gggccaatac
     1921 ttttcacgat ctcctccttc cgacgagaac tcaaccaacg ctaaggcaac atatctatac
     1981 gacagcggtt gcgctcatgt tcttcaactt tgtcacggta ttttacaggt ttccccgcgc
     2041 acgttacatc ctggagacct tccgcaagtc tcataggctt ttcgtctcga aacccccggg
     2101 ttctctagcg attctgtaaa tagctatccg gacttagaag cgctttctgc atctgctcga
     2161 gaaacctgcc tacgtgcaat ccgtccatta gtgcgtggtg aacttcgacc gagatgggca
     2221 gccacgtgcg accgtcatct tccgc
//
LOCUS       DATDBY010000333         2148 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_841655, whole genome shotgun sequence.
ACCESSION   DATDBY010000333 DATDBY010000000
VERSION     DATDBY010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841655"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..2064)
                     /locus_tag="VIT19_06165"
     CDS             complement(160..2064)
                     /locus_tag="VIT19_06165"
                     /inference="COORDINATES: protein motif:HMM:NF013491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HEY5838604.1"
                     /translation="MKLAQRWSAVLLLMLCAIPAAAQRPAPKPPGWAQEVRSQAVFDL
                     LAVVYDPDTPYALPHVMFVIDRQNKNRIYYVNSKLYKFHKDFVNGTYLSLERGQVFFE
                     NNYIKPNRRFILGTVAYQTPVRKWTFEYWEGDLIPPEQIKLTSDVINRTFFTPVAYKP
                     NSLRQEQASANIAGLARVLQTEILRGQDYQALNVAKGLGRIHVIQKLDDHVEIGSNEI
                     LVLDEVPIHLPPVAGIITSKPSTPLSHINLLAKGWGVPNAYIKNAHELLKQYDGWWVE
                     FDARRDTYTIKRADNTALAEYQQRLKQRRDIMTPRFDLAVTRLATLNEQRRSSSIAYG
                     AKSANLGELIRARLPGFAVPPGFTVPFSYYDAFIKQNEIDDEIYELLNDQKFIHDPVH
                     RRGELTKLREKIQRGKFDAKLRAEVLRRWRADLGGRGVFARSSTNSEDLPNFSGAGLY
                     SSMPNLKSDDQLIEGIKTVWASVWNSQAYEARERAGIDHTKVFMAVLIQDGINSESSG
                     VMITTDPFNRDAREAIYISAKRGLGIKVVEGQRVAEQVVFRPRANAVQVLTRSEEDSL
                     LTFDENGGVKEIPISGERAVLSDAVVRRLAAAGQNIKRVFGGRDQDIEWAYMRGQIYI
                     VQARPFIAGG"
BASE COUNT          445 a          629 c          562 g          512 t
ORIGIN      
        1 aggcgcgcca tgttgcgtct gaaattccca gcgttctgat tcgactgctt tagtgtgacc
       61 gctgatgccg aatccaattg cgcacagcag cgcgattgcg cccacaaacc aaaacttcct
      121 gtatttcatc ccgacacctc acttccgaat tatcaaagac taacctccgg caatgaacgg
      181 tcttgcctga acgatgtaga tttgcccacg catgtaagcc cactcaatgt cctggtcgcg
      241 tccgccgaat acgcgtttga tgttttgccc cgcggccgcc agtcggcgaa ccaccgcatc
      301 gctgagaact gctcgttcgc cgctgatcgg aatttctttg acgcctccgt tttcgtcgaa
      361 cgtcagcaaa ctgtcttctt cggaacgtgt cagcacttga acagcgttcg cgcgcgggcg
      421 aaaaacgact tgctctgcaa ctctctgccc ttcgaccact ttgatgccga gcccgcgttt
      481 ggcgctgatg tagatggctt cgcgcgcgtc gcgattgaac ggatccgtgg tgatcatcac
      541 gccagagctt tcggagttaa tgccgtcctg aatcagcaca gccataaata ctttcgtgtg
      601 atcaatcccg gcgcgctcgc gtgcttcgta agcctgagag ttccaaaccg acgcccacac
      661 ggtcttaatc ccttcgatca attgatcgtc gctcttgagg ttcggcatgc tggagtagag
      721 ccccgccccg ctgaaatttg gcaagtcctc gctgttcgtt gagctgcgcg cgaacacgcc
      781 tcgaccgcca aggtcggctc gccaacgacg cagcacttcg gcgcgcagct tcgcgtcgaa
      841 ctttccccgc tgaatctttt ctcggagttt cgtcagctcg ccgcgccgat gcaccgggtc
      901 gtggatgaac ttctgatcgt tcagcagctc gtaaatttcg tcgtcgattt cgttctgttt
      961 gatgaacgcg tcgtagtacg aaaacggaac cgtgaatccc ggcggaaccg cgaaacccgg
     1021 gaggcgcgcc cgaatcaatt cgccaaggtt cgccgacttt gctccatagg caatcgagga
     1081 agaccttcgt tgttcattca aagtcgcgag ccgcgtaacc gccagatcga atcgcggggt
     1141 catgatgtcg cgacgctgct tcagccgctg ctgatattcc gccaaagctg tgttgtccgc
     1201 acgcttaatc gtgtacgtgt ctcggcgcgc gtcgaactcg acccaccagc cgtcatattg
     1261 cttcaacagc tcgtgcgcat tcttgatgta ggcgttcggg acgccccagc cttttgcgag
     1321 caaattgatg tgcgacagcg gcgtcgaagg tttgctggtg atgatgccgg cgaccggcgg
     1381 caagtgaatc gggacttcat caagcaccag aatctcattc gagccaatct ccacatggtc
     1441 atcaagcttc tgaatgacgt gaatccgacc gaggcctttg gcgacgttca gcgcctgata
     1501 atcctgtcct cgcagaatct ctgtttgtag cacgcgcgcc aaaccggcga tgttcgctga
     1561 ggcctgctcc tgccgcagcg aattcggttt gtaagcaacg ggcgtgaaga atgtccggtt
     1621 gatgacatcg gaagttagtt tgatctgttc tggtggaatc agatcgcctt cccaatattc
     1681 gaatgtccat ttcctgactg gagtttgata cgcaaccgtg cccagaatga atcggcgatt
     1741 cggcttaata tagttgttct cgaaaaacac ctgaccgcgt tcaagcgaaa gataagtgcc
     1801 gttgacgaag tccttgtgaa atttgtagag cttcgagttg acgtagtaga tgcggttctt
     1861 gttctgccga tcgatcacga acatcacgtg cggcaaagcg tacggcgtgt ccgggtcgta
     1921 tacgaccgca agcaaatcaa atactgcctg agagcggacc tcctgcgccc accccggggg
     1981 ctttggtgcc ggccgttgcg ccgcagcggg gatggcacac agcatcaaca gcaaaacagc
     2041 cgaccatcgt tgcgctagtt tcatatttct ttacttcagg tggctgatta cagcctcgcc
     2101 ctcactccga agcaattcta ccagatcgtc aacgtgccgc tgctcagt
//
LOCUS       DATDBY010000334         8727 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2902560, whole genome shotgun sequence.
ACCESSION   DATDBY010000334 DATDBY010000000
VERSION     DATDBY010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8727
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2902560"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2538
                     /locus_tag="VIT19_06170"
     CDS             <1..2538
                     /locus_tag="VIT19_06170"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5838605.1"
                     /translation="NGHVKVLDFGLAKLMDRSTEGDQADTEAVTRAFVQTDAGVVMGT
                     SLYMSPEQARGKGVDARSDIWSLGVILYEMAAGRAPFMGETKTDVIVAIAKSEPSPLA
                     RFAPGLPPEFEWVVMKALRKSADERYQTIKELESDLKKLKQKVVFQTELERSMGPDRL
                     TGAITPFGDTEVPHHSSHLSFQASLPATMHSTSTVQSAAQTRASSVEYILEGIKRHKL
                     RAAMVAFAALLLAGGIWYLGFRKPTMALTDKDRILLADFVNTTDDTVFDVTLKQALAT
                     QLRQSPFLDILSEDRVRDALKFMEKSPDEPVTRDIALEICRRQGIEATLIGTISSIGS
                     RYVITLDALNAETGDTIASDQAEAENKEQVLRSLGEAATRLREKLGEKLSSIQKYDVP
                     IEQVTTSKLEALRYYSVGFQQHSSGRYTAAIPLYQHAIEVDQKFAIAYARLASCYNNT
                     KQYEAARAASSKAYEYRDRASEREKLYVEWNYYGAVTGEIDRAADALDVWKRTFPRDW
                     EPHHLLAVRHTLTGPFQSGVDEASEAVRLNAREPKAHANLANAFIGLNRFDEGKKILQ
                     NALGQNMETESMHTHLFRLAFVNGDATGMNEQVVWATKNSGFLANVYQAEAAEFYGKY
                     AEANQFSDKAVDWAEHNNKDAAAQLISKRAMRAATFRDCGKITAVTAKALSYSRDLSN
                     LEHSANALAACGQAAAAQSLVDEMQKRFPQDTLLNIVWIPLIRAQFELARGNGAPAVQ
                     LLESARKYDVYGDFWPQYVRAQAYAKQGNGAQAATEFKNILDHRGWYPLSPVYALAQL
                     GYARASAQSGDNATARKAYQDFFDLWKNADATVPFVAEARQEYDKLK"
     gene            2617..3360
                     /locus_tag="VIT19_06175"
     CDS             2617..3360
                     /locus_tag="VIT19_06175"
                     /inference="COORDINATES: protein motif:HMM:NF001030.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEY5838606.1"
                     /translation="MSGHSKWHSIKHKKGATDAKRGKLFTKFIKELTVAARTGGGDPD
                     SNARLRKAISDAKAGNMPNDTIDRAIRRGAGEEEGVNYDEITYEGYGPGGVALLIEAM
                     TDNRNRTVAEIRHMFSKNGGNLGESGSVGWMFEKKGYLVVDKTAKAEDELFDLAIEAG
                     AEDIRDDEDNWEIITAPDNFEAVQNALKSAGITPQVAEVEMLPQNYIKLEGAQANQMV
                     KLMESLEDHDDVQKVSANFDMSAADMAAA"
     gene            3420..3785
                     /locus_tag="VIT19_06180"
     CDS             3420..3785
                     /locus_tag="VIT19_06180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838607.1"
                     /translation="MAESNNNEVIGFIASTVETILNRLEAVEEHMATKDDLARLDGRL
                     NERLGSFDGRLSERIEVATTSIRGDIEQVHLRLDSLDHRISSRDEHFDAEISRLRSAV
                     YVLGKDRPDVLRLLGYQTP"
     gene            3834..4394
                     /gene="ruvC"
                     /locus_tag="VIT19_06185"
     CDS             3834..4394
                     /gene="ruvC"
                     /locus_tag="VIT19_06185"
                     /inference="COORDINATES: protein motif:HMM:NF000711.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEY5838608.1"
                     /translation="MRVLGIDPGSQVTGWGVVEGEASGRSYRMIEFGVVRLNSAATFS
                     SRLLKISRALDEVISRLKPDACAIEEAFLATNPKVTLKLGQVRGVALLAAESAALEIG
                     EYSPRTIKQTVAGYGNAEKRQVQEMVRLLLSLSTVPEPHDAADALAVAICHFHHAGLN
                     RQLAAAEPAMKAAAASMLATRRRMTR"
     gene            4591..8433
                     /locus_tag="VIT19_06190"
     CDS             4591..8433
                     /locus_tag="VIT19_06190"
                     /inference="COORDINATES: protein motif:HMM:NF015140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007154 - cell communication [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Calx-beta domain-containing protein"
                     /protein_id="HEY5838609.1"
                     /translation="MKQLVPLFSPTPRRVFCLFVVAVVALIAIRSTPTTQANRNETGG
                     QVLALLDPPPSPLAGSLTVNTLGDQADASVGNGICDVDTGTSGDQCTLRAAIQEANAV
                     FGADTIGFTVSGTINLTGALPQLITDMTIQGPGSAQLTVRRDTGGEYRIFSTNNRTIS
                     ISGVTITNGRTPNGAVSSTNNGQQGGSGAGIDAAGGVLTLTDVVVTGNRTGDGGDSTA
                     GATLQGGWGGFGGGIVASGTVTMTNVVISNNVTGKGGTGGYAGGGGYAGGLYLGPGPA
                     TLTNVTVSGNLTGDNGTSIGGGSSGNSGYGGGIYSNSTQLTLNNVTISGNTTGNCTNS
                     GAGPGAGLFIYSGTVTIVDSSITGNRTGNATGFSGQAGYGGGIANFGNLTISRSNISG
                     NRTGDSESESGNGGGGIYNGFILRVSNSTISNNVGGSGNSVAGTGGGILAGGTVSLTN
                     CTIAGNSSFSNNGPGVSFGNNTNNVRNTIIANNGPVGVSDIRGNATSQGHNLIGKSDG
                     SNGFVNGTNGDQVGTLATPLNPQLASLGNNGGPTQTQALLATSPAIDAGQNCVVDAAH
                     CGDSNIPQLLRDQRGFNRIVDGPDANTTTTVDIGAYEKQAVFPNLPDASTNEDTPAIV
                     AFDLNDIASVTSVTASSSDSALVPNNPANISVVLANSTAVLTFNPASNLVGMTNITVT
                     VNRTSGSTNDIFVLTVVPVNDAPSFAKGADQSVNENDPAQTVNNWASAISAGPADESP
                     QIVTFQIVSNSNAGLFSVAPAVSSNGTLTYTPATGASGTAQIVIRLSDNGTTANGGND
                     TSVTQSFNINILEGGNLHFSSFSYYVSESAGSALITVSRSGGSAGEARVNYATSNAGA
                     TAGEDYAATSGTLTFANGVTSQTFSVPILGDTFDEQDFESIALTLSSPAGSGGLGSPS
                     TSTLNINDDDARPTLSINDVQVSEGNSGTIDAVFTVTLTGQTALQVTVGFGTSNNTAT
                     LSDYQPTSGQLTFNPGETTKTITVPIVGDTLGEINETFFVNLNFSTNANIIRFRGTAT
                     ILDNDTSVQFNSATYLPNESFVSVSFTVTRTGITGGSSTVNYATSDSAGSAACGTATG
                     NASANCDYTGASGTLSFAPGETSKTFNVPFVDDGWLEGNESFMLTLSSPTGATLGSPA
                     TAIVTIVDNDLAGAVPVLFLESGTSRAGALNSVTFVRGPFSVVESSNFSVDKQTRLIL
                     YTSNLRLTQADPGYLSVQASGVDLPIEKVGTVFGVAGLDASYIVVKLPLELPTGDLQL
                     IVSLRGTPSNAGVLQIVP"
     gene            complement(8539..>8727)
                     /locus_tag="VIT19_06195"
     CDS             complement(8539..>8727)
                     /locus_tag="VIT19_06195"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5838610.1"
                     /translation="HRLRQNPKLETVPIMIVTGQDPEKYRTSAIAEGCDDFLIKPIDF
                     DRLDALLDYYAPTGKLAA"
BASE COUNT         2004 a         2437 c         2484 g         1802 t
ORIGIN      
        1 aacggtcacg tgaaggtgtt ggacttcggt ttggcaaagc tcatggaccg ctcaaccgaa
       61 ggcgatcagg cagacacgga agccgtgaca cgcgcgtttg tacaaactga cgcgggcgtt
      121 gtgatgggca cctcgctgta catgtcgccc gagcaagcgc gtggtaaggg ggtcgatgca
      181 cgcagcgaca tttggagcct cggcgtgatc ctttacgaga tggccgccgg ccgcgccccg
      241 ttcatgggcg aaacgaaaac cgatgtcatc gtggcgattg ccaagagtga gccttcgccg
      301 ctcgcccgct tcgcgcccgg acttccgcct gagttcgagt gggtggtaat gaaagcgctt
      361 cgcaagagcg ccgacgagcg gtaccagacg atcaaggaac tcgagtccga tctcaaaaag
      421 ctgaaacaga aagtcgtctt tcagacagag ttggaacgct ctatgggtcc cgaccgtctc
      481 accggcgcga tcaccccctt cggtgacacg gaagtgcccc accactcttc gcacttgagt
      541 tttcaagcgt cgctcccggc gacgatgcac tctaccagca ccgtccaaag cgcagcgcaa
      601 acgcgcgcgt cgagcgtgga gtacatcctt gaaggcatca aacgtcacaa actcagggcc
      661 gcgatggttg cattcgcggc gctgctgctc gccggcggga tctggtacct cggttttcgt
      721 aagccgacca tggcgttgac tgacaaagac agaatcctgc ttgcggactt tgtgaacacg
      781 acggatgaca cggttttcga cgtgaccctg aagcaagcgc tggccacgca actgcggcaa
      841 tcgccgtttc tcgacatcct ctctgaagat cgggtgcgtg atgcgctgaa gtttatggag
      901 aagtctccgg acgagcccgt gacgcgtgat atcgctctcg agatctgccg gcgccagggc
      961 atcgaggcga cgctaatcgg gacgatttcc agcatcggta gtcgctatgt gatcacgctc
     1021 gacgctttga atgcggagac cggtgacacg attgcgtcgg atcaagctga ggccgaaaac
     1081 aaagagcagg tgctgaggtc gcttggcgag gccgcaacgc gcctgcgtga aaagctcggc
     1141 gaaaaacttt cctcgatcca gaaatacgac gtgcccatcg aacaggtgac aacgtcgaag
     1201 ctggaagcat tgcggtatta ctcagtcggt ttccagcaac attcaagcgg ccgctacacc
     1261 gccgcgattc cgctttatca acacgcgatc gaagtcgatc agaagttcgc aatagcgtat
     1321 gcgcgcctgg cgagttgcta caacaacacg aaacaatacg aagcggcgcg ggccgcttca
     1381 tcgaaagctt atgagtaccg cgaccgcgcc agcgaacgcg agaagcttta cgtcgaatgg
     1441 aactactacg gcgcggtgac cggcgagatt gaccgagctg cggatgcgct cgatgtgtgg
     1501 aaacggacat ttccccgtga ctgggagccg caccatctgc tcgccgttcg ccacacgctg
     1561 accggcccgt ttcaaagcgg tgtcgatgaa gcgagtgaag ccgtgcgctt gaatgcccgg
     1621 gaaccaaagg cgcacgccaa cctggcaaat gcttttatcg gtctgaatcg gtttgacgaa
     1681 ggaaagaaga ttttgcagaa cgctctcggt caaaatatgg aaaccgagtc gatgcacacg
     1741 cacctcttcc ggctcgcgtt cgtgaacggc gatgcgacgg ggatgaacga gcaggtcgtt
     1801 tgggctacga agaattcggg attcctggcg aacgtctatc aggctgaggc ggcggagttc
     1861 tacggcaagt atgccgaggc gaatcaattc agcgacaagg cggttgactg ggctgaacac
     1921 aataacaagg acgcggcagc ccagctaatt tcgaagcgtg ctatgcgcgc ggccacattc
     1981 cgcgattgcg gaaaaataac cgcggtcacg gccaaagcat tatcttactc ccgcgacctc
     2041 tcgaatctgg agcactcggc gaatgccctc gcggcgtgcg gacaagctgc cgcggcccaa
     2101 tcactggttg atgaaatgca gaagcgattt ccgcaggaca cactgctgaa cattgtctgg
     2161 attcctttga ttcgtgccca gtttgaactg gcgcgcggta acggcgcgcc agctgtccag
     2221 ttgctcgagt cggcgcggaa gtacgacgtg tacggcgatt tctggccgca gtatgttcgt
     2281 gcccaggcgt atgcgaaaca gggtaatggc gcgcaagcgg ctaccgaatt caagaacatc
     2341 ctcgaccatc gcggctggta tccgctatcg ccggtttatg ctttggcgca acttggctac
     2401 gcgcgggctt cggcgcaaag tggcgacaat gccacagccc gcaaggccta tcaggacttt
     2461 ttcgacctgt ggaaaaatgc tgatgcgacc gtgccttttg tcgccgaagc tcgccaggaa
     2521 tacgacaagt tgaagtagcc cgcctgctac ctcgacgcgc ggcccgcgtg atatagtttg
     2581 ccctcaatca aaccaactca ataaggatct ttttccatgt cgggacattc gaagtggcat
     2641 tcgattaagc acaagaaagg cgcgacagat gccaagcgcg gcaaactctt cacgaagttc
     2701 atcaaggaac taaccgtcgc ggcgcgcacc ggcggcggcg atccggactc aaacgcgcgt
     2761 ttgcgcaaag ccatctccga cgcgaaagcc ggcaacatgc ccaacgatac gatcgaccgc
     2821 gccattcgcc gcggcgcggg cgaagaagaa ggtgtcaact acgacgagat cacctacgag
     2881 ggctatggtc ccggcggcgt cgcgctgcta atcgaagcaa tgaccgacaa tcgcaatcgc
     2941 acggttgcgg aaatccgcca catgttttcg aaaaacggcg gcaaccttgg cgagtcgggc
     3001 tcggtcggtt ggatgttcga gaagaagggc tacctggtgg ttgataaaac cgccaaggcc
     3061 gaagatgaac tgttcgatct tgcgatcgaa gccggcgctg aagatatccg cgacgatgaa
     3121 gacaactggg aaatcattac cgcgcccgac aatttcgaag cagttcagaa cgcactcaag
     3181 tcagccggaa ttacgccgca ggtagccgaa gtcgagatgc tcccgcagaa ctacatcaag
     3241 cttgaaggtg cgcaagcaaa tcagatggtc aagctgatgg aatcgctcga agaccacgac
     3301 gatgtacaga aggtctcagc gaactttgat atgagcgcag ccgacatggc ggcggcttga
     3361 ggttgccaaa ttgttgcgcc ggataacgat gagtttctat gttacggtca tcaccatcag
     3421 tggctgagtc gaataacaac gaagtaattg gtttcatcgc cagcacggtc gaaactatcc
     3481 tcaatcgcct ggaggcggtc gaagaacaca tggcgacgaa ggacgatttg gcgcggctcg
     3541 atggccggct gaatgaaaga ctcgggagtt tcgacggccg cttgagcgaa aggattgaag
     3601 tcgcgacgac ctcaattcgc ggcgacattg aacaggtaca tttgcggctc gactcgctgg
     3661 atcatcgcat ctcttccagg gacgagcatt tcgacgctga aatctctcgc ctgcgtagcg
     3721 cggtctacgt tctcggcaaa gatcgtcccg atgtgctccg gcttctcggc taccaaaccc
     3781 cttaatttac gaaaactaat gacagcttaa tcgtgccgtg gtaacgtcgc ggcgtgcgtg
     3841 ttctcggaat cgatccaggc agtcaggtca ccggatgggg cgtcgttgaa ggtgaggcga
     3901 gcggccgcag ctatcgaatg atcgagttcg gggtcgtgcg actcaattcc gccgcgactt
     3961 tttcttcacg ccttctaaaa atcagtcgcg cactcgacga agttatctcg cggctgaagc
     4021 ctgacgcctg cgccattgag gaagccttcc tcgctaccaa tccgaaagtt actttgaagt
     4081 taggacaggt gcgcggggtc gctttgcttg ctgccgagag tgcagcgttg gagatcggtg
     4141 agtattcacc acgcacgatc aagcagactg ttgccggcta tggaaacgcc gagaagcgac
     4201 aggtccagga gatggtgcgc ctgcttttgt ctctgtctac agtgccggaa ccacacgacg
     4261 cggccgacgc cctcgcagta gcgatttgcc atttccatca tgcgggactt aatcgccaac
     4321 tggcagccgc cgagcccgcg atgaaagccg ctgctgcgag catgctcgct actcgccgcc
     4381 gcatgacccg gtagcgcgcc cgctggcttt ttgttcccaa ctcattctga ttctccgttg
     4441 ttatgcgact ggccttgtgc tatcttccgg ccagcgtaac acccgacccg gcgcctggtt
     4501 ttggaagtca cttacaaaac ctaagatcat tatcaagtac gacgccggtg tgctcgcccc
     4561 agacaccact cagtattgga cggaagggca atgaaacaat tagtccccct tttctcaccc
     4621 actcctcgga gagtgttctg tctgtttgtg gtcgctgtcg tcgcattgat agcaatccgc
     4681 tcaaccccaa cgactcaggc gaatagaaac gaaacgggtg gccaggtgct ggcgctgttg
     4741 gaccctcccc cgagcccgct ggctggatcg ctgacggtaa atactctggg cgatcaggcc
     4801 gacgcgagcg tgggcaatgg catctgtgac gttgatactg gaacttcagg cgatcagtgt
     4861 acgttgcgag ccgccattca agaggccaac gctgtgttcg gcgctgacac gatcggtttc
     4921 actgtctccg gcacaatcaa tttaaccggt gcattgcctc agctcatcac cgacatgact
     4981 atccaaggcc ccggttccgc gcagctaaca gtccgtcgag acacgggagg cgagtaccgg
     5041 atatttagta ccaacaaccg tacaatcagc atctccggag tgacgatcac taatggtcgc
     5101 actccgaatg gcgccgtctc atcaacaaac aatggtcagc aggggggcag tggcgccggc
     5161 atcgacgcgg cgggtggcgt acttaccttg acggatgtgg ttgtaaccgg aaacagaacc
     5221 ggagatggcg gtgactctac tgccggtgcg actttgcaag gcggttgggg cggtttcggc
     5281 ggaggaattg tagccagcgg tactgtcacc atgacgaatg ttgttattag caataacgtg
     5341 accggcaaag gcggcactgg agggtatgcg ggcggtggcg ggtatgcagg cggactgtac
     5401 ctgggacccg gccccgcgac tcttacgaac gtaactgtca gcgggaattt aacaggtgac
     5461 aatgggacga gtatcggtgg tggatcgtca ggcaatagcg gttatggggg cggtatctac
     5521 agtaattcaa cgcaactgac gctaaacaat gtaacgatct cgggaaatac aacgggcaac
     5581 tgcacaaact cgggcgcggg tcccggcgcc ggtctgttta tatactccgg tacggtaacg
     5641 atcgtcgatt catcgatcac tggcaatcgt acggggaacg caactgggtt ctcagggcag
     5701 gctgggtacg gcggcggcat cgccaacttc ggaaatctca ccatctcacg cagcaacatc
     5761 agcggtaaca ggaccggaga cagcgagtca gagtcgggca acggcggtgg tggtatttac
     5821 aacggcttca ttttgcgtgt gagcaatagc acgattagca acaatgtcgg gggctctggg
     5881 aattcggttg ccggtacggg cggtggcatt ctcgccggcg gaacagtatc gctaaccaac
     5941 tgcactatcg ccggaaactc ttcattcagt aacaatggtc ccggcgtctc gtttggcaat
     6001 aacacaaaca acgtcaggaa cacaatcatc gcaaacaacg gcccggtcgg tgtttccgac
     6061 atcaggggta atgctacctc gcaaggccac aatctaattg ggaaatcaga cggaagtaat
     6121 ggcttcgtaa atggaacaaa tggcgaccag gttggcacac tggccactcc tctcaatccc
     6181 cagcttgctt ctctcggcaa caatggtggg cccacccaaa cgcaggccct gctggcgacc
     6241 agtccggcca tcgatgcggg acagaattgc gtcgtcgacg cagcacattg cggtgattcg
     6301 aacattccgc aacttttgcg cgatcaacgg ggcttcaatc gtatagtcga cggacctgat
     6361 gcgaacacga caaccacggt cgatatcggt gcttatgaaa aacaagcggt gtttcccaac
     6421 ctgcctgacg ccagcaccaa cgaggacacg ccggcaatcg tcgcattcga tctgaacgac
     6481 attgcttctg ttacgtcagt aactgcgagc tcaagtgact cagccctggt gccgaacaac
     6541 cccgctaata tcagcgtggt tctggccaac tccacagcgg tcttaacctt taatccggct
     6601 tcgaatctag tcggtatgac gaacatcact gtgacggtta accggaccag cggcagcacg
     6661 aatgatattt tcgtgttgac ggtcgttccg gtgaacgatg cgccgtcatt tgccaaaggg
     6721 gcggaccagt ccgtcaacga gaatgatccg gcacagactg tgaacaactg ggcctcggcg
     6781 atatcggccg gaccggcaga tgaatccccg cagatcgtaa cgtttcaaat tgtcagcaac
     6841 agcaatgcgg gtttgttttc cgttgctccg gcggtcagtt cgaacggcac actcacttac
     6901 actccggcga ccggcgcgag cggtactgcc cagattgtca tccggctttc agacaacggc
     6961 accaccgcga acggtggaaa tgacacttcg gtaacccaga gtttcaatat caatattctg
     7021 gaaggtggaa acctgcattt cagtagtttc agttattacg tcagcgaaag tgccggcagc
     7081 gcgcttataa ctgtgtcgcg cagcggcggc tcggcgggtg aagcgcgagt gaattatgcg
     7141 accagcaacg ccggcgcgac cgccggtgag gactacgccg ctacttcagg cacgttgacc
     7201 ttcgccaatg gcgtcacgtc gcaaaccttc tcggtcccga tccttggcga cacgttcgat
     7261 gagcaagatt tcgaatcgat tgctttgacg ctctcaagtc cagccggcag cggtggcctc
     7321 ggctccccgt caacctctac gcttaacatc aatgatgacg atgcgcgtcc aaccctgagc
     7381 atcaatgacg tgcaggtaag cgagggcaat agcggaacca tcgacgccgt gtttaccgtc
     7441 acgctgacgg gacagacagc cttacaagtt acagtgggct tcgggacgtc taacaatacg
     7501 gcaacgttgt cagactatca gcccaccagc ggacagttga cgttcaatcc gggtgagaca
     7561 accaagacga tcacggttcc aattgtgggc gatacgctgg gcgagattaa cgaaactttc
     7621 ttcgtcaatt taaacttctc aaccaacgcg aacatcatca gatttagagg cacggccacc
     7681 attctagaca atgatacgtc agtccaattt aactcagcta catatttgcc caacgagagc
     7741 tttgtcagtg tgagctttac cgttactcgc actggcatta cgggcggctc gtcaacggta
     7801 aactacgcca ccagcgacag tgccggttct gcggcttgcg gcactgcaac tggtaatgcc
     7861 tctgcgaatt gcgactatac cggcgcgagt ggcacgctga gctttgcgcc cggagaaact
     7921 tcaaagactt tcaacgttcc ttttgtagac gacggatggc ttgagggtaa cgagagtttt
     7981 atgttgacgt tgagttcgcc taccggcgca accttgggat ctccggctac cgcaatcgtt
     8041 accatcgtcg ataacgattt ggctggcgct gtgcccgttc tcttcttgga gagcggcacc
     8101 agccgggccg gcgctctcaa ttccgtaaca tttgtgcgcg ggccgttctc ggtcgtggag
     8161 tcctcgaact ttagcgtcga taaacaaacc cgcctgatcc tctacacttc gaatctcaga
     8221 cttactcaag cggatcccgg ttatctatca gttcaggcat ctggagtgga tttgccgatt
     8281 gaaaaggtgg gaacggtatt tggcgtagct gggctggatg cttcctacat tgttgtgaag
     8341 ctgcctctcg aattaccgac cggtgacctg cagttaatcg tcagccttcg tggcactccg
     8401 agtaacgcgg gagtattgca gattgtgcct taggagcccg cgcgcgggat ttcagacaaa
     8461 aggtcggccc ggcgcccgcc gccttcatca aaaacgcgct tatcgcggaa gggccgcgtc
     8521 ctcgccttgg caaatcgatc aggcagctag ttttcccgtc ggcgcgtagt agtccaacag
     8581 cgcatccaac cggtcaaaat cgataggctt aatcagaaag tcatcgcagc cttctgcgat
     8641 cgcactggtg cgatacttct ccggatcctg gccggtaacg atcatgatcg gcaccgtctc
     8701 aagttttgga ttttgccgca gacggtg
//
LOCUS       DATDBY010000335         2210 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1023699, whole genome shotgun sequence.
ACCESSION   DATDBY010000335 DATDBY010000000
VERSION     DATDBY010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023699"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(338..835)
                     /locus_tag="VIT19_06200"
     CDS             complement(338..835)
                     /locus_tag="VIT19_06200"
                     /inference="COORDINATES: protein motif:HMM:NF033537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lasso peptide biosynthesis B2 protein"
                     /protein_id="HEY5838611.1"
                     /translation="MSTYPRIPPMILRALQLTTRDPARACLLARMAVWVVVLSVVARL
                     LPLSRALQIVSTEVRRKSTEVDPIQLSTAIDALLEANVFVFKPSCWKRATVLHRYLAL
                     AGLATTIRFGVRKDGDHELKGHAWLELDGKPILESSPPVYTVTYSFPSNEPFEIDLAV
                     LAESQ"
     gene            1066..1548
                     /locus_tag="VIT19_06205"
     CDS             1066..1548
                     /locus_tag="VIT19_06205"
                     /inference="COORDINATES: protein motif:HMM:NF012304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase H family protein"
                     /protein_id="HEY5838612.1"
                     /translation="MTIFCDGSSLGNGRAVARAAGVALLGFKGLWRAFGIYLGQATNQ
                     QAEIAAAALGLEALKEPCRVRLHTDSKYVVETMSGRFRRKANHDWWKRLDEAAERHQV
                     EWQWSQGHVGHVIQEAADKAARKIAALGHVEPAVLQAAVDKIGVIEPEEETGGDAELF
                     "
     gene            1824..>2210
                     /locus_tag="VIT19_06210"
     CDS             1824..>2210
                     /locus_tag="VIT19_06210"
                     /inference="COORDINATES: protein motif:HMM:NF026220.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YCF48-related protein"
                     /protein_id="HEY5838613.1"
                     /translation="MHGKSTKVISNCLIAIVCVLAGSHTVTRAQSADRGWEWQNPLPQ
                     GNAIAAIRFAKDQRHGWAVGSDGVILYTTDGGFSWTSQRTRIVSTLSGLHVFDRRRAI
                     AVGARGTVLRTTNGGRRWTQVPVPTKD"
BASE COUNT          480 a          633 c          640 g          457 t
ORIGIN      
        1 gtggccgaaa atcatcagcg aatagtgcgt gtagcgcacg acgccggcga gttcggtttc
       61 caagatttca tttagaagcg cgacgacggc tttcttgtcg aagtcctgtt ctgccatgtg
      121 tcctccgcga tgggttttga aactggtttg tcggcaataa gttagcacaa gtgcgcaaca
      181 tttgcggata agtggcgcgt gtgtttgtcg ccgctcgtct tcctctgtgt ctctgtgaaa
      241 ttctctgtga ctctgtggtg agtgttgtcg agaggtattt caccacaaag gcacagagca
      301 ctcacagaga cacggagaaa aatttacaac cgagacgcta ctggctttca gcaagcacgg
      361 ccaaatcaat ctcgaacggc tcgttcgagg ggaacgaata cgtaactgtg taaaccggcg
      421 gcgagctttc caggattggc tttccatcca attcgagcca cgcatgtcct ttcaattcgt
      481 ggtcgccatc ttttcttacg ccgaaacgaa tcgtcgttgc caagcccgcc agcgccaggt
      541 accggtgcag aacagtcgca cgtttccaac aactcggttt gaagacaaag acgtttgctt
      601 ccagcaacgc atcaatcgcc gttgagagtt gaattggatc gacctcggtc gatttccgcc
      661 ggacctctgt cgaaacgatt tgtagcgcgc gcgatagcgg caatagtctc gccaccactg
      721 agaggacgac gacccacacg gccatccgcg ccagcagaca ggctcgcgcc ggatctcgtg
      781 tcgtcaattg cagcgcccgc aaaatcatcg gcggtattct agggtacgtg ctcaccttcg
      841 actagcttcg gcatggcgga acaaactcgc gagctgcgaa gcagcttgtt gtcagcatca
      901 ataaaaagcg ttcacctcac ctcagacttt ttgggcaagc ccggtcgcta ccgctctcag
      961 ttctgacact tcacgccctc tccgacctca ctgccaaaaa ccgttccggc cgtgttaggc
     1021 tcgcgccgga tggaacctga gagcgatcga cgaccagcga aactcgtgac gatcttctgc
     1081 gacggctcaa gcctcggcaa tggccgtgct gtggcgcgcg cagcgggggt ggcgttgctc
     1141 ggcttcaaag gtctttggcg agcgtttgga atttacctcg gccaagccac caatcaacag
     1201 gccgagatcg ccgcggctgc gctgggcctg gaagctttga aagaaccttg ccgcgttcgt
     1261 ctgcacacgg attcgaaata cgtcgttgag acgatgagcg gccgctttcg ccgcaaagcg
     1321 aatcacgatt ggtggaagcg tctggatgaa gccgccgagc gtcatcaggt tgagtggcaa
     1381 tggtctcagg gtcacgtcgg ccatgtaatt caggaagcgg ccgacaaagc ggcccgcaag
     1441 atcgcggcgc tcggacacgt cgaacccgcc gtgttgcagg ctgcggtgga caagatcggc
     1501 gtcatcgagc cggaagagga aacggggggc gacgccgaac tgttttgaaa aaagagataa
     1561 gcaacacgac ggcctgcggc tttgccgccg caccatgcgg taagcctttg gcttaccgtc
     1621 gtagcttgat ttaaatcttc gccgaggctc agcctcggcg ataggatcgg cgggaccgca
     1681 ccggaaaggc cgagcctttc cgcaatgtgc tgcgccagag gcgcaagggc ccccaatccc
     1741 attgagtctc gctttccggc ctcagcaaac ctataatccc cttaaagatc cagacgcgac
     1801 ttcatcaaaa gcgaagcgag cacgtgcacg gcaaatcaac aaaagttatc tctaactgtc
     1861 tgatcgcgat cgtctgtgtg cttgctggat cgcatacggt gacgcgcgcc cagtccgctg
     1921 atcgtggatg ggagtggcag aacccactgc cgcagggcaa tgcgatcgca gcgatccgat
     1981 ttgccaaaga ccagcgtcac ggttgggcgg tcggatccga cggggtaatt ctctacacaa
     2041 ccgacggcgg gttttcgtgg accagccaac ggacacgcat tgtttcgacg ctgagcggac
     2101 tgcacgtttt cgatcgccgc cgggcaattg cggtcggcgc gcgcggcact gtgctgcgca
     2161 ccacgaacgg tggcaggcgt tggacgcagg ttccggtgcc tacgaaggac
//
LOCUS       DATDBY010000336         2178 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2058637, whole genome shotgun sequence.
ACCESSION   DATDBY010000336 DATDBY010000000
VERSION     DATDBY010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2058637"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..1083)
                     /locus_tag="VIT19_06215"
     CDS             complement(91..1083)
                     /locus_tag="VIT19_06215"
                     /inference="COORDINATES: protein motif:HMM:NF013328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HEY5838614.1"
                     /translation="MPELPDITIYLEALEKRILHARLQRFHLISPFLVRTAAPPIAAV
                     EGKEVADLRRLGKRICIGFEDGLWLVLHLMIAGRLHWKEPSAKAGAQFARPPKNTLAI
                     FYFENGQLSLTEAGTQRRASLHIVQGEEGLRGLDPGGVELFFRTASRPGSPRGQPAWG
                     GSSERVNDSTRGGFIDLSNFTRILQSENHTLKRALTDPRLFSGVGNAYSDEILWNARL
                     SPVKLTQKLSEEEVARLHRATRDTLLEWIERLREETGERFPEKVTAFRKDMATHGRYR
                     EPCPRCGAKIQRIRYASNETNYCPNCQTGGRLLADRALSRLLREDWPKKAEDIS"
     gene            1322..>2178
                     /locus_tag="VIT19_06220"
     CDS             1322..>2178
                     /locus_tag="VIT19_06220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838615.1"
                     /translation="MKFAKLFAALGGCLLLVTLLVLPQVMEAARARWAAQPVQGQGKN
                     VSVVASEHNDTSPPLREMPQHPVKFKEKKEANKNPKVIPHRHVDRADPVVQTSESGPG
                     APTVGMPGTSLNFDGVPFPGVACNCAPPDTNGEVGDTQYVQIVNEGYQVFNKTTGASQ
                     LGPSGIATLWNGFGGVCQNNGSGDPVVLYDQLAGRWIITQFAGVSVPTHECIAVSTTN
                     DATGSYHRYAFQLGTNFFDYPKLSVWPDAYYMSMNVFNSSATAYLGPQPFAFDRAKML
                     LGLPATFITT"
BASE COUNT          472 a          623 c          608 g          475 t
ORIGIN      
        1 gggcacgacg aaaccggaat tttcgcgcaa tccagccgta gttgtgttgc gataaggaga
       61 tcgttgagtg gtgaataact gaccgtcgat ctagctgatg tcttcagctt tcttcggcca
      121 atcttcgcgc agcaagcgcg aaagtgcgcg atccgccagt aaccgaccgc ctgtctgaca
      181 attcggacaa tagttcgtct cgttagaggc gtaccgaatg cgctgaatct tcgcgccgca
      241 gcgcggacag ggctcgcggt aacggccgtg cgttgccatg tctttgcgaa acgcagtgac
      301 tttttcgggg aagcgttcgc cggtttcttc gcgcaaccgc tcgatccatt ccaacagcgt
      361 gtcgcgcgtg gcgcggtgaa gccgcgcgac ttcttcttca gaaagtttct gtgtcagctt
      421 caccggcgaa agtcgcgcgt tccaaagaat ctcgtccgag taagcgttgc cgacgccgct
      481 gaagagtcgc ggatcggtga gcgcacgttt cagcgtgtgg ttttcagatt gaagaatgcg
      541 ggtgaagttt gagagatcga tgaagccgcc gcgggttgag tcattgaccc gctcgctact
      601 accaccccac gcgggctgcc cgcgcgggga ccccggtctg ctcgcggttc tgaagaacag
      661 ctcaacacca ccggggtcga gtccgcgcaa accttcctcg ccttgaacaa tgtgaagcga
      721 agcgcggcgt tgtgtcccgg cctcagtcaa agaaagttgg ccgttctcga agtaaaagat
      781 cgccagcgtg tttttcggcg gtctggcaaa ttgcgccccg gccttcgccg atggctcttt
      841 ccagtgcagc cgcccggcaa tcatcaaatg caggaccagc caaagaccat cttcgaatcc
      901 tatgcagatt cgcttgccta accttcgtaa atcagccact tcctttcctt ccacagccgc
      961 gatcggcggc gcggcagtcc gtactaggaa gggcgatatt aagtggaacc gctggagacg
     1021 ggcatggaga atccgttttt ccagggcttc gaggtaaatc gtgatgtccg gaagttcggg
     1081 cacgcaatgc gaagattaac tcggattgag cgtccgagaa aaaggccctt ttatcggcca
     1141 aacctaggtc aaacgccgcg acttaaaatg tcttgtaaca taattggcgc ggtgatacta
     1201 tcccgactcg taatttcttg cccttagctc agcaaaatga atttaccgca gtcgtcctgt
     1261 acttttaccc gagaggcgga cgaggttagc tgatgccatt ccctaactta ggaggagccg
     1321 aatgaaattc gccaaactgt ttgccgcatt gggcggctgt ttattgctcg tcactctatt
     1381 ggttttgcca caggtgatgg aagccgcacg cgctcgctgg gcggcacagc cggtacaagg
     1441 ccagggcaag aatgtcagtg tcgttgcctc agagcacaat gacacgtcgc cgccgctgcg
     1501 cgagatgccg cagcacccgg tgaagttcaa ggagaagaag gaagcgaaca agaatccgaa
     1561 ggtcatccca caccggcacg tcgaccgcgc ggaccccgtc gtccaaactt ccgaatccgg
     1621 tccgggtgcg cctacggtgg gaatgcccgg cacctcgctt aacttcgacg gcgttccgtt
     1681 tccaggcgta gcctgcaact gcgcaccgcc ggacacaaat ggtgaagtgg gcgacactca
     1741 atacgtccaa atcgtcaacg agggctatca ggttttcaac aaaacaacgg gagcctcgca
     1801 gttgggccca tcaggtatcg caactttgtg gaacggcttc ggaggagttt gccaaaacaa
     1861 cggcagcggc gatccggtcg tgctttatga tcaacttgcg ggtcgctgga tcatcactca
     1921 gtttgcgggc gtgagcgtcc cgacgcatga gtgcatcgcc gtttccacta ccaacgatgc
     1981 aaccggctcg tatcaccgct atgcatttca actcggcacg aactttttcg actatccgaa
     2041 gctgagcgtg tggcccgatg cctactacat gagcatgaac gtgttcaact cttccgcgac
     2101 cgcatacctt ggacctcagc cattcgcgtt tgatcgcgcg aagatgcttc tgggattgcc
     2161 cgcgactttc atcacaac
//
LOCUS       DATDBY010000337         5355 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_419884, whole genome shotgun sequence.
ACCESSION   DATDBY010000337 DATDBY010000000
VERSION     DATDBY010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5355
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419884"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..469
                     /locus_tag="VIT19_06225"
     CDS             <1..469
                     /locus_tag="VIT19_06225"
                     /inference="COORDINATES: protein motif:HMM:NF012436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEY5838616.1"
                     /translation="HMAEQDFDKKAVVALLNEILETELAGVVRYTHYSLMIFGHNRIP
                     IVSWLRGEANVCLAHANAAGELVTHLGEHPSLKIGALLESEQHSVQDILLESLEAEKT
                     GLALYKRLLDVVRDRSIFIEEYARKMIAEEEMHMGEVNKMLRKPGEIRRFKSE"
     gene            479..823
                     /locus_tag="VIT19_06230"
     CDS             479..823
                     /locus_tag="VIT19_06230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838617.1"
                     /translation="MPRPERTVESLRLLQDWSKWLISLETIVCISLWPKLTSTPAPPG
                     LMYAGWMMFWASIIVAAILLLCISLFVRRVDESGDRDIKIVWLIVGVQYACFLLGLAC
                     FALNLMLFWLGL"
     gene            851..1408
                     /locus_tag="VIT19_06235"
     CDS             851..1408
                     /locus_tag="VIT19_06235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838618.1"
                     /translation="MQRSRLVIALLLVACAGAIALNGRGALNPASAQSPNTSPGALQV
                     STLCAKTERVIFACVLRRPAKIVSVCASKDLTRDTGYVQYRFGSPAKIELEYPKDRTG
                     TQQKFEYTHYMRALVDLNEINFSVDGVDYSVVDDYNAEEKPAQSIEGITINWPGTSKK
                     EVRYSCRTKPKTDYTDLQAVLFEHN"
     gene            1545..2168
                     /locus_tag="VIT19_06240"
     CDS             1545..2168
                     /locus_tag="VIT19_06240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838619.1"
                     /translation="MAEESKDRFRVLKHPLFLMVVGSVIGSFLIPWVSHKTDRNRALR
                     EARLKKAVEIVNHNTETLSQLNALVTRLGIFHKDNIRLKPTPAKLDELQDQLTKDMNS
                     RYAEFEKTGWWWYRSLNDEAVILEIVPPGGSDKLRNDVNAYGDNISQTVAAFNDFWHK
                     CLSKEYDFEENGNVTQIQTKMYERLGQLATERVKLVNNLVQDFSPAQ"
     gene            complement(2152..2907)
                     /locus_tag="VIT19_06245"
     CDS             complement(2152..2907)
                     /locus_tag="VIT19_06245"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5838620.1"
                     /translation="MLPQLRLSQSSTPYSVGRLVTRPKTVFDLAVGPLTTAGNGVKRR
                     WLRERRRRKVGRAYDMALEIARVIPRGSEVLDVGCGNGYIAHHLSAMLGRAVRGIDVA
                     DSTDAPIDYRQYNGCEFPAPDSSFDAVVFAYVLHHARDAHGMLEEMKRVLRPGGVAII
                     YEDIPATAWDRFICWTHDLKWRKRTGACTFRNEDDWRELFTQFDFQVVNQRRLSRTRN
                     LTHPVARQFFEVGNSVQSPLASFADAAAFTAPD"
     gene            complement(3342..>5355)
                     /locus_tag="VIT19_06250"
     CDS             complement(3342..>5355)
                     /locus_tag="VIT19_06250"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HEY5838621.1"
                     /translation="ADEGMWTFNNVPRAEIKRRYGFDVTDEWLRKVQLASVRFNNGGS
                     GSFVSADGLVLTNYHIVESIVGEVSTADKDYAKEGFVARTRADEIKAPSLELNVLMSI
                     EDMTERVNGAVKAGVSDADAFAARRAEISKIEAESTQATGLRSDVVTLYQGAQYNLYR
                     YKKYTDVRLVFVPEFQAAFFGGDPDNFNFPRFNVDMALVRVYENDKPVNPPSYLKWSK
                     TGAKEGELVFVTGHPGSTSRLNTVAHLRQLSETSVPIIIRLLERREAMLKKYMTLGEE
                     QTRRAQNELNSIQNSLKVYRGQLAGLKGNTLMARKQADETALRSWAAANPDRKKNYGD
                     AWDAIAKAHQALPSYIRERRIFDQAGGFNTTTFGIARNLVRLAEENQKPNAERLPEFT
                     DARRASLELGLYSPAPIYDEFEKLKLADSLGFMIELLGADHALVKQIMNGKTPEARAA
                     ELIDGTKLKDVDYRKELVKGGKQAIDSSTDPMIVLARLIDPKAREMRKRFESEVTGVE
                     RTNYAKIARARFESEGNKVYPDATFTLRLSYGAVKGYLENGKRIAPFTTLGGLYDRSA
                     KFNQKFPYNLPPRWTEKKSAVNLATPFNFVSTDDIIGGNSGSPTINKNGEIVGLIFDG
                     NIQSLIGDFHYDETVNRAISVDVRAMQEILRKLFDANHIADELLKG"
BASE COUNT         1173 a         1526 c         1482 g         1174 t
ORIGIN      
        1 acacatggca gaacaggact tcgacaagaa agccgtcgtc gcgcttctaa atgaaatctt
       61 ggaaaccgaa ctcgccggcg tcgtgcgcta cacgcactat tcgctgatga ttttcggcca
      121 caaccgcatt ccgatcgtga gttggctgcg cggcgaagcc aacgtctgcc tggcacacgc
      181 gaatgcagcc ggcgagctgg tcacgcatct cggcgagcat ccttcactta agattggcgc
      241 tttgctcgag agcgagcagc attcggttca ggacattctg ctggagtctt tggaagctga
      301 gaagaccgga ctggccctct acaaacgttt gctcgatgtc gtgcgcgacc gttccatctt
      361 cattgaagaa tacgcgcgca aaatgatcgc cgaagaagaa atgcacatgg gcgaagtcaa
      421 caagatgctg cgcaagccgg gtgagatccg ccggttcaag tcggaataaa tttccctcat
      481 gccgagaccc gaacggactg ttgagtcact gagactgctt caggattgga gcaagtggct
      541 catcagtctc gagacgatag tctgcatcag cctttggcca aaactaacta gtacacccgc
      601 gccaccgggc ctgatgtatg cgggctggat gatgttttgg gcgtcgatca tcgtcgccgc
      661 aatccttctg ctgtgcatct cgctgttcgt gcggcgcgtg gacgagtcag gcgatcgcga
      721 cataaaaatc gtctggctca tagttggcgt gcagtacgca tgcttccttt tgggactcgc
      781 ttgctttgct ttgaacctga tgctcttttg gctcggtttg tgaaatgagt tggtgcggaa
      841 ggcccgctag atgcagagat caagattggt gatagcgctc ttgctggtcg cctgtgccgg
      901 agcgatcgcc ttaaatggcc gcggcgctct taaccctgcg tcggcgcagt ctccgaacac
      961 atcgccaggc gcgcttcaag tcagcacgct gtgcgcaaaa accgagcgcg tgatttttgc
     1021 ttgcgtgctg cgccggccgg cgaaaatcgt ttcggtgtgc gcttcaaaag acctgacgcg
     1081 agacacgggt tatgtgcagt acagatttgg ctcgcccgcg aagatcgaac tcgagtatcc
     1141 gaaagaccgc accggcactc agcagaagtt tgaatacacg cactacatgc gcgcactggt
     1201 cgatctcaat gaaattaact tctcggttga cggcgtagat tattcggtcg tggacgacta
     1261 caacgcggaa gagaaaccgg cccagagcat tgaaggcatc accatcaact ggccgggcac
     1321 gagcaagaaa gaagttcgct acagttgccg cacaaaaccg aagactgact acacggattt
     1381 gcaggccgtg ctgtttgagc acaactgatc atccgaagct cttgcatttc tccacatcat
     1441 cggcttagca tctgcggcct caaaacaggc tggtcccaga gcctgcgcca ttcgcggttt
     1501 cgtcgcgcgc cagcctgaac atccgaggaa aggatcgatg tgcaatggcg gaagaatcca
     1561 aggaccgatt tcgtgtgctc aaacacccgc tgtttctgat ggttgtcggg agtgttattg
     1621 gttcgtttct gatcccctgg gttagtcaca agacggatcg gaacagagcg ttgcgcgagg
     1681 caagactgaa aaaggcagtt gagatcgtaa accacaacac cgagacgtta agtcaactca
     1741 acgcgctcgt gactcgactc ggaatattcc ataaagacaa cattcggctg aagccgactc
     1801 cggctaagtt ggacgaattg caggaccaac tgaccaaaga catgaacagc cgctacgcgg
     1861 agttcgaaaa gaccgggtgg tggtggtaca gaagtctgaa tgacgaggcg gtaattctgg
     1921 agatcgtgcc gccaggcggt tcggacaagc tcagaaacga cgtgaatgcc tacggcgaca
     1981 acattagcca aacagtcgcc gccttcaatg atttctggca caaatgtctt tcgaaggaat
     2041 acgactttga agagaacggc aacgtcacgc aaattcagac caagatgtat gaacggctcg
     2101 ggcaattggc tactgagcgg gtcaagctcg tcaacaatct agttcaggat tttagtccgg
     2161 cgcagtgaaa gccgcagcgt cggcgaagga cgccaacggg ctctggacgc tattccctac
     2221 ctcaaaaaat tgacgcgcca ccggatgcgt tagattgcgc gtgcgcgaga gccggcgttg
     2281 attgaccacc tgaaaatcaa actgtgtgaa taattcgcgc cagtcgtcct cgttccgaaa
     2341 tgtgcacgcc cctgtgcgtt tgcgccattt cagatcgtgc gtccagcaga taaagcggtc
     2401 ccaggccgta gccggaatgt cttcgtagat gattgcgacg ccgcccggcc gcagcacgcg
     2461 cttcatttct tccaacatcc cgtgagcgtc ccgcgcgtga tgcagcacgt acgcgaacac
     2521 gaccgcgtca aaggaagagt ctggcgccgg aaactcgcag ccgttgtact gccgataatc
     2581 aatcggcgcg tccgttgaat cagcgacgtc gattcctctc accgctctgc ccagcatcgc
     2641 cgaaagatga tgcgcgatgt agccgttgcc gcaaccgacg tcgagcactt ccgatccacg
     2701 cggaatcacc cgcgcgatct ccaaagccat gtcgtacgcg cggccaacct ttcgtcgccg
     2761 gcgttcgcgc agccaacggc gcttcacgcc attaccggca gttgttaggg gaccgacggc
     2821 aagatcgaaa acggtttttg gtcgagtgac taaacgcccg acagagtagg gagtcgaaga
     2881 ttgcgagagt cttagctgcg gcaacatctc gccgaaggct cagcaaccgc aatgccggtt
     2941 acaaaccgtt cagtttttca gcggattcgt gaataaagaa ttatccggcg cgaggatttt
     3001 cggacttttg cctgcaagag atgcccgaca ggagtatggc gagtcgtggt gtcatgcatc
     3061 aggaaaaccg gaaccccaac gcgtcggggt agcgactgga tgaactgttg gccacagagc
     3121 tcttactcct ctcagctttg cacccaaggg caagaatagc gggggcaagc ccaccttcct
     3181 caccgcgagc tgattagagg gggatcgtga tcgcacctgt gaatggcttt caaggtgaag
     3241 caatcgacta agttcaggag tctcagggtc gggaaggcgg gcttgccccc gctctttcct
     3301 ggggtcgaac actttttgtg caaagcccac gcgacgaaat cctaaccctt caacaactca
     3361 tccgcgatgt ggttcgcgtc gaaaagcttc cttagaattt cctgcatcgc gcggacatcg
     3421 acggaaatcg cccggttaac cgtctcgtca taatggaagt cgccaatcag cgattggatg
     3481 ttgccgtcga aaatcaggcc gacgatttcg ccattcttat tgattgtcgg cgaacccgaa
     3541 ttgccgccga tgatgtcatc ggtcgagacg aaattgaacg gcgtcgcgag gttcacggcc
     3601 gacttctttt ccgtccaacg cggtggcagg ttgtaaggga acttctggtt gaacttcgca
     3661 gagcgatcgt acaaaccgcc cagcgtcgta aacggcgcaa tgcgtttgcc gttttccagg
     3721 tagcccttca cggcgccgta cgacagccgc aacgtgaaag tcgcgtcggg atagaccttg
     3781 ttgccttcac tctcaaaccg ggcgcgggcg atctttgcgt agttcgtgcg ttcgacgccg
     3841 gtcacttcgc tctcgaaccg cttgcgcatt tcgcgggcct tcggatcgat caaacgcgcc
     3901 aggacgatca tcggatcggt ggacgagtcg atcgcctgct tgccgccttt aacaagttcc
     3961 ttgcggtaat caacgtcctt cagtttcgtg ccgtcgatta actcggccgc ccgagcttcc
     4021 ggcgtcttgc cgttcatgat ttgtttgacg agcgcgtgat ctgcgccgag taactcgatc
     4081 atgaaaccga gtgagtcggc cagcttcagc ttttcaaact catcgtaaat cggcgcggga
     4141 gaatacagcc ccagttcgag cgaggcgcgg cgcgcgtcgg tgaattcggg cagacgctca
     4201 gcgttcggct tctggttctc ttcggccagc cttaccaggt tgcgcgcgat tccaaacgtg
     4261 gtggtattga agccacccgc ctgatcgaag atccgccgct cgcgaatgta actcggcagc
     4321 gcctgatgag ctttcgcaat tgcgtcccaa gcgtcgccgt agttcttctt ccggtccgga
     4381 ttcgctgcgg cccagctccg cagcgccgtc tcgtcagcct gcttgcgcgc catcagcgtg
     4441 ttccccttca agccggcgag ctggccccga tagaccttca aactattctg aatactgttg
     4501 agctcgtttt gcgcgcgcct cgtctgttcc tcgcccaacg tcatgtattt tttcagcatc
     4561 gcctcgcggc gttcgagcag gcggataatg atgggaacgc tggtctcgct cagttgtcgc
     4621 aggtgggcaa ctgtatttaa gcgcgacgtt gaaccgggat gaccggtgac gaaaaccagc
     4681 tcgccttctt tcgcgccggt ctttgaccat ttcaaatagc ttggcggatt aaccggcttg
     4741 tcattttcgt agacgcgcac cagcgccata tcgacattga agcgcggaaa attaaagttg
     4801 tcgggatcgc cgccaaagaa tgccgcttga aattcgggca caaacaccag acgcacgtcc
     4861 gtgtacttct tgtaccgata aagattgtat tgcgcgccct ggtaaagcgt gacgacgtcg
     4921 gatcgcagtc cggtcgcctg cgtcgattca gcttcgatct tcgaaatctc tgcgcgtcgc
     4981 gccgcgaagg catcggcatc cgagacgccg gcctttaccg ccccattcac gcgctctgtc
     5041 atatcttcaa tcgacatcag cacgttcagc tcaaggctcg gcgccttgat ctcatcggcg
     5101 cgggtgcgcg cgacgaaccc ttctttggca tagtctttat ctgccgtact gacttcgccg
     5161 acaatgcttt cgacgatgtg atagttcgtc agcaccaggc cgtccgccga aacaaacgaa
     5221 cctgagccgc cgttgttaaa gcgcaccgac gcgagctgca ccttgcgcag ccactcgtcg
     5281 gttacatcga acccgtaccg tcgtttgatc tccgcgcgcg gcacgttatt gaaggtccac
     5341 atgccctcgt ccgcg
//
LOCUS       DATDBY010000338         2142 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1287400, whole genome shotgun sequence.
ACCESSION   DATDBY010000338 DATDBY010000000
VERSION     DATDBY010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2142
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1287400"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1778)
                     /locus_tag="VIT19_06255"
     CDS             complement(<1..1778)
                     /locus_tag="VIT19_06255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838622.1"
                     /translation="MLRQLLAPNSKKFQNHPRVRAASTLFGIGITVAFAVAICLVVAL
                     APSASLRVVHADTPTVLHFHGNGHDSGGSPPAPCTGDGRADLLNCDGPFLTASGTLDT
                     AQAASWVIANPALDGTGGRTIYDPSWIWNSGPVRLGGEMTVDFWASCGACGGGLGNAD
                     WTIRVWADGVMAYEEVVRATPDLPNVPKLLSAKIFLPEVIAAQNIVLHVDPVYIDSQN
                     NTKIYYDSQSACPGTLPGTQGPCDSKVTMPVLAPGEPVPTPTPNAAGVTYLKGGINFS
                     PNVPLHAPATVRDGEPSLRVDKYGNAYVAGIRGVPAGCDLWYFDLRPTVNGQPNPMYD
                     PYMRNPLYRGQPDAFTGEAEPSLLADGGGDVDLAVTFPASATEDPNAPPTLAFTSLTA
                     ANISVAKSTDRGITFQKNPAGNITGGIPGDDRQWFEAVGSNNVYIFYRTLAPAVSMIQ
                     RSTDGGFTFGPARTAGPIGQAGYIDVHKATGTVYISGSSGQVCVGTPATPADEPLTYT
                     CKPAGPANGANLFFVVKVADDGTPNGTLYVNYSDGTNIFLKSSTDKGDTWSAPIQINN
                     GPEVTKNLFPWIETGSVPGSVGIVWYG"
     gene            complement(1809..>2142)
                     /locus_tag="VIT19_06260"
     CDS             complement(1809..>2142)
                     /locus_tag="VIT19_06260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838623.1"
                     /translation="NKIGRQQTAERMKHEVWEVKDSRISHVGIRFDSKTHVVRWVTAI
                     ARADAKHRLRYSDLGDLSQAQHKTDGTNHTYIWRVPARGQRLGYVFEALGSDPQYLTS
                     YRLLRTFE"
BASE COUNT          422 a          607 c          654 g          459 t
ORIGIN      
        1 ccgtaccaga cgatgccgac tgagcccggg acggatccgg tttcaatcca cgggaacagg
       61 tttttcgtca cctctggccc gttgttgatt tgaattggcg cactccatgt gtcgcccttg
      121 tccgtcgagg acttaagaaa aatgttagtg ccgtcagagt agttgacgta gagcgtgccg
      181 tttggcgtgc cgtcatcagc caccttgacc acgaagaaga ggttggcccc gttagctggt
      241 cccgccggtt tgcaggtata cgtcagaggt tcgtctgccg gcgtggcagg cgtgccgacg
      301 cagacctggc ccgacgagcc gctgatgtag acggtaccgg tggccttgtg cacgtcaatg
      361 taaccggcct gtccgattgg accagctgtg cgcgccggac caaaggtgaa tccgccatcg
      421 gtagaacgct gaatcatcga aacggctggc gcgagggtgc ggtagaaaat gtaaacgtta
      481 tttgagccta cggcctcaaa ccattggcgg tcgtcgccgg gtataccacc cgtgatattg
      541 cctgccgggt tcttctgaaa agtaatgccg cgatccgttg acttggcgac tgagatattc
      601 gccgcagtca aactcgtgaa cgccagcgtg ggcggcgcat tgggatcttc cgtggcgctt
      661 gccggaaatg tgactgccag atcaacgtcc ccgcccccgt ccgcgagcaa cgaaggttcg
      721 gcttcgccag tgaaagcgtc gggctggccg cggtaaagcg ggttccgcat gtaaggatcg
      781 tacatggggt tgggttggcc gtttacggtc ggtcgcagat cgaaatacca gaggtcgcaa
      841 ccggcgggca caccgcgaat accagcgacg taagcgttgc cgtatttatc aacgcgcaac
      901 gaaggctcgc cgtcgcgaac tgtggcaggt gcgtgcagcg gcacattcgg actgaagttg
      961 atgccccctt ttagatacgt tacgcccgct gcgtttggtg ttggcgttgg caccggttca
     1021 cccggcgcaa gcactggcat ggtgaccttg gagtcgcagg gaccctgtgt gccgggaagc
     1081 gtgccggggc aggccgactg cgagtcgtaa tagatttttg tgttgttctg cgagtcgatg
     1141 taaacaggat cgacgtggag cacaatgttc tgcgctgcaa ttacttcggg caggaatatt
     1201 ttggcggaaa gtagcttggg aacattcgga aggtccggag tggcccttac cacttcctca
     1261 taggccatga ctccatccgc ccaaacgcgg atggtccagt cagcattgcc caggcctccg
     1321 ccgcatgcgc cgcacgaagc ccaaaagtcc acggtcatct cgccgccgag ccggaccggg
     1381 cccgagttcc aaatccagct tgggtcgtaa atcgtgcggc cgccagtgcc gtccagcgca
     1441 ggattggcaa taacccagct cgccgcctga gccgtatcca gagttccgct agccgtcaaa
     1501 aatgggccat cgcagttaag aagatctgct cggccatcgc cggtgcaggg tgccggcgga
     1561 gagccgccag aatcgtgacc gttgccatgg aagtgcaaga cggtcggcgt gtccgcgtgg
     1621 accaccctta gcgacgctga aggcgccagc gcaacgacca ggcagatcgc caccgcaaag
     1681 gccactgtga ttccgattcc gaacaacgtt gaagcagcgc gtactcttgg gtggttttgg
     1741 aatttctttg aattcggcgc cagaagttgt cgcaacattt ttggatctcc catggaaaat
     1801 cgatgtgact attcaaaagt gcggagcagg cggtaggaag tcaggtattg cgggtcactt
     1861 ccgagcgcct caaacacgta tcccaaacgc tggccgcgag ccggcacgcg ccagatgtag
     1921 gtatggttcg ttccgtcggt tttatgttgt gcctggctga ggtcgcccag gtcgctgtat
     1981 cgcagacgat gtttcgcatc cgcccgcgca attgcggtga cccagcgcac gacgtgtgtc
     2041 ttgctgtcga accttatgcc gacatgagag atgcggctgt ccttcacctc ccacacttca
     2101 tgtttcattc tctcggctgt ctgctggcga ccgatcttgt tc
//
LOCUS       DATDBY010000339         4986 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2924616, whole genome shotgun sequence.
ACCESSION   DATDBY010000339 DATDBY010000000
VERSION     DATDBY010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4986
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2924616"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..273)
                     /locus_tag="VIT19_06265"
     CDS             complement(<1..273)
                     /locus_tag="VIT19_06265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838624.1"
                     /translation="MRNQIDIDKIGSATSLLNLARTVTIAPSVGAARAGDVVVVRALT
                     DNATYNMLELPTGRLAKVNPGDVVAGVLGRRRALKGFVGDVPETVKA"
     gene            complement(372..1574)
                     /locus_tag="VIT19_06270"
     CDS             complement(372..1574)
                     /locus_tag="VIT19_06270"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF001770.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEY5838625.1"
                     /translation="MTSKTINKIVLAYSGGLDTSVMLHWLKEKYQCEIVCYCADVGQG
                     AEMDGLEEKAKATGASKLYIEDLREEFVRDYVWTSVKANAVYEGVYLMGTSLARPVIA
                     KRQIEIARLENADAVAHGATGKGNDQVRFELTYYALQPDIKVIAPWREWEFGGRTDLI
                     AYAESFGIPVTATIDKPYSTDANLMHVSYEGGILEDPWAEPPENIFQMTVSPERARDE
                     AEYIEIGFEKGEPVSVDGEQLDPVSLLSKLNEIGGAHGIGRVDLVENRFVGMKSRGVY
                     ETPGVTILHAAHRALESITMDREVMHLRDSFGVKFAENVYYGFWFAPEFDLMRKMIDE
                     TQVSVTGDVRLKLYRGNVIVAGRRSPNSLYDERIATFEADTVYNQRDAEGFIKLNALR
                     LRLGRSDV"
     gene            complement(1624..2037)
                     /locus_tag="VIT19_06275"
     CDS             complement(1624..2037)
                     /locus_tag="VIT19_06275"
                     /inference="COORDINATES: protein motif:HMM:NF014864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838626.1"
                     /translation="MIKRERQKRILNLIRAKRIGTQEELRAELERSGVPATQSSVSRD
                     LDDLGVVKHHGFYALPQANGDAARGLVGLDIAGDVLVIAKCLPGRASAVAVEIDDAAM
                     VEIVGTLAGEDTIFIATHDQKAQRTVMKKIWEMFG"
     gene            2120..3508
                     /gene="argH"
                     /locus_tag="VIT19_06280"
     CDS             2120..3508
                     /gene="argH"
                     /locus_tag="VIT19_06280"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEY5838627.1"
                     /translation="MHDGQSQKLWGGRFTGQADRGFAEFNQSFSFDRRLFQADIHASV
                     AHCEGLFSAGVLTAAEAEQIKSALNQIAEAGKTNPNYFNELPSEDVHSFVEARLVQMI
                     GDTGRKLHTGRSRNDQVATDLRLWLRDEIDRLQDLLRDAQLALLDFAEANQEVVLPGY
                     THLQRAQPILLAHWCLAYFEMLSRDRARLTDVRKRVNVMPLGSAALAGTSYAIDREAV
                     ARSLGFDSVSRNSLDAVSDRDFVIEFVSAASLVMVHLSRLAEDVILYTTTEFGFFELG
                     DAVATGSSLMPQKKNPDSMELVRGKAGRVFGHLTSLLTTMKGLPLAYNKDMQEDKEAL
                     FDTVDTVSACLAVTATVLRNMTVNGLRAREAATHGYLNATELADYLVGKGLPFREAHE
                     TAGRMVVHAMTRGAELDQLTLDEMKSFAPAIEDDVFGSLSLERTLATKAQIGGSAPES
                     VARELQKAKLRL"
     gene            3624..4400
                     /locus_tag="VIT19_06285"
     CDS             3624..4400
                     /locus_tag="VIT19_06285"
                     /inference="COORDINATES: protein motif:HMM:NF014970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MvaI/BcnI family restriction endonuclease"
                     /protein_id="HEY5838628.1"
                     /translation="MRHRSCYKHFAATRLKGRQDAGVPHARMRALHNITVFFITTQTL
                     DRKEAIRRLNLIVGKDLRAMADEYKIAVWKNGRKNKGWAGLVLERYLGLPQNSRQAPD
                     FGTWDLKLVALNYARDGSLRVKESMAITMLEPTEMLASKFEDSHLYDKLRRLLAVGRI
                     YESAEEKRSILHSAAEFDLDNPKIREQVVADYETIRAQIRTGGIESVTGDLGKLVQAR
                     TKGPGHGSTSRAFYARPVFVAHILNLQKLARMPRVFADAV"
     gene            4748..>4986
                     /locus_tag="VIT19_06290"
     CDS             4748..>4986
                     /locus_tag="VIT19_06290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838629.1"
                     /translation="MDADERFTGRGVTMAFLDSGFYPHRDLTEPRKRIVAYHSLFATD
                     GDDSSLHTADVASWHGMMTSVVAAGSGALSDGVYRG"
BASE COUNT         1087 a         1473 c         1363 g         1063 t
ORIGIN      
        1 ggctttcacc gtctcaggca catctccgac gaaccctttc agcgcgcgac ggcgtcccag
       61 cacgccggca acgacgtctc cgggattaac cttcgctaac ctgccggtcg gcaactcgag
      121 catgttgtac gtcgcattgt cagtgagcgc gcgcaccacg actacatcgc cggctcgcgc
      181 cgcaccaacc gacggagcga tcgtcaccgt ccgcgccaaa ttgagcagcg atgtcgccga
      241 tccgatcttg tctatatcga tttggtttct catttggaaa tctcaacttc cgagtttaga
      301 ggggcgtcgg ccgccgaatt ctcaatggcc gcgccacggc gggcaacgcc cgcctctaaa
      361 cgtctgaacg cctaaacgtc tgaacgcccc agtcgcaagc gcagcgcatt cagcttgatg
      421 aatccttcgg catcgcgctg gttgtaaacc gtgtccgctt cgaacgtcgc aatgcgctcg
      481 tcgtaaagcg aattcggcga gcggcggccg gcgacaatta cgtttccgcg atacagcttc
      541 agccgcacgt cacccgttac ggaaacttgc gtttcgtcga tcatcttgcg catcaagtcg
      601 aattcgggcg caaaccaaaa accgtaatag acgttttcgg cgaacttcac tccgaacgag
      661 tcgcgcaagt gcatcacctc tcgatccatc gtgatggatt ccaaagcgcg atgcgcggcg
      721 tgcaagatcg tcacgcccgg agtttcataa acgccgcgtg acttcatgcc aacgaaacga
      781 ttctcgacca gatcgacgcg gcctatcccg tgcgcgccgc cgatctcatt cagctttgaa
      841 agcagcgaaa cgggatccaa ctgttcgcca tccaccgaga ccggctcacc tttctcaaag
      901 ccaatttcaa tgtactcggc ttcatctctg gcgcgttcgg gcgacaccgt catctgaaaa
      961 atgttctcgg gcggttcggc ccaggggtct tcaagaatcc cgccttcata ggaaacatgc
     1021 atcaagttcg catcggtcga gtaaggctta tcaatcgtcg ccgtcacggg aattccaaag
     1081 ctttcggcgt aagcaatcaa atctgtgcga ccgccaaact cccactcgcg ccagggcgcg
     1141 atgaccttga tatcaggctg caaagcgtag taagtgagtt cgaaccgcac ctgatcgttt
     1201 cccttcccgg tagcgccgtg agcgacagca tcggcatttt ccagccgggc gatctcaatc
     1261 tgtcgcttcg cgatcacggg tcgagccaac gaagtaccca tcagatacac gccttcatag
     1321 acggcgttcg ccttgacgga tgtccacacg taatcgcgga cgaactcttc tcgcaggtcc
     1381 tcgatgtaca acttcgacgc gccggtcgcc ttcgccttct cttccagacc gtccatctca
     1441 gcgccctgac caacatcggc gcagtagcag acgatctcgc actgatactt ctctttcagc
     1501 cagtgcagca tgaccgacgt gtcgagcccg cccgagtaag ccagaacgat cttgttgatt
     1561 gttttgctag tcatcttctt cgtgctgtca gtcgtcagtg gtcagttgca actggcaacg
     1621 gacttaccca aacatctccc aaatcttttt catgactgtg cgctgtgctt tctgatcgtg
     1681 tgtcgcaatg aagattgtgt cttcaccggc gagcgtgccg acgatctcca ccatcgcggc
     1741 gtcgtcaatc tcaaccgcga ccgcggaagc ccggccgggc aaacacttcg caatcaccag
     1801 cacgtcaccc gctatgtcca gaccgactaa cccgcgcgcc gcgtcaccat tcgcctgtgg
     1861 cagcgcataa aagccgtgat gcttgacgac gcccagatca tccaaatcgc gcgagacgct
     1921 ggactgggtg gccggcacgc ccgaccgctc gagctcagcg cgaagttcct cctgcgtacc
     1981 aatgcgcttc gcccgaataa gatttagaat gcgcttctgt cgttctcgct ttatcatcgc
     2041 gaagtcgccg gctcttcaga cgcctgctga tgcagaatag ttgcatttta tccgcatagc
     2101 tgcataaact acagcaatta tgcacgatgg tcaatcgcag aaactgtggg gaggccgctt
     2161 caccgggcaa gcggatcgcg gatttgccga attcaatcag tcgttttcgt tcgaccgccg
     2221 gctatttcaa gctgacatcc acgccagcgt tgcgcactgc gaaggcctat tcagcgcggg
     2281 agtcctgaca gccgctgaag ccgaacagat caaatcggct ctcaaccaaa tagccgaagc
     2341 cgggaaaacg aatcccaact atttcaacga gctaccgtcg gaagatgtgc attcgtttgt
     2401 tgaagctcgg ctggtgcaga tgattggcga caccggccgc aagctgcaca cgggccgcag
     2461 ccggaacgat caggttgcca ctgatctgcg tctctggctg cgcgacgaaa ttgatcgtct
     2521 gcaagattta ctgcgtgacg ctcagctggc tctgcttgat ttcgcggaag ccaatcaaga
     2581 ggtcgtactt cccggctaca ctcatctgca acgagcccag ccgattctgt tggcgcattg
     2641 gtgtctcgct tattttgaaa tgttgtcgcg cgatcgcgcc cggcttaccg acgttcgtaa
     2701 acgagttaat gtgatgccgc tcggctccgc cgccctggcc ggaacttctt atgcgatcga
     2761 tcgcgaagcc gtggcgcgct cgcttggatt cgactcagtt tcacggaaca gtctggatgc
     2821 ggtcagcgat cgtgacttcg tgattgaatt tgtcagcgcg gcgtcgctgg tcatggtgca
     2881 tctctcgcgc ctggccgaag acgtgattct ctacacaacg acggaatttg gtttcttcga
     2941 attgggcgat gcggtcgcca cgggttcaag cctgatgccg caaaagaaaa atccggattc
     3001 gatggaactg gtgcgcggaa aagcggggcg tgtctttggc catctcacct ctttgttgac
     3061 gacgatgaaa ggtttaccgc tcgcctataa caaagacatg caggaagaca aagaagcgct
     3121 gttcgacaca gttgatacgg taagcgcctg cctggcggta accgcgaccg tgctgcgaaa
     3181 catgacagtg aacgggttgc gggcacgcga agcggcgacg catggttacc tcaatgcaac
     3241 tgagttggcg gattatctcg tgggcaaggg cttgccgttt cgcgaggcgc atgaaaccgc
     3301 cggacgaatg gtggtgcacg cgatgacgcg cggcgcagag ttggatcaac tgacgctcga
     3361 tgaaatgaaa tccttcgccc ctgcgatcga ggatgacgtc ttcgggtcgc tttcgcttga
     3421 gagaacgctc gctaccaaag cgcaaattgg tggatctgcg cctgaaagcg tggcgagaga
     3481 attacaaaag gcgaagttac ggttgtaggc tggccgccgt ccgacagcgc cgttaggcgc
     3541 ggaatattta tagaaccaaa agcaatcccc ttgatggcgc gagatgaaat ggcgacggcc
     3601 atttcatctc gcgttactga ttcttgagac ataggtcgtg ctataaacat ttcgccgcta
     3661 cgcggctgaa aggccggcag gatgccggcg taccgcacgc aaggatgcgt gcgctccaca
     3721 acatcacagt gtttttcatc acgactcaaa cactcgatcg gaaagaagcc atccgccggt
     3781 tgaacctcat tgtcggcaag gatctgcgcg ccatggccga cgagtacaag attgcggtct
     3841 ggaagaatgg acggaagaac aaaggatggg ccggtttggt tctcgaacgc tacctcgggc
     3901 tgccgcaaaa ctcgcgacag gcgccggact ttggcacatg ggatttgaaa ctggtcgcac
     3961 tgaactacgc gcgtgacggc tcgcttcgcg tcaaagaatc gatggccatc accatgctcg
     4021 agccgaccga aatgcttgcc agcaagtttg aagacagcca tctctacgat aagttgcggc
     4081 ggctgctggc agtcgggcga atttacgaaa gcgcggaaga aaagcgctcg atcctgcact
     4141 cggcggctga gttcgatctc gataatccta agattcgtga acaagtcgtg gcagattacg
     4201 aaacgattcg tgcacaaatt cggacaggcg gaattgagtc ggtcaccgga gacctgggta
     4261 agctggtgca ggcgcgtacg aaaggccccg gccatggcag cacttcgcga gccttctacg
     4321 cccggccggt tttcgtcgcg cacattctga atttgcaaaa gctggcgcga atgcccagag
     4381 tgtttgcgga cgctgtttga ctggagcgca agcgtctcgc ttgcggcgtg cggccgcgtt
     4441 ctccgcagcg tgcacgcgag acgcttgcgc tccagtcttc aacctaccaa tgaccgaaac
     4501 gggatcatta ctggagcagg cggaactcgc gaaaacctgt tccctctgcg accggatggc
     4561 ccagggcccg attctttcag tgagtgccct gcctgaaaac atccgctcga tccttcaatc
     4621 gaacgcgaaa aatgccgaga cgatctgcgc gcgctgtatt gaactgttca cgcgagcaca
     4681 acggtagatc gagtcacatc agacggtctt cgaacaaaac gctttcgttc tgccgacacc
     4741 gctgcgcatg gatgccgacg aacggttcac cgggcgcggc gttacgatgg catttctcga
     4801 ctcgggtttt tacccccatc gcgacctgac tgaaccacga aagcgaatcg tcgcttacca
     4861 tagccttttc gccaccgatg gcgacgactc ttcactgcac acggccgatg ttgcaagctg
     4921 gcacggcatg atgacctcag tagttgctgc cggcagcggc gcgctttcgg acggcgttta
     4981 ccgagg
//
LOCUS       DATDBY010000340         3190 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1518580, whole genome shotgun sequence.
ACCESSION   DATDBY010000340 DATDBY010000000
VERSION     DATDBY010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3190
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1518580"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1517)
                     /locus_tag="VIT19_06295"
     CDS             complement(<1..1517)
                     /locus_tag="VIT19_06295"
                     /inference="COORDINATES: protein motif:HMM:NF015237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HEY5838630.1"
                     /translation="MSDEAPVGKIPSLFRNYISFVGAAIAIASLASVFLLVLMEITAH
                     QENPYLGILTYVVFPSFLVFGLAIIALGMLIERRRRRRASPDEILAYPRLDLNDARAR
                     RAFFTFLIVTFLFISASAFGSYKAYEHSESVAFCGTTCHVPMKPEYVAYLASPHARVR
                     CVDCHVGPGAEWYVRSKFSGAYQLYSVAFNKFPRPITTPVHNLRPAQETCEQCHWPEK
                     FFGAQLKVFNRYAYDEKNTHRQFRMLLNVGGGSPTTGQVTGIHWHMNIANKIDYISTD
                     KQHQVIPWVRIQDQQGNVTEYYDRTRPLTPEQIAAATKQRMDCVDCHNRPAHIYQPPD
                     LSVDQSFAARKLDPTLPYLKREAIALLTKNYQTEDEALKAISAGLADFYRLNYPDLYA
                     GKRDLITNAITELQRIFSTYTFPEMKVDWKTHPNNIGHLYSSGCFRCHDGEHVSNTGK
                     VVSSDCNICHSVLYDSARLPEKNARTGPFQHPIDLGGLADRKCDVCHKPNEPFKHP"
     gene            complement(1514..>3190)
                     /locus_tag="VIT19_06300"
     CDS             complement(1514..>3190)
                     /locus_tag="VIT19_06300"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEY5838631.1"
                     /translation="GSKAASCVDCHARNRDLSTMLPASDPRSTINRANIAETCGRCHA
                     DKSVMQGSGISDRPSLSYRESVHAKAIAGGNLSAAVCTDCHNGHDILPASNAQSSIAK
                     ANIPNTCGKCHSAESNQFVQSVHGVALARGVSRSPNCTDCHGIHKIETPVENDTNGGT
                     SPTVAVGTQSCANCHEGVMLSSEFGVAGERVKSYRDSYHGLASQFGSKVVANCASCHG
                     VHNIFPSTDVRSMIHPVNLARTCGQCHVGAGENFAKGKIHLTSALVSDDATERDMAVR
                     GTRIVRWIYLPLILLTIGGMAFHNVLVWRKKVVARRREHRPIVRLTLNQRLQHWLLLT
                     SFLALVLSGFALQYPDSVLAWMLGNSESLRRVIHRVAAVVMLVAGVYHVAYLAFSKEG
                     RSWLKDMLPKIKDVGDVLGNFAYYLGARPTKPKIARFGYAEKAEYWAVVWGTIIMGLT
                     GLMIWFKISVFGFLPRWWIDIGLAIHFYEAVLATLAIIVWHFYHVIFDPDVYPVNWAV
                     VDGRVSEEFYKEEHELDYERLQQPSVTAENNQKAESVSAQVESNDEEKNK"
BASE COUNT          706 a          857 c          914 g          713 t
ORIGIN      
        1 gggtgcttga agggctcatt aggtttgtgg catacatcgc acttgcgatc agctaaacca
       61 cccaggtcga tcggatgttg gaatggtccg gtccgcgcgt ttttttcagg cagtcgcgca
      121 gaatcgtaga gtactgagtg acagatattg cagtcgctgc tcacgacctt gcccgtgttg
      181 ctcacgtgct cgccatcgtg acagcgaaaa cagccggaag agtaaagatg gccaatgttg
      241 tttggatggg tcttccagtc gaccttcatt tcagggaaag tataggtact aaagatcctt
      301 tgcagctcag taatcgcgtt cgttattaag tctctcttgc cggcgtagag atctggataa
      361 ttaagccgat agaaatcagc caagccagcg ctaatcgctt ttagcgcttc atcctccgtc
      421 tggtagtttt tggttagcag ggcaatggcc tcacgcttca gataaggtag cgtcggatcg
      481 agctttcgcg ccgcaaacga ttgatcgact gagaggtcgg gtggttgata gatgtgcgca
      541 ggccgattgt ggcaatcgac gcagtccatc cgctgtttag ttgcggccgc aatctgttcc
      601 ggcgtcagcg gccgagtacg gtcatagtat tcagtgacgt tgccttgctg atcttgaatt
      661 cgcacccagg gaattacctg gtgttgctta tcagttgaga tgtagtcaat cttgttggca
      721 atgttcatgt gccaatgaat gccggtgacc tggccggtcg tcggactgcc gccccctacg
      781 ttgagtagca tgcgaaactg gcggtgcgtg ttcttttcgt cgtaggcgta acgattgaag
      841 actttgagtt gagcgccaaa gaacttctcc ggccaatggc attgttcgca agtctcctgc
      901 gccggtctca gattgtgcac tggtgtggta atcggccgcg ggaacttatt gaacgcgacc
      961 gaatagagtt gataagcccc tgaaaatttt gagcgcacgt accattcggc gcccgggccg
     1021 acgtgacagt ccacgcaccg cacccgggca tgcggcgagg ccaggtaagc gacgtattcg
     1081 ggcttcatcg gcacgtgaca agtggtgccg cagaaggcca cggactcact gtgctcgtaa
     1141 gccttgtaac tgccgaaagc actggccgaa ataaagagga aggtgactat caggaaagta
     1201 aagaaagctc ttcgcgcgcg cgcatcgttt aaatccaggc gtggatacgc caatatttca
     1261 tcaggcgagg cgcgtcttcg ccggcgacgt tcaatcagca tcccgagcgc gattatggcc
     1321 aggccgaaca cgaggaatga agggaaaaca acgtaagtaa ggatgcccag gtaagggttc
     1381 tcctgatggg cagtaatttc catcaggacg agaagaaaca cactggccag gctggcgatg
     1441 gcaatggcgg cgccgacaaa acttatgtag ttgcgaaaca gactgggaat cttgccgact
     1501 ggcgcctcgt cactcattta ttcttttcct catcgttcga ttcaacctgg gccgatacgg
     1561 attcggcttt ttgattattc tcggctgtaa ctgagggttg ctgaagacgt tcataatcca
     1621 gctcgtgttc ctctttgtag aactcttcgg aaacacgacc gtcaaccacc gcccagttaa
     1681 ctggatatac atccgggtcg aagatcacgt ggtagaaatg ccagacgatg atggcgagcg
     1741 ttgccaatac cgcttcgtaa aagtgaatcg ccaggccgat gtcgatccac cagcgcggca
     1801 aaaaaccgaa gacactgatc ttgaaccaga tcataagtcc cgtcagaccc atgatgatgg
     1861 tcccccaaac gacggcccag tattccgctt tctcagcgta gccgaagcgg gcgatcttcg
     1921 gtttggttgg gcgggcgccg aggtagtacg caaagtttcc cagcacgtcg ccaacatctt
     1981 tgatcttggg caacatgtct ttgagccaac tgcggccctc tttggaaaag gcgagatacg
     2041 cgacgtgata gacgccggcg acgagcatca ccaccgccgc gacccgatga attacccggc
     2101 gcaaggactc gctgttaccg agcatccatg ccagaactga atccgggtat tgaagcgcga
     2161 acccgcttaa cacgagcgcg aggaaactgg tgagcagcag ccagtgttgc agtcgctgat
     2221 tcagggtaag ccgaactatc gggcgatgtt cgcggcggcg cgccacaacc tttttccgcc
     2281 agacgagcac gttgtgaaac gccattcctc cgatagtcag gagaatcagc ggcagataga
     2341 tccagcgcac gatcctcgtg ccccgaacag ccatgtcacg ctcagtggcg tcatcggaca
     2401 cgagtgcgga ggtcaaatga atcttgccct tggcaaagtt ctcgccggca ccgacgtgac
     2461 attggccaca ggtgcgggcg agattcaccg ggtgaatcat tgagcggaca tcggtcgaag
     2521 ggaaaatgtt gtggaccccg tggcaactcg cgcagttcgc aaccactttc gagccgaatt
     2581 gcgacgctaa accgtgatag ctgtcgcgat agctcttcac gcgctcgccg gccacgccga
     2641 attcgctcga aagcatcacg ccttcgtgac agttggcgca gctttgcgtg ccgaccgcaa
     2701 cggtgggtga cgtgcccccg ttagtgtcgt tttcaacagg cgtttctatt ttgtgaatgc
     2761 cgtgacagtc cgtgcagttc ggagagcgtg agacgccacg cgcgagagca accccgtgga
     2821 cgctctgcac aaattgattg ctttccgcgc tgtggcactt gccgcacgta ttcggaatgt
     2881 tagctttggc gatcgacgat tgcgcgttcg aggccggcaa gatgtcgtga ccattgtgac
     2941 aatccgtgca gaccgcggcg ctcagatttc cgcccgcgat tgctttggcg tgcacactct
     3001 cgcgatacga gagactcgga cgatcactga tgccgctacc ctgcatgacc gacttgtccg
     3061 cgtggcaacg cccgcatgtt tcggcgatgt tggcgcgatt gatcgttgag cgcggatcgc
     3121 tcgccggcag catggtggac aggtcgcggt tacgagcatg acagtcgaca caactcgccg
     3181 ccttgctgcc
//
LOCUS       DATDBY010000341         5823 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2681758, whole genome shotgun sequence.
ACCESSION   DATDBY010000341 DATDBY010000000
VERSION     DATDBY010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5823
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2681758"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..654)
                     /locus_tag="VIT19_06305"
     CDS             complement(1..654)
                     /locus_tag="VIT19_06305"
                     /inference="COORDINATES: protein motif:HMM:NF012523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloramphenicol acetyltransferase"
                     /protein_id="HEY5838632.1"
                     /translation="MPRYLDLETWPRRDLFEFYRRFDKPYFNVCTRLDVTNLLSALSA
                     RNHISVSLAYHYFALRTANEIEPFRYRLRDGKVVVHEVIHGGTTILLPNESFGLAYFH
                     YDPDFATFYEGASRAVADALGRGGGLKLEETDDDRLHFTTIPWISFTSFSHARNWKRE
                     DSATKIAFGKFAEDDGRTWLPISVEVHHALMDGLHVGRFLEQMQKALLSPDSYLQNR"
     gene            complement(738..4223)
                     /locus_tag="VIT19_06310"
     CDS             complement(738..4223)
                     /locus_tag="VIT19_06310"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5838633.1"
                     /translation="MTRESLGSFATGDVLRGRYRLESQIGRGGMGVVYRATDLQLHRT
                     VAVKVISENSSADARERLIREARAAAALNHPHIVSVYDVGEAKGLPFFVMELVDGQSL
                     SRMPPADLSRVIEIGLQICAALEHAHTNEIVHRDLKPDNVLISTTGEAVKLADLGLAL
                     AGHAARISHAGLVLGTPSYMAPEQALGQKVDARTDLYALGVLLYELTTGRVPFGGDDA
                     LTVLSQHVHAPPVPPRVLRSDLPRALELLILRLLEKNPDARFQTAAEVAAALRRPLNQ
                     PGLDDEADAAPAVAILDALSRGRLVGRATELAEVRQLWQRALDGQGHAVLLSGEPGAG
                     KTRLAREVTIQAAVDGAVVFTGGCYEYEATTPYLPFVEAFRRWVREEKHDANLRAALG
                     DAAPQIAKLAPEIETRFGPFPARAELSPHEERLLFFDAVVQVLSNLARSKGLLFYADD
                     LHWADRGTLWLMGHLLRQLREERALVVGCYRETELDRAHPLARALVDWNRERLVTRIT
                     LRRFGVEETNEQLSALLGENVSAEFGDAVHRETEGNPFFVEEVLKGLIEQGSVRRESG
                     RWKRCEVGELVIPQSVKETIGNRLDRVADQTNDVLRIAAVLGKTFSFDELQAAADNIS
                     EDVLLDALDESTTAQLVNSTGSESFTFTHDKIREVLYEELNPIRRRRLHRHAAEGLER
                     HGIKCEIERRGIPTDCAVERLAYHYIQAGDYENGLKYAKQAAAAAEKVFAIDEVIAAY
                     GRARDCAETLGLTEEQLSLEEAIGKTYLLHGDLIPAGEHFERALALAVDPHVRARLQT
                     EAASSLVAIGDQRGIEYLHEALTILDPVKEPLETANALANEARFHHLAARHSEAIELL
                     KRAADLVAPTAAAETVSTLAATIITQIYAYAAGAYEHYGLYDESNAWSRRAVEFGERH
                     NVSFAQAIGWEFLGENANHTGNFAAALEYADRERVIADRIHSRERRAWAQFIAGVASA
                     LLGDHQRAEREYTEGIALADAIGETRVGLLMKGYYAALQAEQGANAGSDTAKGQGLLD
                     AALECARQNYDESEASGLFYMRFESRRCLAIVYARRGELDEAEKICFSAAELVGPTES
                     RISQLWLGPVYLDVLLANAERHDKEERSDEAAAKRAYAREYLKNYEQLVSECQSPRFK
                     REAERIAEKLQSAAS"
     gene            4351..>5823
                     /locus_tag="VIT19_06315"
     CDS             4351..>5823
                     /locus_tag="VIT19_06315"
                     /inference="COORDINATES: protein motif:HMM:NF024572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5838634.1"
                     /translation="MIHFHRHRFAFLLMSLSTIIAVVAPLFLISSCQTLQNTPREAKA
                     RETLRSMTRGGVLPSDEIVARMENEFPRTTAGSLAKVVRARIRLKANDYAGAAALLDA
                     RAFADYTAIPDHVLWMRGNALEQAGRRVEARAAYESLARDYPNSLWADNALIRVAQMM
                     MQDGQGAAVPLVLKPLASKDKATALLLTAKAYEQAGDSTRALANYRRVYFFAPASSEA
                     SEAATAFTRLGSSNAPATADEAKARAEKLFAAKRYSEAYDAYTSLFLGAPASATSELA
                     ARRVIAAANARRFAEASSGLSATTGEGRAEAMFNIALAYARAKQWGQARTTADDMRRQ
                     FPNSLWTMRAFVQSGQRAEEAKNHADASYFYRAAVSSFAGNAEVTPAHFYIAWVAHEG
                     KNFTESSRLLTEHVAVYAGNNTDFRGKSAYWAARDSERAGKVAEARAIYQGLLDRYDA
                     NWYGYLSKQRLAELDRAGAPRREFPADSQIGRAVANLKTVT"
BASE COUNT         1200 a         1780 c         1670 g         1173 t
ORIGIN      
        1 ctagcgattc tgtaaatagc tatccggact tagaagcgct ttctgcatct gctcgagaaa
       61 cctgcctacg tgcaatccgt ccattagtgc gtggtgaact tcgaccgaga tgggcagcca
      121 cgtgcgaccg tcatcttccg cgaatttgcc gaaggcgatc ttcgtagctg aatcttcgcg
      181 cttccaattg cgcgcgtgcg aaaagctcgt gaaggagatc cacggaatgg tggtgaagtg
      241 gagccgatcg tcgtcagttt cttccagctt caatccacca cctcttccca aagcatccgc
      301 cacagcgcgg gacgcgccct cgtaaaacgt cgcgaaatcc ggatcgtagt ggaagtaagc
      361 gaggccaaaa ctctcgttag gcaaaagaat tgtcgtgcct ccgtgaatca cctcatgcac
      421 gacaactttt ccgtctcgca accgataacg aaagggctct atctcgttcg cggtccgcaa
      481 agcgaagtaa tgataggcaa gcgaaacgct gatgtgattg cgcgcgctca acgcgctcaa
      541 aaggttcgtg acgtccaggc gcgtgcagac attgaagtaa ggcttgtcga aacggcggta
      601 gaactcgaac aggtcacgac gcggccaggt ttcgagatcg agatatcgag gcatttttgg
      661 agtgtaatca attccctctt cgtttcggag aggggaatac aggttcacgc gcgcgtggct
      721 aaaacgtcga aaccgcttta agacgccgca ctctgaagct tctctgcaat ccgctcggct
      781 tctcgtttaa atcgcggcga ctggcattcg ctgaccaact gttcatagtt cttgaggtac
      841 tcgcgcgcgt acgcgcgttt tgcggcggct tcgtcagatc gctcctcttt gtcatgtcgt
      901 tctgcattcg cgagcagcac atcgaggtaa accggcccga gccacagttg actaatccgc
      961 gactcggtcg gtccaacaag ttctgcggca gagaagcaga ttttctcggc ctcatccaat
     1021 tcgccgcgac gagcgtaaac gattgccagg caacgccggc tttcgaaccg catgtagaac
     1081 aatcctgatg cttcgctctc gtcatagttt tgccgtgcgc attcaagcgc cgcgtccagc
     1141 aggccctgtc ctttcgccgt gtcgctacca gcgttcgcgc cctgctccgc ctgcaaggcg
     1201 gcgtaatacc ctttcatcaa caagccgacc cgcgtttcgc caattgcatc ggcgagcgca
     1261 ataccttccg tgtactcgcg ctctgcccgt tggtgatcgc ccagcagagc tgaggcaacg
     1321 ccagcaatga actgcgccca cgcacgacgc tcgcgggaat gaattcgatc cgcaatcact
     1381 cgttcgcgat ccgcgtactc caaggccgct gcgaaattgc cagtgtggtt tgcattctcg
     1441 ccaagaaatt cccagccgat ggcctgagca aaagagacgt tatgtcgttc accaaattca
     1501 accgcccgcc gcgaccaggc attcgattcg tcatagagcc cgtaatgttc gtacgcaccg
     1561 gccgcgtatg cgtaaatctg agtaatgatc gtggccgcca gagtagaaac agtttcggcg
     1621 gcggccgtcg gcgcaaccag gtctgccgct cgcttgagca attcgatcgc ttcactgtgc
     1681 cgggccgcga ggtgatgaaa tcgggcctcg ttggccagcg catttgccgt ttccagaggc
     1741 tctttgacgg gatcaagaat cgttagagct tcgtgaagat attcaatgcc gcgctgatct
     1801 ccaatcgcta ccaaagagct ggcggcctca gtttgaaggc gcgcgcgcac atgaggatca
     1861 acagccagcg ccagcgcccg ctcgaaatgt tcgcccgcgg gaatcaagtc cccatgcagc
     1921 agatatgttt tgccgatggc ttcttcaagc gagagctgct cttcggtcag gcccagtgtt
     1981 tcggcgcagt cacgggcgcg gccatacgcc gcgataactt cgtcgattgc gaacactttc
     2041 tcggccgcgg ctgccgcttg tttggcgtac tttaggccgt tttcatagtc gcccgcttgg
     2101 atgtagtggt aagccagccg ctcaacggcg cagtcagtcg gtattccccg gcgctcgatc
     2161 tcgcacttga tgccgtgccg ctccaaaccc tcggcggcat ggcggtgcag gcgccggcgg
     2221 cggatcgggt taagctcttc gtaaagcact tcgcgaattt tgtcgtgcgt gaaagtgaaa
     2281 gattcgctgc cggtgctgtt aaccagctgc gccgtggtgg attcatcaag cgcgtcgagc
     2341 aaaacgtctt ccgaaatatt atctgccgcc gcttgcagct catcgaagct gaacgtctta
     2401 cccagcactg ccgcgattcg cagaacgtcg ttcgtttgat cggctacgcg atccagccga
     2461 ttgccgatcg tttctttgac gctctgcggg atcaccagtt cgccaacttc acaacgtttc
     2521 caccggccgc tttcacggcg taccgaaccc tgttcaatca gccccttgag aacttcttcg
     2581 acaaagaacg gattgccttc agtttcgcga tggaccgcgt caccaaattc ggcgctcacg
     2641 ttctcgccca aaagcgcgct cagttgctcg ttcgtttcct cgaccccaaa acgacgcagt
     2701 gtgatgcggg tgaccagccg ttcgcggttc cagtccacca gcgcgcgcgc caggggatgc
     2761 gcccggtcga gttcagtttc gcgatagcag ccaacaacca gcgcccgctc ttcgcgtagc
     2821 tgacgcaaga gatgacccat cagccaaagc gtaccgcggt cagcccaatg aaggtcatca
     2881 gcatagaaga gaagtccttt gctgcgcgcg agattcgaaa gaacctgtac gaccgcgtca
     2941 aaaaagagca gccgctcttc gtgcggcgat aattcagcgc gcgcgggaaa cggcccgaaa
     3001 cgcgtttcga tctccggcgc caacttggca atctgcggcg cggcgtcacc cagcgcggcg
     3061 cgcaggttgg cgtcgtgttt ctcttcacgc acccagcgac gaaacgcctc gacgaagggc
     3121 agataaggag ttgtcgcttc gtattcatag caaccgccgg taaacacgac cgcgccgtcg
     3181 acggcagctt gaatcgtgac ctcgcgcgcg agccgcgttt tgccggcccc tggctcgcca
     3241 ctcaacaaga ctgcgtgccc ttggccgtca agcgcgcgtt gccatagttg ccgtacttcg
     3301 gcgagttccg tcgcccttcc aaccagacgc ccgcgcgaca gggcatcgag aattgccacg
     3361 gccggcgcgg cgtcggcttc gtcgtcgagg ccgggctgat tcagagggcg gcgcaacgcc
     3421 gcggcgacct cggcagccgt ttgaaatcgc gcatccggat tcttctccag cagccgcaga
     3481 atcagcagct ccagcgcgcg gggcaaatca gaacgcaaaa cgcggggtgg caccggcggc
     3541 gcgtgcacgt gctgcgaaag gaccgtcaaa gcatcgtcgc cgccgaatgg cacccggccg
     3601 gtcgtcagtt cgtacagcaa tacgcccagc gcatacaggt ccgtgcgcgc atcgactttt
     3661 tggcccagag cctgttcagg cgccatgtag gatggcgtac cgaggactag tccagcgtgc
     3721 gaaatgcgcg ctgcgtgacc agctaaagcc aggccaagat ccgcaagttt gaccgcttct
     3781 ccggttgttg agatgagcac gttgtcaggt ttcaggtcgc gatggacgat ctcgttggta
     3841 tgcgcgtgtt cgagcgccgc gcaaatctgt agtccaattt caatgacgcg tgaaagatcg
     3901 gccgggggca tccggctcag gctctgacca tcgaccaact ccatcacaaa gaaaggaaga
     3961 ccctttgcct cgcccacgtc gtaaaccgaa acaatgtggg gatgattcag cgccgcagcg
     4021 gcgcgggctt cacgaatcaa acgctcgcgc gcatcagccg aggagttttc cgagatcacc
     4081 ttcaccgcga ccgtccgatg cagctgcaaa tcagttgcgc gataaacgac ccccatgcca
     4141 ccgcggccga tttgcgattc cagccggtac cgcccgcgca ggacatcccc agtggcaaaa
     4201 ctgccaagcg attcacgggt catgatttca gtagcttggg actcgctcgt catggagtgc
     4261 aaagaatagc aattgcggga gtgggagcgt tagcccctcg tgttaagata gcggctctgc
     4321 ccccgcactt tgctcgcatc taatactgct atgattcatt ttcaccgaca tcgtttcgca
     4381 tttctgctga tgagcctgag tacgattatc gccgtcgtgg cgccgctgtt tctgatttcg
     4441 agctgccaga cgcttcaaaa cacgccgcgt gaggcaaagg cccgcgaaac gctgcgttcg
     4501 atgacccgtg gcggagtctt gccgtccgac gaaatcgtcg cgcgaatgga aaatgagttt
     4561 ccgcgcacga cggccggatc gctcgcgaag gttgtgcgcg cgcgcatcag gttgaaagcg
     4621 aatgattatg ccggcgccgc ggcgctgctc gacgcgcgcg cgttcgccga ttacacggcg
     4681 attcccgatc acgttttgtg gatgcgtggc aacgccctgg agcaagcggg gcgtcgcgtc
     4741 gaagcccgtg cggcttacga gagtcttgcc cgcgattatc cgaattcgct gtgggccgac
     4801 aacgccctga ttcgtgtggc ccagatgatg atgcaggacg gccagggcgc cgcagttcct
     4861 ttagtgctga agcctctggc ttcaaaagac aaggcgacgg cgttgctgct gactgcaaag
     4921 gcttacgagc aggctggcga ctcgacccgc gcgcttgcca actaccggcg cgtttacttt
     4981 tttgcacccg cgtcatcgga agcgagcgaa gcagccacag cgttcacgcg actcggctca
     5041 agcaacgcgc cggcgactgc cgacgaggca aaggcacgcg ccgagaagct tttcgcggcc
     5101 aaacgttaca gcgaggcgta cgacgcgtac acgtctctat tccttggtgc gccggcttcc
     5161 gcgacgtctg aacttgccgc gcgtcgcgtc atcgcggccg cgaacgcacg ccggtttgcc
     5221 gaagccagca gcgggctttc ggccacaacg ggcgaaggtc gcgcggaagc gatgttcaat
     5281 attgcgctcg cttacgctcg ggcgaagcag tgggggcagg cgcggactac agccgacgac
     5341 atgcgccggc aatttccaaa cagcctctgg acgatgcgtg ccttcgtgca atccggacag
     5401 cgcgcagaag aagccaagaa tcacgctgat gcgagctact tttatcgcgc cgccgtcagc
     5461 tcctttgccg gcaacgcaga agtcacccca gcgcacttct acatcgcttg ggtggcgcat
     5521 gaaggaaaga actttacgga atcgtcacgg ttgctgaccg aacacgtagc ggtttacgcg
     5581 ggcaacaaca cggactttcg cggtaagtca gcttactggg cggcgcgcga cagtgaacgc
     5641 gccggcaaag tcgccgaagc acgcgcaatt taccagggac ttctggatcg ctacgacgcg
     5701 aactggtacg gctatttatc aaagcagcga ctggcggaac tggatcgtgc cggcgcgccg
     5761 cgcagagaat tcccggccga ctcgcaaatt ggccgcgccg tcgcaaatct gaagacagta
     5821 aca
//
LOCUS       DATDBY010000342         3415 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1969966, whole genome shotgun sequence.
ACCESSION   DATDBY010000342 DATDBY010000000
VERSION     DATDBY010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3415
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1969966"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>3415
                     /locus_tag="VIT19_06320"
     CDS             <1..>3415
                     /locus_tag="VIT19_06320"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HEY5838635.1"
                     /translation="ATIQPDDPNAPAESWMNTVRLSATNSTLAYDGRPINNIDIEARG
                     RVNQIRAEIHELKLRSPVAEATLSGVMGDWRKLQYNFNVTSTVDLTQLSDVLATGTAL
                     RGVGNFTATITGEGDKYQLNGGVKSDALAAGNIRLQGLNVTAKGSGQGESYDFNGRAV
                     AQLLTAGDFQLNGVQLTGGVMGTGSDFRWVGELRAAAEKSYGTTITGLILRDAVAEYR
                     GGVLTVAAPQLIGSTLTTATARAAGIQANDIRVRSENGVTTATIATAKAGKIQSKDAT
                     IDGLTAKNIAANSRGDVTNVTVQEVKVGGINASGAQTGSINIAGVRLAIRNGRVQGTT
                     NDINAGTVKLENGQVENVKLARPSFTLEPSGNYRASADLSLGGGVLGEMKLGPARAAV
                     VASSDRIELKDFVAEALDGRASGNVTIALTKTGTSRVSTDFNNFDLAALIAMLSGRVV
                     PVSSRATGRAELTFTGKDLATATGNVNAQLQGAPSAADLAPLSGDVAVTANRGVFQIQ
                     RANLQTTATRLNAAGQFSLEEPISNLRVDVASSDASEIQRLLITSGALPEVEQQFQTY
                     GIDLAGKLNFNGTLAGALKDPLVTGHAELGSLIVNGRDLGSLNADIATTATETRVNNG
                     RLIQPNGGGAQFALVIPRVGESNTSIDATLDRMNTANLIAALPMTGGTREQFGSTEGE
                     ASGSVKISGIPNKMTGVADLRFGKGRLGGEPLQSLTARATFAGSTVNIESIDAAFDAG
                     HIVGSGKYDTETKAFDVKFNGDRVQIERLAALASRPGMPKFGGTAKLTATASGIFTDI
                     TSYQINFNADSTDVTIDGRPAGALKLAGVTENKQLNVTFSTTGLLGDQPQTVTARVDL
                     SNEKLPAVVESNITGADLTQVLKVLLPDTQVAVSGRATGTLKLSGNLMTENEAGEEVF
                     TWRGLTGSATFTELTVSVADVQLAPTGPLVIDFAGNEVTFRETRFTGPGTNVTVAGTV
                     ATGAGGRQNLAINGDVNLRVFSGLSPDVFSSGVARLFLRITGSYEDPRFLGTAEVTGA
                     SVSVFSGDQTITLSNLTGLIRFNSNQAQIERLTGTLGGGRVTASGGALLAGSARGRFA
                     LNLRGENVTLNYPKDFRSTVTADLSLNGDMTNQFIAGYVNVKRTEYTKDI"
BASE COUNT          738 a          998 c         1050 g          629 t
ORIGIN      
        1 cgcgacgatt cagcctgatg atccgaatgc gccggccgaa agctggatga acacggtgag
       61 gttgagcgcg actaactcga cgctcgcgta cgatggccgc cccatcaaca acatcgacat
      121 cgaggcgcgt ggccgcgtca atcagattag ggctgagatt cacgagttga agctccgatc
      181 accggttgct gaagccacgt tgagcggcgt gatgggtgac tggcgaaagc tgcaatacaa
      241 cttcaacgtt acttcgacgg ttgatctcac tcagctttcg gatgtcctgg ctaccggcac
      301 agcgttgcgc ggcgttggca acttcaccgc gacgatcact ggtgaaggcg acaagtatca
      361 actcaatggc ggtgtgaaat ccgacgcgct cgccgccggc aacattcgtc tgcaaggtct
      421 caacgtcacg gcgaaaggat cgggccaggg cgaaagttac gatttcaacg gccgagcggt
      481 tgcgcaactt ctgaccgccg gcgactttca attgaacgga gtgcaattga ctggcggtgt
      541 gatgggcacc ggctcggact ttcgctgggt cggtgaactg cgcgcggcgg ctgagaagag
      601 ttacggcaca acgatcaccg gcttgattct gcgcgatgcc gttgctgaat atcgcggcgg
      661 agttttgacg gttgcagccc cgcaactaat cggcagcacg ctcaccaccg caaccgcacg
      721 ggccgcaggt atccaggcca acgacatccg cgtgagatcc gaaaacgggg tcacgacggc
      781 cactatcgcg acggcgaaag ccggcaagat tcaatcgaag gacgcgacga tcgatgggct
      841 gaccgcaaag aacatcgccg cgaacagtcg tggcgacgtc accaacgtca ctgtgcagga
      901 ggtgaaagtc ggtgggatca acgcatcggg cgcgcaaacc ggcagcatca acatcgcggg
      961 agtacggctg gcgattcgca acgggcgcgt ccagggcaca accaacgaca tcaacgcggg
     1021 aacggtgaag cttgagaacg gtcaggtcga aaatgtgaag ctggcgcgac cttctttcac
     1081 gcttgagcct tccggtaatt atcgcgcgag cgcggatctg agtttgggtg gcggcgtgtt
     1141 gggcgaaatg aaacttggcc cggcgcgcgc cgcagtcgtc gcctcgagcg atcggatcga
     1201 gctgaaagat tttgtggctg aagccctgga cggacgcgcg agcggcaacg tcacgattgc
     1261 gctgacaaag acgggcacgt cgcgagtctc gactgacttc aacaatttcg atctcgccgc
     1321 gctcatcgcg atgctctcgg gacgcgtggt gcccgtttcc agccgcgcca ccggtcgcgc
     1381 cgagctgact ttcaccggca aagacttggc caccgccacc ggaaacgtga acgcgcagtt
     1441 gcagggggcg ccttccgccg ccgatctcgc gccgctctcg ggcgatgtcg ccgtcaccgc
     1501 caatcgcgga gtctttcaga tacagcgcgc taacctgcaa acgacagcga ccaggctgaa
     1561 cgctgcgggc cagttctcgc tcgaagaacc gatttcaaac ctgcgcgttg atgttgcttc
     1621 atctgatgcg tctgaaattc agcgattgtt gattacgtca ggcgctttgc ccgaagtcga
     1681 acagcagttt cagacctacg gaatcgatct cgccgggaaa ttgaatttca acggcacgtt
     1741 ggctggcgcc ttgaaggatc cgctggttac cggtcacgcc gaactcggct cgttgatcgt
     1801 caatggacgc gacctcggat cgctaaacgc ggacatcgcg accactgcaa ctgagacgcg
     1861 tgtgaacaac ggccggctga ttcaaccgaa cggcggcggc gcgcagttcg cgctggtgat
     1921 tccgcgcgtg ggcgaaagca acacgtccat cgacgccacg ttggatcgga tgaacacggc
     1981 aaatctgatt gccgcgttgc ccatgaccgg cggcacacgc gaacaattcg ggagcactga
     2041 aggggaagcg tcgggctcag taaagatcag cggcattccc aacaagatga ccggcgtcgc
     2101 ggatctgcgc tttggcaaag gacgtttggg cggcgagccg cttcagagcc tgaccgcgcg
     2161 cgcgacgttc gccggttcga ccgtgaatat cgagagcatt gacgcggcct tcgatgccgg
     2221 gcacatagtc ggcagcggca agtacgacac ggaaacgaag gcattcgatg tgaagttcaa
     2281 tggcgatcgc gtgcagatcg agcggctggc ggcgctcgcg agccgaccag gcatgccgaa
     2341 gttcggcggc actgcaaagc tgacggccac cgcgtcagga attttcacgg acattacttc
     2401 gtatcaaatc aacttcaacg ccgacagcac tgacgtgaca atcgacggcc gtcccgcggg
     2461 cgcgctgaaa cttgccgggg tcaccgagaa caaacaactc aacgtaactt tcagcacgac
     2521 gggattgctt ggcgaccagc cgcaaacggt caccgcgcgc gtcgatctct caaatgaaaa
     2581 acttcccgcc gtcgttgagt cgaacattac tggcgccgac ctgactcagg ttttgaaagt
     2641 cctgctgcca gacacgcaag ttgccgtcag cggccgcgcg accggcactt tgaaactctc
     2701 cggcaacctg atgacggaaa acgaggcggg cgaagaagtc tttacctggc gcggtcttac
     2761 cggctcagcc acgttcactg aactaaccgt cagcgtcgcg gacgttcagc tcgcgccgac
     2821 aggtccgctg gtcattgatt tcgcggggaa tgaagtcaca tttcgcgaga cccgctttac
     2881 cggtccggga acgaacgtaa cggtcgccgg aacagtggcg acgggcgcgg gcgggcgaca
     2941 gaacctggcc atcaacggtg atgtgaattt acgggtgttc agcggcctgt cgcctgacgt
     3001 tttctcttcg ggagtagcga ggctcttcct gcgcatcacc ggcagctatg aagatccgcg
     3061 ctttctgggt acggcggaag tgaccggcgc ttcagtatca gtcttctcgg gtgaccaaac
     3121 catcacgctt tcgaacctga cgggcttgat caggttcaat tccaatcagg cgcagatcga
     3181 gcggctgacg ggaacattgg gcggcggccg agttactgcg tcgggcggcg cgttgctggc
     3241 cggctcggcg cgcggacgtt tcgccctgaa tctgcgcggc gaaaacgtca cgctcaacta
     3301 tccgaaagat tttcgctcga cagtcaccgc tgatctttct ttgaacggag acatgaccaa
     3361 tcagttcatc gccggctatg tgaacgtgaa gcggactgag tacacgaagg acatc
//
LOCUS       DATDBY010000343         2479 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2056186, whole genome shotgun sequence.
ACCESSION   DATDBY010000343 DATDBY010000000
VERSION     DATDBY010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2479
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2056186"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            46..2196
                     /locus_tag="VIT19_06325"
     CDS             46..2196
                     /locus_tag="VIT19_06325"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5838636.1"
                     /translation="MSVRKIELATCLAIVVIAVASAAYAQQTAPAASQDPAEIIRIKT
                     ELVQAEVMVLDRHGRFVEGLSSDQFQVMFNGERRPLSFFEEVITGSSREGAQIASARG
                     HKELPDRQTPSSDRGRMIFFFLDDIHLSPASVARARKALQKFVDDDMNSNDQVAIVST
                     SGQIGFLQQLTDHPAVLRAAIARLTSKPSGDVYTGKTQITAYLASQVVDHGNRELFAA
                     LLESTKVEQQMGPGSRHGDHGLAASYTAVPHLRNRLRQINDEARMTTEMTLAALESLI
                     DSSSELPGRKTVFFLSDGFTVNERKAGALKLLQRITRKAAASSVIVYTMDTRGTAFNL
                     GSSVDASSNDYWDASSRRAGLARGEILATREPLSLIAKETGGRAIFDSNSIDDAIRQS
                     VSETSKYYLVAWRPQSDLELGVKSEARISISNRPDLTVRWRSNYSAPAATETAGNTKT
                     VPTNDDLRATLESAHPKKLLPLSLLAGYVSSPNGELIKISMQVERQFLDLNRLEQSDK
                     TEVDVVGVVIDARGAASSFKQLVTVKAKLPSAEPLVTWHQQLAIEPGIYQIRVAARER
                     SSGLMGSARQWIEIPETASRLALSSLFLGERKQSEESELTKPDEPTPITVDVDRRFAR
                     SSILRFQTYVYNAAVAGGQSDVWIQASVLSNRRQLLSAAPTKVPNNGDARQLAYWSEI
                     PLQSLAPGQYVLLLSATDRVARTTTTQQIRFSVE"
BASE COUNT          563 a          708 c          702 g          506 t
ORIGIN      
        1 gccgtctcct ctttccctaa agcgtctaaa cttacatcag ccgaaatgtc tgtcagaaaa
       61 atcgaacttg cgacgtgcct ggcaatcgtc gtgatcgctg ttgcctctgc ggcatacgct
      121 cagcaaactg ctcccgccgc ctcgcaggat ccggctgaaa taattcgcat caagaccgag
      181 ttggttcagg ccgaagttat ggtcttggat cggcatggcc gcttcgtcga gggcctttct
      241 tcagatcaat tccaggtcat gttcaatgga gagcggcgcc ctctgagttt cttcgaagag
      301 gtgataacgg gcagttcgcg cgagggcgca caaatcgcgt cggcacgggg ccataaagag
      361 ctgcccgatc gtcagacccc gtcgtctgac cgcggccgca tgatcttttt cttcctggat
      421 gacattcacc tcagcccggc cagcgtagcg cgcgcgcgaa aagccctgca gaaattcgtt
      481 gacgatgata tgaactccaa cgatcaggtg gcgattgttt ctaccagcgg gcaaattgga
      541 tttttgcagc aacttaccga tcacccggcg gtgctgcgcg cggctattgc gcgccttacg
      601 tcaaaaccga gcggcgacgt ttacaccggc aagacacaaa tcaccgctta cctggccagc
      661 caggtggttg accacggcaa tcgtgagctg ttcgcggccc tcctggaatc gaccaaagtt
      721 gagcagcaga tgggtcccgg cagccgtcat ggcgatcacg gtctcgcggc gtcttataca
      781 gccgtgccgc acctgcgcaa tcggttgcgg caaatcaacg acgaggcgcg catgacgacc
      841 gaaatgactt tagccgccct cgaaagtttg atcgattcat cgagcgagtt gcccggccgc
      901 aaaaccgtgt tctttctttc cgatggtttc acagttaacg agcgcaaagc cggcgcactt
      961 aaacttttgc agcgaatcac ccgcaaggcc gcggcttcaa gcgtgatcgt ttatacgatg
     1021 gacactcgcg gcaccgcatt caatctcggc tcatcggtcg acgcgagttc gaacgactat
     1081 tgggacgcgt cgtcgcgccg tgccggactg gcgcgcggcg aaatcctcgc gacgcgcgag
     1141 cctttgagtc taattgcgaa ggagaccggc gggcgcgcca tttttgactc gaattcgatc
     1201 gacgacgcta tacggcaaag cgtcagcgag acttcaaagt actatctcgt agcctggcgg
     1261 ccacaatctg acctcgagtt gggagttaag agcgaggcgc gcatatcgat cagcaaccgg
     1321 ccggacttaa ctgtccggtg gcggagtaat tacagcgctc ctgccgccac agagactgcg
     1381 ggcaacacga agactgttcc cacaaacgat gacttgcgag cgacgctcga gtcggcccat
     1441 ccgaaaaaat tgttgccgct ttcgctgctg gcgggctacg tcagctcccc aaacggtgaa
     1501 ctcataaaga tatccatgca ggtcgaacgg cagttcctgg atttgaaccg cctggaacag
     1561 tcggacaaga cggaagtcga tgtcgtcgga gttgtaatcg acgctcgcgg tgccgcgtcg
     1621 agttttaagc aactggtgac ggtcaaagcc aagctgccat ccgcagagcc cctggtaaca
     1681 tggcatcaac agttggcaat agaaccgggg atataccaga tcagggtcgc ggcgcgcgag
     1741 cgcagttcag gcttaatggg cagcgccagg cagtggattg aaattcccga gaccgcgtcg
     1801 cggcttgccc ttagtagcct cttccttggt gagcggaagc agagcgaaga atccgaacta
     1861 accaaaccgg acgaaccaac tccgatcacg gtagacgttg accggcgctt cgcccgatcg
     1921 tcgatcctcc ggtttcaaac gtatgtctac aatgcggcgg tagccggcgg tcaatctgat
     1981 gtttggatcc aagcgagcgt ccttagcaat cgtcggcagc tgctaagtgc cgcgcccacg
     2041 aaagtaccga ataacggcga cgcgaggcag ttggcttact ggtctgaaat cccgctacaa
     2101 agtttggcgc ccggccaata tgttctcttg ctgtccgcga cggaccgcgt agccaggaca
     2161 accactactc agcagataag attctcagtt gagtgacgca ccgagccggt gaagtttggg
     2221 tagacatcca ctctaacccg cattcaaaga ctcatccgca agaccggccg cagcgccggg
     2281 gtgcgcctga ttaaaaccga cgaaggcgac aagatgacta gcgcttcgct ggttgacgcg
     2341 ccgggtgagg aagaacaggc ggaatgaatt tcgatctgaa agccccgtag gggcagaatg
     2401 tttatagtcg accagcgggt ttaagaattc aaagctcctt taggagcgaa gtgtgatggc
     2461 ttccgttaca tcatttcgc
//
LOCUS       DATDBY010000344         2385 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1844271, whole genome shotgun sequence.
ACCESSION   DATDBY010000344 DATDBY010000000
VERSION     DATDBY010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2385
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1844271"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..316
                     /locus_tag="VIT19_06330"
     CDS             <1..316
                     /locus_tag="VIT19_06330"
                     /inference="COORDINATES: protein motif:HMM:NF021915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838637.1"
                     /translation="IDYKYGARHLKRAVERFLVYPLSNLVATGQIGLGDLVYVDLNST
                     TKRLVFSKQAGGALITEIPETPAQEKGLAARSGSVGLPIPQVKESKAAKKGQGRGERA
                     EG"
     gene            complement(350..1195)
                     /locus_tag="VIT19_06335"
     CDS             complement(350..1195)
                     /locus_tag="VIT19_06335"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEY5838638.1"
                     /translation="MTNHRKSKLLWRMASIITVVTSCVMFATFVAGQEGTRLTPAQRE
                     IERQRQRLGSPEVEERRDALMRLANLKRPEASRAAAAALNDASPTVRAAAAHAVISLP
                     NHEAAALLLPQLKDKTEFVRREVAFALGATRHPSALPALIDVLKRDKQPSVRAAAAVA
                     LGEIGDAAAVPALSQIIAGDGSKKQKSRSDEEEFVVRSAVRSLGQIGSRAAVPILIGA
                     LQNESNSIDTRREAAVGLGRLGDAAAVPALNAAFQANADPYLSEAARIAVRQINRTKV
                     KGARN"
     gene            complement(1199..2032)
                     /locus_tag="VIT19_06340"
     CDS             complement(1199..2032)
                     /locus_tag="VIT19_06340"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEY5838639.1"
                     /translation="MINYYEVLGVKRSAPASEIKSAYRKLARKQHPDVNRGSEKAARE
                     FALLSLAYHTLIDPQERAFHDQQLDKGTQAASILHSENPHAQRAREMQARWDRVVNQI
                     LENDRRESIARQRAVFTTVSLFLSTFFVAMIKPPLWQSFGVIGRAILVTLFMTGVWHL
                     IRRLREYFRHYTYRPNEIHYSITEEEKPEAKPFSRFSATAFLLGGYVVSLGIGLLIGW
                     HSQDFFSDLALLFRHVPSAVGASSSTTLLLIYDLLFYPPIAVLIIDTMHAVASRIDAG
                     N"
     gene            complement(2137..>2385)
                     /locus_tag="VIT19_06345"
     CDS             complement(2137..>2385)
                     /locus_tag="VIT19_06345"
                     /inference="COORDINATES: protein motif:HMM:NF013079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838640.1"
                     /translation="DYSNQIKSDIADIKNVGGKKAGTITATAFLKEFADGVSWAHLDI
                     AGTAWGDPATPFRSKGPTGVAVRTLVEFIERSAGQNAS"
BASE COUNT          506 a          676 c          708 g          495 t
ORIGIN      
        1 tatcgattac aagtacggtg cgcgacacct gaaacgtgcc gtcgagcgat tcctggtcta
       61 tcctttgtca aacctggtgg cgacaggaca aatcggacta ggcgatctgg tctacgttga
      121 cttgaattcg acgaccaaga gactggtgtt ctcgaaacag gcgggcggtg cattgattac
      181 cgagatcccg gaaacgccgg ctcaggagaa gggcctcgcg gcgcgatccg gaagtgtcgg
      241 cttgccgatt ccgcaggtca aggaatcaaa ggccgcgaaa aaaggccagg gtcgcggcga
      301 acgcgccgaa ggctaacccg cacgacatgc gaactacaca ggcgtcggat taatttcggg
      361 cgccttttac ttttgtgcgg ttgatttgac ggacagcgat gcgtgcggct tccgaaagat
      421 aagggtcagc gttggcttga aaagctgcgt tcaaagcggg cacggcggca gcatcgccaa
      481 gccggccaag cccgactgcg gcttcacgtc gcgtgtcgat cgagttcgat tcattctgta
      541 gcgccccgat cagaatcggc actgcggcgc gacttccaat ctgtccgagt gatcgcaccg
      601 ccgacctgac cacgaattct tcttcgtcac ttctggactt ctgctttttt gaaccgtcgc
      661 cggcgatgat ctgcgagagc gcgggcacgg ccgcggcgtc gccgatctca cccaaagcaa
      721 ccgcggccgc cgcgcgcacc gagggttgtt tgtcacgctt cagcacatcg attagagcgg
      781 ggagtgcgga aggatgacga gttgcgccca gggcgaatgc gacctcgcgg cgcacgaatt
      841 ccgttttgtc tttgagctgc ggaagtaaca gcgccgcggc ttcatgattg ggcagagaga
      901 tgactgcgtg ggcagccgcg gcccgcacgg tcggactggc gtcattcagc gctgccgcag
      961 ccgcgcgtga cgcttcgggc cgcttcagat tcgccagacg catcaacgca tcgcggcgtt
     1021 cctcaacctc cggcgatccc agccgctgcc gttgccgctc aatttctcgc tgagccgggg
     1081 tcaggcgcgt gccctcttgc ccggcgacga atgtcgcgaa catgacgcag gatgtgacga
     1141 cggtgatgat gctcgccatt cgccacaaca gttttgattt ccggtgattt gtcatccgct
     1201 aattcccagc atcgattcgc gacgcgaccg cgtgcatggt gtcaataata agaacagcga
     1261 tcggtggata aaacaatagg tcgtaaatga gcaggagcgt tgtcgaagat gaggcgccca
     1321 cggcgcttgg aacatgccga aacaaaaggg ccaaatctga aaagaaatcc tgtgaatgcc
     1381 aaccgattaa caagccgatg cccaggctca ccacatagcc gcccaacaaa aacgccgtag
     1441 ctgaaaatct cgagaatggc tttgcctcag gcttctcttc ttcggttatt gaataatgaa
     1501 tttcgttcgg cctgtatgtg taatgccgaa agtattcgcg caggcggcga atcaggtgcc
     1561 acaccccggt catgaacagc gtcacgagaa tggcgcgacc gatcacgccg aacgactgcc
     1621 acaacggcgg cttgatcatg gcgacgaaaa acgtcgaaag aaaaagcgac accgtcgtaa
     1681 agacggccct ttggcgagcg atactctcgc gccgatcatt ctcgaggatt tgatttacga
     1741 cgcggtccca acgcgcctgc atctcgcgcg cgcgttgcgc gtgcggattc tccgaatgca
     1801 ggattgaagc ggcttgcgtg cccttgtcga gttgctgatc gtgaaacgcg cgttcctgcg
     1861 gatcgatcag tgtgtggtag gccagcgaca gcagggcgaa ctcgcgtgca gctttttcgg
     1921 atccacgatt tacatcggga tgctgcttgc gcgccagctt tcgataggcg gacttgatct
     1981 cgctggcggg cgctgaacgc ttaactccga ggacctcgta ataattgatc atcgtagggg
     2041 aataagggat tcgcgctcgc ttttgccgcg tgattgcggc gcgaaccctc agtttcaggg
     2101 agattttagc accgttcgac gcgaggcggc gaacctttaa gatgcgttct ggccagccga
     2161 gcgttcgatg aattcgacca aagttcgcac cgcaactccg gttgggccct tggaccgaaa
     2221 aggtgtggcc gggtcgcccc aggcagttcc cgcgatatca aggtgcgccc acgaaacccc
     2281 gtcggcgaac tctttcaaaa aggccgtcgc ggtgatcgtg ccggcttttt tgccgcccac
     2341 attcttgatg tccgcgatgt cggatttgat ttggttcgaa taatc
//
LOCUS       DATDBY010000345         3746 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1044438, whole genome shotgun sequence.
ACCESSION   DATDBY010000345 DATDBY010000000
VERSION     DATDBY010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3746
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1044438"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /locus_tag="VIT19_06350"
     CDS             complement(<1..396)
                     /locus_tag="VIT19_06350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838641.1"
                     /translation="MRHVRGFDVARPTSIGLMVGIMMPLVILPMLSIFIVGMRKGFGF
                     FWASLVSPEAIYALKLSMVTSFWATVFNVLFGLLAAYVLSRYDFWGRNAVIVTISLPT
                     AIPTAVAGFALLALWGPQGTLGRFLFPPEG"
     gene            complement(421..1425)
                     /locus_tag="VIT19_06355"
     CDS             complement(421..1425)
                     /locus_tag="VIT19_06355"
                     /inference="COORDINATES: protein motif:HMM:TIGR00971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0043199 - sulfate binding [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY5838642.1"
                     /translation="MACLVLFLLGIGSCLPQPPSQGGGGTNITLYGFSIMKESLEKSI
                     YPAFSAKWKSEHGVDVRFTSSFAGSETITNQILQGVKAQIAILSIERDAQRLKYGGAV
                     TSDWLALPHKGVVNKTPFVILVRKGNPKGIRDFADLAKPGVKLIHPDPESSGGAQWSI
                     LAIYGSELVKTEKQFGAAQPARALQMLQAIWRNVVSTPGSAREARATFEQGYGDALVT
                     YELEGLLLKDAGGAFEIIVPEATIFSEHPIVIVDRNVPPADRSIIEAFVRFLWTDEAQ
                     RAFVKNHFRPVTDDALTQENKDLATIKYPFTVDYFGGWGRAYPEVIEAVFKNQVQKRK
                     "
     gene            1753..2784
                     /locus_tag="VIT19_06360"
     CDS             1753..2784
                     /locus_tag="VIT19_06360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838643.1"
                     /translation="MPDFFGRWMRAREIAHTKRDHNRVVRPFAWGLEFLTDHVNGGDP
                     RNVLREHTARAMAQSEEFYALPEISDWQLEGDHLTWTSAVQTPSIENNTVHARLFTPK
                     RERKNKPRAAVVVLPQWNAQPDSHVEACRIFNRLGMTALRLTLPYHQERKPPDIERAE
                     HLVSSNIGRTIQSMRQAVLDTRAAVRWLKLQGFERIGILGTSIGSCTAFLAFAHDPDI
                     NVGTFNHVSGYVADVVWQGISTQHVRQGIESELTLDELREFWRPISPVPFIQRLVSMK
                     PRAMRFIAAKYDLTFPADLSHEVINEVRQRGIDLDVVWLSCGHYTTAELPWKAIDAWK
                     IATFMRKHL"
     gene            complement(2765..3250)
                     /locus_tag="VIT19_06365"
     CDS             complement(2765..3250)
                     /locus_tag="VIT19_06365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838644.1"
                     /translation="MKNRIKLSLQVAWLTAAFVVLVMGFNFCAATDRACFEAGDRMFL
                     AMVVLSFPSGFLGVALTLLVLGPPASVDQLNDYVTFWLIMAGAGYLQWFVILPRLFAK
                     PYFTILNLKATETVAKVTAAKVSRPARPRRRIRRTLAYDKLGRTPLERAMSSNSTDAS
                     A"
     gene            3409..>3746
                     /locus_tag="VIT19_06370"
     CDS             3409..>3746
                     /locus_tag="VIT19_06370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838645.1"
                     /translation="MLTKLASAKIADADELVRLHETLLFHAAYPQSKPVLGKVERILK
                     SVGPRVATLGTQDADLSPLDAPEVSGIAGGSVTSNFSYALARWLARKYPRQLSIDWDW
                     MENEEQWSATL"
BASE COUNT          861 a         1049 c         1079 g          757 t
ORIGIN      
        1 gccttcgggc ggaaacagga aacgtcccag agtcccctgc ggtccccaaa gcgcaagcaa
       61 agcaaatccg gctacggccg tggggattgc ggtcggcaga gagatcgtga cgatgaccgc
      121 gttgcgtccc caaaagtcat aacgcgaaag cacgtacgcg gcgagcaggc cgaagagcac
      181 gttgaagact gttgcccaga agcttgtgac catcgacagc ttcaaagcgt agatggcttc
      241 gggcgaaacc agggaggccc agaagaagcc gaagcctttc cgcatcccga cgatgaagat
      301 tgaaagcatc ggcaggatca cgagcggcat catgatgccg accattaaac cgatgctggt
      361 tgggcgggcg acatcaaagc cgcgtacgtg ccgcattgag cgaattctgg ccacgtctgt
      421 ttactttctc ttctgcacct gattcttgaa gacagcttcg atcacttccg gatacgcgcg
      481 tccccaaccc ccgaaatagt ccaccgtgaa cggatacttg atggttgcga gatccttgtt
      541 ttcctgcgtc agggcatcat ccgttaccgg gcgaaaatga tttttcacga aggcgcgctg
      601 agcttcgtca gtccacaaaa aacgcacgaa cgcttcgatg atcgaacggt cagccggcgg
      661 aacattccgg tcaacgatga cgatcggatg ctcactgaag atcgtcgctt cgggcacgat
      721 gatttcaaac gcgccgccgg cgtcctttag caaaaggcct tcgagttcat aagtgaccag
      781 cgcgtctccg taaccctgct caaacgtcgc ccgtgcttca cgcgcggaac ctggagtgga
      841 aacgacgttg cgccagatgg cttgcagcat ctgaagagcg cgcgcgggtt gggcggcgcc
      901 gaactgcttc tcagtcttga cgagctctga accgtagata gcgaggatcg accactgcgc
      961 tccgcctgaa ctctcgggat cgggatgaat caacttaact cccggctttg cgagatcggc
     1021 aaaatcacgt atgcctttcg gattcccctt ccggaccaga atcacaaacg gcgttttgtt
     1081 gacgacgcct ttgtgcggca acgcgagcca gtctgaagtt accgcgccgc cgtacttcag
     1141 ccgttgcgca tcacgctcga tcgaaaggat ggcaatctgt gccttcacgc cttgcaggat
     1201 ttgatttgtg atggtctcag aacccgcgaa cgatgaggtg aagcgcacgt caaccccgtg
     1261 ctcactcttc catttcgccg aaaaagccgg atagatagac ttctccagcg actctttcat
     1321 gattgaaaag ccgtaaagag tgatgttcgt gccgccgccg ccctgcgatg gtggttgagg
     1381 gaggcagctg ccgatgccga gtagaaacag aacgaggcat gccatcgtca ctgtccaatg
     1441 cttccgggca atcatctcgt cggtggtgcg tttctccgtg tctctgtgcg gcctcagtgc
     1501 ctcggtggtg ggctacttca acatgagctc accaccaaag acacagaggg ttcacagaga
     1561 cacagagact gaaaggatct cgacctaact tatctcaaaa aatctgcttt gcttgatttt
     1621 tacttgggcg gaactttagg atgactgact cgattctgca aggaaactcg agcggttcaa
     1681 gattgaaaaa gagtggcacg ggcggcccgc ccgcgattca cgcgcaatat gcgcgtgcca
     1741 cattcggaca agatgcctga cttcttcgga agatggatgc gcgcgcgcga gattgcgcac
     1801 acaaaacgcg accataatcg cgtggtgcgg ccgtttgcct gggggctcga gttccttacc
     1861 gatcacgtta acgggggcga cccccgaaac gttctgcgcg agcacacggc gcgggcgatg
     1921 gcgcagagcg aggagttcta tgcgctgccc gagatttccg attggcagct cgaaggagat
     1981 cacctgacct ggacaagcgc agttcagacc ccgtccattg aaaacaacac ggtgcatgcg
     2041 cgcctgttca cgccaaagcg cgaacgaaag aacaaaccgc gcgctgccgt cgtggtgctg
     2101 ccgcagtgga acgcgcaacc cgacagtcac gtggaagcat gccgcatctt taaccgactc
     2161 ggcatgactg cgctgcgcct gacgcttcct tatcaccagg aacgaaagcc cccggacatc
     2221 gaacgcgcgg agcatctggt cagctcaaat atcggacgca cgattcaatc gatgcggcag
     2281 gcggtgctgg acacgcgcgc ggccgttcgc tggctgaagt tgcagggctt tgagcggatc
     2341 gggattcttg gcacgagtat cggatcgtgc acggcttttc tcgcattcgc acacgacccg
     2401 gacatcaacg tcggcacttt taatcatgtg tcgggctacg ttgcagatgt ggtgtggcag
     2461 ggaatctcga cccagcacgt gcgccaggga attgaaagtg agctgacact ggacgagctg
     2521 cgcgagttct ggcggccaat cagcccggtc cctttcattc agcggctggt cagcatgaag
     2581 ccgcgagcga tgcgcttcat cgccgcgaaa tacgatctga catttcccgc ggatctttcc
     2641 catgaagtga tcaatgaagt gcgacaacgc ggtatcgatc tcgatgtcgt ctggctgtcc
     2701 tgcggtcatt acacgactgc tgagttgccc tggaaagcga tcgatgcgtg gaagatcgcg
     2761 acgttcatgc ggaagcatct gtagagttcg acgacatagc gcgttccaaa ggcgtgcggc
     2821 cgagtttgtc gtaagcgaga gtacgcctga ttcgtcggcg agggcgtgcc ggacgggaaa
     2881 ccttagccgc ggtcactttg gcgaccgtct ctgttgcttt gagattaaga atggtgaaat
     2941 acggcttggc aaacagtcgg gggagaatta caaaccactg caaataacca gcccctgcca
     3001 taatcagcca aaatgtaacg tagtcattaa gctggtcgac gcttgctggc ggccccagaa
     3061 caagaagggt cagggctaca ccgagaaagc ccgacggaaa cgacagcacc accatggcca
     3121 aaaacattct gtcacccgcc tcaaagcagg cccggtctgt agccgcgcaa aagttgaatc
     3181 ccataaccag caccacgaag gccgctgtga gccatgccac ttgcaaagag agtttgattc
     3241 gattcttcat cgtcgtcgaa ccggcgagtt ctacgtttct gatttagact cgggctgctg
     3301 aaagattgtt cccgacgcga catgccagcg acacttaatc agttactcga taagctggac
     3361 gcagcgaggc agccctacgg ctccgtcaaa agtagtgagc ttgtaggcat gctgaccaag
     3421 ctggcgagcg caaagatcgc cgacgcggat gagcttgtac gcctacatga gactctcctt
     3481 tttcatgctg cttatcctca aagcaaaccg gttctgggaa aagtcgaacg catcttgaag
     3541 tctgtggggc cgcgagttgc gacgttaggg acgcaggatg ccgatctgtc gccgctcgac
     3601 gcgccggaag tttcgggaat cgccggcggg agtgtgacga gcaacttcag ttacgcgctc
     3661 gcgcgctggc tcgcgcggaa gtatccgcgc caactgtcga tcgattggga ctggatggag
     3721 aacgaagagc agtggtcagc gactct
//
LOCUS       DATDBY010000346         2744 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1258847, whole genome shotgun sequence.
ACCESSION   DATDBY010000346 DATDBY010000000
VERSION     DATDBY010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1258847"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..658)
                     /locus_tag="VIT19_06375"
     CDS             complement(<1..658)
                     /locus_tag="VIT19_06375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838646.1"
                     /translation="MKRTLSFIGLFVVFAFATAQAISLSPQQPSDPAVKTTSVLGKVA
                     EKNAAAGTLTVKTDAGSVVQVNTSEKTTFDRMPPGETDRTKAIKTSLTEITVGDGVYV
                     RGFVAADRKSVPAQQIVVVSQSDIAQKQEKERMEWRRRGVSGIVASTNPATKEVTITS
                     RALMGGPQSVVIPITDKTKVLRYPPDSIPKYSDAKRSSFEEVKVGDQLRALGDKSTDG
                     L"
     gene            complement(805..1203)
                     /locus_tag="VIT19_06380"
     CDS             complement(805..1203)
                     /locus_tag="VIT19_06380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838647.1"
                     /translation="MTLTGRTTLKIWLVLVAVFLLGSVTGAALTGLYRSRASAGRNGR
                     DRGKHEQRFEKMRQELNLTDQQATDVRTILDQTRNDYRALREELRPRFETPRLNARAK
                     IRALLNADQQKKFDALAAQQDAEHKAGEKR"
     gene            complement(1200..1622)
                     /locus_tag="VIT19_06385"
     CDS             complement(1200..1622)
                     /locus_tag="VIT19_06385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838648.1"
                     /translation="MFGKTPQNDEQLDRLGKLVLRAAAADEQEIETASTAPFLFTRIR
                     AQIAEGRREESTGWQSLPLIAWRAIPAMALIAMLAGGLTIWTAESNTTPIGFGIYEEA
                     LSDTTNPGIEQAVLDQNSLSRDDVLTIVVERSNRENKK"
     gene            complement(1730..2308)
                     /locus_tag="VIT19_06390"
     CDS             complement(1730..2308)
                     /locus_tag="VIT19_06390"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5838649.1"
                     /translation="MHPAEQPTDDALVAAAGTGDEAAFEALFNRHRRQVGRIAGRFFA
                     QREQIEEIIQDTFTKLYLALHTYHGTHEASFKAWLAQITVNACYDQLRRQRRRAEQSL
                     GDLTETETHDFSTQLRSARSDIEGALVSRDLALKLLTRLSAEDRLVLTLLDVEGFSVA
                     EISEMTNWSISKVKVRAHRARAHLRRIMKKFV"
     gene            complement(2354..>2744)
                     /locus_tag="VIT19_06395"
     CDS             complement(2354..>2744)
                     /locus_tag="VIT19_06395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838650.1"
                     /translation="QLTSLRVAIIGLVGSIAITVGVFLCLLVLPSVIGAIVALLAFLL
                     VIVATIFGRSVISAATGRWLQRRFFPKLKSESVTLLLGVTFWVVMASLPYVWPIVVAG
                     LLVTSLGLALTARYRLSWKKPESQANC"
BASE COUNT          588 a          809 c          754 g          593 t
ORIGIN      
        1 gcaaaccatc ggtactcttg tcgccgagag cgcgtaattg gtcgccgact ttcacttctt
       61 caaaactgct ccgcttcgcg tcgctgtact tgggaattga atccggcgga taacgcagaa
      121 cttttgtctt gtccgtgatc ggaatgacaa ccgactgtgg cccacccatc aaagcacggc
      181 tcgtgatcgt gacttccttt gtcgcagggt tcgtggaagc gacaatgccg ctaacaccgc
      241 gacgacgcca ttccatccgt tctttttcct gcttctgcgc gatgtcggat tggctgacga
      301 caacaatctg ttgcgccgga accgatttgc gatcagccgc gacaaaaccg cgcacgtaga
      361 cgccgtcgcc gacagtaatt tcagtcagcg aggtcttaat ggctttcgtg cgatcggttt
      421 cgcccggcgg catgcggtcg aacgtcgtct tttcgctggt gttaacctgg acgacggaac
      481 ccgcgtcggt cttaacagtc aatgtgcctg cggccgcatt cttttcagcg actttgccca
      541 aaacgctcgt cgttttgacg gccggatcgc tgggttgctg gggtgataat gaaatggctt
      601 gcgcggtcgc aaacgcaaag acaacaaaaa gcccaatgaa tgaaagtgtt cttttcacga
      661 tgttccgatg tgccccctgt ggaagtaact tatttacgcc gcaaacgtgt cgttagttgc
      721 acaaatgtcg aaggaaaact tcatttagct agtccaggga cgcctcacgg acgctgttca
      781 ttaacagagt ctccggacta gctcttagcg tttctctccc gctttgtgct cggcgtcctg
      841 ctgagccgcg agcgcgtcaa atttcttctg ctggtcggcg ttcagcaacg cgcgaatctt
      901 ggcgcgggcg ttcaaccgcg gcgtttcgaa acgcggccgc agttcctcgc gcagcgcgcg
      961 ataatcgtta cgcgtctgat ccaaaatcgt gcgcacgtcg gtggcttgct gatcagtgag
     1021 attcagttcc tgccgcatct tctcgaaccg ttgttcatgc ttgccgcgat cgcgcccgtt
     1081 gcgtcccgcg ctcgcgcgcg aacgatacag gccggtcaac gccgcgcccg tgactgaccc
     1141 gagcaggaac accgcaacca gcaccagcca aatcttcaat gtcgttcgac ctgttaacgt
     1201 catttcttgt tctcccgatt gctacgttct acaacaatgg tgagaacgtc atcgcgcgac
     1261 aaactgtttt ggtcgaggac tgcctgctcg atcccggggt tagtcgtatc ggagagcgcc
     1321 tcttcgtaaa tgccaaagcc gatcggcgtc gtgtttgatt ccgccgtcca aatcgtcagg
     1381 ccgcccgcaa gcatcgcaat caaagccatc gccggtatcg cccgccaggc gatcagcggc
     1441 aaggattgcc agccggtcga ttcttcacgc cgcccttcag caatctgtgc gcgaatgcgg
     1501 gtgaacagaa atggggcagt cgaggctgtc tcaatttcct gctcgtcagc cgccgcggct
     1561 cgcaaaacca gcttgccgag gcggtcaagt tgctcatcgt tttggggggt ctttccaaac
     1621 atggtgctta atctccgctt tttccctgcg tttagctcca caaaccagag acgatgaagc
     1681 cgcccctggg gttacacgca ttgtcgttta ggcgctaaag gcggccaacc tacacaaact
     1741 tcttcataat ccgtcgcaag tgcgcccggg cgcgatgcgc gcgcaccttc actttcgaga
     1801 tcgaccagtt ggtcatctcg gagatttcag ccaccgaaaa cccctcgacg tcgagcaggg
     1861 tcaggacgag acggtcttcg gcactcaaac gcgtcagcag cttcaaagcc agatcgcggg
     1921 aaaccagcgc gccttcaatg tcgctgcgag cggagcgaag ctgggtggaa aaatcatgcg
     1981 tctcggtttc agtgaggtcg cccagcgact gttctgcgcg gcgacgctgg cgccgcaatt
     2041 gatcgtaaca ggcgttgacg gtgatctgcg cgagccaggc tttaaatgat gcctcgtgag
     2101 ttccgtgata ggtgtgcagc gcgaggtaaa gtttcgtgaa ggtgtcctga attatctctt
     2161 cgatctgctc gcgctgcgca aagaagcggc cggcgatgcg cccaacctgg cggcgatgac
     2221 gattgaagag cgcttcgaac gcggcttcgt cgccggttcc cgcagcagcg accagcgcgt
     2281 catctgtcgg ttgttcggca gggtgcacaa tcgttgctct ctctagcgca agttggcaac
     2341 ttgcgaacgc aaactaacaa tttgcttgtg actcaggctt cttccaactg aggcgataac
     2401 gcgccgtcag cgccaggccc aggctggtga ccagcaaacc agcgacgaca atcggccaca
     2461 catacggcag agaggccatg accacccaaa acgtaacgcc gagcagcaga gtgacggact
     2521 cagatttaag tttaggaaaa aatcggcgct gtaaccaacg gccggtggct gccgaaataa
     2581 ccgagcgacc gaagatcgtg gccacgatca ccagcagaaa cgccagtagc gcgacgattg
     2641 cgccaatcac tgagggcaaa accagcaaac agagaaacac gcccaccgtt atggcaatcg
     2701 aaccaaccag cccgatgatg gcgacccgca aactggtcag ttgc
//
LOCUS       DATDBY010000347         2225 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1515012, whole genome shotgun sequence.
ACCESSION   DATDBY010000347 DATDBY010000000
VERSION     DATDBY010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515012"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            284..1339
                     /locus_tag="VIT19_06400"
     CDS             284..1339
                     /locus_tag="VIT19_06400"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5838651.1"
                     /translation="MIRTISIAILSLSCCAVTLAQGQRQPPVLRGSNARPVTSSDAND
                     KSSEPEDVGEGGVVRVSTSLITVPAVVMDRNGRYIGNLRKEDFRIYEDGVEQEVAYFA
                     SVEKPFTVALLLDVSGSTQFQLAQIREAANTFVGRLRMNDLLMAVTFDGRVNVLTQPE
                     KVAVIRRGKLHIPAVTDGTVLYDTVDFALKRMAQIPGRKAIVLMTDGVDQDSRVSMKA
                     TLEGIAEQDLLVYTVQYNTLPQLPERLSRIKDEKTRRKVRERLLKGYALSEPYLRTLA
                     EKTGGRFYRADDLRQVGPAFEAITSELGVHYSLGFYSKHSANADGERAIKVKVRYPNM
                     VVRTRDSFSTSSVAQKH"
     gene            complement(1449..>2225)
                     /locus_tag="VIT19_06405"
     CDS             complement(1449..>2225)
                     /locus_tag="VIT19_06405"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5838652.1"
                     /translation="DWRLQLSYRMQFFIRALSILIMVTTLFFISKIFAGYTDPRFAQW
                     GNPLAAWLTGLAVLSYFMTGFSSLANAIRQEQVQGTLESVLMTPISVPTVIVASSAWD
                     FVQATFFSSLYLLFGWLFFDVHYRGNFLLALAFLLLTTVVLSCLGILSASFAMVFKRG
                     DPFGIFLGAGSALFSGVFFPTQLISEYAGGLKYVSWILPATHGLDGIRRVLIQGQGFG
                     QVREPLITLLVFLAVLLPLSLWVFGRAVRRAKREGSLIQY"
BASE COUNT          560 a          598 c          628 g          439 t
ORIGIN      
        1 catttttgct gctgcattcg accaccggac taaagccacg gtgtgactaa gaagctcaaa
       61 ctgaaacttc cacttaatgc tgtctttgct tcacattgcg atcctttgcg tcgaattttt
      121 ttacacgttt ggtttcacgc aaatgcgcca agacgcaaag aaacgcaacg taggagacac
      181 aaccgccggc cgtacgccct gaaatacggc cttgtttcgt cgtttttaac taattcacgg
      241 tgaagcaaca ggaaccgagg tttcatcgct gcggacccac gatatgatca gaacaatttc
      301 gattgccatt ctgtccttaa gctgctgcgc agttacgctg gcgcagggac aacgacaacc
      361 accagtcttg cgcgggtcga atgcgcggcc agtcacctca tcagacgcaa acgacaaaag
      421 ttcggagccg gaagatgtcg gagaaggtgg cgtcgtgcgg gtcagcacga gcctgatcac
      481 tgtgcccgcg gtagtgatgg atcgaaacgg ccgctacatc ggcaacctgc gcaaagaaga
      541 ctttcggatt tacgaggacg gtgtcgaaca agaggtcgcc tatttcgctt ccgtcgaaaa
      601 gcctttcacg gttgccttgt tactggatgt cagtggctcg acgcagtttc agctcgcaca
      661 gattcgcgaa gctgcaaata ccttcgtggg ccgcttgcgc atgaacgacc tgctgatggc
      721 agttactttc gacggaagag taaacgtgct gacacagccg gaaaaagttg ccgtgattcg
      781 tcgtggcaaa ctccacattc cggcggtgac tgacggcacg gtgctctacg acactgtcga
      841 tttcgcgctc aaacgaatgg cgcaaattcc cggccgcaaa gcgatcgtat tgatgaccga
      901 cggcgtcgat caggatagcc gcgtgtcgat gaaagcgacc ctcgaaggca ttgccgagca
      961 ggatcttctg gtttacacgg tccaatacaa tacgctgccg caattgccgg aacgactgag
     1021 ccggataaaa gatgagaaga cgcgacgcaa agtgcgcgag cgtctattga agggctatgc
     1081 gcttagcgag ccttatttgc gcacactcgc tgagaagact ggcggacggt tctatcgggc
     1141 cgatgatttg cggcaggttg gcccggcgtt tgaagcgatc acttctgaat tgggagtgca
     1201 ctacagtctg gggttctact caaagcattc agcgaacgct gacggcgagc gcgcgatcaa
     1261 agtgaaggtg cgttatccga acatggtcgt gaggacgcgg gatagtttct caacatcgtc
     1321 cgtggcgcag aaacattagc cgccgattca cgcggagatg ggggagtagc ccgaccgtta
     1381 gggagggctc gtaagccgcg gatttggagc cctccctgac ggtcgggctt ctgcccggaa
     1441 tctgtttctt aatactgaat caaactccct tcacgtttag ccctccggac ggcgcggccg
     1501 aaaacccaaa gagacaacgg aagcagcacc gctagaaaaa cgagcagagt aattaagggc
     1561 tcgcgtactt gcccgaatcc ctgcccctgg atcagcacgc ggcgaatgcc atcgagaccg
     1621 tgcgtggccg gcaaaatcca cgagacatac ttcaggccgc cagcgtactc gctgataagt
     1681 tgcgtcggaa agaagactcc ggagaaaagc gccgagccgg cgccaagaaa aattccgaag
     1741 ggatcgccgc gcttgaagac catggcgaag cttgcggaga gaattcccag acacgacagc
     1801 accacggttg ttagcagcag gaacgccaat gccagcagga agtttccgcg atagtgaacg
     1861 tcgaaaaata accagccgaa cagaagataa agcgacgaga agaatgtcgc ctgcacgaaa
     1921 tcccacgctg aactcgccac gatcacggtg ggcacgctaa tcggcgtcat cagaacgctt
     1981 tccagggttc cttgcacctg ctcctggcga atcgcgttcg cgaggctcga gaagccagtc
     2041 atgaaatagc tcagcaccgc cagcccggta agccaggcgg ccagagggtt gccccattgc
     2101 gcgaaacgcg gatctgtata gcccgcaaaa attttcgaga tgaagaagag cgtcgttacc
     2161 attatgagaa ttgagagcgc gcggataaag aactgcatgc ggtaactgag ttgcagtcgc
     2221 cagtc
//
LOCUS       DATDBY010000348         3005 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2051081, whole genome shotgun sequence.
ACCESSION   DATDBY010000348 DATDBY010000000
VERSION     DATDBY010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3005
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2051081"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1255
                     /locus_tag="VIT19_06410"
     CDS             <1..1255
                     /locus_tag="VIT19_06410"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY5838653.1"
                     /translation="AKTEEFIRKNLAGQKTKQAKSRRTMLQRLERVDAVRGNQASGDF
                     RLQDIERTGTHVLTINEGAIGYGDNVLGRDISLILRRGECLGVIGPNGSGKTTLLKTI
                     LGKIPFLNGDVRWGSKVEIGYYAQQLEDLDDRNEIIMELRRVAPSTATAGELRSFLAK
                     FLFVGDDVYKHVRDLSGGEKGRLSLAKLIYSGVNVLVLDEPTNHLDIPSRESLEEALE
                     AYEGTILTISHDRFFLDRVATQILALDGQGKVEHYNGDYTEYHDWKAARARGEARPAA
                     SGEPGVSEARPRGPQAGSPLGVGRSGRATSAKHQSKSAVASRAMKSVSPAPGGSSVGS
                     KSVKVVKKPRDAQTVEAEIAALEKQAAEVSSEMSKPEIARDITKLVAANEAYEKAQAR
                     LAELYDEWERAEAATSSVKKKTSRR"
     gene            1498..1573
                     /locus_tag="VIT19_06415"
     tRNA            1498..1573
                     /locus_tag="VIT19_06415"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1531..1533,aa:Val,seq:gac)
     gene            1767..>3005
                     /locus_tag="VIT19_06420"
     CDS             1767..>3005
                     /locus_tag="VIT19_06420"
                     /inference="COORDINATES: protein motif:HMM:NF016845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HEY5838654.1"
                     /translation="MPEYLHPGVYIEEIEPGPRPIEGVPTSTAALLGEAERGSTMPKL
                     VTSYKDYQRWFGDVFNPTKFLPCAANGFFENGGQLAYIARVVGDGAKTASAEFGDFII
                     RAAGAGLWGTRVFAKISAGTTLGENETSVGFRVQLAYWSEGDAPFDAFLPENQQKFPR
                     PTLIEDFDDLVTDETSPDFYGKRLPFIDLDKGETNQGPESSALAILVRKEGVAAGARP
                     ADGAQTLADGDDVNAALGTDDFKGLAIAGGRPVQGLAALELDRYRDIALVHAPGVGFE
                     IAKEIVTHCEKLRFRFAVIDSAQGQDPGDPRNTINDSSYAAFYYPWIFTSDPRTGARK
                     LIPPGGHVLGVYARSDTERGVFKAPANEIVRGALALETDINDEIQNTLNPKGVNAIRS
                     FPGRGILVWGARTITSNADWK"
BASE COUNT          680 a          819 c          903 g          603 t
ORIGIN      
        1 tgcgaagacg gaagaattca ttcgcaagaa cctcgccggc caaaagacga agcaggccaa
       61 gtcgcgacga actatgttgc aaaggcttga gagagttgac gccgtgcgtg ggaatcaagc
      121 gtcgggagac tttcgtttgc aggacatcga gcgcaccgga acgcacgtgc tgacgattaa
      181 cgaaggcgcg atcggctatg gcgacaatgt cctggggcgc gacatttcat taattctgcg
      241 tcgcggcgaa tgtttgggcg tgattggccc gaacggttcc ggaaaaacga cgttgctgaa
      301 aacgattctg ggaaagattc cgtttctgaa cggcgacgtt cgttggggta gcaaagttga
      361 aattggttac tacgcgcagc agctcgaaga tctcgacgac cgaaacgaaa tcatcatgga
      421 gttgcgtcgc gtggcgccct cgactgctac cgccggcgag ttgcgatcgt ttctcgcgaa
      481 gttcttgttc gttggcgatg acgtttacaa gcatgtgcgc gatttgtccg gcggagagaa
      541 gggaagactt tcgctcgcga aattgatcta ttcaggcgtc aacgtgttgg tgctggacga
      601 gccgacaaac catctcgaca ttccatcacg cgaatctctg gaggaggcgc tggaggctta
      661 cgaagggacg atcttaacaa tcagtcacga tcggttcttc ctcgatcgcg tcgcgaccca
      721 gatactggcg ctcgacggtc agggcaaggt cgaacattac aacggcgact acactgagta
      781 tcatgattgg aaagctgccc gcgcgcgagg ggaagcacgg cctgcggcat cgggtgagcc
      841 cggcgtgtcg gaagcccgac cccggggtcc ccaagcgggc agcccgcttg gggtgggacg
      901 gtcagggagg gcaacttctg ctaagcatca atcgaaatcg gcggtggctt cgcgcgccat
      961 gaagtcagtc tcacccgcac cgggtggatc cagtgtcgga tctaagagcg tcaaggtagt
     1021 caaaaaaccg cgcgacgcac agaccgtcga agctgaaatc gcggcactcg aaaaacaggc
     1081 cgcggaagtc tcgagcgaga tgtccaagcc cgagatcgcg cgtgacatca ccaaactcgt
     1141 agcggcaaac gaagcgtacg aaaaggcgca ggcgcgtctg gctgaattgt acgatgagtg
     1201 ggaacgggcg gaagctgcta ccagttcggt aaagaaaaag acgtcgcgcc gttagatggt
     1261 ctgctactgt ccaggcggtc gtgtcctact ttgcgtgtct ttgcgcctta gcgccttggc
     1321 gtgaacccaa tagtagtcga cgaagcggca tttcacgcaa agacgcaaag tcgggaagaa
     1381 tcgccaaggc agaaatagga cactactcgt cagacgactt gcttgacttc tcgatcagcc
     1441 gtttgttact ttcgcgctct cgcaaagcag tcagtccttt agcgagtttc accccttagg
     1501 cacgtagctc agttggtaga gcacttccct gacacggaag gggtcagcgg ttcgagtccg
     1561 ctcgtgccta ccaaacctat caacaactta gcttgtataa gtttgctttc cggagttggt
     1621 ctgctataga aggccccgac cgcgggccaa gcctaaacta gagacagctt gcgagtgagc
     1681 ttccgcgatt aatactcgtg cttcagccat tccgcgacga gatcctcgaa tgtgaaactc
     1741 gtttacatta aacttggaga atcgtcatgc ctgaatacct acaccccggc gtttacatcg
     1801 aagaaattga gcctggcccg cgacctattg agggagtgcc aacgagtacg gcggccctgc
     1861 ttggcgaggc tgagcgtggc tcaaccatgc cgaagctggt cacgagctac aaggactatc
     1921 aacgttggtt cggcgacgtg ttcaatccga caaagttctt gccctgcgcg gccaacggct
     1981 ttttcgaaaa cggcggccag ctggcatata tcgctcgagt ggtcggcgac ggagccaaaa
     2041 ccgcttccgc agagttcggc gacttcatca tccgagcagc gggcgcgggc ctttggggca
     2101 ctcgcgtctt tgcgaagatt tcagccggta cgaccctggg tgaaaatgaa acgagcgttg
     2161 ggttccgtgt gcagttggcc tattggagcg agggcgacgc gccgttcgat gccttcctgc
     2221 cagaaaacca acagaaattt ccgagaccaa ccctgatcga ggacttcgac gatctcgtca
     2281 ccgatgagac gtcgcctgac ttttatggca agcgcttgcc gtttattgat ctcgataagg
     2341 gtgaaacgaa ccagggccct gagagttccg cgcttgcaat actagttcga aaagaaggcg
     2401 ttgccgcggg cgcgcgtcca gcggacggtg cgcaaacgct ggccgacggc gacgacgtta
     2461 atgccgcact gggaaccgac gacttcaagg gcctggcgat agccggaggg agacccgtcc
     2521 aggggctggc cgcgctggag ctcgatcggt atcgcgatat cgccctggtc cacgcgccag
     2581 gtgttgggtt cgaaatcgcg aaggaaattg ttacccattg cgagaagctg cgattccgtt
     2641 ttgccgtcat cgatagcgcc cagggtcagg atccggggga tcctcgcaat accatcaacg
     2701 acagcagcta tgcagcgttc tattacccgt ggattttcac atcggatccg cgcacgggcg
     2761 cccgcaaact tattccaccc gggggccacg ttctgggcgt gtacgcgcgc tccgacactg
     2821 agcgcggcgt atttaaggcg ccggcgaatg agatcgtgcg cggcgcactc gccctcgaaa
     2881 ctgacattaa tgacgagatc cagaacacgc tgaacccgaa aggcgtgaac gccattcgca
     2941 gttttcctgg ccggggcatt ctcgtttggg gggcccgcac catcacttcg aacgcagact
     3001 ggaag
//
LOCUS       DATDBY010000349         2005 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1043465, whole genome shotgun sequence.
ACCESSION   DATDBY010000349 DATDBY010000000
VERSION     DATDBY010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1043465"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            11..>2005
                     /locus_tag="VIT19_06425"
     CDS             11..>2005
                     /locus_tag="VIT19_06425"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEY5838655.1"
                     /translation="MKLLNEHPQLMTRISERYRFFLVDEFQDTNGLQRDLMMKLGLRQ
                     GANLFIVGDRKQSIYGFRGADVDVFREMTDAIKAAGGVEQPLHLNFRSQRPLIDCLNF
                     VLAKTFQPRNDVSPEQLPELGYVGHEASVAEREARDTPPLVEFLFSILPDRQSVDYSE
                     DEVQSRYESRDARERDASQLVARIQELAGGTHASRVLVRDEAGTPEACVPVNYGDSAV
                     LFRALTGVGIYESALRRGGIPYLTVQGKGFYQREEITDLIQLLRFLDNTTDEIALAAV
                     LRSPLGGISDNALFALRSAPLVGETTDGKKLPRRNLWRAVRQHREIQFIDEEEHAELD
                     RVAAFFGDMIERRSRYSIADLLRHAVAAADFMAVNAANFDGAHRIANVEKLFRLAEAF
                     EKSGELIRDFVHYVEKFEEIGGRETEGQIDKTANVVRLMTIHQAKGLEFPVVILPDLQ
                     RYASSQRDNSLFVLDRHRGFSVAVPDGRGGVVRGATFKELRQRAGWREEFESMRLLYV
                     AATRAEDRLIFSGAAAEKELKNLKETKREQWLAWVWQALELDEHPQTGVLEVGDGVQI
                     DLRVSREPAGSVGILPANSTVSSTIDPSQPLAEIFPLLRPVEAERGTTLRRFTITQLI
                     NFQRCPRQYYFERLLRTPGAEELAVWNDAEAPEPPANLTAT"
BASE COUNT          425 a          564 c          601 g          415 t
ORIGIN      
        1 gctccggacg ctgaagttac tcaacgagca cccgcaattg atgactcgga tttcggaacg
       61 ttaccgtttt ttccttgtcg atgagttcca ggacacgaac ggcttgcagc gtgatttgat
      121 gatgaagctg gggctgcggc aaggcgcgaa ccttttcatc gtcggcgacc gaaagcagtc
      181 aatttacgga tttcgcggcg cggatgttga cgtgttccgc gaaatgaccg acgcgatcaa
      241 agccgcgggc ggcgtcgaac agccgttgca tttgaacttt cgcagccagc gccccttgat
      301 cgactgtctc aacttcgttt tagcgaagac tttccagccg cgcaacgacg tttcgcctga
      361 acagttaccc gagctcggtt acgtgggaca cgaagccagc gtcgccgaac gcgaagcgcg
      421 cgatacgccg cctctggttg agtttctctt cagcatcttg cccgaccgcc aatcggtaga
      481 ttattccgaa gacgaagtcc agagtcgcta cgaaagccgc gacgctcgcg aacgtgacgc
      541 ctcccaactg gtcgcaagaa ttcaggaatt agctggtggt acgcacgcgt cccgcgtgct
      601 cgtaagagac gaagccggca cgccagaggc gtgcgtaccc gtcaattacg gcgacagtgc
      661 cgtgctgttt cgcgcgctca ccggcgtcgg catttacgaa agcgcgctac gtcgcggcgg
      721 gattccgtac ctcaccgttc agggcaaagg gttctatcag cgagaagaga tcaccgatct
      781 gattcaactg ctgcggtttc tcgataacac cacggatgaa attgcgttgg cggccgtgtt
      841 gcgctcaccg cttggcggta tttcggataa cgcgctgttt gcgctgcgtt cggcgcccct
      901 ggtgggcgag acaaccgacg gtaaaaagtt accgcgcaga aacctttggc gcgcagtgcg
      961 acagcatcgc gagattcagt tcatcgatga agaagagcat gcggaactcg atcgcgtcgc
     1021 agcgttcttc ggagacatga ttgagcgacg cagccgatac tcgattgccg acttgctgcg
     1081 tcacgcggtc gcggcggcag atttcatggc cgtcaatgcc gcgaacttcg acggcgctca
     1141 tcgaatcgcg aacgtcgaga aactctttcg actcgcggaa gcgtttgaaa aatcaggcga
     1201 gcttattcgt gactttgtgc actacgtcga gaagttcgaa gagatcggcg ggcgcgagac
     1261 tgaagggcag atcgacaaaa cagcgaacgt ggtgcggttg atgactattc atcaggcaaa
     1321 gggtctcgag tttcccgttg tcatccttcc cgatctgcag cgttacgcat cgtcgcagcg
     1381 cgacaattcg ctatttgtcc tggatcggca ccgaggattc agtgtggccg tgcctgacgg
     1441 ccgcggcggc gtcgtgcgcg gcgcgacctt caaagaactg cggcagcgcg caggttggcg
     1501 cgaagaattc gagagcatgc gacttttgta tgtcgccgcg acgcgcgcag aagatcgcct
     1561 gatcttctcc ggcgctgctg ctgagaagga attgaagaac ttaaaagaga cgaagcgcga
     1621 acagtggctc gcctgggtgt ggcaagcttt ggaactcgat gagcatccgc aaaccggagt
     1681 actggaggtc ggggatggcg tccagatcga tctccgcgtg agtcgcgaac cggctgggag
     1741 cgtgggcatc ctgcccgcaa attcgacggt ttcgtcaacg atcgatccat ctcagccgct
     1801 cgctgaaatt ttcccgctgt taagaccagt cgaagctgaa cgcggaacca cgctgcgccg
     1861 gttcaccata acgcagctca tcaattttca acgttgcccg cggcaatatt acttcgagcg
     1921 gcttttgcgc accccgggcg cggaagaact tgcggtgtgg aacgatgccg aagcgcctga
     1981 gccgcccgcg aatttaacgg cgact
//
LOCUS       DATDBY010000350         3255 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1517988, whole genome shotgun sequence.
ACCESSION   DATDBY010000350 DATDBY010000000
VERSION     DATDBY010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3255
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1517988"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..449)
                     /locus_tag="VIT19_06430"
     CDS             complement(<1..449)
                     /locus_tag="VIT19_06430"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838656.1"
                     /translation="MPDTTRSPRLTNESLATAAKILASRDPHLGSIYKTLGVPPMWGR
                     RPGFETLLRIVLEQQVSLISARAVFARLKANIDPFTPAAFISRDEQYLRSLGLTRQKA
                     HYCIQVAHAFTNGDLQGLSRLSDEDAHATLLRIKGVGPWTANIYLLMA"
     gene            complement(534..1472)
                     /locus_tag="VIT19_06435"
     CDS             complement(534..1472)
                     /locus_tag="VIT19_06435"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838657.1"
                     /translation="MEPNLQPVQTEHTPADGDHTLPFPFNQQTFCRYESIEQTIDAAR
                     VLIVDNLLRHEGDVSDVARSEWGKEIGSELKREREIASLAMQNIVTNVKRLVKQPATQ
                     ITHVSEIAEAVKEFKPDAIVLSGTLRDFDYYKPEILDTFKSFIRSTRLPVLAICGGHQ
                     LVGLSFGVRVVTLDQQEQEQRRTDRLTEYQYRFVRIVEPEDPIFEGIHNPESHRWHDY
                     TREGCILRVWQNHGLQLDAVPEGFTLLATSYLCRNQMMAKRSDGQLIYSVQFHLEKSF
                     EDWHKNPTRWEHPNESRDGRILFENFLRLALENREQ"
     gene            complement(1494..1985)
                     /locus_tag="VIT19_06440"
     CDS             complement(1494..1985)
                     /locus_tag="VIT19_06440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838658.1"
                     /translation="MDKSASDLALAIQATIGDSWLPGIYRDRILKMRTRAYEFPALPK
                     NAAPQIHHTLLGIELKVGRRRMLCPDLATARYLCVFARIGCKAVAIPYDITKISHVAD
                     ELESSWYRIMLLADESTRQRAEPFRARVRRLLIERVRAEITKAGAGARAPEFARSTKQ
                     RQR"
     gene            complement(1987..>3255)
                     /locus_tag="VIT19_06445"
     CDS             complement(1987..>3255)
                     /locus_tag="VIT19_06445"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HEY5838659.1"
                     /translation="AILTLLIATIWIETENLPAGEFHSLLLFATAGMMLMASAGDLVI
                     VFLGLEILSIATYVLAGFRRTDTRSNESSLKYFILGSFASAFLLYGIALIYGATATNT
                     LPGTTNIATIATRLDQSLYPPLLFAGIAMLLVGFGFKIATAPFHVWTPDVYEGAPTPV
                     TAFMAAGPKAAGFASFMRVFLFGFPIVTAAASTAGFAHAAWVGALAIMAALTMTIGNV
                     VAIVQTNVKRMLAYSSIAHAGYALVGFVAAGAATDPAQRNAAVTAVIFYLLTYAVMNM
                     GAFAIVTIIARKGDQQNEVEDYNGIGFRSPVLAFSLSIFLLSLLGMPLTAGFMGKIMV
                     FSAAVNQGYIWLVVLGVLNTAISAYYYLRLIIVMFFRERTTAWEPPRIPAMVAVALIL
                     TIVGVFYLGLFPGRVINAFSPNPGSPVVVR"
BASE COUNT          721 a          897 c          976 g          661 t
ORIGIN      
        1 gccatcagca agtaaatgtt cgcggtccac gggccgacgc ctttgatgcg cagcaatgtc
       61 gcgtgcgcat cttcgtcgct caacctgctg aggccttgca ggtcgccgtt cgtgaaggcg
      121 tgcgcgactt gaatgcagta atgcgctttt tgacgggtga ggccgagcga gcgcaggtat
      181 tgttcatcgc gcgagatgaa cgcggcaggg gtaaacgggt cgatgttcgc tttcaagcgc
      241 gcgaacacgg cgcgcgctga gataagcgaa acctgctgct cgagcacaat tcgcagaagt
      301 gtttcgaaac cgggacggcg gccccacatc ggtggaacgc caagcgtttt gtagattgat
      361 cccaagtggg gatcacgact ggcaaggatc ttggcggcag tggccaggct ttcgtttgtg
      421 aggcgtggcg agcgagtagt atcaggcatg gagcctccgg atccggttgc taccaccacc
      481 ccacgcgggc tgcccgcgcg gggaccccgg tccgctcgcg gtcctgacac tagctattgc
      541 tcgcgatttt ccaaagccag tctgaggaaa ttctcaaaaa ggattcggcc gtcgcgcgat
      601 tcgttcgggt gttcccaacg cgttgggttc ttatgccaat cctcgaaaga cttttccaga
      661 tgaaactgaa cggaatagat caactgaccg tcagagcgtt tggccatcat ttgattgcgg
      721 catagatatg acgtggcgag cagcgtgaag ccttcaggaa cagcgtcgag ctgaagtccg
      781 tggttttgcc agacgcgcag aatgcagcct tcgcgggtgt agtcgtgcca gcggtgcgat
      841 tccggattgt ggatgccctc gaagattgga tcttcaggtt cgacgattcg cacgaagcga
      901 tactggtact cggtgagccg atcggtgcgt cgctgttcct gctcctgctg atcaagggtc
      961 acgacgcgaa cgccgaaact aagcccgaca agttggtgcc caccgcagat ggccagcacc
     1021 ggcaaacgcg ttgacctgat gaagctctta aacgtgtcga ggatttccgg cttgtagtaa
     1081 tcgaaatcgc gcagtgtgcc gctcaggacg atcgcgtcag gcttgaattc cttcaccgct
     1141 tcggcgattt cacttacatg tgtgatttgg gtggccggtt gtttcaccag ccgtttgacg
     1201 ttggtgacaa tgttttgcat cgccagcgat gcaatctcgc gctcgcgctt caactcagag
     1261 ccgatttctt tgccccattc gctgcgcgcg acgtcggata catcgccctc atggcgcagc
     1321 agattgtcca cgatcagcac gcgcgccgcg tcgatcgttt gctcaatcga ttcgtaacga
     1381 cagaacgttt gctggttgaa gggaaaaggc agcgtatgat cgccatctgc cggcgtatgt
     1441 tccgtttgga ctggctgtaa gttcggctcc ataaaaatcg aagtgaaatt atatcatcgc
     1501 tgacgctgtt ttgtacttcg ggcaaactca ggagcgcgcg ctccagcgcc tgctttagtg
     1561 atttcggcgc gcactcgttc aatcagtagt cgcctcacgc gcgcgcgaaa tggctctgcc
     1621 ctttgacgcg tcgattcgtc cgccagcagc attatgcgat accaggaact ttcgagttcg
     1681 tccgccacgt gagagatctt tgtaatgtcg taggggatcg ccacggcctt acagccgatg
     1741 cgagcgaaca cgcaaagata acgcgcggtc gccagatcag ggcaaagcat tcgccgccgg
     1801 ccaactttca attcaattcc caacaacgtg tgatgaattt ggggcgcggc gttcttcggc
     1861 agggcaggga attcgtacgc gcgggtgcgc attttcagaa tccgatcgcg gtaaatccct
     1921 ggtaaccacg aatcgccgat cgtggcctgg atcgccaacg cgagatcgct cgctgacttg
     1981 tccatgttag cgaactacaa ccggactgcc cggattggga ctgaaggcat tgatcacacg
     2041 cccgggaaac aggccgagat agaacacgcc tacgattgtg agaatcagcg cgaccgcgac
     2101 cattgcggga atgcgcggcg gttcccaggc cgtggtccgt tcccggaaga acatcacgat
     2161 aatcaaacgc aggtagtagt aagccgagat tgccgtgttc agcacgccca gcacgacgag
     2221 ccaaatgtag ccctggttca cggctgcact gaacaccatg atcttgccca tgaagccggc
     2281 ggtcagcggc attcccagca gactcaagag aaagatggaa agcgaaaacg cgagcacggg
     2341 cgatctaaaa ccgatgccgt tgtaatcttc gacttcgttt tgctggtcgc ctttacgagc
     2401 gatgatcgtc acgatggcaa atgcgcccat gttcatcacg gcgtacgtaa gcaggtagaa
     2461 gatgaccgca gtaacggccg cgtttctttg ggctggatca gtggccgcgc cggcggcgac
     2521 aaatcccacc agcgcgtaac cggcatgcgc aatcgacgag taagccagca tgcgcttgac
     2581 gttggtttgg acaatggcga cgacgtttcc gattgtcatg gtcagcgcgg ccatgatggc
     2641 gagcgcgccg acccaggccg catgcgcaaa gcctgcggtg ctggcggcgg cagtcacgat
     2701 gggaaagccg aacaagaaga cccgcatgaa ggatgcgaag ccggcggcct tcggcccggc
     2761 ggccatgaat gctgtgaccg gcgtgggcgc gccttcataa acgtcgggcg tccacacatg
     2821 aaacggcgcg gtcgcgattt tgaatccgaa accgacgagc agcatcgcaa tcccggcaaa
     2881 cagcaggggc ggatacaagg actgatcgag gcgcgtggca atcgtggcga tgttcgtcgt
     2941 gccgggcaga gtgttggtgg cagtcgctcc gtaaatcagt gcaatcccgt acaacaagaa
     3001 cgctgacgcg aacgagccga gaatgaaata cttcagagac gattcattcg accgtgtgtc
     3061 agtacggcga aatccggcaa gcacgtaagt cgcgatcgaa agaatctcga gaccgaggaa
     3121 gacgattacc aggtcgccgg ccgaagccat cagcatcatt ccggcggtcg cgaacagaag
     3181 cagcgaatga aactcaccgg ccggcaggtt ctcagtctcg atccaaatcg tcgcaatcaa
     3241 gagggtgagg atggc
//
LOCUS       DATDBY010000351         2112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1500155, whole genome shotgun sequence.
ACCESSION   DATDBY010000351 DATDBY010000000
VERSION     DATDBY010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1500155"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..826)
                     /locus_tag="VIT19_06450"
     CDS             complement(<1..826)
                     /locus_tag="VIT19_06450"
                     /inference="COORDINATES: protein motif:HMM:NF016593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838660.1"
                     /translation="MPAEQSRFIARRKVDNLTAVLELTPATFEDFERETARGNVVPVT
                     RTVLADLQTPLGAFLRISGDASYAFLLESIEGGERLARYSFVGADPWMIARGRGGTTT
                     IQKEGRQETVERNAIEVLRATFREKKLARRPGLAPLCGGAVGYLGYDAASWFEPVLGR
                     SGHQSASDDAAWMFFRTVLAFDRVQQQIEITAVVFVAEAAGDREQLRALYDKAVRETE
                     RIDNLLGEPLTVPPSQPTIGQTTVHFQSNWPRPRFEAAVEKVKEHIAAGDCYQAVIS"
     gene            complement(1051..1854)
                     /locus_tag="VIT19_06455"
     CDS             complement(1051..1854)
                     /locus_tag="VIT19_06455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015351969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY5838661.1"
                     /translation="MSSIFSPGVLTGHVAFVTGGGTGITGGVARALSEAGANVALVSR
                     SMEHLEPAAAAINDTRAGMPALQGEAFAVAADVRQPDQVATAIAATVERFGRIDIVVN
                     GAAGNFLCKPEELSPNGFGTVVDIDLKGTFNVCRAAFDQLKQHRGQILNISATLHYLG
                     TPMQLHVSAAKAGVDALTRNLAVEWGRYGIRVNAIAPGPIEDTEGMKRLVPEAIKEKL
                     RNRVPLGRMGRIQDIETAAVFLCSDAASYINGAVLVVDGGHWLAANRLL"
     gene            complement(1864..2100)
                     /locus_tag="VIT19_06460"
     CDS             complement(1864..2100)
                     /locus_tag="VIT19_06460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838662.1"
                     /translation="MKYRKFWFVGAIALLCAIGFGISGHTKAVESERWEFQTQHGAPT
                     QLPGFNALGAAGWELAAVQCNDGNHCAFFFKRRK"
BASE COUNT          442 a          625 c          609 g          436 t
ORIGIN      
        1 gggagatgac tgcctgataa cagtcgccgg ccgcgatgtg ctctttcacc ttttcgaccg
       61 ccgcttcgaa ccgtggcctg ggccaattgg attggaagtg aacggttgtt tgtccgattg
      121 tcggctgact tggaggaaca gttagcggct caccaagcag gttgtcgatt cgctcagttt
      181 cgcgaacggc tttgtcgtaa agcgcgcgca actgttcacg atcgcccgca gcttcagcga
      241 cgaatacgac ggcagtgatc tcaatttgct gctgcacgcg atcgaatgcc agcacggtcc
      301 ggaagaacat ccaggcagca tcatctgaag ccgattgatg accagagcga ccaagcacag
      361 gctcaaacca gctcgccgcg tcatacccca ggtaacctac ggcgcctccg cacaaaggcg
      421 ccagtccggg ccgccgggcc agcttctttt cgcgaaacgt cgcgcgcagg acttcaatcg
      481 cattccgctc gactgtttcc tgccggccct ctttctgaat cgtggttgtg ccgccgcgtc
      541 cgcgagcgat catccaagga tcggcgccaa cgaatgaata acgcgcgagt cgttcgccgc
      601 cttcgatcga ttccagcaaa aacgcgtacg acgcatcgcc agaaatccgc agaaacgcgc
      661 cgagcggcgt ctgcagatcc gcgagcacgg tgcgcgtcac cggcacgacg tttccgcgcg
      721 cggtttcgcg ttcaaagtct tcgaaggtcg ctggcgtcag ttcgagcacg gcggttagat
      781 tatcaacttt gcgtcgggct ataaaccggc tctgttccgc cggcaaagaa ggcgcttata
      841 atgtgggcat gttcgaaacg gatgccgagc ttgaaccgga tccggtaatc gaattttaca
      901 agaaagatat cgatcgcacg ttgattcggg aaaacctgcg gctgacggtg gagcagcggt
      961 ttgacaagct catggccttg cagcgggtcg ctgaagagtt gtgctacata ggccgagagg
     1021 atttagtcat cgggttaaca gatgcggcgc tcagagcaat cgattggccg ccagccaatg
     1081 gccgccgtca acaacgagca ccgcgccgtt gatgtaactg gctgcgtctg agcaaaggaa
     1141 gaccgcggca gtttcgatgt cctggatacg gcccatgcgg ccgagtggca cacggtttcg
     1201 aagtttctct ttgattgctt caggcacgag gcgcttcatc ccttccgtat cttcgattgg
     1261 acccggcgct atcgcgttca cgcggatacc gtaacggccc cattcaaccg ccagatttcg
     1321 cgtcaacgca tcgacgccgg ctttggccgc ggaaacgtga agctgcatcg gcgtgccaag
     1381 ataatgcagc gtggcgctga tattcagaat ctgtcccctg tgctgcttga gctgatcgaa
     1441 tgcggcacga cagacgttaa atgtgccctt cagatcgata tcgacgactg tgccgaagcc
     1501 gttcggtgaa agctcctccg gtttgcaaag gaagtttccc gccgcgccgt tcacgactat
     1561 gtcgatgcgg ccgaagcgct caactgtagc ggcgatggcg gtcgccacct gatccggctg
     1621 acgaacgtcc gccgcgaccg cgaaggcttc gccttggagc gcgggcatcc ctgcccgcgt
     1681 atcgttgatc gctgcggccg caggctcgag atgttccatg ctgcggctaa ccagcgcgac
     1741 gttcgcacct gcttcggaga gtgcacgcgc aacgcctccg gtaataccgg tgccgccgcc
     1801 cgtgacgaac gcaacatggc ccgtaagaac accgggagag aagattgaac tcatgatgtc
     1861 tgactacttt cgccgtttga agaagaatgc acagtgattg ccgtcgttgc attgaacagc
     1921 cgcgagttcc cagccggcgg cgccaagagc gttaaagccg ggaagttgag taggcgcgcc
     1981 atgttgcgtc tgaaattccc agcgttctga ttcgactgct ttagtgtgac cgctgatgcc
     2041 gaatccaatt gcgcacagca gcgcgattgc gcccacaaac caaaacttcc tgtatttcat
     2101 cccgacacct ca
//
LOCUS       DATDBY010000352         2248 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2666488, whole genome shotgun sequence.
ACCESSION   DATDBY010000352 DATDBY010000000
VERSION     DATDBY010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2666488"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(159..761)
                     /locus_tag="VIT19_06465"
     CDS             complement(159..761)
                     /locus_tag="VIT19_06465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838663.1"
                     /translation="MKTRILLLLVITVSACASIVAQTDGELREVTLYWFAGAQTDRSR
                     SSVNFETGMRGVDRAGSYDLRYGGMIIGTPTKPGEVSKVLADWLGVLDCRSMMVDLGA
                     KQWQDFKETPMFPKPKTLEPPRPLGEPICAVNTSAGRTDFSPYRQYVVVNPGHVYLMR
                     LFRESKVRYVMFRVESHKSRDHCVLSWKLVKPPNVDDNEK"
     gene            complement(778..>2248)
                     /gene="asnB"
                     /locus_tag="VIT19_06470"
     CDS             complement(778..>2248)
                     /gene="asnB"
                     /locus_tag="VIT19_06470"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HEY5838664.1"
                     /translation="FDGALLFASEPKVLLAHPSVRPDLNLNALRQYLSFDYVPAPLSI
                     YEGISKLPAAHHLTLEDGRVEVRRYWKLSYKTQQPAPTVSEAASQLRDLLQDSVRMRL
                     VSDVPLGVLLSGGIDSSMVTALAVRASSETVKTFSISFAESSFDESEYARRVAAYLGT
                     DHHEERFSASLAANLVSEIGAWMDEPMSDPSLMPTYLLSRFTRKHVTVALGGDGGDEL
                     FAGYPMYFGHRMARAYQLIPRPLRVGLIERIVNGLPVKTKNLSFDYRARRFVTASHYD
                     EVARHHVWFGSFTPRDQDLLLSSEARAASDGDIYRDARRMFAECDSNDLTECMQSLDT
                     QLYLAEDILTKVDRASMAVSLEVRAPYLDPRVAEFAASLPSHYKLHGYTSKYILKRAA
                     KGLVPAFVGRRGKKGFGVPFAKWLKGELRPLARDLLSPERLRRGGLFNPEYVARLQDE
                     HERGVANHRKLLWTLLSFELWRESFVETPRRIETSVSSV"
BASE COUNT          524 a          682 c          602 g          440 t
ORIGIN      
        1 cgcgaatgcc gaaggggtgt ggcttgaaat aacgagctgt tcaggccgtc gtaaggatcg
       61 tagccggcaa acccctgatt gcggcaccat ttccataaat ctcgatgagc ggaattgaga
      121 tcaactgcca tttagtggcg cagcggcaga cacgcaaatc acttttcgtt gtcgtcgacg
      181 ttcggcggct tcacaagctt ccatgagagc acgcaatggt cacgcgattt atgactttcc
      241 accctgaaca tcacgtagcg tactttactc tcgcggaaga gcctcatgag gtagacgtgc
      301 cccggattga ctacgacata ctggcggtaa ggggaaaaat ctgttcggcc cgccgaagtg
      361 ttgacagcac aaataggctc gcccagcgga cgcggaggct ccagtgtttt tggcttaggg
      421 aacatcggcg tctctttgaa gtcctgccac tgctttgctc ccaaatcgac catcatgctt
      481 cggcaatcaa gcacgccgag ccagtcggcc aaaaccttgc taacctcccc aggcttggtg
      541 ggcgtcccaa taatcatgcc accatatctc aaatcatatg atccagcgcg atccacgccg
      601 cgcatacccg tttcaaaatt cacggacgat ctgcttctat ccgtttgcgc gccggcaaac
      661 caatacagcg ttacctctct gagttcgccg tctgtttggg cgacaattga cgcgcaggcg
      721 gaaaccgtga tcaccaataa aagaagaatt ctagtcttca tggtttgaac aaacctctta
      781 cacagaagaa accgatgtct cgatccggcg cggcgtctcg acaaaactct cgcgccacag
      841 ctcgaacgat agaagcgtcc aaagcagctt gcgatgattg gccacgcccc gctcatgctc
      901 gtcctgcaaa cgggcgacgt actccggatt gaacaagcca ccccggcgca aacgctcagg
      961 cgacagaagg tcgcgcgcca gcggacgcaa ctcgcctttc aaccatttgg cgaacggcac
     1021 accgaaacct ttcttgccgc ggcgcccaac gaatgcaggc actaaacctt tcgccgcacg
     1081 cttcagaatg tacttcgacg tgtagccgtg aagtttgtaa tgcgacggca gcgaggccgc
     1141 gaattcagcc acacgcggat cgagatacgg cgcgcgcact tccaaactca ccgccatgct
     1201 cgcccgatcg actttcgtca ggatgtcttc ggcgagataa agctgcgtgt cgaggctttg
     1261 catgcactcg gtcaaatcat ttgagtcgca ctcagcaaac atgcgacgcg cgtcgcgata
     1321 aatatcgcca tcactcgccg ccctcgcttc actgctcagc aacaaatcct gatcgcgcgg
     1381 cgtaaacgag ccgaaccaga cgtgatggcg ggcgacttcg tcgtaatgcg aggcggtcac
     1441 gaaccggcgc gcgcggtaat caaacgacag gttcttcgtt ttcaccggca gcccattcac
     1501 gatccgttcg atgagtccca cccgaagcgg tcgcggaatc agttggtacg cgcgggccat
     1561 gcggtgacca aaatacatcg ggtagccggc gaacaattca tcaccaccgt cgccgccgag
     1621 tgccaccgtc acatgcttgc gcgtgaagcg cgaaagcaga tacgtcggca tgagcgaagg
     1681 atcgctcatg ggctcgtcca tccacgcgcc gatttcactg acgagatttg ccgcgaggct
     1741 cgcgctgaat cgctcttcgt gatgatccgt gccgagataa gccgcgacgc gacgcgcgta
     1801 ctccgattcg tcgaacgagc tttcggcaaa tgagatcgag aaggtcttga ctgtttctga
     1861 agacgcccgc accgccagcg ccgtcaccat cgaagaatcg ataccgcccg aaagcaacac
     1921 cccgagcggc acgtccgaga cgagccgcat gcgcaccgaa tcctggagca aatcccggag
     1981 ctgcgatgca gcttccgaaa cggtgggcgc cggttgttgc gttttgtaac tcaatttcca
     2041 gtagcggcgg acttcgactc gaccgtcttc gagcgtcaga tggtgcgccg ctggcagctt
     2101 gctgatgccc tcataaatcg aaagcggcgc cggaacataa tcgaacgaaa gatactgtcg
     2161 cagcgcgttg agattcagat ccggtcgcac tgaagggtgc gcgagcagca ctttcggttc
     2221 ggacgcgaac agcaaagcgc catcgaac
//
LOCUS       DATDBY010000353         3982 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_213908, whole genome shotgun sequence.
ACCESSION   DATDBY010000353 DATDBY010000000
VERSION     DATDBY010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3982
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213908"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1492)
                     /locus_tag="VIT19_06475"
     CDS             complement(<1..1492)
                     /locus_tag="VIT19_06475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008063311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEY5838665.1"
                     /translation="MHNHSSSGARGAIDPVCGMTVNIETAAGSFEFEGKQYYFCSRHC
                     LETFRANPQSFVESGRNPTNRGPRAGRPRGVVAREGAELTLPRHSHPDLSSSLTVGSP
                     PDSTKREYTCPMHPEIRQVGPGSCPKCGMALEPVSAAPPTKIEYTCPMHPEIVRDAPG
                     RCPICGMALEPRTITLEEEENPELVDMTRRFWVSAVLSLPIFLIGMNDVLPGRPLERV
                     ASMDALGWIQFVLATPVVLWGGWPFFVRAWQSIVNVSLNMFTLIGLGVAVAYIYSVIA
                     KLFPDVFPDSFKEHGVVPVYFEAAAVITTLVLLGQVLELKARNRTGAAIRALLALAPK
                     TARRVHPDGSEEDVPLDQVHAGDLLRVRPGEKVPTDGTVVEGASSIDESMVTGESIPV
                     EKGAGDAVIGGTVNTTGSFIMRAERVGAETMLARIVQMVAEAQRSRAPIQKLADRVAG
                     IFVPAVIVVAIVTFLVWAFFGPEPRLAHGLINAVAVLIIACPCALGL"
     gene            1736..2500
                     /locus_tag="VIT19_06480"
     CDS             1736..2500
                     /locus_tag="VIT19_06480"
                     /inference="COORDINATES: protein motif:HMM:NF021507.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HEY5838666.1"
                     /translation="MKSQLLLVLLLFALFASGGCSRDKAPLPSTLVQEGSKSTDVGKP
                     RFTTIRVDARTERIELFLRDEAGQPFKHFDQLKSWLAGKNKQLRFAMNAGMYHEDLSP
                     VGLFVQDGKQVSRLNLSDGTGNFYLKPNGVFLVSESGPRIVESTEYPALAQGVRLATQ
                     SGPQLVRNGVLHPSINAASTSRLVRNGVGVSGHTILFVISEQPVNFYELATYFRDELH
                     CADALYLDGVVSSLYSTDLQRNDHRADLGPIVAVVK"
     gene            2583..2960
                     /locus_tag="VIT19_06485"
     CDS             2583..2960
                     /locus_tag="VIT19_06485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838667.1"
                     /translation="MRKLIIFTAITTFFYFMTGLVFFEGSFGGALVVKPYPTHQVAFG
                     GGEEGIWARYHPGQPPPWFMQKDLKVILSFDWEQGRPIWIDAYLWGYLATLLAWVALA
                     PIVAVKLIIRIRARLYSPPLSIR"
     gene            2968..3513
                     /locus_tag="VIT19_06490"
     CDS             2968..3513
                     /locus_tag="VIT19_06490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838668.1"
                     /translation="MIKNLKANLVSLALLLLVPLGSAQVFNASAAPSGEPQTVADFFL
                     LAPERVIGYDRRFREELLRGERRGTVIDIPNGYISWNASDNPEEFEFAIFRKSNGKYI
                     VAFSSPGDPGLYPSRFFLLSYDKGKWREVTKALLPVASDKRLDYKLPRRGRTIVVSRD
                     WRERYHLTWTNDRFRVKRVDK"
BASE COUNT          854 a         1152 c         1088 g          888 t
ORIGIN      
        1 ccagcccgag agcgcagggg caggcaatga tcagcacggc aaccgcattg atcaggccat
       61 gcgccagacg cggctcgggt ccaaagaacg cccagaccag gaacgtgacg atcgcgacga
      121 cgatcaccgc aggcacgaaa atcccagcga cgcgatcggc gagtttttga atcggcgcgc
      181 ggcttcgctg cgcctcggca accatctgca cgatgcgcgc cagcatggtc tcagcgccga
      241 cgcgctcagc gcgcatgatg aacgagccgg tggtgtttac cgttccgccg atcactgcgt
      301 cgcctgcgcc tttctcgacc ggaatcgatt cgcccgtgac catcgattcg tcgattgagc
      361 tggcgccttc gactacggtt ccgtccgtcg gaactttctc gccgggccgc acgcgcaaga
      421 gatcacctgc gtgtacttga tcgagcggca cgtcttcttc gctgccgtcg gggtgcacgc
      481 gccgcgcggt tttcggagcc agagccagca aggcgcgaat tgccgcgccg gtgcggttgc
      541 gcgctttcaa ttccaaaact tgtcccagca gaaccagcgt cgtgatcacc gcggccgctt
      601 cgaaataaac cggcaccaca ccgtgttctt taaacgaatc gggaaaaacg tcaggaaaga
      661 gtttggcgat gacgctgtag atgtaagcga cagccacgcc caggccgatc agcgtgaaca
      721 tgttgaggct cacgttaacg atcgattgcc acgcgcgcac gaagaacggc catccgcccc
      781 acagcaccac tggcgtcgcg agcacgaact gaatccaacc caacgcgtcc attgaagcga
      841 cgcgttccag gggacgaccc ggcagcacat cattcatgcc gatgagaaaa atcggcaggc
      901 tcagcacggc gctgacccaa aaccgccgcg tcatatcgac gagttcagga ttttcttctt
      961 cttcgagtgt gatagtgcgc ggctctaaag ccataccgca gattgggcaa cggcctggcg
     1021 cgtcgcgaac tatctcaggg tgcatcggac acgtgtattc gattttcgtc gggggcgcgg
     1081 ctgagacggg ctcgagtgcc atgccgcact tcggacaact gccgggacca acctgacgaa
     1141 tctccggatg catcgggcag gtgtactcgc gcttcgtcga atcaggcgga gacccgaccg
     1201 taagggagga tgaaaggtct ggatgagaat ggcgtggcag tgtaagttcg gcaccctccc
     1261 tggcgaccac cccacgcggg cggcccgcgc ggggaccccg gttggtcggg tttctgcctg
     1321 attcgacaaa actctgcgga ttcgcgcgga acgtttccag gcaatgccga ctgcagaagt
     1381 aatactgctt gccttcgaat tcgaacgatc ccgccgcggt ttcaatattc acggtcatgc
     1441 cgcagaccgg atcgatcgcg ccgcgggcac cagagctgga gtgattatgc acgtcttgaa
     1501 tcagacctag attagacgca agtagcgaca acgtctaaca tcgaaattcc aggctcaatt
     1561 tgaaatcact ttgcgtagcc caggcgttta cgcctgggaa gaagagagcg gttagtttca
     1621 aaagccccgt taatggggct ttgacagcct tctttttcct acccaggcgt aaacgcctgg
     1681 gctagagaaa cccctcggtg aaattaggca actaccaaat tcctgggctg aactcatgaa
     1741 gtcgcaactg ctactcgtct tattgctctt cgcgttgttc gcgtcaggcg gctgttcgcg
     1801 cgacaaggca ccgctaccgt cgactcttgt tcaggaaggc tccaaatcca cggacgttgg
     1861 gaaaccccgc ttcacgacaa ttcgagttga tgcgagaacc gaacgcattg aacttttcct
     1921 gcgggacgag gcgggacagc cgttcaaaca cttcgatcaa ttgaagtcct ggctcgccgg
     1981 taagaacaaa caactgcgct tcgcgatgaa cgccggaatg taccatgagg acctctcgcc
     2041 cgtcggcctg ttcgtgcagg atggaaagca ggtctcgcgt ctcaatctat ctgacggaac
     2101 cggcaacttc tacctgaagc cgaatggcgt atttttggta tctgagtccg ggccccgaat
     2161 agtcgagtcg actgagtatc cggccctcgc tcagggcgta cggctggcaa cccaatccgg
     2221 ccctcagttg gttcgcaatg gcgtccttca tccatcgatt aatgccgcgt caacttcccg
     2281 gctggtgcgc aatggcgttg gcgtctcagg ccacacaatc ctgttcgtga ttagcgagca
     2341 gccggtgaat ttctatgaac tcgccacata ttttcgcgac gaattacact gcgcggatgc
     2401 attgtatctg gatggggtag tttcgagcct ctactcgacc gacctgcaac gcaacgacca
     2461 ccgagcggat cttggcccaa ttgtcgcagt cgttaaatga cccgtgggaa ctcgcgttgg
     2521 cgcctgtgga cagcgcggtc gcgcaaatcc ttcgactggt gcgacgctta gctcctccaa
     2581 tcatgcggaa actaattatc ttcaccgcga taacaacttt cttctacttt atgaccggtc
     2641 tcgtcttttt cgaaggctcc tttggcggcg cgttagtcgt caagccttac cccacgcatc
     2701 aggtggcctt cggcggaggt gaggaaggca tttgggcccg gtatcacccg ggccaaccgc
     2761 caccctggtt tatgcagaaa gacttgaaag taatcttgag cttcgactgg gaacaaggcc
     2821 gtccaatctg gatcgacgca tatttgtggg gatatctggc gacgcttttg gcttgggtgg
     2881 cccttgctcc catagtcgca gttaaactta ttatcaggat tcgcgcgcgc ctctactcac
     2941 cgccgttatc gataaggtga aactattatg atcaagaatc tgaaagccaa tctcgtctcg
     3001 cttgctctgc tcttgttagt gccgcttggc agcgcacagg tatttaatgc atctgcggcg
     3061 ccatccggcg aaccccagac tgtcgcggac ttcttcctcc tggctcccga gcgcgtgatc
     3121 ggctatgacc gtcgattccg tgaggagctg ctgcgtggtg aacgtcgggg cacagtcatc
     3181 gacattccca atgggtacat ttcgtggaac gcgtctgaca accccgagga gttcgagttc
     3241 gccatcttca ggaagagtaa cgggaagtat atcgtcgctt ttagctctcc cggcgatccc
     3301 ggcttatacc cgtcccgatt cttcctgctg agttatgaca agggaaaatg gcgcgaagtc
     3361 accaaggcgt tacttccggt ggcgtctgac aagaggctcg attacaagct tccgcgccgg
     3421 ggccggacca tcgttgtgag tcgtgattgg cgcgagcgat atcatctgac atggacgaac
     3481 gacaggttcc gggtcaagcg agtagataag taaccaatga agaccgtccg actcctaagc
     3541 gcggcgctca ggatcatttc attatttacg ttcggcggga gtctgttttt cggctggctg
     3601 ttttatgttt tctatctgaa atgggttttc ctgtttgaga acggaaggta ttttgatccc
     3661 gtggacgaag tcgtctatca cgactccagt tcagtattag gaataatttc cttattcttg
     3721 ctcctctttg cgatagtcct ctggctactt gcttcaaaac ttagatcaaa tgccaccaga
     3781 cgatcttccg ctcagctacg gccacgatct taactaccgt cgtccagttg cgcgttcctc
     3841 ctggtaaccg ccaaactgct tttctgcaaa catgacgcta gctcgcggat cgctcttcga
     3901 cggtcaaagc aaagacaact gtcccgatca atccaatgac tccggctacg aggaatggta
     3961 cttcaggcgc aatcttccaa ag
//
LOCUS       DATDBY010000354         3186 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_418231, whole genome shotgun sequence.
ACCESSION   DATDBY010000354 DATDBY010000000
VERSION     DATDBY010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3186
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418231"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..504)
                     /locus_tag="VIT19_06495"
     CDS             complement(<1..504)
                     /locus_tag="VIT19_06495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838669.1"
                     /translation="MNLVTNYLGLPLKNPIVASSSPLSHSVDSIRRLEDAGASAVVMY
                     SLFEEQITFDSLYVDYYLRSGTNSYAESLDYFPEMENYNVGPDEYMNLIRRAKEAVDI
                     PIIGSLNGVSSGGWTNYAALIEDAGADALELNVYYVPTNVELTGQAVEDMYLDLLAQV
                     KSSVSVPV"
     gene            complement(748..>3186)
                     /gene="nifJ"
                     /locus_tag="VIT19_06500"
     CDS             complement(748..>3186)
                     /gene="nifJ"
                     /locus_tag="VIT19_06500"
                     /inference="COORDINATES: protein motif:HMM:TIGR02176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HEY5838670.1"
                     /translation="AMCKGVFDELKKAKPKNHFTIGINDDVTHTSLPYDPAFNTEPDN
                     QVRALFWGLGADGTVSANKNSIKIIGEETPNYAQGYFVYDSKKSGAMTVSHLRFGDRP
                     IHSTYLIQRANFIAVHQFQFLSSNDVLGAAEDGATLLLNSPYAPAQVWDQLPRSVQEQ
                     IIQKSIKLYTIDAYRVAKEKQLGNRINTIMQTCFFAISGVLSPDEAIARIKESIRKTY
                     GKRGEPVIRQNFAAVDAALEHLHEVPVPAQATNTGDLPRTVPEGAPAFVQNVTAEIIA
                     GRGDNLPVSAFPVDGTYPVGTSQWEKRNIAQEVPVWEPDLCIECGKCMLVCPHATIRA
                     KVCDEHDLVGAPAGFKHMPAKFRELPDKRYTIQVAVEDCTGCRLCVEVCPAKDKSNVS
                     RKALNMHPQLPLRDSERVNWDYFLKLPELNRNNGLTFGSVKNVQLLQPLFEFSGACSG
                     CGETPYIKLLTQLFGDRAIIANATGCSSIYGGNLPTTPYTTNPEGRGPAWSNSLFEDN
                     AEFGLGMRLALEHQNAYARDLVNRLREGIGESLAGSLLTGDQSTDSEINTQRELVAAL
                     RAKLEGGAITAGASPNEARDLLSVADALVKKSVWIVGGDGWAYDIGYGGLDHVMASGQ
                     NVNILVLDTEVYSNTGGQASKSTPMGAVAKFAAGGKPTAKKDLGMGAIRYGNVYVAQV
                     AMGANDTHTVKAFLEAEAHDGPSLIIAYSQCIAHGIDMAKGMHQQKLAVESGHWPLYR
                     YQPKLAAENKNPFQLDSHDPKIPLKDYIYTEGRYRMLQQSDSEVAKVLLAQAQESVNR
                     RWQQYKRMASDGAN"
BASE COUNT          679 a          893 c          852 g          762 t
ORIGIN      
        1 aactggaacc gaaacggatg atttcacctg ggccaacaag tcgagataca tgtcttcgac
       61 tgcctgtccg gttaactcta cattcgtggg aacataatag acattcaatt ccagcgcatc
      121 ggcgccggcg tcttcgatta acgcggcgta gttggtccag cctcctgatg agactccgtt
      181 gagactgcca atgatcggaa tatcgacggc ttcttttgca cgtcgaatca aattcatgta
      241 ctcgtcaggc ccgacgttgt aattctccat ttcgggaaag taatcgagag attccgcata
      301 gctgttcgtg ccgcttcgca ggtaataatc gacatacaaa ctgtcgaagg taatctgctc
      361 ttcaaacagc gagtacatga ctacggcgct ggcgccggcg tcttccaggc ggcgaatact
      421 gtcgacggaa tgcgaaagcg gagaggaaga cgcgacgatt gggttcttca ggggcagccc
      481 cagatagttt gttacgagat tcataatgtc ctctgagcct gcggagcagg tggtagcata
      541 aagccttcgg cgtgagcccc aggatcaggc aacatgaggt cctgagcccg tgaaatgggc
      601 gacagcgctt tcaaacttct tcggtgtttc aagaacggct cctctgtcac ccgcttcgcg
      661 ggttggattt attatggcgc taaccctggg gctgacgccc caggctttac gctatcgccc
      721 gctaacgcgg gcttcaaatc tttattctca attagcacca tcagacgcca tccgtttgta
      781 ctgttgccaa cggcggttga ccgactcctg cgcctgggcc agcagaactt tcgcgacctc
      841 cgaatcgctc tgctgcagca tgcgataacg cccttccgta taaatgtagt ccttgagcgg
      901 aatcttcgga tcgtgcgaat caagctgaaa aggattcttg ttttcggctg caagcttcgg
      961 ctgatagcga taaagcggcc aatggcctga ttcgaccgcc agcttctgtt gatgcatgcc
     1021 cttagccatg tcgatcccgt gggcgatgca ctggctgtag gcaatgatca gggacggacc
     1081 gtcatgggcc tcggcttcga gaaatgcttt gaccgtgtgc gtgtcgttcg cgcccatcgc
     1141 tacctgcgcg acatagacat tgccatagcg tatcgctccc attccgagat ccttcttcgc
     1201 ggtgggttta ccaccggcgg caaacttcgc cacggccccc atcggggtcg atttggaagc
     1261 ctgcccgcct gtgttggaat agacttcggt gtccagcacc agaatattta cgttctggcc
     1321 gctggccatg acatggtcca gaccaccgta accaatgtca taagcccaac catcaccacc
     1381 gacaatccag acgctctttt tcaccaatgc gtccgctacg ctcaggagat cgcgcgcctc
     1441 gtttggcgat gctccggcgg ttatcgcccc accttccagc ttcgccctta gagcggcaac
     1501 taactctcgt tgagtgttta tttcggagtc ggttgactga tctccggtaa ggaggctgcc
     1561 ggccagagac tcgccaattc cttcgcgcag tcgattcacc agatctctcg cgtaggcatt
     1621 ctgatgctcc agggcaagcc gcatccccag cccgaactct gcgttatctt caaaaagcga
     1681 attgctccag gccggaccgc ggccttccgg gttcgtggta tagggcgtcg tcggcaggtt
     1741 gccgccataa atactcgaac agccagtggc gttggcaatg atggcgcggt cgccaaacag
     1801 ttgcgtcaac aacttgatgt agggagtttc accacagcct gagcaggctc ccgaaaactc
     1861 aaagagcggt tgcagcaact gtacgttctt gacagagccg aacgtcagtc cattgttcct
     1921 gtttagctca ggcagtttta gaaaatagtc ccagttgacg cgttcactat cacgcagagg
     1981 caactgcgga tgcatattga gagctttgcg ggaaacgtta ctcttgtctt ttgccggaca
     2041 tacttcaacg cagaggcggc aacccgtaca gtcttccacg gctacctgga tcgtgtaacg
     2101 cttgtccggc agctcgcgga atttggcggg catgtgctta aagcctgccg gcgcgcccac
     2161 cagatcgtgc tcatcgcaaa ctttggcgcg aatagtggca tgagggcaca cgagcatgca
     2221 cttcccacat tcgatacaaa gatcgggttc ccacaccggc acctcctgcg cgatgttgcg
     2281 cttctcccat tgcgaggtgc ctaccggata ggtcccgtca acggggaagg cgcttaccgg
     2341 cagattgtcg ccgcgtcccg caatgatttc ggcagtaacg ttttgcacaa atgcgggtgc
     2401 accctccggc acggtccgcg gcagatcgcc agtgttagtt gcttgagctg gaaccggaac
     2461 ctcgtgcagg tgctcaagtg cggcatcgac cgccgcaaag ttttgccgta tgaccggctc
     2521 tccacgtttc ccgtaagtct tacggatgga ttccttgatc ctggcaattg cctcatcggg
     2581 cgagagcaca ccgctaatcg caaagaagca ggtctgcatg atcgtattga tgcgattgcc
     2641 gagttgtttt tccttagcca cccgataggc atcgatggtg tagagcttga tgctcttttg
     2701 aatgatttgc tcctggactg agcgcggcag ttggtcccaa acctgcgccg gcgcataggg
     2761 actgttcagc aataacgttg cgccatcttc ggcggcgccc agaacatcgt tggagctgag
     2821 aaactggaat tgatgtacgg ctatgaaatt cgcgcgctgg attaagtagg tgctgtgaat
     2881 tggacgatcg ccaaagcgca aatgcgacac cgtcatcgcg ccggactttt tcgaatcgta
     2941 aacaaaatag ccctgggcgt aattaggagt ctcctcacca attatcttga tcgagttttt
     3001 gtttgcgctg accgtgccgt cagcaccgag tccccagaac aatgcgcgca cctgattgtc
     3061 aggttcagta ttgaaagccg gatcatacgg aaggctggtg tgcgtcacgt cgtcgttgat
     3121 tccgatcgtg aagtggtttt tgggtttcgc tttctttaac tcgtcaaaca cacccttaca
     3181 catcgc
//
LOCUS       DATDBY010000355         6558 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2047320, whole genome shotgun sequence.
ACCESSION   DATDBY010000355 DATDBY010000000
VERSION     DATDBY010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6558
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2047320"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..397
                     /locus_tag="VIT19_06505"
     CDS             <1..397
                     /locus_tag="VIT19_06505"
                     /inference="COORDINATES: protein motif:HMM:NF013845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838671.1"
                     /translation="PMREQPPEFADRIKVFALNPPREELYGRINTRTDGHFDNGLVDE
                     VRTLLGEGVPANSNALGAHGYRRVVEYLRGERDLQSAIEQTKRDVRHYAKRQLTWFRR
                     EPGVQWLDGFGDDPQTQSHLLRLLEERAH"
     gene            484..777
                     /gene="hfq"
                     /locus_tag="VIT19_06510"
     CDS             484..777
                     /gene="hfq"
                     /locus_tag="VIT19_06510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007563033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006378 - mRNA polyadenylation [Evidence
                     IEA];
                     GO_process: GO:0016070 - RNA metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEY5838672.1"
                     /translation="MDSKTAPQNIQDGFLNLARREKMTVTIYLVNGAKLLGRIKSFDK
                     FSLIMETNTQEQLVFKHAISTISQSRRSTGELRHQPAPAAEPPVAPAEETSAS"
     gene            774..1457
                     /gene="tmk"
                     /locus_tag="VIT19_06515"
     CDS             774..1457
                     /gene="tmk"
                     /locus_tag="VIT19_06515"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEY5838673.1"
                     /translation="MKSVDPQHVNAPMGGAFITFEGIDGCGKSTQLRMLASELRVRGL
                     PVIATREPGGTPLGQRLRTALLDVKEEVDPLTELLVFAADRAQHVRKHLLPALERNQI
                     VLSDRYADATVAYQGAGRGFKPELIEEIVQLATDGLKPDLTLLFDLSVADAAIRTRKR
                     VKNKRTDRLDVENEDFHMRVRNAYVEIAKAEPERFRVIDARGSVDETQRRVMEIVIPF
                     LEERGLIGR"
     gene            1521..2597
                     /locus_tag="VIT19_06520"
     CDS             1521..2597
                     /locus_tag="VIT19_06520"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF024575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEY5838674.1"
                     /translation="MFSNLIGNEEVKSSLRRLLENGRLVGSLLFTGEEGVGKKLFALE
                     LAKILNCKTSRGVEACDECSSCKRISHSTFPPFNNDDDDKARLIWSEHADVAMVRPYK
                     QIIRVGPIRELEREANFRPFEGAGRLFIIEDADYMNDQAANALLKTLEEPEPTTHLVL
                     TTTNPSALPATIRSRCQTIQFAPSRAGEIEKFLIESKDTSPADAPLLARTSRGSLGRA
                     CAGDIDTYRERREAMMAVLAALTVDGDRAALLCSAEELAAIKDRDDYEQSLDVLEVLI
                     RDAWALSLGRPKESIVNIDLLHQLQQIGVDLRSSQAAAWLQQIEEIRGALEVNINRKI
                     ASDALLLSMSEPGRTQGPYSHWKP"
     gene            complement(2612..4225)
                     /locus_tag="VIT19_06525"
     CDS             complement(2612..4225)
                     /locus_tag="VIT19_06525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838675.1"
                     /translation="MKSKSRLFWLTIAFAACVFGVRLSSNSVETGFAANVDSDPVPIP
                     TPATTGSNAGKVTTNAGLTTVTFDTKFGNVRVNLPDDMRAGDTISGTLVSEPKGETPE
                     ERAKNGDEIKGLALEIDGRMVEPFNAPHAKERESVIQHTFWIHHRHENRIKPPPTATP
                     VTGPMATSESGGDPRFSIRLLTGDSAREEVGRITILYTPVFPTTPSGAVITPDPKITI
                     PSLGQQGRPIEILGPFDGNPSNTTLRYGPVGSSLQDFEKGPEDVSGGFGLIRPLAESP
                     RKVVLEVPANLIGPMELNVKDGTNQATGTHRNVGVRLSAPKTNLLKGEKTTLTTEVSG
                     LQAITRAVPLTLTSSGVITMEGGPFQQLVIEPSQVNASGVYSTTRKVTGIMAGGWGAT
                     ATVVTGRFNARLQDDTDPNRIFHFNSFTGEYMFACGGGSCRPGGSAGGTQTGGTPDKP
                     GETTLPGGTGPPPIVPPPPVTLTGTGKPTMKGCIITLSHNAPDRRVFAKLDACTKTGD
                     ASVETNSPKADIKITDKNTADNPAQPPPK"
     gene            complement(4433..5557)
                     /gene="ispG"
                     /locus_tag="VIT19_06530"
                     /gene_synonym="gcpE"
                     /pseudo
     CDS             complement(4433..5557)
                     /gene="ispG"
                     /locus_tag="VIT19_06530"
                     /gene_synonym="gcpE"
                     /inference="COORDINATES: protein motif:HMM:NF001540.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
     gene            complement(5639..>6558)
                     /locus_tag="VIT19_06535"
     CDS             complement(5639..>6558)
                     /locus_tag="VIT19_06535"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HEY5838676.1"
                     /translation="DPTWEAIESDGLLSPDQDLPLAVKRGDQILPLTIRPTPRTELGE
                     TAGMLEFTPDNGGYPVEVRAVTPGSPAAAGGLQVGDRIVVVGGQDVKSAAQVRGYIRE
                     RKAQPLDLTVVRNGETKKITVSAERLPGGLIGVVPADAFPIHRARPGASLSYAINSNI
                     RILRVTGQALGQVFSGKRSVRDTVSGPIGIFRVASASANEGGWAGVFVTLAFLSLNLG
                     IFNLLPIPVLDGGAIFLLLIEGALAKVGLSISRTIRERIQQVGFVMVILLMVFVITND
                     VIKQTALFRGSGDPSPTPAASPAQPGPTR"
BASE COUNT         1393 a         1882 c         1876 g         1407 t
ORIGIN      
        1 gccaatgcgt gaacagccgc ccgaattcgc ggaccgaatc aaagtgttcg cactcaatcc
       61 cccgcgggaa gaactgtacg gacgaatcaa cacgcgcact gacggccact tcgataacgg
      121 cctcgttgat gaagtccgca cgctgcttgg cgaaggcgtg ccggcaaatt ccaatgcgct
      181 gggcgcacat ggctatcggc gcgtcgttga gtacttgcgc ggagaacgcg atctacaaag
      241 cgcgatcgag cagacgaagc gcgacgtgcg gcactatgcg aaacgacagc tgacatggtt
      301 tcgacgcgag ccgggcgtcc aatggctgga cggcttcggt gatgatccgc aaacgcaaag
      361 ccacttgctc cgactgcttg aggagcgcgc acactgagct gagaaaaaac ttgtcacgtc
      421 gaatctcgtg ttatactctc acccctcttg tagattcgat cagtttggcc acgtcggagg
      481 atgatggatt ccaaaactgc tccacaaaac attcaggatg gattcctgaa cctcgcgcgc
      541 cgcgagaaaa tgacggtgac gatctatctc gtgaatggcg cgaaactttt ggggcgcatc
      601 aagagcttcg ataagttctc actgattatg gaaacgaaca cccaagagca actagttttc
      661 aagcatgcca tctcgaccat atctcagtcg cggcgttcga ccggcgaact tcgtcatcag
      721 ccggcgcccg ctgctgaacc tccagttgca ccggccgaag agacttccgc ctcttgaaat
      781 cagttgaccc gcaacacgtc aacgcaccta tgggcggcgc tttcattaca tttgaaggga
      841 tcgatggctg cggaaaatct acgcagctaa gaatgttggc cagcgaactg cgcgtgcggg
      901 gattgcccgt tattgcgacg cgcgagcctg gcggcacgcc gctcgggcag aggttgcgca
      961 cggcgcttct ggatgtgaag gaggaggtcg atccgctcac tgagttgctc gtctttgccg
     1021 ccgatcgagc gcaacacgtg cgcaaacatc tgctgccggc gctggagcga aatcagatcg
     1081 tgctgtcgga tcgctatgcc gacgcgacgg tggcctacca gggcgccggg cgtggattca
     1141 agccggaact gatcgaggag atcgttcagt tggcaacgga cgggctcaaa cctgatctca
     1201 ccttgctgtt tgatttgtcc gtggcagacg ccgcgatccg cacgcgtaag cgcgtgaaaa
     1261 acaagcggac ggaccggctg gacgtcgaga acgaagactt tcacatgcgc gtccgcaacg
     1321 cctacgtaga aatcgccaaa gccgagccgg agcgattccg cgtcatcgac gcgcgcggct
     1381 cagtcgatga gactcaacga cgggtgatgg aaatcgtgat cccgtttttg gaagagcgtg
     1441 gactgatcgg ccgctgaggt acgcacgcct ctggcgtgct accgcgacac cggcacgcca
     1501 gaggcgtgcg tacctaagtc atgttctcaa acctaatcgg gaacgaagaa gtgaagagct
     1561 cgctccggcg gctgctggag aacggccgtt tggtgggttc cctgctcttc actggcgaag
     1621 agggcgtcgg caaaaagctg ttcgccctgg aactggcgaa gattctgaat tgcaaaacta
     1681 gtcgcggtgt tgaggcgtgc gacgaatgct cctcatgcaa acgaatttct cactcgacct
     1741 ttccgccttt caataacgac gacgatgata aggctcggtt aatttggagc gagcacgcgg
     1801 acgtcgcaat ggtgcggccc tacaaacaaa tcatccgcgt cggaccgata cgtgaactgg
     1861 aacgcgaagc caactttcgc ccgttcgaag gagcgggccg ccttttcatc attgaagacg
     1921 ccgattacat gaacgaccag gccgccaacg ctttgttgaa gacgctggaa gagcctgagc
     1981 ccacaactca tctggttttg acgaccacca atccgtcggc tttgcccgcg acgattcggt
     2041 cgcggtgcca gacaattcag ttcgcgccaa gtcgcgccgg tgaaattgag aagttcctga
     2101 tcgagtcaaa ggacacttcg ccagcggacg ctccgctcct ggccagaaca tctcggggga
     2161 gtctcggtcg cgcatgcgcg ggcgacatcg acacgtatcg cgaacgccgc gaagcgatga
     2221 tggccgtgct tgccgccctc accgtcgacg gagatcgcgc tgcgttgtta tgttcggcag
     2281 aggaactggc cgcgattaaa gaccgcgatg attacgaaca atcgctggat gttttggaag
     2341 ttttgattcg cgacgcgtgg gccctgtcat tgggcaggcc gaaagaatcg atcgtgaaca
     2401 tcgacttgct gcatcaactc caacagatcg gtgtggactt aagaagttcg caggcggctg
     2461 cctggcttca gcaaatcgaa gaaatacgcg gcgccctcga ggtaaacatc aatcgtaaga
     2521 tcgccagcga tgctctcctg ctctcaatgt cagaaccggg ccgaactcaa gggccttact
     2581 cacactggaa accttaacgc agaaccgaag gctatttcgg cggcggctgg gctgggttgt
     2641 ccgcagtgtt cttgtccgtg atcttgatgt ccgcttttgg cgagttagtt tccaccgagg
     2701 cgtcgccggt cttggtgcac gcatcaagtt tggcaaacac gcgccggtcg ggcgcgttgt
     2761 gactgagggt aatgatgcag cctttcatcg tgggcttgcc ggtgcccgta agggtaacgg
     2821 gcggcggcgg aacgattggc ggtgggcctg taccgccggg cagcgttgtc tctccgggct
     2881 tatcaggtgt acctccggtt tgcgtcccgc ctgcggatcc gcccggacga cagctaccac
     2941 ctccacacgc aaacatgtat tcgcccgtga aactgttaaa gtgaaaaatt cgattcggat
     3001 ccgtatcgtc ctgcaagcgc gcgttgaacc tgccagtcac caccgtcgcc gtcgcgcccc
     3061 aacctccggc cataattcca gtaaccttgc gcgtggtcga gtaaacccca gaggcattga
     3121 cctgcgaggg ttcaatcacc aactgctgga acggaccgcc ttccattgtg ataacgccgc
     3181 tggacgtaag cgtgagcggg acggctctcg tgattgcttg cagcccgctt acctcagttg
     3241 tcaatgttgt tttttcgcct tttagcaggt tggtttttgg cgccgacaag cgcactccca
     3301 cgtttcggtg cgttccggtg gcctgattgg ttccatcctt gacgttcagt tccatcggtc
     3361 cgataaggtt ggccggaacc tcgagaacaa ccttgcgcgg cgactcagcc aatggcctga
     3421 tcaagccaaa gcctccggaa acatcttcgg ggcccttttc gaagtcctgc aatgaactcc
     3481 ctacggggcc gtatctcagg gtcgtatttg aagggttccc atcgaacggg ccaaggatct
     3541 caattggccg gccctgttgg cccaagcttg gaatagtgat tttaggatcg ggcgtaatca
     3601 cggcgcccga tggggttgtg gggaagactg gagtgtagag aatagtgatc cggccaactt
     3661 cttcgcgagc ggagtcgcca gttaacagac ggatcgaaaa tcgtggatcg cccccggact
     3721 cggaagtagc cattggacct gtgacggggg ttgccgtcgg agggggctta attcggtttt
     3781 cgtgcctgtg atggatccag aaagtgtgtt gaatcacgct ttcgcgttcc ttcgcgtgtg
     3841 gcgcgttaaa gggctccacc atcctgccgt caatttccaa agccagccct tttatctcgt
     3901 ccccgttctt tgcgcgctcc tctggcgtct ctcccttcgg ttcactaact agtgtgccgg
     3961 aaatcgtatc tccagccctc atgtcatcag gaaggttgac tcgaacgttg ccaaacttcg
     4021 tatcgaaggt gaccgtggtc aggcccgcgt tcgtcgttac cttgcccgcg ttacttccgg
     4081 tggtagccgg cgttgggatt ggaacagggt cgctgtcaac gttggcagcg aagccggtct
     4141 cgacagagtt gctggaaagg cgaactccaa acacacaagc cgcaaatgca atcgttagcc
     4201 aaaacagtcg ggatttactc ttcattttaa gaacctccgg agcggaatgc gttggcgccc
     4261 accggtatgg ttcgggcgcg ataaagacag aattgctcaa ccgcaatctg ttaagacgtg
     4321 acccttggct ggataagtgc ggaaatcgga taagagagca cagataccta tcaccatcgt
     4381 ccgtgacagt caatagttct tgttatgcgt gctgagaggt tagattcgcg ggctagccga
     4441 cgtttacgag ttctggcacg aagcgggtta acccggcatc gggactggcg gccttgcctt
     4501 cggccaaaag cttttcagtc tccatcacga acgcttcgac gatgtcttcg ccggcgactt
     4561 tgcgcatcgg tacgccgtct ttgaagatca tgccgacgcc gcggccaaac gtgattccca
     4621 attgcgagtc gtgcgcttcg ccaggcccgt tcacggcaca acccatgatt gagaggtgca
     4681 gcggttcctg aatatgagcc agacgtcttt caatctccgt cacaatctcg acaaagttat
     4741 cgacatccag acggccacag gtcggacatg cgaccactgt gacgccgcgc gttcgcaaac
     4801 cgagtgactt cacgatttcc caggcgacgc gcacttcttc ctgcggttcg gcggcgagtg
     4861 aaacgcgaat cgtatcgccg atgccctcgt tcaagagaat gcccaggccg atcgatgatt
     4921 tcaccgtccc ggtgaacgcc gtcccggctt cagtcacgcc gagatggaac ggataatcaa
     4981 ctttctcagc cagcagacgg taagcagcga cggtgcggtg aacatcggac gccttcagtg
     5041 aaatgattat gtcggtaaag tcgagatctt cgagaatccc gatgtgacgc agcgccgatt
     5101 caaccatcgc ctcgggcgtg gcggtgccat actttttaag cagatccttt tccagcgaac
     5161 cgccgttcac gccgatccga attgggacct tttgcgcttg ggccgcgcgc acgacttcga
     5221 cgatacgctc gtgttttccg atgtttccgg gattcagacg cagcttgtcg atgccggctt
     5281 ccaaggcgag caaagcgagc ttgtagtgaa agtgaatatc agcgacgagc ggaacttccg
     5341 ggacgcgctt gcgaatttct ttcagcgcga tcgccgcgtc gttgtcaggc acagccaggc
     5401 gcacaacctc gcagccggcg ctgaccatct cctcgatttg tttgacggtc tcatcgacgt
     5461 tggccgtgtc ggtcttggtc attgactgaa tgaccaccgg cgcgccgccg ccgatttgca
     5521 cgtgtttgac ttgtactgct ctggtcttcc gcatgaaatt ccgacgttgt ttagaggcgg
     5581 gcgctgcccg ccgaactgcg agggcaacgc cctcgtctaa actttcagcg ttatcttatc
     5641 acctcgttgg accgggttgg gcgggcgagg ctgcgggtgt aggacttggg tccccggaac
     5701 cgcgaaacag tgctgtctgc ttgatcacgt cgttcgtaat cacaaacacc atcaggagga
     5761 tgaccataac gaacccgact tgttgaatgc gctcgcggat cgtccgagag atgctgagcc
     5821 cgaccttggc cagcgcgcct tcgattagca aaagaaagat cgcgccgccg tccagcaccg
     5881 ggatcggcag caaattaaaa attccgaggt tcaaactcaa aaacgcgagg gtgacaaaga
     5941 cgcctgccca gccgccttcg ttagccgaag ctgaagcgac gcgaaaaatt ccgatcgggc
     6001 ctgagacggt atctctcacg gaacgcttgc ccgaaaatac ttgtcctaac gcctgacccg
     6061 tgacccgcag aatacgaata ttggaattga tcgcataact gagcgatgct ccgggtctcg
     6121 cccgatgaat tggaaatgcg tcggcaggga ctacaccgat caggccaccg ggaagacgtt
     6181 cggccgacac tgtgattttc ttagtctcgc catttcgcac aacggtgagg tcaagtggct
     6241 gcgctttccg ctcccggata tatcccctta cttgagcagc actcttcacg tcttgcccgc
     6301 cgactaccac tattcgatca ccgacctgta atcccccggc cgccgctggt gaccctggcg
     6361 tcacagcccg gacctcgacg ggataccccc cattgtccgg ggtgaattca agcatgcctg
     6421 ccgtttctcc aagttccgtg cgcggcgtgg gccgtattgt gagcgggagg atctgatcac
     6481 cgcgtttcac agctagagga agatcctggt caggcgacag caaaccatcg ctctcgatgg
     6541 cctcccatgt cgggtcat
//
LOCUS       DATDBY010000356         3626 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_206635, whole genome shotgun sequence.
ACCESSION   DATDBY010000356 DATDBY010000000
VERSION     DATDBY010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3626
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206635"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            238..2562
                     /locus_tag="VIT19_06540"
     CDS             238..2562
                     /locus_tag="VIT19_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838677.1"
                     /translation="MKTKLRSLRALPGLTAALLLTTSAVVAQPAPTPTQSPEATNTNT
                     KATTKASKPAKTESVPTSATTGEDAGDYTVTSTLEFGYRGIRVGGNVNKFKSDLNYKA
                     GPRLFDSSLMLKAKDGKGGLFDSLLVTSTGWGADPSGNVRIRMEKPQAYRFDGNYRRF
                     KYYRVLNNIVNPVWSFGLQPNPVSGFHSYNTRTQMGDFDLTILPKNEIISFNIGYSPE
                     RYTGPFFTTYSAGGNQFQLLANARSRANDFRVGAEGKLGPVDWTFLQGFRRFNDDTFT
                     DTVPLAINPASTAARLTSYARNEPAKGSVDFTRFSLHTLIAKKLDLTGRIVYSKAESS
                     FAFIENFTGVNWNPRVTGWPPTAIPRVPGPGTVTVAATPNTLNLGRYNITGSAERPSI
                     LFDFGATFLATDNFRLSNTFRVEDWDITGTAVFADFFSITRNLPATAGGGTRTDTVGF
                     SNLDATEITRYRKYLNTFEGDYQFSNRLGIHFGYRYGKRKIERFFDGYNLGSQGSLTP
                     PNARSTSAEFFDNHTHAIFAGFKARPAKEWTVYLDVEHGTADNAFTRIGNYDYTNVRA
                     KSRYVPNRKVILNLGMIVRNNANPSEIAGVSLENFGVSFKTRIFTSSLDIMPNSRFML
                     NLGYNYNWVNSESLIDYSYLSSTNSAIRGTSLYYVRNNFFYIESTSRLTPRVTFYSAY
                     RVNKDNGQGNRVSDPAATGARTLITSYPMSFQSPEARLSIKLHRRLDWNFGYQYFNYN
                     EDGLVRTFQGTPRAQNYHAHLPYMSLRLYFGRKE"
     gene            2665..2829
                     /locus_tag="VIT19_06545"
     CDS             2665..2829
                     /locus_tag="VIT19_06545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838678.1"
                     /translation="MKINPVGFTIFIIFFGAATLDAITTRSWLRSIFWLAMGVVFLIA
                     GALRKPVRTK"
     gene            2863..3339
                     /locus_tag="VIT19_06550"
     CDS             2863..3339
                     /locus_tag="VIT19_06550"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HEY5838679.1"
                     /translation="MNFDIRAKAKKDLGGPNSPPRRSFLDFLLGASALATLGAIVYPI
                     IRFIAPPQIVESAENSVVAAKINEIPPNSGKIFKFGNKPGILVRTAAGEMKAFSAVCT
                     HLDCIVQYRDDTKQIWCACHNGQYNLSGKNIGGPPPRPLEEFQVNTRGDDVVVTRT"
BASE COUNT          838 a         1031 c          976 g          781 t
ORIGIN      
        1 ctgcctgacc tgccacagcg tcgatcacgg cgttggggcg ttggaaccgg tcggaccgac
       61 gcacaaccag aatcagcaat accgggattg caccacgtgt cacgtgaaga tccacgggtc
      121 ccgttcgagc cctgtgttct tccgatagcg tcgtgagttc agcggcgagg acgatccgcc
      181 gctggtgccg gcgggcgtta ccccgcctcg aaacagatga gccaaaggat caatggtatg
      241 aaaaccaaat tgagaagtct gcgcgcgctg ccgggactga cagcggcact tctgctgacg
      301 accagtgccg tcgtggccca accggcgccg acgccgacgc agtctcctga agcaacgaac
      361 acaaatacaa aggcgaccac gaaggcgagc aagccggcga agactgaatc cgttcctact
      421 tctgccacta ccggcgagga cgctggcgat tacaccgtga cctcgacgct tgagtttggc
      481 taccgcggaa ttcgcgtcgg tggcaacgtc aacaaattca agagcgattt gaattacaaa
      541 gcggggcccc ggctgtttga ttcaagcctg atgctgaaag caaaggacgg caaaggcgga
      601 ttgttcgatt cgctgctggt gacctctact ggctggggcg ctgacccatc gggaaatgtg
      661 cgaatccgca tggaaaagcc gcaggcgtat cggttcgatg gaaactatcg ccgcttcaag
      721 tactatcgcg tcctcaacaa cattgtaaat ccagtgtgga gctttggcct gcaacctaat
      781 ccggtcagcg gatttcacag ctacaacacg cgcactcaga tgggcgactt cgatctcact
      841 attctgccaa agaacgagat catcagtttc aacatcggtt attcgcctga gcgttacacc
      901 ggtccattct ttacgacgta ttccgcgggc ggtaatcaat ttcaactgtt ggcaaacgcg
      961 cgctcgcggg ctaatgattt ccgcgttggc gccgaaggaa aactcgggcc tgtcgactgg
     1021 accttcctac agggctttcg tcgcttcaac gatgatacct ttaccgatac tgtgccgtta
     1081 gcgatcaatc ccgcgagtac ggcagcccga ctgacaagct acgcccgaaa cgagccggcg
     1141 aaaggaagtg ttgatttcac tcgcttcagt ctgcacacgc taattgcgaa gaagctcgac
     1201 cttaccgggc ggatcgttta cagcaaagcc gagtccagct ttgcctttat cgagaacttt
     1261 accggcgtta attggaatcc tcgcgtcacc ggctggcctc cgacggcaat tccgagggtc
     1321 cccggccccg gcaccgtgac cgtcgccgca acgccgaaca cgctgaacct gggtcgatac
     1381 aacatcaccg gctcggccga acggccaagc atcctgtttg atttcggcgc gacgtttctg
     1441 gcaaccgata acttccggtt gtcgaacacg tttcgagtgg aagactggga cattaccggc
     1501 accgctgttt tcgcagactt cttttcgatc acgcgcaatc tgccggcaac tgccggcggc
     1561 ggtacgcgca cggacacggt tggttttagc aatctcgacg cgaccgagat cacgcgatac
     1621 cgcaaatacc tgaatacctt tgaaggcgac tatcagttca gtaatcggct gggaatccat
     1681 ttcggatatc gctatggcaa acgcaagatc gagcggttct ttgacggcta caatctcggt
     1741 tcgcaggggt cgctgactcc gccaaacgct cgcagcacga gcgcggagtt ttttgacaac
     1801 cacacccacg ctatcttcgc tggattcaaa gcgcgcccgg caaaggagtg gacagtttac
     1861 cttgacgtcg aacacggaac ggccgacaac gcgtttacgc gcatcggcaa ttacgactac
     1921 acgaacgtcc gtgcgaagag ccgctacgtc ccgaaccgaa aagtaatcct gaacctggga
     1981 atgattgtga ggaacaacgc gaacccttca gagattgccg gagtatcgct cgagaacttc
     2041 ggcgtctcgt tcaagacgag gatcttcacg tcgtcactcg acatcatgcc caactcccgc
     2101 tttatgttga acctgggcta caactacaac tgggtcaaca gcgaatcgct gatcgactac
     2161 tcgtatctca gctcgacgaa ctcggccatt cgcggaacct cgttgtacta cgtgcggaac
     2221 aacttcttct acatcgagtc gacatccaga cttacgccgc gggtcacgtt ctattccgcg
     2281 tatcgcgtca acaaagataa cggccagggc aatcgggtgt cggacccggc ggcgactggc
     2341 gcgcgcacgc taatcacatc gtacccgatg agcttccaat cgcctgaagc gcggctgtcg
     2401 atcaagctgc atcgccggct cgattggaac ttcggctatc agtacttcaa ttacaacgag
     2461 gatgggttgg tgcggacgtt ccagggaacc ccgcgggcac agaattacca cgcgcatctg
     2521 ccgtacatgt ctttgcgact gtacttcggc cgcaaagagt agtcgaaaca tcagcgtcgt
     2581 agtcgagcga gctccagctc tggtttgatt ggccgcggct ggagttccct ttatggtaaa
     2641 aggcattcgc gccggaggtg agcgatgaag attaacccgg ttgggtttac gattttcatt
     2701 atcttctttg gtgcggccac gcttgacgcg attaccacgc gcagttggct gcgatcgatt
     2761 ttttggctgg ccatgggcgt agtgtttttg atcgccggcg ccctgcgaaa gccagttcga
     2821 acaaagtaag aaccggttcg gtcgtttttg gaggatgagc gagtgaactt cgacattcgc
     2881 gcgaaagcga agaaggatct cggcgggccc aactcaccac cccgccgcag ctttcttgat
     2941 ttcctgctgg gcgcgagcgc gcttgcgact ctcggagcga ttgtctaccc aatcatccgg
     3001 ttcatagcgc cgccgcagat tgtcgagtcg gcagaaaatt cagtcgtcgc cgcaaaaatc
     3061 aatgaaatcc cgcctaattc agggaaaatt ttcaaattcg gcaacaaacc gggaatcctc
     3121 gtgcggactg ccgcgggcga gatgaaagcc ttctctgccg tctgcacgca tctggattgc
     3181 atcgttcaat atcgcgacga caccaaacag atttggtgcg cctgtcataa cggtcagtac
     3241 aacctaagcg gaaagaatat cggcggtccg ccgcccagac ctttggaaga gtttcaggtc
     3301 aacacgcgcg gcgatgacgt agtagtcacg cgcacttagt cagtgctgat ccatttgtca
     3361 tttgacattt ttcatttgcc attcaggcat aacggttcag ctaatcccag ctgcgcgagc
     3421 gcgatgaatt tccctcgccg cggctgagaa gatgtccaaa tgataaatgc caaatgacaa
     3481 atcgaaaatg atttgggtag accgatgaaa ataggcgaca tacaactctg gcttgacgag
     3541 cgtctgtcta tcagctctgt cgcgaagctc gccgacaaga aagaagttcc ggttcatcgc
     3601 cattcgatct ggtattactt cggcgg
//
LOCUS       DATDBY010000357         2809 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2208044, whole genome shotgun sequence.
ACCESSION   DATDBY010000357 DATDBY010000000
VERSION     DATDBY010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2809
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2208044"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..577
                     /gene="thpR"
                     /locus_tag="VIT19_06555"
     CDS             <1..577
                     /gene="thpR"
                     /locus_tag="VIT19_06555"
                     /inference="COORDINATES: protein motif:HMM:TIGR02258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HEY5838680.1"
                     /translation="RCTVPDSLRTFIAIELPADVRARVAQHIACLRHELPDVRASWSR
                     EDNLHLTLKFLGNVSVADIPKVSNAIERATKPVSAFGVTVSGCGIFPPRGRPSVLWLG
                     TQAAGLQAFHAAIDQELDAAGFPRELRPFHPHLTLARLRQSQGARQLAELHKSLVFAP
                     VEFGVSEVVVFKSELLTQGPRHTAISRHRLV"
     gene            786..1292
                     /locus_tag="VIT19_06560"
     CDS             786..1292
                     /locus_tag="VIT19_06560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838681.1"
                     /translation="MKVAQPATDPGVSLKPSMSLTGGAVLTVFLSAVLIGYLKSPNPS
                     IPAVVIQERDANANSVSSSTRAGKSTESFTPETRIAARATRVRGNQDRRVATSKAPLK
                     VTPAVVRSPSPTIARPREVPQTSRTYPPAATIARRQEVPKASREKSPKVVALLKTTWK
                     VLKKPFDF"
     gene            complement(1342..1884)
                     /locus_tag="VIT19_06565"
     CDS             complement(1342..1884)
                     /locus_tag="VIT19_06565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838682.1"
                     /translation="MTLRTKFLFALTLFFAIGLLTAYACTSKPTVIPADPPLSQATPT
                     PATPAKLTAEDLKKLRWIEGTWRGTGVSQPAFFERYRWENDTTLAVDSFENEKLEKVT
                     DTTRFELTDGEFGGGSEGARYVATAVDDNAITFAPVVKARNWFVWKRESKDSWTAIIK
                     PLAKPDKPSKDIIYNMERLP"
     gene            complement(1942..2018)
                     /locus_tag="VIT19_06570"
     tRNA            complement(1942..2018)
                     /locus_tag="VIT19_06570"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1982..1984),aa:Pro,seq:cgg)
     gene            complement(2059..2751)
                     /locus_tag="VIT19_06575"
     CDS             complement(2059..2751)
                     /locus_tag="VIT19_06575"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEY5838683.1"
                     /translation="MDSLIELFHYLKDLLNPKIIIETLLVKGGIFVYLGLIFIVFAET
                     GLAVGFFLPGDSLLVVAGLFAATGKLNLAVLLVTLFVAAVVGDAVGYYTGARLGPRIF
                     KREKSLLFRPSHLLKAHAFYEKYGGKTIIIARFIPIVRTFAPIVAGAARMPYRDFVLY
                     NVAGGFLWVFSMILAGYFLGNLLKSKFGIDLDEHIEWVVIIVVALSLMPPLIEYLKAR
                     REKAARANKAEV"
BASE COUNT          646 a          820 c          719 g          624 t
ORIGIN      
        1 ccggtgtacc gtgcctgata gtctccgaac attcatcgcc atcgaactcc cggctgacgt
       61 acgggcgcgc gtcgcgcaac acatcgcttg ccttcgtcac gaactacctg acgtgcgcgc
      121 gagctggagc cgcgaagaca acctgcatct gactttgaaa ttcctcggca acgtttcggt
      181 tgctgacatt ccgaaagttt ctaacgcgat cgaacgagcg acaaaaccgg tgtcagcctt
      241 tggagtcacc gtttccggct gtggtatttt cccgccgcgg ggacgcccaa gcgttctgtg
      301 gctcggcacg caagccgccg gcctgcaagc ttttcacgcg gctatcgacc aggaactcga
      361 cgctgctggt ttccctcgcg agttgcgtcc gtttcatccg catctcacgc tcgcgcgtct
      421 gcgccagtct cagggcgcac gtcaactggc tgaacttcat aagagtctgg tattcgcacc
      481 ggtcgagttc ggtgtatcag aggttgttgt tttcaagagt gaacttctaa cgcagggtcc
      541 aaggcacacc gcgatctcgc gtcacaggct cgtttagaga atccggcccg cttttagttg
      601 tgtgtttctt cgaatttgtg tatgtttccg ttcggttctt tcccccaccc ctctctcaga
      661 acgttcagtc aacaggtgca atgatgaaac actgtccgat gtgccatttc actttcgccg
      721 acttccataa cgtctgcact tttgatggta cggagcttgt tccgtatgaa aagccccaat
      781 cgctaatgaa ggtggctcaa cctgctaccg atccgggagt cagcctgaaa ccgtcgatgt
      841 cactaaccgg tggggccgtg ctgactgttt ttctcagcgc ggtcctgatc ggctatctca
      901 agtcgccgaa cccctcgatt cccgccgtcg tcattcaaga acgtgacgcg aacgcgaact
      961 cagtcagcag ttcaactcgc gccggcaaga gcacggagtc attcactccg gaaaccagga
     1021 tagccgcacg agcaactcgt gtcagaggca accaggaccg acgagtcgca acttccaaag
     1081 caccgctcaa ggtgactccg gctgtcgttc gttcaccaag tcccactatt gcgcggccac
     1141 gagaagttcc acagacatcg cgaacgtatc cgccggctgc gactattgcg cgccgccagg
     1201 aagttccaaa ggcatctcgc gaaaagtcgc ccaaggtggt ggctcttttg aaaacaacct
     1261 ggaaagtttt gaagaagccg ttcgacttct aagaacgtga tgcgaatctt ccgggcgagg
     1321 tgggtattaa ctcatcgcgc atcagggcaa gcgttccatg ttgtagatga tgtcctttga
     1381 tggcttgtcg ggcttcgcga ggggtttaat aatcgccgtc cacgaatctt ttgactcacg
     1441 cttccaaaca aaccagttgc gcgctttcac caccggcgca aacgtgatgg cgttgtcgtc
     1501 caccgcagtc gccacataac gcgcgccttc gctgccaccg ccaaattctc cgtctgtcaa
     1561 ttcgaaccgg gtcgtatcag tgaccttctc gagcttctcg ttttcaaacg aatcgacggc
     1621 cagtgtggtg tcgttctccc accgataacg ctcaaaaaag gcaggctgac taactccggt
     1681 gccgcgccac gtgccttcaa tccaacgtag cttttttaaa tcctcggcag tcaatttagc
     1741 aggcgtagcc ggcgttggcg ttgcttgcga taaaggcggg tctgccggta tcaccgtcgg
     1801 ctttgaagtg catgcgtaag cggtcaacaa accgatggcg aagaacaacg tcagcgcgaa
     1861 caggaacttg gttctgaggg tcaagacgtt tctcctgaaa aacggaacgg ctgcccttgg
     1921 ggcagccgcc gtttaaacaa atggtcgggg cgagaggatt cgaacctccg acctcacggt
     1981 cccgaaccgt gcgctctacc aggctgagcc acgccccgac aagaactgaa tggattctat
     2041 gtgacgcgaa gtggcaggtc aaacctctgc cttatttgcg cgtgctgcct tttcgcgtct
     2101 ggctttcaaa tattcgatta acggaggcat caacgacagc gccacaacta tgatgacgac
     2161 ccattcgatg tgctcatcca aatcaattcc aaatttcgat ttcagcaggt tgccgagaaa
     2221 gtagccggcc agaatcatgc tgaaaaccca gagaaaaccg cccgccacgt tataaagaac
     2281 aaaatcccgg tatggcattc ttgccgcgcc ggcgacaatg ggcgcaaaag ttcgcacaat
     2341 cggaataaaa cgcgcgatga tgatcgtctt cccgccgtac ttctcgtaaa acgcgtgcgc
     2401 cttcaacagg tgactcggtc gaaacagtag agacttctct cgtttgaaaa tgcgtggtcc
     2461 caaacgcgcg ccggtgtagt atcccacggc gtcacccacg accgcggcca cgaacaaagt
     2521 tacaagtaac accgccagat tgagcttgcc ggtcgcggcg aacaggccgg cgaccaccag
     2581 taacgagtcg cccggcagaa agaacccgac cgccagacct gtttctgcga agacgatgaa
     2641 gatcagaccg aggtagacga aaatcccgcc cttcaccagc aacgtctcga taataatctt
     2701 cggattaaga agatctttca ggtagtgaaa tagttcgatt agcgaatcca ttgttcagat
     2761 ctgactacta agttgaccag ccatgctgtc cgattagcgg cacaaactg
//
LOCUS       DATDBY010000358         2045 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2469841, whole genome shotgun sequence.
ACCESSION   DATDBY010000358 DATDBY010000000
VERSION     DATDBY010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2469841"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(243..803)
                     /locus_tag="VIT19_06580"
     CDS             complement(243..803)
                     /locus_tag="VIT19_06580"
                     /EC_number="3.1.1.106"
                     /inference="COORDINATES: protein motif:HMM:NF001664.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HEY5838684.1"
                     /translation="MDADQKQQFLNDRVTVIVGDITTQDTDAIVNAANASLLGGGGVD
                     GAIHRAGGPEILEECREIRRSRFPNGLPAGEAVITTGGKLPALYVIHTVGPIYGEEGG
                     KEAELLANCYHNSLTLAVEKNLTSVAFPAISTGVFGYPQDEAAEVASRTIENFLGTDH
                     QLNEVRLVFFQPRDAEAFLANQKFSE"
     gene            complement(807..1229)
                     /locus_tag="VIT19_06585"
     CDS             complement(807..1229)
                     /locus_tag="VIT19_06585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838685.1"
                     /translation="MTDTKGREYCLVVEGAYLTESEAEHALRDPFIEDWVEAHGNFKI
                     HNMDDIQVTPGVTLGSLGVYMLDERVFEIASEDPERPLTEHKAKGVAEALRRQDMFDE
                     VNVEARDEEIAAGEVAAEEAVPEEAVAEEPAAEEATAD"
     gene            complement(1488..>2045)
                     /locus_tag="VIT19_06590"
     CDS             complement(1488..>2045)
                     /locus_tag="VIT19_06590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838686.1"
                     /translation="VANEISTTKEFIRSLPQGSRVMVGYITAGRLQVRQSFTTDLNRA
                     ANSLRIPLASTGASSFNPYVEVIDALKKFDPSWRGNNAVLLISDGLDVSRGFDATAAG
                     NTLDIDRTIKEANRRDVSIYSFYAPSVGLTSRNRLAASYGQSSLQRVSDETGGRAFFQ
                     GVSGFVTFDSHFRRLREELNRHYSS"
BASE COUNT          431 a          593 c          579 g          442 t
ORIGIN      
        1 ccggtttggt ttcaatttcg acttcaggat tcatattaga tcgttgagca aaagtaaggc
       61 ggccaacgcc gccattttca gctccgtagg agccgaatct ttatagcaca agcgccattc
      121 aaaaagttaa tgctccatga ggagcgacca atgtcgcgcc tcatggagca aaggtgatta
      181 gtttcgctgt ttggtacgca ccgctccgga gtgcggcacg ccggaggcat gcgtaccggc
      241 ctctactcgc tgaacttctg attcgccaga aacgcctcgg cgtcgcgcgg ctgaaagaac
      301 accaaacgca cttcgttcaa ctgatgatcc gtgccgagaa aattctcgat cgtccgggaa
      361 gcgacttcag ccgcttcgtc ttgcggataa ccgaacacgc cggttgagat cgcgggaaat
      421 gcgaccgagg taagattctt ctcaacggcg agcgtcagtg agttgtgata gcagttggca
      481 aggagttcag cttcttttcc gccttcctcg ccgtagatcg ggcccacggt gtgaatcacg
      541 taaagcgcgg gcagcttacc gccggtcgtg atcaccgctt cgccggccgg caatccattt
      601 ggaaaacgtg agcggcgaat ctcgcgacac tcttcgagga tttcaggtcc gccggcacga
      661 tggatcgcgc cgtcgacgcc accgccaccc aggagcgaag catttgcggc attcactatc
      721 gcgtccgtgt cctgcgtcgt gatgtcgccc acgatgacag tgacgcggtc gttgagaaat
      781 tgttgtttct gatccgcgtc cattggctaa tccgcggtcg cttcttccgc ggctggttcc
      841 tccgcgacgg cttcctccgg gacggcttcc tccgcggcta cttctcccgc ggcgatttct
      901 tcgtcgcgcg cttcgacgtt gacctcgtcg aacatgtcct gccgtcgcaa agcttccgcg
      961 acgcctttgg ctttatgctc agtcaaaggt cgttcgggat cttcgctggc gatttcgaag
     1021 actcgctcat caagcatgta caccccaagc gaaccgagcg taacgcccgg cgtcacttga
     1081 atatcgtcca tgttgtgaat cttgaagtta ccgtgcgcct cgacccaatc ttcaataaag
     1141 ggatcgcgca gagcgtgctc ggcttccgat tcagtcaggt aagcgccctc gacaacgagg
     1201 cagtattcgc ggcctttggt atcagtcatt ggtctggaaa gcgagatgtt ccgtgggcga
     1261 ccagaggtcg cgcagtagcg cagaaagagg gtgcagcttc tctagccgtc atgtgttagg
     1321 ccaatgcgtc gcgaatggcc cgaatatggg gcctaattta ccaccgctga gtgccagagc
     1381 gccagagttt tgatcgccca ggcagaagcg ccgcggaaca tcgaattccc gcggcgcctg
     1441 agattgccaa gtgagttgtt tagaggcggg cgttgcccgc cgacgtctta tgaagagtag
     1501 tggcgattca gctcttcgcg cagacggcga aagtgtgaat cgaaagtcac aaagccgctg
     1561 acgccctgga aaaaggcgcg gccgccagtt tcgtctgaga cacgctgcaa agagctttgg
     1621 ccataacttg ccgcgagacg gttgcggctg gtgagaccca ccgacggcgc gtagaacgaa
     1681 tagatcgaaa catcgcggcg attcgcttcc ttgatcgtgc gatcgatgtc cagcgtattg
     1741 ccggcagccg tcgcatcaaa accgcgagag acatccagcc cgtcggagat cagcagcacc
     1801 gcattgttac cacgccagct cggatcgaac ttcttcagcg cgtcgattac ttccacgtac
     1861 ggattgaacg acgacgctcc cgtgctggcc aacggaatgc gcagcgaatt cgcggcgcga
     1921 ttcaagtcgg tagtgaatga ctgccgcacc tgcaaacgac cggcggtgat ataaccaacc
     1981 atcacgcgcg atccctgcgg aagggaacga atgaactctt tggtcgtgct aatttcattc
     2041 gccac
//
LOCUS       DATDBY010000359         6862 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_820239, whole genome shotgun sequence.
ACCESSION   DATDBY010000359 DATDBY010000000
VERSION     DATDBY010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6862
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_820239"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VIT19_06595"
     CDS             <1..252
                     /locus_tag="VIT19_06595"
                     /inference="COORDINATES: protein motif:HMM:NF024959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5838687.1"
                     /translation="YWVHDLFAAVWGSPVLIDGKVYLGDEDGDVVIMQAGKTKKVLVE
                     INMGSSVYSTPVPANGVLYISNRNQLYALAEAKPVAAVK"
     gene            539..1654
                     /locus_tag="VIT19_06600"
     CDS             539..1654
                     /locus_tag="VIT19_06600"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEY5838688.1"
                     /translation="MVFGAGSIKRLGEVAAELQFRRTLLVSDRGMLASGHVDEALEPL
                     AKEGIEVARFHDFAENPDTAVIDAGCEFAKSHSIDSIIAVGGGSSLDCAKGINFVLTN
                     GGRMQDYVGYGKAEKAMLPMIAVPTTAGTGSEAQSYAVITDAETHAKMACGDAKASFR
                     LAILDPQLTISQPHAITATAGFDAIAHAVETYVTTRRNPFSEVFSREGWRLLNSQYER
                     VLESPGDLEARSAMQLGAHFAGVAIESSMLGATHACANPLTARYGTTHGAALAMLLPT
                     VVRWNKSAAGERYAEFARLAGLYSGSDNDQATEALARRLEQLAAAGGLQTSLSAAGIE
                     SEELPFLAAEAAKQWTGGFNPRAFDQIGALEVYRSAF"
     gene            1779..2954
                     /locus_tag="VIT19_06605"
     CDS             1779..2954
                     /locus_tag="VIT19_06605"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5838689.1"
                     /translation="MNEKVPTDDKLKMKSLLRSACCLLLTAFCLLLTAHGSLLTVAAQ
                     YTPADNWSQFRGNHSLTGVSQSTLSNNLKLLWTYEAGDSIESSAAIVGRTVFVGSQKG
                     ELVSLNLDNGQVYWKFSTGAPVGESSPAYSAGVVYIGDSAGWLNALNASNGQKLWAFK
                     TGSEIKSSPVVVGDRVLVGSYDQHLYCLSARNGSVLWKVRTDGPVHATPSIYDGMAFI
                     TGCDEVFRAIRISDGAQVFQIASGAYTGASPALLGGAAFYGTFNNDVLMVNLAQRRIA
                     WRYQHPSRKFPYYSSAAVTANRVVVGGRDKLVHGLNMSGSAAWTFATNARVESSPAVS
                     GNRVFVGSNDGRFYVLNLETGAKLWEFTAGAPLSASPAIANGRVIIGSQDGRLYCFG"
     gene            3112..4863
                     /locus_tag="VIT19_06610"
     CDS             3112..4863
                     /locus_tag="VIT19_06610"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5838690.1"
                     /translation="MITAQIDEPILPAKESTQRKPLRLWPGIIGAVLVALGWFVVPTA
                     IQRVAGPAMLTGVFGALVIAVWWLVFSRARWFERLGAVVLIIFALIGTKRLVHESIAG
                     GGMGYLLYVLSVPVVSLAFVVWAVATRRLTNGIRRVTLVAAVMIVCGGFLLIRTGGIT
                     AEFDNDLHWRWSLTPEQQLIAQAANEPTAAPAASVSAGTGVNWPGFRGPERDGVVRGT
                     RIKTDWSASRPVELWRRSIGPAWSSFAVQGDRIYTQEQRGNEEIVSCYNLNTGKPVWL
                     HRDAARFYESNAGPGPRGTPTLNNGRVYTLGATGIVNALNADTGAVIWSRNAASDTKI
                     KTPTWGFASSPLVVDDVVIVAAAGAMAAYDVDNGNPRWFGPADNSGYSSPHLATIGGV
                     KQVLMLNGIGLISFSATDGKELWRYVLPPGARIVQPAITAEGDILTNDGESSSLRRLT
                     TTSGPNGWAVTERWESSGLNPYFSDFVVHKGHAFGFAGSNIACIDLKDGNRKWKGGSY
                     GHGQLVLLSDQDLLLIVSEEGELALVKATPDVFTELGRFPAIKGKTWNHPVLAGDTVL
                     VRNGEEMAAFRLALVDR"
     gene            complement(5255..>6862)
                     /locus_tag="VIT19_06615"
     CDS             complement(5255..>6862)
                     /locus_tag="VIT19_06615"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter family protein"
                     /protein_id="HEY5838691.1"
                     /translation="AYLAVVLYIGIFAFRHTQGKEKAEGFFLANRQLGPFVFLFSLFG
                     TNMTAFAILGSSGHAFNNGIVTFGLMASSSGLVIPLTIFLIGTRVWALGKKYGFMTPV
                     QMFRDRWECTHIGTVISVVQAALLIPYIIIGIMGGGTTLNTVSGGVVPFWFGGAIVAM
                     VVMGYVFFGGMRGTAWVNTFQTILFLIFGAVALVVIGVGMGGYKNAAQQILAAPALAP
                     LFTRERISPYYFFSYTFIPLSAIAFPHILIFSLTAKKMAHFKKTVILYPLCIMAIWLP
                     CVFLGVMANRVTDVPQIRAKQEARATLARQGKTMAPETRDQFREQAAGDDVILRLLER
                     YAPLWLAGLLGAGIMAAVMASDSQILALSTMFTEDVFAFYGGKKRFGEAVQVQTGRIF
                     IVLITLVSYLVALRAPETIFELAIQYAFSGFAALSPLLIGALFWKGSTKWGALAVTMW
                     VAIAVVAVAIFQSVVPAPAPGPATVYWSVGGTELISRTPGGTAVFGFMPVVPMVLISS
                     LLMFVVSLVTAKPAATTIAKYFGDRKP"
BASE COUNT         1499 a         1930 c         2021 g         1412 t
ORIGIN      
        1 tactgggtgc acgatctatt cgcggcagtt tggggttcgc ccgtgctgat tgacggcaag
       61 gtttaccttg gtgatgagga cggcgacgtg gtcatcatgc aagccggaaa aacgaaaaag
      121 gtgctggtgg aaatcaacat ggggagttct gtttacagca cgcccgtacc ggccaatgga
      181 gtgctctaca tcagcaatcg caatcagctc tacgcgctgg cggaagcaaa accggtggct
      241 gcggtgaagt gattcggccg gtgtgatttt attgggctcc gttaggagcc ggatgtttat
      301 agagatcgtt tcgcaaagtg gatgaggtca gtaccgggag cggtagcgac cgggtctttg
      361 gagtgcggtg gcaagcgcag cgcgacaccg ctttggatgt ccgaaacgct ttctcttagg
      421 tttcaaccaa agcgccgtcg ccgcttcgct ctgccggcgc actccaaata agcggtcgct
      481 accgctcccg gtactgacat gaactatgca atccttcgat tttcaacctc gaacccgagt
      541 ggtttttggc gctggttcga tcaagcgact cggtgaggtt gctgccgaac tgcaattccg
      601 ccggactctg ctggtctcag atcgcggcat gctggcatct ggtcacgtcg atgaagccct
      661 ggagccgtta gccaaagaag gaattgaggt cgcccgcttt cacgactttg ccgagaatcc
      721 ggacactgca gttattgacg ccggctgcga gtttgccaaa tcacattcaa tagattcaat
      781 catcgccgtc ggcggcggca gttcgctgga ttgcgcgaaa ggaatcaact tcgtgctgac
      841 gaacggcggg cggatgcaag attatgtcgg ctacggcaaa gcagaaaaag cgatgctgcc
      901 gatgattgca gttcccacga ccgccggcac cggcagcgag gcgcagagct acgcggtcat
      961 caccgatgcc gaaactcatg ccaagatggc ctgcggagat gcgaaagcct cgtttcgact
     1021 ggcgatcctg gatccgcaac tgacaatctc gcaaccgcat gcgatcaccg ccaccgcggg
     1081 cttcgatgcg atcgcccacg ccgtcgaaac ttacgtaacg accagacgaa atccgttctc
     1141 cgaagttttt tcacgtgagg gatggcggtt gttgaatagc caatacgagc gcgtgctgga
     1201 aagtcccggc gaccttgaag cgcgcagcgc catgcagctc ggcgcccatt ttgcaggcgt
     1261 cgcaattgag agttcgatgc tcggcgcgac acacgcctgt gccaatcctt tgaccgcgcg
     1321 ctacggaaca actcacggcg ccgcgctggc aatgctgctg ccgaccgtgg tccgctggaa
     1381 caagtctgcg gccggtgaac gttacgctga gttcgcgcga cttgcgggct tgtattccgg
     1441 ttccgacaac gatcaggcaa ctgaggcgct cgcccgacgc ctcgaacaac tggcggctgc
     1501 cggcggcctg caaacaagtt taagcgcggc ggggatcgaa tccgaggagt tgccttttct
     1561 cgccgctgag gcggcgaagc aatggacggg tggatttaat ccgcgcgctt tcgatcaaat
     1621 tggagctttg gaggtttata gaagtgcttt ttgagaaagc atgggctgta attcacacct
     1681 ggcttcagcc aggtgtcgca gctgacacta ataccaggaa accgtttaaa cggtttcccc
     1741 tcttcatcgc aagtctaacc acccggctaa agccaggtgt gaatgagaaa gtaccgaccg
     1801 acgataaatt gaaaatgaag tctttgctgc gttctgcctg ctgcctactg cttactgcct
     1861 tctgccttct gctcactgct cacggctcac tgctcactgt cgccgcgcag tacacaccgg
     1921 ctgacaactg gtcgcagttt cgcggcaatc attctttgac gggagtatcg cagtcaacac
     1981 tctcaaacaa cctcaagctg ctttggactt atgaagcggg cgactcaatt gaatcgtcag
     2041 ccgccattgt ggggcggacg gttttcgtcg gttcgcaaaa aggcgagctg gtgtcgctca
     2101 atctcgacaa cgggcaggtc tattggaagt tcagcacggg cgctccagtc ggcgaatcgt
     2161 cacccgctta cagcgcaggc gtcgtttaca tcggcgattc tgccggctgg cttaacgcgc
     2221 tcaacgcttc aaacggacaa aagctctggg ccttcaagac tggaagcgag atcaaatcat
     2281 cgccggtcgt ggttggcgac cgagttctag tcggctcgta cgatcagcat ctttattgcc
     2341 tttcagctcg caacggatcg gttctttgga aggtccgcac cgatgggccg gtgcatgcga
     2401 cgccaagcat ttatgacggc atggcattca tcactggttg tgacgaagtt tttcgcgcga
     2461 ttcgaatcag cgacggcgcg caggtctttc agattgcatc cggcgcgtac acgggcgctt
     2521 cgccggcttt actaggaggc gctgcctttt atggcacgtt caataacgat gtgctcatgg
     2581 tgaacctggc tcagcggcgc attgcgtggc gctatcaaca tccgagccga aagtttccgt
     2641 actactcatc agccgccgtg accgcgaatc gagttgtggt cggcggacgc gacaagctgg
     2701 tccacggtct caatatgtca ggcagcgccg cctggacatt cgcgacgaac gcacgcgttg
     2761 aatcttcgcc ggcggtctcc ggcaatcggg tatttgtagg ttcgaacgac ggaaggtttt
     2821 atgtcttgaa tctggagacc ggagcgaaac tttgggagtt cactgccggc gcgcctctat
     2881 cagcatcacc ggcaatagcc aacggccgag tgatcatcgg cagtcaggat gggcggctct
     2941 actgtttcgg atgagtccgc gaagcggatg acagcgtaaa gctggggtgt aagccccaga
     3001 gtcggaacca cgacgagtcg ggcagcgagc gcatcatgaa ttccaccgcc gcgagtcttc
     3061 gcccaaaaac cgtgaacaaa cagatagttc gctggcgtat gcgtcaatga aatgattact
     3121 gcgcaaatcg acgaacctat tttgccggca aaggaatcga cgcagcgaaa gccgctgcga
     3181 ttatggccgg gcataatcgg cgcagtcctg gtcgcgctgg gttggtttgt cgttccgacg
     3241 gccatccagc gcgtggccgg gcccgcgatg ctgaccggcg tcttcggcgc actcgttatt
     3301 gcggtttggt ggttggtctt cagccgcgcg cgctggtttg aacgcctcgg ggccgtcgtc
     3361 ttaatcatct ttgccttaat cgggacgaag cgtcttgtgc atgagtcgat tgcgggcggc
     3421 gggatgggtt acctgctcta tgttctgtca gttccggtgg ttagcttggc attcgtcgtc
     3481 tgggccgtcg cgactcgtcg actcacaaac ggaattcgtc gcgtgaccct ggttgccgcc
     3541 gtcatgatcg tctgcggcgg attcctgctg attcgcaccg gcggcatcac agcggaattc
     3601 gataacgact tacattggcg gtggtcgttg acaccggagc agcagttgat cgcccaggcg
     3661 gccaacgagc cgaccgcggc gccggcagct tcggtatctg ccggaaccgg agttaactgg
     3721 ccaggctttc gcgggcctga gcgcgacggc gtcgtgcgcg gtactcgaat caagaccgac
     3781 tggagcgcgt cgcgtccggt cgagttatgg cgacgatcga ttgggccggc gtggtcatct
     3841 ttcgcagtcc aaggcgatcg catttacacg caggagcaac gcggcaatga agaaatcgtt
     3901 tcgtgctaca acttgaacac cgggaaacct gtttggcttc accgtgacgc ggcgcgattc
     3961 tacgaatcga acgccggccc aggtccgcgc gggacaccga cgctcaacaa cgggcgcgtg
     4021 tacacgttgg gagcgaccgg gatcgtaaat gcactcaatg ctgataccgg ggcggttatc
     4081 tggtcccgca acgccgcgtc tgacacaaag ataaagactc ccacctgggg gttcgcgagt
     4141 tcaccattgg tggtcgatga cgtcgtaatc gtcgcggccg ctggcgccat ggcagcttac
     4201 gacgtcgaca acggtaatcc gcgctggttc ggaccggctg acaactctgg ttacagctcg
     4261 ccacatctgg caacaattgg cggagtgaag caggtcttaa tgctcaacgg aatcggcttg
     4321 atcagtttct ccgcaaccga tggtaaggaa ctttggcgtt acgtcttgcc acccggagcg
     4381 cgcatcgtgc agccggcgat caccgcggag ggcgatattc tgacgaacga cggtgaaagc
     4441 agcagcctgc gccgtcttac tacgacaagc ggccccaacg ggtgggccgt aaccgaacgt
     4501 tgggagtcga gcggactaaa tccttacttc agtgatttcg ttgttcacaa gggtcatgcc
     4561 tttgggttcg ccggcagcaa tatcgcctgc atcgacctca aggacggcaa tcgcaaatgg
     4621 aaaggcggta gctatggtca cggtcagctt gttttgttat ccgatcagga cttgctattg
     4681 atcgtttcgg aagagggaga gctcgcgtta gtcaaagcga cgccggatgt gttcaccgaa
     4741 ctcggccggt tccctgcaat caaaggcaag acctggaatc acccggtgct ggcaggcgac
     4801 accgtgctgg ttcgcaacgg cgaagagatg gccgccttcc gtttggcatt ggtagatcgg
     4861 taacgaaact gtgcgatgtg gaatattttc ggaactggcg atagcgagcg gccgagtgat
     4921 catcggcagt caggatgggc ggctttactg tttcggatga gtccgcgaag cggatgacag
     4981 cgtaaagctt ggggcgtaag ccccaggatc gcgttgagag agaatcaaag agccccggga
     5041 gggggcgaca gcctcacatc aacaaatcta acggcagtaa tagttgagcc ctggaccgca
     5101 atcgtcggag tttcgattgc ttcgggctga cgcccgcttc gcgggctgga attttcttta
     5161 ccgtggttgc cctggggctc acgccccagg ctttacgctg acgccagctt cgctggctct
     5221 aactatctca agactgtgag gagcaatagt ttcctcaagg ctttcgatct ccaaagtatt
     5281 tcgcaatcgt cgtcgccgca ggtttagctg tgaccagcga tacgacaaac atcaaaagcg
     5341 acgagataag aaccatcggc acaaccggca tgaagccgaa gacggcggtg ccgccggggg
     5401 tgcgggaaat gagttctgtc ccgcccacag accaatagac tgtcgccggt ccgggtgccg
     5461 gtgcgggaac aacggactgg aagatcgcaa ctgcaactac cgcgatggca acccacatgg
     5521 ttaccgccag cgcgccccac ttcgtgcttc ccttccagaa cagagcgccg atcaacagag
     5581 gcgacagcgc cgcgaatcca gagaacgcat actgaatcgc taactcaaag atcgtctccg
     5641 gcgcgcgcaa tgcgaccaga taagagacca atgtgatgag cacgataaag atgcgaccgg
     5701 tctgcacctg cacagcttcg ccaaagcgct tcttgccccc ataaaaggca aacacgtcct
     5761 ccgtgaacat cgttgaaaga gcgagaattt gcgagtcgct cgccatcact gccgccatga
     5821 tccccgcacc aagcaagccc gcgagccaaa gcggcgcgta ccgctcaagc aagcgcagaa
     5881 tcacgtcatc tccggcagcc tgttcacgaa actgatcgcg cgtctcgggt gccatcgttt
     5941 tgccctggcg cgccagcgtc gcccgcgctt cctgcttggc gcgaatttgc ggcacgtccg
     6001 tcacgcgatt cgccatcaca ccgagaaaga cgcacggcag ccagatcgcc atgatgcaca
     6061 gcggatagag gatcactgtc ttcttgaagt gggccatctt cttcgcggtc agcgagaaga
     6121 tgagaatgtg cggaaaggcg atcgccgaca ggggaatgaa tgtgtagctg aaaaagtagt
     6181 agggcgaaat tcgttcacgc gtgaacagcg gcgccagagc cggcgcagcg agtatttgtt
     6241 gggcggcgtt tttgtagccg cccatgccga cgccgataac caccagcgcg accgccccga
     6301 agatcaggaa cagaatggtt tgaaatgtgt tgacccacgc ggtgccgcgc atgccgccga
     6361 aaaagacata acccatcacg accatcgcaa ctatcgctcc gccaaaccaa aacggaacca
     6421 ctccgccgct gacagtgttt aaagtcgtgc cgccgcccat gatgccgatg atgatgtaag
     6481 gaatcagcag cgcggcctgg accacggaaa tcactgtgcc gatgtgcgtg cattcccatc
     6541 gatcacgaaa catctgcacc ggggtcatga aaccgtactt cttgcccagc gcccaaacac
     6601 gcgttccgat cagaaaaatc gtcagcggaa ttaccagccc tgaagacgac gccatcagtc
     6661 caaacgtgac gatcccgtta ttgaaagcgt gacccgacga accgaggatg gcgaaggccg
     6721 tcatgttcgt gccgaacaac gagaagagga aaacaaatgg tccgagttgg cggttggcga
     6781 ggaaaaaccc ctccgctttc tcttttccct gcgtgtgccg aaaggcaaag attccgatgt
     6841 aaagaactac cgcgagatag gc
//
LOCUS       DATDBY010000360         2751 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2662432, whole genome shotgun sequence.
ACCESSION   DATDBY010000360 DATDBY010000000
VERSION     DATDBY010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2662432"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..794)
                     /locus_tag="VIT19_06620"
     CDS             complement(12..794)
                     /locus_tag="VIT19_06620"
                     /inference="COORDINATES: protein motif:HMM:TIGR00282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HEY5838692.1"
                     /translation="MKLLLIGDVVGKPGRAALLDRLQDLQEQNQIDFTVMNAENVAGG
                     FSITPAIADLLFGAGIDVMTSGNHIFDKHEVIDYIKKQPRLLRPANYPPITPGQGMWV
                     GDVKGTRIAVINLLGRVFMAPSDDPFRIGMELIDSLDRDVKVRIVDVHAEATSEKAAM
                     GWFLDGRVSVVYGTHTHVQTADERILHEGTAFITDLGMTGSYGGVIGMKKGDIINRFR
                     SPIHRKPDHSKSEVRICGVVVDVDEETGQARSIQRINVSHES"
     gene            complement(916..1101)
                     /gene="ssrS"
                     /locus_tag="VIT19_06625"
     ncRNA           complement(916..1101)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="VIT19_06625"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(1189..1524)
                     /locus_tag="VIT19_06630"
     CDS             complement(1189..1524)
                     /locus_tag="VIT19_06630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838693.1"
                     /translation="MIKQLISLGIAVALICCFCGISVYANGTDPRVPPVKTVTPAEKS
                     QAQEKLKADVTKLVADAKAGKLKMPAQHFPQPKRNNLSTGAKIGIIAGIGAAIVLIWV
                     LVTLADDDS"
     gene            complement(1637..1996)
                     /locus_tag="VIT19_06635"
     CDS             complement(1637..1996)
                     /locus_tag="VIT19_06635"
                     /inference="COORDINATES: protein motif:HMM:NF017016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEY5838694.1"
                     /translation="MSPEAIGLDRNTDAASSPTIKVEIYDQAYTVRSDGDPEYLKQLA
                     EYVDERMREISSGTLTVDSRKVAILAALYIADELHRLQKIHDQADEQLATRSGECSEM
                     LDRLLKAPRALDRAVAS"
     gene            complement(1996..2262)
                     /locus_tag="VIT19_06640"
     CDS             complement(1996..2262)
                     /locus_tag="VIT19_06640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838695.1"
                     /translation="MMVPLNGLEKFSHLEDKIYRTIELTKTLRQEKEELERQLANYRG
                     GAGDEQLVTDVQRLRAERELIRTKVEKILDAIGRIDPELAEAVR"
     gene            complement(2448..>2751)
                     /locus_tag="VIT19_06645"
     CDS             complement(2448..>2751)
                     /locus_tag="VIT19_06645"
                     /inference="COORDINATES: protein motif:HMM:NF015129.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838696.1"
                     /translation="VLYSQLPRFPSIVRDVSLLVDRKITRATLMQAIAGQRPSHFVRS
                     EFVGTYEGEGIPDDKRSLTFRLEYRADDRTLRDDEVDGIHRSVVEALKQQFNAEVR"
BASE COUNT          623 a          792 c          701 g          635 t
ORIGIN      
        1 cctactgacc ttcacgactc gtggctcaca ttaatccgct gaatcgaccg cgcctggccg
       61 gtttcttcat ccacatcgac gaccacgccg cagatgcgca cttcactctt cgagtgatcg
      121 ggcttgcgat gaatcggtga gcggaaccga ttgatgatgt cgcccttctt catgccaatc
      181 acgccgccat agctgcccgt catccccaaa tccgtaatga aagccgtgcc ttcatgcagg
      241 atgcgttcgt cggccgtttg cacgtgcgtg tgcgttccgt agacgacaga gacgcggccg
      301 tcgaggaacc aacccatcgc agccttctcc gacgtcgcct cagcgtgcac gtcaacgatc
      361 cttactttca cgtcgcggtc gagcgaatca atcaactcca ttccgatacg aaacggatcg
      421 tcggacgggg ccataaaaac ccggcccagt aaattgatga cagcgatgcg ggttcccttc
      481 acgtcgccaa cccacatgcc ctgccccggt gtaatgggcg gatagttcgc cggacgcaaa
      541 agtcgcggct gctttttgat gtagtcgatc acctcgtgct tgtcgaagat atgattgccc
      601 gacgtcatca catctatgcc ggcgccgaaa agaagatcgg caatcgccgg cgtgatcgag
      661 aaacctccgg cgacgttctc agcattcatg acggtgaagt cgatctgatt ttgttcttgc
      721 aggtcctgca aacgatcgag cagcgccgcg cgtccaggct tacccacaac atcgccaatg
      781 agcagaagct tcataaagac gtgaatagta aatggtgaat cgtaaataga caaaagccgt
      841 aaaccgaaaa tgagaatcgc aaatagatcc tatttacgat ttaccattca cgatttacgg
      901 ctcttgattg gcagaaggag caccgttggg ccgttccgaa gtcgtaattg aacctgagta
      961 atcaggtggg tggccttttt gtcaccgcaa cctgtcggcg tctcttaacg atgaagagac
     1021 gcactagctc gcgatgtcgg cctcccttgt gaacgacgtt ggctcaacca tggtaatcgg
     1081 tgacgagccc cgcagaacac ttccctctgc cgcgacggat attagcacaa cgaagccggg
     1141 cgttgttagc aacttgaaaa tgcttcgtgc cgccagagtc gcgcgttctc agctgtcatc
     1201 atcggccagg gtaaccagca cccagatgag aacaatagcc gcgccgattc cggcaataat
     1261 gccaatcttc gctcccgtcg agagattgtt tcgcttcggc tgaggaaagt gctgcgccgg
     1321 catcttgagt tttcccgctt tcgcgtcagc caccagtttc gtcacgtcgg ctttcagctt
     1381 ctcctgcgcc tgactctttt ccgccggcgt cacggtcttc actggcggca cccttggatc
     1441 ggtaccattc gcgtaaaccg aaatcccgca aaaacaacaa attagcgcga ccgctatccc
     1501 gagagaaatt aactgcttaa tcatcacccc tcctgaacgt tcaatgggtg caaatcacaa
     1561 aacacaacgc gacttgcagt catgtttaaa gctttgaccg cgacgatgac gatcatttcc
     1621 tcaggggaag ttaagtttag cttgccactg cgcgatccaa cgcccgcggc gccttcagca
     1681 aacgatcgag catctctgag cattccccgc tgcgggtcgc cagctgctca tcggcctggt
     1741 cgtgaatctt ctgcagtcga tgtaattcgt cggcaatata gagtgctgcg aggatcgcaa
     1801 ctttgcggga atcaacggtc agggtgccgg aagatatctc gcgcatccgc tcgtcaacat
     1861 actcagcgag ttgctttaag tattcggggt cgccgtcaga acggacggta taggcttgat
     1921 cgtaaatctc gaccttaatc gtgggggatg acgcggcgtc ggtgtttcga tctaatccga
     1981 tggcttcagg actcatcagc gcacggcctc cgcaagttca ggatcgatgc gaccgatcgc
     2041 atccaggatt ttctcaacct tggttcgaat cagctcgcgc tcggcgcgca atcgctgcac
     2101 gtccgtgacg agttgttcgt caccggcgcc gccgcgataa ttcgccaact gtcgctccag
     2161 ttcctctttc tcctggcgaa gcgtcttggt cagttcaatt gtgcgataga ttttgtcttc
     2221 gaggtgcgag aacttttcca atccgtttaa gggaaccatc attcgtctcc gctcggccgc
     2281 gttaggtcgg ggtgattatc cgcccatgcg gacgagagcg caagagataa gtaagtttca
     2341 agtctcaggt ttcaagtttc aagtctcaag tctttccgac ctgaggacct cacctaaact
     2401 ccgaacctgg acctgaaact tgaaacctga gacttgaaac ttgaaactta tcggacctcg
     2461 gcgttgaact gctgtttgag tgcttcgacg acgctccgat gaatcccatc aacttcgtca
     2521 tcacgcagag tacggtcgtc ggcgcgatac tccagtcgga atgttagaga gcgtttatcg
     2581 tcaggaatgc cttcgccttc gtacgtgccg acaaattcag atctcacaaa atgcgacggc
     2641 cgctggccgg caatagcttg catgagagtc gcgcgcgtaa tctttcgatc aaccagcagc
     2701 gacacgtcgc gcacgatcga tggaaagcgt ggaagctgcg aatagagcac c
//
LOCUS       DATDBY010000361         6033 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2661343, whole genome shotgun sequence.
ACCESSION   DATDBY010000361 DATDBY010000000
VERSION     DATDBY010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6033
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2661343"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1368
                     /locus_tag="VIT19_06650"
     CDS             <1..1368
                     /locus_tag="VIT19_06650"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5838697.1"
                     /translation="KIPITTSSEEARKAFLQGRDLNEKLLIQDSITHFDKAISLDPNF
                     AWAELSRANVSPTGNEFFDHLKKAVSLAGKASNGEKLLILSTEAGANGNPVKQKEYLD
                     QLIAAYPNDERANFALAGYHFGQQEMPQAIQYYKKATELEPKFSSAFNLLGYAYRQNE
                     EYANAEGAFKKYIELIPNDPNPYDSYAELLLKMGKFDDSITQYRKALSIDQNFINAHQ
                     GIAMALLYQGKGSEAAAELQKITDKARSDAERRTALFALTVVDVDSGKWDKALADVDQ
                     QYALGEKTNDVPGMTGDLQLKGNILLEMGKHDDAKAQFEKGLKMTEASSLSQDIKDNA
                     RLFHHYNLARVALGKKDLAAAKREGDAFRTGAEAKKNAAQMRQVHQLMGLIALEMKDY
                     EKAVSEFQQANQQNPYDLYRLCQAYQGKGDGAQAKTFCGKAANFNSLPAINYAFVRTK
                     AARSV"
     gene            complement(1570..4260)
                     /locus_tag="VIT19_06655"
     CDS             complement(1570..4260)
                     /locus_tag="VIT19_06655"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY5838698.1"
                     /translation="MATCPGCSASVSENTSHCPSCGAALLGTQATIRQPPPKEKSKAP
                     TSSRSTSTSSRGEGKFLAGTVLNERYRITGLLGRGGMGEVYKAEDLKLTQTVALKFLP
                     EHFAEDQAAHERFIGEVRTARQVSHPNVCRVFDIGEVDGAQFISMEFIDGDDLSSLLR
                     RIGRLPPDKALEIGRQLCAGLHAVHQAGILHRDFKPANVMIDGRGKARLTDFGLAGLE
                     SELKEGAIAGTPAYMSPEQIAGKELTPQSDIYSLGLVLYEVFTGKRAFAGDTIGELLR
                     KHKTSAPTTPSEVIKDIDPLVEKVILRCLEKDPRERPASALQAAMMLPGGNPLEAAIA
                     AGETPSPEMVAAAPKKGALQPAIAIACLATVALLFLFIAFYSEQVRHHEWIPIEKSPE
                     ALTERADSIVKKLGYTKAPIDTDYGFENEFFSYARTEQSPDHYERLRSGQPPVIYFWH
                     RSSPRYLEPWNDVSVFLNDPPNDVTGMTKVILDVRGRLLEFQAVPPQVKDKVAQTGEV
                     DWATLFSEAGLDIRNYRQTESNWTPPFFADKNLSWEGPHVDHAQIPVRIEAAAYQGKP
                     VYFQVVAPWDRPLREEETVWSARRRAAAVIVISVLLSVIIAAVFLARRNLRQGRSDTK
                     GAFKISLFVFLMALAAYLLSADHIPDLTKEIPLLFKMAGYSLLGAVMIGLIYLALEPY
                     VRRRWPSLLISWNRLLVGDWRDPLVGRDILVGGMLGLGHTAAIYVSTLLPIWTGGRAV
                     PNSGLNISYLESVRHLWATFLMQWPVAVFGSLFFLLLLVLLVIVFRKQWLATAVFWIL
                     VFAVTGLAFGTGGHWADLLASALIATITVVSLRFGLLAMISRAVFFDLSLHNPLTADL
                     SSWYFGNTIFAAVVLFGLATYGFYISIAGQKVFQRTLLEE"
     gene            complement(4670..4903)
                     /locus_tag="VIT19_06660"
     CDS             complement(4670..4903)
                     /locus_tag="VIT19_06660"
                     /inference="COORDINATES: protein motif:HMM:TIGR02574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module protein"
                     /protein_id="HEY5838699.1"
                     /translation="MQTELTEQAKKLSIPDRILLVEEIWDTIAEENQAFELTDAQKRE
                     LDRRLELARTTGGQDRAIGRTWDEIKAEFMKSR"
     gene            complement(5026..5745)
                     /locus_tag="VIT19_06665"
     CDS             complement(5026..5745)
                     /locus_tag="VIT19_06665"
                     /inference="COORDINATES: protein motif:HMM:NF025687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4386 domain-containing protein"
                     /protein_id="HEY5838700.1"
                     /translation="MLTQTSPRALARLTGLFFLLTILGGIVAQAFISQRLIDFSDAAV
                     TANNILSNKSLFTLGFTIYLIEMACQVTTATLLYQLLKPVNPTVALLAVLLELTGIGI
                     KIVARVFYIAPLWVLLPTASGASPILPGFTPEQVQAIALTLLKVNDQGAATALAFFGF
                     STPLFGYLIFRSKFLPRWLGLLVMVAGLGWLTFLYPPLGYRVFMIIAPIGLLSALVKI
                     LWLLIRGVDERKWKEQAGTAS"
BASE COUNT         1466 a         1610 c         1734 g         1223 t
ORIGIN      
        1 aagattccga tcaccacgtc ttccgaggaa gcgcgcaagg cttttctgca aggccgagat
       61 ctcaacgaga agttgctgat ccaggattcc atcacgcact tcgacaaggc aatctcgctc
      121 gatccaaact tcgcctgggc agagctgagc cgcgccaacg tcagtcccac cggaaatgag
      181 tttttcgatc acctgaagaa ggcggtgagt ctcgccggca aagcttccaa tggcgagaag
      241 ctgctcatcc tcagcactga agccggcgcc aatggcaatc cggtgaagca gaaggaatac
      301 ctcgaccagc taatcgcggc ttatccgaat gatgagcggg cgaactttgc cctggctggc
      361 taccacttcg gtcaacagga gatgccgcag gcgattcagt attacaagaa ggccactgag
      421 ctcgagccaa agttctcttc ggccttcaat ctgctcggct atgcgtaccg gcagaacgag
      481 gagtatgcaa acgccgaagg tgcgttcaag aaatacattg agctgattcc gaacgatccg
      541 aatccgtatg actcgtacgc ggagctgctt ttgaagatgg gcaagtttga cgattcgatc
      601 acgcagtatc gcaaggcttt gtcgatcgat cagaacttca tcaacgcgca ccagggcatc
      661 gcgatggctt tgctttacca gggcaaaggg tcggaagcgg cggccgagtt acagaagatt
      721 accgacaagg cgcgcagcga tgcggaacga cgcacggcgt tgtttgcttt gacggtggtg
      781 gatgtcgata gcggcaaatg ggacaaggcg ctggcagacg tcgatcagca atatgctctg
      841 ggagagaaga ccaacgatgt gccggggatg accggcgact tacagctcaa aggaaacatc
      901 ctgcttgaga tgggcaagca tgacgacgcg aaggcgcagt ttgagaaagg tctgaagatg
      961 acggaagcgt caagtctttc tcaggacatc aaggacaacg ctcggctgtt tcatcattac
     1021 aatctcgcgc gcgtggcttt gggcaagaaa gacttggcgg cggccaagcg ggaaggggac
     1081 gcgtttcgca caggcgctga ggcgaagaag aacgcggcgc agatgcggca ggtccatcag
     1141 ctcatgggct tgatcgcgct cgagatgaag gattatgaga aggcggtcag cgagtttcag
     1201 caagccaatc agcagaaccc gtacgatctg tatcgcttgt gccaggcgta tcaggggaag
     1261 ggtgatgggg cacaggcgaa gactttttgc gggaaggccg cgaactttaa ttcgttgccg
     1321 gccattaatt acgcgttcgt gaggacgaaa gcagcgcgtt cggtttagcg gtgagcagta
     1381 gcagagtggc cgaagtgcgc gaagcgcacg gcagcataaa gcccggggcg taagccccgg
     1441 gtggcgttgt gtttgaaatc atgagcccgc gaagcgggcg gcagaaggca gaaggcagac
     1501 ggcaggaggc agtaagcagg aagtcagtat cccgacgtgt cgggatagcg ggtgggttca
     1561 cgccaaggtt cactcttcca atagagttcg ctggaatact ttctgtccgg caatggatat
     1621 gtaaaagccg taagtcgcca aaccgaacag caccaccgct gcaaaaatgg tattgccgaa
     1681 ataccagctc gataaatcag ccgtaagcgg gttgtggagg ctcaagtcga aaaagaccgc
     1741 tcgcgaaatc attgccaaaa gtccgaatcg aaggctaacg actgtgatag tggcgattaa
     1801 tgccgacgcc agcaagtcag cccaatgacc tcctgtccca aacgccaaac cagttaccgc
     1861 gaacaccagt atccaaaata cggcagttgc cagccattgt ttcctgaaga ctatcaccag
     1921 caaaaccaga agcagcaaaa agaataaaga cccaaacacg gcgactggcc actgcattag
     1981 aaaagtcgcc caaagatgcc tgacactttc aagatacgaa atatttaagc cggaattcgg
     2041 caccgccctg cccccagtcc aaatcggtaa cagagtcgaa acataaatcg cagcggtatg
     2101 accaagcccc aacatgccgc cgaccagaat gtcgcgcccg acgagcgggt cgcgccagtc
     2161 gcccaccaaa agacgattcc aggaaattaa caaactcggc caacgccggc gcacgtaagg
     2221 ttcaagcgcg agatagatca atccaatcat caccgcgcca agaagcgaat atccggccat
     2281 tttgaacagg agcggaatct ctttggttag atcgggaata tggtcggcgc ttagcaggta
     2341 ggccgccaga gccatgagaa aaacgaaaag cgaaatcttg aacgcgcctt tcgtgtcgct
     2401 gcgcccctga cgcaaattgc ggcgggccag aaagactgcc gcgataatga cgctcaagag
     2461 aacggaaata acgatcaccg cggccgctct gcgacgcgca ctccagacgg tttcttcctc
     2521 ccgcaaaggc cggtcccacg gcgcgacgac ttgaaaatat acgggcttac cttgataggc
     2581 ggcggcttcg atgcggacgg gaatttgcgc atggtcaacg tgggggcctt cccacgacaa
     2641 attcttgtcg gcaaagaagg gtggcgtcca gttcgattcg gtttgacggt aattccggat
     2701 gtccagaccg gcttccgaga aaagtgtcgc ccagtcaact tcgccggtct gggcgacttt
     2761 gtctttgacc tgcggcggta cggcttgaaa ttcaagcaag cgtccgcgca catccaggat
     2821 gactttggtc attcccgtta catcattcgg cggatcattg agaaaaaccg atacgtcgtt
     2881 ccagggttcg agatagcgag ggctgctgcg atgccaaaaa taaatcaccg ggggctgtcc
     2941 gctgcggagt ctttcataat gatccggcga ttgctcagtc cgggcgtaac taaaaaactc
     3001 gttctcgaaa ccgtaatcgg tatcaattgg agcttttgtg tagccgagtt ttttgacaat
     3061 cgaatcggcg cgttccgtca aagcctctgg cgatttttcg atcggaatcc attcgtgatg
     3121 tctaacttgt tccgaataga aagcgatgaa gaggaagagc agagcaaccg tcgccaaaca
     3181 cgcgatagcg atggcgggct ggagcgcgcc cttcttaggt gcggccgcaa ccatctcggg
     3241 tgaaggagtc tcgccggcgg cgattgctgc ttcgagagga tttccgcccg gcagcatcat
     3301 cgctgcttgc agcgccgaag caggacgttc gcgcgggtcc ttttccaaac agcgaagaat
     3361 tactttttca accagcggat cgatgtcttt gataacttcc gaaggggtgg tcggcgcgga
     3421 ggtcttgtgc ttgcgcagca gttctccgat ggtatcgcct gcaaaggccc gcttgcccgt
     3481 gaaaacttca tagagcacca aaccgagcga gtagatatca ctctgcggcg ttaactcctt
     3541 acccgcgatc tgttcgggcg acatgtaggc gggcgtgccc gcaatagcgc cctctttcaa
     3601 ctcgctctcc aaacctgcga ggccgaagtc ggtgagtcgc gccttcccac ggccgtcaat
     3661 catcacattc gccggtttga agtcgcggtg aaggattccc gcctgatgaa cagcgtgaag
     3721 tccggcgcag agttgtctgc cgatctcaag cgctttgtcg ggaggaagcc tgccgatgcg
     3781 acgcagcaac gaactcagat cgtcgccgtc gataaactcc atggaaataa actgcgcgcc
     3841 gtctacttca ccgatgtcga acacgcgaca gacgtttggg tgcgagacct ggcgcgccgt
     3901 gcgaacttca ccgatgaatc gttcatgcgc ggcctggtct tccgcgaagt gttcgggcag
     3961 aaacttgagc gcgactgtct gagtcagttt gaggtcttcg gctttataga cttcacccat
     4021 cccgcctcgg cccagtaggc cggtgatgcg gtagcgctca ttgagtactg ttcctgctaa
     4081 gaacttgcct tcgccgcgcg agctggtgga agtggagcga gagctggtcg gagctttgct
     4141 tttttctttc ggcggcggct gacgaatggt agcctgcgtt cctaataatg ccgcgccgca
     4201 ggaagggcag tgggaagtat tctcagaaac tgaggctgaa caaccaggac aggtggccat
     4261 tggggcgcta gtttatagac ttacctgaaa cttacaaaat tatttttgag gatcactgct
     4321 tcctgctccc cggttgttgg agcatccacg ctgtgcgatt catagccctg ctattccact
     4381 cgcgacttcc agctttcagg atctcgacgc gaatggaaga ccgctgtgat gtgaatctct
     4441 tctccggtaa tttcataaac accgcgaacg ggaaacgccg aacaaccgcg cggctgagcg
     4501 ttctgtagac aatcggatac aagtgcgggc tgcgaacgat gcgcgtcaac gcgtcatcaa
     4561 tacattccat gaactggccg tctagatctt tgcgttggtg tgcgtaccat tggcgggctt
     4621 cagcgagttc agcttcggcg tcgggagtaa accgaatgag catctgcggt taacgcgact
     4681 tcatgaattc agctttgatc tcgtcccacg ttcgaccaat agctcggtcc tgacccccag
     4741 tcgttcgggc cagctccagc cggcgatcga gttctcgttt ctgagcgtcg gttaactcaa
     4801 aggcttggtt ttcttcggcg atagtgtccc agatttcttc gaccaaaagg attcggtcag
     4861 gaatactgag cttcttagcc tgttcggtta actcggtttg catggcggtc attatatcaa
     4921 agcagccaat ttgggcgaac ggtgagggag aatgatggag gttcagtcgc gggctcgcgg
     4981 catccctcgc acaatgcgtg cgcacgtggt tctcgggtgc ggctactacg atgctgtgcc
     5041 ggcttgttcc ttccatttgc gttcatccac cccgcggatc agcaaccaca agatcttaac
     5101 taaggcgctt aacagtccta tcggcgcgat tatcatgaac acgcggtaac cgagcggcgg
     5161 atacaagaac gtcagccagc ctaaacctgc aaccatcacc agcagtccca gccagcgcgg
     5221 caggaacttg gaacggaaaa tcaggtagcc aaagagcggg gttgagaagc caaagaatgc
     5281 cagcgctgtc gcggcgcctt gatcgttcac tttgagcaac gtgagcgcga tcgcctgcac
     5341 ctgttcgggc gtgaagcccg gcaagattgg cgacgcgcca ctcgccgtcg gaagtagcac
     5401 ccaaagcggc gcgatgtaga agacgcgcgc aacgatcttg atgccgatcc cggtgagttc
     5461 cagcagcacg gccaataaag ccacagtcgg gtttaccggt ttcagcaatt gatagagcag
     5521 cgtggctgtg gtgacctggc acgccatctc gatcagatag atggtgaagc ccagggtgaa
     5581 caggcttttg ttagacagga tgttgttcgc cgtcacggcc gcgtcagaga agtcaattag
     5641 cctttgactg atgaacgcct gggcgactat gccgcccagg atggtgagca gaaaaaaaag
     5701 gccggttagg cgggccagcg cgcgtggaga agtttgcgtg agcataccca cagattacgc
     5761 cgatggcgca gaaaggttca ggcaaaggag taaagggaga aagcgggagc agacgggtac
     5821 aagccagaaa ggtaacacct gcccaacgag gctaagttgg ggccgtcgct attgcccaat
     5881 gagatggttt cggatagcat ccgcgcagtc ctaatcacag taccaagaaa ttgcgctcag
     5941 cggtcaactc cctgacgatt gaccaccaac gtccactcac caacccattc cgtccactaa
     6001 ctaacggacg gcccgccaat tgaaaggaga ctg
//
LOCUS       DATDBY010000362         3141 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2661276, whole genome shotgun sequence.
ACCESSION   DATDBY010000362 DATDBY010000000
VERSION     DATDBY010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3141
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2661276"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..354
                     /locus_tag="VIT19_06670"
     CDS             <1..354
                     /locus_tag="VIT19_06670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838701.1"
                     /translation="ESPDSGYGLLVHGVRENNQFRDYGFLIYSGESPKYAIVQHKNST
                     ETKLVSWTATSTIRTGTTPNQLEVRIRDRRLDFYINGQFVTSITDSEDFLRGRVGFYS
                     SDTNEVAFDDLEISK"
     gene            365..1660
                     /locus_tag="VIT19_06675"
     CDS             365..1660
                     /locus_tag="VIT19_06675"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing serine/threonine-protein
                     kinase"
                     /protein_id="HEY5838702.1"
                     /translation="MRVTLRVLAGPYNGQEFVFDQHDTFLIGRSENAHLYLPEDRFFS
                     RHHCLLEIAPPRCFLRDLGSTNGTFVNGDRVQEVFLKSGDRLQGGQTVLEVDVQVEKQ
                     ALNAEAPTLTKPLEITIECVNCGRRECVQGSATNEPMTFICEECREELKRQPQPVPGY
                     EMIKLLGRGGMGCVMLARNEQTGGAVAIKTLLPEVAVTDQALRRFMREIDVAAALDHP
                     NIVRYIESGTHNGAVYLITEYVEGCDAARLADSRGGRMPYKEAIDVITQSLDALAYAH
                     GRGYIHRDIKESNILLTGAAPNYTAKLTDFGLAKSFTNTGMSGITMAGDMAGTFAYMP
                     PEQIKDFRNVKPTSDIYALGMTAYSLLAGDTALDVGPSGDMAAMVRAIFEGQIVPLRR
                     RAPEVPERAAEVIERALAKDPAHRWQSAAAMRTALMHVA"
     gene            1981..>3141
                     /locus_tag="VIT19_06680"
     CDS             1981..>3141
                     /locus_tag="VIT19_06680"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEY5838703.1"
                     /translation="MAQPRSGNTTGKTAPPPAARNRRVQPASVSPTAITEDFKEALAV
                     IRQNYIDGNKLDYNDVYKSSIFGMLRSLDPHSNYFDRQEFEDMLSDQRSEYFGIGASI
                     LNYAIGNSVDTYISATFQNSPASRAGLRYGDRIDAVDGVSMHGKGSAEVRDKIRGPRG
                     THVTVTVTRAATGKQEPVEIIRNAVPQPSVPDAYFIRPGVGYIDMTRGFNSDTDDGLQ
                     AALEYLHAEGMTSLVLDLRNNPGGLLDQAIYVARTFLPAGQIIMSQKGRNGMNDRIYT
                     SNKTNPDRVPLVVLINEYSASASEIVAGAVQDHDRGLIVGQTSFGKGLVQTIMRLDYG
                     AGMTLTSAYYYTPSGRLIQRDFSDGSWYNYIYRGGIARDNNNAPVQPTGPAMR"
BASE COUNT          689 a          916 c          901 g          635 t
ORIGIN      
        1 gaatcgccgg actccggcta cggtttgttg gtccacggcg tccgggaaaa caatcagttc
       61 cgcgactacg gttttctgat ctactccggc gaaagtccca agtacgcgat tgttcagcac
      121 aagaacagca ccgaaaccaa actggtaagt tggaccgcca ccagcactat tcgcaccggc
      181 acaactccga accaactcga ggtgcgcatt cgcgatcggc ggctcgactt ttacatcaac
      241 ggacaatttg tgacctcgat aactgattcc gaagattttc tgcgcgggcg cgtcggcttc
      301 tacagcagcg acaccaacga agttgcgttc gacgatctcg aaatcagcaa atgataattc
      361 gctgatgcgt gtcacgcttc gagttctggc cggcccgtac aacgggcagg agtttgtctt
      421 cgatcagcac gacacgtttc tgatcgggcg cagcgaaaac gcccaccttt atcttccgga
      481 agatcggttc ttttcccgcc atcattgttt gctcgagatc gcgccgccgc gttgtttcct
      541 ccgcgacctg ggctcgacta acggaacgtt cgtcaacggc gaccgggtgc aggaagtttt
      601 tctgaagagc ggtgatcggc ttcaaggcgg ccagacagtt ctcgaagtcg atgtgcaggt
      661 cgagaagcag gcactgaacg ctgaggcgcc cacgctcacg aagcctctcg agatcaccat
      721 cgaatgcgtc aattgcggcc ggcgcgaatg cgtccagggt tcagccacga acgagccgat
      781 gacgtttatc tgcgaagaat gtcgtgaaga gttgaagcgt cagccacagc ccgtccccgg
      841 ctacgagatg atcaagctgc ttgggcgggg cggcatggga tgcgtgatgc tggcgcggaa
      901 tgaacagacg ggcggagcgg tcgccatcaa aaccctgctg cctgaagttg ccgtcactga
      961 tcaggccctg cgtcgcttca tgcgcgagat cgacgtggcc gcggcgctcg accatcccaa
     1021 catcgtgcgt tacatcgaga gcggaactca caacggcgcc gtgtatctca tcacggaata
     1081 tgtcgaaggt tgtgacgccg cgcgactggc cgattcgcgg ggcggacgca tgccgtacaa
     1141 agaagccatc gatgtcatca cccagtcgct ggacgcactg gcgtacgcgc acggccgggg
     1201 ctacatccat cgggacatta aagagtcgaa cattctgctg accggggcgg ccccaaatta
     1261 caccgccaag ttgacagact ttggtctcgc gaagagcttc acaaacaccg gcatgagtgg
     1321 aatcaccatg gccggagaca tggccgggac tttcgcatac atgccgccgg aacaaatcaa
     1381 agacttccgt aacgtcaaac caacctcgga tatctacgcc ctgggcatga cggcgtacag
     1441 cctgctcgcc ggcgacaccg ccctggacgt gggcccgtca ggcgacatgg ccgctatggt
     1501 ccgcgctatt ttcgaaggcc agatagtgcc tttgcggcgc cgcgcgcccg aagttcccga
     1561 acgggcggcc gaagtgatcg agcgcgcttt ggcaaaagat cctgcccatc gctggcaatc
     1621 cgccgcggcg atgcggacgg ccctgatgca tgtggcgtaa aagagggact ttggcctttg
     1681 gtcttaggtc tttggtgttt cgacactaac tcggaccaga aaaccaggat ctgagacctg
     1741 agatctaagt cccaaggcca aagtacaaag accctctttc ccaaagcaaa ccttgcccgc
     1801 tcttttcgca tccgttaaga ttgtaaacga gcacgcgtcg gtggtcggtg tggcagctcc
     1861 ccacattcag ttcttcgctt cgattttcaa cgcagcatca tgaggttttc agtgaagcac
     1921 aagatttctg tagcactcgc aaccctaatt cttttagccg tcactttgcc aggcttcgtt
     1981 ttggcgcagc ctcgctccgg taacacgacc ggcaagactg cgccgccacc ggccgcgcgc
     2041 aatcggcgcg tgcagccggc gagcgtgagc ccgaccgcaa ttaccgaaga ttttaaggaa
     2101 gcgctcgcag tcatccggca aaactatatt gacggcaaca agctggatta caacgacgtc
     2161 tacaagtcct cgatctttgg catgctgagg tcgcttgacc cgcactcaaa ctatttcgac
     2221 cgccaggaat tcgaggacat gctgagcgat cagcgcagcg agtacttcgg catcggcgcg
     2281 tcaatcctca attacgcgat cggtaattcg gtcgacacgt atatcagcgc gactttccaa
     2341 aactcgccgg cgtcccgtgc ggggctgcgt tatggtgatc ggattgatgc ggtggacggg
     2401 gtctcgatgc acggcaaggg atccgccgaa gtgcgagaca agattcgcgg tccacgcggc
     2461 acgcacgtga cggtgacggt cactcgtgcg gcaaccggaa agcaggaacc cgtcgaaata
     2521 attcggaacg cggtgccaca gccttccgtg cccgatgctt acttcattag accgggtgtg
     2581 ggctatatcg acatgacgcg cggtttcaac tcggacaccg acgacggctt gcaggcagcc
     2641 ctcgagtatc tccacgcgga gggcatgacg tcgctggtgc tggatctgcg aaacaatccg
     2701 ggtggcttgc tggatcaggc aatttacgtt gcgcgtacat ttttgccggc cgggcagatc
     2761 atcatgtcgc agaaaggccg caacggcatg aacgatcgta tctacacttc aaacaaaacg
     2821 aatccggatc gcgtaccgct ggttgttctc atcaacgagt acagcgcgtc agcgtctgag
     2881 atcgtggccg gcgcggttca ggatcatgat cgtggattga tcgtggggca gaccagcttt
     2941 ggcaaaggcc tggtgcagac gattatgcgg ctggactatg gcgcggggat gacgctgaca
     3001 tcagcgtatt actacacacc ttccggacgc ctgattcagc gtgatttctc ggacggcagt
     3061 tggtacaact acatctatcg cggtggcatt gcgcgcgaca acaacaacgc cccggttcag
     3121 ccgactggcc cggccatgcg g
//
LOCUS       DATDBY010000363         3743 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1849027, whole genome shotgun sequence.
ACCESSION   DATDBY010000363 DATDBY010000000
VERSION     DATDBY010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3743
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1849027"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VIT19_06685"
     CDS             complement(<1..255)
                     /locus_tag="VIT19_06685"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5838704.1"
                     /translation="MPFLEALKLALAAILGHKMRSFLTLLGVIFGVATVIVVVSLVEG
                     FNHYVDEKIADIGTNAFAVRKFSIDDFSSVAALNAARRRNK"
     gene            complement(478..1434)
                     /locus_tag="VIT19_06690"
     CDS             complement(478..1434)
                     /locus_tag="VIT19_06690"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HEY5838705.1"
                     /translation="MISLKRFSLLMATVAFTLTSAVSALAQQPPVTVKPIRPSQKASV
                     MQTFGVTDVTITYSRPAVKGRPIFADAPASMEERAKGEATLDNQNERKPGEPIVPYNH
                     IWRAGANEATLFQVTDDVLINGQPLKAGAYSLHTIPGKDEWTIIFNSDPGQWGSFNYD
                     SKKDTLRVKTKPQTASDNQEWLLYTIDPLDASSARVNIRWEKLTVPFTVAVKDVKALW
                     RAKADAVIAANPTNEQLTRQVALTYLGDKNYDEALKFIDQSIKTKETFQNLSSKANIL
                     WAAGKKDEALTVADAAIAKGKADKANTTAFEKRVADMRAGKL"
     gene            complement(1653..2567)
                     /locus_tag="VIT19_06695"
     CDS             complement(1653..2567)
                     /locus_tag="VIT19_06695"
                     /inference="COORDINATES: protein motif:HMM:NF019533.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1684 domain-containing protein"
                     /protein_id="HEY5838706.1"
                     /translation="MKTISTRKLSIAAGAALLFVASCSRAPQPLDRQAYAGEIDQWRA
                     KRLASLTSESGWLSLIGLFWLKEGRNTFGSDAANDIVVPKVPARAGEFVLANGVVTFR
                     TPHAKAFIVDGAPISSAELSTDLDEKPTIVRAGSLSFQIIKREDKLGVRVKDKDNPDR
                     ASFRGLEYFPTDQKWRIEARFEPYNPPRAIPILNVLNTETDEPSPGAVAFEVGGKTYR
                     LDAITERGEKQLFMIFADGTRGKETYGAGRYLYIDPPDANNRIVIDFNKAYSPPCAFT
                     NFATCPLPPQQNILPVAIDAGEKFKDAH"
     gene            complement(2954..>3743)
                     /locus_tag="VIT19_06700"
     CDS             complement(2954..>3743)
                     /locus_tag="VIT19_06700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838707.1"
                     /translation="IIDAVLQNAARTGEAERRAKETQREFFEKERGARQIAEELRARG
                     NHAAAEFFESAELAPLDGELSADDAWLLAQHLEVSDADIDDSWLAREGLEELLVEAAE
                     QISENAQAVLNAERRDTGEVAPERISLIRRLMFMTVKDRVKFALKGDREARGILIRDS
                     NRIVATAVIHNPRISEKEIENIASMRTVSDEVLRLIGMNRAWTRSYPIIHNLARNPRT
                     PMATAITILSRIQMKDLKALSENRNISEGVRRQAYRLVQTRKGK"
BASE COUNT          814 a         1069 c         1006 g          854 t
ORIGIN      
        1 tttgttacga cggcgcgccg cgttcagcgc ggccacactt gagaagtcat caatcgaaaa
       61 ctttcgcacg gcgaaagcgt tcgtcccgat atcggcgatc ttctcatcga catagtgatt
      121 gaagccttca acgagtgaca ccacgacgat caccgtcgcc acgccgaaaa tcacaccgag
      181 caaggtgaga aatgaccgca ttttgtgccc aagaatcgcg gcgagcgcca gtttgagtgc
      241 ttcaagaaaa ggcataaaaa cccgcccaaa gaatacagct ttttacggat tgagggagag
      301 tgaagtttca gggacgctct cattcacacc ttgctttagc aaggtggcac aaccaccgaa
      361 aacgcaaaca aaaaaccgtt tcaacggttt ccgtgctgga agccgttgaa acggctgaag
      421 accaaccctt acgtctgcga cacctcgctg aagcgaggtg tgaataacat ttagaaacta
      481 aagcttaccg gccctcatat cagcgacacg cttttcaaag gctgtagtgt ttgccttgtc
      541 tgctttgcct ttggcgattg cggcgtcggc aaccgtcaac gcttcgtctt ttttcccagc
      601 ggcccaaaga atgtttgcct tagacgaaag gttttgaaat gtctctttgg ttttgatcga
      661 ctggtcgatg aacttcagcg cctcgtcgta attcttgtca cccaggtaag tcaaagccac
      721 ctgtcgcgtc aattgctcat tagttggatt cgccgcgatc accgcatccg ccttcgcgcg
      781 ccacagagcc ttcacgtcct tcaccgccac agtgaaaggc acggtcagct tttcccagcg
      841 gatattaacc ctggcagaac tggcgtcaag cggatcgatt gtgtacagca accattcctg
      901 gttgtcggat gccgtctgcg gtttggtctt aacgcgcaac gtatctttct tgctgtcgta
      961 attgaagctg ccccactgcc cggggtcgct gttgaagatg atcgtccact cgtccttacc
     1021 gggaatcgtg tgcaggctgt atgcgccggc cttcaatggt tggccattga tcagtacgtc
     1081 atcagttacc tgaaacagcg tcgcttcatt cgcgcccgca cgccagatgt ggttgtaggg
     1141 gacgatcggt tcgccgggct tacgctcgtt ttgattgtcg agcgtcgcct cgcctttcgc
     1201 gcgctcttcc atcgacgccg gtgcgtccgc gaagatcggg cgtcccttaa ctgcgggacg
     1261 gctgtaagta atcgtcacat ccgtcacgcc gaaggtctgc atgacgctgg ctttttgact
     1321 gggccgaatc ggcttaaccg tcaccggtgg ctgttgcgcc agggcggaca cggcggatgt
     1381 aagcgtgaag gcaaccgtcg ccatcaagag agagaatcgt ttaagagaaa tcatcgcggg
     1441 cactccttag aaggtgaaat ttgtgcgcgc attatctacc gcggtgcacg actcggcaag
     1501 actggcggcg aattaaccgt gacaattcac aactttttac aatagcgtgc tttcggaaaa
     1561 ctgactggag cgcaatcgtc tcgattgctg actccaggat cagaagcaag cgggacgctt
     1621 gcgctccagt ccaaaaactc aaacgccggt gactagtgtg cgtccttaaa cttctcaccc
     1681 gcgtcaatcg caacaggcag aatattctgc tgtggcggca gcgggcaggt agcaaagtta
     1741 gtgaatgcgc agggcgggct gtaagccttg ttgaaatcga tcacgatgcg attgtttgca
     1801 tccggcggat cgatgtagag ataccggccg gcgccataag tctctttgcc gcgcgtgcca
     1861 tccgcgaaaa tcatgaataa ctgcttctcg cctcgttcgg taatcgcgtc caggcgatag
     1921 gtcttgccgc caacttcgaa ggcaacggcg ccgggcgacg gttcatccgt ctccgtgttc
     1981 agcacgttca ggatcggaat agcacgcggc ggattgtagg gttcaaagcg cgcttcgata
     2041 cgccactttt gatccgtggg aaagtattca aggccgcgga agctggctcg atcggggttg
     2101 tctttgtcct tgacgcgcac gccgagcttg tcttcgcgct tgataatctg aaagctcaat
     2161 gaaccggccc gcacgatcgt cggcttttca tcaaggtcgg tgcttagctc ggctgacgaa
     2221 atcggcgcgc catcaacgat gaacgccttc gcatgtggcg tccgaaatgt aacgacgccg
     2281 ttcgccagca caaactcgcc tgcgcgcgcc gggactttcg gcacgacaat gtcgttggcc
     2341 gcgtcgctgc cgaaagtatt cctgccctct ttcagccaaa acaatccaat caacgagagc
     2401 cagccacttt cgcttgtgag acttgcaagt cgcttcgcgc gccactggtc gatctctccg
     2461 gcgtaagcct ggcggtcaag cggttgcggc gcgcgcgaac atgaagccac aaacaacaag
     2521 gccgcgccgg cggcgatgct cagctttcga gtactgatag tcttcacgat tcgaatcttg
     2581 cctgaattgt cgggtaagcg gcaaacagaa aagcgccccg ccaactcttg cgaactggca
     2641 gggcgcctac ttccgggtag gttcgggtat tacaaggggt gacaaagcaa aagacttgag
     2701 aatcgtcact cacgtccgat cctgtactac gaggtgcatt gacgggcgag ataattccac
     2761 ggcgaggtac gaataaaaag atccgccgct tttcgctttg cctcagcaca cgaccgcgcg
     2821 tcgttgcgtt atcacactgt caaatacctg aagcttgact cggcttaagg cgcaatctat
     2881 acccattcca aacgccagtc aagcaaaatc cagacaaatg tgacaagtct gtgacaggct
     2941 gaggggcgcg tcgtcactta ccctttcggg tctgaaccag acggtatgcc tgccggcgaa
     3001 caccctccga aatgttccga ttctctgaga gcgccttaag atccttcatc tgaatgcgcg
     3061 acagaattgt gatagccgtg gccatcggcg tgcgcggatt gcgggccagg ttatgaatga
     3121 tgggatacga gcgcgtccag gcgcggttca tgccgattag ccgcagcacc tcatcggaaa
     3181 cagttcgcat gctggcaatg ttctcgattt ctttttcgct gatgcgcgga ttgtgaatga
     3241 ccgcggtcgc cacaatcctg tttgagtcgc gaatgagaat gccgcgcgct tcgcgatcac
     3301 ccttcagcgc aaacttcacg cgatccttca ccgtcatgaa catgaggcgt cgaatcagcg
     3361 agattcgttc aggtgcgact tcgccggtgt cacgacgctc cgcatttagc accgcctgcg
     3421 cgttttcact tatctgttca gccgcttcaa cgagcaactc ttcgagccct tcgcgcgcga
     3481 gccaactgtc gtcgatgtcc gcgtccgaaa cctcaaggtg ctgcgccaga agccatgcgt
     3541 catcggctga caactcacca tccaacgggg caagctctgc cgattcgaag aattccgcgg
     3601 cggcgtgatt gccccgcgcc cgcagctctt cggcgatttg ccgagcaccg cgttctttct
     3661 caaagaattc gcgttgcgtc tctttggcgc ggcgttccgc ttccccagtg cgtgccgcgt
     3721 tctgaagaac ggcatcgata att
//
LOCUS       DATDBY010000364         3188 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_441552, whole genome shotgun sequence.
ACCESSION   DATDBY010000364 DATDBY010000000
VERSION     DATDBY010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3188
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441552"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..536)
                     /locus_tag="VIT19_06705"
     CDS             complement(<1..536)
                     /locus_tag="VIT19_06705"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY5838708.1"
                     /translation="MTTFYQIAFTALLSLTLLAPVEALARKKPDKRKVAQPTRAELKQ
                     AQARLSEMGYGAGRNALVAFQKYEGRSATGQFSRTEVEAILNARAPQPRDSGYRHVEI
                     DLDRQVLLLIDDGGAVQKILPVSTGSNKQYREKTMSGLAYTPRGRFRVYSKLKGWRKS
                     PLGLLYYPNYFSDGIAIHG"
     gene            857..2116
                     /locus_tag="VIT19_06710"
     CDS             857..2116
                     /locus_tag="VIT19_06710"
                     /inference="COORDINATES: protein motif:HMM:NF039204.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5715 family protein"
                     /protein_id="HEY5838709.1"
                     /translation="MAVWAGLRFTAPNFLRSITSTDIAPVDSRSTTELWEQAIAKVKE
                     DRGVVAGAAPLEIPPELRHYPERRWFLATQVAEVRKHNLATSQDYLDLATKLKNGDLV
                     GVPAVTDTYVLFGVGQIANDDAFARHENDRNVELYNEHQLREEFARLDTAQATLATEI
                     SSLNKQIAGLNRRDKTRRSELQKQLATQQAQLRSNDEHKKQLHELYGQPASRERLFRD
                     YESLQALAKDFRGRTFHLEQPADRQALKVTLLSSLRPQAFKLMEDIAAAYHRQFDRPL
                     PVSSLVRPEQYQDSLRRVNRSATVIETPPHSTGLAFDIDYRYMSAAEQNFLMTELARL
                     KQAGRIEVLRERTANIHVFVFIDGTRPSDELVTASLEDVGPGSKEADEENDKTSAKAN
                     TKKARPTRAKATRAKATRAKPKARRRR"
     gene            2728..>3188
                     /locus_tag="VIT19_06715"
     CDS             2728..>3188
                     /locus_tag="VIT19_06715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838710.1"
                     /translation="MQTLRFRIVHVFAVIGVVAIIAPLATLSGRGQSPAGKSEQQNPK
                     AESLVKPTALITERPAANANSVNIAPFAEAAAHNSLLRHDLTWEFGRKGQRGWYLYDL
                     LIGETLNISHNASSVNFAATIAGWQNQKGLNASGVLDEESWMALVAQWQANR"
BASE COUNT          730 a          911 c          857 g          690 t
ORIGIN      
        1 ccatgaatcg caattccgtc gctgaaatag ttcggataat aaagcagtcc gagaggagat
       61 tttctccaac ccttcagttt tgaataaacc ctgaagcgac cgcgcggcgt gtacgccagg
      121 ccgctcatgg tcttttcacg atactgcttg ttgcttcccg ttgagaccgg cagaatcttc
      181 tgcaccgctc caccgtcgtc tattaacaac agaacttgcc ggtcgagatc gatttcgacg
      241 tgccggtaac ctgagtccct cggttggggg gcgcgcgcgt tcaagatcgc ctcgacctcc
      301 gtgcggctga attgacccgt ggctgacctg ccttcgtatt tctgaaacgc caccagtgca
      361 ttccgtcccg cgccgtagcc catctctgac aggcgcgctt gcgcttgctt caactccgcc
      421 cgcgttggtt gagcgacctt acgtttatca ggtttcttcc tggcgagcgc ttcaacaggg
      481 gccagcaggg taagcgacaa gagcgccgta aaagctattt gataaaacgt agtcatagat
      541 aatttggata acttaataac taaatcgatc attgtcatac ccatcataga acattgagga
      601 gcaccggaac tcgacaggaa ccctgtggaa tggtttcagt tctcttgcgt ttttggtgca
      661 cgcgattgtt cagaatcgaa acacatgtaa tgttctcgac gaggttaaca cctgtttttg
      721 cccgtcgcct aaaatgcccc aaacttgcct tggaagtttc gtgccgcgga gtcgtcgtag
      781 tcctctcctt taatcgctaa tgcgtagtcg gaaagccagt accatctttg ttgtcctact
      841 tagcgcagcc gccggggtgg ctgtctgggc aggactgcga ttcaccgcgc cgaacttcct
      901 gcggtcgatc acatcaacag acatagcgcc ggtcgacagc cgttccacga ccgaattgtg
      961 ggaacaagcc attgcaaaag ttaaagagga ccgcggtgtg gttgccggcg cagcgcccct
     1021 cgaaatcccg cctgaactga ggcattaccc cgaacgccgt tggtttctcg cgacgcaggt
     1081 ggctgaagtt cgaaagcata acctggcgac gtcgcaggac tatctggatc tcgcgacaaa
     1141 actcaaaaac ggcgacctcg ttggagtgcc cgcagtcacg gacacgtacg tcttgttcgg
     1201 cgtcggacaa atcgccaatg acgatgcatt tgctcgccac gaaaatgatc gcaacgtcga
     1261 gctctataac gaacaccagt tgcgcgaaga gttcgcgcga cttgataccg ctcaagcgac
     1321 tctggcaacc gaaatttcga gcttgaacaa gcaaatagct ggtttgaatc gacgcgataa
     1381 aacgcgtcgc agtgagttgc agaaacaact cgcgacccag caagcgcagc taagatcgaa
     1441 cgacgaacac aagaaacagt tgcacgaact ctacggccag ccggcttcac gtgagcgcct
     1501 gttccgggat tacgagtcgc tacaggcgtt ggcgaaagac tttcgcggcc ggacgtttca
     1561 cctcgagcag ccggcggacc gtcaggcttt gaaagtgact ttgctcagtt cgctgcgacc
     1621 gcaggctttc aagctgatgg aagacatcgc ggccgcgtat caccggcagt tcgatcgtcc
     1681 gctgccggtt agctcgctcg tccgaccgga acagtaccag gactctttgc gcagggttaa
     1741 tcggagcgcg accgtcatcg agactccacc gcactcaacc gggctcgcgt tcgatataga
     1801 ttatcgatac atgagcgcgg cggagcagaa ctttctgatg actgaacttg cgcgattgaa
     1861 gcaagccggc cggattgaag tgctgcgcga gcggaccgcg aacatccacg tgtttgtctt
     1921 catcgacggc acgcgaccca gtgacgagct ggtgacggct tcgctggagg acgtgggtcc
     1981 tggttcaaaa gaagccgacg aagagaacga taaaacctcg gcgaaagcaa acacgaaaaa
     2041 ggccaggcca actcgcgcta aggcaactcg cgctaaggca actcgtgcta agccaaaggc
     2101 gcgacgccgt cgttaacacc aacgacagtc accctctccc gcggctcgct cgtcattacg
     2161 ttggcatcct tcttgccata ttagtttttt gccagcccga ctgaactaaa tacgaacaag
     2221 gggatcgact atgggcttcc tcaatttgaa cgctgaccgc aaagttcacg cgccaattca
     2281 ctgccgcctg tgtggctcga cgatcgagcg cggcattccg cggccactgg aatcgatttg
     2341 tctgatttgt cgcgcggcta ttctcgatcg gatgtttcgc gggcgggata ggagcacgct
     2401 tcgtttccga ccgtgagtac gttgaccgca acctctcaac gggtcggcgc agccgacgac
     2461 agcagaaagc ctcgggcgta aacccgaggg tctcgccaaa aaagaagatt gagcccacgg
     2521 agtgggcgcc agacgatcga taatccgccc gcttcgcagg ctaattgtcg tcggcctcaa
     2581 ttcgaccgtg agcgagttta gcgcctcttt tattgccttc ctgcgggtcc tttgtgttaa
     2641 ttttacgtcg aaccatgagg gaccttcgcg catcttatta cttcgcccga cattacgtcc
     2701 tcacaaaaca ctgacaagga agcagttatg cagaccctca gatttcgtat tgtgcacgtt
     2761 tttgccgtta tcggcgtcgt ggcaatcatc gcccctctcg cgacgttgag cggccgcggc
     2821 caatccccag ccggaaagtc tgaacagcag aaccccaaag ccgaatcgct cgtcaaacca
     2881 acggcgctga ttactgagcg ccccgcggca aacgcgaact ccgtaaacat cgcaccgttt
     2941 gcagaggccg cggcgcataa ttctttgctc cgacacgatc tgacttggga atttggaagg
     3001 aagggccagc gcggctggta cctctacgat ttgttgattg gtgagacact aaacatctct
     3061 cacaacgctt cttcagttaa tttcgcggcc acgattgccg gatggcagaa tcagaagggg
     3121 ttgaacgcga gcggcgtgct ggatgaagaa tcctggatgg ccctggtcgc gcagtggcag
     3181 gcgaaccg
//
LOCUS       DATDBY010000365         2924 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1665253, whole genome shotgun sequence.
ACCESSION   DATDBY010000365 DATDBY010000000
VERSION     DATDBY010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1665253"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1011
                     /locus_tag="VIT19_06720"
     CDS             <1..1011
                     /locus_tag="VIT19_06720"
                     /inference="COORDINATES: protein motif:HMM:NF042645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6600 domain-containing protein"
                     /protein_id="HEY5838711.1"
                     /translation="YPYGMTWVSSEPWGYTPYHYGRWAYAGDRWYWVPEAASATPQYS
                     PALVAFVPVGNNEIGWIPLGPGDAYVPRYYDENWQPHYLSRGNVIAANLVNLAAPNAI
                     TVVPVDYFGRSIDPRNVKHVNAASLANVQPTLEPLLLTPLRNAVIHSAWGRGKIDLPP
                     GIAKKLNDRTVVLAHDPVRPRFKKDLEKSLRVERIAEKTKNQKFKVKDERNAGVPQVD
                     PGRQQQIDALAREAARGNKEARREVRQLEKEQRKDQPVRQVQQQQRAQPKIEQPSSPR
                     AEGARIGNPVKGKAPRPQVQPEAPRPQVKQNQPGRGEAKQQNKAPGPPKGGGGGKGKG
                     KP"
     gene            complement(1072..1437)
                     /locus_tag="VIT19_06725"
     CDS             complement(1072..1437)
                     /locus_tag="VIT19_06725"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEY5838712.1"
                     /translation="MLKVYSRTLGDVAVLSLQGRLISGETRSLRDAVGSQSKISAIVL
                     DLSRVTAIDARGLGVMLELQRQTALDGIRFKLMNVNRFTSRVLEVTHLDSVFEIIPKA
                     EAAISPRIAPAQTRIAACA"
     gene            2131..>2924
                     /locus_tag="VIT19_06730"
     CDS             2131..>2924
                     /locus_tag="VIT19_06730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838713.1"
                     /translation="MKSISQKTTPETAVNVAPDSARARRAAERSARAGHWVESLRSSD
                     VNRLWAELHRIVSNHPLVRASRSAGLLIEEGASSAHTDLTQELFVQLLTKSRFQHYLD
                     TSMTDAEIECEIGQIELTNLLTAELRKRHPESYRLARRISTLIQSSANFRRFDSSGTG
                     EEAHRRLADRVYGLSEWPNGKGGRNTHEMEQRVHMIPVRQRDTRMVGCTGDAQIVISN
                     SDLEDLIISVLEAIDSPADVRSLRSMVMSRLPVMDIYLVPLGGDEG"
BASE COUNT          706 a          839 c          809 g          570 t
ORIGIN      
        1 tatccgtatg gaatgacttg ggtttcgagc gagccatggg gctacacgcc ttaccattac
       61 ggacgttggg cctacgcagg cgatcgttgg tactgggttc ctgaagcagc gagcgcgacc
      121 ccacaatatt cgccggcact cgtcgcattt gttccagtcg gcaacaacga gattggctgg
      181 attccgttag gtccaggcga tgcttacgtg ccgcggtact acgacgagaa ctggcaaccg
      241 cattaccttt cgcgcggcaa cgtcatcgca gctaatttag taaacctggc tgcgccgaac
      301 gcaatcactg tcgtgccggt cgattatttt ggacggtcga tcgatccgcg taacgtgaag
      361 cacgtcaatg cagcgagcct ggcgaacgtg caaccgacgc ttgagccgct tctcttgacg
      421 ccgctccgca acgcggtgat ccactcggcc tggggccgag gcaagattga tctgccgcca
      481 ggcatcgcga agaaactcaa cgacaggacc gtcgtactcg cgcatgatcc ggtgagacct
      541 cgtttcaaaa aggatctgga gaaatctctg cgtgtcgaac gcattgctga aaaaacaaag
      601 aaccagaagt tcaaggttaa ggatgagcgg aacgccggag tacctcaggt ggatccgggc
      661 cgtcagcaac agatagatgc gctggcgcgt gaagcggcgc gtgggaacaa agaagctcgc
      721 cgcgaagtgc gtcagttgga aaaggagcag cgaaaggatc agccagttcg ccaggtccaa
      781 cagcagcaac gcgcacaacc gaagattgag cagcccagct cgccgcgggc cgagggagca
      841 cgcatcggaa atccggtgaa ggggaaagct ccgcggccgc aagtccagcc cgaagcgccc
      901 cgaccgcagg tcaaacagaa ccagccggga cgcggagagg cgaagcagca gaacaaagcg
      961 cccggcccac cgaaaggtgg cggcggcgga aaaggtaagg gcaagcccta accgacttca
     1021 gttgttcatg taattgagac gacgcaaagc gccgcctgtg cacttcagct attaagcaca
     1081 ggcggcgatt cgcgtttgcg caggcgcgat gcgtggcgaa attgcggctt cggctttggg
     1141 aatgatttcg aagacggaat ccaggtgcgt gacttcaagt acacggctcg tgaatctgtt
     1201 gacgttcatc agcttgaagc gaatgccgtc caaagcggtc tgccgttgca gctcgagcat
     1261 gacgcccaga ccgcgcgcat caattgccgt gacgcgcgac agatccaaaa cgattgcact
     1321 tatttttgat tgagagccta cggcgtcgcg cagacttcgc gtttctccac ttatgagacg
     1381 gccctgtagc gacaagaccg ctacatcgcc caaagttctt gaatagactt tcaacataac
     1441 tgaccccttg gttgctaact gccggtaatg cgcctttcag gctgaagtgt ccggctaatc
     1501 tctgtaaccc cgataccccg ggggttgaat atcaatacaa tgggtatcac gacgactgca
     1561 cctctggtgt ttcattattt tcgaaatcac ccactgccta accaaaagac gcgcaataca
     1621 gaggcgctgt taacagctat ctaccgaatg tttggctggc ccaaatcaga gggccgaatc
     1681 tgctcagctg agatctaaag ggcagtcttt tccaaaaaat ttatgcagcc gaggccgttc
     1741 atcgggactc tccctgtcat ttcagggcaa tttcctcagt aaatgcgcga attccctcta
     1801 gtgtaaaaac ttgttgctca accctctgcc gatttgttag gatgcttttg gccataccgc
     1861 acagcgattt ggctgccggt atcctgatcg acaccccgct tcggaagtga cgatcgacca
     1921 gcttcccgcg ctaaccgaca acagagaagt cggacaagca ccttctttcc gggactgaac
     1981 acaaaaactt aatcacgctt gagcctgacg ctgtctgtcc gaagcgtgtc cccgtgccct
     2041 tctcacctca gagcagcaga aggctccagc caaaaccgac gatcattcgt cttgccaccc
     2101 cccgtatccg cagtgatacc aaccagcacc gtgaaatcaa taagtcaaaa gaccacgcca
     2161 gaaacggccg tcaatgttgc gcctgattcc gcccgcgccc gccgcgcagc agaacgcagc
     2221 gccagagccg gccattgggt tgaaagcctc cgcagttcgg atgtaaaccg cctgtgggct
     2281 gaactgcatc gcatcgtcag caatcatccg ctggtgcgcg catcccgcag cgccggcctg
     2341 ctgatcgaag aaggtgcaag cagcgcgcac accgatctga cccaggaact gtttgttcaa
     2401 ctgctgacca aatctcgctt ccaacactat ttggacacca gcatgacgga cgccgagatc
     2461 gaatgcgaga tcggccagat agaactaacg aacttactga cggcagagct gcgcaagcga
     2521 catcccgaaa gttaccggtt ggcccgacgc atttcgactt tgattcagtc gagtgcgaac
     2581 ttccgccgct ttgacagcag tggaacggga gaagaagcgc atcgccggct cgcggatcgc
     2641 gtttacggat tgagcgagtg gcccaacggc aaaggtggcc gcaacacgca cgagatggaa
     2701 caacgcgtcc acatgattcc ggtccgtcag cgtgatacgc gcatggtggg ctgcacgggc
     2761 gacgcgcaaa tcgtgatcag caactcagat cttgaagacc tgatcatttc cgtactggaa
     2821 gcgatcgact cgccggctga cgtcagaagt ttgcgcagca tggtgatgtc tcgactcccg
     2881 gtaatggaca tttatctggt tccattgggc ggcgacgaag gtga
//
LOCUS       DATDBY010000366         5072 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2457852, whole genome shotgun sequence.
ACCESSION   DATDBY010000366 DATDBY010000000
VERSION     DATDBY010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5072
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2457852"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..671)
                     /locus_tag="VIT19_06735"
     CDS             complement(<1..671)
                     /locus_tag="VIT19_06735"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY5838714.1"
                     /translation="MATTLDNQDASAKSYRFSAGGIVLAIAFLIYVAARLWHLSATCL
                     WFDEVFSVHAARHSWAEMFKFVAADIIHPPLFYAVLKIWIGIGGESLVWLRLLSVLLA
                     VASIAPFYLLGRELNLKPKERNLAFTLIAVSGFLIKYTQEVRMYSLLLLLSVTSIWLF
                     VRFVRNSRPRTLAALTACNLLLVYTHYYGWLLVFAQACVVLISYRKSFIRFLLSAAVL
                     IFTYVP"
     gene            809..1306
                     /locus_tag="VIT19_06740"
     CDS             809..1306
                     /locus_tag="VIT19_06740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838715.1"
                     /translation="MSANHSIPEDKPRRTLIIVVAVIAAVVIGGFFYLLMRQTAAPEK
                     PATLADAIRAGSPEFEQYRSKIALDKPEAIQSTNVLGGFQMTLETTARNFTGRTITGL
                     EVRAAVLNSEGGVLRERTVVVIPAKRSELEPNKTMFVTVPISQLKETDDRASLWMEVT
                     GFRLR"
     gene            complement(1381..2292)
                     /locus_tag="VIT19_06745"
     CDS             complement(1381..2292)
                     /locus_tag="VIT19_06745"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5838716.1"
                     /translation="MPVVEIENLTKDYEVGFWRKRKVRALDGLTLKVEPRQIFGFLGA
                     NGAGKTTTLKLLMRLIFPTAGRASILGQDINDISMHQRIGYLPENPYFYDYLTPREFL
                     DYSGQLFGLDSATRKRRAEELLTRVNLDQKSWNRQLRKLSKGMLQRVGLAQALVNDPE
                     IVFMDEPMSGLDPVGRREVRDLIASLRTEGKTVFMCSHILSDIEVLCDNVAILKQGRL
                     AHAGSLDELSAREVNLIEVVATGANEAALRENLDGKAQVLIDASGLRIQVQNEKEIDA
                     VIAAVRKANGKLVSVQPVRQSLEELFL"
     gene            complement(2298..3221)
                     /locus_tag="VIT19_06750"
     CDS             complement(2298..3221)
                     /locus_tag="VIT19_06750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838717.1"
                     /translation="MRNMKREAALIVVLVAGLGVSAALSRWLDTNRTDQAKQFAESQL
                     YLSGPAAKRLTLAFNGLAADWYWMRSLQYVGRKIVNHQDSHDGQFALSNLSSLDLRLL
                     SSLLDVATTLDPQFIPVYEYGAVILPEVNPDQAIALLNKGIAANPSSWRLHQHLGYIY
                     WQRREYGKASEIYAAGAQLPGAPAWMTAMSARLKADAGSRDAAREMYIRLAETSGDQK
                     VKDMVTSHLMRLDWLDDRDVIRHLLRSSEMYSRDNRCPTSWRQIGDELRREGLRLDPA
                     TGTPLDPSGVPYRLIADRCDVDLGEGSKVAR"
     gene            complement(3218..3997)
                     /locus_tag="VIT19_06755"
     CDS             complement(3218..3997)
                     /locus_tag="VIT19_06755"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5838718.1"
                     /translation="MAGRTIAIARNAFREAVRDRVLYNLILFALLLIGSAIFLGELSA
                     GQEAKIIVDLGLSAMLLFGAFIAIFVGVGLVYKEIERRTLYAILSKPIGRGQFLLGKY
                     LGLSLTLLVNVVVMGVGVTFALVFVRRGWNPLAAKIWPAILLIYFELLIITAVALVFS
                     SFSSPALSALLTFFVFIIGHFSADLKVLANASGSAPARWLFRGLYYLLPNLSNYSVIT
                     PTAHGLTPEPSAVLVSGIYAVVYVAVLLSVASLIFGRRNFK"
     gene            complement(4075..4557)
                     /locus_tag="VIT19_06760"
     CDS             complement(4075..4557)
                     /locus_tag="VIT19_06760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEY5838719.1"
                     /translation="MSRRANGFSLIELLIVVAIIGIVASIAIPSLLASRRAANEGSAQ
                     SSLRTIQSCQLTYQSTTGRGDYGTLAQLRGEVLTDAVLGGGSKSGYNFAATPSAAGVR
                     PALFYATAVPIVTAGIGQTGTRRFGITENGVIHGDSGGGLAAYANAAAVTAAPAIGNY
                     "
     gene            complement(4664..>5072)
                     /locus_tag="VIT19_06765"
     CDS             complement(4664..>5072)
                     /locus_tag="VIT19_06765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838720.1"
                     /translation="AIPNLLASRRAANEGSAQSSLRTIHSAEGTYQSTVGSGNYGTLA
                     QMGAQDLIDPVLRTGGKSGYNFGVTPTDLVAGVSPATFFATAVPQVVGGIPATGTRRF
                     GVSTDGVMHGDSGGGLAAYANEAAVVAAPALGN"
BASE COUNT         1162 a         1458 c         1449 g         1003 t
ORIGIN      
        1 ggaacgtacg tgaagataag cactgccgcc gagagcagaa atcggatgaa gcttttgcga
       61 tacgaaatga gcaccacgca agcttgagca aagaccagca gccatccgta gtaatgcgtg
      121 tacacgagca gcaggttgca cgcggttaag gctgcgagag ttcgcgggcg tgagttccgc
      181 acgaatcgaa caaacagcca gatcgaagtg acgctaagca acagcaacag gctgtacatg
      241 cgaacttcct gcgtgtactt gatgagaaat ccgctgaccg cgatcagcgt gaaagcgagg
      301 tttcgttcct tcggtttcag atttagttcg cgaccgagaa ggtaaaacgg cgcgatgctg
      361 gccacggcca aaagtaccga caagagtcta agccagacga gcgactcgcc gccgataccg
      421 atccaaatct tcagcaccgc atagaacagt ggcgggtgaa tgatgtcggc ggccacgaac
      481 ttaaacatct cggcccaact gtggcgcgcc gcatgaactg aaaacacttc gtcaaaccaa
      541 aggcaggtgg ccgaaagatg ccacagtcgc gcggcaacgt agatcaggaa ggcgatggct
      601 aagacaattc ctcccgctga gaaacgatag ctttttgccg aggcgtcttg attgtcgagt
      661 gttgtggcca tagctcaggt cgcgcgacat cttacacggt acatacatct ctcgcgtgca
      721 aatcgtggtg ccacttgcgc gttggcgggg taccggccgt cgtttcgcgt cggtggaact
      781 gtgagataaa atgcgggtct aacgatccat gtcagctaat cacagcattc cggaagacaa
      841 gccccggcgg accctgatca tcgtcgtagc cgtcatcgcg gccgttgtca tcggcgggtt
      901 tttctattta ctcatgcgcc agaccgcggc gcctgagaag cctgcgaccc tggcggacgc
      961 tattcgcgcc ggctcgccag agttcgagca gtaccgttcg aaaattgctc tggataaacc
     1021 ggaagccatt cagtcgacca acgtgctggg tggatttcag atgactttag aaacgaccgc
     1081 gcgaaacttt accggccgta cgatcaccgg attggaagtc cgcgcggcag tgctgaatag
     1141 cgagggaggc gtcctcaggg aacgcacagt cgtagtcatc cccgcgaaac gctcggaact
     1201 ggaaccgaac aagaccatgt ttgttacagt tccgattagt cagctaaaag aaacggatga
     1261 tcgggccagt ctctggatgg aagtaactgg cttcaggctg cggtgactgg agcgcaagcg
     1321 tctcgcttgc acgtcgccca tagatgcagc cacggcaagc gagacgcgtg cgctccagtc
     1381 ctacaggaac aattcttcca gcgattgccg caccggctga accgaaacta gtttcccatt
     1441 cgcctttcgc actgccgcaa tcaccgcgtc gatttctttc tcgttctgaa cctggattct
     1501 taatccgctg gcgtcgatca gcacttgcgc cttgccgtcc aaattttctc ttaaagccgc
     1561 ttcgtttgcg cccgtcgcaa cgacctcgat caggttaact tctcgtgcgc ttagttcatc
     1621 gagcgatccg gcatgtgcca accggccctg cttcagaatc gcgacgttgt cgcacagcac
     1681 ttcgatgtcg gacaaaatgt gcgagcacat gaaaaccgtc ttgccttcgg tgcgcagcga
     1741 cgcaatcagg tcgcgcactt cgcgacggcc gacggggtcg aggccgctca ttggctcatc
     1801 cataaacacg atttccggat cgttgaccag tgcttgagcc agtccgactc gctgcagcat
     1861 tccttttgaa agcttgcgca gttgccggtt ccagctcttt tgatcgagat tcacacgcgt
     1921 taacaattct tccgcgcgtc gtttgcgcgt cgccgaatcc agcccaaaca gttgtccgct
     1981 atagtcgagg aactcgcgcg gtgtcaggta gtcgtagaaa taaggattct caggcagata
     2041 gccaattcgt tggtgcatcg agatgtcgtt gatgtcctgg cccagaatgc ttgcccggcc
     2101 ggcggtggga aagatcagtc gcatcagcaa ctttaacgtc gttgtctttc cggcgccgtt
     2161 cgcgccgaga aagccgaaaa tttgacgcgg ctcgactttc agcgttaagc cgtccagcgc
     2221 gcggactttg cgcttccgcc agaagccaac ctcgtagtcc ttcgtcaaat tttcgatttc
     2281 aacgaccggc atagttttca gcgcgctacc tttgagcctt caccgagatc gacgtcacat
     2341 ctgtccgcaa tcaagcgata cggcactcca gagggatcta gcggcgtgcc agtcgcagga
     2401 tccaaccgga gtccctctcg gcgaagctcg tcaccgatct ggcgccagga tgttggacaa
     2461 cgattgtcgc ggctgtacat ctcggaggaa cgcagcagat gccgaatcac atcgcgatca
     2521 tccagccagt ccagacgcat caagtgggag gtgaccatgt ccttcacctt ctgatcgccg
     2581 gatgtctcgg cgaggcgaat atacatctcg cgcgctgcgt cccgcgagcc ggcgtcggct
     2641 ttcagacgcg cgctcattgc ggtcatccag gcaggcgcgc cgggaagctg ggcgccggca
     2701 gcgtaaatct cggacgcctt cccatactcg cggcgctgcc aatagatgta tccgaggtgc
     2761 tgatgcaacc gccacgaaga aggattagcc gcgatgcctt tgttcagcag cgcgatcgcc
     2821 tggtcgggat tcacctcggg cagaatcacg gcgccatatt cgtagaccgg aatgaattgc
     2881 ggatcgagcg tcgtggcaac gtcgagcaaa ctcgacagca aacgcaaatc aagactggaa
     2941 aggttgctca acgcaaattg accgtcatgc gagtcttgat ggttgacgat tttgcggccg
     3001 acgtattgca gcgaacgcat ccagtaccag tcggctgcca atccgttgaa cgcgagcgtc
     3061 aatcgctttg ctgccggccc gctcagatag agttgtgatt cagcaaattg ttttgcctga
     3121 tcggttcgat tcgtgtcgag ccatcggctc agagctgccg agacgcccag gccggcgacc
     3181 aacacgacga ttaaagctgc ctcacgcttc atgtttctca tttgaagttt cgccggccga
     3241 aaatgaggct ggcaaccgac agcagtactg ccacgtaaac aacggcatag atccccgaga
     3301 cgagcaccgc tgacggttca ggtgtcaggc catgcgcagt cggtgtgatt acgctgtaat
     3361 tggaaagatt cggcagcagg taatagagcc cgcgaaatag ccaacgcgcc ggcgcgctgc
     3421 cgctcgcgtt cgccagaact ttcaggtcag cgctgaagtg cccgatgatg aaaacgaaaa
     3481 acgtgagcag ggctgacaac gccgggctgg aaaacgacga aaacaccaaa gcgacggcgg
     3541 tgataatcaa cagttcaaag taaatcagca gaatggcggg ccaaatcttt gcggccagcg
     3601 gattccaccc gcgacgcaca aagaccagcg cgaacgtcac gcccacgccc atcaccacga
     3661 cgttgacgag cagcgtcaaa ctgaggccga ggtacttgcc gagcagaaac tggccgcggc
     3721 cgatcggctt tgaaagaatc gcgtaaagcg tgcgccgctc gatctctttg tagaccagac
     3781 caacgccgac aaagatcgcg atgaatgctc cgaacagcag catcgcgctc aaacccagat
     3841 cgacgatgat cttcgcttcc tggccggcgg acagctcacc caaaaaaata gcgctgccaa
     3901 tcaacagcag cgcaaagaga attaagttgt agaggacgcg atcgcgaacc gcttcgcgga
     3961 aagcattacg ggcaatcgca attgtccgac ctgccatgaa ggtgaatata cacgcccggg
     4021 agtctttgtg cagtaagttt gtctgcggag ggcgtggaag aatcgcagaa tgcgttagta
     4081 attgcctata gccggcgcag ccgtcacggc cgcggcgttc gcgtaagcag ccaggccacc
     4141 gccgctgtcg ccatggatta cgccattttc agtgatgccg aagcggcgcg ttcccgtctg
     4201 gccgatgccg gcagtaacga tgggcactgc cgtcgcgtag aaaagtgccg gtctcacgcc
     4261 ggctgcgctg ggcgtcgccg cgaagttgta tccgctcttc gaaccaccgc caagtaccgc
     4321 atcggtcaaa acctctccgc gcaactgggc cagggtgcca tagtcgccgc ggcccgtggt
     4381 tgactggtac gtaagctggc agctctgaat cgttctcagc gatgattgag ccgagccctc
     4441 attagccgcg cgacgcgagg ccaacaggct gggtatggca atggatgcca cgattccgat
     4501 gatggcgaca acgattagaa gttcgattag tgaaaatccg ttagctctgc ggctcatgat
     4561 attacccctc tcgcgtccgg gtgggcgtga ggcgaattct taaaaaagag cggggtggaa
     4621 gattctccca ccccgcgtac aaaggtttga cgtaagtcaa aggttagttg ccgagggcag
     4681 gtgcagcgac gacagcagct tcgttggcat acgctgccaa accgccgccc gaatcaccgt
     4741 gcataacgcc gtcggtcgaa acgccgaagc ggcgggtacc ggtcgccgga ataccaccga
     4801 caacctgcgg aaccgcagtc gcgaaaaacg tggccgggct cacacccgca accaggtcgg
     4861 tcggggtgac gccgaagtta taaccactct tgccaccggt tctcagcact gggtcgatga
     4921 gatcctgggc acccatctga gccagcgttc cgtagttgcc ggaaccgact gttgactggt
     4981 aggtaccttc cgcgctgtga atggttcgca gcgaagactg ggctgagcct tcgttcgcgg
     5041 cgcgccggga agcgagaagg ttcgggatcg cg
//
LOCUS       DATDBY010000367         2019 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2456257, whole genome shotgun sequence.
ACCESSION   DATDBY010000367 DATDBY010000000
VERSION     DATDBY010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2456257"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2019
                     /locus_tag="VIT19_06770"
     CDS             <1..>2019
                     /locus_tag="VIT19_06770"
                     /inference="COORDINATES: protein motif:HMM:NF012433.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
                     /protein_id="HEY5838721.1"
                     /translation="SLRDFALFAGIPFADLRDPWAMPYRTDFFAYRASDVLQTSSAGP
                     DKRFDTGDDFTVMRIERPYFRFTGEAINRAVARYHRRTGKFIRDAATLKNELRQEAIE
                     FDSLRDPWGEPYRLEFGASQTMFQVIVTSSGKDMRFATESNDDVPLWTSSINYSIDLQ
                     AKINTALETYFNKSPQFPQNDLDFRAALQQSGIAGDDLLDPWGHPYYVTFKQVSVYGD
                     NVRVYSYANYGQKPQQKLEVTPVTRYLNNIYLRSAGEDANEGTADDFNVASFSRLAAE
                     QAGSESAPQPQQPGVILPGSTGAITGTVTDPQGAVIVGTKVTAKNLRNSIERTAETNE
                     NGLYLIKNLSAGTYEVIFDAPAFNRAVVTNVVVRSSNVTQLNVTLDVGAVSETVNVTA
                     GASGLLDMTTSQSLRASSFVLDGVNVITKPGTGGQQLSTPRLREYFPETLVWQPSLET
                     DKQGRAQLQFKLADNITTWKMSVIGSTEDGRVGVVEREIKSFQPFFVDHDPPRVLTEG
                     DEIFLPVVVRNYLDRAQAVNLEIKPEGWFTLLGAATRKVDVAAGDAMRSTFDFRASAS
                     VVDGKQRITAMASDANDAIEKPVTVHPDGEEKSVTTSDIVSNQATLTLDIPATAIPNS
                     AKAELKIYPHLLAHVTESVEAIMARPYGCGEQTISSTYPSLLWLKNYK"
BASE COUNT          471 a          554 c          573 g          421 t
ORIGIN      
        1 aatctctacg ggactttgcg ttgttcgccg gcattccgtt cgcggacctg cgcgacccgt
       61 gggcgatgcc gtatcgcaca gacttcttcg cctatcgcgc ttcggatgtg ctgcaaacca
      121 gcagcgccgg acccgacaag cggttcgaca cgggtgacga tttcacggtc atgcggattg
      181 agcgccctta ctttcgtttc accggcgaag cgatcaatcg cgccgtagct cgttatcaca
      241 ggcgcactgg caagttcatt cgcgacgcgg ccacgctgaa aaatgaactg cggcaggaag
      301 cgatcgaatt tgattcgttg cgcgatccct ggggcgaacc ttatcgactg gaatttggcg
      361 ccagtcaaac catgtttcag gtgatcgtga ccagcagcgg gaaggacatg cgattcgcga
      421 cggaaagcaa cgatgacgtg ccgctgtgga cttcgtcgat caattattcg attgacttgc
      481 aggcaaagat caacaccgcg ctcgaaacct acttcaacaa gtcgccccag ttcccccaga
      541 acgatttgga tttcagagcg gcgcttcagc agtctgggat tgccggcgat gatttgctcg
      601 atccatgggg gcatccttat tacgtgacgt ttaaacaggt gtctgtgtat ggcgacaacg
      661 tgagggttta cagctacgcg aattatggcc agaagccgca acagaagctg gaggtgacgc
      721 cggttacccg gtatctcaac aacatatatc ttcgaagcgc tggtgaagat gctaacgaag
      781 ggacggcgga cgacttcaat gtcgcaagct tttcgcggct ggccgccgaa caagcaggca
      841 gcgagagtgc gcctcagccg caacagccgg gggtgatctt gccaggatcg actggagcca
      901 ttacgggaac cgtgacggat ccgcagggtg cggtcatagt tgggacaaaa gtcaccgcca
      961 agaatcttcg caattccatc gaacgcaccg ccgagacgaa tgaaaatggt ttgtacctca
     1021 tcaagaacct gtccgcagga acttatgaag tcatattcga cgcaccggct ttcaaccgcg
     1081 ccgttgtcac taacgtcgtt gtcaggtcgt cgaacgttac gcaactgaat gtgacgttgg
     1141 acgtgggggc tgtttcggag actgttaacg tcactgctgg cgcttcaggc ttgctcgaca
     1201 tgacgacgag ccagtcgtta agggctagca gctttgtttt ggatggtgtg aacgtcatca
     1261 cgaaaccagg aaccggcggc caacaacttt ccacgccgcg tctacgagaa tactttccgg
     1321 aaacgcttgt ctggcagccg tcgcttgaga ccgacaagca gggccgggcg cagttgcaat
     1381 tcaaactcgc cgacaacatc accacctgga agatgtctgt gatcggctcg accgaagacg
     1441 gacgggtcgg ggtcgtcgag agagaaatca aatcctttca accattcttt gtcgatcacg
     1501 atccgccacg cgtgctcacc gaaggtgacg agatatttct accggtcgtg gtgcgtaact
     1561 atttagatcg cgcgcaagcg gtcaatctcg aaataaagcc ggagggttgg ttcactttgc
     1621 tgggagccgc gactagaaag gttgacgttg ccgcgggcga tgcaatgcgc agcacctttg
     1681 atttccgcgc cagcgcttcg gtcgtggacg gcaagcagcg catcacggcg atggcttccg
     1741 acgctaatga tgcgatcgag aaaccggtga ctgtccaccc tgatggcgaa gaaaaatcgg
     1801 tcaccacgag cgacatcgtt tcaaatcagg caacgctcac cctggacatt ccggcaacgg
     1861 cgattcccaa ctcggcaaaa gcagagctga agatttaccc ccatctgctg gcgcacgtaa
     1921 ccgaaagcgt cgaagcaatc atggcgcggc cgtacggctg tggcgagcag accatctcat
     1981 ccacctaccc gagtttgctt tggctgaaga attacaagc
//
LOCUS       DATDBY010000368         3000 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1843855, whole genome shotgun sequence.
ACCESSION   DATDBY010000368 DATDBY010000000
VERSION     DATDBY010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1843855"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..307
                     /locus_tag="VIT19_06775"
     CDS             <1..307
                     /locus_tag="VIT19_06775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838722.1"
                     /translation="ADFSRQFVIRKIEGKNFGMYASIATPGYKPETALAEISTVDFDN
                     MLNQASRFSVKSLRAITMLAIAERCLKAGSPSSPPQDRDKTYLELASRHSRVINAHR"
     gene            331..774
                     /locus_tag="VIT19_06780"
     CDS             331..774
                     /locus_tag="VIT19_06780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838723.1"
                     /translation="MVRSIIAVIVSYISMFVLNFLGFVGLYAIVGPNHAFKPRLYLAS
                     NRWILMGVAVMFVSGIIAGLLCAAIARGRKATLALAGLILVVGLLLAIPAVMKSRANA
                     GMVRAGDVTSMEAMEKASWPIWAPLVFPFVSAVGAVIGGKLKKRN"
     gene            871..1311
                     /locus_tag="VIT19_06785"
     CDS             871..1311
                     /locus_tag="VIT19_06785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838724.1"
                     /translation="MARSIIAVIVSYVLMFVLVSLSFFAMYSVLGADQSFKPRSWDAS
                     NQWLAVALIVSFVIAVIAGFVCALIARGGKAPLVLALVVFALGFVFAVPSFVANRTDQ
                     GVRDYAPPLVEAMQKAKQPNWVPLALPVIGAVGVLIGAKLKKRN"
     gene            complement(1430..1516)
                     /locus_tag="VIT19_06790"
     tRNA            complement(1430..1516)
                     /locus_tag="VIT19_06790"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1480..1482),aa:Leu,seq:cag)
     gene            complement(1577..1984)
                     /locus_tag="VIT19_06795"
     CDS             complement(1577..1984)
                     /locus_tag="VIT19_06795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838725.1"
                     /translation="MKITKGSKPAKAILFGLILLVAMPALTFAQGRGRGRGQDKKAVK
                     FVNGHDARDGRWDGRGPNRNVSRNRRWRDRDNDDNRFGRQRRVDRDGDGDFDRNDVLL
                     GRRNRVDRDGDGDFDSRDVRLGRRARRSTRSNR"
     gene            2236..2958
                     /locus_tag="VIT19_06800"
     CDS             2236..2958
                     /locus_tag="VIT19_06800"
                     /inference="COORDINATES: protein motif:HMM:TIGR00044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEY5838726.1"
                     /translation="MSLEDSTADDLRLRLLGVWSRIEAAAKRSGRTRDAIKLIAVSKT
                     HPADVLRAAIEAGMTDLGENRVQEAEPKICELGREAATWHLIGHLQSNKARRAVQLFD
                     MIHSIDSVGLVEKLDRACGELQREELPVLIQVDLGHETTKSGADETELPGLIGAVTSS
                     ERLRLTGFMTLPPFFEEAEVTRPFFAKLRELRDEYQDRGVFGAPRGELSMGMTHDFEV
                     AIEEGATMVRIGTAIFGARATA"
BASE COUNT          622 a          800 c          884 g          694 t
ORIGIN      
        1 cgctgacttc agccggcagt ttgtaatcag aaaaatcgaa ggtaagaatt tcgggatgta
       61 tgcatcaatt gcgacacccg gttataaacc cgaaactgcg ttggcggaaa tctccacagt
      121 tgattttgac aacatgctca accaggcgag caggttcagc gttaaatccc tgcgcgcgat
      181 caccatgctc gcaatagccg agcgttgctt gaaagcgggt tccccatcca gtccccccca
      241 agaccgcgac aaaacctacc tggagcttgc gagcagacac tcccgtgtga taaacgcgca
      301 ccgctaagct tctttgaagg aggatctcaa atggtccgtt caatcattgc cgtaatcgtc
      361 agctacatca gcatgtttgt gctgaacttt ttgggcttcg taggtctgta cgccatcgtt
      421 ggccccaacc acgcattcaa gccgcgcttg tatctcgcct cgaaccgctg gatccttatg
      481 ggagttgcgg tcatgttcgt gtcaggcatc atcgccgggc tcctctgcgc ggcgattgcg
      541 cgtggacgca aagcgaccct ggctttggcg ggcctaatcc tggtcgtcgg gttgttgctg
      601 gcgattccgg cggtaatgaa gagccgggca aacgccggga tggttcgcgc aggcgatgtt
      661 acctcgatgg aggccatgga aaaggcctcc tggccgattt gggctccgct cgtatttccg
      721 tttgtcagcg cggtaggcgc agttattggt ggcaagttga agaagcggaa ttagcgtcag
      781 agcccgcgcg tgagcaaggg ctggtttgcg cgcgtggccc ttcctaacgg tcgggctttt
      841 gaaacgacgc tcatagaaag tagaagacgc atggccaggt caatcatcgc agtgatcgtt
      901 agttacgtgt tgatgtttgt tctcgtgtct ctgtcgtttt ttgcgatgta ttcggtactc
      961 ggtgcggacc agtcgtttaa gccgcgcagt tgggacgcgt cgaatcaatg gcttgcagtc
     1021 gcgctgattg tgagttttgt aatagccgtt atcgctggtt tcgtttgcgc tcttatcgcg
     1081 cggggtggca aggcgccatt ggtcttggct ctcgtggttt tcgcgttggg cttcgtgttt
     1141 gcggtcccgt ctttcgtcgc taaccggact gaccagggag ttcgcgacta cgcgccgccg
     1201 ctcgttgaag cgatgcaaaa agcaaaacag ccaaactggg ttccactggc gcttccggtg
     1261 ataggcgcgg ttggcgtgtt aattggggcc aagttgaaga agcggaatta agcgggtacg
     1321 cacgccgctg gcgtgcttat tccgggcagt ggaagcacgc gagacgcgtg cgtaccacta
     1381 agaaaacaaa ggcgagtccc gatttatcgc gactcgcctt ttgattttat ggtgcggatg
     1441 agaggacttg aacctccacg atgtcaccat cacaggcttc tgagacctgc gcgtctgcca
     1501 gttccgccac atccgcgaac gaagggtgat cttacgaacg cgtctcggga agtgtcaagc
     1561 agacgtcact tcgcgtctag cgatttgagc gtgtgctccg tcgcgcgcga cggccaagcc
     1621 gcacgtctct actatcgaag tcaccatcgc cgtcacggtc gacgcgattc cgtcttccca
     1681 gcaatacgtc attgcgatca aagtccccat cgccgtcacg atcgaccctt cgctgacgcc
     1741 cgaagcggtt gtcatcattg tcgcggtcgc gccaccggcg attgcgagag acgttgcggt
     1801 tcgggccacg tccgtcccag cggccatcgc gggcatcgtg accattcacg aacttcacgg
     1861 ccttcttgtc ctgcccgcgg ccacgtccac gcccttgcgc gaaagtaagc gccggcatcg
     1921 ctaccagcaa aattaatcca aacaaaatcg cttttgcggg tttgcttccc ttagttattt
     1981 tcattatcag ttcctccgaa atttgaattc taaaatttat tgcaagttga ttgtcgtgcg
     2041 gggtacacgg ttattgaagt caatcaccgt gccgcgagag attgcgaccc gtttgcacga
     2101 gttgcggcga tttcgttgat tcaagccgca cgataccgtg acgcgcgggg ctgatatcgg
     2161 acgtcgatat gaaccaacgc cgtgtttgcc ggtcgctgaa agcggttgtt atagtgcgcg
     2221 tgaggcataa atgaaatgag tttggaggat tcgactgcgg atgatttgcg cctgcgcctg
     2281 cttggcgtgt ggtcgcgcat tgaggctgcg gcgaaacgga gcggcagaac gcgcgacgcg
     2341 atcaaattga tcgctgtgag caagacgcat cccgctgatg tcctgcgcgc ggcgatcgaa
     2401 gcaggcatga cggatctcgg cgagaatcgc gtgcaggaag cagaaccaaa aatctgcgag
     2461 ctgggacgtg aagccgcaac atggcactta atcggtcatc ttcagtcgaa caaagcgcgt
     2521 cgggccgttc agcttttcga catgattcat tcgatcgatt ccgtggggct cgtggaaaag
     2581 ctcgatcggg cgtgcggcga gctacaacgt gaagaattgc cggtcctgat tcaagtcgat
     2641 ctcggacacg aaacgacgaa atccggggca gacgaaacag aactgccggg acttatcggc
     2701 gcggtgacca gcagcgaacg tctcaggcta accggattca tgactttgcc gcccttcttc
     2761 gaagaagcgg aagtgacgcg gccgttcttt gcaaagcttc gcgagttgcg cgatgaatat
     2821 caggaccggg gcgtgtttgg cgccccacgg ggtgagctgt caatgggcat gacgcacgat
     2881 ttcgaagtgg cgattgaaga aggcgcgacg atggtgcgca tcggcacggc aatctttggc
     2941 gctcgcgcaa cggcataaca atgctaatcc tgaagacact ttatctgttc atcacgtggg
//
LOCUS       DATDBY010000369         4021 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1071201, whole genome shotgun sequence.
ACCESSION   DATDBY010000369 DATDBY010000000
VERSION     DATDBY010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4021
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071201"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1065
                     /locus_tag="VIT19_06805"
     CDS             <1..1065
                     /locus_tag="VIT19_06805"
                     /inference="COORDINATES: protein motif:HMM:NF015413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY5838727.1"
                     /translation="DFGEHGVKLDSDILDLRPFMRRDGEVMLARDVLDKQLIDVDGKR
                     VVRVNDVQIIPAANEWRVTGADVSLAGLWRRLAPAFMRRGNPVEVIDWADVGYLATDA
                     ATVQLKSSRGKLTRLHPVEIARLAAAFSYQQGAEIVESLDDETAAETLEEMAAERQAQ
                     IIGDMDEERAADILEHMSPDEAADVLGDLPEDKAEDLLHRMDDEEQSEVAELLSYEDD
                     TAGGLMTTEFVTLPRDLTVGEALARLREMAETPNMIYYLYVVEREESWKLVGVIALRS
                     LILARTSAPLEQVMRSDLQVAHPDDSADEVAHKIAEYNLLALPVLDETGDILGIVTVD
                     DAIEHLLPRDWRERVPRLLG"
     gene            1212..2528
                     /locus_tag="VIT19_06810"
     CDS             1212..2528
                     /locus_tag="VIT19_06810"
                     /inference="COORDINATES: protein motif:HMM:NF013715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HEY5838728.1"
                     /translation="MPRLPTNVRGAGRGILRRGAQGVRRTVARRPRLFLYLSVLGPGL
                     ITANAGNDAGGIATFASVGADHGYKLLWLLIPLTISLGMVQEMCARMGAVTGKGLADL
                     IRERFGVRWTALVMLALLIANGGVTVSEFVGIAAAMELFGVARYISVPIAAIVIWWLV
                     VRGNYQRVERVFLAMTLVFLGYVVSAFLARPSWGTVAREMVRPSIEVTPVYLFTLVAI
                     IGTTISPYMQVFIQSSVVEKRVRPENYALTKADVWGGTVFAMLIVFFIVVSTAATLHL
                     RGEHVDSAAQAARALRPFAGAYAELLFGVGLFGASMLAAGVVPLATAYSITEAFGFEK
                     GLSNSFREAPIFVGVFTFLVALGALIAMMPGLPIISVLLLTQVINGVLLPVVLFAILR
                     LVNDRELMGSHVNGGLYNVAAWATVLIVSASSLLLIGITIFRRLAA"
     gene            2625..>4021
                     /locus_tag="VIT19_06815"
     CDS             2625..>4021
                     /locus_tag="VIT19_06815"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEY5838729.1"
                     /translation="MATSRKKSDILLYLVVTAVFGLATFLFWKFSGNHIEGQPSFAGW
                     WRIPWLVFLSGLGYASIRVINALLFDFAFRLRQGYEAPTLVRNIFTLVAFVILFVVIF
                     SKLYQEVNLGALFTTSAIFGVIIGLALQDTLGNFFAGISLHADRPFQVGDVVVLGQQQ
                     LTGVVEGITWRAIKIRTFQNHIVLVSNSSAAKESIEVCPRENLNARLVFFNTLYTDSP
                     AKTIHIVREAIREAENVSVKITPIVRIRNLGDNGIDYEVKYWLEDYAKYNDNDALIRQ
                     LIWYALRRANITFAFPTRTLHVERRGPTPLATGPQKEVIERLSAVDIFAPLSNEETEK
                     LAGGAMRHVFAPGELVIRAGDQGASMFVVHSGRVQVQISEGGKPKPVAVLSEGAFFGE
                     MALFTGEPRTANVVALEETEVLEIGHDAMKHLFETNPDLAESISWTIAERRAGLEASS
                     QQAVAVAQAASAGLL"
BASE COUNT          789 a         1109 c         1197 g          926 t
ORIGIN      
        1 gacttcggtg agcatggcgt aaagctcgat tcagacattc tggatctccg cccgttcatg
       61 cgacgcgacg gcgaagtgat gcttgcgcgc gatgtgttag acaaacaatt gatcgacgtt
      121 gacggcaagc gagtcgtgcg cgtaaacgac gtgcaaatca ttccggctgc gaacgagtgg
      181 cgcgtaacgg gcgccgacgt aagcctcgcc ggtctctggc ggcggctcgc tcccgcgttc
      241 atgcgtcgtg gaaatccggt tgaagtcatc gactgggcgg acgttggcta tcttgccact
      301 gacgccgcaa cggtgcagtt gaaatcttcg cgcggcaagt taacccgcct gcatccggtg
      361 gaaattgcgc gcctcgcggc cgcgttttcg tatcaacaag gcgcggaaat cgttgaatcg
      421 ctcgatgatg aaacggcagc tgagacgctc gaagaaatgg ccgccgagcg ccaggcgcag
      481 ataatcggcg acatggatga agagcgcgcg gcggacatcc ttgaacacat gtcgcccgat
      541 gaagcggcgg atgtcctggg cgacttgccg gaagacaagg cggaagatct tctgcaccgc
      601 atggacgacg aagaacagtc tgaggtcgcc gagctgttgt cttacgaaga cgacacggcc
      661 ggcgggttga tgacgactga gttcgttact ttgccgcgcg atttgacggt gggcgaagcg
      721 ctcgcgcggc tgcgcgaaat ggctgagacg cccaacatga tctattacct ctacgttgtc
      781 gagcgcgaag agtcatggaa attggtcggc gtgatcgcgc tgcgaagttt gatactcgcg
      841 agaacctcgg cgccgctcga gcaagtgatg agatcagatt tgcaagtggc gcatccggat
      901 gacagcgctg acgaggtcgc gcacaaaatt gccgagtaca acctgctggc gttgccggtg
      961 ctggacgaaa ccggcgacat cctcggcatt gtcaccgtcg atgacgcgat cgagcatctt
     1021 ttgccgcgcg actggcgcga acgcgtgccg cgattgttgg gttagctgac tctgtttaga
     1081 ggtgggcgtt gcccgccgct tggctttcgt ttagacgctg gacttgtccc gcgagtcgcc
     1141 gcacaagtgc ggcgtctaaa catttggaaa gtcggttcac caaatcaata tgagatccga
     1201 ggaccctccg agtgccaaga ctaccaacca acgtgcgagg tgcaggtcgg ggaatcctgc
     1261 gacgtggtgc tcaaggtgtg cgccgcacgg tggcacgccg gccacggttg tttctgtatc
     1321 tttcggtact tggcccaggg ctcatcaccg caaacgccgg caatgacgct ggcggcattg
     1381 cgacctttgc gtcagtcggc gcagatcacg gttacaagct tctctggctt ctcattccgc
     1441 tgaccataag cctcggaatg gtccaggaga tgtgcgcgcg catgggcgcc gtgacgggaa
     1501 aaggtctcgc cgatttgatc cgcgagcgct ttggcgtgcg ctggacggcg ttggtgatgc
     1561 tcgcgctcct gatcgcaaac ggcggcgtta ccgtttcgga gtttgtcggc atcgcggcgg
     1621 cgatggaact gtttggcgtg gcgcgttaca tctctgtgcc gattgccgca atagtgattt
     1681 ggtggctggt cgtgcgggga aattatcagc gcgttgagcg agtgtttctc gcgatgactt
     1741 tggtcttcct cggttatgtc gtgtcggcct ttctcgcgcg tccgtcctgg ggaactgtcg
     1801 cgcgcgaaat ggtgcgtccg tcaatcgaag ttacaccggt ttatttgttc acgctggtcg
     1861 cgatcatcgg caccacgata tcgccctaca tgcaggtttt cattcaatcc tcagtcgtcg
     1921 agaaacgcgt gcggccagaa aactatgcgc ttacaaaagc tgacgtttgg ggcggaacag
     1981 ttttcgcgat gttgatagtt tttttcatcg tggtttcgac tgcggcgacg ctgcacttgc
     2041 gcggcgaaca cgttgattcc gccgcccagg cggcgcgcgc tctacgccct ttcgcgggcg
     2101 cctatgccga gctgttgttc ggggtgggat tgtttggggc gtcaatgctg gccgccggag
     2161 ttgttccttt ggccacggcc tactcgatta cagaagcgtt cggatttgag aagggcctct
     2221 cgaacagttt ccgggaagcg ccgatttttg tgggcgtatt cacattcctg gtagcgctcg
     2281 gcgcgctcat cgcgatgatg ccgggcttgc cgattatttc cgtgctcttg ctgacccagg
     2341 ttatcaacgg cgtgctgctg ccggtggttc tttttgcgat tctccgcctg gtcaacgacc
     2401 gcgaactgat gggcagtcac gttaacgggg gtttgtacaa tgtcgccgcg tgggccacgg
     2461 tcctgatcgt ttccgcttcg tcgctacttc tgattggcat cacaatcttc cgccgattgg
     2521 ccgcataaca tccggacaaa ggacatatcc tctcgccaac gcattaattt gatggtaaaa
     2581 gtacactcgc ttcatcgcag attcgctacg actagcacac cttaatggct acttcgcgaa
     2641 agaagagcga catccttctt tacctggttg tgaccgcagt ttttggtctc gccacgttct
     2701 tattctggaa gttttccggg aaccacatag agggccagcc ttcctttgcg ggttggtgga
     2761 ggattccctg gctggtgttt ctttccggcc tcggctacgc gagcattcgc gtcattaacg
     2821 cgctgctatt cgacttcgcg ttccgcctaa ggcagggtta tgaggcgccg accctcgtcc
     2881 gtaatatctt caccctggtc gcgttcgtca tcctcttcgt tgtcattttc agcaagttgt
     2941 accaggaagt taacctggga gcgctcttca ccacatccgc gatcttcggc gtcatcattg
     3001 gtctcgcttt acaggacacg ctcgggaact ttttcgcggg gatctctctt catgctgatc
     3061 gtccttttca agtcggggat gtagttgtgc tgggccagca acagctgacc ggcgtggttg
     3121 aaggcatcac ctggcgcgcc ataaagattc gaacgtttca gaatcatatt gtcctggtga
     3181 gcaacagcag cgcggctaaa gagtcgatcg aagtttgccc gcgtgaaaat ctgaacgcgc
     3241 gactagtgtt cttcaatacg ctgtacacgg attcgcccgc caagacaatt catattgtgc
     3301 gcgaagcgat ccgtgaagcc gaaaatgtct cggtaaaaat cactccgatt gtgagaattc
     3361 gaaacctcgg agacaacggc atcgactatg aagtcaaata ctggctggaa gattacgcga
     3421 agtacaatga caacgacgcg cttatccggc aattgatctg gtacgcactg cgtcgcgcga
     3481 acataacctt tgctttcccc acccgcacgc tgcacgtcga acgaaggggt ccgactccgc
     3541 tggccaccgg gccgcagaaa gaagtcattg agcgactctc agccgtcgat atcttcgcac
     3601 cgctctcaaa tgaagagact gagaaactcg caggcggggc catgcgccac gtttttgcgc
     3661 cgggcgagct cgtcatccgg gccggagacc agggcgcgtc aatgttcgtg gttcatagcg
     3721 gccgcgtgca ggtgcagata tctgaaggcg gtaagccgaa gcctgtggcc gtcctcagcg
     3781 aaggtgcatt cttcggcgaa atggcgctat ttaccggcga gccgagaacc gccaacgtcg
     3841 tcgcgcttga agaaaccgaa gtactcgaaa tcggtcacga cgcgatgaag catctcttcg
     3901 aaaccaaccc cgatttggct gagtccatta gctggacgat cgctgaacga agggccggct
     3961 tggaggccag ctctcagcag gccgtcgccg tggctcaagc cgcatctgcc ggcctactca
     4021 a
//
LOCUS       DATDBY010000370         9717 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1301960, whole genome shotgun sequence.
ACCESSION   DATDBY010000370 DATDBY010000000
VERSION     DATDBY010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 9717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9717
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1301960"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="VIT19_06820"
     CDS             complement(<1..462)
                     /locus_tag="VIT19_06820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838730.1"
                     /translation="MFATEVIPSKCLEYGTNCPPPLNGYICIDAPDFCDSLEKTGYWS
                     GYSDSVQQASAWNISPLYQLDMFDWTVLIVYFGILTVLAIYGVYRVKQVIDFWRYSKY
                     PPKPKGEFAAADLPHITVQLPLFNEMYVVERLVKAVTEIDYPRERMEIQVLD"
     gene            689..3382
                     /locus_tag="VIT19_06825"
     CDS             689..3382
                     /locus_tag="VIT19_06825"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HEY5838731.1"
                     /translation="MNEKPAERYLGKSTRRLALAVITFFSAATLLAPGFWTAKVAGLC
                     PGPNFNSAPTLPIAGTLRAVTTGDLNRDGKVDLVVASGNVPDAHISVRLGSGNGAFAD
                     PVTLNDSVGIGVAKMALADFNRDGNLDLVAATNALMLRYGNGQGGFSPAVTFNGAGPV
                     MVVADFNADGLLDVATTSEGLVGSILPRVSVFIGQGAGGFSGPTVIELAPSYAPDELG
                     VADVNGDNKLDLLVAQRNGGGIARLFGDGTGNFSLSYLTSTGFNITMTFKIADFNNDN
                     KADIISDSGAGNGVNLMLGNGNGEFPTKIELPNLSAQDLVVGDFNLDGKSDFAVARRS
                     GVAIMLGNGDGTFARRDYAAGAEPSALTLDDFNNDAKPDLLVLNSQSNDFSILIGDGL
                     GKFSAARTYSPQDPASPTGIVTADFNGDGQQDFAVASLTSRRILVFMANGQGEFAPAV
                     VYNVNPILPRSLAVADFNTDGKLDLAFLHGSDSSGNPIGILRGNGDGTFLPVISFVAF
                     VSLPTWLTAGDLNNDGRPDLCILAGDRLYTLINNGINFTTGSSFSVTQNIQVGVGNFS
                     THIRVADLNGDGKADMLVPVTELLHQRLWIGFGDGNGGITSSTTISFASIQSVDVGDF
                     NQDGKPDLAVTGGVAIGQDGVLIFMGDGNGSFTFREGIAAGSGWVEKGDFNGDGKLDL
                     VTGGLSAVSVLTGLGTGSFSVATNYGVGVDPKYLATGDFNGDGKSDIAAANVATRDVT
                     VMLTVPCIAAPPSPTPSPSPSPSPTPSPSPTPGATPVLLTEENSNRAIVMDAVTMVSE
                     VFPLQTSFNFSSDHRTRIMLFAYNVTLMPGEGYSVVSAQAENAQHAIFQLPIEFVGPI
                     NGHPLTQIVVRLPDGLTGDVLVRISFRGVPSNQALVRIGSS"
     gene            3617..5308
                     /locus_tag="VIT19_06830"
     CDS             3617..5308
                     /locus_tag="VIT19_06830"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEY5838732.1"
                     /translation="MSRTRLNQFYIWLVVLAGTAALFFSLREFPVSKLDVRFLVMALA
                     TVIIGPRLSIQIPRVRAHISVSDTFIFLTLLLFGGEAAIILATVEAICSSVRISKQTS
                     THFFNAGATAVSTFLTVWSLRLLFGETVTWQDSYSTNHLAAISAMAIIQYASNSLLVA
                     TSAALKSETSIWATWRKSFLWTSITYFAGASAAALIARFIGTVGFFAFVSTVPIIAIV
                     YFTYLTYLKNVSSAAAQAEQARQHVEELNRHIGEQERISKALRETEEHFRNAFDYAAI
                     GMALVSPQGSWLRVNRSLCDLIGFTEAELLASNFQTVTHGDDLQHDLANLYRLMQGET
                     LTCQVEKRYVHQSGQIVWALNNVSLVRDVDGDPVHFIFQIQDITERKRVEAALQNLSL
                     IDELTGLYNRRGFMAVTEQHLAAIRRNKQVPVILYADLDGLKTINDSLGHHEGDRALK
                     KTGDILKDTFRTSDIVARLGGDEFVVLAAIGQEEVADSLTERLQERFDICNAQANRPY
                     QLSISVGVVHFDSADTSIEEVTARADRSMYEDKRRKHSLRMPPLEMVRPLIEAAA"
     gene            5551..6783
                     /locus_tag="VIT19_06835"
     CDS             5551..6783
                     /locus_tag="VIT19_06835"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5838733.1"
                     /translation="MQDSGAATSDTGSLRWRTLALLAIAELLGMSLWFSGSAVVPALA
                     REWNLTESAASWLTLSVQLGFVAGTLLSALFNLPDIISSRHLFALTAIAGALVNAAFG
                     LFAEDIGIAITLRFLTGMFLAGVYPPAMKILATWFRYGRGLALGVLVGSLTLGKAAPY
                     LINGIGSESWRTNVALVSLLAAAGALIVLFFISDGPLALPAARFDWRQVGRIFRNRGV
                     RLASLGYFGHMWELYAMWTWIPFMIRASLSLRRSEPALAEVASFVVIGCGALGCVTAG
                     LLADRIGRTVVTSGAMAISASCCLLIGFAFGAHPLLLLTIAAIWGASVVADSAQFSAC
                     VTELGDPQYIGTALTMQTSLGFLLTTLSIELIPHAEKIVGWRYAFMILAPGPLFGVIA
                     MLRLRGLPEAAKIAHGKK"
     gene            6947..9388
                     /locus_tag="VIT19_06840"
     CDS             6947..9388
                     /locus_tag="VIT19_06840"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5838734.1"
                     /translation="MIGAKLGNYRILEKIGAGGQGTVYKATDTKLGRAVVIKVLPPEL
                     TVKEANLKRFEREARLASALDHPNICTIFDLNEIGGVHFIAMQFVEGKNVRELVNGRP
                     LDLCSALSITIQVADALAAAHGRGIVHRDIKAGNVMVTPTGQAKILDFGLAKLLDSED
                     LGGIHHTDLTEVGIPYGTATYAAPEQARGERVDARADIFSTGVLLYEMLTGMWPFQGK
                     TSIDVRHAVLHDDPVPLDQARPDPTPARLQAILDRTIAKNPKDRYQKADVLRDELREV
                     LRDVDNGTAFNEPLTPIVPKHLSGTSAVGRAMRWLRGVTGERTSQVRAITSERPVHET
                     PVTSVGEGDRKSVAILPFKNLSSDPESSFYEFSLADAVITELARVRSLVVRPSSEIVK
                     YQGKQVDPREAGRDMSVSAVLSAGFLRAGDRIRVTAQLVDVNSGELLWSDRIDADATD
                     IINVQDTITQEICEGLRLELSSDEKVRLEQQKTANAEAYEEYLRGRDSLGRYIYHTIA
                     RKDIDEAIERFERAAEMDPSFALAHSALGAAYASRVMKGFGEADDHAAAHEAFDKALA
                     LDPHLLEARLNMIFIYLSRGEKAKARSAVDELRREAPNDASVHFVRAVVARLDGDYEK
                     ALRSLDRMLKLNPSERVVVSYNRSRILTYLSRFDEAFAELGAGAAVEPDHPLIKTFRA
                     RALYYHGEPTKAAEILEAVLEQHPQLDGIRPIYATFLSALGFSEEARAQLTDEVIKTA
                     NTDHDIAYWLASAYAMEGERDQALQWLRRAIELGNENRPWFERDKNWDSLRDDQEHQR
                     ILNSINVPTSRDEAK"
     gene            9461..>9717
                     /locus_tag="VIT19_06845"
     CDS             9461..>9717
                     /locus_tag="VIT19_06845"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY5838735.1"
                     /translation="MKTFVVGDIHGRCAQLRGLLDLLPRDEATDTLVFLGDLIDRGPD
                     VPGCVERVSKLCRENPERVRCLRGNHEQMLLDFIDRKHTIWV"
BASE COUNT         2001 a         2728 c         2842 g         2146 t
ORIGIN      
        1 gtcgagcacc tgaatctcca tgcgctcgcg cgggtaatcg atttccgtca ccgctttaac
       61 cagccgctcg accacataca tctcgttgaa tagaggaagc tgcacggtga tgtgcggcag
      121 atcagctgcg gcgaattcgc ccttcggctt gggcgggtat ttcgagtaac gccagaagtc
      181 tatgacctgc ttgacgcgat acacgccgta aatcgccaac acggtgagaa tgccgaagta
      241 aacgatcagc accgtccaat cgaacatgtc gagctggtaa agcgggctga tgttccaggc
      301 ggacgcctgc tgcacggaat ccgaatagcc gctccagtaa cccgtttttt cgagagaatc
      361 gcagaagtct ggcgcgtcaa tgcagatgta tccgttcagc ggcggcggac aatttgtccc
      421 gtattcgaga cactttgagg ggataacttc agtcgcgaac atcgctttgt ctttcttcag
      481 tggttaccgc tgccggttgg tcgccgattc aaacgcgggc cttgaattct agcctattcg
      541 gatcgaattc catagcggat cgcatacgaa gatcagccca acgtcgcggc catcaatctc
      601 ggcgcgattg atggaccgga tgtgtccgca tgctcttgcg ttccaatggg aaaaaccttt
      661 aaatggtctc acccgacggc ttccccctat gaacgaaaaa ccggctgagc gttatctcgg
      721 gaaatcaact cgccgacttg cactcgccgt aatcaccttt ttctccgccg caactttgct
      781 ggctcccggc ttctggaccg ctaaggtggc cggtctgtgt cctgggccaa acttcaactc
      841 cgcaccgacg ttgccaattg cagggactct tcgcgccgta acgaccggag acttgaaccg
      901 agacggtaag gttgatctgg tggtggctag cggcaacgtc ccagacgccc atatctcagt
      961 ccggctgggc tcaggaaacg gtgcctttgc ggatccggtc acgctgaatg acagcgtagg
     1021 gattggcgtt gcgaaaatgg cgttggctga cttcaaccgc gatggcaacc ttgatttggt
     1081 cgcagcgacc aacgcactga tgttgaggta cgggaacgga caaggtgggt tttcaccggc
     1141 ggtcaccttc aacggcgccg ggccagtgat ggtcgtagcg gactttaacg ctgatggtct
     1201 tctggacgtg gcaaccacca gtgagggctt ggtgggaagc atacttccac gagtatctgt
     1261 tttcatcggc cagggggcgg gagggttttc tggaccgacg gtaattgagc ttgcgccaag
     1321 ttatgcgccc gacgaactag gcgtggccga tgtaaacggt gacaacaaat tggatttgtt
     1381 ggtcgcacag cgaaacggcg gcggtattgc tcgactattc ggtgacggta ctggaaactt
     1441 ttcgcttagt tatctcacca gtaccggttt caacattacc atgaccttta agattgccga
     1501 ttttaacaat gataacaagg ccgacatcat ttccgactcg ggggcaggca acggtgtcaa
     1561 cctaatgttg ggcaacggca atggcgagtt ccctaccaaa attgaactac cgaatctctc
     1621 cgcccaggac cttgtggtcg gtgattttaa tcttgatggt aagtcagatt ttgctgttgc
     1681 ccgcaggagc ggggtggcca tcatgctcgg caatggcgat ggaacatttg cgaggagaga
     1741 ctatgcggcc ggcgccgaac cgagtgccct gacgctggat gatttcaata acgatgcgaa
     1801 acccgatctg ctggtactga actcgcaatc aaatgacttt tcaattctca tcggcgacgg
     1861 actgggaaaa ttcagcgctg ctcggaccta ttctccgcag gacccagcga gtccgacggg
     1921 aattgtcact gcggacttca atggtgatgg ccagcaggat ttcgccgtgg ccagtctcac
     1981 ctcacgcaga atcctggttt tcatggcgaa cggtcaggga gagtttgccc ccgcagtggt
     2041 ctataacgta aaccccatcc tgccgaggtc attggcggtc gcggatttca acaccgatgg
     2101 caagctggat ctggcttttc ttcacggcag cgactcttcg ggtaatccga tcggaattct
     2161 tagaggaaac ggcgacggga cgttcttgcc ggtgatcagc tttgtggcat tcgttagttt
     2221 gcctacctgg ctgacagccg gtgatctgaa caatgacggc cgcccggacc tatgtatttt
     2281 ggcgggagac agactatata cgctgatcaa taatggtatt aatttcacta ccggatccag
     2341 cttttcggtt acacagaaca ttcaggtcgg ggtcggcaac ttttcgacgc acattcgggt
     2401 cgcggacctg aacggcgatg gcaaagccga catgctggta ccagtgaccg aacttttaca
     2461 tcaacgcctg tggattggtt ttggtgatgg taacggaggg atcacgagtt caaccactat
     2521 atctttcgcg tccattcaga gcgtggatgt cggggacttt aaccaggatg gcaaaccaga
     2581 tcttgcggtt actggtggtg tcgcgatcgg acaagatggg gtcttgatct tcatgggcga
     2641 tggtaatggg agtttcactt tcagagaggg tatcgccgcc ggctctgggt gggtggagaa
     2701 gggtgatttt aacggggacg gtaaactgga tttggtgacc gggggattga gcgcggtttc
     2761 tgttttgacg ggtttgggaa ccggcagctt cagtgtggcg accaactatg gggtgggggt
     2821 cgatcccaag tacctcgcga ccggcgattt taatggggac ggtaagtcgg atattgccgc
     2881 cgcgaacgtc gcaaccaggg acgtgactgt catgctcaca gtaccgtgta tcgcagcacc
     2941 gcccagccca accccttctc cgagtcccag cccgtctcca acacccagcc cgtcgccgac
     3001 gcctggggca acgccggtgc tacttaccga agaaaactca aatcgggcga tagtaatgga
     3061 cgcggtgacc atggtcagcg aagtctttcc gctgcaaaca tctttcaatt ttagttctga
     3121 ccatcggacc cggatcatgc tctttgcata caacgtgacg ttaatgccgg gtgaagggta
     3181 ttcagtagtt tcggctcagg cagagaacgc acagcatgcg atctttcaac taccgatcga
     3241 gttcgtgggt cccatcaacg gtcacccttt gactcaaatc gttgtcaggc tgcccgatgg
     3301 tttgaccgga gacgtcctgg tcagaatcag ctttcgtggc gtccccagta accaggcctt
     3361 agtcaggatt ggatcatctt gaccggatcc agacgggcga gtttttggca gcgacgcgat
     3421 cggccactcg ctccggtttt gagcctgaat tcagcacccg cccgaagctt gccactctga
     3481 cctgcctttc tgaccgatga ccccgtgacc gaaacgggaa acgccaacat ttcctaagga
     3541 aaaagcattc tagctcgtgg aatgggcgtt gcgatgcgcg aggtgcggag cgtccagccc
     3601 tctgctcccc tttgagatgt cacgcacccg actaaatcaa ttctacattt ggctcgtcgt
     3661 tctggcgggc acagcggcgc tattcttctc gctgcgcgag ttccctgtat ccaagctcga
     3721 cgtccgattc ctcgtcatgg cgctggcgac cgtaatcatc ggcccccggc tcagcattca
     3781 gattccgcgc gtccgggcgc acatctcagt ttccgacacc ttcatttttc ttaccctgct
     3841 gctgtttggc ggtgaagcag cgatcattct ggcgaccgtc gaagcaatct gctcgtcggt
     3901 acggatcagc aagcagacaa gcactcactt cttcaatgcc ggcgcgacgg ccgtttcaac
     3961 ttttcttacg gtctggtcgc tgcggctact cttcggcgag acggtcacgt ggcaggattc
     4021 gtactcgacc aatcacctcg ccgcgatttc ggcgatggcc attattcagt atgcgagtaa
     4081 ctcactgctc gtcgcgacca gcgcagcgct gaagtccgaa acatcgattt gggccacatg
     4141 gcgaaagagc ttcctgtgga cttcgattac gtatttcgcc ggcgcctcag ccgcagcgct
     4201 cattgctcgc ttcatcggca cggtgggctt cttcgccttc gtgtcaacag taccgatcat
     4261 cgcgatcgtc tacttcacgt acctgacgta tttgaagaac gtctcgagcg cggccgcgca
     4321 ggcggaacag gcgcgccagc acgtcgaaga attgaatcgc cacattgggg aacaggaacg
     4381 aatcagtaaa gcgttgcgcg aaactgaaga gcactttcgc aatgcgtttg attatgccgc
     4441 gatcggaatg gcgctcgtct cgccgcaggg ctcgtggctg cgagtgaatc gctcgctctg
     4501 cgatctgatt ggcttcaccg aagccgagct gctcgcgtcg aactttcaaa ccgtgacaca
     4561 tggcgatgac ttgcagcacg atttggcaaa cctttaccgg ttaatgcagg gcgagacgct
     4621 cacctgtcag gtcgagaagc gctacgttca ccagtcgggc cagatcgttt gggcactcaa
     4681 caatgtctcg ttggtgcggg acgttgacgg cgatccggtg catttcattt tccagattca
     4741 ggacatcact gagcgcaagc gcgtcgaggc agcgttgcaa aacctttcgc tgattgacga
     4801 gctgaccggt ttgtacaatc gccgcggatt catggcggtg actgaacagc acctcgccgc
     4861 gattcggcgg aacaagcagg tgccggtgat tctgtatgcg gacctcgacg gcttgaagac
     4921 gatcaacgat tcgttgggcc accacgaagg cgatcgcgcg ttaaagaaga cgggagatat
     4981 tctcaaggat accttccgca cctcagacat cgtggcgcgc ctgggtggtg acgagttcgt
     5041 ggtgctggcc gccatcgggc aggaagaggt tgccgattca ttgactgagc ggctacagga
     5101 aagatttgac atctgcaacg cccaggccaa ccggccatat cagctttcga tcagcgtcgg
     5161 cgtcgtccac tttgattccg ccgacacgtc gattgaagag gtcaccgcgc gcgccgatcg
     5221 cagcatgtac gaagataagc gccgcaaaca ctcacttcgc atgccgccac tcgagatggt
     5281 aaggccgctc atcgaagccg ccgcttaggt tggactgtcg cggctttgcc gccgcacact
     5341 gcggtaagcc ttcggcttac cgtgctgccg cactaccgga tctctcgccg aggctcagcc
     5401 tcggcgataa caaaaaaggt cgacttaacc ggaaaggccg agcctttccg cgatgtgctg
     5461 cgccgcaggc gctcagcgga agatttttcg ccacgcgatt ctataaatac tcagctccgc
     5521 accgagctgt tacgctacaa tccgcccacc ttgcaagact ctggcgcggc aacctccgac
     5581 actggatcac tgcgttggcg caccctggcg ctgctcgcga ttgctgagtt gctcggcatg
     5641 tctctgtggt tcagcggctc ggccgttgtg cccgcgttgg cgcgcgaatg gaacctgacc
     5701 gaaagcgccg ccagttggct aaccctctca gttcaactcg gatttgtcgc cggcacgctt
     5761 ctcagtgcgc tgttcaatct tcccgacatc atcagttcaa gacatctgtt cgcgttgact
     5821 gcgatcgcgg gggctttggt gaacgccgct ttcggattgt tcgccgaaga tattggcata
     5881 gcgatcactc tgcggttctt aacagggatg tttctggccg gagtctatcc gccggcgatg
     5941 aagatcctgg cgacgtggtt tcgctacggt cgcggtctcg cactcggtgt tctggtcggt
     6001 tcgctgaccc tgggcaaagc ggcgccgtat ttgatcaatg gaattggcag cgagagctgg
     6061 cggacgaatg tcgcgctggt ttctttgctg gccgcggccg gggcgctgat tgttctgttc
     6121 ttcatcagcg atggtccgct ggcgttgccg gcggcgcggt tcgactggcg acaagtcggg
     6181 agaatctttc gcaatcgtgg cgtgcggctc gcaagcctcg gttacttcgg ccacatgtgg
     6241 gagctctacg cgatgtggac ctggattccg ttcatgattc gagccagcct ttccttgcgg
     6301 cgcagcgaac cggcactggc cgaagttgct tcgttcgttg tgatcggttg cggcgcactg
     6361 ggttgcgtga cggctggttt gctcgccgat cgcatcggtc gcaccgtggt gacgtccggc
     6421 gccatggcga tcagcgcgag ttgttgtttg ctgatcggct tcgcgttcgg tgctcatccg
     6481 ctcctgcttt tgacgattgc cgctatctgg ggggccagtg tcgtcgccga ttccgcgcag
     6541 ttctctgcct gcgtcactga actcggcgat ccgcaataca ttggcaccgc gctgacaatg
     6601 caaacgtcgc tcggattttt actgacgact ttatcgatcg aattgattcc gcatgccgag
     6661 aagattgttg ggtggcgcta cgcgttcatg attctcgcgc cgggtccttt gtttggagtg
     6721 attgcgatgt tgcgtctgcg gggattgcct gaggcagcga agattgcgca cggcaagaaa
     6781 tagtctggag tctgcagtgc gaagtctgga gtccgggtaa cattcgccgc cgtccgaatc
     6841 gcacgaagct ttccagtcgt aatactgaac ttcagacttc gcactccaga ctccagactg
     6901 tcttcagttg cagtcatcgc cgtatcggcg tttaatatgc gaaagaatga tcggcgcaaa
     6961 acttgggaac tatcggatcc tggagaagat tggcgccggt gggcagggaa cagtttacaa
     7021 ggcgaccgac accaagcttg gtcgcgcagt tgtcatcaaa gtcctccccc cggaactcac
     7081 cgttaaagaa gccaacctaa agcgttttga acgcgaagcg cgactggcct cggcgctcga
     7141 tcacccaaac atctgcacaa ttttcgacct taacgaaatc ggcggcgtgc atttcatcgc
     7201 gatgcagttc gtcgagggca agaacgtccg cgagttggtg aatggccgcc cgctcgatct
     7261 gtgcagcgcg ctctcgatca cgattcaggt cgccgacgcg ctggccgccg cgcacggccg
     7321 cggcatcgtg catcgcgaca tcaaagccgg caacgtcatg gtcacgccca ccggccaggc
     7381 taagatcctg gacttcggat tggcgaagct cttggacagt gaagatctcg gcggcataca
     7441 ccacaccgat ttaactgaag ttggaattcc gtacggcact gcgacatacg ccgcgcctga
     7501 acaagcacgc ggcgaacggg tggatgcgcg cgcggacatt ttttcgaccg gcgtgcttct
     7561 gtacgagatg cttaccggca tgtggccgtt ccagggtaag acgagcatcg atgtgcgcca
     7621 cgccgtgctg cacgacgatc cggtgccgct cgatcaggcg agaccggatc cgacgccggc
     7681 gcggctgcag gcaatcctcg atcggaccat cgcaaagaat ccgaaagacc gttaccagaa
     7741 agccgacgta ctgcgcgacg aactgcgcga agtgctgcgt gacgtcgata acggcacggc
     7801 gttcaatgaa ccactaacgc caattgtgcc gaaacatttg tcgggaacga gtgcggtggg
     7861 ccgcgcgatg cgctggttac gcggggtgac gggcgagcgg acttcacaag tgcgcgcgat
     7921 aacttccgaa cggccggtac acgaaacgcc ggtgacgagc gtgggcgagg gcgaccgcaa
     7981 aagcgtcgcg atccttcctt ttaagaatct cagcagcgat ccggaatcga gcttttacga
     8041 attttctctg gcggacgcgg tcattactga gctcgcccgg gtgcgttcgc tggtcgtgcg
     8101 gccttcttcg gaaatcgtga agtaccaggg aaaacaggtc gatccgcgcg aagccggccg
     8161 cgacatgagt gtctctgcgg tgctctccgc aggtttcctc cgcgccggcg atcgcattcg
     8221 tgtcacagcg cagctggtcg acgtgaactc aggcgagctt ttgtggagcg accgcatcga
     8281 cgccgacgcg accgacatca tcaacgtgca agacacgatc acgcaggaga tttgcgaggg
     8341 gctgcggctg gaattgtcgt cggatgaaaa agttcggctc gaacaacaga agactgcgaa
     8401 tgccgaagcg tacgaagaat acctgcgcgg ccgcgactcg ctcgggcggt acatctatca
     8461 cacgattgca cgcaaagaca tcgacgaggc gatcgaacgt ttcgaacgcg ccgcggaaat
     8521 ggatccttcg ttcgctttgg cgcacagcgc acttggcgcc gcgtacgcca gtcgcgtcat
     8581 gaaaggattc ggcgaggccg acgatcatgc ggcggcgcac gaagcgttcg acaaggcgct
     8641 cgccctcgac ccgcatctgc ttgaagcacg cctgaacatg atcttcattt acttgtcgcg
     8701 cggcgaaaaa gcgaaggcac gctcggccgt cgatgagttg cgacgcgaag ccccgaacga
     8761 tgcgagcgtc cattttgtgc gcgcggtggt ggcgcggctc gacggcgatt acgagaaagc
     8821 gctgcggagt ttggatcgga tgctgaagct gaacccgagc gaacgcgtgg tggtgagcta
     8881 caatcgctcg cgcatcctca cgtacctgtc acgctttgat gaggcgtttg cggaattagg
     8941 cgccggcgcc gcagtcgagc ctgatcatcc gctgattaaa acgtttcgcg cgcgcgcgct
     9001 gtattaccac ggcgagccca ccaaggcggc agagattctt gaagcagttc tcgaacagca
     9061 cccgcaactc gacggcatcc gccccatcta cgcgacgttc ctgagtgcac tcggcttcag
     9121 cgaagaagcg cgcgcgcaat taaccgacga agtcatcaaa acagctaaca ccgatcacga
     9181 catcgcgtac tggctggcgt cggcgtatgc gatggaaggc gagcgcgatc aagctttgca
     9241 gtggttgcga cgcgccattg agctcggcaa cgaaaatcgc ccatggttcg agcgtgacaa
     9301 gaattgggat tcgctgcgtg acgatcagga gcaccagcgg attctgaatt caattaacgt
     9361 cccgacgtcg cgggacgaag cgaagtaagt ggcacagact tcagtctgtg aattcgtgcg
     9421 atgaaacaca gactgaagtc tgtgccacgt ttcctcatat atgaaaacat tcgtcgttgg
     9481 tgacattcac ggccgttgtg cgcagctgcg cgggctgctc gatcttctcc cgcgcgatga
     9541 agcaacggac acgctcgtct ttctcggcga tctcatcgat cgcggccccg acgtgcctgg
     9601 ctgcgtcgag cgcgtttcca aactctgtcg tgagaatccg gaacgcgtca ggtgtctgcg
     9661 cggcaatcat gaacagatgc tgctggattt tatcgatcgc aaacacacga tctgggt
//
LOCUS       DATDBY010000371         2241 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_239104, whole genome shotgun sequence.
ACCESSION   DATDBY010000371 DATDBY010000000
VERSION     DATDBY010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239104"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..1170
                     /gene="corA"
                     /locus_tag="VIT19_06850"
     CDS             97..1170
                     /gene="corA"
                     /locus_tag="VIT19_06850"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015087 - cobalt ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006824 - cobalt ion transport [Evidence
                     IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HEY5838736.1"
                     /translation="MRELYRFFFGGVVLATSDTLPQTIFTPCGPERSTLITVTCLNTA
                     TKEITENCPVPDISDLRQDPQHVVWADVSDPTSQDFSDLAEEFDFHHLSIEDCRNTHQ
                     RPKVEEYSGYYFIVLYEASLVGPDDLLELRELNIFLGKNYLVTVHSRPIRAITTARRL
                     WEEWLDRSEAGAGLLAYLLIDAIVDDYLPLLDIISERMDDLEDSIFGEWRAAVIEEIF
                     MVKKKLLYLRRAITPLRDVFNTLLRREQPIFPRETHVYFQDVFDHLIRVADNIDTLRD
                     MLSSTMDAYLSVSGNRMNKVMKRLTSVSTILMSVTLIAGIYGMNFVFMPELRWRYGYI
                     FALLSIVGVGLALYAYLKKVDWL"
     gene            1167..1484
                     /locus_tag="VIT19_06855"
     CDS             1167..1484
                     /locus_tag="VIT19_06855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838737.1"
                     /translation="MKGKEVSVHPVRPRSGDTRELAAQLAPLEELRESSEAGTNGSQL
                     VAQENGAIVVGADQPELAKELVVAEARNGALGVEPVVIVIVGLLLAFIVFIAWQISRM
                     PAD"
     gene            1513..>2241
                     /locus_tag="VIT19_06860"
     CDS             1513..>2241
                     /locus_tag="VIT19_06860"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEY5838738.1"
                     /translation="MEIFVYREGAERVESGFTAEQLPELLKDEKAVVWIDMEAPTEAN
                     EQLLSNLFHFHPLTLEDCRETRNYPKVEEFPGYLYFIVHGVRADTSPDHFNTIELDAF
                     LGPNYVITYHHEMFRSINNVKKLVTTTPVACQRGPAYLLHQILDQIVDFYSPVLDDFD
                     ERIAKLEDDIFTLRRPNQAILEEIMDLKRGVLRLRRISARQMEVILRTSRGEFALIPP
                     PMLPFYRDIHDHIIRITDLAESYRD"
BASE COUNT          504 a          605 c          592 g          540 t
ORIGIN      
        1 ccagttcgct tctcgacctg gaatcctgcg tcgcgcaacg gttgaagtcc gctgtcgcta
       61 acgtcatccg aaaccagaat cctctgtgca ctcatcgtgc gcgaattata tcggtttttc
      121 ttcggcggcg tcgttcttgc cactagtgat acactgccgc aaacgatttt tacgccgtgc
      181 ggtccggaga gatcgacttt gattaccgtc acttgcctga acactgccac taaggaaatc
      241 acagagaact gtcccgtccc ggacatcagt gaccttcgcc aggatcctca gcacgtagtt
      301 tgggccgacg tcagcgatcc tacgagccag gacttttcgg atctggctga ggagttcgac
      361 tttcatcact tgtcgatcga ggactgtcgt aacacgcatc aacgtccaaa ggtcgaagaa
      421 tactccggtt actatttcat cgttctctat gaagccagtc tcgtcgggcc agacgacctc
      481 ctcgagttgc gcgaactgaa catctttctc gggaagaact atctggtgac ggttcacagt
      541 cgcccgatcc gcgccatcac caccgcgcgc cgcctttggg aggaatggct cgatcgatcc
      601 gaagcgggcg ccggactgct tgcttacctg cttatcgatg ccatcgttga tgactacctc
      661 ccgcttctcg acatcatcag cgagcggatg gacgatttgg aggactcgat attcggagaa
      721 tggcgggccg cggtcatcga agaaatcttc atggtaaaga aaaaactcct ttacctgcgc
      781 cgagcgatta ctccactgcg cgacgttttt aataccctgc tcagacgcga gcagccgatc
      841 tttccccgcg agactcatgt ctatttccag gacgtattcg atcatctgat tcgcgtcgcc
      901 gacaacatcg acacgctgcg cgatatgttg agctcaacga tggacgctta cctgtcggtg
      961 tcggggaatc ggatgaacaa ggtaatgaag cgcctgacat cagtctcaac aattctgatg
     1021 tcggtgactt tgattgcggg catctacggc atgaacttcg tgttcatgcc cgagttaaga
     1081 tggcgctacg gctacatatt cgcgctgcta agtatcgttg gcgtcggcct ggcgctgtat
     1141 gcttatctca agaaagtgga ttggttgtga aaggcaagga agtctcagtt catcctgttc
     1201 gacctcgctc gggtgacacg cgcgagctgg ctgcgcagtt ggcgccgttg gaagaattgc
     1261 gcgagtcgag tgaggctggc accaatggct cgcaactcgt ggctcaggaa aatggggcaa
     1321 tcgtagtcgg tgctgaccaa cccgaactcg ctaaagagct agtcgtggcc gaagcgcgaa
     1381 atggtgctct gggcgtggaa ccagtcgtca tcgtcatcgt aggattgtta ctggctttta
     1441 ttgtgttcat cgcatggcaa atctcgagga tgccggccga ttagaatcaa ctaaataaga
     1501 gagaaacccc tgatggaaat ctttgtctat cgcgaaggcg cggaacgggt cgaatccggc
     1561 ttcaccgctg aacaattacc cgaacttttg aaagacgaaa aagcggtcgt ctggattgac
     1621 atggaagcgc cgactgaagc gaacgagcag cttttgagta acctatttca ctttcatccc
     1681 ctcacgctgg aggattgccg cgagaccagg aattatccga aggtcgaaga gttccccggt
     1741 tatctttatt tcatcgtgca cggcgtgcgc gccgacacca gtcccgatca tttcaacacg
     1801 atcgagctcg atgcgtttct cgggccgaac tatgtcatca cttatcacca cgagatgttt
     1861 cgcagtatca acaacgtgaa gaagctggtg acgacaactc ccgtcgcatg tcaacgcggg
     1921 ccggcgtacc tgttacatca aatcctggat cagattgtcg atttctattc gcccgtgctc
     1981 gacgatttcg atgaacggat tgcgaaactc gaagacgaca tcttcacttt gcgccgtccg
     2041 aatcaggcga tccttgaaga gattatggat ttgaaacgtg gcgtgcttcg tctgcggcgc
     2101 atctcagcgc ggcagatgga ggtgatcctc cgcacgagcc gcggagagtt tgcattgatt
     2161 ccgccaccga tgttgccgtt ctatcgagac attcacgatc acatcattcg cataactgac
     2221 ctggctgaga gctatcgcga t
//
LOCUS       DATDBY010000372         2436 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1649930, whole genome shotgun sequence.
ACCESSION   DATDBY010000372 DATDBY010000000
VERSION     DATDBY010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1649930"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1533)
                     /gene="yidC"
                     /locus_tag="VIT19_06865"
     CDS             complement(<1..1533)
                     /gene="yidC"
                     /locus_tag="VIT19_06865"
                     /inference="COORDINATES: protein motif:HMM:TIGR03593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEY5838739.1"
                     /translation="MKSQQRFIFALVASAAVLIGWNYMFPPVAPPPPPPDANANVNAN
                     QQVAQASPQSTAQASAQGSPSTTPQPTATATPSSAQPAASPTPPPEVVPQRKIRVVTP
                     LYEATFDTRGAVATSWIVKQVKRSDGTLRKIYGEGSTHDNPKPLELVTKRPEAVAAEK
                     TFQPFQIVTGDATLDSLLAGNNFKVAGPVANSGDTTVDVTSAGQSIVFTLNDPATGTD
                     VTKEITFFPDRYLTEVKVKVVRNNQAQPAKLAIGPSVGDQGIAYYGFYLYPPEGLAMI
                     NGEARRIPSLEVHADRRNTGTINWMMESIGLKSPVPKPVDQETIDGQVQWAGVDDTYF
                     GMVGVLAKPATGLEYRTAVYEHKYDGNTEQRFLVTGLLPVPTDGSKTDIYIGPKDHRL
                     LDEASAQVKAAGGPQVDLGEVINYGFLGGMRRALAIPILWAIEKLQRMTGSYGVAIIL
                     FTVFIYSLFMPLKWVSSRKMKKAQKYAPRMKKLQEELKGMKQTDPRLKELQMEQLRLM
                     KEA"
     gene            complement(1661..1870)
                     /gene="yidD"
                     /locus_tag="VIT19_06870"
     CDS             complement(1661..1870)
                     /gene="yidD"
                     /locus_tag="VIT19_06870"
                     /inference="COORDINATES: protein motif:HMM:NF013932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEY5838740.1"
                     /translation="MRHILVSFLKFYKAVISPWLPPSCRFTPTCSEYACEAIERHGAL
                     RGSGMAIWRLLRCNPFCASGHDPVN"
     gene            complement(1985..2386)
                     /gene="rnpA"
                     /locus_tag="VIT19_06875"
     CDS             complement(1985..2386)
                     /gene="rnpA"
                     /locus_tag="VIT19_06875"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEY5838741.1"
                     /translation="MIAATDDAPAKLSFALPKQRRLRARAEFQKAYAEGQRYDGRLMA
                     AFLRANDATEHRLGVTASTKAIGKSVDRVRAKRLLRELFRRSLTDLGALRQRYDWVIN
                     AKRSLLTSTEELRFKEFRRIVEQVARAEGEK"
BASE COUNT          493 a          718 c          684 g          541 t
ORIGIN      
        1 cgcttccttc atcaaacgca gttgctccat ctgcaactct ttcaaccgcg gatcggtctg
       61 cttcattccc ttgagctctt cttgcagctt cttcatgcgc ggcgcgtatt tctgcgcctt
      121 cttcatcttg cgggacgaga cccacttcaa gggcatgaac agcgagtaaa tgaagaccgt
      181 gaagagaatg atcgcgaccc cgtagctgcc ggtcatgcgc tgaagttttt caatggccca
      241 aaggattggg atcgcgaggg cgcgccgcat gccgccgaga aatccgtagt tgattacttc
      301 gccgagatcg acctgtgggc cgcccgccgc tttaacttga gcactggctt cgtcgagcag
      361 gcggtgatct ttcgggccaa tgtagatgtc cgttttcgat ccgtcagtcg gaaccggtag
      421 caggccggtg accagaaatc gctgttccgt gttcccgtcg tatttgtgct cgtagacggc
      481 agtacggtat tcgaggcccg tcgcgggttt agctaacacc ccgaccattc caaaatacgt
      541 gtcatcgacg ccggcccatt gaacctggcc gtcgatcgtc tcttgatcga ccggcttcgg
      601 caccggcgac ttcaacccga tgctttccat catccagttg atggtgccgg tgttgcgacg
      661 gtcagcgtgc acttccaacg aagggatgcg gcgcgcttcg ccgttaatca tggcgaggcc
      721 ttccggcgga tagagataga aaccgtaata agcgatgccc tgatcgccga cgcttggccc
      781 gatcgcgagt ttcgccggct gcgcctgatt gttgcgtacg accttaacct tcacttccgt
      841 gaggtagcgg tcgggaaaga atgtaatttc cttcgtgaca tcagtcccgg tcgccggatc
      901 gttcaacgtg aaaacgatgg attgccccgc cgacgtcaca tcgaccgtcg tgtcaccaga
      961 gtttgccacc gggccggcaa ccttgaagtt gtttccggcg agtaagctat cgagcgtcgc
     1021 gtcaccagtg acaatttgaa atggctgaaa agtcttttcg gccgccactg cctccggacg
     1081 tttcgttacg agttccagcg gtttgggatt atcatgcgtc gatccttcac cataaatttt
     1141 ccgcaacgtt ccgtcactgc gcttaacttg ctttacgatc caactggtgg cgaccgcgcc
     1201 gcgggtatcg aatgtcgctt cgtaaagcgg agtgacgacg cggatcttgc gctgcggaac
     1261 aacctcgggt gggggggtcg gtgaagccgc tggttgcgcg gacgaaggtg tggcggtcgc
     1321 ggttggttgc ggtgtggttg acggcgaccc ttgtgcagat gcctgcgccg tcgattgcgg
     1381 cgaggcttgc gcgacctgtt gattcgcgtt gacgttcgcg ttggcgtccg gcggcggcgg
     1441 cggcggcgca acgggaggaa acatatagtt ccaaccaatc agcaccgcgg cggacgcgac
     1501 taacgcaaaa ataaatcgtt gttgtgactt cattcgaact cttaattgcc cgacatattt
     1561 actttgcgtt agctttgcgt ctttgcggct tggcgtgaaa gagcctcacg caaaggcgcc
     1621 aagtcgcaaa ggaacgcaaa gacagcggca ctcaaaaaca tcaattcacc ggatcgtgac
     1681 cactcgcgca gaaagggtta caccgaagca aacgccatat cgccatgccg cttccgcgca
     1741 gcgccccatg acgttcaatt gcctcgcacg catattcaga acaagttgga gtgaaacggc
     1801 aggacggcgg cagccacggc gagattactg ctttataaaa cttcaaaaac gaaaccagta
     1861 tgtgccgcat ttttggagcg cggtggcaag cgcagcgcga caccgctttg gattcgcacg
     1921 aaacgaatct cccctatcaa accaaagcgc cgtcgccgct gcgctctgcc ggcgcactcc
     1981 aaatctattt ctcgccttcc gcccgcgcca cctgctccac aatcctacga aactctttga
     2041 accgaagttc ttcagtcgaa gtcagcaaag accgcttggc gttgatgacc caatcgtaac
     2101 gctgccgaag cgctcctaag tctgttaggc tgcggcgaaa cagctcgcgc agcaaacgtt
     2161 tcgcgcggac ccgatcgacc gacttgccaa tggcctttgt tgaagccgtc acgccgagcc
     2221 ggtgctcagt cgcgtcattt gcgcgtaaaa aagcggccat caagcggccg tcatagcgct
     2281 gcccttcggc ataagctttc tgaaactcag cccgcgcgcg cagccggcgc tgtttcggca
     2341 gcgcaaagct caatttcgcc ggcgcgtcat cggtggctgc gatcaacttt ctagtaatgc
     2401 gacggggtca ggcgcttgcg gcccttcgcg cggcgc
//
LOCUS       DATDBY010000373         2452 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1938135, whole genome shotgun sequence.
ACCESSION   DATDBY010000373 DATDBY010000000
VERSION     DATDBY010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2452
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1938135"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..1542)
                     /locus_tag="VIT19_06880"
     CDS             complement(28..1542)
                     /locus_tag="VIT19_06880"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5838742.1"
                     /translation="MIELRNITKRFGAVLANDAVSIKVEPGTIHAIVGENGAGKSTVM
                     RIAYGFYTSDSGEILINGQAREIRTPHDAIAAGIGMVHQHFMLVEPMTVAENIVLGAE
                     PGNAASLDLKKAAAEIRKVSDEFKLAVDPNATIESLSVGQQQRVELLKALYRQAQLLI
                     LDEPTAVLTPQEVEEFFAILRSMRAQGKTIVIITHKLDEVLAISDNVTVMRDGKVVGN
                     VKTSETNAAELARMMVGREVLLRVDKPEAKPGGAVVDVRGLSIVGRDGTKRLNNVSLE
                     IRAGEIVGIAGVEGNGQTELIEALAGLIPGSHITGTINFEGRDITRSDARRRKELGIA
                     HVPEDRHRRGLLLDSSLAENTILGVHYRKPAVMGPGLVILNERGIQRRTEQVIRDFDV
                     RPPNPALPARALSGGNQQKLIIGREFELPPKLLLVSQPTRGVDIGAIEFIHRKIVEMR
                     DAGCAVLLVSAELEEVTALSDRLIVVHNGEIVGEVDPKVATTEEIGLMMTGGHG"
     gene            complement(1735..>2452)
                     /locus_tag="VIT19_06885"
     CDS             complement(1735..>2452)
                     /locus_tag="VIT19_06885"
                     /inference="COORDINATES: protein motif:HMM:NF014647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY5838743.1"
                     /translation="YPNIRFAIIDGVIFEDDGTTPKANVASLVFKEHEGSYLVGIIAG
                     MTSKTGVVGFIGGMDIGLIHRFQGGYEQGAKSVNPNIQVIQNYVGVTDAAWNNPGKGK
                     EIALAQISKGADVIFTAAGNSGLGAFDAVEQAGTVNGRATHFVIGVDSNQNMVKPGFV
                     LTSMIKRVDNAVYDIVKNVVEGKFQGGFHVFGLESDGVGYVMDNHNEKLVSPEAIKAS
                     EEAKKKIIAKEITVIDRMFQ"
BASE COUNT          521 a          722 c          600 g          609 t
ORIGIN      
        1 ccggaaagag gatctcgcga agaagtttca tccgtgtcct ccggtcatca tcagcccaat
       61 ttcttcagtt gtggcaactt tcggatcgac ttcaccgaca atctcgccgt tgtgaaccac
      121 gattagacga tccgacaggg cagtcacttc ttccaattcc gccgacacga gcagcacagc
      181 acaacccgca tcgcgcatct caacgatctt tcggtgaatg aattcaatcg cgccgatatc
      241 gacgccgcgc gtcggctgtg agaccagcag gagcttcggt ggcagctcga attcccttcc
      301 tataatcagt ttctgctggt tgccgcctga aagtgctcgc gcaggcagcg ccggattggg
      361 tggcctcaca tcgaaatcgc gaataacctg ctctgtccgg cgttgaattc ctcgttcgtt
      421 aaggattacc aaacccggtc ccatcaccgc gggcttccga tagtgaaccc ccaggatcgt
      481 gttttccgcg agactggaat ccagcaaaag tccgcgccgg tgacgatctt caggaacgtg
      541 cgcgataccg agctcctttc gtcttcgcgc atcggagcgt gtgatgtcgc ggccttcgaa
      601 attaatcgtg ccggtgatgt gggatccggg aatcaaaccg gccagagctt cgattaattc
      661 cgtctgcccg ttaccttcga cgccggcgat gccgacgatt tctccagcac ggatttccag
      721 ggaaacattg ttcaggcgct tcgtcccgtc acgccctacg attgaaagac cgcgcacgtc
      781 aacgacggcg ccaccgggtt ttgcctcagg tttatcgacc cgcaaaagca cttcgcgacc
      841 aaccatcatg cgcgccaatt cggcggcgtt tgtctcgctc gttttaacgt tacccacaac
      901 tttgccgtcg cgcatcaccg tcacgttgtc ggaaatcgcg agcacctcat ccagcttgtg
      961 cgtgatgatt acaatcgtct ttccctgggc gcgcatcgag cgaaggattg cgaagaactc
     1021 ttcgacttcc tgcggcgtca gcacggcagt tggctcatca agtatcagca actgcgcctg
     1081 acggtagagt gctttaagca attcaacgcg ctgttgttga ccgactgata agctctcaat
     1141 cgtggcgttc ggatcaaccg cgagtttgaa ttcatctgaa actttgcgga tttctgcggc
     1201 agctttcttt agatcaagag aagctgcgtt gcccggttcc gccccgagca caatgttttc
     1261 cgcgacagtc atcggttcaa ccagcatgaa gtgctggtgc accatgccaa tgccggccgc
     1321 aatcgcgtca tgcggggtgc gaatctcgcg cgcctggccg tttatcagaa tctcgccgct
     1381 gtcggacgtg taaaagccat aagcgatccg catgacggtc gatttacctg cgccgttttc
     1441 gccgacgatg gcatgaatgg ttccgggctc aaccttgatg ctgacggcat catttgcgag
     1501 taccgcccca aaccgcttcg tgatgttgcg taactcaatc attagttact agtcagttgt
     1561 acgatcgcta gtgctttgta cttcgtgctt tgtacttcgt acttggtact ttgatttttt
     1621 cacccaggcc cgccctcaat ttaaaggtgc tgtggggatt acacatcaaa gtacaaagaa
     1681 ctaagtacca agaacaaaag tacaactgac aactgactac tgaccactga caaattactg
     1741 aaacattcga tcgattacgg tgatttcctt ggcgatgatt ttctttttgg cttcttccga
     1801 tgctttgatg gcctctggtg aaacaagctt ctcgttgtga ttatccatca cgtaaccaac
     1861 cccgtcgctt tccagcccga agacgtgaaa gcctccctga aactttcctt cgactacatt
     1921 cttcacaatg tcatacaccg cgttatccac gcgtttgatc atgctggtca ggacaaatcc
     1981 cggcttcacc atgttctggt tggaatcgac gccgattaca aaatgtgtcg cgcggccgtt
     2041 cacggtcccc gcctgctcga ctgcgtcgaa cgcgccgagt cccgagtttc ccgccgccgt
     2101 gaaaatcaca tcagcgcctt tactaatttg cgccagggcg atctcttttc cttttccggg
     2161 attgttccag gccgcgtccg tgacgccgac gtaattctgg atgacctgaa tgttggggtt
     2221 caccgacttg gcgccctgct cgtacccgcc ctggaaccgg tgaatcagtc cgatgtccat
     2281 cccgccaatg aagccgacca cgcccgtctt tgaagtcatg ccggcaatga tgccgaccag
     2341 atacgaacct tcgtgctctt tgaagaccag cgacgcgaca ttagctttcg gcgtcgtgcc
     2401 gtcgtcttcg aaaatcactc catcgataat cgcaaagcgt atgttcggat aa
//
LOCUS       DATDBY010000374         2211 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1847482, whole genome shotgun sequence.
ACCESSION   DATDBY010000374 DATDBY010000000
VERSION     DATDBY010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1847482"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1175)
                     /locus_tag="VIT19_06890"
     CDS             complement(<1..1175)
                     /locus_tag="VIT19_06890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838744.1"
                     /translation="MFKRFSFALVFTACALGIAHAQTAAPAQTPRPSAPAQNTQPAFD
                     LAEYGVRLEPDQRLIVVMAALDAAGFDPTGTGKERSAFRSLVRKDNASLDPGLRERLK
                     TFFERNKLPATATAAQQAARYVSLAYALGPVPSLDPPARSDDLPGGVLEVLDFAQLVR
                     EYYQKSGIDERLVSYLRAYQAEGDRIRKPAGEMVRAVLSYLHTRPIITTLERVRVQSP
                     DNKKNAKTATTIVEHERRFFIVPDLLATPGVINLRIITDDYYAIVPEGTDPTSSELRR
                     AYIQYVMDALVLRNNKAIAARREQVKQLIDARTKEGATISPDVFVVVARSLVAGADAR
                     FEEANRLAHVDALQRARLARAKDDATRATIARDAQTARAAIADEAIARLAEDYENGAA
                     "
     gene            complement(1283..2077)
                     /locus_tag="VIT19_06895"
     CDS             complement(1283..2077)
                     /locus_tag="VIT19_06895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838745.1"
                     /translation="MLNPRSHFHRVLQEALTARGLTLAEICPAHDAIAQRVLCDYGAI
                     HVGSKEILPPPICVFTSEAAVAGFQKAAGWDTAEIDEHLIELQPAAMKALLKARAVAL
                     AEGLNISPRDGAEGTRRTYDDTVRLWNSRFLPALDHWQELGRLTQQQTDRLRSLPVIE
                     QVAEVLELEKDEIFFSKDFSKSVLYSIAAPGTSQHIAMLAFDANEFSEPRVREIFADH
                     GWFQTVMSDLPHFTFLGLKEAELPARGLKSVEVHGQKFWIPDVDCP"
BASE COUNT          469 a          652 c          634 g          456 t
ORIGIN      
        1 gcggcgccgt tctcgtaatc ctcagccaat cgagcgatgg cttcgtccgc gatcgccgcc
       61 cgcgcggttt gcgcatcacg agcaatggtc gcacgcgtcg cgtcgtcttt cgcgcgagcc
      121 aatcgcgcgc gttgcaacgc atccacgtgg gccaaacgat ttgcctcctc aaatcgggca
      181 tcggctccgg cgaccaggga tcgcgccacc accacgaaca cgtccggcga aatagtcgcg
      241 ccttcttttg tgcgggcgtc aatcaactgc ttgacttgct cgcggcgcgc ggcgattgct
      301 ttgttgttac gcagcaccag cgcgtccatc acgtactgaa tgtacgcgcg gcgtaattcg
      361 gaggaagtag gatcagtccc ctcaggaacg atcgcgtaat agtcgtcggt gataatacga
      421 aggttgatca cgcccggcgt cgccaacaaa tccggaacga tgaaaaagcg gcgttcatgt
      481 tccacgattg tcgtcgctgt cttcgcgttc tttttgttgt cgggactctg gactcgcaca
      541 cgttcgagcg tcgtgataat cggccgcgtg tgcaggtaag acagaaccgc gcgtaccatt
      601 tcgcctgccg gtttgcgaat gcgatcaccc tcggcctgat acgcacggag gtacgagact
      661 aatcgctcat caatgcctga tttttgatag tactcgcgca cgagctgcgc aaaatccaac
      721 acctcaagca cgcctccggg caaatcgtct gaacgcgcgg gcggatcgag tgaaggcacc
      781 ggtccaagtg cataggccaa cgaaacgtaa cgcgccgcct gttgggctgc ggtagcagtt
      841 gcgggcaatt tattgcgttc aaaaaacgtc ttcaagcgct cgcgcaaacc cggatcgagc
      901 gacgcattat ccttgcgcac gagcgagcga aatgctgaac gttctttgcc ggtcccggta
      961 ggatcgaatc cggcagcgtc cagcgcagcc atcaccacga ttagcctctg gtcgggttcg
     1021 agccgaacgc cgtactcggc taagtcgaaa gccggctgag tattctgcgc cggggcgctg
     1081 ggtcgtggcg tttgcgccgg tgcggcagtt tgcgcatgag cgatgcccag cgcgcaggcc
     1141 gtgaaaacta gagcaaagga aaatcgctta aacatgggtg cggttcagga attaatgatg
     1201 ttagcggatg cgttagccac ttccaaacgg tcgagaaagg tcagatgttc gcgagcggcg
     1261 ggtagatgcc aaatgcgcct catcaggggc aatccacgtc gggaatccag aatttctgac
     1321 catgcacttc tacggatttc aagcctcgcg ccggcagttc cgcctccttc aggccgagaa
     1381 acgtgaaatg cggcaggtcg ctcataaccg tctgaaacca tccgtggtcg gcgaaaattt
     1441 cgcgcactcg tggttcggag aattcgttcg cgtcgaacgc cagcatggcg atgtgttgcg
     1501 aggtgcccgg cgccgcaatc gaatacagca ccgattttga aaagtctttg ctgaagaata
     1561 tctcgtcctt ctcgagctcc aacacctcag ctacctgctc gatgaccggc aagcttcgca
     1621 gccggtctgt ctgctgctgc gtcaaacgcc caagctcttg ccagtgatcc aaggccggca
     1681 gaaaacgcga attccaaagc cgcacagtat cgtcataagt gcggcgggtc ccttcagctc
     1741 catcgcgcgg agaaatgttc agcccttcgg ccagcgccac ggcacgcgcc ttcaacagcg
     1801 ctttcatcgc ggcgggttgt aactcgatca ggtgctcgtc gatttccgcg gtgtcccaac
     1861 cggcggcctt ctgaaaacct gcgaccgctg cttctgaagt gaacacgcag atcggcggcg
     1921 gcagaatctc tttgctgccc acatgtatcg cgccgtagtc gcacagcacg cgctgcgcga
     1981 ttgcatcgtg cgccggacaa atctccgcca gcgtcaagcc gcgcgcggtc agcgcctctt
     2041 gaagaactcg atggaagtgt gaacgggggt taagcacgcg agtcaaggac gagccataat
     2101 aatcgcgtcg ggcttatccg ccaactgcgc gttatactcg acgctcaagg attcattgga
     2161 gctaatgaag gatatcatcg ctacttatga gctacatggc tggaaattgc g
//
LOCUS       DATDBY010000375         3698 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2335363, whole genome shotgun sequence.
ACCESSION   DATDBY010000375 DATDBY010000000
VERSION     DATDBY010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3698
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2335363"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="VIT19_06900"
     CDS             complement(<1..413)
                     /locus_tag="VIT19_06900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838746.1"
                     /translation="MDRDTVSHLLAEVASGKLSPDEALEKLRWQPVEPIGDFARLDHH
                     RALRQSMPEFVYGEGKSPEQLAAIMGAMVERTGRALATRVTTAHFEAVREVLPDVVHH
                     PKARILVVNSFPKSEAGQALVIAAGTSDVPVAEEAA"
     gene            complement(406..1266)
                     /gene="larE"
                     /locus_tag="VIT19_06905"
     CDS             complement(406..1266)
                     /gene="larE"
                     /locus_tag="VIT19_06905"
                     /inference="COORDINATES: protein motif:HMM:TIGR00268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent sacrificial sulfur transferase
                     LarE"
                     /protein_id="HEY5838747.1"
                     /translation="MNNLSLTKRRDNEALPAHLQAKFERFKDLIAGFERVLVAFSGGV
                     DSTLVAQLAADVLGRDNVLAAIAISPSLGQDEQRDALRLLDEIGISHVQVETNEVEDP
                     RYAANPINRCYFCKEHVYAALTDLARQHGFETVLDGFNAEDTSDFRPGRKAGRELGVR
                     SPLCEVGLTKDEVRALARHLGLRNWDKPQMACLSSRVEYGITITPKILSQVDRAEMAL
                     RRLGFADLRVRHHDKLARVEVEQQMIPRALAQRDEIVAAVRAAGYTHVTIDLAGLRHG
                     SMNEGFVKHG"
     gene            1403..2506
                     /locus_tag="VIT19_06910"
     CDS             1403..2506
                     /locus_tag="VIT19_06910"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF006707.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HEY5838748.1"
                     /translation="MATEMKRSTETIDRIEELLGADARTLLDFKSTLIPKEQLHLPGP
                     DYIDRVVSESDRSPAVLRSLQSLISNGRLANTGYVSILPVDQGIEHSGGASFAPNPQY
                     FDPENIVKLAIEGGCNAVASTYGVLGSVARKYAHKIPFIVKINHNELLTLPNKFDQIM
                     FGTIKEARDLGAVAVGATIYFGSDESTRQITEVAEAFARAHELGMACILWCYLRNSKF
                     KTPEGDMHSSADLTGQANHLGVTIQADIVKQKLPERNGGYLAVEKELGKSYGKTHKLV
                     YEKLSTDNPIDLVRYQVANGYMGRVGLINSGGESKGASDMAEAVRTAVINKRGGGMGL
                     ISGRKAFQRPMNEGVQLLNAIQDVYLSKEITIA"
     gene            2586..3449
                     /locus_tag="VIT19_06915"
     CDS             2586..3449
                     /locus_tag="VIT19_06915"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY5838749.1"
                     /translation="MPTSIRWKHDRPVRRAVKAQPRPLSTLKSVLAQAAKHALTEPFM
                     LSIERHEVLLKRLPPKLDGLRIVHLSDFHYGPLVNPKHLERAVKAANDLRPDVIALTG
                     DYISQDRMYAEPCAEVVGKLRARYGVYAVLGNHDHWTDATLIADLFRAEGVRVLINEG
                     TRMDLRGESFWLAGVDDTMVGLEDLSLALAGSSEDEFKLLLAHNPIILRRAARVSVDL
                     VLSGHTHGGQVTWRSEKSRSGRPRRRMLRGLGRRGNTQIYVTRGLGTVVLPIRYGCPP
                     EVSVLELRSAS"
BASE COUNT          801 a         1100 c         1011 g          786 t
ORIGIN      
        1 gccgcttctt ccgcgaccgg cacatcggac gtgcctgccg cgattaccaa cgcctgtcct
       61 gcttccgatt tcggaaaact gttgactacg aggattcgcg ctttcgggtg gtgcacaacg
      121 tccggcagca cctcccgcac ggcttcgaag tgcgccgtcg taacccgcgt cgccagcgcc
      181 ctgcccgtcc gctcaaccat cgcgcccatg attgcggcga gttgttccgg cgacttgcct
      241 tccccgtaaa caaactcagg catgctttgc cgcaacgcgc gatgatgatc cagccgcgca
      301 aagtcgccga tcggctcgac cggctgccag cgcagttttt ccagcgcttc atcgggcgac
      361 aatttgccgc tcgcgacctc cgccagcaaa tgcgaaacag tgtctctatc catgcttaac
      421 gaatccttcg ttcatgctgc cgtggcgcag ccccgccagg tcgatcgtca cgtgggtgta
      481 gccggccgcc cggactgcgg cgacgatttc atctcgctgg gccagggcac gcggaatcat
      541 ctgctgctcg acttcgacgc gcgcgagttt gtcgtgatgc cggactcgca gatcggcaaa
      601 cccaagccga cgcaaagcca tctcggcacg atcgacttga gacaaaatct ttggcgtgat
      661 cgtgattccg tattcaactc ggctcgataa acaagccatc tgcggcttgt cccaattgcg
      721 caatcccaga tggcgagcca gcgcgcgaac ctcatctttg gtgaggccca cttcgcagag
      781 tggactgcgc acgccaagtt cgcggccggc cttgcgtccc ggccgaaagt cgctcgtgtc
      841 ttcggcgtta aagccatcca ggacagtttc gaatccgtgc tgccgcgcga ggtcagtcaa
      901 agcagcgtaa acatgctctt tacaaaagta acaacggttg attggattcg cggcgtaccg
      961 cgggtcttca acttcgttcg tttcgacctg gacgtgcgaa attcctatct catcgagcag
     1021 gcgaagtgcg tcacgctgtt cgtcctgacc caggctgggc gaaatcgcaa tggcggcaag
     1081 cacattgtca cggcctaaaa catcagccgc caattgcgct acgagcgtac tgtccacacc
     1141 gcctgagaat gcgacgagca cgcgctcgaa accggcgatg agatctttga atctctcgaa
     1201 tttggcttgt aaatgggccg gcagcgcttc attgtcgcgt cgcttggtca gactcaggtt
     1261 gttcatgatt cgtttcggcc gccagtttag cattaacctc gcgcgtgttc atttccgctc
     1321 gctccagatg atataattcg caccactcgc aataatccaa cttagtacgg cgcgacatac
     1381 gcccgtaact ggaggaacag gtatggccac agaaatgaaa cgatccacgg aaacaatcga
     1441 tcggattgaa gaactgctcg gggcggatgc aagaaccctg ctcgacttca aatcgacatt
     1501 gatccctaaa gagcaattgc acctgcccgg cccggattac attgaccgcg tggtgtccga
     1561 aagcgatcgt tctccagctg tgcttcgttc gttgcaatcg ttaatcagca atggccgcct
     1621 ggccaacacg ggttacgttt cgattctgcc ggttgatcaa ggcatcgaac actccggcgg
     1681 cgcttcattc gcgcctaatc cgcagtattt cgatcccgaa aacattgtga agctcgccat
     1741 cgaaggcggt tgcaacgcgg tcgcttcgac ctacggcgta ctcggcagcg tcgcccggaa
     1801 atacgcgcac aagattccat ttatcgtaaa gatcaatcac aacgaactgc tcacgctgcc
     1861 aaacaaattc gatcagatta tgttcggcac gattaaagag gcgcgggatc tgggcgcggt
     1921 cgccgtcggg gcgacgatct atttcggttc ggacgaatcg acgcggcaaa tcaccgaagt
     1981 cgctgaggcg ttcgcgcggg cacatgaact tggcatggcg tgcattctct ggtgctacct
     2041 gcgcaactca aaattcaaga ctcctgaagg cgacatgcac tcgtcggcgg atcttaccgg
     2101 ccaggcaaac catctcggcg taacgattca agccgacatc gtcaagcaaa agctgcccga
     2161 acgtaacggc ggctatctgg ccgtcgaaaa agaactcggc aagtcgtacg gcaagacgca
     2221 caagctcgtt tacgaaaaac tctccactga caatccaatc gatctggttc gctatcaggt
     2281 cgcgaacggc tacatgggcc gcgtcggtct gatcaattcc ggcggcgaat caaaaggcgc
     2341 gagcgacatg gctgaagccg tgcgcacggc ggtcatcaac aaacgcggcg gcggcatggg
     2401 cctgatttcc ggacgcaaag cattccaacg tccgatgaat gaaggcgtcc aactgctgaa
     2461 tgcgattcag gacgtctatc tttcgaaaga aattacgatc gcctaaacat cgaagcaaaa
     2521 caatcgcttc gcattgcgaa agtgagagcg ggtacctata atccgctcgc tttccctaag
     2581 ccggcatgcc aacttcaatt cgctggaaac acgatcgccc ggtgcggcgc gcagtcaaag
     2641 cgcaaccgcg tccgctgagt acgctcaagt ctgtgctcgc gcaagcagcc aaacatgcgc
     2701 tcacagagcc gttcatgctt tcgatcgagc ggcacgaggt tcttctgaag cgactgccgc
     2761 ccaagctgga cggcctccga atcgttcatc tttctgattt tcactacgga ccgctcgtca
     2821 acccgaagca tctcgagcgc gccgtcaaag ccgccaacga cctgcggccg gatgtgattg
     2881 cgctaacggg cgattacatt tcgcaggatc gaatgtacgc ggagccttgc gcggaagtgg
     2941 tggggaaact gcgcgcgcgc tatggcgtgt acgcggtgct gggaaatcac gatcactgga
     3001 ccgacgccac gttgatcgcg gatttatttc gcgctgaagg cgttcgcgtc ttgataaatg
     3061 aaggaacgcg catggacctg cgcggcgaga gtttttggct ggccggcgtc gatgacacga
     3121 tggtcggatt ggaagacctc tcgctggctc tggccggttc aagcgaagac gaattcaagc
     3181 tgctgctcgc gcacaatcca atcattttac gaagagccgc acgcgtttct gtagacctcg
     3241 tgctcagtgg tcatacacac ggcggccaag tcacctggcg atcggaaaaa agccgttcag
     3301 gtcgcccgcg acggaggatg ctgcgggggc tgggtcgtcg cggcaacacg caaatttacg
     3361 tgacccgcgg cctgggaacc gtcgtgctgc cgattcgcta cggttgcccg cctgaggttt
     3421 ccgtgctcga gttacgcagc gcaagttagt tcaggttccg gaatacgatt gatgctacga
     3481 ccaccgccag tccgcaattt gaaattcgca atccgaaatc tgaaatttga agtttgaaat
     3541 ttcactgtgt cctcacgcat cgtcaccgta ccgaatttgc tgaccgtgtt ccggatggcc
     3601 ttgactccgg tcttcgtatc gctgctcttc tatcaaaagt tcctgctggc cttgggtgcc
     3661 ttcgtcctcg cgggcataac tgacggcctg gatggctt
//
LOCUS       DATDBY010000376         3432 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1497210, whole genome shotgun sequence.
ACCESSION   DATDBY010000376 DATDBY010000000
VERSION     DATDBY010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3432
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1497210"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1381)
                     /locus_tag="VIT19_06920"
     CDS             complement(<1..1381)
                     /locus_tag="VIT19_06920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838750.1"
                     /translation="MKISRGLLSFLTLPTIVVALCVGALAQSDVRRTTTAITYPLDQT
                     IEVPFRGTTRLPRLKGDAKVRRQGRRGTRVQLSLDHLPRGYELGGAYTTFVLWAISPD
                     GTVDNLGEIKRSGSGIIDSKIDVTTPLQTFALIVTAEPHFLVRAPSRMVVLENFRPAM
                     PRDAQIDTVPVTYIGNSSDYFRDASVPTIAQSDFRDIPNALLGARQALNLARYAGAER
                     DAPNELRAAVADLEQAEAALRMRQAESEVDVLARQATSSAAKAEAMALARRAARERRE
                     EIERRDQAVRSAEETAATANQEITRLQKDLGNERHARELAERDSLRSQEQLRDARTEI
                     ARLREEIQNVRAESEDAKVRLARIEGERQAEQARQNAETRAAQQRATSANLKQALARF
                     GTVRESERGIVLVLNESWWVNPRSGNLTAAAAARLDQLGALIANNPDYQISIESYTDN
                     AGRADALQQM"
     gene            complement(1625..1798)
                     /locus_tag="VIT19_06925"
     CDS             complement(1625..1798)
                     /locus_tag="VIT19_06925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838751.1"
                     /translation="MLYYIGSFFLIIWLVLKFGMHKGGFVHTLLLTGIGFIVAQFVQH
                     MRTRQYEREQRDS"
     gene            complement(1850..3256)
                     /locus_tag="VIT19_06930"
     CDS             complement(1850..3256)
                     /locus_tag="VIT19_06930"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5838752.1"
                     /translation="MVQDNPPPTAVTLRWGARPGVSRYRLQLANDATFIDVVFDRIVS
                     GHEYRLNDLPPGRYYWRVASLNAKRGEFSSAGVIEVRANGDTKTPSPTPPAVSNKAKS
                     TVTSRGGWYAAIGDVTSSIVAHLRDSGSTEIVAVTTDGRIFALDATRGVALWTARTAQ
                     RPPSALSPQVISIRAPGGDNILVLAGKLAILIEGRTGRELWRTTLPGNAVAALASGTS
                     AFVVDSSLRKLFVIDPNLGRVISEAALPRRAVGNPATISYRGARAVAVALDDGALHVF
                     DESGRLMIAANAGSPTTTGPLMIRTARGELVLVGTRNGLTALAAEDLRPLGRVTLKDD
                     SPRGSLSAQDLDSDGRSEAVMFTERGRVVIVKADEGRIVWEADAGRAESAAFADVNGD
                     RVLDMLLAGRDGFAFALSGRDGSVVWKDERVSSVTANHAPGAAPRGTLAVPFVSGVLI
                     IAADPNRTGLRAIEFPKR"
     gene            complement(3243..>3432)
                     /locus_tag="VIT19_06935"
     CDS             complement(3243..>3432)
                     /locus_tag="VIT19_06935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838753.1"
                     /translation="AVNPDGPGSDSAGREATAIRRLLINGEVLFSQKSPAQMGLRGRD
                     LHRSRVNVLSSCLGGGSG"
BASE COUNT          687 a         1058 c          994 g          693 t
ORIGIN      
        1 tcatttgttg cagcgcatca gcacgacccg cattgtccgt gtacgattcg atcgatattt
       61 ggtagtccgg attattcgcg atcaacgcgc caagttgatc caggcgcgcg gcggccgcag
      121 ccgttaagtt tccggaacgc ggatttaccc accaggactc gttcagcacc agcacgatgc
      181 cccgttcgga ctcgcgcacc gttccgaagc gcgccagcgc ctgttttaaa ttcgcagagg
      241 tggcgcgttg ttgcgccgcg cgcgtttcgg cgttttgccg cgcctgttcg gcctgacgct
      301 cgccttcgat ccgtgccagc ctaacttttg catcctccga ctcagccctc acgttctgaa
      361 tctcttcacg cagccgggcg atttcggtgc gcgcgtcgcg aagttgttcc tgcgacctca
      421 gcgaatcgcg ttcggcaagc tcgcgtgcgt ggcgttcatt gccgaggtcc ttttgcaatc
      481 gcgtaatttc ctgattggca gtcgcggccg tttcttcggc gctccgcacg gcctgatcgc
      541 gacgctcgat ctcttcgcgt cgctctcgag ctgcgcgccg cgccagcgcc atcgcttccg
      601 cttttgccgc gctactggtt gcctgtcgcg caagaacatc cacttccgat tcagcctggc
      661 gcatgcgcag cgcggcttca gcctgttcga gatcggcgac ggccgcgcgc aactcgttcg
      721 gagcatcacg ttccgcgccc gcgtaccgcg cgaggttcag ggcttgccgc gcgcccagca
      781 gggcattagg aatgtctcga aaatcggact gagcgatggt gggaacgctt gcgtcgcgaa
      841 aatagtcgct ggagttaccg atgtaggtga ccggcacggt atcaatctgc gcgtcgcgcg
      901 gcatcgccgg gcggaagttc tccagcacaa ccatgcggct cggagcgcgc acgaggaaat
      961 gaggttcggc cgtcacgatc aatgcgaacg tttgcaacgg cgttgtcaca tcgatctttg
     1021 aatcgataat cccgctgccg ctgcgcttta tttcgccgag gttatcgacc gttccgtcag
     1081 gcgagatggc ccacaacacg aacgtcgtgt acgccccgcc taactcatag ccgcgcggta
     1141 aatgatcgag gcttaactgg acgcgggtgc cgcggcgtcc ctggcgtcga acttttgcat
     1201 cgcccttcaa gcgcggcaaa cgcgtcgtcc cgcgaaacgg cacctcgatc gtttgatcca
     1261 gtggataggt aatcgcggtc gtcgttcgcc gcacgtcact ctgggcaaga gcgccgacac
     1321 agagagcaac aacaattgtc ggaagagtaa ggaacgacag taacccgcga gatattttca
     1381 tcaaaccctc taattgaaga acaggctacc tgcctgttca gtttatgtcg agcagagcag
     1441 gctgattcct gtcctatgtc gtagatgcac ggcccgaggt taattgttgc cgaaccggga
     1501 gaaactgaca agaaggtttc ttctgggaac tgccgcactc cctctccctc tggcagaggg
     1561 ctggaatgag ggtgggaagc ttagggcgtt aagaactgac caccttttgg gggagacgga
     1621 aagattaaga atcgcgttgt tcgcgctcgt actgccgtgt tctcatgtgc tgcacgaatt
     1681 gggccacgat gaaaccaata ccggtcaaca aaagtgtgtg gacaaatcct cccttgtgca
     1741 tcccgaactt caggacaagc cagatgataa gaaagaatga tccgatgtaa tagagcattt
     1801 agagcctggg gcccgtcagc cgggcaagag gcgcattgta attggagagc tagcgtttag
     1861 gaaattcgat cgcgcggaga cctgtgcgat tcggatcggc ggcgataatc aaaacgccgg
     1921 aaacgaacgg cacggcaagt gtaccgcgcg gagccgcgcc gggggcatga ttcgcggtga
     1981 cactcgagac tctttcgtct ttccagacaa cggagccatc gcggccggac agagcgaacg
     2041 caaatccatc cctgcccgcc agcaacatgt cgagcactcg atcgccgttc acgtccgcga
     2101 aggcggctga ttcggcgcga ccggcgtcag cttcccaaac gattctgcct tcgtcggcct
     2161 tgacgatgac aacgcgaccg cgttccgtaa acatcactgc ttccgatcgt ccatcgctgt
     2221 ccaggtcctg cgcgctcaaa cttccgcgcg gcgagtcgtc tttaagagtt acgcggccga
     2281 gcggacggag atcctcggcg gcgagtgcgg tcaatccgtt tcgcgttccg accagcacga
     2341 gttccccgcg tgctgtgcgt atcatcaatg gcccggtcgt tgtggggctc cccgcgttag
     2401 cggcaatcat taatctgcct gactcgtcaa agacgtgcag ggccccatcg tcaagagcga
     2461 cggcgacagc gcgcgcgccg cggtaactaa tggtcgcagg gttcccaacc gcacggcgcg
     2521 gcaaagccgc ttctgagatc actcttccaa ggttggggtc gatcacaaac aactttcgga
     2581 gcgagctgtc gacgacaaac gcactcgttc ccgacgccaa tgccgcgacc gcgtttcccg
     2641 gcaacgtcgt tcgccaaagc tcacgacccg ttctgccttc gatcaatatc gcgagtttcc
     2701 cggccaagac cagaatgttg tcacccccgg gtgcgcggat tgatatcacc tgcgggctca
     2761 gtgcggatgg cggtctctgt gcggtacggg ccgtccaaag cgcgacacca cgtgtcgcat
     2821 ccaacgcgaa aatgcgacca tcagtcgtca ccgccacaat ctcggtacta cccgaatctc
     2881 tgaggtgggc cacgatagaa ctggtgacat cgccgatcgc cgcgtaccag ccgcccctcg
     2941 aagtcaccgt ggactttgct ttatttgata cagcaggcgg tgtcgggctg ggcgtcttcg
     3001 tatcgccgtt tgcacgcact tcaataacac cggccgacga aaactcaccg cgtttcgcgt
     3061 tcagcgacgc gacgcgccag tagtacctgc caggcggcaa atcattcagg cggtattcgt
     3121 ggcccgagac gattcggtcg aatacgacgt cgatgaaggt ggcgtcattt gccagttgca
     3181 gacggtaccg ggacacgccc gggcgagcgc cccaacgaag cgtcaccgcg gtcggcggcg
     3241 gattatcctg aaccaccgcc caggcaggag ctaagcacgt taacgcggga ccgatgcaaa
     3301 tcgcggccac gcaaccccat ctgagcaggc gacttttggc tgaacagaac ctcaccatta
     3361 attagtaaac gacgaatcgc ggtagcttcc ctcccggccg agtcagaacc ggggccgtcc
     3421 gggttcaccg cg
//
LOCUS       DATDBY010000377         3855 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2539892, whole genome shotgun sequence.
ACCESSION   DATDBY010000377 DATDBY010000000
VERSION     DATDBY010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3855
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2539892"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..843
                     /locus_tag="VIT19_06940"
     CDS             <1..843
                     /locus_tag="VIT19_06940"
                     /inference="COORDINATES: protein motif:HMM:NF020130.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HEY5838754.1"
                     /translation="PDQMLPCLASEVMGRTHGLLPRSLATVSMQSQGCSVMLKSVEVA
                     QWYLAANPGKMAIVLMSEAHTPYVAPLLRDEYFGFRDVARMRKNGKLTDAQFEHERIE
                     TTLAIQSMLFGDGAVALLLGTDQAGKPAFGPIAHLTNDIPDDVNLLSMTAHSLHPTLN
                     GKPQYFMRPAVPTRGAHYAVATVNDVLDNPLSVVNNMSEVDDCMIHTGSKKILDGVCS
                     QLNIDTESTRVNKSYDVLENFGNLSSASTGFMLASKQEWAGPAIVVGFGVGFTASAGL
                     MSVN"
     gene            914..1093
                     /locus_tag="VIT19_06945"
     CDS             914..1093
                     /locus_tag="VIT19_06945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838755.1"
                     /translation="MTNAPTISTRNLARGIARITRVSDHAPMVITRLSGWINVGESKA
                     VAAAWIIPTRLLARR"
     gene            1166..1480
                     /locus_tag="VIT19_06950"
     CDS             1166..1480
                     /locus_tag="VIT19_06950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838756.1"
                     /translation="MEFESVGEIIASRMLYLIDEQGNKRPVSVFVGKPQPSQSDPGYE
                     CPFQIIGLGSQNTHVGHGRDSIQALKTALILLGAKLNHLNEEVGGRLVWEDGVPGELG
                     FP"
     gene            1542..2543
                     /gene="moaA"
                     /locus_tag="VIT19_06955"
     CDS             1542..2543
                     /gene="moaA"
                     /locus_tag="VIT19_06955"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: protein motif:HMM:TIGR02666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEY5838757.1"
                     /translation="MTSILKDSYNRAIRDLRVSLTDRCNFRCFYCLPHGEPPIAPKEQ
                     MLSYEEIEYACDIFVELGIEKIRLTGGEPMMRRDIEQIIFKLAQLKERGLLDLALTTN
                     GYFLPHRAQSLKEAGLDRITISLDSLKPDTFKQMTGVDVLERVLEGLQAAKDAGLDPI
                     KINAVIVRGHNEDEVADFAAFAREHDVKMRFIEFMPLDSGHDWAREDVFSGREIRKRI
                     QETFPLEPVGELRGSNTASRYRFADGAPGEIGIIAPVTEPFCGACSRIRLTADGQIRT
                     CLFSTVEHSLRDVIRDGASRQETIDFIESVVMKKEPRHFINDPEFVTPSRSMSFIGG"
     gene            2677..>3855
                     /locus_tag="VIT19_06960"
     CDS             2677..>3855
                     /locus_tag="VIT19_06960"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEY5838758.1"
                     /translation="MRRLILRLSLTFLLLSILFGVAVGQECNPPPITGPAKSANIFSP
                     EQEMVLGELTYQNLAREMRFVRDPQLVAHLNAIGAKLIKHLPPTGLKFQFFIVDIPDA
                     NAFNVAGGYVFVSRKLIALTTNEDELAGVIGHELGHAVARHGATDFSVLLKKILNVTA
                     VGDRKDIADKYNLLIERWRTKRINVGSEEDSEQAEADRIAVFAIVAAGYDPEAVAAFF
                     ARLVEATPGSGGWFSDIFSRAKPEEKRLRDIIKTTQRLPAACRDIPKATASHNFLTWQ
                     ADVVSFRYADLKEQLPGLLWKKELSPKLRSDVSHFAFSNDGRFILAQDDFAVTIIQRE
                     PLAVLFQIPVDGAHPASFTPDNEFVVFGTRNLRFEKWSIADRKPVQMRELVLRDECWE
                     H"
BASE COUNT          850 a         1073 c         1084 g          848 t
ORIGIN      
        1 cctgaccaga tgctgccgtg cctcgcttct gaagtgatgg gccgcacgca cggtttgctg
       61 ccgcgctcgc tggcgacggt cagtatgcaa tcgcaagggt gctcagtgat gttgaagtcg
      121 gtggaagtcg cgcaatggta cctcgcagca aatcccggaa agatggcgat cgtgctgatg
      181 tccgaagcgc acacgccgta tgtcgcgccg cttcttcgcg acgaatattt cggcttccgc
      241 gacgttgcgc gcatgcgcaa gaacggcaaa ttgacggacg ctcaatttga acatgaacgc
      301 attgagacaa cgttggcgat tcagtcgatg ttgttcggtg atggcgccgt ggcgctgcta
      361 ctcggcacgg atcaagccgg caagccggct ttcggtccaa tcgcccacct gacaaacgat
      421 attccggacg atgtgaatct gctgtcgatg acggcgcaca gcttgcaccc gacgctgaac
      481 ggcaagccgc agtatttcat gcgaccggcg gtcccgacac gcggcgcgca ctacgccgtc
      541 gccaccgtca acgacgtcct ggacaacccc ctgtcggtgg tgaacaacat gagcgaagtc
      601 gacgattgca tgattcacac gggtagcaaa aagattctcg atggggtctg ctctcaactc
      661 aacatcgaca cggaatcgac gagagtgaac aagtcttatg acgtgcttga gaatttcgga
      721 aatctttcca gcgcttcaac cggctttatg ttggcgagca agcaggaatg ggctggcccg
      781 gcgatagtcg tcggcttcgg cgtcggcttc accgcgagcg caggtttgat gagcgttaac
      841 tagtccgcgc acgcatcctg cgtgcggtac gcaggcatct tgcctgccga atcactgaag
      901 aggatccgga gccatgacaa acgcacccac aatttccacc cgcaacctgg cgcgaggcat
      961 cgcgcgaata accagggttt ccgatcatgc gccaatggtg atcacccgcc tgtcgggctg
     1021 gatcaacgtc ggtgagagca aggcggttgc agccgcatgg ataattccga cgcgcttgct
     1081 tgcacgccga taacacattg ttgtctcccc cagcgccggt ctgcaaccgg ccgaagttta
     1141 gttttcgcga gcacccgagg acctcatgga gtttgaaagt gtcggggaga tcattgcctc
     1201 ccgcatgctt tacctgatcg acgagcaggg aaataaacgt cctgtaagtg tctttgtcgg
     1261 caaacctcaa cccagccaaa gcgaccccgg ctatgagtgt ccgtttcaaa tcattgggct
     1321 tggcagccag aatacgcacg tgggccacgg ccgcgattcg atccaggcgc tgaagaccgc
     1381 gctgattctc ctcggcgcga agctaaatca tctaaacgag gaggtcggcg gccgactggt
     1441 ctgggaagac ggcgtgccgg gcgagctcgg atttccctag attcgtgcca taaccccgtc
     1501 gtgtttggtt cacgatcgct gctggcttat gattgctgcg catgacctca atcctcaagg
     1561 attcatacaa ccgcgctatc cgcgacctgc gcgtgtcgct caccgaccgc tgtaattttc
     1621 gttgcttcta ctgcttgccg cacggtgaac cgccgattgc gccgaaagag cagatgctct
     1681 cgtacgaaga gatcgaatac gcctgcgaca tattcgttga gttaggaatc gagaagattc
     1741 gtttgacggg cggcgagccg atgatgcgcc gcgacattga gcagatcatt ttcaaactag
     1801 cgcagttgaa ggaacgcggc ctgctcgatc tggcgctcac gactaacggg tatttcctgc
     1861 cgcaccgcgc gcagagtctg aaagaagccg gtctcgatcg catcacgatc agcctcgaca
     1921 gtctgaagcc cgacactttc aaacagatga caggtgtcga tgttttggag cgagtgctgg
     1981 aaggacttca agccgcgaaa gatgcgggcc tcgacccgat caaaatcaac gccgtcatcg
     2041 tgcgcggtca caacgaagat gaagtggcgg actttgccgc gttcgcgcgc gagcatgacg
     2101 tgaagatgcg cttcatcgaa ttcatgccac tcgattccgg tcacgactgg gcgcgggaag
     2161 atgttttctc gggaagagag attcggaaac gcatccaaga aacatttccg ctggaacctg
     2221 tcggcgagct gcgcggctcg aacactgcgt cacgttatcg cttcgccgat ggcgcgccgg
     2281 gagagatcgg gatcatcgcg ccggtcaccg aacctttctg cggcgcgtgt tcacgcattc
     2341 ggctgaccgc tgacggtcaa atccgcacct gcctgttttc aaccgtcgaa cattcattac
     2401 gggatgtgat tcgcgacggc gcatcgcgtc aggaaacgat cgacttcatt gaatctgtcg
     2461 tgatgaagaa agagccgcgt cacttcatca acgatccgga gttcgtcaca ccttcaaggt
     2521 cgatgagttt catcggcggg tagcctaaca aaagttgggt gctggccccc cttcccggac
     2581 ctccaaattg cgcttgaatc tttcggttga ccttcgagtt aatcgaaata taatgccttc
     2641 acttgcaagg tctcctgacc cgcggaggta acacccatgc gcagattgat actccgtctc
     2701 tctctgacat tcctgttgct ctcaatcctc ttcggagtcg cggtgggaca ggagtgtaat
     2761 ccgccgccga taacgggacc ggcaaagtcc gcaaacatct tttctccgga acaagagatg
     2821 gttctgggcg agctcacgta tcaaaacctc gcgcgtgaga tgagattcgt cagagaccct
     2881 caactcgttg ctcacctcaa tgccattggg gcaaaactaa ttaagcatct gcctccgacg
     2941 ggtctgaagt tccagttctt tattgtggac atccctgatg caaatgcttt taacgtggcc
     3001 ggcggttatg tgttcgtttc gcgaaagctc atcgcgctga cgaccaacga agacgagctg
     3061 gcgggtgtca tcgggcatga attgggtcac gcagttgctc gtcatggcgc cactgatttt
     3121 tccgtcttgc ttaagaagat tttgaatgtc actgcagtcg gcgatcgcaa ggacatcgca
     3181 gacaaataca acctcttaat cgaaagatgg agaaccaaac gcatcaacgt cggctctgag
     3241 gaagactctg agcaagccga ggcggatcga atcgccgtgt tcgccattgt cgcggctggc
     3301 tacgatccgg aggcggtcgc cgcgttcttt gccagactgg ttgaagcgac gcccggatcc
     3361 ggcggttggt tctctgatat ttttagccgc gccaaacctg aggaaaaacg gctacgcgat
     3421 atcatcaaga caactcagcg cctgccagct gcgtgccggg acattcccaa ggcgacggcg
     3481 tcgcacaatt ttttgacctg gcaggccgat gtagtttcgt ttcgttacgc agacctgaaa
     3541 gaacaactcc cgggacttct ttggaagaaa gaattatcgc caaaactgcg gagtgacgta
     3601 tcgcattttg ctttcagcaa tgacggcaga ttcatcctgg cccaggacga tttcgcagtc
     3661 acaatcattc agcgtgaacc gctggcggtg ttgtttcaga tcccagtgga tggtgcgcat
     3721 ccggcttcat ttacgccaga caatgagttc gtggttttcg ggacacgcaa tctgcgtttt
     3781 gaaaagtgga gcatcgccga tcggaagcca gtgcagatgc gcgagttggt tcttcgcgat
     3841 gagtgttggg aacac
//
LOCUS       DATDBY010000378        14014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1660591, whole genome shotgun sequence.
ACCESSION   DATDBY010000378 DATDBY010000000
VERSION     DATDBY010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 14014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14014
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1660591"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2858)
                     /locus_tag="VIT19_06965"
     CDS             complement(<1..2858)
                     /locus_tag="VIT19_06965"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838759.1"
                     /translation="MKFSRAKIKLIAAVIALVFGVASSSWARVIDSSSPGGSVITNQA
                     RATYSDDTGEAFETVSETVTLTVVAVASITVTPDETTPSDTVGPREQVTRAFRVCNTG
                     NTTDQVTLTQNSITPPAVITALYFDNDGSSTVTAGDELITLNQTVSPQLAPNGCISVL
                     AVIDTNDVAAQSTLSISITARSTASGAVNGRNEDAGTIINAVGSGARLTDPVNPSLAP
                     SKLVNGSTQAVVSMGGQFIYTIAFRNSGETPARNVVMSDQLPTTIQYVPSSLRLNDNL
                     VSDAIDADEGSVVNNTVQMRLPRVNPGEAFRITFSARLANAVTAGVGVVNNATFTADN
                     ASPVQTTDAVVVADPFGLVFAARGGSSAPIAGARVELFANADGTNLVTLPPNSGFVPN
                     AANANPFATDSAGHFSFKLSSESIAGETNYFMKISAPGFRTRMIQLTSRPTHNGLFAL
                     TQHAVDGQELADSAFVLARNDINVEDLAALVMNIPMFEARGLQVIKSADRARVEIGDI
                     VTYRVEVHNPTATTLGNVTVEDRLPESFHYAEGSALLSTGASPPQAIAPQVNGSTLLF
                     TIDSLPAGSTAKLLYRVRIGANAGEGDRENVAVASGSFPSGERTTSPQARATVFVAAG
                     VFSARQVLLGRVFVDTNQNGQFDDGDRPSPGVRLYLNNGQSVITDSEGLYNFPALNDG
                     SIVISLDPVSLPSHYALSDGGRYSGKSWTRLLRTPIGGGGLLRQNFALINTGAPKSEP
                     PAVTGGSARVSEPGAVATVSVPGAVAMGSNGTGKDAGAPQAGMSSTPRGLPARGPRPA
                     LQTPGTYEFASTEDLEPVPAGTVRVVSPKPDSVVMAPALEVEAEVEINSTVKVEINGE
                     EVSDKNIGKRRVDHKNKIAGFTFVGLNVRPGPNKLQVTAIAANGSAGQPQEIVVMGRG
                     PARRLEITTEKTEIQAGGSDSTIVRVSAFDQWGNPALDG"
     gene            complement(2959..5004)
                     /locus_tag="VIT19_06970"
     CDS             complement(2959..5004)
                     /locus_tag="VIT19_06970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838760.1"
                     /translation="MTNPLKNYTGANTLRLLVAALIVLAFFGRAAAQTPGGTVISNQA
                     SASYTDGTNTYETVSNTVTVTVSNVSGITITPDAGSNPTVVAGQTAVLNDFTVSNTGN
                     FTDQVRFLASGASVRVVGPGTITRAVIDLDNSGTINGGDTDIFTNGADVLSANIAQNG
                     SIHVLVEVSVNAGATAGQTVQVLLGDASTGGPSFDNQAANSSANEVRTVSATSVNGLR
                     EGRGDISVTVANDALLQLTLTAPSGPVALGSDITYGWQVCNNGARDASGVTLNASTQV
                     YIIAPVPARTVLTSGQTFPAGTLYTTSALTTAPLSATWSSSAPVPLSNTTRLAFPVGA
                     TLASGGACSASINMIVTINTGIDASVPIDEIGDAFGRNTVNATITDQSGDATPNNGDG
                     NANFNEGYIAGAGHGVIQQTTLTQIGSVLIGPSGAAGAVGPTDNNDDYTNKSANTGIA
                     GVAPGGVTTALGQLVYVNTVQNTGNTADTFTLDAPTVPAGFTVEISTTGIGGPYTTVS
                     GGGSVSLAIAFGASANIHVRITEPAGNTVLTGFDTVIRATSTATPAANNRTIDRLYTG
                     FVRLVKSYTVSNSTGVGGATDAVPGAVITYNITYENISTSNGDASCVKLTAQNLVITE
                     DGLAAPNNWGTFTTHTGTPGDTGSGVVVIVNATTYTDTVASLAPGVSAVFSFQRSIN"
     gene            complement(5052..5570)
                     /locus_tag="VIT19_06975"
     CDS             complement(5052..5570)
                     /locus_tag="VIT19_06975"
                     /inference="COORDINATES: protein motif:HMM:TIGR01451.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838761.1"
                     /translation="MFKSKNKIAVLTLATLSLLAVTAVGFAQRHHLIAAMARPDVKVQ
                     LSAAVERDSELVPLEKASVVKPGEVLDWTIVSENNGNAAAHDYKAVARIPRGTEFIAG
                     SAKGDGAKAVYSIDNGKSFSDKPTVEEKQADGTVKRVAAPVAMYTDIRYEWSDPLAQG
                     GKLSASYKLRVK"
     gene            complement(5935..7314)
                     /locus_tag="VIT19_06980"
     CDS             complement(5935..7314)
                     /locus_tag="VIT19_06980"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY5838762.1"
                     /translation="MSRKINILVVDDDNLLRKLVTGQLSQAGFGAAPASSGSEALAAL
                     RDSDFDVVLLDVMMPDLSGLDALKEIRQLDDPPEVIMLTADTSLQTGLEAMRHGAYDY
                     LTKPATLDEMEAVIRKADEKRRLVKQNASLRSAVRPNNADDAVRIVQENSLMAAVVAQ
                     AENAARTDSTILLTGESGTGKDVLARFIHLKSMRANMPMITVNCGALPETLFESEFFG
                     HERGAFTGATSLRRGLVEAADASTLFLDEIGDLPRGMQVKFLHFLEQGRFRRVGSTRD
                     QTSDVRVIAATNRNLTVAVERKEFRADLFYRLNVVALHVPPLRERREDIAKLIEHFLG
                     VYRERFNRPKLNLTDEATQRLLEYSWPGNVRELKNYLERAAAISPTDAIEADQIPELS
                     PDAEIEAATPEPVPRRLEELEREHILHVLRQSEGNRERAAAILGISSRTLYRKLREYE
                     HERGIDSED"
     gene            complement(7374..8945)
                     /locus_tag="VIT19_06985"
     CDS             complement(7374..8945)
                     /locus_tag="VIT19_06985"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5838763.1"
                     /translation="MAVAIDVTHRETSQPESATTLGTIVDLVRRITHADTTSVVSFSQ
                     IDNTITWEAASGFTTPAAERPNTQQLNNVLADRVLAADSVVIVQGIGRRDGYPADEFP
                     IHALEGVCDLAMMPLRSRGVTLGALIAGYRSAHEFTVEEKESLRGLADMASLALDNAR
                     LVETLATAEKIWEQTFEAIGEGILAYDEHGRILRCNARAAEMLELKTEEVTDLTFAEA
                     FAHMFGEPAAAYHLAESRDLSSAFEVQTETGRRYLTSIASIRGPLENTINVATWRDVT
                     QLSEVQEQLSRSRRLGSVGQLAAGVAHEINNPLAAISTCAEAVIRDLRKSDETQKLAS
                     EHQWNYYLEEIVRQAQRCKEITRGLLDLTQQRQAKRSMSNLNAIVRDCLKVAVQRPES
                     ARIEFKVALDENLGEVATDPALVRQILDNLLSNAADAAGENDGSVTVTTARETDRALI
                     EVADDGPGIPADLLPRIFDPFVSTKRAGKGYGLGLAICAALAEALGASLTVESKEGEG
                     SRLRLWIPRRAPEGA"
     gene            9089..9196
                     /locus_tag="VIT19_06990"
                     /pseudo
     CDS             9089..9196
                     /locus_tag="VIT19_06990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612183.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
     gene            complement(9317..9829)
                     /locus_tag="VIT19_06995"
     CDS             complement(9317..9829)
                     /locus_tag="VIT19_06995"
                     /inference="COORDINATES: protein motif:HMM:NF026927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Imm21 family immunity protein"
                     /protein_id="HEY5838764.1"
                     /translation="MTLTWISSDGGPLLLVEKSLVSDWQGVSTLQTNGAEDGPPADYD
                     RACSIEDYVGLIAVGTGEALVLGDEPMQTSWLAVSDREGILIRWQWAADEESVRNTLH
                     EIIEAAWESTDVRFEIKTGELLLFDAAYPGDEIESSLVINLSAGEYSVNTAFWRPEDE
                     TSLILHRLRR"
     gene            complement(9875..10102)
                     /locus_tag="VIT19_07000"
     CDS             complement(9875..10102)
                     /locus_tag="VIT19_07000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838765.1"
                     /translation="MSNEITWGDAVIVRKNAPDEYRPGVRGSVCGVPDVLDGPNRTEA
                     ERPILARLYLVEFSDGEAVEIPEEYLLKEIE"
     gene            complement(10169..10465)
                     /locus_tag="VIT19_07005"
     CDS             complement(10169..10465)
                     /locus_tag="VIT19_07005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838766.1"
                     /translation="MEVLIRYHYSDDVHDAVVRRVHQEDERLEVEIETAEGQSVTFRF
                     TGVQSVDANQAEGMLLYSLSEMESALPHRKFVFANSNDDDSARLEIVAREVHRS"
     gene            complement(10453..10908)
                     /locus_tag="VIT19_07010"
     CDS             complement(10453..10908)
                     /locus_tag="VIT19_07010"
                     /inference="COORDINATES: protein motif:HMM:NF023580.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3592 domain-containing protein"
                     /protein_id="HEY5838767.1"
                     /translation="MAVVDASHKLLSVLRGKRLIVAWLLSTVVVGVAAGSFFELPKFY
                     RLSRYGLATTGVVADLQPLNHRSVNYRYTANARTHRGGGHAGDIDRNFEEVRLDEGVL
                     IFYDPENPGVSCMGQPSRHLRKMLLLTAIVTSTPSFFFLALAFKRNWKS"
     gene            complement(10895..13111)
                     /locus_tag="VIT19_07015"
     CDS             complement(10895..13111)
                     /locus_tag="VIT19_07015"
                     /inference="COORDINATES: protein motif:HMM:TIGR03696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
                     /protein_id="HEY5838768.1"
                     /translation="MDALGYQTDFTYNLAGQTDTTTYPATGQTGTGRSRTTNGYLYVG
                     GPLTTATAFDESNVQVRQVTRTYGVEGEALSVSGSTEPVTNTYDALYRVKTLTDGNNN
                     TTTYSYNNIGLVSSILLPGGDTTQFPSYDNDGNLLQRIDGNSVVTNYLYTDSESRLTD
                     IQYPASSSLNVHFGYDSYGRRSSMTDASGSRSYSYGNLDELSSTTTTYTGLAGKTISY
                     VYYPDGSRQTMTTPAGTFSYYYDAARRPSSITNPFSETTNWTYQNNDWLSTQTLANGA
                     TATYTHNAVGQVTRLLNQIGSNTISDFSSLVYDGVGNRTSVTASIPGATSLNGTTGYT
                     YDTKDQVTQETSTRNGGFTDNFGYDSAGNPTTFKGATKNYNSKNQQTGTGFSYDGNGN
                     PTTYNTLSLTFDPENGVTAFVSIVTASYKGNGLRAWKQNATGRTYFLYDGINPIVELD
                     ASGAVNATSTIGSAGLVSRRTASSIFYSFDAEGNVAQRSDAGGNIVSNYLFAAHGTVL
                     SSGLSDPYGYKGRFGYFTDGETGLQLLGHRYYDPSTGRFLTRDPIGYAGGVNLYSYVR
                     NNPSKWIDPIGHDIFGVSVGGSAYAGYGPMGGGVGAAGSTVYGYNTTDGEVGTASSYG
                     YFYPGSECEGYAIGSSGSVGLSFVYSNANKWDDLGGDFDTHEYSAGPVSVEISYGANG
                     LFQVQVSPGTSLGKGAGYANFKSYTPPGTIGSVQGLGRSLAEEIDRLYGGGYCGCR"
     gene            13328..>14014
                     /locus_tag="VIT19_07020"
     CDS             13328..>14014
                     /locus_tag="VIT19_07020"
                     /inference="COORDINATES: protein motif:HMM:NF036808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838769.1"
                     /translation="MAEVSIISRGAKRIRNGHLWVYRSDVVTPEGVAGGAIVRVVDQA
                     HNFVGQAFYSDASEITLRFLTTREETIDREWWRLHLRACAGRRSRIAADTNAYRLVYS
                     EGDLLPSLIIDKYDDVFVIQTLSQGSEQVKATIAELLVEEFKPDAIVERNDARVRQLE
                     GLELISGIIWSAPAERSGDGALDVQPDVEINQHGVRFLVSPLGSQKTGAFLDQRENYL
                     AAKRVAHGRAL"
BASE COUNT         2848 a         3982 c         4068 g         3116 t
ORIGIN      
        1 ccatccagcg caggattgcc ccactggtca aacgcgctga cgcgcacaat cgtagaatcc
       61 gacccgccgg cttgaatctc agttttctca gtcgtgattt ccagacgacg cgccgggcca
      121 cgacccatca caacgatttc ctgcggctgt ccggcggaac catttgccgc aatcgcagtc
      181 acttgaagct tgttcggtcc gggacgtacg ttgagaccga cgaaagtgaa gcccgcgatc
      241 ttgttcttat gatccacgcg ccgcttgccg atgttcttgt ccgaaacttc ctcgccattg
      301 atctcgactt tcaccgtcga gttaatttcg acttcggctt cgacttccag cgccggcgcc
      361 atgaccacgc tgtccggctt cggcgaaacg acgcggacag taccagccgg aaccggctcc
      421 aggtcttcgg tcgaagcgaa ctcgtaggtg ccgggggttt ggagcgcagg gcggggtccc
      481 cgcgcgggca gcccgcgtgg ggtgctagac atccctgcct gcggtgcgcc ggcatccttg
      541 ccggtcccat tagatcccat cgctaccgct ccgggtactg acacggtcgc taccgctccg
      601 ggttctgaca cgcgcgcgga cccgcccgtt accgcaggcg gttctgactt gggtgcgcca
      661 gtattaatca gcgcaaagtt ctgccgcagc aaaccgccgc cgccaatcgg cgtacgcagc
      721 agtcgtgtcc aactcttgcc cgaatatcga ccaccgtcag agagtgcgta atgcgaaggc
      781 aggctgacgg gatccagtga tatgacgatc gagccgtcgt tcaaggctgg aaaattgtag
      841 aggccttccg agtcagtgat gactgattgc ccattgttca gataaaggcg aacgcccggc
      901 gacggtcgat cgccgtcgtc aaattgtccg ttctggttcg tgtcgacaaa cacgcggcct
      961 aacaacacct ggcgcgcgga aaacacaccc gcggcaacaa agacggtcgc gcgcgcctga
     1021 ggactcgtcg tgcgttcacc cgaggggaac gagcccgacg ccaccgcaac gttctcgcga
     1081 tctccttcgc cggcattcgc gccgatgcgc acgcggtaga gcagcttcgc agtcgaaccg
     1141 gccggcaaac tatcgatcgt gaacaaaagg gtcgagccat tcacctgagg cgcgatcgct
     1201 tgcggtggag acgcgcccgt cgaaagcaac gctgagcctt ccgcgtaatg gaaagactca
     1261 ggcaggcgat cctcaacggt tacattgccg agcgttgttg cggtcgggtt atggacttcg
     1321 actcgataag tcacgatgtc gccgatttcg acgcgcgcgc gatcggctga cttgatcact
     1381 tgcagccctc tggcttcgaa catcggaatg ttcatcacga gcgcggcaag gtcttcgaca
     1441 ttgatatcgt tgcgcgcgag gacaaacgct gaatcagcca gctcctggcc gtcaaccgcg
     1501 tgctgagtca gtgcgaacaa accgttgtgc gtcggccgcg aagtcagttg aatcattcgc
     1561 gtccggaatc cgggcgcgga gatcttcatg aaatagtttg tttcgccggc tatcgattcc
     1621 gatgacaact tgaagctgaa gtgaccggct gagtcggtgg cgaacggatt cgcgttggcg
     1681 gcgttcggca caaagccgct gtttggcggc aaagtcacca aattggtgcc gtctgcgttg
     1741 gcaaacaact cgactcgcgc tcccgcgatc ggcgccgaac tgccgccgcg cgcggcaaac
     1801 accagcccga aaggatctgc gacgacgacg gcatcggttg tctgcacggg cgatgcattg
     1861 tcggccgtga aggtcgcgtt gttcaccacg ccgacgccgg ccgtgactgc gttcgccagt
     1921 cgcgcactga aggtaatgcg aaaggcttcc ccgggattta ctcgcggaag ccgcatctgg
     1981 accgtgttgt tcacgactga tccttcgtca gcgtcgatgg cgtccgaaac cagattgtcg
     2041 ttgagtctca gcgaactcgg aacgtattga attgtcgtgg gcaactggtc gctcattacc
     2101 acgttgcgcg ccggcgtctc gccgctgttg cggaacgcga tcgtgtaaat gaactgacca
     2161 cccatgctca cgacggcctg cgtgctgccg tttacgagtt tgctcggcgc caggctcggg
     2221 ttcaccggat cagtcaggcg ggcgccggaa ccgacggcgt tgatgattgt tcccgcgtcc
     2281 tcgttgcggc cgttgaccgc gccggaagca gtggaccgcg cggtgatgga aattgagagg
     2341 gtgctttgcg ccgcgacgtc attcgtgtcg atgacggcta gcacgctaat gcagccgttg
     2401 ggcgcgagct gtggcgaaac cgtttggttg agcgtaatca gctcgtcacc ggcagtcaca
     2461 gtgctactgc catcgttgtc gaagtacagc gcagtgatta ccgccggtgg agtgatgctg
     2521 ttttgcgtca gcgtcacctg atcggtcgtg ttgccggtgt tgcagacgcg aaaagcacgc
     2581 gtgacttgct cgcgcgggcc gacagtgtcc gacggcgtag tctcgtcagg cgtgaccgta
     2641 atgctcgcga ctgcaacaac cgtcagcgtg acagtctctg aaacggtctc gaatgcttca
     2701 cccgtgtcgt cgctgtaagt cgcgcgcgcc tggttcgtga taaccgagcc gccgggactt
     2761 gagctgtcga taactcgcgc ccacgaactg ctcgcaactc cgaacaccag cgcaattacc
     2821 gcggcgatca gtttgatttt tgctcgtgag aatttcactg gttttaatgg gccagaagcg
     2881 gcccgccggt tcgactacca tttcaggctt cgtaccggcg cgccgcttcg caggggggca
     2941 aggggcgatt gctcgccgtt agttaatgga acgttggaac gagaagacgg ccgacacgcc
     3001 cggggcgaga gaggcaaccg tgtccgtgta agtcgtcgca ttgacgatca caaccacgcc
     3061 tgagcctgta tcgcctggtg tgccggtgtg agtggtgaac gtgccccagt tgtttggagc
     3121 cgccaaaccg tcttctgtga tgaccagatt ctgggccgtc aatttcacgc agctcgcatc
     3181 gccgttcgag gtggagatgt tctcgtaggt gatgttgtac gtgatgactg cgcccggaac
     3241 tgcatcggtc gcgccgccaa cgccagttga gttgctgacg gtgtacgact taaccaaacg
     3301 aacgaagccg gtgtagaggc ggtcgatcgt gcggttgttt gcggccggag tggcagttga
     3361 agtcgcgcga atcactgtgt cgaagccggt gagtactgtg tttccggcgg gctcagtgat
     3421 gcggacgtga atgttggccg aagcgccaaa cgcaatcgcg agcgaaacgg aaccgccgcc
     3481 cgagactgtc gtatagggac cgccgatgcc ggtggtggaa atctcgaccg tgaagccggc
     3541 cggcactgtc ggcgcgtcaa gcgtgaacgt atcagccgtg ttgcccgtgt tctggacggt
     3601 gttcacgtac acgagctgac ccaaagcagt cgtaacgccg cccggagcca cgccggcgat
     3661 accggtgttg gcgctcttgt tcgtgtaatc gtcgttgttg tcagtcgggc cgaccgctcc
     3721 cgcagcaccg ctcggtccaa ttaggactga gccgatttgc gtcagcgtgg tctgctgaat
     3781 gacaccgtgt ccggcgccgg caatataacc ttcgttgaag ttcgcgttgc catcgccgtt
     3841 gttcggcgtg gcgtcacccg actgatcggt gatcgtcgcg ttgacagtgt tcctgccaaa
     3901 ggcgtcgccg atttcatcga tcggcactga cgcgtcgatg ccggtattga tcgtgacgat
     3961 catgttaatg gaagcgctgc acgcgccacc cgaggccagc gttgctccca ccggaaacgc
     4021 cagacgcgtt gtgttcgaca acggcaccgg cgccgatgaa ctccaggtcg ccgacagcgg
     4081 agcagtcgtc agggcgctgg tcgtgtagag cgtgcccgcc gggaaagtct ggccggacgt
     4141 caacactgta cgcgccggaa ccggggcgat gatgtaaacc tgcgttgaag cgttcaaggt
     4201 cacgcccgag gcgtcgcgtg cgccgttgtt gcacacttgc catccgtacg tgatgtccga
     4261 tccaagcgcg accgggccgg agggcgccgt cagcgtcaat tgcagcagcg cgtcgttggc
     4321 gacggtcact gagatgtcgc cgcggccttc gcgcaaaccg ttcaccgagg tggctgagac
     4381 ggtgcgaact tcattggccg aactgttcgc ggcctggttg tcgaatgacg gaccgccggt
     4441 tgacgcgtcg ccgagcagca cttgcacagt ctgccccgcg gtcgcgccgg cgttcacgct
     4501 gacttcaacc aacacgtgaa tcgatccgtt ctgcgcgata ttcgcggaca gtacatcggc
     4561 gccgttcgta aagatgtcgg tgtcgccgcc gttaatcgtg ccgctgttgt ccaggtcgat
     4621 gaccgcgcgc gtaatcgtac ccggcccaac gacgcgaaca ctcgcgccac tcgccaggaa
     4681 ccgaacttga tccgtgaagt tgccggtgtt cgaaaccgtg aagtcattaa gaactgcggt
     4741 ttgaccggcg accaccgtgg gattgctacc cgcgtcaggc gtgatcgtga taccagaaac
     4801 gttcgacaca gttactgtca ccgtgttcga aacggtttcg tacgtgttcg ttccgtcagt
     4861 gtaggacgcg ctggcctggt tcgaaatcac agtgccgccg ggcgtttgcg cggccgcgcg
     4921 accgaagaaa gccaacacga tcagcgctgc aaccagcagc ctaagcgtgt tagcgcccgt
     4981 ataatttttt agtgggttag tcatggtggt cctcattgga ttgggaaagt tggcaggtcg
     5041 tgaggcgcgc attacttgac gcgcagtttg taagaagcag agagcttgcc gccctgggcc
     5101 agcggatcag accattcgta acgaatgtcc gtgtacatcg ccaccggggc agcgacgcgc
     5161 ttcacggttc cgtccgcttg cttctcttcg acggtcggtt tgtcggaaaa cgacttgccg
     5221 ttgtcgatgc tgtaaacggc cttcgcgccg tcgcctttcg cgctgccggc gatgaactcg
     5281 gtgccgcggg gaatgcgcgc tacggctttg tagtcgtgcg ccgccgcgtt tccgttgttc
     5341 tcagacacga tggtccagtc cagaacttca ccgggcttga ccactgaggc tttttccaaa
     5401 ggcacgagtt ccgaatcgcg ctcaacggct gctgacaact gcaccttgac gtcagggcgt
     5461 gccatcgcag caatcagatg gtgtcgctgg gcgaaaccaa ccgcggtgac cgcgagcagc
     5521 gaaagcgttg cgagcgtgag cacggcgatt ttgttttttg acttgaacat gttgtttgtc
     5581 tccttaagat tgtgagggcg ggcaagcgtt ggcattcttt gaacttccca agacactccc
     5641 aaccgtggtt tgcgatttcc ttgttattga acgactaact gtggaagaca atcagccagc
     5701 accgaccatt acaagggccg tgccgcgcgt ggcgaagtgg agcggcgttc tgtcctgatg
     5761 gggtcagaat gccccgattc gcccaatttt ccttgggttt ttcgaggttt tcgcgtaagg
     5821 caagaagcga gtggagacgc cgactttttg tcagcgactg ccattctgtc aggctgctaa
     5881 gcaccaaaga atgttagggg aaagagcttt gggcgggacc ggacttgctg gatcttagtc
     5941 ctcggaatca atgccgcgtt cgtgttcgta ctcgcgaagc ttgcgataaa gcgtccgtga
     6001 cgagatgccc agaatcgccg ccgcacgctc gcgattgccc tcgctttgtc gcagcacatg
     6061 caggatgtgt tcgcgctcga gttcttcaag gcggcgcgga acaggttcag gcgtagcagc
     6121 ctcaatttcg gcgtcgggcg agagctcagg aatttggtca gcctcaatcg cgtcggtggg
     6181 agaaatcgca gccgcacgtt cgagatagtt ttttaactcg cgcacgttac ccggccagga
     6241 atattcgagc agacgctggg tcgcctcgtc cgtcagattc agtttcggcc ggttgaagcg
     6301 ctcacgatag acgcccagaa agtgttcgat cagttttgcg atgtcttcac ggcgttcgcg
     6361 gagcggcggc acgtgaagcg cgacgacatt caggcgatag aacaggtcgg cgcgaaactc
     6421 cttacgttct acggccaccg tcaggtttcg attcgtagcg gcaataacgc gcacatccga
     6481 cgtttgatca cgcgtggatc ccacgcggcg aaatcttccc tgctcgagaa agtgcagaaa
     6541 tttcacctgc atcccccgcg gcaaatcgcc gatttcatcg aggaataaag tcgaagcatc
     6601 cgccgcctcg actaagccac gacgcaagga cgtcgctccg gtaaacgcgc cgcgctcgtg
     6661 gccaaagaac tctgactcga aaagagtttc cggcaacgcg ccgcagttga cggtaatcat
     6721 cggcatgttg gcgcgcatgc tttttaagtg aatgaatcgc gccaggacgt ctttcccggt
     6781 tcccgattcg ccggtcaaaa ggatcgtcga atctgtgcgc gcggcattct cagcctgcgc
     6841 cacgactgct gccatcaacg agttttcctg gacgatccgc accgcatcgt ccgcgttgtt
     6901 cggcctgact gctgaacgga gcgacgcgtt ctgctttacc agccgccgct tctcgtcggc
     6961 cttgcgaatg acggcttcca tctcatcgag cgtcgccggc tttgtaaggt aatcgtatgc
     7021 gccgtgacgc atcgcctcga gtccggtctg caacgaagtg tcggccgtca gcattatgac
     7081 ttcaggtgga tcgtccaact gacggatttc tttcaaggcg tcgaggccgg aaaggtccgg
     7141 catcatcacg tcgagcaaca ccacgtcgaa atcactatcg cgtaatgctg ccagcgcttc
     7201 gctgccgctc gaggcgggcg ccgcgccgaa gccggcctgc gaaagttgac ccgtaaccag
     7261 cttccgcagc aggttgtcgt catcaacgac aaggatgttg atctttcggc tcatgatgct
     7321 tgtggcacag acttcagcct gtgatccgaa cccaaaacgc caccgactaa agtctatgcc
     7381 ccttctgggg cgcggcgcgg aatccacagc cgcaaacggc ttccctcccc ttccttcgat
     7441 tccaccgtca aagaggcgcc gagcgcttcc gccagcgccg cgcaaatcgc taaaccgagt
     7501 ccgtaaccct tgccggcccg cttcgtgctg acaaatggat caaaaattct tggaagcaga
     7561 tccgcgggaa tacctggccc gtcgtcggcc acttcgataa gggcgcggtc ggtctctcgc
     7621 gccgtcgtca ctgtgacact tccgtcgttt tcaccggcag cgtcggccgc gttgctcaga
     7681 aggttatcca ggatctggcg caccagggcc gggtcggtcg cgacctcgcc gaggttttca
     7741 tcaagtgcga ctttgaattc gattcgtgcc gactcaggtc gctgtaccgc gaccttgagg
     7801 caatctctga caatcgcgtt tagattcgac atcgatcgct tcgcctgacg ctgctgcgtc
     7861 aaatccaaga gcccacgcgt gatctctttg cagcgctgtg cctgacgcac aatttcttcg
     7921 aggtagtagt tccattgatg ttcgctggcg agcttttgcg tttcgtcgct cttgcgcaaa
     7981 tcgcgaatca cagcttcggc acaggtagag atcgcggcca gggggttgtt gatttcgtgc
     8041 gcgacgcctg ccgctaattg accaacgctg cccaaacgac gggaacgcga aagctgctcc
     8101 tgcacctcgg acagttgtgt cacgtctctc caggtggcga cgttgatagt gttttccaac
     8161 gggccgcgta tcgacgcgat cgaagtgagg tatcgccgtc ctgtttcggt ttgcacttcg
     8221 aacgccgaag acagatcccg tgactccgcc aaatggtacg cggccgccgg ctcgccaaac
     8281 atgtgtgcga aagcttctgc gaaagtgaga tcggttacct cttcggtttt caattcgagc
     8341 atctcggctg cgcgcgcatt gcagcgcaag atgcgcccgt gttcatcgta ggcgaggatg
     8401 ccttcgccga tcgcttcgaa ggtttgctcc caaatcttct cagcagtcgc gagcgtttct
     8461 accagtcgcg cgttgtccag cgcgaggctg gccatgtccg cgagaccgcg tagcgactct
     8521 ttctcctcaa ccgtaaactc atgcgccgaa cgatagccgg cgatgagcgc gccgagcgtc
     8581 acgccgcgcg atctaagcgg catcatcgcc aaatcgcaga cgccttcgag cgcgtgtatg
     8641 ggaaattcat cagccggata tccgtcgcgc cggccaatcc cctgaacaat tacaactgag
     8701 tcggcggcga ggacgcgatc tgccagaacg ttgttaagtt gctgcgtgtt cggtcgctca
     8761 gcagcgggtg tagtgaagcc ggaggccgct tcccaggtga tcgtgttgtc gatttgcgaa
     8821 aagctaacga cggaagtcgt gtccgcatgc gtgatgcgcc gaaccaggtc gacgatggtg
     8881 cccagcgtgg ttgcgctttc cggttgcgag gtctcgcggt gagttacatc aattgctacg
     8941 gccattaatc ggatcaactg gggacagttc aaatccgcaa atcgtcgagc gttgcccaag
     9001 ctttgtacgc ggaatttgaa tgccggtcaa gtgcggtttc ggcgtgtaaa ctcatccatg
     9061 cgactgcgtt tgccatcgaa tgtagtgcgg taagccggtg cagaatgcga aggtggaaag
     9121 cttccatggc cggctgcggg atgaatgtct gaatgtgaac tggtttgcga acctctggga
     9181 cgcccggcgg aagatctctg cctggtcagc gtagttggta gtgccattca accctgagac
     9241 gctcggaata gtgccggaaa tgcgattgcc tatgccgtcg taatccatgc tgccgaaaag
     9301 tgtgtgaagt tgcagctcaa cggcgcaacc ggtggagaat caacgacgtt tcatcttcgg
     9361 gtcgccaaaa ggcagtattg accgagtatt cgcctgccga aagattgatc actaaactgg
     9421 attcaatttc gtcgcccgga taggcggcat caaacagcag caattcacct gttttgattt
     9481 cgaagcgtac gtcggttgat tcccatgctg cttctataat ctcatggagc gtgttcctga
     9541 ctgattcttc atcggccgcc cattgccacc gaatcaggat cccttctcga tcggagacgg
     9601 ccagccagga tgtttgcatt ggttcgtcgc ccagcaccaa tgcctcaccc gttcccaccg
     9661 caataagacc cacataatct tcgattgagc aagctcggtc gtagtccgcg gggggaccat
     9721 cttctgcccc gttagtttgc agggttgaaa caccctgcca gtctgaaaca agactttttt
     9781 ccaccaagag caacggcccg ccgtcagaac taatccacgt caaggtcacg tcagttgggt
     9841 cgccaagaaa tcgaatctcc gttgagattg gttgttactc gatttccttg agcaaatact
     9901 cttctggaat ttcgacggct tcgccgtcgg aaaactcgac caaatacaac cgcgccaata
     9961 taggcctttc ggcctcggta cgattggggc cgtcaagtac atcaggcaca ccgcaaactg
    10021 atcctcgtac gcccggacgg tattcgtcag gagcattctt cctaactatc accgcgtctc
    10081 cccatgtgat ttcatttgac atgttttagc tcgcaggcaa ccatcgggtg cgatctattc
    10141 gatacaccag gaatatgacc tttctctatt aggaacggtg tacttcccgc gcaacaattt
    10201 cgagccgtgc ggaatcatca tcattggaat ttgcgaacac aaacttacgg tggggaaggg
    10261 cagattccat ctcgctcaag gaatagagca gcatgccttc agcctgattg gcgtcaactg
    10321 attgcacgcc tgtgaaacga aatgtgactg actgaccctc ggcagtttcg atctcaactt
    10381 cgagccgttc gtcctcttga tgtacacgcc ttaccaccgc atcgtggaca tcatcactgt
    10441 agtggtagcg gattaagact tccaatttcg cttgaacgcc agcgccagaa agaaaaagct
    10501 tggcgtgctc gtaacaatag cggttaagag gagcatcttc cggagatgcc tgcttggttg
    10561 tcccatgcag gaaacgccag ggttttcagg gtcgtaaaag attaggactc cttcatcaag
    10621 tcgaacctct tcaaaattcc tgtcaatatc gccggcatga cctccgccgc ggtgggtgcg
    10681 agcatttgcg gtgtaacgat aattaaccga tcgatggttt aaaggctgaa ggtcagccac
    10741 cacgccggtt gtcgctaaac cataccgcga caaccgatag aacttcggca gttcaaagaa
    10801 cgagccggcg gcgactccaa ccacaacggt agagagcaac catgcgacga taagtcgctt
    10861 gcctctcagg acggaaagca gcttgtggct tgcatcaacg acagccacag tatcccccgc
    10921 cgtacaatct gtcgatttcc tcagccaagc ttcggccgag tccttggacg ctgccgatcg
    10981 tccccggagg agtataagac ttaaagttcg cgtaacctgc acctttgcct aagctggttc
    11041 caggtgagac ttggacttga aatagaccgt tggcaccgta gcttatttcc acggaaacgg
    11101 gacccgccga gtattcatga gtatcaaagt cgccgcccag atcgtcccac ttattggcgt
    11161 tcgagtatac aaagctgaga cctacgctcc cactggaacc gattgcataa ccttcacact
    11221 cagagcctgg atagaaatat ccatagctgg atgctgttcc cacctctccg tctgtcgtgt
    11281 tgtacccata aacagtgctg ccagcggctc ctacgcctcc gcccatcggg ccgtatcctg
    11341 cgtaggcaga gcctccaacg gatacaccga aaatgtcatg accgattgga tcgatccact
    11401 tgctggggtt gtttcggacg taggaataaa ggttgactcc gccggcataa ccgattggat
    11461 ctcgggttag gaacctacct gttgagggat cgtagtagcg atgtcccaat agttgaagcc
    11521 ccgtctcacc atctgtgaaa taaccaaacc ggcccttgta accgtatggg tcgctgaggc
    11581 cgctgctaag taccgtcccg tgcgcagcga acaggtagtt cgaaacaata ttgccgccag
    11641 catcacttct ttgagctaca ttgccctccg catcaaagct gtaaaagata ctgctggcag
    11701 tccggcgcga aaccaatccg gcagagccaa tcgtggaagt cgcgttgacg gcgccgcttg
    11761 catcgagttc gacaatcgga ttaattccat cgtagaggaa gtaagttcga ccggtcgcat
    11821 tctgtttcca cgcgcgcaaa ccgttgcctt tgtaactggc agtaacgata gagacaaaag
    11881 cagtcacgcc gttttcagga tcgaaagtta gcgacaacgt gttgtaggtt gtgggattgc
    11941 cgttaccgtc gtaactgaag ccggttccgg tttgttggtt ctttgaattg taattcttcg
    12001 tcgcgccctt gaaagttgtc gggtttccgg cgctgtcgta accgaaattg tccgtgaacc
    12061 caccgttacg tgtggaagtt tcctgggtca cttgatcttt cgtgtcgtag gtatagcccg
    12121 ttgtcccatt caacgaagtc gcgccgggaa tacttgcggt aaccgaagtt cggttgccta
    12181 cgccgtcgta aaccaggctg ctgaaatccg agatcgtgtt gctgccaatc tgattgagca
    12241 gccgcgtgac ctgcccgact gcgttgtggg tgtaagttgc ggttgcgcca ttcgcaagag
    12301 tttgcgtaga gagccagtca ttgttctggt aagtccagtt tgtagtctcg ctgaatggat
    12361 tggtaatgct cgacggacga cgggcggcgt catagtagta actgaaggtt cccgccggcg
    12421 tcgtcatcgt ttggcgactg ccgtcagggt aataaacgta cgagatggtc ttgcccgcaa
    12481 gtcccgtgta ggtggtcgtc gtgctcgaca gctcatccag gttgccgtag ctgtagctgc
    12541 ggctgccgct cgcgtcggtc attgaagaac gccggccata cgagtcatag ccaaagtgga
    12601 cattcagact ggaactggcc ggatactgaa tgtcagtcaa acggctttcg gaatctgtgt
    12661 agagatagtt cgttaccacg ctgttgccgt cgatgcgttg cagcagattg ccgtcgttgt
    12721 cgtatgaggg gaattgggtg gtatcaccac cgggcaagag aatcgatgat accaaaccta
    12781 tgttgttgta ggaataggta gtcgtgttgt tgttgccatc cgtcagagtt ttcacccgat
    12841 atagcgcgtc gtaagtgttc gttaccggct cagtgctgcc ggaaaccgac agagcttcgc
    12901 cttccacgcc atatgtgcgg gtgacctgac ggacttgaac attgctttca tcgaaagctg
    12961 tcgccgtggt caaaggccca ccgacgtaaa ggtagccatt ggtggtgcgg cttcgccccg
    13021 ttccggtttg tcctgtagct ggataggtgg ttgtatccgt ttggccggca aggttgtaag
    13081 tgaaatcagt ttgatagccg agggcgtcca ttacggacgc ggttctgcct tgtgagtcgt
    13141 aacgtaaatg cgttacgtgg ccgagattat ccggccacac gtgcaaatgt ggatcgctta
    13201 aatcaagaag gatctaagaa gtcgtaagat tctgaaccgg cacaacctca cagtctttga
    13261 gtagctgatc tgacgatgtc ctcgcaaagc tctgcgcgta gatgcgcctg tgataacttc
    13321 gatgcgaatg gcggaagtaa gcatcatctc gcgcggagcg aaacgcatcc gcaacggtca
    13381 cttgtgggtc tatcgcagcg acgtggtaac cccggaaggt gttgccggcg gcgccatcgt
    13441 gcgggttgtc gatcaggcac acaactttgt cggccaggct ttctacagcg acgcatccga
    13501 gatcacgctg cggtttttga ccacgcgcga agagacaatc gatcgcgaat ggtggcgtct
    13561 gcatttgcgc gcgtgtgcag ggcgacgttc gcggatcgcg gcggacacga acgcctaccg
    13621 gctggtttac tccgaaggtg atctgttgcc gtctctgatt atcgacaagt acgacgacgt
    13681 cttcgtcatt cagactctgt cccagggcag cgaacaggta aaagcgacaa ttgccgaact
    13741 gctggtcgaa gaatttaagc cggacgcgat tgttgagcgc aatgacgccc gcgtgcggca
    13801 gttggaagga cttgaattaa taagcggcat tatttggagt gcgccggcag agcgaagcgg
    13861 cgacggcgct ttggacgttc agcctgacgt cgaaatcaac caacacggcg tgcgctttct
    13921 tgtttcgccg ctcggctcgc aaaaaaccgg ggcgttcctc gatcagcgcg agaattatct
    13981 ggcggcaaag cgcgtcgcgc acggtcgcgc cctc
//
LOCUS       DATDBY010000379        15666 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1229194, whole genome shotgun sequence.
ACCESSION   DATDBY010000379 DATDBY010000000
VERSION     DATDBY010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 15666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15666
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1229194"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1726
                     /locus_tag="VIT19_07025"
     CDS             <1..1726
                     /locus_tag="VIT19_07025"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEY5838770.1"
                     /translation="RAVDYVFRVTNPAFERHTGWHNVVGVRVRELAPDLEEYWFEKYA
                     QVAATNMPVRFMDRAAALNRWYEVYAFRVGKAGSRTVAVIFSDVSERIRAERTLKESE
                     ARFRNMADTAPVLIWICDADSLCTYVNQRWLEFTGRTLEQELGSGWKQGIHPDDSERC
                     METYASAFPNHEPFRLEYRLRRADGVFRWVFDSGTPRFSQGDFLGYIGSCVDITDRKE
                     SEAALVAAHEQLVIAHTEVSRLKTELEQENIYLREELHSDQTRGEMVGESDAIKYVVF
                     KINQVAVTDSTVLITGETGTGKELVARAIHTASLRNDRPFITVNCAALPANLIESELF
                     GHEKGAFTGATARKLGRFELAHVGTVFLDEIGELPLESQVKLLRVLQEGEIERLGGAK
                     AIKVDVRIIAATNRNLRQAIEKGTFREDLWYRLNVFPITVPPLRQRKQDVPLLVEHFV
                     SHYAKKFGKTITSISPRTMQDLEHYMWPGNIRELANVVERAVIYTQGDVLHVVDLSES
                     AREQTPAAIKSLEQIEREYILYILEQSGWRIEGPHGAAKLLGLNPSTLRTRMIKLDIH
                     KQSLSASD"
     gene            complement(1823..2170)
                     /locus_tag="VIT19_07030"
     CDS             complement(1823..2170)
                     /locus_tag="VIT19_07030"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5838771.1"
                     /translation="MIEKSDVIQEALRVAFAQSEGCHVVGMATELNDALRLLIKEQPD
                     VVLMDVSPAHPSVELLRGIRKIDQGVIIIIFTAENSSEIRIACRQAGATFYLVKWQLR
                     DLLDLLRLVRRLT"
     gene            complement(2345..2974)
                     /locus_tag="VIT19_07035"
     CDS             complement(2345..2974)
                     /locus_tag="VIT19_07035"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5838772.1"
                     /translation="MASVLIIDDHPIVRRGLKEILRGEEDLELTEAGEAAEALQLMKQ
                     NSFALVILDLDLPGTSGLDLLKEIRRTHRKSRVLVLSIYPEDQFAVRVLKAGASGFLS
                     KDAAPEQLSSAIRKILRGSTHISGRTADLLLQSWQDTHESQLHEKLSDREFQILCLMG
                     QGKKTKEIAATLRLSPPTVSTYRARILDKMRLRTTAELIKYAIQNKLAT"
     gene            complement(2949..4580)
                     /locus_tag="VIT19_07040"
     CDS             complement(2949..4580)
                     /locus_tag="VIT19_07040"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY5838773.1"
                     /translation="MSMAERRNSSKRRGNQIGRGRRAPARNGQLSSQETEECFQLAFE
                     NSPFGMAIIDFDFRFRRVNRSLCAALGYDAGELLKRKFIEITHPDDIQWDTELAECLF
                     RGEIPSYHLEKRFVTKQGTVAWLDLTALLVRNKRGKPLYGLAMVEDITDRKHTHDALR
                     LSEERYRSFIANSSEGIWRFEIQNPIDTTLPAKEQLRLLRENAYLAECNDAFARMYSR
                     HRAEDIIGSRFGDLTEISQPPTDVSLTALIENNYRLRNWLTEVVTRDHNRKYLSTSLL
                     GIVVNGMLLRVWSVQTDRSEERRIADGLAESHQRLRALSAHLQSVREKERAELARELH
                     DSLGQSLISIKIELAGLRRTLKSEHSRVSTSVARRFTEINEVLGNTIGAVKAIATELR
                     PGVLDQFGLPAAIEWQCQQFSRRSGIACEFKVPRRKLVLGPEVSTALFRILQEALTNI
                     TRHSKATKTTIVLSAGKPGTSLTVSDNGKGITQEELDAPDALGLLGMRERMETVGGKF
                     SIAGKPGKGTVICVTTNNRKKVVSKKLNGKRTNHR"
     gene            5018..5293
                     /locus_tag="VIT19_07045"
     CDS             5018..5293
                     /locus_tag="VIT19_07045"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HEY5838774.1"
                     /translation="MNTSAIKVYPGKRVEFLQTVKQLLAPINRAVGCRQFRLYVDVAD
                     EDSSLLLGEWESEADLDNYLRSNPHAILHGAIMVLGKEKKEMKAIVD"
     gene            5635..6870
                     /locus_tag="VIT19_07050"
     CDS             5635..6870
                     /locus_tag="VIT19_07050"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5838775.1"
                     /translation="MPSDTRAAEATLADDVKELLDNKVTQIQGRYSYAGRPTSLSLLV
                     HAARLDIPGSQSTVLISHDDEDPKEALRKSEQRLSKLLETTKIVAWEADPETWRFSYV
                     SNQARELLGYPIVAWYAPDFLISNIYPEDVQSALRTFREQSRINDSFEVTFRIIASDG
                     RPVWIHNLVSVTRCGNKTVGVNGFMIDITEQRRIKDVLRDLGSRLIAAQEEERSRVAR
                     ELHDDLNQRMALLSIELEQLETDRQRQPVLHRHVQRLKQQVEEIAVDIHRLSYRLHPS
                     KLDHLGLAPAVESLCRELSSDKLTIHSEQNGFPANLSQDITLCLFRIAQEALRNCVKH
                     SQAEIAVVALDNLGDEICLAVSDDGCGFDMESGAMQHGLGFTSMRERLRILNGEIEIR
                     SQPMHGTTIKVSIPLTCSH"
     gene            6945..7583
                     /locus_tag="VIT19_07055"
     CDS             6945..7583
                     /locus_tag="VIT19_07055"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5838776.1"
                     /translation="MLSTRVILADDHRLMLDALKKLLEPEFAVVGEFGDGLELIKAAP
                     QLNPHVIILDIGMPTMNGLTAGQRLKQLMPAVKLIYLTMSPDPDMAAEAFRLGANGYL
                     LKSSAGSELVSAIRSVVRGGSYITPRMTEDIVGSSISYFKNLKSANHLTLRQREVLQL
                     LAEGRSMKEAAFILNVSPRTVAFHKYTMMEHLHIKSTAELVQYALSSRLVAA"
     gene            7857..8276
                     /locus_tag="VIT19_07060"
     CDS             7857..8276
                     /locus_tag="VIT19_07060"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5838777.1"
                     /translation="MTRPRILLADDHKEMRDRIKRHLELEFEVVAAVGNGRTLLEAAA
                     RFNPDICLLDISMPVLNGIETAIQLKERGSTAKVLFLTIHEDPDFMDAALKTGASGYV
                     LKRRMASDLRPAIRDVLAGKTFVSSFRGFPGQTNKGM"
     gene            complement(8539..9000)
                     /locus_tag="VIT19_07065"
     CDS             complement(8539..9000)
                     /locus_tag="VIT19_07065"
                     /inference="COORDINATES: protein motif:HMM:NF019500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEY5838778.1"
                     /translation="MARVLLLAFAIMGLCLVIHVTGIVILGEEVVRRRAKIEERSGFT
                     YAAGMLMVVFAIIVLLHLIEATVWAVFYYWSGLFSSFESALYFSLTSYSTLGYGDVLL
                     PPSWRLLGTIEGISGVLLCGLSTAFLFAVVNALFSFGGLRVRRERIHKTVK"
     gene            9194..10522
                     /locus_tag="VIT19_07070"
     CDS             9194..10522
                     /locus_tag="VIT19_07070"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY5838779.1"
                     /translation="MNFKRICRLYVRAAPSMIALVLISTGCNKKDASKKAAAVPPPTV
                     IVEQVTEKTVPIYSEYVGQTRAEETIELRARVEGILQKVYFREGTPVRKGQLLFTIDK
                     RPFQASLQSAKAILAKAVADQAQAEQRTDVLKARAELADADATHSKTQQDLARLRPLA
                     REKAVTELELDAAIAAEKSAKANVDAKQANLTNLEASVKYTIERAKAEVAAARARVIQ
                     TELDLSYCDIHAPINGVIGFLQVDEGNLVGRVDATLLATVSLSNPLLVDFNLSEVEFL
                     KITNPGDEPGKRARASGTRFELILSDETKHPEYGSFKVIDRAVDPTTGTMKVQASFPN
                     PGSYLRPGQFARVRVAVSEIENAVLVPQRAIQELQGAKTVMIVDAQNKVQVKTIKVGD
                     KSENYYVVLEGLKAGDRVIVEGMQKARPGSEVKPFSMQMASDNGPHKEGS"
     gene            10526..13720
                     /locus_tag="VIT19_07075"
     CDS             10526..13720
                     /locus_tag="VIT19_07075"
                     /inference="COORDINATES: protein motif:HMM:TIGR00915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0042908 - xenobiotic transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HEY5838780.1"
                     /translation="MANFFINRPIVAIVISILTLLLGVVVIRGLSVEQYPFLAPPNIR
                     VTATYPGASAEAVEQSVAVPIEQEVNGVDNMIYMKSSNTSDGRMLLDVNFQVGTDQDT
                     ANVLTQNRQASAAARLPAEVTQQGVTVKKQSPSILMVVSLYSPKDSYDANFLINYCGI
                     NLRDQLLRIPGIAQVDLFGGTDYGMRVWFKPDMMAKLGLVPADVINAIKEQNIQAPAG
                     KIGGAPTPKDQEMTNTVSAPGRLITPEEFEQVIVRQTASGAVVRIKDIGHVELGSQDY
                     NSFGRLNGKPGGAMAVYLLPGANQLKAAETIYETMDHAKALFPPDLDYKVVYDTTPAV
                     EASIESIIHTFVEALILVVLVVYIFLQNIRATIIPILTIPVSLVGTFIFFPVLGFSIN
                     TLSMFGLVLAIGIVVDDAIVVVEAVIHHLEHGLNPKEATIVAMKEVSAPVIGIALILS
                     AVFVPVALLGGLVGNMYKQFALTIAISVLLSAFNALTLTPALCALLLKPPKPAWGPLG
                     VFFRWFNKAFDWVTNGYVAGSRILVRKGIITIAIVGVVILGAIFFGKRIPAGFIPEED
                     QGILGVNVQLPPGASLERTSEVLKKVEAVLAKVHAIESYQTVGGYGVVTNTYQPNYGT
                     LFARLKPWEERHDEKEKIKGIMAELQKEFAGIPQAIVFPFNIPTLSGFGAASGFNFLI
                     QDRSGSMTVQQLGENSTKFLTAARQRPEIGNIFTSFDPNYPQVKVELDREKARTLGVP
                     VNEVFQAMSTAMGGAYVNDFNRFGRLYRVYVQAQPESRLKAEDIGHIYVRSKSTNQMI
                     PLSTLVSVKDIAGTELTTRFNLLRSVELTGAPAPGYTSGQALAALEAVFAQEMPKETS
                     FAYSQMSYQEKIAPPPLPTLVLAILCVFLLLAAMYESWRLPWAVLLGSPLVALGALFG
                     VWWFGYDNNVYVQIGLVMLIGLAAKNAILIVEFAKAKHEKDGLSLEDAALLSAKLRFR
                     PILMTAFAFILGVIPLMKASGAGAGAQNVMGTGVFFGMLVATALGVFIIPGNYTFIES
                     LGRKRKKAAQPPPESVPPQAGHGAALPVEVGGGH"
     gene            13720..15126
                     /locus_tag="VIT19_07080"
     CDS             13720..15126
                     /locus_tag="VIT19_07080"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEY5838781.1"
                     /translation="MKRAIIGLLIASFAPTNAVAQKNPKVPQVQTPAVYRADPNTTPS
                     PQSLADTRWFEVFRDPRLQELIREALLHNYDLRESVARIDRARANLGLTRSEQFPTIG
                     ASADLVTVGRSRDGELTIPEPLPKGRTFGSLLLNLLTFELDIWGRLRKQTQAARADLL
                     ATEEARKAVLTTIVSDVAGSYFILRELDFELEIAKRTLGLRRESLRIITLRQQRGVAN
                     LLEVRQAEELVYNATETIPDLERAIEQQENFLSVLVGRNPGAIARGVSLTEEQMPPSV
                     PPGLPSDLLVRRPDIRAAEASLIAAGARIEVARKAYFPRISLSGFLGFESASLSDLFK
                     SSRGVWGLIPQVTQPIFTGGRLKSNVRFTQAQRDLFLVDYERTIQNAFREVSDALIAY
                     RKVREVRAQRELLVTTLQDRSRLSYMRYTGGVANLLEALDADRELFDAERSLAQARRD
                     ELLTVVQLYKTLGGGWQQ"
     gene            15131..>15666
                     /locus_tag="VIT19_07085"
     CDS             15131..>15666
                     /locus_tag="VIT19_07085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding SYLF domain-containing protein"
                     /protein_id="HEY5838782.1"
                     /translation="MKLKAIIRKRLMPSFAVLAIVVCGGTNLQAQKAAELDKKVDEAT
                     AKLFANSDTAKNLSKVAKGILVFPTVKKAGFMVGGQRGEGALRVAGKTTGYYKTTAAS
                     FGLQAGAQKFSYAMFFMTDGALQYLKSSKGWEVGVGPSIVVVDAGVARSLTTSTAKES
                     IYVFFFGQKGLMGGLGIQG"
BASE COUNT         3584 a         4268 c         4346 g         3468 t
ORIGIN      
        1 tcgcgccgtc gattacgtct tccgcgtgac gaaccccgcc ttcgagcggc ataccggctg
       61 gcacaacgtg gtcggcgtac gcgtccgcga actcgcgccc gacctggagg agtattggtt
      121 cgagaagtac gcgcaggtcg ccgccaccaa catgcccgtg cggtttatgg accgggccgc
      181 tgcgctgaac aggtggtacg aagtctatgc cttccgggtc ggcaaggcgg ggagccgcac
      241 cgtggccgtg atcttcagtg acgtatccga gcggattcgg gccgagcgga ctttgaagga
      301 aagtgaagcg cgcttccgga acatggccga caccgctccc gttttgattt ggatctgcga
      361 tgccgacagc ctgtgtactt acgtaaacca acggtggctc gagttcacag ggcgaacact
      421 ggagcaggaa ctgggtagcg gttggaagca gggaatacac ccggacgact ctgagcggtg
      481 catggaaact tacgcctctg cttttcccaa ccatgagccg tttagattgg agtatcggtt
      541 gcgtcgcgcg gacggtgtgt ttcggtgggt tttcgacagc ggaacgccgc gtttttccca
      601 aggtgacttt ctcggttaca tcggttcatg cgtcgacatc acggatcgca aagagtcgga
      661 ggcggctttg gtcgccgcgc acgagcagtt ggtgatcgct cacactgagg tgagcaggct
      721 aaagaccgag ctggagcagg aaaacatcta cctgcgcgaa gagctccatt ctgatcagac
      781 gcgtggggaa atggtcggtg agagcgacgc cataaaatac gtggtcttca agatcaacca
      841 ggttgcggtt acggactcaa ccgtcctgat taccggggaa acgggaactg gaaaagaact
      901 cgtcgcacgc gcgattcaca cggccagctt acgaaacgat cggcccttca tcaccgtcaa
      961 ttgcgcagcg ttgccggcca acctgattga aagtgaattg ttcggccatg aaaaaggcgc
     1021 gttcaccggc gcgacggcgc ggaaactcgg ccgcttcgaa ctggcgcacg tcggtacggt
     1081 ttttctggac gagattggcg agctgcccct ggaatcgcaa gtaaagcttc tgcgagtgct
     1141 gcaggaaggc gagatcgaac ggctcggcgg agcgaaagca atcaaggtag atgtccggat
     1201 catcgctgcc actaatcgca atttgagaca agcgatcgaa aagggaacct tccgcgagga
     1261 tttgtggtat cggctaaatg tattcccgat cactgtcccc ccgctgcggc aacgcaaaca
     1321 agatgttccg ttactcgtcg aacattttgt tagccactat gcaaagaagt tcggaaaaac
     1381 gatcacttct atttcgcctc gtacgatgca agacctcgag cactacatgt ggccggggaa
     1441 catacgggaa ttggctaacg tagtcgagcg agctgttatt tatacgcagg gagatgttct
     1501 gcatgttgtt gatttgtctg agtcggctcg ggaacagact ccggccgcca tcaagagcct
     1561 ggaacagatt gagcgggaat acatcctcta catactggaa cagagcggat ggcgcatcga
     1621 gggtccgcat ggggcagcca agcttctggg cctgaatccg agcacgctca gaactagaat
     1681 gatcaaactc gacattcata agcagagtct gtctgccagc gactaaacag ccgccttcga
     1741 tcttatctaa ttgtgctcct gcccgcgccg gctaaacccg tcaaaactga cagtatcaat
     1801 ccgagcaatt ccaaaacgtc catcaggtta atctgcgcac gagccgtaga agatcgagca
     1861 gatctcgtaa ctgccacttg accagataaa acgtggcgcc tgcctggcga caagcgattc
     1921 ttatttcgga agaattctcg gccgtgaaga tgatgatgat gacgccttga tctatctttc
     1981 gaatgccgcg caatagctca acgcttggat gagcgggcga aacgtccatt agcacaacgt
     2041 caggttgttc tttgatcagc aggcggagag cgtcattgag ctccgtagcc attccaacca
     2101 cgtggcagcc ttcgctttgc gcgaaggcga cccgaagtgc ttcctggata acgtcagact
     2161 tttcaatcac cagtattcta agatccttta atggttgctg gtccatcgcg ccagtgtgag
     2221 cgttcgagcc cgccggcaac aatcaaggga aaaatgattt tgttgtcgtc gacctacacg
     2281 atgtgaatgt agtagaacgt tctacgggaa ggagcagcgg ccacaaaaag aatcgtgccg
     2341 atggtcaagt ggcgagcttg ttttgaatcg catacttaat taactcggcg gtcgttcgca
     2401 gacgcatctt gtcgaggatc cgggcgcggt aggtgctgac ggtgggtgga ctaagcctca
     2461 gcgtagcggc aatttctttg gtctttttac cctggcccat cagacaaagt atttgaaact
     2521 cccgatcgga gagcttctcg tgcagctggg attcatgagt gtcttgccaa ctttgcagaa
     2581 ggagatcggc agttcgcccg ctgatatgcg tggaaccccg caagattttc cggatcgcac
     2641 ttgatagctg ttcgggggcc gcatccttcg aaagaaaccc tgacgctccg gccttcaata
     2701 cgcgcaccgc aaattggtct tcgggataga tgctgagcac caaaacgcgt gacttccggt
     2761 gcgttcgacg aatttccttc aagagatcta atccgcttgt tcccggaaga tccaaatcga
     2821 gtatgacgag cgcgaaagaa ttttgcttca tgagttgcag tgcctcggcg gcttcgcccg
     2881 cttcggtcag ctcgagatcc tcttcgcccc gcaggatttc cttcagtccc cgccgcacaa
     2941 tcgggtgatc atcgatgatt agtacgcttg ccattgagct tctttgaaac cacctttttg
     3001 cggttgtttg tagttacgca aattaccgta ccttttcccg gcttgccggc aattgagaat
     3061 tttccgccca ctgtttccat gcgctcgcgc atgccgagaa gcccgagagc gtccggggca
     3121 tcaagctctt cctgggtaat accttttcca ttgtcgctaa cggttagaga agttccaggt
     3181 ttgcccgcgc taagaacgat cgtcgttttc gtggctttgg agtgtcgcgt aatgttggta
     3241 agggcctcct gaagaatgcg aaacagcgcc gtggaaacct cgggacccag caccaatttg
     3301 cgccggggaa ctttgaattc gcaggcgatc cctgaacggc gcgagaactg ctggcactgc
     3361 cattcgattg ccgccggcag accgaactga tcgagtacgc ccggtctcaa ttcggttgcg
     3421 atcgctttca cggcgccgat tgtgttaccc agaacttcat taatttccgt gaaccggcgc
     3481 gccacgctag tgctgactcg cgagtgttcc gatttcagcg tcctccgcaa cccggcaagc
     3541 tcgatcttaa tgctgatcag tgattgtccg agactgtcgt gcagttcgcg cgccagttct
     3601 gcccgttctt tttcgcggac tgattgcagg tgtgctgaca acgcgcgtaa tcgctggtgc
     3661 gattcggcga gcccgtcggc aattcgacgt tcctcacttc gatctgtctg gacgctccac
     3721 actcgcagca gcattccgtt cacgacaatt ccaagcaagc tcgtggataa atattttcta
     3781 ttgtgatcac gagtaacgac ttctgtgagc cagttccgga gccggtagtt gttttcgatc
     3841 aatgccgtga gtgagacatc ggtcggcggt tgtgaaatct ccgtgagatc gccaaaacgc
     3901 gatccgataa tgtcttctgc tcgatgccga ctgtacattc gcgcgaaggc gtcattgcat
     3961 tctgcgaggt aggcattttc acgcaacaat ctgagctgct ctttcgcagg caaagttgtg
     4021 tctattgggt tttgaatctc aaaacgccat attccctcag aactgttcgc gatgaacgag
     4081 cgataccgct cttcactaag ccgcaacgca tcatgggtgt gcttacgatc ggtaatgtcc
     4141 tcgaccattg ccaatccgta gagcggcttt cctcgcttat ttcgcaccag tagggccgtc
     4201 aaatccagcc aggcgaccgt accttgttta gtgacgaagc gcttttccag gtggtacgag
     4261 ggaatctctc cccggaacag gcactccgcg agttcagtgt cccactggat gtcatcagga
     4321 tgggtaatct cgatgaactt acgcttgagc aattccccag cgtcataacc gagggcagcg
     4381 caaagcgagc ggttaactcg cctaaaacga aagtcaaagt cgatgatggc cataccgaac
     4441 ggtgagtttt caaatgcgag ttgaaaacac tcctcagttt cttgcgagct caattgaccg
     4501 ttccgcgccg gagcgcggcg gcctcgcccg atctgatttc cccgtcgctt tgaagagttt
     4561 cgacgttctg ccatggacat ctctcgcttc cccgaggtct atgcagaatt agaccggcgc
     4621 gcagatgcgc tccggaaaac tggtccactt ggggaatcgt aagggttggt tagcagcttt
     4681 tccgcggcgg gcgaaactgt caattgttac agtcagagag tgcgttgtgt tcagcccgcg
     4741 gtataccgcg gaaccgcgga atacggtagg tgaacggtgc taagtccgcg ggcgctttgc
     4801 acctcgcgtt ggacgtaaac tcttgcaatc aaaagcaatc aaccagagct ctcacgttgc
     4861 agtggtcttg cacaggtatt gcaaggatat tggcgaggat cctaacgccc gtgagtcggg
     4921 atatacagca caccaggaat tgttccagcc ccggacctgc aaccccccag gtcgttagcc
     4981 tgacatcgtc tttctagtgg gagttatgga gatggttgtg aatacatcag caattaaggt
     5041 gtacccgggt aagcgagtgg agtttctgca aacggtcaaa cagctactcg caccgattaa
     5101 tcgagccgtc ggctgcaggc agtttcgtct gtatgtcgat gtcgcagacg aagactcgtc
     5161 tcttctgctt ggtgagtggg agtcggaagc cgatttggac aattacctga ggtcaaaccc
     5221 gcacgccatt ctgcacggcg caatcatggt actgggtaaa gaaaaaaagg agatgaaagc
     5281 gatcgttgac tgacaaactt cgcgcccccc gcgatgaacg aacaccgtgc aaagatagcg
     5341 gaagacgcag tggtcgccga ccgcccgacg gcgagtcatt cggttgtgtc tatttcaagc
     5401 tgtgtcgggc gacctcgatc agcctctatg aagtcggctg agacgcccaa cgtctcagag
     5461 aaatttctgc aagatgtagt tgaagcatgc gcctcgagca tttccatgct cgatgaaaca
     5521 ggtgcgattc gatacgcgag tcgagcttgg cgcaggttcg agcagaagtg gcttttttcg
     5581 ccagaacgaa atcaactgcc gcgttacttc aagttcttcc gacgagagcc ggaggtgccc
     5641 tcagacacgc gcgccgcaga ggcaacgcta gccgacgatg tcaaagagct tctggacaac
     5701 aaagtcacgc agattcaagg caggtattcg tacgccgggc ggccaacttc actcagtcta
     5761 ctcgtacacg cagcgcgtct cgacatcccc ggttcgcagt ctacagtcct tatcagtcat
     5821 gacgatgagg atcccaaaga agcgctgcga aaaagcgaac agcggctcag caagttgctc
     5881 gaaactacca agattgtcgc ctgggaagcg gatccggaga catggcgatt cagctacgtc
     5941 agtaaccagg cgcgcgagtt gctcggctat ccgatcgttg cgtggtatgc acccgacttt
     6001 ctgatatcca acatctatcc cgaagacgtc caatccgccc ttcggacttt ccgggaacaa
     6061 tcgcgcatta acgatagttt cgaagttacc tttcgaatca tcgcgagtga tggccggccg
     6121 gtgtggatcc acaacctggt gagcgtcacg cgttgcggca acaagactgt cggtgtcaac
     6181 ggatttatga tcgacatcac cgaacagagg cgaatcaagg atgtgttgcg ggatcttggc
     6241 agccgattaa tcgctgctca ggaagaagag cggagtcgcg tcgcccgtga attgcacgac
     6301 gatttgaacc aacgtatggc gctcctgtcg atagagctgg aacagttgga aactgatcgc
     6361 caacgtcagc cggtcctgca tcggcacgtc caacggctaa agcaacaggt agaagagatc
     6421 gcggtcgata ttcatcgtct ctcgtaccgg cttcaccctt ccaaactgga tcacctgggt
     6481 ttggcgccgg ccgttgagag cttatgtcgg gaactttcaa gtgacaaact aaccattcat
     6541 agcgaacaaa acggcttccc cgcgaatctt tctcaagaca tcacgctctg tcttttcagg
     6601 atcgcacagg aagcgttgcg caattgcgta aagcacagtc aggcagaaat cgcggtcgtg
     6661 gcactggata acctgggcga tgagatttgt cttgccgtct cagatgacgg ctgcgggttt
     6721 gatatggaat ctggcgcgat gcagcatggt ttgggcttta ccagcatgcg agagcgtttg
     6781 cggatcctga acggcgagat cgaaatacga tcgcaaccga tgcacggcac aacaatcaag
     6841 gtttctattc ccctaacctg ttcacactaa gcaggcgtcg cgggaaaatt cgtcccggcc
     6901 agtgcggttt cccccaggct ggggctttgg agcagggagg atttatgcta agcacccgcg
     6961 taatactcgc agatgatcac aggctgatgt tggatgccct caagaaactg cttgagcctg
     7021 aattcgctgt agtcggtgaa ttcggagacg gcttggaatt gataaaagct gccccgcagc
     7081 tcaatcccca cgtgatcata ttggacatcg gcatgccgac gatgaacggt ttaactgccg
     7141 gacagcgatt gaaacagttg atgccggcgg tcaaactcat ctacttgacg atgtccccgg
     7201 atccagacat ggcggcggaa gccttccggc ttggagctaa cgggtatctg ttgaagtcat
     7261 cagcgggatc ggagctcgtt tccgcaatcc gttcggtggt gcgcggtgga tcatacatca
     7321 cgccgcgaat gaccgaggac atcgttggat cttcgattag ttactttaag aacctgaaga
     7381 gtgccaatca cctgacgctc agacaacgcg aagtactgca acttctcgcg gaaggtcgat
     7441 cgatgaagga agcggctttc atcctcaacg tgtcaccgcg aaccgtagct ttccacaagt
     7501 acacgatgat ggagcacctt cacatcaaga gtactgctga gttggtccag tacgcgttga
     7561 gcagccgatt agtggctgcc tgaatccacc gtcaacctcg caattggcgg ccactcgtta
     7621 cctcaaaatc agagtgcttt cgcccggtca gccctcaccg gctgactgtg ccggcgattc
     7681 gctggttcgt tgccgggaga ctgagcgatg tgctgagtca gatctcaaag ttgagtccct
     7741 gttaattttg ctagtcccaa tgtcagcgtt ccccgaatag actcggaatg acgtttcccc
     7801 gaaccgactg aacttttaac agtcacgttc ggcaaatcca cttcaatgga ggagccgtga
     7861 ctcggccccg aattcttttg gctgatgacc ataaggagat gcgcgatcgc atcaagcgcc
     7921 acctcgaact cgagtttgaa gtggtcgccg ccgtgggaaa cggccggacg ctgctggaag
     7981 ccgccgccag gttcaacccc gatatctgct tattggatat ttctatgccg gtgctgaatg
     8041 gcatcgaaac ggctattcaa ttaaaggagc gcggttcaac ggccaaagtc ctgttcctga
     8101 ccattcacga agatcctgat tttatggatg cggcactcaa aaccggcgcg tcaggatacg
     8161 tcctcaagag gcggatggcg tcggatttgc ggccggctat cagagacgtg ttggccggta
     8221 agacgttcgt ctcctcgttc aggggtttcc ctggccagac caataaggga atgtaaatgt
     8281 gacctcaggc ggccccggat ttgttttcag aatcagtaaa ggcctttgtc gcccacatgg
     8341 cactcaccgc cctcaacgcg cgcccccgcg ctaaccaatt ctaaagcgac cgaacaccgc
     8401 tatcgtcggt actttcctca cctgctccga atgggccgaa agccacatgg cctaagtcgg
     8461 cccatttgca tttcgtgccg aatccgtcta gtccgcacgc taattgatcg atttaacgtg
     8521 gagagtggtg agcggaagtt actttaccgt tttgtgaatg cgttctctac gcacacgcaa
     8581 gccaccaaag ctgaataagg cgtttacgac ggcgaacaga aacgcagtcg agagaccaca
     8641 caagagcacg ccggagatgc cctcaatcgt gcccagcaaa cgccaacttg ggggcaaaag
     8701 gacgtctccg taacccagcg tggaatagct cgtaagcgaa aaatagagtg ctgactcgaa
     8761 gcttgagaac aggccactcc agtaatagaa aacggcccag acagtagctt cgatcagatg
     8821 gagcaggacg atgattgcaa atacgaccat cagcatcccg gcggcatagg taaacccgct
     8881 gcgctcttcg atcttcgccc ggcgccgaac aacctcttcg ccaaggatta cgatgcctgt
     8941 gacatggatc accaggcaaa gccccatgat ggcgaaagcg agaagtagta ctctggccat
     9001 tgatcctacc aaaatactgt tcttccagtc gccaaaaaaa ccgtcaattt tgacagtatg
     9061 ggttctaccg gcgccgacct aaaattcgcc tcagttggcg cctgaatccc agctgggctg
     9121 ccgaatcaaa aggtaacggc cgaaagccct gtcgatcgtc cggcctgcgg tcgccggcga
     9181 ggaggaatta acgatgaact ttaagcgcat ttgccggctg tacgttagag cggcaccatc
     9241 gatgatcgcc ctcgtcttga taagtacggg ctgcaataag aaggatgcat ccaaaaaagc
     9301 agccgccgtt cctccgccta ccgttatcgt cgagcaggta accgaaaaga cggtaccgat
     9361 ctacagcgaa tatgttggcc aaactcgcgc ggaagaaacc attgaattgc gcgcgcgcgt
     9421 tgaaggcatt cttcagaagg tttatttccg cgagggcacg cccgtccgca aagggcaact
     9481 actcttcact atcgacaagc ggccttttca agccagttta cagtcagcaa aagcgatcct
     9541 cgcgaaagct gtcgccgatc aagctcaggc cgaacagcga actgatgtct tgaaggcccg
     9601 ggccgaattg gccgacgctg acgctaccca tagcaagact cagcaagacc tcgcgcgtct
     9661 cagaccgtta gcacgagaaa aagctgtaac tgaattggaa ctggatgcgg caatcgcggc
     9721 cgagaagtcg gctaaagcca acgttgacgc gaaacaggcc aacctcacga atttggaagc
     9781 ctcggtgaaa tacaccattg agcgtgccaa agctgaagtg gcggctgcca gagcgcgcgt
     9841 aattcagacg gaactggatc tcagttattg cgacatccat gcaccgatta acggcgtcat
     9901 cggctttctg caagtggatg aaggaaacct ggtcgggcgc gttgatgcga ctctcctcgc
     9961 gactgtttcc ttgtcgaatc ctctgctggt tgatttcaac ctcagtgaag tcgaattcct
    10021 gaagattacg aaccctggtg acgagccagg aaaacgcgcg cgcgcatccg gcacgagatt
    10081 cgaattgatt ctttcagacg agacgaaaca cccggaatac ggcagcttca aagtgatcga
    10141 ccgtgccgtc gatccgacca ctggaacgat gaaggttcag gccagcttcc cgaatcctgg
    10201 aagctatctg cggccaggac aatttgcgcg tgtgcgcgtg gccgtttcag aaatcgagaa
    10261 cgccgtgctg gtcccgcaac gagcaattca ggaattacaa ggcgcgaaga cggtgatgat
    10321 tgtcgatgcc caaaacaagg ttcaggtaaa aaccataaag gtcggcgaca agtcggaaaa
    10381 ttactacgtc gtgctggaag gactgaaggc aggcgaccgc gtgatcgtcg aagggatgca
    10441 aaaggcgaga ccgggcagtg aagtcaaacc ctttagtatg cagatggcaa gcgataacgg
    10501 accacataag gaaggaagtt aagcagtggc gaacttcttt atcaatcgcc cgattgttgc
    10561 gatcgttatc tcgattctga ccctgctgct gggcgtggtg gttatccgcg gactttcagt
    10621 cgaacaatat ccattccttg caccgccaaa tattcgcgtt acggccacat atccaggcgc
    10681 gtccgctgaa gccgtcgaac agtcagtcgc cgttcccatc gaacaggaag tcaacggcgt
    10741 cgacaacatg atctacatga agtcgtcgaa caccagcgac ggccgcatgc tgctcgacgt
    10801 caactttcag gtaggaacgg atcaggacac cgcgaatgtt ctcacgcaga accggcaggc
    10861 gtcggcggct gcgcgcctgc cggctgaggt gacccagcaa ggcgtcaccg tcaagaaaca
    10921 gagcccgagc atcctgatgg tcgtttcgct gtactcgcct aaggattctt acgacgcgaa
    10981 ctttctgatc aactactgcg gcatcaatct tcgcgatcag cttcttcgca ttccgggcat
    11041 tgcccaggtc gatctcttcg gcggcaccga ctatggcatg cgggtctggt tcaagcccga
    11101 catgatggcc aaattgggac tggttcccgc cgatgttatt aacgccatca aagagcagaa
    11161 cattcaggcg ccggccggaa agattggcgg cgcgcccacg cccaaagatc aggaaatgac
    11221 taacacggtc agcgcgccgg ggcggctgat cacgccggaa gaatttgagc aggtcattgt
    11281 gcgccagacc gcgagcggcg cggtcgtgcg catcaaggac atcgggcacg tcgaactcgg
    11341 gtcacaggac tacaactcgt tcgggcgtct taacggcaaa ccgggcggcg ccatggccgt
    11401 ttatctgctt cccggcgcca atcaactaaa agcggcggaa acgatctatg aaacgatgga
    11461 tcacgcgaag gcgctatttc cacccgacct ggattacaag gtcgtctatg acacgacccc
    11521 ggcggttgaa gcctcgattg agtcgatcat tcataccttc gtcgaggcgc tgatcctggt
    11581 cgtgctcgtc gtttacatct ttctccagaa cattagagcc acaatcattc ccattctgac
    11641 aattcccgtg tcgctagtcg ggactttcat cttttttccg gtgctcggat tttccatcaa
    11701 cacgctttcg atgtttggcc tggtactggc gattggaatt gtggttgatg acgctatcgt
    11761 tgtcgtcgag gcagtgatcc atcatctcga gcacggtttg aatcccaaag aagcaactat
    11821 cgtggcgatg aaagaagttt cggcgcccgt gatcggcatt gcgctgattc tgtcggcggt
    11881 gttcgtcccc gttgctttgt taggcggact ggtcggcaat atgtacaaac agttcgcgct
    11941 gacgatcgcc atttcagttt tgctgtcggc tttcaatgcg ctgaccttaa cgcccgcgct
    12001 ttgcgcgctg ttgctgaagc cgccgaaacc ggcttggggt ccgctcggcg ttttcttccg
    12061 ctggtttaat aaagcctttg attgggtcac gaacggctat gtcgcgggct cgcgcattct
    12121 ggtgcgcaag ggaatcatca cgatcgcgat cgtcggagtc gtgattctcg gcgccatatt
    12181 ctttgggaag agaattcccg ccggcttcat ccctgaagag gaccagggaa ttctcggtgt
    12241 caacgtgcag ctgccgcctg gcgcttcgct ggagcgcacc agtgaggtgc tcaagaaggt
    12301 cgaagccgtc ctcgccaagg tgcatgcgat tgagtcatat caaactgtcg gtggctacgg
    12361 cgtggtgacg aacacctacc agccgaatta cggcacgctc ttcgcgcgct tgaagccgtg
    12421 ggaagaacgc catgatgaaa aggaaaagat taaaggcatc atggcagagt tgcagaagga
    12481 gtttgcgggg attccccagg ccatcgtatt tcctttcaac attcctacgc tgtcgggatt
    12541 tggcgcggct tcgggattca acttcttgat ccaggatcgc agtggctcaa tgaccgtcca
    12601 acaattagga gagaattcaa caaagttcct tacggccgct cgtcaacggc ctgagatcgg
    12661 aaacatcttc acttcgttcg atccgaacta tccgcaagtc aaggtcgagc tcgaccgcga
    12721 aaaggcccgc acgctgggtg tgccggtcaa cgaagtgttc caggcaatgt ccacggcgat
    12781 gggcggcgcc tacgtcaatg acttcaatcg ctttggccgg ctctatcgcg tctatgtgca
    12841 agcccagcct gaaagccggc tgaaagctga agacatcggt cacatctatg tgcgatcgaa
    12901 atcaacgaat cagatgattc cgctttcgac gctggtctcg gtcaaagaca ttgcgggtac
    12961 cgagctgacc acccgcttca acctgcttcg ctcagtcgag ctgaccggcg cgccggcgcc
    13021 cgggtacacg tcgggtcagg cacttgcggc gcttgaagca gtgttcgcac aggagatgcc
    13081 caaggaaacg agctttgcct attcgcaaat gtcttaccag gaaaagatcg cgccgccgcc
    13141 gttgccgacc ctggtgctgg caattctctg cgtcttcctg ttgctggcgg cgatgtacga
    13201 aagttggcgg ctgccctggg ccgttctgct cggctcgccg cttgtcgctc tcggagccct
    13261 gttcggcgtc tggtggtttg gatacgacaa caacgtctac gttcagattg gtctggtcat
    13321 gctgattggt ttggccgcca agaacgcaat tctgattgtc gagtttgcga aagcgaaaca
    13381 tgagaaggac ggcttgtcgc tcgaagatgc ggcgctcctc tcggcgaaac ttcgtttccg
    13441 tccgattctg atgacggcct tcgctttcat cctgggagtc attcctttaa tgaaagccag
    13501 cggcgcgggc gccggcgcgc aaaacgtgat gggcaccggt gttttcttcg gcatgctggt
    13561 ggccacggca ctcggcgtat tcattattcc aggcaattac acctttatcg agtcgcttgg
    13621 gcggaaacga aaaaaggcgg cgcagcctcc gcctgagtcc gtcccgccgc aggctggaca
    13681 cggcgcggct ttacccgttg aagtcggagg tggccactga tgaaacgcgc catcattgga
    13741 ttattgattg cgagcttcgc gccaactaac gccgtcgcgc agaagaatcc taaggtgccg
    13801 caagtccaga ccccggctgt ctatcgggct gatcccaaca cgacaccatc gccacaatca
    13861 ctcgctgaca ccagatggtt tgaagtcttt cgggatcccc gtctgcagga attgattcgc
    13921 gaagcgttgc tgcacaacta cgacttgcgg gagtccgtcg cgcgtatcga tcgcgcgcgc
    13981 gcgaacctcg gtttgactcg atccgagcag tttcccacga ttggcgcgag cgccgatctt
    14041 gtcacggtcg gacgatcacg agacggcgaa ctgactattc ctgagccgct gccaaaaggt
    14101 cgcaccttcg gcagtctgct gctcaatctg ctgacgtttg aactcgacat ctggggtcgt
    14161 ttgcgcaagc agacgcaggc agcgcgcgcc gatttgttgg caactgaaga agcccgcaaa
    14221 gcggtgctca ccaccattgt cagcgatgtc gcgggatcgt atttcattct gcgcgaactt
    14281 gatttcgaac ttgagattgc caagcgcacg ctcggcttgc gccgggagtc gctgcgcatt
    14341 atcacgctgc gtcaacaacg aggggttgcg aatctgctgg aagtccggca agccgaggag
    14401 ttggtctaca atgcgaccga gacgattccc gatctcgaaa gggcgattga gcaacaggaa
    14461 aactttttga gcgtgctggt gggtaggaat cccggcgcga tcgctcgcgg cgtcagtcta
    14521 actgaagaac agatgccgcc gagcgtgcct cctggtttgc cgtctgattt gctcgtccgc
    14581 cggcccgaca ttcgtgcggc ggaagcaagc ttaattgcgg ccggcgcccg catcgaagtc
    14641 gctcgcaaag cctattttcc acgcatttcg ttgtcaggct ttctcggatt tgagagcgcg
    14701 tccctttctg atctctttaa gtcatcgcgt ggcgtttggg gattaattcc ccaggtaacc
    14761 caaccaatct tcacgggcgg ccggctgaaa tcaaatgtgc ggttcaccca agcccagcgt
    14821 gaccttttcc tcgtcgacta tgaacgcaca attcagaacg cctttcgcga agtttcagac
    14881 gcgctgatcg cttatcgcaa agtcagagaa gttcgcgccc agcgcgaatt gctggtgacg
    14941 acgcttcagg atcggtcgcg cctttcctac atgcgttaca caggcggcgt cgcaaacctg
    15001 ctggaagctc tcgacgcgga cagggaattg ttcgacgccg aacgcagtct cgcgcaggca
    15061 cggcgcgatg aactattaac cgtagtacag ctctacaaaa ctctgggcgg aggctggcaa
    15121 cagtaaaacc atgaaactca aagcgataat ccgaaagcgt ctgatgccct cgttcgcagt
    15181 actagccatc gtcgtgtgcg gcggcacaaa tctgcaggcg caaaaagctg ccgagcttga
    15241 caagaaagtc gatgaagcta cggcgaaact ttttgcgaac tccgataccg cgaagaactt
    15301 gtccaaagtg gccaaaggaa tcctggtgtt tccaactgtg aaaaaagccg gctttatggt
    15361 gggtggtcag cgtggcgaag gcgcccttcg cgtggcaggc aagacgaccg gatattacaa
    15421 aacgacggcc gcctcattcg gccttcaggc gggcgcgcaa aaattcagct acgcaatgtt
    15481 ctttatgact gacggcgcgc ttcagtattt gaaaagcagt aaaggatggg aagtcggtgt
    15541 cggtcccagc atcgtggtgg ttgacgcggg cgtggcccgt tcactaacta cgtcaacagc
    15601 aaaagagagc atctacgttt tcttctttgg ccaaaaagga ctgatgggcg gtctcggaat
    15661 tcaagg
//
LOCUS       DATDBY010000380         3527 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2048531, whole genome shotgun sequence.
ACCESSION   DATDBY010000380 DATDBY010000000
VERSION     DATDBY010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3527
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2048531"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(219..659)
                     /locus_tag="VIT19_07090"
     CDS             complement(219..659)
                     /locus_tag="VIT19_07090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838783.1"
                     /translation="MQPTQQIEAEQKLELVYTLLCDDVRLEVGNKLSYMGVFQSIIVP
                     QLPVWLPKLAVVNHWRGNGAHLSEVRILMPDRQQALVVSQPARFEINQGSADNISFFV
                     NVTFPVAGEYWVQTLVDSTLFEERALMVSDQLIAPAEETSEAVN"
     gene            complement(836..2851)
                     /gene="ligA"
                     /locus_tag="VIT19_07095"
     CDS             complement(836..2851)
                     /gene="ligA"
                     /locus_tag="VIT19_07095"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEY5838784.1"
                     /translation="MPKSKSTEKQINSLRDEIRRHEDLYYLEENPEISDQEYDELLEK
                     LRKLEAQHPELITPDSPTQRVGGRPAEGFPEFLHRRPMLSLDNSYNIDELRAFDARCR
                     KLADGQSLEYVAELKIDGLSLAVHYENGVFVRGVTRGDGFRGEDVTSNVRTIRSIPLK
                     LNDRAKNVANEIEVRGEAYLSRKVFEKVNREREEAGEPRFANPRNSAAGTLRQLDPSI
                     TSRRRLEMFAYDVFAGERKAFATHWEALNWLEKAGLRVNPHRALCKSIDEVIDFCDLM
                     EAKREELDYEIDGLVVKVNSTAMQEEFGATGKAPRWAVAYKYAARQATTRVNDILVSV
                     GRTGALTPVAMLEPVPLGGVTVSRSTLHNEDEIGRLGLKIGDWVLIERGGDVIPKVLK
                     VIESKRTGTEKPFKMPTTCPVCGGRVSRPEGEAVSRCIAADCPAQLIGRLLHFASRRA
                     MRVEGLGGALADQLIEKKLVKDVADLYSLTLDDLVSLERMAKKSATNVLNQIEASKSR
                     DLSSLIYGLGIRHVGERTAGILAREFASLEKLAQATVEELDAVHEIGLTMAESIHDWF
                     ADPGNARLCERLRDAGVRTEIEKAARPSAAQTLAGKIFVLTGTLPNTSRDEATAQIEA
                     RGGRVTSSVSKKTDFVLAGAEPGSKLDKANQLGVKIINETEFRKLLK"
     gene            complement(2940..>3527)
                     /locus_tag="VIT19_07100"
     CDS             complement(2940..>3527)
                     /locus_tag="VIT19_07100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838785.1"
                     /translation="KLVGFVHHLAAVRGDEVFGYSHMMAVAAEYQNFGIGAKLKWAQR
                     ARALAEGREFMKWTFEPVRARNAHFNLNRLGVVVRSYAVNFYGTDYATNATERSAGPL
                     GMDSDRLFASWELKSPRVEALADGRDVSAGAPDEVIEIPNDFGGLLKSDPSAAKAEAL
                     RIREEFLSAFSSGLVCRAFERDDKRPKYLLYKETV"
BASE COUNT          712 a         1085 c          948 g          782 t
ORIGIN      
        1 gccaatgccg cgataaactt cttcgaggaa gtccgtcagt tcgaggttag attgatcaac
       61 cgtgctctgg agctggcggg cggcaaccag gcgcgcgcag cgcagctgct gggcctggga
      121 acgacgaccc tcaactacaa ggtcaagacg tacggtctgc tttagtcgca gggatttcag
      181 tctgtgattc tgcgtttgga atcacagacc tgtgacactc agttgacggc ttctgaggtt
      241 tcttcggccg gcgcgatcag ttggtctgag accatcagcg cacgctcttc aaacagagtc
      301 gaatctacca gagtctgcac ccagtactct cccgcaaccg gaaaagtcac attcacgaaa
      361 aagctgatgt tgtcggccga gccctggttg atttcgaagc gcgccggctg agaaacgacc
      421 agcgcttgct gccgatccgg catgaggatt ctgacttctg aaaggtgcgc gccgttcccg
      481 cgccagtgat tcaccactgc caacttcggg agccaaaccg gcaactgcgg cacgataatg
      541 ctctgaaaca ctcccatgta agacagtttg ttcccgactt ccaggcgcac atcgtcgcaa
      601 aggagcgtat agaccaattc gagtttctgc tcggcttcga tctgctgagt tggttgcatt
      661 tgaaactagt ttaggctcga cgtgaggtca gtacaaggag cggtagtgac ttggtcgtct
      721 ttcttccgat cataaatctc agttggaacc cggtcgctac caccacccca cgcgggctgc
      781 ccgcgcgggg accccggtcc gctcgcagta ccgaccacat catgcgaatc gtgagtcact
      841 tcaacagctt tcgaaattcg gtctcattaa taattttcac gccgagctga ttcgccttat
      901 ccaacttcga tccgggttcg gcgccggcca gtacgaaatc agttttctta ctcacagacg
      961 aagtcacgcg tcccccacgg gcttcgatct gcgccgtagc ttcatcccgt gacgtgtttg
     1021 gcaacgtccc ggttaggaca aagattttgc cggcgagcgt ctgcgccgct gaaggccgcg
     1081 ccgctttttc gatttcagtt cgcaccccag cgtcacgcaa acgctcgcac agacgcgcgt
     1141 tgccgggatc ggcgaaccaa tcgtgaatac tctcagccat cgtcaagccg atctcgtgaa
     1201 ccgcatccag ttcttcaacc gtcgcctgcg ccagtttctc gagcgacgca aactcgcgcg
     1261 ccagaattcc cgcggtgcgt tcgccaacat gccgaatgcc aaggccgtaa atcaggctcg
     1321 ataaatcgcg cgacttgctc gcttcgattt gattaaggac attcgtcgct gactttttcg
     1381 ccatccgttc cagcgacaca aggtcgtcca atgtcaggct gtaaaggtcg gccacgtcct
     1441 tgactagctt cttttcgatc aattggtcgg caagagctcc gcctaaacct tcgacgcgca
     1501 tcgctcgccg tgaagcgaag tgcagcaagc ggccgatcaa ctgcgctggg cagtccgctg
     1561 cgatgcaacg cgaaacggct tcgccctctg gacgcgagac acgtccgccg cacaccggac
     1621 acgtcgtcgg catcttgaac ggcttttcgg taccggtgcg tttagactca atgactttca
     1681 gaaccttggg aatgacgtcg ccgccgcgct cgatcagaac ccagtcgccg atcttcaaac
     1741 caagccgacc gatttcatct tcgttgtgca gcgtcgaacg cgaaaccgtg acgcctccga
     1801 gcggtaccgg ctcgagcatc gcaacgggag tcagcgcgcc ggtgcggccc accgaaacca
     1861 gaatgtcgtt gacgcgcgtt gtcgcctgtc gcgcagcgta cttgtaagca actgcccagc
     1921 gtggcgcctt gccggtggcg ccgaactctt cctgcatcgc agttgaattc accttcacga
     1981 ccaggccatc gatctcgtag tcgagttctt cgcgctttgc ttccatcaga tcgcagaagt
     2041 cgatcacctc gtcgatcgat ttgcacaacg ctcgatgcgg attaacgcgc agcccggcct
     2101 tttccagcca gttaagcgct tcccagtgcg tcgcaaacgc cttgcgctcg cccgcgaaca
     2161 cgtcgtaggc aaacatttcc agacgccggc gcgaggtaat cgacggatcg agctgtcgca
     2221 gagtccccgc tgcagagttg cggggatttg caaagcgtgg ctcgccggct tcctcacgtt
     2281 cgcgattgac cttctcgaag actttgcgcg acagatacgc ctcgccgcgt acttcgattt
     2341 cgttcgcgac attctttgcg cgatcgttca gcttcagcgg aatgctgcga atcgtgcgca
     2401 cgttcgaagt cacgtcttca ccccggaacc cgtcgccgcg cgtcacgccg cgtacgaaca
     2461 cgccgttttc gtaatgcacc gccagcgaaa gtccatcgat cttcagttcc gcgacgtatt
     2521 ccaacgactg gccgtcagcc agtttccggc agcgggcatc gaacgcgcgc agttcgtcga
     2581 tgttgtagct gttatcgagc gaaagcatcg gccgccgatg taagaattca ggaaagcctt
     2641 cggcgggccg gccacccaca cgttgagttg gactgtcagg cgtaattagt tccggatgtt
     2701 gcgcttcgag tttgcgaagc ttctcaagca gctcgtcgta ttcctgatcc gaaatctcgg
     2761 gattctcttc gaggtagtag aggtcttcgt ggcgccggat ttcgtcgcgc agagagttga
     2821 tctgtttttc ggttgatttt gacttaggca ctcgacgaat ctttgcattt gactggaacg
     2881 caaccgtctc ggttgctttc gcaggtgaga atgcaagcgg gacgcttgcg ctccagtcgc
     2941 taaaccgttt ctttgtagag cagatacttc ggccgtttgt cgtcacgttc gaaagcgcgg
     3001 catacaagac cgctactgaa ggcgctgagg aactcttcac ggatgcgtaa cgcctcagct
     3061 ttcgccgcgg acggatcgga tttcaggagc ccgccgaagt cgttcggaat ctcgattact
     3121 tcatccggag ctcccgccga aacgtcccga ccatctgcca acgcttcgac gcggggcgat
     3181 ttcaattccc acgacgcgaa caaacgatcg ctgtccattc cgagcgggcc tgctgaacgc
     3241 tcagtcgcgt tcgtagcgta atccgtcccg tagaaattta cggcgtagga ccgcaccacc
     3301 actccaagtc ggttcagatt gaaatgcgcg ttgcgcgcgc ggacgggttc gaaagtccat
     3361 ttcatgaatt ccctgccctc ggccagagcg cgcgcgcgtt gcgcccattt cagcttcgcg
     3421 ccgatgccga aattctgata ctccgccgcc acggccatca tgtgcgagta gccgaagact
     3481 tcatccccgc gcaccgccgc caggtgatga acaaagccaa cgagctt
//
LOCUS       DATDBY010000381         5171 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_820874, whole genome shotgun sequence.
ACCESSION   DATDBY010000381 DATDBY010000000
VERSION     DATDBY010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5171
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_820874"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="VIT19_07105"
     CDS             <1..250
                     /locus_tag="VIT19_07105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838786.1"
                     /translation="DLEYQVTVTIANQLLKETEFTTRGRIQLSSSFWIYCAERHLADY
                     LEEHEHFPNNNKLTLEILNCEAVMLAFRWERPDLTSGL"
     gene            264..2222
                     /locus_tag="VIT19_07110"
     CDS             264..2222
                     /locus_tag="VIT19_07110"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEY5838787.1"
                     /translation="MAYTLKRLLVGKAKKTAAAMHERLTKKTGLAVFASDALSSTAYA
                     TEEILLVLAVAYAAQANSFNYVVPITFGIVIVLTIVAISYRQTIFAYPSGGGAYIVAK
                     ENLGTMPGLVAGAALLVDYVLTVAVSIAAGVAAITSAAQGTSLAWVADHKIIFCLVLI
                     GLIALANLRGVRESGSLFAGPTYLFVFSFLFMLGYGLISYYLNPGTTVPPAEDLKFAE
                     GYDLQPLTWFLLLGAFSNGSVALSGTEAISNGIPAFRQPESRNAATTLGWMAALLATM
                     FIGTSVMSYLYHVQPRQSETVISQFARTIFTGPMGWFYYVIQGATALILVLAANTAFA
                     DFPRLSSLLARDRFLPRQFATRGDKLVFSNGIIMLAIFSGVLVAAFGGDTSRLIPLYA
                     VGVFLSFTLSQSGMVLHWWKAGRKATQPPEPELVNTKTNTDEQKLARHWKKSIAINGI
                     GAIATCVVLIVLVMTKFTHGAWIVVVIIPLLVALFRAIHRHYMDVATQLTTAGLQKVR
                     PVEHEVIVPISGIHRGVLQALDYAKTIASGGHITALYINLDEAATQKLRTKWSGFVEG
                     VELVVIASPYRSLVGPLVRYIDRRLKLHPQKLVTVVLPEFVPAKWWHNLLHNQTSLML
                     KGALLFKPNVIVISVPYHLRADNGGDGK"
     gene            complement(2302..4266)
                     /locus_tag="VIT19_07115"
     CDS             complement(2302..4266)
                     /locus_tag="VIT19_07115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838788.1"
                     /translation="MSAFKRWLFDGWVKEIEGPFEREKEHHRHHPWYKVMCLTGVDYF
                     STLGYQPGIAFLAAGALSPIATIILVLLSLLGALPIYRRVASESPHGEGSISMLANLL
                     SWWKGKFFILILLGFVATDFIITITLSAADATAHIVENPLVHDTLQSFNHTAVNVGLT
                     IALIAFLSAVFLKGFKEAIGIAVVLVVAYLLLNLVVISVGLVHIAQNPSVIPNWERML
                     LGHPRVGGNWLMIIGIGLIVFPKLALGLSGFETGVAVMPLVKGDPGDTEENPRGRIRN
                     TKKLLVSAALIMSFMLITSSFVTTLLIPPEEFRPATADLPAGEASGRALAYLAHEYLG
                     NVFGTIYDVSTILILWFAGASAMAGLLNIVPRYLPRYGMAPEWTRAMRPLVIVFTIIA
                     FAITVIFKADVNAQGGAYATGVLVLMTSAAVAVTISAVRRKQKLWGFLFGLITLVFAY
                     TTIVNVIERPDGIKIASFFIGLIILVSLLSRIVRTTELRVDQFEIDDTANRFIDEAAA
                     QGTIRIITNRPEESNEEEYRLEMAEHREDHNLPQRDPILFLEIEVCDASDFARTMKVE
                     GKDIGGYRVLRAESAAVPNAIAAFLLYLRDRTGKLPHAYFHWGSGNPIAYLFDYVVFG
                     RGDTAPVTREVLRQAEPDEESRPAIHVGGY"
     gene            4526..5020
                     /locus_tag="VIT19_07120"
     CDS             4526..5020
                     /locus_tag="VIT19_07120"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEY5838789.1"
                     /translation="MKISAHEEYGLRCLVQLAHTQVSGLSLTLNQIAEREGLSVANAG
                     KLMGILVRAGLVQSQRGVNGGYTLARPASEIRLNEVIRVLDEDTVDSFCQQHTGVLDT
                     CIHTSDCGIRPVIVGLHEIVQSALSEITLAQLIGTEATVDAALHQIQSLQTRLGPMRI
                     EINR"
BASE COUNT         1185 a         1409 c         1448 g         1129 t
ORIGIN      
        1 cgacttggaa taccaggtca ccgtcacgat cgctaatcaa ctactcaaag agacggaatt
       61 cacaacgcgc gggcgcattc aactttcaag ctcgttctgg atttactgcg ctgagcgtca
      121 cctcgcagac tatctcgaag aacacgaaca ctttcccaat aacaacaaac ttactttgga
      181 aattctgaat tgcgaggcag tcatgctcgc gttccgctgg gaaaggccgg atctgacatc
      241 tggtctctga cgcctgcatc catatggcat acacgctcaa acgtttactg gtcggtaagg
      301 cgaagaagac tgcggcagcc atgcatgagc ggctgacgaa gaagaccgga ctcgctgttt
      361 tcgcgtcgga tgcgctttcg tcaacagctt atgcgacaga agaaatcctt ctggtgctgg
      421 cggtagccta cgccgctcaa gcgaactcat tcaactacgt cgtgccaatc acgtttggga
      481 ttgtgattgt cctgaccatc gtcgcgatca gctatcggca gacgatcttt gcttaccctt
      541 ccggcggcgg tgcttacatc gtcgctaaag agaatctcgg aacgatgccg ggattggttg
      601 cgggcgcggc tttgctggtc gattatgtgt tgacggttgc ggtttcgatc gcggcaggcg
      661 tggcggcaat cacttccgct gcgcagggaa caagcctggc gtgggttgcg gatcacaaaa
      721 tcattttctg tctcgtacta atcggtctta tcgcgctcgc gaacttgcgc ggcgtgcgcg
      781 aatcaggctc gctattcgcc gggccgacct atttgtttgt cttcagtttt ctgttcatgc
      841 ttggctatgg tcttatctct tactacctga atcccggcac taccgtccca ccggccgagg
      901 atctcaagtt cgccgaaggt tacgacttgc aaccgttgac ctggtttctt ctgttgggtg
      961 cattttcaaa cggttcagtc gcgttgtcag ggacggaggc aatttcgaac ggcattcccg
     1021 ctttcagaca acccgaatca aggaacgcgg cgacgacgct cggatggatg gcagcgctgc
     1081 tggcgaccat gttcattggc acgagcgtca tgtcctatct ctatcacgta cagccccgtc
     1141 agagcgaaac cgtaatatcg cagttcgcgc gcaccatctt caccgggccg atgggctggt
     1201 tctattacgt catccaggga gcgacggccc tgatcctggt gctcgccgcc aacactgcgt
     1261 ttgcggactt tccgcgcctt tcgagcttac tcgcgcgcga tcgattctta ccgagacagt
     1321 ttgcaacgcg cggtgacaag ctcgtcttct ctaacggcat catcatgctc gcgattttct
     1381 ccggcgtgct ggttgctgcg ttcggcggag acacgagccg cctgattcca ctctacgccg
     1441 tcggagtttt tctatcgttc accctttcgc aaagcggcat ggtgctgcat tggtggaagg
     1501 ctggacgtaa agcgactcaa ccgccggaac ccgaattagt taataccaag acgaatacgg
     1561 atgaacaaaa actggcgcgc cattggaaga aatcaattgc gatcaacgga attggcgcta
     1621 tcgcgacttg cgtcgtgctg atcgtcttgg tgatgacaaa gttcacgcac ggcgcatgga
     1681 ttgtggttgt gatcatcccg ctgctcgtcg cgttattccg ggcgattcac cgccactata
     1741 tggatgtcgc aacgcaatta acgactgcag gattgcaaaa ggtccggccc gttgaacatg
     1801 aagtgatcgt gccgatttca ggaattcatc gcggtgtgct gcaggcgctg gactatgcta
     1861 agacgatcgc gagcggcgga cacatcacgg cgctctacat caatcttgac gaagcggcga
     1921 cgcaaaagtt gcgcacgaag tggagcggct tcgtcgaagg cgttgagctg gtggtgattg
     1981 cttcgccgta tcgttcatta gtgggaccgc ttgttcgtta tatcgatcga cgtctgaaac
     2041 ttcatccaca aaagctcgtc acagtggtgc tgcccgaatt cgtgccggcg aagtggtggc
     2101 ataacctact gcacaaccag acttcgctga tgctgaaggg cgcgcttctc ttcaagccaa
     2161 acgtaatcgt gattagcgtg ccttatcatc tgcgcgcgga taacggcggt gacggaaaat
     2221 agaccatcgc cgctcttttc tttgaaaagg gggctgccga aatcaacgcg aaggctaaac
     2281 ggatagcggt gaaattgcgg ctcaatatcc gccgacgtgg attgcgggcc tgctttcctc
     2341 gtctggctcg gcctgccgca gcacctcgcg cgtgaccggc gcggtgtcgc cccgcccaaa
     2401 gactacgtaa tcgaagaggt aggcgatcgg atttcccgaa ccccaatgga agtaggcgtg
     2461 aggcagcttg ccagtccggt cgcgcagata aagtagaaac gccgcgatcg cgttcggcac
     2521 ggcggcactc tcggcgcgca gcacgcgata cccaccgatg tccttgccct cgactttcat
     2581 cgtgcgcgca aaatctgacg cgtcgcaaac ctcgatttcg aggaacagaa tgggatcgcg
     2641 ctgcggcagg ttgtgatctt cacgatgctc agccatctcc agccggtatt cctcttcatt
     2701 actttcctcc ggccgattag taatgatgcg aatcgtgccc tgcgcggccg cttcgtcgat
     2761 gaagcgatta gcagtgtcgt cgatctcgaa ttgatcgact cgcaattccg tggtgcgcac
     2821 gatgcgcgag agcagggaaa ccagaatgat tagcccgata aagaaacttg cgatcttgat
     2881 tccgtcggga cgctcgatca cgttcacgat cgttgtgtaa gcgaatacca gagtaatcag
     2941 accgaagagg aagccccaaa gcttttgctt gcgacggact gccgatatcg ttaccgcgac
     3001 cgcggctgaa gtcatcaaga ccagaacgcc ggtcgcatac gcgccgccct gcgcgtttac
     3061 atctgctttg aagatcaccg tgatggcaaa ggcgatgatc gtgaagacga tgaccagcgg
     3121 tcgcatggcg cgcgtccact caggcgccat gccataacgc ggcaaataac gcgggacgat
     3181 gttcagtaac cccgccatcg ccgaggcgcc cgcaaaccaa agaatcagaa tcgtgctgac
     3241 gtcgtaaatc gtgccaaaga cattgccgag atactcatgc gcgagatagg ccagcgcgcg
     3301 gccggaagct tcaccggcag gcagatcggc agtcgcggga cgaaattctt cgggcggtat
     3361 cagcagcgtc gtgacaaaac tgctggtgat gagcatgaaa ctcataatca gagcagcgct
     3421 aaccagcagc tttttcgtat ttcgaattcg gccgcgcgga ttttcttctg tgtcgcccgg
     3481 gtcacccttc accagcggca tgacggcgac gccggtttca aacccggaga gacccagagc
     3541 caatttggga aatacaatca ggccgatgcc aatgatcatt aaccagtttc caccgactcg
     3601 gggatgaccc agcaacatac gctcccaatt cggaatcact gaaggattct gcgcgatgtg
     3661 aaccagcccc acggagatga cgacgaggtt gagcaaaaga tatgcgacca ccaaaacgac
     3721 ggcgattccg atggcttctt tgaagccttt caggaagacg gctgaaagaa acgcaatcag
     3781 ggcgattgta agaccgacgt tcactgccgt gtgattgaaa ctttgcagcg tgtcgtggac
     3841 gagcgggttc tcgacgatgt gcgcggtggc gtcagccgct gacaaagtga tcgtaatgat
     3901 gaagtcagtg gcgacgaagc ccagcagaat caagataaag aacttgccct tccaccatga
     3961 aagcaagttg gccagcatcg agatcgagcc ttcgccgtgg ggactctcac tcgcgacgcg
     4021 ccggtaaatc ggcagcgcac ccaggagtga caacaaaacc agaatgatgg tcgcgatggg
     4081 cgagagcgcg ccggccgcaa gaaacgcaat gccgggttgg tagccgagcg tcgaaaaata
     4141 atccacgccc gtcaaacaca tcaccttgta ccagggatga tggcgatgat gctccttctc
     4201 gcgttcgaaa ggcccttcga tttccttgac ccagccgtcg aatagccacc gtttgaacgc
     4261 gctcaatggg cgtctggatt tcgctaagcg cgcgtgaata gtcatagtca gggtgcaact
     4321 cctcgactaa gggtttgagt ttcgaacttc aatgcgtgtg tgtcccgcgc aggttacgga
     4381 attattgttc ggattctgtt tcactgacgc cgaagatgtg gcgcaagttg ggcgcagggg
     4441 cacacgtcag ctccaccggc cccgaaactt gattaaaaag taaagaatgc tataatcagg
     4501 ccgaaattca agtaaatcgt caaatatgaa gatttccgct catgaagaat atggtttgcg
     4561 ctgccttgtt cagttggcgc acacgcaagt gtctgggctc tctctgacgc tcaaccagat
     4621 cgcggaacgc gagggtttgt cggtcgcgaa tgccggcaag ctgatgggga ttctggttag
     4681 ggctggtctc gtccagtcgc agcgcggcgt aaacggcggc tacaccctgg cgcgacctgc
     4741 ttctgagatt cgtttgaacg aagtgattcg cgtgctggat gaagacacgg tcgatagttt
     4801 ctgccagcag cacaccgggg tgttggacac ctgcattcac accagcgact gcggcatccg
     4861 gccggtcatc gtcgggctgc atgagatcgt ccagagcgca ctgtcggaaa tcactctggc
     4921 gcaactgatt ggaaccgaag caacagtgga tgcggcgctg caccagattc agagtttgca
     4981 aacaagacta ggaccgatgc gaatcgagat aaatagatga gcactgctga aatactcgca
     5041 aacagagaat acaaatacgg ctgggtcacc gacattgaat ccgagacgat tccgcgcggc
     5101 ctgagcgaag aaaccgttcg tgtgatctcg gcaaagaaga acgagccgga gtggatgctc
     5161 gactttcgtc t
//
LOCUS       DATDBY010000382         2252 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2507983, whole genome shotgun sequence.
ACCESSION   DATDBY010000382 DATDBY010000000
VERSION     DATDBY010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2507983"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..990)
                     /locus_tag="VIT19_07125"
     CDS             complement(<1..990)
                     /locus_tag="VIT19_07125"
                     /inference="COORDINATES: protein motif:HMM:TIGR01883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY5838790.1"
                     /translation="MINQERIKNLLLEFVQIDSHSRKEREIAERIKKYCEDMGAQVEI
                     DDAGEKVGGNSGNVIARFPGTITSAEPIMMSAHMDTVVPGEGVKPIVEGDIIRTDGTT
                     VLGGDDKSGCVVIIEVIRSLQEQNIPHTPIEAIFSICEEVGLLGAKNVDVTKIKAKYG
                     IVFDSDDPGFLFTKGPSANHMEYRIHGLESHAGVAPEEGISAIRIAAEGIAVMKLGRI
                     DEETTANIGQIEGGMATNITPNLVVMKGEARSHSEEKLEAQTKHMTKCFEDAAAKYEV
                     TVAGKTTKASVEAHVVREYSSMDVPDASHVVQLVLKAAERMGLDVKTMASGGGC"
     gene            complement(1123..1842)
                     /locus_tag="VIT19_07130"
     CDS             complement(1123..1842)
                     /locus_tag="VIT19_07130"
                     /inference="COORDINATES: protein motif:HMM:NF015961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY5838791.1"
                     /translation="MPSVANIERAYAPSDLSSYSFTERLMIRAVGLALYAVTKLLGST
                     VKFEVEGWENLEAASAGGKLPIYTTWHNGVFLSTYFWRDRGIVVMSSRSFDAEYTGRL
                     IKRFGYGTVRGSSTRGHTGASIEMIRLTRVGCPAGFTIDGPKGPRHVAKMGAVLIAKK
                     AGQPVLPFTIVPARSWEIRKSWDQTQIPKPFTRARVIIAPPIHVPADAAAGVLNAKRD
                     ELQHTLEALVQKGEQWRASIS"
     gene            complement(1845..>2252)
                     /locus_tag="VIT19_07135"
     CDS             complement(1845..>2252)
                     /locus_tag="VIT19_07135"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY5838792.1"
                     /translation="IDKMYAAREMLQILQSGGTLGILVDLNTLDREAVFVDYFGVKAA
                     TTFIVAKLALRTGADVFPVFAPWDDARSKFVVQVGEPLRTDSTGDETEDVRRLTQAMT
                     GVVEDYVRRYPDQWLWIHRRWKTRPPGEPEIYG"
BASE COUNT          438 a          676 c          622 g          516 t
ORIGIN      
        1 gcagccgccg ccggaagcca tggttttgac gtcgagtccc attcgttccg ccgctttgag
       61 aacgagttga actacatgtg aagcgtccgg aacgtccatt gacgagtatt cgcgtacgac
      121 gtgggcttca acggatgcct tagtagtctt cccggccacg gttacttcat acttggcggc
      181 ggcgtcttca aagcacttcg tcatgtgctt cgtttgcgcc tcgagtttct cttcgctgtg
      241 cgagcgtgcc tcacccttca tgacgaccag gttcggagtg atgttggtcg ccatgccgcc
      301 ttcgatctgg ccgatgttgg cggtggtttc ttcatcgatc cgtccgagtt tcattaccgc
      361 aatgccttcg gccgcgatcc taatggcgga gatgccttcc tcgggagcga cgccggcgtg
      421 cgattcgagg ccgtgaatcc ggtactccat gtgattcgcg gacggacctt tagtgaaaag
      481 aaatccggga tcgtcggaat cgaaaacaat tccgtacttg gctttgatct tcgtcacatc
      541 aacattcttc gcgccgagca atccgacttc ttcgcagatg gaaaagattg cttcgatagg
      601 cgtgtgcgga atgttctgct cctgaagcga gcgaatcact tcgatgatta cgacacagcc
      661 gctcttgtcg tcgccgccca gcaccgtcgt gccgtcggtg cgaatgatgt cgccttccac
      721 aattggcttt acgccttcgc cgggaacgac cgtgtccatg tgcgcgctca tcataatcgg
      781 ctcggcgctt gtgatcgttc cgggaaaccg cgcaatcaca ttgccgctgt taccgccgac
      841 cttttcgccc gcgtcgtcaa tctcgacctg tgcgcccata tcctcgcagt acttcttgat
      901 gcgctcggcg atttcgcgtt ctttgcgcga gtgactgtcg atctgcacga actcgagcag
      961 aagattcttg atgcgttcct gattgatcat cggtcctccg cgttaccgca gtttcaagtt
     1021 acaagttcca agtttcaagt taacgccgcg aacttgaaac tcgaaacttg gaacttggaa
     1081 cttactcttg cggtgccgca atcctactac accaggtgag gttcaggaaa tactggcccg
     1141 ccactgctcg cccttttgta ccagggcctc cagggtgtgc tgaagctcat cacgttttgc
     1201 gttgagcacg ccggccgcgg catcggccgg aacgtggatc ggtggcgcga taattacgcg
     1261 cgcgcgggta aacggttttg ggatctgagt ctgatcccag ctcttccgaa tctcccagga
     1321 cctggccggc acgatcgtaa atggcaagac cggttggccg gcctttttgg ctatcaatac
     1381 ggcgcccatt ttggcgacgt gccgcggacc cttcgggcca tcgatggtga aaccggcggg
     1441 acaccccacg cgcgtgagcc ggatcatttc gatcgacgcg cccgtgtgcc cgcgcgtaga
     1501 cgagccgcga acggtcccgt aaccgaaccg cttaatcaaa cggcccgtat attccgcgtc
     1561 gaagctgcgt gaactcatga cgacgatccc ccggtcgcgc cagaaatacg tcgaaaggaa
     1621 aacgccattg tgccaggtgg tgtagatggg cagtttgccg ccggcagatg ctgcttccag
     1681 gttttcccaa ccttcgacct cgaacttcac ggtcgaaccg agcagtttcg tgaccgcata
     1741 tagcgccagt ccgacggcgc gaatcatcaa ccgctcagtg aacgagtacg aggacagatc
     1801 ggaaggcgca taagcccttt caatgttagc tacagacggc atgctcaacc ataaatctcg
     1861 ggttcgcctg gcggtcgcgt tttccagcgc cgatgaatcc aaagccattg atcgggataa
     1921 cgccgcacgt aatcttcaac gacgccggtc atcgcctgcg tgagccggcg cacgtcttcg
     1981 gtctcgtcgc cggtgctgtc cgtccgcagc ggttcgccga cttgcacgac aaacttgctg
     2041 cgcgcatcgt cccacggcgc gaagaccgga aagacatctg cgccggtgcg cagcgccaac
     2101 ttcgcgacaa taaaagtggt ggcggctttg accccgaagt aatcaacgaa cactgcttcg
     2161 cgatcgagcg tgttcagatc gacgaggatt cccagcgtgc cgccgctttg cagaatctga
     2221 agcatctcgc gcgcggcgta catcttgtcg at
//
LOCUS       DATDBY010000383         3434 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1252018, whole genome shotgun sequence.
ACCESSION   DATDBY010000383 DATDBY010000000
VERSION     DATDBY010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3434
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1252018"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1522
                     /locus_tag="VIT19_07140"
     CDS             <1..1522
                     /locus_tag="VIT19_07140"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY5838793.1"
                     /translation="RAAEDANVHKHGTSNIKFGRGAVLTVDLTNRCNMMCDPCFMDAN
                     QVGYVHEPTFEDTKAILDRAVSFKPKRQVIILFSGGEPTLSPYYLDAVAYAKKTGFYR
                     ILAATNGIRFAEDIEFCKAAKAAGQHGVYLQFDGVGEEKNKHRGVGNLFDVKVRAIEN
                     LHKVGIKVTLVVTIVNSINNDAIGQIVEFAAKNIDKVQTIAFQPVSFTGRDEDISDEM
                     RTKWRYTLAGMTHDLKDQLGGRIQPLRDWFPLSSYSAFTSVMDMLQGADAPWGWSSCN
                     CHPNCGIFTLAVVNKKTGDFRSLFEFFNYEQFMKDVAVITDTARGKKLSYAQLGMAIM
                     RNFDASKAPEGFPISQIVNLFKPSSTNSNSDRNDRMTSAGQDTLADNWRVLCVEGMWF
                     QDLFNYDFRRTEMCVIPYGTQEGEISFCAYNTGVGWRQIIENMHKTANLSEWYKENER
                     HPVYAAGHNVPNIPKRHSLSLPIVNAVLAEDIEEKPINISPYLVEEPQPEQEAVSV"
     gene            1645..2502
                     /locus_tag="VIT19_07145"
     CDS             1645..2502
                     /locus_tag="VIT19_07145"
                     /inference="COORDINATES: protein motif:HMM:NF019911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEGA domain-containing protein"
                     /protein_id="HEY5838794.1"
                     /translation="MRKSLIALSVLSAILYPTNLSQTFSQTQQTAATNQSVSPNSLKE
                     DTPIRLRLTQTLSSGTAKLHDKVDFEVIEEIKVGELVVIGQGATAIGTVTEARPKKSF
                     GRAGKLNVNIDYVRLVNGDKVSLRAIKGGSGGSHTAAMTAGVVATAIVFFPAAPLLFF
                     IKGKNIIIPKGTEITAYVAADIVIDQAKFSSKEMASPTGNPSQASEETSKEPSSFATV
                     LIKSTPDASDITIDGKFVGSTTSTLSLSPGDHTILIEKLGFKPWQRTITVSPNGSVTV
                     DATLEKIPQ"
     gene            2882..3430
                     /locus_tag="VIT19_07150"
     CDS             2882..3430
                     /locus_tag="VIT19_07150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838795.1"
                     /translation="MSNTKTVCAGVLLFCLLTLSPSAMISRAESVHQGVRFEQQYPEK
                     PPDDPFKARLIPKNSKIYIAPIQPENPNNLQADGFEHYLAAALRKKNVPLIVVADRSM
                     ADFIIEGTADQRNPGWAKKIILADFRRSTSASMTVTNLRTGVVAYADSSDRSSANRGL
                     RSSAEKLAKYLKRKIDNDEKKR"
BASE COUNT          885 a          910 c          896 g          743 t
ORIGIN      
        1 tcgcgccgcc gaagacgcga acgttcataa gcacggaact tcgaatatta agtttggccg
       61 cggcgcggtg ttgaccgttg acctgactaa tcgctgcaac atgatgtgcg acccgtgctt
      121 catggacgcg aaccaggttg gctatgttca cgagccgacg tttgaagaca cgaaagccat
      181 tctcgatcgc gcggtgtcgt tcaaaccgaa acgacaggtg atcattcttt tctcgggtgg
      241 cgagccgacg ttatcgcctt actacctcga cgcagtggcg tacgccaaga agactggctt
      301 ctaccgaatt ctcgcggcga ccaacggaat ccgcttcgcc gaagacattg aattctgcaa
      361 agctgcgaaa gcggccggtc agcacggcgt ctacttgcag tttgacggcg tcggtgaaga
      421 gaaaaacaag catcgtggcg ttggcaatct gttcgacgta aaggtgcgcg cgatcgaaaa
      481 cctgcacaaa gtgggaatta aggtcacgct ggtcgtcaca atcgtcaaca gcatcaacaa
      541 cgatgcgatt ggacagatcg ttgagttcgc ggccaagaac atcgacaaag ttcagacgat
      601 tgctttccag ccggtttcat ttaccggccg ggatgaagac atctcagacg agatgcgcac
      661 gaagtggcgt tacacgctgg cgggcatgac gcacgatttg aaggatcagc tcggcggacg
      721 cattcaaccg ctgcgtgatt ggttcccgct ttcgtcttat tcggcgttca ccagcgtaat
      781 ggacatgctg cagggtgcgg atgcgccgtg gggctggtcg tcgtgtaatt gccatcccaa
      841 ctgcggcatt ttcacgctgg ctgtggtgaa taaaaagacc ggcgacttcc gatcgctatt
      901 cgagttcttt aactacgaac agtttatgaa ggacgtcgcg gtcatcaccg acacggcgcg
      961 cggcaagaaa ctttcgtatg cgcagcttgg catggccatc atgcgcaatt tcgacgcgag
     1021 caaagccccg gaaggctttc caatttcgca gatcgttaat ctgttcaagc cttcttcgac
     1081 gaattccaat tccgaccgca acgaccgcat gaccagcgcc ggccaggaca ccctggctga
     1141 caattggcgc gtcctctgcg tcgaaggcat gtggttccag gatttgttca actacgattt
     1201 ccgtcgcaca gagatgtgcg tgattccgta cggcacgcag gaaggcgaga tttcattctg
     1261 cgcttacaac accggcgtcg gttggcggca gattatcgag aacatgcaca agacggcgaa
     1321 cctgtctgag tggtacaaag aaaacgaacg ccacccggtt tatgccgccg gtcataacgt
     1381 gccgaacatt ccgaagcggc attcattgag tttgccgata gtaaacgcgg tgctggccga
     1441 agacatcgaa gagaagccta ttaacatttc tccctacctg gtcgaagaac cgcagccaga
     1501 gcaagaagca gtttctgttt agcgaagagc tgtcgggcgc acctccgata gagcaagcgg
     1561 aaaaaatacc ggcctaattg tgctggtgcc agttccaact cgtccctggc aggcgccacc
     1621 ctcaaccgaa ggagcccgtt tgtgatgcga aagagcctca ttgcccttag cgttttgtcc
     1681 gctatcctgt acccaacgaa tctcagccag accttttcac aaactcaaca aaccgctgca
     1741 actaatcaat ccgtgtctcc gaattctctc aaagaggaca cgccgatcag gttgcgcctt
     1801 acgcaaactc tctcctccgg aacggcgaag ctgcacgata aagttgactt tgaagtaatc
     1861 gaagaaatta aggttggcga gcttgttgtc ataggccaag gtgcaactgc cattggtaca
     1921 gttacggaag cacgacccaa gaaaagcttt ggacgcgcgg gaaaacttaa cgttaatatt
     1981 gattatgttc gattagttaa tggagataag gtttctctac gcgcaataaa aggtggaagc
     2041 gggggaagtc atacggcggc tatgacagcg ggagtagtcg cgaccgctat cgtttttttt
     2101 ccagctgctc ccttattgtt cttcataaaa ggaaagaaca ttatcattcc caagggcacg
     2161 gaaatcactg cctacgtagc agcggatatt gtaatagatc aagccaaatt tagtagcaag
     2221 gaaatggcat ctcctacagg taatccttct caagcatccg aggaaaccag caaagaacca
     2281 tccagcttcg cgacggtgct aatcaagtca actccggatg cgtccgacat taccatcgat
     2341 ggaaagttcg ttggaagcac gacgtccacg ctaagcctct ctcccggaga tcacactatt
     2401 ctaatagaga aacttggatt caagccgtgg cagcgcacga tcactgtaag tccgaacgga
     2461 agcgtgacag ttgatgccac gttggagaaa attccacagt gatgcggcat cgactgtaag
     2521 agttaagagc ttgcgcattc attaagtttg ccgatagtaa acgcggtgct ggccgaagac
     2581 atcgaagaga agccgattaa catttctccc tacctggtcg aagaaccgca gccagagcaa
     2641 gaagctgtgg gagtttagtt agagttagcc acactctctc cagatctatc tctcctcgct
     2701 caaggggact ctccccgttt tttcaataca ccgaatgttt agagtcgggc tactgcccga
     2761 ccggcgggca acgcccgcct ctaaacaagt cccaggggaa caccggcgtt tcaaaacgaa
     2821 ggtgatttcg ctggccgtcg gtgaacgagc agtctcactc aaacaaaaag gagagccaga
     2881 aatgtcgaat accaaaaccg tatgcgcagg tgtacttctt ttctgcctgt taactctctc
     2941 gcccagcgca atgatttcgc gtgcggaatc cgtgcaccaa ggtgtgcggt tcgagcagca
     3001 ataccccgaa aagccacccg acgatccttt caaggcgcgt ctgataccga agaactcgaa
     3061 gatttacatc gcgcccatcc agccggaaaa cccgaacaat cttcaggctg acggcttcga
     3121 gcactatctg gcggcggcgc tgagaaagaa aaacgttccc ttgattgtcg tcgcggatcg
     3181 ctcgatggca gatttcataa tcgaaggcac ggcggatcaa cgaaatcccg gatgggcgaa
     3241 gaagatcatt ctcgctgatt tcagaagatc gacgtcagcg tcgatgacgg ttacaaacct
     3301 ccgaaccggc gtcgtcgctt atgccgactc gtccgatcgg tcttccgcca atcgcggcct
     3361 gcgatcgtcg gcggaaaaac tggcgaagta tctgaaacgc aaaatagaca acgacgagaa
     3421 gaagcgttag ctcg
//
LOCUS       DATDBY010000384         2624 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1867340, whole genome shotgun sequence.
ACCESSION   DATDBY010000384 DATDBY010000000
VERSION     DATDBY010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2624
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1867340"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            275..1321
                     /locus_tag="VIT19_07155"
     CDS             275..1321
                     /locus_tag="VIT19_07155"
                     /inference="COORDINATES: protein motif:HMM:NF013543.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEY5838796.1"
                     /translation="MTATLAFVVILVIFALIFDYINGFHDAANSIATVVSTRVLTPGM
                     AVMWAAFFNFIAFAVFGTRVAKAIGDGVRLDLITAEWRLYVLLAALIGAIVWNLITWY
                     LGLPTSSSHALLGGYAGAGIAAYGGVIGLLKADVWLRVLMFIVLSPFVGMLLGFTMMV
                     IVHWVFRRASPSRVDGIFRKGQLFSAAAFSLGHGGNDAQKTMGIITAVLTAGGIGGLA
                     YGPNGSLPEIPLWVVLSAHAAIGLGTLSGGWRIVHTMGSKITKLKPIGGFCAETGAAL
                     TLAYVTLTGVPVSTTHTITGAIVGVGATRRLSAVKWGVAGRIVWAWILTIPAAALIAA
                     LSFWIVRGIHHLIG"
     gene            1459..2301
                     /locus_tag="VIT19_07160"
     CDS             1459..2301
                     /locus_tag="VIT19_07160"
                     /inference="COORDINATES: protein motif:HMM:NF023695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3616 domain-containing protein"
                     /protein_id="HEY5838797.1"
                     /translation="MPNGMTPFVGGKFDASGVAEVSGTDGILFVDNGREGQVFWMELD
                     PKGKQVGSINSLSLGVNIEDLEGITTDGTSFYVASSQSRPKAIATEGLVRFKFDRRGN
                     TIRDAESISGLKKFLVENVAELRQEAEKTGKDGGLNIEGLAWDPRSGRLLLGLRSPIV
                     DGHALVVPLRLRDRGGAFSLDNLEVENSKAIRLPLGGVGIRGIEYDGRAKVFRIISGA
                     AENQDQTDFVLWEWNGNEQQPTARETKRFEKNLKPEGVARATAAGHNFLIVVFDASGY
                     AILE"
BASE COUNT          559 a          673 c          780 g          612 t
ORIGIN      
        1 cgccgccatc gctgagctgt ttcacgacga aaaggatccg ctaacggttt tgaagtggaa
       61 agagatttac gaaaagatgg aagccgccat cgatcgttgt gagaacgtcg ccaacattat
      121 cgaaagcgta attatcaagc acacgtaaaa agagtcagtt gtcagtagtc cgttgtcagt
      181 cgcgtttgac gtaacagtcg cgacgtcacg ttgccggcaa tcgcttccgt ttattgacca
      241 ctgactactg accactgact actgactaac gatcatgaca gccacccttg ccttcgtcgt
      301 catcctggtc atcttcgcgt tgatcttcga ttacatcaac ggcttccacg atgcggctaa
      361 ctcaattgcg acggttgttt cgacgcgagt gctgacgccc ggcatggccg tcatgtgggc
      421 ggcgttcttt aacttcatcg cgttcgccgt tttcggaacg cgggtcgcga aagcgatcgg
      481 cgacggcgtg cgtctcgatt tgattacggc tgagtggagg ctgtatgtac tgctggcggc
      541 gctgattggg gcgattgttt ggaacttgat cacctggtac ctcggcctgc cgacctccag
      601 ttcgcacgct ttgctgggcg gctacgcggg cgcgggcatc gcggcatatg gcggcgtgat
      661 cggtttgctg aaagccgatg tctggctgcg cgtactgatg ttcatcgtct tgtctccgtt
      721 tgtgggaatg ttgctcggct tcacgatgat ggtcatcgtt cattgggtct tcaggcgggc
      781 gagtccatca cgcgtcgatg gcatcttccg caagggacaa ttgttttcgg cggcggcgtt
      841 ttcgctgggc catggcggca acgatgcgca gaagacgatg ggcatcatca cggccgtgct
      901 caccgcggga ggaatcgggg ggctggcgta tggcccgaac ggatcgttgc ctgagattcc
      961 actttgggtg gttctctcag cgcatgcggc catcggactg ggcacgcttt ccggcggttg
     1021 gcgcatcgtg cacacgatgg ggtcgaagat caccaagctc aaaccgattg gcggattctg
     1081 tgctgagacg ggcgctgccc tgacgctcgc ttacgtaacc ctgaccggcg ttcccgtttc
     1141 aaccacgcac accatcaccg gtgcaatcgt aggggtcgga gcgacgcggc gcctgtccgc
     1201 ggtgaagtgg ggcgtcgccg gccgcatcgt gtgggcttgg atcttgacga ttccggccgc
     1261 cgcgctgatc gcggcgttgt cattctggat tgtacgagga attcatcact tgatcggtta
     1321 accccccgcc acgtaacctg gctctctaag ttaacaatga atttaagtct taaatatctt
     1381 aaggttctct tacctctcgc cagcttgttc tttttgaatt cgtcttgtag cagcacatcg
     1441 agtagctctg acgaagcggt gccaaatggc atgacgcctt tcgtcggcgg taagttcgac
     1501 gcctctgggg ttgccgaagt ttccgggaca gacggaattc tctttgtgga caatgggcga
     1561 gaaggccagg ttttctggat ggaacttgac ccaaagggca aacaagtcgg ctcgatcaat
     1621 agtctcagcc tcggcgtcaa cattgaagac cttgagggca ttacgactga cgggacaagt
     1681 ttctacgtcg ccagctcgca gtccagaccg aaggccatag ctacagaggg actggtaagg
     1741 ttcaagtttg atcgtcgcgg caacaccata agggacgcag aatcaatcag cggactgaag
     1801 aaattcctcg tggaaaacgt tgccgaactt cgtcaggaag cggaaaagac tggcaaggac
     1861 ggcggactga acattgaagg ccttgcgtgg gatccccgga gtggccgtct cttattagga
     1921 ttgcgttcgc ccatcgtaga tggacatgcc ctggttgtgc cgctcaggtt gcgcgatcgc
     1981 gggggcgcat tctcactcga taatttggaa gtggaaaact ccaaagcgat tcgcctgccg
     2041 cttggtggag tcggcatccg gggaattgaa tatgacgggc gcgcaaaagt attccgaata
     2101 atcagcggcg cagcagagaa ccaggaccag acagactttg tcctatggga atggaacggt
     2161 aatgaacagc agccgacggc tcgagagacg aagagattcg aaaagaactt gaagcccgaa
     2221 ggcgtagcgc gagccaccgc cgccggtcat aatttcctca tcgttgtctt tgacgcaagt
     2281 ggatacgcta tcttggagta atcagtgatc gtgacgggac aagtgttctg tttttccttt
     2341 gcgatccttt tgcgacttgg cgtctttgcg tgagaatggc tcatccgaca aaagtggtcg
     2401 gttcacgcaa aggcgctaag acgcaaaaga cacgcaaagt agcccggaca tggaatgatc
     2461 tgtaagactc gagaatagct tcttaactcg atgcacagac gcaacttcat aatcagcgcg
     2521 gcggccggcg gggtagcgct ttcgttcagt ggatttttac gccgtaccga agcattgctg
     2581 tcggaaggca gcttcgctaa atggaaggcc gcgggctatg gcga
//
LOCUS       DATDBY010000385         2507 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1857290, whole genome shotgun sequence.
ACCESSION   DATDBY010000385 DATDBY010000000
VERSION     DATDBY010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2507
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1857290"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            95..415
                     /locus_tag="VIT19_07165"
     CDS             95..415
                     /locus_tag="VIT19_07165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838798.1"
                     /translation="MKDIIATYELHGWKLRRVLARPETVSLVSEAGDLLRDAEIRKSD
                     FDALWFARSSHAGREAWELRLIAEQPFALFEAFEADESEEDRESARLEMENRMREHVK
                     PAES"
     gene            complement(419..1108)
                     /locus_tag="VIT19_07170"
     CDS             complement(419..1108)
                     /locus_tag="VIT19_07170"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEY5838799.1"
                     /translation="MTWILIGIALLFAIGGVMTALRKNVAPPQTIRTPPQSYLGINEF
                     EDATGGVTFEDVWPPDGPADKAGLVGGDIITAFDGHATVDESEMMRLLTATPSGKTVE
                     IVYIRDGETKKTSLTTMSQSDVLQLDGAFTNRGTSRGQLGFEDIDAVPVPGKNIKGVL
                     LERISPSGPAALAGLLEGDIIIEFDGVPIRTVSELVLRARRAVPYSTVKVVVIRGAEQ
                     LEIPVKIGKRG"
     gene            complement(1294..2070)
                     /locus_tag="VIT19_07175"
     CDS             complement(1294..2070)
                     /locus_tag="VIT19_07175"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEY5838800.1"
                     /translation="MPNYAGGIAQQPGAGIPYKKKRRISGMAWIIILIASLFVLGGVL
                     TAVRRSVSRPPFSGTVSAPRSHFGVDGFEDATGGVTFDNVEPPGSPADLAGLVGGDII
                     VTFDGRAATDEDEMINLLRQTPIGKTVEVTYIRDGETKTTQLTTIAEAEVNQLRRIAG
                     DRPEGRGYFGFDDDRVTKIAEPATKTYGVRLDYIERNGPADLFGLKDGDIITTFDRVP
                     IRTGGELLSRVRRAMPKTPVEVTVIRGGETLKIPVTIGRG"
     gene            2318..>2507
                     /locus_tag="VIT19_07180"
     CDS             2318..>2507
                     /locus_tag="VIT19_07180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838801.1"
                     /translation="MDGMVASKISGAPARETPTVSGFEPERVVFNKPTRKTMEVTKAL
                     AALQPLYRKGNIEIVTRDG"
BASE COUNT          534 a          723 c          698 g          552 t
ORIGIN      
        1 taagcacgcg agtcaaggac gagccataat aatcgcgtcg ggcttatccg ccaactgcgc
       61 gttatactcg acgctcaagg attcattgga gctaatgaag gatatcatcg ctacttatga
      121 gctacatggc tggaaattgc gacgcgtgtt ggcgcggccg gaaactgttt cactagtttc
      181 tgaagcaggc gatctcctcc gcgacgctga aattcgcaaa tcagatttcg acgcactctg
      241 gtttgcgcgt tcgtcacacg ccgggcgtga agcatgggag ttgcgcttga tcgcggaaca
      301 gccttttgcc ctgttcgaag ctttcgaagc tgatgaatcg gaagaagatc gagaatcagc
      361 gcgccttgaa atggagaatc gcatgcgcga gcatgtgaag ccggccgaaa gctgagcttt
      421 agccgcgctt gccgatcttt acgggaatct cgagttgttc agccccgcgg atgacaacca
      481 cttttacggt gctgtaggga actgcccgcc gggcgcgcaa cacaagttcg ctcacagtgc
      541 gaattggcac accatcgaat tcgataatga tatctccctc cagcagcccg gcgagcgccg
      601 ccggaccact ggggctaata cgttcgagta gtaccccttt gatgtttttg cccggcacag
      661 gcacggcatc gatatcctca aatcccagtt gaccgcgcga cgtgccccgg ttcgtgaagg
      721 ctccgtccag ttgtagcacg tccgattgag acatagtcgt aaggctggtc tttttcgtct
      781 cgccgtcgcg gatgtacacg atttcgaccg ttttaccgga cggagtagca gtgagcaacc
      841 gcatcatctc gctttcgtcc acggttgcat ggccatcgaa agcagtgatg atgtcgcctc
      901 ccaccagtcc agctttgtcg gccgggccat caggtggcca cacatcttcg aacgtgacgc
      961 cacccgtcgc atcttcaaat tcattaatgc ccaaatatga ttggggcggg gtccgaatag
     1021 tctgaggagg agcgacattc ttgcgcagcg cggtcataac accgccgatt gcgaaaagca
     1081 gcgcgatgcc gatcagaatc catgtcattc cgccaacccg acgccttcgt ttggtaacgg
     1141 gcgggccggc ttgaggccca gtgggtgatg aaggagaatt attcaagctt tgctgcggct
     1201 gcattacttt ttgaagctta ccacggcgca aaagtacgcg cgcctgcgac gctgatgcaa
     1261 ttgtaagaat atttcggtag tgatgctcgg cggctaaccg cgaccgatcg tcacagggat
     1321 tttcagggtc tcgccacctc gaatcacggt gacctctacg ggagttttcg gcatggctct
     1381 tcgcacgcga gacagaagct ctccgccggt acgaatcggc acgcggtcaa acgtcgtaat
     1441 gatgtcgccg tctttcaatc cgaacaaatc ggccgggcca tttcgctcaa tatagtcgag
     1501 ccgcacgccg taagtcttgg tggccggctc cgcaattttt gtcacgcgat catcatcaaa
     1561 tccaaaatag cctcgcccct cgggtcggtc gccggcaatg cgtcggagtt ggtttacctc
     1621 tgcctcggct atcgtggtca actgcgttgt ctttgtctcg ccgtcgcgaa tgtaggtaac
     1681 ttcaacggtc ttcccaatcg gcgtctgacg cagcaggtta atcatctcat cttcatccgt
     1741 ggccgcgcgc ccgtcgaaag ttacaatgat gtcgccgccg accagaccag ctagatccgc
     1801 gggactgccg ggcggttcga cgttgtcgaa cgtaacaccg cccgtcgcgt cttcgaatcc
     1861 atcgacgccg aagtgtgaac gcggggctga aaccgtcccg ctgaacggcg gacggctgac
     1921 gctcctgcgc acagcggtca acacgccgcc caacacgaac agcgaagcga tgaggatgat
     1981 gatccacgcc atgccgctga tccttcgctt tttcttgtag gggatacccg cgccgggctg
     2041 ctgagcgatt ccccctgcgt aattcggcat gaagggggtt ccttgcggcc cggtggccgg
     2101 cgcgtgtggt aagcgcacgg tctcggtgta ctcggccgag ccttcgccca accgatgccc
     2161 gcaggcgcga caaaaccgca tgccctgggg catgggggcc ccacattcag agcagacaac
     2221 ccgtccagtg tcaccggtcc ggcctgacgg attgttcaag ttgttctgag gctgcattga
     2281 ttcctgggtt tagtgaaccg caaaattata cgactacttg gatggaatgg ttgcgtcgaa
     2341 aatttcaggt gctccagctc gcgaaacacc caccgtttcc ggattcgaac cagagcgagt
     2401 agtattcaat aaacctactc gtaaaacaat ggaagtaacc aaagccctcg cggcgctgca
     2461 gccgctttac cgcaaaggca atattgaaat tgttacgcgt gacggcg
//
LOCUS       DATDBY010000386         2267 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2671889, whole genome shotgun sequence.
ACCESSION   DATDBY010000386 DATDBY010000000
VERSION     DATDBY010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2671889"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..801)
                     /locus_tag="VIT19_07185"
     CDS             complement(<1..801)
                     /locus_tag="VIT19_07185"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5838802.1"
                     /translation="MKILRIIARLNVGGPARHVVWLTDGLRANGYDTVLVTGVVPSGE
                     DDMTYFAQAAGVTPHVIPQMSREISLRDALASWKLFRLMLRERPDLVHTHTAKAGTVG
                     RVAGLLYRWLTPAALLGKPRACRFVHTYHGHVFHSYYGPAKTKLFLTIERALARLVTD
                     RIIVVSEQQRREIHEDFRVGTPEQYAVVPLGLDLSLFSDWQAKRSRLREELSAADDEL
                     LIGIVGRLTEIKHHAMFLRAAARVKELAGTSSDQRRMRFVIIGDGSLRG"
     gene            complement(966..1472)
                     /locus_tag="VIT19_07190"
     CDS             complement(966..1472)
                     /locus_tag="VIT19_07190"
                     /inference="COORDINATES: protein motif:HMM:NF013103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HEY5838803.1"
                     /translation="MQQKPAPNSETFHQSNINDVIVRPLRRFDDRRGWLSELFRHDEL
                     PAEFFPVMSYISSTRPGVTRGPHEHVDQADLFCFIGPSNFKLRVWDNRPDSSTYQAVM
                     TLLVGQDNPQAVVIPKGVVHAYQNVGETDGIVINCPNRLYMGDHRQETIDEIRHEDDP
                     NTIFRMDD"
     gene            complement(1444..2208)
                     /locus_tag="VIT19_07195"
     CDS             complement(1444..2208)
                     /locus_tag="VIT19_07195"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEY5838804.1"
                     /translation="MKGIVLAGGLGTRLRPLTSVTNKHLLPVFNQPMIYFPIQTLVNA
                     GITDIMIVTGGNSAGDFLKLLGNGKAFGLKHLNYTYQEGEGGIAAALSLVEHFAGEDP
                     ICVVLGDNIIQGNIRPAVDAYREQHGGAKILLKKVTDPQRFGVPELSERRVLRIEEKP
                     KQPKSEYAVIGIYMYDAAVFEIIRTLKPSGRGELEITDVNNAYIARGAMTWDELEGWW
                     TDAGTFESLLHASNLVAETGANNMELTHAAEAGAKL"
BASE COUNT          459 a          642 c          653 g          513 t
ORIGIN      
        1 tccgcgcagg ctgccatcgc cgatgatgac gaagcgcatg cgccgctgat ctgatgaagt
       61 gccggcgagt tccttcaccc gcgctgccgc gcgcaagaac atcgcgtggt gcttgatttc
      121 agtgagccgg ccgacgatcc ctatgagtag ttcgtcatcc gccgcgctta attcttcccg
      181 caaacggctg cgcttcgctt gccagtcgga gaatagactt aggtcgaggc ccagcggaac
      241 gaccgcgtat tgctcaggcg tcccgaccct gaaatcttcg tgtatttcgc gtcgttgctg
      301 ctcgctcacg acgatgattc gatcggtgac cagccgcgcc agggcgcgct caattgtgag
      361 aaagagtttt gtctttgccg gcccgtagta gctgtgaaaa acgtggccgt gatacgtgtg
      421 gacaaagcgg caagcgcgcg gttttccaag cagcgccgcc ggcgtgagcc aacgatagag
      481 cagtcccgcg acccggccga cggttcctgc tttcgctgtg tgcgtgtgaa cgaggtcggg
      541 ccgctcgcgc aacatcagac ggaaaagttt ccagctcgcc agcgcgtcgc gcagagaaat
      601 ctcgcgactc atttgcggaa tcacgtgcgg ggtcacgccg gcggcctgcg cgaagtaggt
      661 catgtcgtct tcacctgacg ggaccacccc ggtcacgagc accgtgtcgt aaccgtttgc
      721 gcgcaagccg tcagtcaacc agacaacgtg ccgcgcgggc cctcctacgt tcagacgcgc
      781 aatgattcgg agaatcttca agacagtaag cagtaggcag taggcagtag gcagtgagtg
      841 gcaatcgtca tgatgagtat tccgcggtga taatctcggg cggtcgatac gaacgtaaga
      901 ggccgagctg cgagttgcaa gcccggcccc gcgttacgtc ggttctgctc actgctcact
      961 gctcactagt cgtccatgcg gaaaattgtg ttcggatcat cctcatgtct gatctcatca
     1021 attgtttcct ggcggtggtc gcccatgtaa aggcggttcg gacaattaat gacgatgccg
     1081 tccgtctctc caacgttttg atatgcgtgg acgacgccct tcgggatgac gacagcctga
     1141 ggattgtcct gccccacaag caatgtcatc actgcctgat acgttgagga atcaggacga
     1201 ttgtcccaca cgcgtaattt gaagttggac ggtccgatga agcaaaacaa gtctgcctga
     1261 tcgacatgct cgtgcggccc gcgcgtcacg ccgggcctgg tcgaagagat gtaggacatc
     1321 acgggaaaga actcagccgg caattcgtca tgacgaaaaa gttcgctcaa ccagccgcgc
     1381 cggtcgtcga acctgcgaag cggccgaacg ataacgtcgt tgatattgct ttgatggaaa
     1441 gtttcagagt ttggcgccgg cttctgctgc atgtgttagt tccatgttgt tggcaccggt
     1501 ttcggcgaca agattcgagg cgtgcaagag actttcaaaa gttccggcgt cggtccacca
     1561 gccttccagt tcatcccagg tcattgcgcc gcgcgcgatg tatgcgttgt tcacgtcggt
     1621 tatctcgagt tcgccgcgac cggaaggttt aagtgtacga atgatttcaa acaccgcggc
     1681 gtcgtacatg taaatgccaa tgacggcgta ctcggatttc ggctgcttcg gtttttcttc
     1741 aatgcgaagc acgcgccgct cgcttaactc cggcacgccg aaacgttgcg gatcggtaac
     1801 cttcttcagg agaattttgg ccccgccgtg ttgttcccga tacgcatcga ccgccgggcg
     1861 aatgtttccc tggataatgt tgtcgccgag aaccacgcaa atcggatctt cgcccgcgaa
     1921 atgttcgacc agcgagagcg ccgctgcgat gccgccttcg ccctcctggt aagtgtagtt
     1981 caggtgtttc aatccaaacg ccttgccgtt gccgagcagc ttcaggaaat cgccggcgga
     2041 attcccgccc gtgacgatca ttatgtctgt gatgcccgca ttcaccaggg tttggatcgg
     2101 aaagtagatc atcggctggt tgaaaacggg cagcaggtgt ttgttggtta ctgaagttag
     2161 gggacgcaac cgcgtgccta gtccgccagc cagtacgatg cccttcaaga tgtgtctttt
     2221 cctccttagc gctgcgcaaa tacttttagt gaatcaccca ttcgggt
//
LOCUS       DATDBY010000387         3660 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1637646, whole genome shotgun sequence.
ACCESSION   DATDBY010000387 DATDBY010000000
VERSION     DATDBY010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3660
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1637646"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..261
                     /locus_tag="VIT19_07200"
     CDS             <1..261
                     /locus_tag="VIT19_07200"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HEY5838805.1"
                     /translation="LLPSFPGLGPQQQALDHGVSFSGCTVHFVDETLDGGPIVAQRVV
                     PVLEGDTVETLSARILEQEHQLYPEAVAQVLANNHFSQAANS"
     gene            264..1088
                     /locus_tag="VIT19_07205"
     CDS             264..1088
                     /locus_tag="VIT19_07205"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEY5838806.1"
                     /translation="MSAVVTTDETLVIETPERVPLHFALASIGNRFIACAIDHTIQMV
                     ALFVMVIFFMIIAGFSDFGDRVTSAPSWVKAVLIIFAFLLISGYFAVFEWIWRGQTPG
                     KRWLKLRVIREDGRPIGFFESAVRNLLRNFDMLPTPPFYSVGLVSVFVTERDQRVGDL
                     VAGTVVVREREAEAPAFTEVFASPVSDQALRRAWKAVPFTADVNLLTEAEIQVVESFL
                     RRRWDLKDYPRQWMAWRVSMPILFKLRPQYDLPTFTYEGFLEELLHRYREKHRFID"
     gene            complement(1112..2449)
                     /locus_tag="VIT19_07210"
     CDS             complement(1112..2449)
                     /locus_tag="VIT19_07210"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEY5838807.1"
                     /translation="MNSKYLLSTRFLFRKSLLWTIVCAAAAFAPSLSLAQTIPFQRER
                     SREILKVIKSDVEKNYYDPTFHGVDLTAVFTEADALLKKAESAGQMYGIIARALLQLN
                     DSHTYFIPPSRVARIERGWTIQAIGDKVYIASVKPGSDADRKGVVPGDLVVSVDEMNP
                     TRENLWMIQYLFVLRPQPSTLFELENPDGEKRKLEIEAKVSQGRKITNLADYDDTLRL
                     QMEEERDARLNRHRYIKIGDVFFWKMPAFDLPPDKVDEMIGKVKESKTLILDLRGNGG
                     GAEDTLLRMIGNLFDRDVILGDLKQRKEKKTMLAKSRGGSAYKGQVIVLTDSGSGSSS
                     ELLARVVQMEKRGTVIGDRSAGAVMRGRFSSRSSGVETMIFYGVSVTDADLIMTDGRS
                     LERVGVMPDELILPTPHELRKRWDPVLARAAQLAGLQVSSEKASTLFPVEWRQ"
     gene            2752..>3660
                     /locus_tag="VIT19_07215"
     CDS             2752..>3660
                     /locus_tag="VIT19_07215"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEY5838808.1"
                     /translation="MAQDVFILGGKRTPMGEYVGALKDISAIDLGATASKAALETTGV
                     AAEEIDHAIFGNALQTSGDAIYGARHVALKAGVPFDRPALTVNRLCGSGIQSIVSGAQ
                     MIQLGEAQTCLVGGMESMSQAPHVIRGARSGFGLGQGKLEDSLMVALLDTYCNTPMAG
                     TAEKLARKFEISREEQDKYALRSQQAAKRALDEGFFADEITPVEVKSRKGTTLFDRDD
                     HLRPDTTMEGLAKLRPAFAKDGFVTAGNASGIVDGAAALVIAGESYVKAHDSKPLGRI
                     VSWAYAGVEPEIMGIGPVPASLQALEK"
BASE COUNT          778 a         1014 c         1023 g          845 t
ORIGIN      
        1 ctcttgccgt cttttcccgg cctcgggccg cagcaacagg cgctcgatca cggcgtgagc
       61 ttcagcggct gcacggtgca ctttgttgac gagacattgg acggtgggcc gatcgtcgcg
      121 caacgcgttg tgccggtatt agaaggcgac acggtcgaaa cattgtcggc gcggatactt
      181 gagcaggagc accagctcta tccggaagca gttgcgcaag tgctggcgaa caaccatttc
      241 agtcaagctg ctaattcgta accatgtccg cggtcgtcac cacagacgaa acactcgtca
      301 ttgaaacgcc tgagcgcgtg ccccttcact ttgcgctcgc gtcgatcggc aatcgcttta
      361 tcgcctgcgc catcgaccac acgattcaaa tggtggcgtt gtttgtcatg gtgatcttct
      421 tcatgatcat cgcgggcttt tccgatttcg gcgaccgcgt gacgagtgcg cccagttggg
      481 tcaaggcggt gctgatcatc ttcgcctttc ttctgatctc cgggtacttt gccgtattcg
      541 aatggatttg gcgtggccaa acgccgggca agcgttggct gaagctgcgc gtgattcgcg
      601 aagacggccg gccgattggc ttctttgaat cggcagtcag aaacctcttg cgcaactttg
      661 acatgctgcc gacgccgccg ttttattcgg tgggactggt ctcggtgttt gtgactgagc
      721 gcgatcagcg cgtcggcgat ctggttgccg gcacggtggt cgtgcgtgaa cgcgaagccg
      781 aagcgcccgc cttcaccgaa gtgttcgctt cgcccgtttc cgatcaggct ctgcggcgcg
      841 cctggaaggc tgtaccattc acggcggacg taaatttgct aactgaagct gaaattcaag
      901 tggttgagag ttttttgcgc cgccgatggg acttgaagga ctatccgcga cagtggatgg
      961 cctggcgcgt ctcgatgccg attcttttta agctacgccc gcaatacgat cttccgacgt
     1021 tcacctacga aggttttctc gaagagctac tgcatcgcta tcgtgagaag caccgattta
     1081 ttgattagag ctcccattct taaggaacgt ttcattggcg ccattcaacg ggaaatagag
     1141 tgctcgcctt ttccgacgaa acttgtagcc ccgccagttg ggcggctcgg gccaaaaccg
     1201 gatcccatcg tttcctcagc tcgtgcggtg tcggcagaat tagttcgtcc ggcatcacgc
     1261 ccacgcgctc caggctgcgg ccgtcggtca tgatcaagtc cgcatcagtt acgctcaccc
     1321 cataaaagat cattgtctcg acgcctgacg aacgcgaaga gaatctaccg cgcatgactg
     1381 cgccggcgga acggtctcca ataacggtcc cgcgtttttc catctgcaca acccgcgcca
     1441 gcaattcgga agaagacccc gatccactat cagtcagaac tatgacttgt cccttgtagg
     1501 ctgagcctcc gcgggatttg gcaagcatgg ttttcttctc cttgcgctgt ttcaagtcac
     1561 cgagaataac gtctcgatcg aaaaggtttc caatcatccg taaaagcgta tcttccgcac
     1621 ccccaccgtt gccgcgcaaa tccaaaatca gggtcttgct ttccttaact ttgccgatca
     1681 tctcatcgac tttgtcaggg gggagatcga aggcgggcat cttccaaaag aacacgtcgc
     1741 cgattttgat atatcgatgg cgattcagac gggcgtctct ttcttcttcc atctgcaagc
     1801 gcaacgtgtc gtcgtaatct gcgagattgg taatctttct cccttgggaa accttggctt
     1861 cgatctccaa ctttcgcttt tccccgtcgg ggttttctaa ttcaaaaagc gtggacggtt
     1921 ggggccggag cacaaacaga tactggatca tccagagatt ttcgcgcgtg gggttcatct
     1981 cgtcgaccga gacgaccaag tcgcccggta ccacaccctt ccgatcagca tcgctaccgg
     2041 gctttaccga ggcgatataa accttgtcgc cgatggcttg tatggtccag ccgcgctcaa
     2101 tcctggcgac acgcgaaggc ggtataaaat atgtgtgtga atcgttgagt tgcagcagtg
     2161 cgcgggcaat gatgccgtac atttgtcccg ccgattccgc ctttttaagt aaggcgtctg
     2221 cttcagtgaa aaccgcagtg agatcgacgc cgtgaaacgt cgggtcataa taattctttt
     2281 cgacatcgct cttgattact ttgaggatct cgcggctgcg ttcacgttga aaaggaatcg
     2341 tctgtgccaa gctcagagat ggagcgaagg cagcagccgc gcagacaatg gtccacaaca
     2401 aagatttgcg gaacaagaaa cgagtcgaca gaagatactt ggaattcatg aggggtacct
     2461 cgaaatcaaa ctttctaaag agcgcgtcgg gacggccctc aaggtaagaa ccgtcgcgca
     2521 aactaacaca gatctcgaat atcagtaaag tttctcagcg ccgggtagtg ggtcagtttg
     2581 aggtggcacg cgcatcttgc gcgtgatttc acgggcggga cgcccgtacc actctttcaa
     2641 actgacccac tacccagcgc ggcctttttt tgacgttcgg gtaaatcgtt tgctaggctt
     2701 ggcgatttcc cggaattgaa ttcttcaagc aaagagataa gggattacta aatggctcaa
     2761 gatgttttca ttcttggcgg taaacgcacg cccatgggcg agtatgtcgg cgccttgaaa
     2821 gatatttcgg caatcgatct cggcgccact gcgtcgaaag cggccctcga aaccacgggt
     2881 gtcgccgcgg aagaaatcga tcacgcaatc tttggtaacg cgctgcaaac ttccggcgat
     2941 gcaatctacg gtgctcgtca cgttgctcta aaagcgggcg tgccattcga tcggcccgcg
     3001 ttaacggtca atcgtttgtg cggcagcggc attcaatcga tcgtttcagg cgcgcagatg
     3061 attcaactcg gcgaagcgca aacatgcctc gtcggcggca tggagtccat gtcgcaggcg
     3121 cctcacgtga ttcgcggcgc gcgctcaggc tttgggttgg gtcagggaaa actggaagac
     3181 agcttgatgg tggcgctgct cgacacgtac tgcaatacgc cgatggccgg tacggcggaa
     3241 aagctcgccc gcaagttcga gatttcacgt gaagaacagg acaagtacgc gctccgttca
     3301 cagcaggccg cgaagcgcgc cctcgacgaa ggtttcttcg ccgatgaaat tacgccggtt
     3361 gaggtgaaga gccgaaaagg gacaacgcta ttcgatcgcg acgatcacct gcgtcccgac
     3421 acgacgatgg aggggcttgc gaagctcagg cctgcgttcg cgaaagacgg tttcgtcacc
     3481 gccggcaacg catcgggaat cgtcgatggt gcggccgcgc tggtcatcgc cggcgaatcg
     3541 tacgtcaaag cgcacgactc gaagccgctc ggtcgcatcg ttagttgggc gtatgccggc
     3601 gttgaacctg aaatcatggg catcggcccg gtgcccgcgt cgcttcaggc actggagaaa
//
LOCUS       DATDBY010000388         2471 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_418957, whole genome shotgun sequence.
ACCESSION   DATDBY010000388 DATDBY010000000
VERSION     DATDBY010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2471
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418957"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..743)
                     /locus_tag="VIT19_07220"
     CDS             complement(<1..743)
                     /locus_tag="VIT19_07220"
                     /inference="COORDINATES: protein motif:HMM:NF025684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4384 domain-containing protein"
                     /protein_id="HEY5838809.1"
                     /translation="MRIRLLIGLSAVLAFGTGVFVASAQQDEGVRGAFLESRPKTTDL
                     KGPSRRHRRRPAKINTNPNPTPAVNPSASTNTNTTTTAVTNRPPSRKTQPAIGLGYTI
                     FMREPSGRSIRVEPTREFRNGDRIRIALEPNTDGYLYIFNSENGASPRMIFPDARLDG
                     GENWIEAHVPVEVPSSEEAEERLRWFEFYGDPGTERVFIVVTREPLSAVPTADELVAF
                     CGLNKDKCPWQAPADVWQQIEKATTAQVKV"
     gene            complement(767..>2471)
                     /locus_tag="VIT19_07225"
     CDS             complement(767..>2471)
                     /locus_tag="VIT19_07225"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5838810.1"
                     /translation="RFQREGQAARRFRHPNAVTVYDLRTSSDGMIYLVMEYVEGTTLD
                     AELKKRGRFSPAEALATLKPVISVLNAAHAMGVVHRDLKPENIMIGRAGTGGEPMVKL
                     LDLGIAKLREVAGAEKTGSTNLTVAGQMLGTPYYMSPEQWGELPEDGSSEIDGRADIY
                     SLGVVFYEIIAGKRPFSGVTILELRKQHVTLTPQPLHEVASNVPVNFSKALMRAMAKD
                     RGDRQTTAGEFETELEASLSGATAATIMLSGSSEAAAREESGVTIADRPTPTVSDSGA
                     MTLLEGSPAHPVVSEASTMPTVVVGAEELTARQAAKPVESSQPMPRAQVAAPARTRRS
                     PLIFAGAAVFVFLILVGVGAYAFMKFKGTNTGTNAGATTPSGGSDLTVPMHEVARYWI
                     EVDTKNRDAATRAGETVTMQSGESFKFHFSPNESGYLYIVGPGPNNVPAAFLTYYGKQ
                     PDLAAGVNSVASGRDFVFPADTADRTNWITLDRNAGTDEFTLVFSREPLISPAFFAAP
                     APHVLTPADIKEWENFQSQAKTSTIEVVKGGASPQTAVKMPQNETEKASVVFRVRIEH
                     K"
BASE COUNT          478 a          754 c          687 g          552 t
ORIGIN      
        1 accttgacct gtgccgtcgt cgctttttcg atttgctgcc acacgtcggc cggcgcttgc
       61 cacggacatt tgtctttgtt aagaccgcaa aacgccacga gctcgtcggc cgtgggcacg
      121 gcgctgagcg gctcgcgcgt caccacaatg aaaacccgct cagtgcccgg gtcaccgtag
      181 aactcaaacc aacgcaagcg ctcttccgct tcttcacttg aaggcacttc aacagggacg
      241 tgcgcttcga tccaattttc gccgccgtcg aggcgcgcat ccgggaaaat catgcgcggc
      301 gacgcgccgt tctcgctgtt aaagatgtaa aggtacccat cggtgtttgg ctcaagagca
      361 atcctgatcc ggtcgccatt gcggaactca cgcgtcggtt caacgcgaat ggagcgtcca
      421 ctcggctcgc gcataaagat tgtgtaaccc aagccaattg caggttgagt ttttcgcgac
      481 ggaggccggt tcgtcaccgc cgttgtcgtc gtgtttgtat tagtggacgc ggacgggttc
      541 acagccgggg ttgggtttgg gttcgtgttt atcttcgcag gccggcgacg atgacgtcgc
      601 gacgggcctt tcaggtcggt tgtcttcggg cggctctcga gaaacgcgcc acgcacaccc
      661 tcgtcctgct gagcgctggc cacaaaaact cctgtcccaa aagccaacac cgccgataac
      721 ccaatcaaca atctaattct catgaccaac tcctcaaata tcgggctcat ttgtgttcga
      781 tgcgaactct aaacacgacg gacgcctttt cggtctcgtt ttgcggcatc tttaccgcag
      841 tttgaggtga agcaccgcct ttgaccacct ctattgtcga cgtcttagcc tgcgactgga
      901 aattctccca ttctttgata tcggccggcg tcagcacatg cggagcaggc gcagcgaaaa
      961 aagccggcga gatcagcggc tcccgtgaaa acacaagagt gaattcatcc gtgcccgcgt
     1021 tgcgatccag agtgatccaa ttggttctgt ccgctgtatc tgccggaaag acgaaatctc
     1081 ttccgctcgc aactgaattc accccggccg ccaaatctgg ctgtttcccg taatacgtca
     1141 agaatgctgc tggtacgttg ttgggtccgg ggccaacgat gtagagatag ccactctcgt
     1201 tcggcgaaaa atgaaacttg aaagattcgc cggattgcat tgtgactgtt tccccggcgc
     1261 gcgtcgccgc atcgcgattc tttgtatcga cttcgatcca gtatcgcgcg acttcgtgca
     1321 tcggcaccgt caaatccgaa ccaccggacg gagttgtcgc gccggcgttt gtcccggtgt
     1381 tggtcccttt gaacttcatg aacgcgtaag cccctacgcc aaccaggatc aggaagacga
     1441 agactgcggc tccggcaaag atgagcggag agcggcgcgt tcgcgcgggc gcggcaactt
     1501 gcgcacgcgg cattggctgt gatgactcga cgggttttgc ggcctgccgc gcagttagtt
     1561 cctccgcacc caccacaacc gtcggcatgg ttgacgcttc gcttacgaca ggatgagcag
     1621 gactgccttc gagaagcgtc attgcgccgg aatcactcac ggtcggtgtc ggccgatcgg
     1681 caattgtgac cccactttcc tcgcgggccg ccgcttcgct cgagccggac aacataatcg
     1741 tcgcagcggt cgcgccactc agcgaggctt ccaattccgt ctcaaattct ccggcagtcg
     1801 tttgtctgtc gccgcgatcc ttggccatcg cgcgcatgag cgctttgctg aaattgactg
     1861 gaacattcga cgccacttcg tgaagcggct ggggcgtcaa cgtgacgtgc tgctttctca
     1921 attccaaaat tgtgacgcca ctaaatggtc gcttgccggc gataatttcg tagaacacga
     1981 cgccgagact gtagatgtcc gcgcgcccat cgatttccga gctgccgtct tccggcaact
     2041 cgccccattg ctcgggagac atgtagtacg gcgtgccgag catttgcccg gcgacggtga
     2101 gattcgtgct gccggttttc tcagcgccgg ccacctcgcg cagctttgcg atgcccagat
     2161 cgaggagctt taccatcggc tcgccgccgg tgccggcacg acctatcatg atgttttcgg
     2221 gtttcagatc gcgatgcacg acgcccatcg catgagcagc gttcagcacg ctgatgaccg
     2281 gcttcaaggt cgccaacgct tcagcgggtg aaaaccttcc gcgctttttc agttcggcgt
     2341 cgagcgtcgt gccctcaacg tactccatca ccaggtagat catcccgtcg ctcgacgtgc
     2401 gcagatcgta aaccgtgacg gcgttcggat gacgaaagcg acgtgccgcc tggccttcgc
     2461 gttgaaagcg g
//
LOCUS       DATDBY010000389         2750 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2872684, whole genome shotgun sequence.
ACCESSION   DATDBY010000389 DATDBY010000000
VERSION     DATDBY010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2872684"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..293
                     /locus_tag="VIT19_07230"
     CDS             <1..293
                     /locus_tag="VIT19_07230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838811.1"
                     /translation="LLAARKTGYGLQRFVSSGWVRGTVTGIGLLNIAMGLWELFHFRK
                     TVHALDGGGSTVESSPKPRSQAVAPNEIRPVQTDPLSDYPRRKHGSDDAQES"
     gene            211..870
                     /locus_tag="VIT19_07235"
     CDS             211..870
                     /locus_tag="VIT19_07235"
                     /inference="COORDINATES: protein motif:HMM:NF014622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEY5838812.1"
                     /translation="MRFDLSKPIRYLITRGASTEATTPKSPEFRHILAQVSAAVAAGL
                     ELIQLREKRLTTRVLFELSEQSAALTLGSETRLLVNDRADVAAAAGADGVHLTTQSID
                     AATIRRTFGKDFLIGVSTHSLAEAEVAKEVGADFAVFGPVFATPSKENYGLPAGLATL
                     EGVAKQLAPFPVLALGGIDVMNARECLRAGASGVAGISLFEDVERLDEIVGTCVSESE
                     G"
     gene            1004..1789
                     /gene="thiD"
                     /locus_tag="VIT19_07240"
     CDS             1004..1789
                     /gene="thiD"
                     /locus_tag="VIT19_07240"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEY5838813.1"
                     /translation="MVLTIAGFDPSGGAGIIADIRTIESFGCTAVAAITSVTFQNAEK
                     FFGAKHQSAESVREQVEAITGVTSIAAIKIGMLPTAEVVREVARLIRENNLPAPVIDP
                     VLESTSGGKLMEDDAFEVFVTELLPRARVVTPNVPEAEKLAGMNIRDESDMRQATARI
                     RELGVPAVLIKGGHLEEQRSEVRDQKSDSTERQAIDLLDDDGQVTVFRSEWIEAPNVR
                     GTGCMLSSAIAAHFAQGFTLHESVPEARRYVLSALASRQNFAE"
     gene            complement(1794..2444)
                     /locus_tag="VIT19_07245"
     CDS             complement(1794..2444)
                     /locus_tag="VIT19_07245"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HEY5838814.1"
                     /translation="MPTIFISHSSANRQFVERELVTFLNSHGLRTWYSKEQISTGIHW
                     ERAIREGLHSSDWFIVVVSQESLKSEWVRAEVDWAVEHRWERIVPLLIEHADASELHL
                     RLRLIQHVRWFESNEAAKSQMLRIWDVNRPDGNSGIPPASQIQFDDYLYPRPKNWFCL
                     FCGWQCTEDFNDYICKVCSRLRPFAGGSATMRNCPRCEGWSLGVAQFCEWCGTKLA"
     gene            complement(2480..>2750)
                     /locus_tag="VIT19_07250"
     CDS             complement(2480..>2750)
                     /locus_tag="VIT19_07250"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY5838815.1"
                     /translation="KFDDEINPGSEVYKRGYKAGTVAMANAGPNTNGSQFFIMHVDYP
                     LPPSYSIFGRVTEGQDVVNAIATTKTASGDRPVEEVRMEKVTIEG"
BASE COUNT          597 a          775 c          794 g          584 t
ORIGIN      
        1 tgctgctggc tgcgcgcaag accggttacg gcctgcaacg tttcgtgtct tcagggtggg
       61 tgcgcggaac cgtcacgggc atcggccttt tgaacatcgc gatgggactt tgggagctgt
      121 ttcattttcg caagaccgta cacgcgctgg acggcggcgg ctcaactgtg gaaagctcgc
      181 ccaaaccgcg gtcacaagcc gttgcaccga atgagattcg acctgtccaa accgatccgc
      241 tatctgatta cccgcggcgc aagcacggaa gcgacgacgc ccaagagtcc tgagttccgg
      301 cacatcctcg cccaagtgtc cgctgcggtt gcggccggcc tcgaactaat tcaactgaga
      361 gaaaagcgtc tgaccacgcg tgttttgttt gagctgagtg agcagagcgc cgcgctgaca
      421 ctcggttcgg aaacgcgtct gttagtaaat gatcgcgctg acgttgccgc tgcggccggc
      481 gctgatggcg ttcatttgac gacgcagtca atcgacgctg cgacaatccg ccgcacgttc
      541 gggaaagatt tcctgatcgg tgtgtcaacg cactcgcttg ccgaggctga ggttgcgaaa
      601 gaagttggcg cagactttgc cgtcttcggt ccggtgttcg cgacaccgtc gaaagaaaac
      661 tacggcctgc cggccggact ggcgacgttg gaaggcgtag cgaagcagct ggcgccattt
      721 cctgtactgg cgctcggtgg aattgacgtc atgaatgcgc gcgagtgttt gcgagccggc
      781 gcgagcggcg ttgcaggaat tagtcttttt gaagacgtgg aacggctgga cgaaatcgta
      841 ggaacttgcg tgtccgaatc tgagggatga tcaacaagca cgagacaatc tgcgctggtt
      901 ctccccctct ccgctcgcgg agagggggct ggggggagag gttgtgagcg gcctaacccc
      961 accccttacc cctccccgct tgcggggagg ggaattcaaa cctgtggtcc tgacgatcgc
     1021 cgggttcgat ccgtccggcg gagccggaat cattgccgac atacgcacga ttgaatcgtt
     1081 cggctgcaca gccgtcgccg caatcacctc agtgactttc caaaatgccg agaagttctt
     1141 cggtgcgaaa catcaatccg ctgagtctgt gcgcgaacag gttgaagcga tcacgggcgt
     1201 gacgagcatt gcggccatta aaatcgggat gcttccgacg gccgaagttg tgcgcgaagt
     1261 ggctcggctc attcgcgaaa acaatctgcc cgcgcccgtc atagatccgg tgttggaatc
     1321 gacgagtggc ggcaagttaa tggaagacga tgcttttgaa gtgttcgtga ctgaactatt
     1381 gccacgggcg agagtggtca cgccgaacgt cccggaggca gaaaagctcg ccggtatgaa
     1441 cattcgcgat gaaagcgaca tgcggcaagc gacggcgcgg attcgtgaac tcggcgtccc
     1501 ggcggtactg atcaaaggtg ggcacttgga agagcagagg tcagaggtca gagatcagaa
     1561 gtcagacagc actgagcgac aagctatcga cctcctcgac gacgatggtc aggtgacagt
     1621 ttttcgaagc gaatggattg aagcgccgaa cgttcgtgga actggttgca tgctgtcgtc
     1681 agccatcgca gcgcacttcg cgcaaggatt cacgcttcac gagtcagttc ccgaagcccg
     1741 ccgttatgtt ttgtcggctc tagccagcag acagaacttc gctgaataaa tttctaagcc
     1801 aactttgtcc cgcaccattc gcaaaattgc gcgacgccca ggctccatcc ttcgcacctt
     1861 gggcaatttc tcatcgtagc cgagccgccg gcgaacggac gcaatcgtga acagaccttg
     1921 cagatatagt cattgaagtc ctcggtacac tgccatccac agaacaaaca gaaccagttc
     1981 ttcggtctcg ggtaaaggta gtcgtcgaac tgtatctggg acgccggagg gatgcccgaa
     2041 ttaccgtccg gtctgttaac gtcccagatc cttaacatct gggacttggc agcttcattt
     2101 gattcaaacc atctaacgtg ttgaatgagc cgcagtcgta agtgcaactc gctggcatcg
     2161 gcgtgctcga ttaacagcgg cacaatccgc tcccagcgat gttcgacggc ccaatcaacc
     2221 tccgcacgca cccactctga tttaagcgat tcttgtgaaa cgacgacgat gaaccagtcc
     2281 gaagaatgca gaccttcgcg gatggcgcgc tcccaatgaa tgcccgtcga gatctgttcc
     2341 tttgagtacc aggtgcgcag tccatgtgag ttgaggaacg ttacgagctc ccgctcaaca
     2401 aactgccgat ttgcggaaga atggcttatg aagattgttg gcatgatgtc gcgacatcac
     2461 ctcgggccca acagccatgc taaccctcga tcgtcacttt ctccatccgc acttcctcaa
     2521 ccggtcgatc gcctgaggcg gtcttcgtcg tcgcaatcgc gttcaccaca tcctgacctt
     2581 ccgtcacgcg gccaaagatc gaatagctcg gcggcagcgg ataatcaacg tgcatgatga
     2641 agaactgcga gccgttggtg ttcgggccgg cgttagccat cgccaccgtc ccggctttgt
     2701 agccgcgctt gtaaacttct gagcccggat tgatttcatc atcgaacttt
//
LOCUS       DATDBY010000390        12744 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_18795, whole genome shotgun sequence.
ACCESSION   DATDBY010000390 DATDBY010000000
VERSION     DATDBY010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 12744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12744
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18795"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1778)
                     /locus_tag="VIT19_07255"
     CDS             complement(<1..1778)
                     /locus_tag="VIT19_07255"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEY5838816.1"
                     /translation="MFERLRRIRLLYVVLAVLLLVGLLPLVVAGTLVSRRSAEELRAI
                     EGRYQAQLVQGKARQIELYGQRYRDVVSGLARGFEFAGGVHSLTNAGSDVRLQRALQD
                     DPNLIALAICPVKGEIHRAFQPDVIRKEEVNQRVSEVLARMNGRGVIVGRPQIIRSGQ
                     EMGLTIAAPVMDGDQIVAAVVAVVSFQEAFKTVQSSSKSARELLDAGLPVVFVVDQNG
                     KAVAHPDVAIAFAERPMTDLKVVQDWLESGSQVQSALSPFSLERDGKSVSMLGSYATA
                     ELDTNSLLAVIAIQDESAALASVRDMRNQVFFVSLLAAMLALVCGFYFAEKLTRPVRE
                     LAAGATRIAGGDFSQRVKVLGRTELGELGSSFNQMTDRLERFVLDLQRSAEENRELFL
                     GTVKALAAAIDGKDPYTRGHSERVSRFSVATAEGLGLDEGEVEKIRISALLHDVGKIG
                     IDDRILKKPAALDDQEFEIMKTHPQKGYKIMSQIPAMREFLPGMYMHHEMINGQGYPQ
                     GLKGDEIPMQARIVSVADTFDAMTTERPYQAAMELEAALTRLKSFVGTRYDARVVAAF
                     IAACEAGKIRPGVTRLKRNQSDYTNT"
     gene            2090..2668
                     /locus_tag="VIT19_07260"
     CDS             2090..2668
                     /locus_tag="VIT19_07260"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5838817.1"
                     /translation="METVTTDEQMVERALSGDPEAFGEIVRRWERRIFALSFGMLGRE
                     EDARDATQETFLSAFRNLRGFRGEAKVSSWLHRIAVNQCITRQRRAKVRSETPLEDEA
                     EKNAAVFALPAEVSPARAAEHGQISVAVRKAVIALPPDLRQVVVMKEFEDLTFQEISD
                     VLGVPLSTVKSRLYTALRQLQMRLQKFGQAKA"
     gene            2671..3423
                     /locus_tag="VIT19_07265"
     CDS             2671..3423
                     /locus_tag="VIT19_07265"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEY5838818.1"
                     /translation="MFRSRTCPAEEVVMQNINERPVCHRAEDLVTYLYDEATAEEARD
                     FSAHMQQCDACRAEFTVFHQVHDSIVTWRNEAIGSVVQVPQSTSEASAVAATDQFARP
                     ERKLSALAALREFFSVSPLWLRGATAFAGLLLCALIVFAVSRTWQQPVMTARDDDKKY
                     TEAQFQEAVRKQVEQIAKSSDEKREQMITPTNDDVQPQTQFATRRSRPKTQPSNKLTS
                     EEREQLAADLGLIPRREEELPFVLPEGEEPNQ"
     gene            3451..4029
                     /locus_tag="VIT19_07270"
     CDS             3451..4029
                     /locus_tag="VIT19_07270"
                     /inference="COORDINATES: protein motif:HMM:NF025173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEY5838819.1"
                     /translation="MRKAPIALLTLAATGVLLVASGSLRAQTPEPQQTPGVVQQQRRQ
                     MNQIEQMLRPLNITPDQEQRIQAIYAELADERQGANRRLRLAHRALSEAIQSPTPDEA
                     LIERRSKEVADAQATTIRLRSLTEARILQVLTQEQRVKLRQLQAQTQRRNQQNQRGLG
                     RSQNALRPNQTTAPLTPRQRRLMRQQQQQRPQ"
     gene            4444..5211
                     /locus_tag="VIT19_07275"
     CDS             4444..5211
                     /locus_tag="VIT19_07275"
                     /inference="COORDINATES: protein motif:HMM:TIGR00056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5838820.1"
                     /translation="MNIFTRLLLELQEMALLVARAVAGVFRKPRYWPETFAQMDSVGV
                     GSLTIIMLTGFFTGGVLTLQTYQTLASYGAVSQLGYLVSVALIRELGPTLTALMVTGR
                     VVSAISAELGSMVVSEQIDAMRALGTDPIRKLVTPRIVALVVTLPLLTLIADAVGIIG
                     AWTVSTWLYGLPSSMFVSSVRNGIQTEDIIGGVVKPLVFAFLMGTIACHKGLKTEGGT
                     VGVGRSTTSAVVTASIIVIIADFFLAKALQLILGTQP"
     gene            5208..6098
                     /locus_tag="VIT19_07280"
     CDS             5208..6098
                     /locus_tag="VIT19_07280"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY5838821.1"
                     /translation="MITEAGIHQSGISDDAADSTFREVDDSQRIIPAIEFRNVTIEFD
                     DRKVLDNLSFKVNRGETKIILGGSGCGKSTTIKLVLGLLKPDSGQVLVDGEDITHYSE
                     VDMMSVRKKIGMIFQEGALFDSLSVYDNVAFKLHEHRVPEDEVESEVRRMLQFVNLEQ
                     AIDKMPSELSGGMRRRVGIARALVGDPKIVMFDEPTAGLDPPTARTICELAMKLRDLE
                     DVSSIFVTHEMNNLGYLCSEYAVVNEAGEVVFEREGEKLCLINSKVIMMRDGKIIFSG
                     TDESLRRADDKYIQKFLRGH"
     gene            6259..7416
                     /locus_tag="VIT19_07285"
     CDS             6259..7416
                     /locus_tag="VIT19_07285"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEY5838822.1"
                     /translation="MPPPTRKKVGLAELRVGLLVLIALAVLIILILNASGSLNPFARS
                     LQLRARFTDANGLRDGSEVRLAGVRIGKVDRIRLMTASEVGPGPNPQKIEVYMTINAT
                     IDGVAANDRIRNDSTAQQASPSLLGSEMMVNITPGTALGAPVKDGDLLPSTSGNTMSD
                     LATRGTELADRLGKLSDQLNEVVKDVREGKGTVGRLFNDESLYNNLNATVRDIEELTQ
                     QIKSGKGSAGKLIYDDALYNNANSIAANLKLISDDIRAGRGSAGKFLTNDELYNKVNR
                     LTDRVNSSMNQIDSIVADVNAGRGTLGKLVKDEAIYNDARTAIARFNTTAERIDNVVA
                     GAQRGEGTLGKLITDEALYNNVNNLSSEGVKLLYDFRQNPKKYLTIKFQLF"
     gene            7465..10653
                     /locus_tag="VIT19_07290"
     CDS             7465..10653
                     /locus_tag="VIT19_07290"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEY5838823.1"
                     /translation="MKHFPRVLRQGLSIISLLALLASTVPFAIAQRTAVTKRPLTHAD
                     YDTWRSIVSPQISRDGKFVAYAYMSQDADSDIVVRNIATGKEWRAPRGYRPPAPPPDV
                     SIPGSAELIAEQARLVRPAFTADTRLVAFGIEPTKAELNKAKKEKKRPEEMPKTALGL
                     MDLSSGQVAKTDRVKNFQVPEDGSGFIAYLMEAKPGARDGAGGNPTVREGANAERTAE
                     GPKVEPSPIAGASSPSSSPTARESAMAGKPAVPTESSKSEPPAVAGGQPRSGANAGRA
                     PALPGGKKKDYGTDLVLRNTTTGTERTFSDVLDYTLSKDAKTLVFTVSSKKEDTNGVY
                     VVTTQSGAAPVAVISGKGKYQKLTWDEEQTELAFVSDRDDAEARQPKFKVYLWERGGN
                     PTVREGANAHSNGAAAPPPAVEVVSSASPGFRKDFVVSDKANLSFSLDGSRLFLGAAP
                     PPEPEKNADEEVSADEKVIADLWHWKDDYIQPIQRVRAEQERQRSYRAVYLTKEKRFV
                     QLADESMENINPSIDGRFAVGADNRAYRIESDHNPGYSDYYVINASDGSRKPIRQKQR
                     GGMSLSPGAKYAIFFDGKDWNSYSVADGRVVNLTKSLGINFYNEDNDTPDLPGSYGLA
                     GWTKDDREVLIYDRYDVWVVSPDGTGAKNLTDGVGRREKLAFRYVRLDPRERSIDPAK
                     PLLLRADNEDTRDEGFYRERIGGGLPEKLLMGAKGYNNPTKAKDADVLMFTASRFDEF
                     LDVWVTDINFKNQRKVSDGDAQRAKFTWGTAELVSFKNTDGVPLKGMLLKPDNFDPKK
                     KYPMLVYIYERLTPGLHGFRAPGPGTSINPSYYVSNGYLVFMPDIVYTTGYPGHSALK
                     CVLPAIQEVVDRGYVDEKAIGIQGHSWGGYQIAYMVTQTNRFRAAAPGAIVANMTSAY
                     SGIRWGSGLPRQFQYEHSQSRIGGSLWDYPMRFLENSPVFRADRVKTPLLMIHNDEDD
                     AVPWYQGIEFYLALRRLGKEVYMFNYNGERHGLRKRINQKDYTRRLQEFFDHSLKGAP
                     EPEWMKKGIPYLQREKEKEKYRVADGASEAKP"
     gene            complement(10819..>12744)
                     /locus_tag="VIT19_07295"
     CDS             complement(10819..>12744)
                     /locus_tag="VIT19_07295"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HEY5838824.1"
                     /translation="PVIILPQSLLNEIDENLLISAVGHELVHIARRDYLTNLIYEFVY
                     LPVWFHPAAWLIRRRIRQTRELCCDERVTSKLLPPDVYARSLVRMIGTSPLAPRMAAD
                     TTIGIVESDNLEGRIMSLLKSRKLTGRRKNILLLIASLLLAVPCIAATPFALSFEINQ
                     QEPTVSEQSRDQDEQEKQARLRAEMLAQVEKLREEERVAIPSARAEIELRLREVQRSL
                     EEHEKLVQQSQQLDPKARAEAAARLKEVQQNLEEHRRLLEQYQQKQGSDYEKAGEAYK
                     KLADLLAKYQESSQMRDAQQYVEAQKLLEQQYRETRKPRVIRRVEPVYPADAREKNIK
                     GSVILTMVVDREGNPTDIKIWRSLYPSMDQAAIEAARQMRFEPALKDGQPVSETLLVE
                     FYFSLQGKHVEVMGYGEGKGDGKGVGYASSQGSGGGAGAGGVYEAAFGDMRIRKEREA
                     KVQEDRARRHAELTQGATISMDRAIQVATSKYPGKVLACSLGRDKEGPVFYHIVIIVT
                     EGDKTTTRYVWVSAVDGTIIKTEDERKVSSISGGKLNARAIALPQPQYPDIARAAKAE
                     GQVTVEVTIDEQGNVIEARAISGHPLLQGASVKAARQAKFARTYMQEIRTNIESKIID
                     SGPVTVTGRLTYDFVIH"
BASE COUNT         2871 a         3599 c         3617 g         2657 t
ORIGIN      
        1 attgtgttcg tgtagtcgct ttgatttcgt tttagccgcg ttaccccggg gcgaatcttt
       61 cctgcttcgc acgccgcgat aaaggccgcg acaacgcgcg catcgtaacg cgtgccgacg
      121 aagctcttca gacgcgttag cgcagcttca agttccattg ccgcttgata gggccgttcg
      181 gtggtcattg cgtcgaacgt gtcggcaacc gaaacgatgc gcgcctgcat cgggatctcg
      241 tcgcctttca aaccttgcgg gtaaccctgg ccgttgatca tctcatgatg catgtacatg
      301 cccggcagga attcacgcat ggccgggatc tgcgacatga tcttgtagcc cttctgcggg
      361 tgcgtcttca tgatctcgaa ttcctgatcg tccagcgcgg cgggcttttt caaaatgcga
      421 tcgtcgatgc cgattttgcc gacatcatga agcagcgcgc tgatacgaat tttctcgact
      481 tctccttcgt cgagtccgag accctcggcc gtcgccacgg aaaagcgcga tacgcgctct
      541 gaatggcctc gcgtgtacgg gtccttgccg tcgatggccg ccgcgagcgc tttgaccgtc
      601 cccaggaaca gctctctgtt ttcctcagcc gagcgttgca aatcaagcac gaaacgctcg
      661 agccgatccg tcatctgatt gaatgacgat ccgagctcac ctaattctgt ccgccccaaa
      721 actttgacgc gctgcgaaaa gtcgccgccc gcgattcgcg tggcaccggc cgccagttca
      781 cgcacgggcc gagtcagctt ttcagcgaaa tagaatccgc aaacaagcgc gagcatcgcc
      841 gccagcagac tcacgaagaa aacctggttg cgcatgtcgc gcaccgaagc cagcgccgct
      901 gactcatcct gaattgcgat aaccgccagc agagaattcg tgtcgagctc tgccgtcgcg
      961 tatgaaccca gcatcgaaac cgacttgcca tcgcgctcga gcgagaacgg cgaaagcgcg
     1021 gactgcactt gcgaacctga ctcaagccag tcctggacga ctttaagatc cgtcatcggc
     1081 cgttcggcga aggcgatggc gacatctgga tgagctaccg cttttccgtt ttgatcgacg
     1141 acaaagacga ccggcaatcc ggcatcgagc aattcacgcg cgctcttcga cgatgattga
     1201 actgttttga aggcttcctg aaacgaaacg acggcgacga cggcggcgac tatttgatcg
     1261 ccatccatca ccggagccgc gatcgtcaga cccatctcct gaccggatcg aattatctgg
     1321 gggcggccga cgatgacgcc gcgcccgttc atgcgcgcga gaacttcgct cacgcgttga
     1381 tttacttctt ccttgcgaat gacgtccggt tgaaacgcgc gatgaatctc acctttgacg
     1441 ggacagattg ccagcgcgat caaattcgga tcgtcctgaa gcgctcgctg caaacgaacg
     1501 tctgagcctg cattagtcaa cgaatgaact ccgccggcaa actcgaaccc tctggccagg
     1561 ccgctgacga catcgcgata gcgctggccg tacaactcaa tctgtcgcgc tttgccctgc
     1621 accagttgcg cctggtagcg accttcgatc gcgcgcaact cttccgcact gcgtcgcgat
     1681 accagggtgc cggcgaccac aagcggtaaa aggccgacca gcagcaaaac tgccaggacg
     1741 acatagagca agcgaattcg gcgtaaacgt tcgaacacag ttcgggtatg agacgtggaa
     1801 atcgggcgag gagcagacgg acagggcaaa aggaaaggcg ctaagcgccc ttacacgtta
     1861 gagattagag gttggctgac cgacctgtca atggtttggc aatctttaac tgctgaaata
     1921 tttcgattta cgttccaatt ccgaccttct cataccattt aacggctggt tggccacgtc
     1981 cgtgcgatac tttcccaact gccgatgagg gcggggcgtc taaaacattg agcgcacggc
     2041 tgtttggtgc gcgcatttgg acggcttcgc tccgggtgac gcgaaccgaa tggaaacggt
     2101 cacgactgac gaacagatgg ttgaacgtgc cttgtcgggc gacccggagg ccttcggcga
     2161 aattgtgcgc cgctgggagc gtcgcatctt cgcgctgtcg ttcggcatgc tgggccgtga
     2221 agaggacgcg cgcgacgcca cgcaggaaac ttttctgtca gcgtttcgaa acctgcgggg
     2281 ctttcgtggc gaagcgaagg tttcttcctg gctgcatcgc attgcggtga atcagtgcat
     2341 tactcgccag agacgggcga aggtgcgcag cgaaacgccg ctggaagacg aagctgagaa
     2401 gaacgccgcg gtcttcgctc tgccggccga agtttcaccg gcgcgcgcgg ccgaacacgg
     2461 acagattagc gtcgcagtgc gtaaagcggt cattgctctg ccgccggact tgcgtcaggt
     2521 agtcgtgatg aaggaattcg aggatctaac gtttcaggaa atctcagacg tgctcggtgt
     2581 gcccctgagc acggttaaga gccgccttta cacggcgctc agacagttgc agatgcgcct
     2641 gcaaaagttt ggccaggcga aggcttagtg atgtttagaa gccggacttg tccggctgag
     2701 gaagttgtca tgcagaacat aaacgagcga ccagtttgtc atcgggccga agacctggtg
     2761 acgtacttgt atgacgaagc gaccgctgaa gaagcgcgtg acttttccgc acacatgcag
     2821 cagtgcgacg cgtgccgcgc cgagttcacg gttttccatc aggtgcatga ttcgatcgtc
     2881 acatggcgga atgaagcgat tgggagcgtc gttcaggttc ctcaatccac gagcgaagca
     2941 agtgctgtag ccgcaactga ccagtttgcc cggcccgagc gtaagctttc ggcgctggct
     3001 gctctgcgcg aattcttctc agtgtcgccg ttgtggttgc gtggcgcgac agcgttcgct
     3061 ggcctgctgc tgtgcgcgct aattgtgttt gccgtatcgc gcacctggca gcaaccagtt
     3121 atgaccgcgc gtgatgacga caagaagtac actgaagcac aatttcaaga ggcagttcgg
     3181 aagcaagttg aacaaatcgc caaatcaagc gacgaaaaac gtgagcagat gatcacgccg
     3241 acgaacgatg atgttcaacc gcaaacgcaa tttgcgacgc gtcgctcgcg cccgaaaact
     3301 cagccgtcta ataagctgac gagtgaagaa cgcgagcaat tggcggcgga cctgggattg
     3361 attccgcgtc gcgaggaaga actgcctttc gtgttgcccg aaggagaaga accgaaccag
     3421 taagcgttcg aatcgaagga cggtatgact atgagaaaag ccccaatcgc gttgttgacc
     3481 ctcgctgcca cgggcgtgct gttggtcgcc agcggttcac tgcgcgcaca gacgcctgaa
     3541 ccacaacaga caccgggtgt cgttcagcag caacggcggc aaatgaatca gattgaacag
     3601 atgctgcggc cgctgaacat cacgcctgac caggaacaac gaatccaggc gatctatgcc
     3661 gagttggcgg atgaacggca gggagccaat cgtagacttc ggctggccca ccgggcgttg
     3721 tcagaagcga tccagtcgcc aacaccggac gaggctttga tcgaacggcg ttcaaaggaa
     3781 gtcgcggacg cacaagccac cacgattcgt cttcgctcgc tgaccgaagc acgcatccta
     3841 caggtgctaa cgcaggaaca gcgggtgaag ctgcggcagt tgcaggcgca gacgcaacgt
     3901 cgcaatcaac agaaccagcg cggcctcggt cgtagccaga atgcgctcag gccaaatcag
     3961 accaccgcgc cgctcacgcc gcgccagcga agattaatgc gacaacagca acagcaaaga
     4021 cctcagtaaa acctgacccc acgctttgaa ggccggcctg gtgcattcgg gtcggccttt
     4081 ctagtttcca gacgatccca agtgaaaatc cgacagtgcg tcattttcag agctaaatga
     4141 cccgccactg acagccaaca tccttgacgc aagccgtttc gtttgcgcat tataggccgc
     4201 tctgtaaatc agggtgtggg agatagggtg tcgggtgtag aacaggcgga agagactccg
     4261 caagtcggca ccgaaggcgc gacctaatcg ggagattcct ttgccgacgg tccgcttccg
     4321 gatttcaaat ggatatgcgc agggttacta cacccaacaa cctaccccct acaccctaaa
     4381 ttgaagtcct gcctttgcgg ctaattgaaa ctgatctaac cgaccggcgg ttctgactaa
     4441 cgcatgaaca tcttcacgcg cctgctgctc gaactacagg aaatggcgtt gctggttgcg
     4501 cgtgccgtcg ccggagtttt tcgcaagcct cgctactggc ccgaaacatt cgcgcagatg
     4561 gacagcgtcg gcgtcggctc gctgaccatc atcatgctga ccgggttctt taccggcggc
     4621 gtcctgacgc ttcagacata tcaaacgctc gcgtcatacg gagcggttag ccagttgggc
     4681 tatctggtca gtgtggcact gatccgcgaa ttaggaccga cgctgacggc gttaatggtc
     4741 acgggccgcg ttgtctcggc gatctcagcc gaactcggct cgatggtcgt gtcagaacaa
     4801 atcgacgcca tgcgcgcgct cggaactgat ccgattcgca agcttgtaac gccacggatt
     4861 gtcgcactcg tcgtcacgct gccgctgctg actttgattg ccgacgcggt gggaatcatc
     4921 ggcgcgtgga cggtttccac ctggctctac ggtctgccgt catcgatgtt tgtaagttca
     4981 gtgcgcaacg ggatccagac tgaggacatc atcgggggag tcgtgaagcc cctggtgttt
     5041 gctttcttga tgggcacgat tgcttgtcac aagggtttga aaactgaagg tggcacggtg
     5101 ggagtgggcc ggtcaacgac ttccgcggtc gtgacggctt cgattatagt tatcatcgct
     5161 gacttctttc tcgcgaaagc actccagctc attttgggta cgcagccatg atcacggaag
     5221 ccggaattca tcaatcagga attagtgacg acgctgccga ctcgaccttt cgtgaggttg
     5281 acgactcgca gcgcataatt ccggccatcg aattccgcaa tgtgacgatt gaattcgatg
     5341 atcgcaaggt gctggataac ctgagcttca aagtgaaccg gggcgagacg aagatcattc
     5401 tgggcggctc aggttgtgga aaatcgacca cgattaagct cgtactcggg ctgttaaagc
     5461 cagacagcgg ccaggtgtta gtcgacggtg aagacatcac ccactattcc gaagttgaca
     5521 tgatgagcgt gcgtaagaag atcgggatga tcttccagga aggcgcgctg tttgattcgc
     5581 tttcggttta cgacaacgtc gcttttaaat tgcacgagca ccgcgtcccc gaagacgaag
     5641 tcgaaagcga agtgcgtcgc atgctccagt tcgtcaatct cgaacaagct atcgacaaga
     5701 tgccctccga actgtcgggc ggcatgcgcc gccgcgtcgg catcgcgcgg gcgctggtcg
     5761 gcgatccaaa aattgtgatg ttcgacgagc cgacagccgg tctggatccg ccgacggcgc
     5821 gcacgatttg cgaactggca atgaagttgc gggatctgga agacgtctct tcgatcttcg
     5881 ttacgcacga aatgaacaat ctcggctacc tgtgttccga atacgccgtc gtgaacgaag
     5941 ccggcgaagt cgttttcgaa cgagaaggcg aaaaactttg cttaattaac agcaaagtga
     6001 tcatgatgcg cgacggaaag attatcttca gcggcaccga cgaaagcttg cggcgcgctg
     6061 acgataagta cattcaaaag tttctgcgcg gacactgaaa ggcaaggatg aaggatgaag
     6121 gcggaaggat gaaagccttt ttcggaaacc cggcctctgg attaaaacgg aaaggaacta
     6181 gggacgaagc gaatgctggt tgatcgatga gttcattttt tcatccttca tccttcatcc
     6241 ttcatccttg ctgtacttat gccaccacca acccggaaaa aagtcggcct ggctgagctg
     6301 cgcgtcggct tgctcgtctt aattgcgctc gcggttctga tcattctaat cctgaacgcg
     6361 tcgggatcgc tgaacccgtt tgcccggagc ctgcaactcc gcgcgcgttt caccgacgcg
     6421 aacggcctgc gcgacggatc ggaagtgcgc ctcgcgggcg tgcgtatcgg caaagtcgat
     6481 cgcatccggc tgatgaccgc gtcggaagtt ggaccggggc caaatccgca gaagattgaa
     6541 gtctacatga ccattaacgc gaccattgat ggcgtggccg caaacgatcg catccgcaac
     6601 gactcgacgg cgcaacaggc ctcgccgagc cttttgggca gcgaaatgat ggtgaacatt
     6661 acgcctggaa cggcgctcgg cgcgcccgtg aaagatgggg atcttttacc ctcaacgtcc
     6721 ggcaacacga tgagtgacct cgcaactcgc ggcaccgaac tggccgaccg tctcggcaaa
     6781 ctttccgatc agctgaacga agtagtgaag gacgtgcgcg aaggcaaagg caccgtcggc
     6841 cggctcttca acgacgagtc gctctacaac aacttgaacg caacggtgcg cgacatcgaa
     6901 gaactgacgc agcaaatcaa gagtggcaag ggctcagccg gcaagctcat ttatgatgac
     6961 gccctctata acaacgcaaa ctcgattgcg gcaaatctca agttgatctc cgatgacatt
     7021 cgcgccggcc gcggttccgc gggaaaattt cttaccaatg acgagctcta caacaaagtc
     7081 aatcgcctca ccgatcgtgt aaacagctcg atgaatcaga ttgattccat cgtggccgac
     7141 gttaatgccg gccgtggcac gcttggcaag ctggtgaaag acgaagcgat ctacaacgac
     7201 gcgcggacgg cgattgcccg cttcaacacg acggcggaac gcattgacaa tgtcgttgcc
     7261 ggagcgcaac gcggcgaagg cacgctgggc aaactgatta ccgacgaagc gctatacaac
     7321 aacgtcaaca acctttcctc ggaaggcgtg aaactgcttt acgacttccg gcaaaacccg
     7381 aaaaagtatc tgacgatcaa attccagttg ttctaatcgc ggtgccgtgg gcgcctgaac
     7441 gctgcaaaac ttgtgaggtg aatcatgaag cactttcctc gagtgttgag gcagggcctc
     7501 tctatcattt cgttgctggc gctactggct tcgaccgttc cgtttgcgat tgcgcagagg
     7561 acggccgtca cgaaacgtcc gctgactcat gcggactatg acacctggcg gtcgatcgtc
     7621 tcgccgcaga tttcgcgcga cggaaaattc gtcgcgtacg cgtacatgtc gcaggacgct
     7681 gatagcgata ttgtcgtgcg caacatcgcc accggaaaag agtggcgcgc gccacgcggc
     7741 taccggccgc cagcgccgcc gccggacgtg tcgatccccg gctccgcgga actcatcgca
     7801 gagcaggcgc gtctggtgcg acctgcattc actgccgaca ctcgcttggt ggcgttcggc
     7861 atcgagccaa cgaaagccga actcaacaaa gcgaagaaag aaaagaagcg acccgaagaa
     7921 atgccgaaga ccgcgctcgg cctcatggat ttgtcgagcg gccaggtcgc gaagaccgat
     7981 cgagtgaaaa actttcaggt gccggaggat ggctcgggat tcatcgcata cttgatggaa
     8041 gcaaagccgg gcgcgaggga cggcgctggc ggaaacccga ccgttaggga gggtgcaaat
     8101 gcggaaagga cggcggaagg cccgaaggta gaaccgtctc cgatcgcggg cgcgtcttca
     8161 ccgagcagta gcccgactgc gcgagagagc gcaatggccg gcaagccggc ggtgccaacg
     8221 gaaagctcaa agtcagaacc gcctgcggta gcgggcgggc agccacgcag cggcgcaaat
     8281 gcgggcaggg cgcccgcgct cccgggcgga aagaaaaaag actacggcac cgatctcgtc
     8341 ctgcgaaaca cgactaccgg cacggaacgg acgttcagtg acgtcctcga ttacacgttg
     8401 agcaaagacg cgaagacgct cgtcttcacc gtgtcgtcga aaaaagaaga cacgaacggc
     8461 gtctatgtcg tgaccaccca aagcggagca gcaccggtcg ccgtcatttc cggcaaaggg
     8521 aaatatcaga agctgacctg ggatgaagaa cagacggaac tcgcgtttgt tagcgaccgc
     8581 gacgacgcgg aagccaggca gccgaagttc aaggtttatt tatgggagag gggcggaaac
     8641 ccgaccgtta gggagggtgc gaatgctcat tcaaatgggg cggcggcacc gccaccggca
     8701 gtcgaagttg tttcctcagc ctcgcccggc ttccgaaagg actttgtcgt cagcgacaag
     8761 gcgaatctca gtttctcgct cgatggcagt cgtttgtttc tcggtgctgc gcctccgcca
     8821 gagccggaaa agaatgctga cgaagaagtc tcggccgacg aaaaggtcat cgctgatttg
     8881 tggcactgga aagacgacta catccagccg attcaaagag tccgcgctga gcaggagcgg
     8941 caacgctcct atcgcgcggt ttatctgacg aaggaaaaaa gattcgtgca actcgccgac
     9001 gaatcgatgg aaaacatcaa cccatcgatc gatggccgtt tcgcggtcgg cgctgacaat
     9061 cgcgcatatc gaatagaaag tgatcacaat ccggggtatt ccgactacta cgtcatcaac
     9121 gcctctgacg gctcgcgcaa gccgattcgt cagaagcaaa gaggtggcat gtccctatcg
     9181 cccggcgcga agtacgcgat cttcttcgac ggtaaagact ggaactcgta ctcggttgcc
     9241 gacggtcggg tggtaaatct aacgaaaagc ctcggcatca atttttacaa tgaagacaac
     9301 gacacgcctg acttgccggg ctcgtacggc ctcgcgggct ggacgaaaga cgaccgcgaa
     9361 gttctgattt acgaccgcta cgacgtttgg gttgtctcgc ctgacggcac cggcgcgaag
     9421 aacctgactg atggtgtagg ccgccgcgag aaactggctt tccgttacgt gcgtctcgat
     9481 ccaagagagc gctcaatcga tcccgcgaag cctctgctgc tgcgcgcgga taacgaagat
     9541 actcgcgacg aaggcttcta tcgggaacgc atcggcggtg gtttgccgga aaagctttta
     9601 atgggcgcca agggttacaa caacccgacc aaagcaaaag atgctgatgt cttgatgttc
     9661 acggcctcgc gctttgacga gtttctggat gtctgggtta ccgacatcaa cttcaagaac
     9721 cagcggaagg tgagcgacgg cgatgcgcag cgcgcgaagt tcacttgggg tactgccgaa
     9781 ctcgtcagtt ttaagaacac tgatggcgtg cctttgaagg gcatgctcct gaagccggac
     9841 aattttgatc cgaagaagaa gtacccgatg ctcgtttaca tttacgagcg gctcacgccg
     9901 ggcctgcacg gcttccgcgc gccggggccg ggcacttcga tcaatccgtc gtactacgtc
     9961 agcaacggct acctcgtctt catgccggac attgtttaca cgaccggata tcccggacac
    10021 agcgcgctca agtgtgtgct gccggcgatc caggaagttg tcgatcgtgg ttatgttgac
    10081 gaaaaagcga tcggaattca ggggcacagt tggggcggct atcaaatcgc ctacatggtc
    10141 acgcagacga atcgctttcg cgcggctgca cccggcgcca tcgtggcaaa tatgaccagc
    10201 gcctacagcg gcatccgctg gggctcaggc ctgccgcgtc agtttcagta cgagcactcg
    10261 caatcccgca tcggcggatc gctttgggat tatccgatgc gctttttaga gaactcgccg
    10321 gtgtttcgcg ctgaccgcgt gaaaacgcct ctgctgatga ttcacaacga tgaagacgat
    10381 gcggtgccgt ggtaccaggg catagagttc tacctcgcgc tgcgccgcct cggtaaagag
    10441 gtttacatgt tcaactacaa cggcgagcgg cacggcctgc ggaagcgcat caatcagaag
    10501 gactacacgc gccgcttgca ggagttcttc gatcattccc tgaagggcgc gcctgagcct
    10561 gaatggatga agaaaggaat tccctatttg caacgcgaga aggagaaaga aaagtatcgc
    10621 gtggctgacg gtgcttcaga agcgaagcct taatggaggt gcattcagtg tcgtaggcgc
    10681 tggatgttta tagatagaat cctcttaatt ttaatgctcg aaatcgaaag cagaagcttt
    10741 cgatttcgag cattttctct gcaaacaagg tctataaaca ttccactcct aacggagtgg
    10801 aaaacctcac ggagttcgtc aatgtatgac gaagtcgtaa gtgagtcggc ccgtcaccgt
    10861 caccggccct gaatcaatga tcttgctttc aatgttggtc cggatttcct gcatgtaggt
    10921 ccgcgcgaat ttcgcctggc gggctgcttt aactgaagcg ccttgcagca aagggtgccc
    10981 cgagattgcc cgcgcttcga ttacatttcc ctgttcatcg attgttactt cgactgtcac
    11041 ctggccttca gctttagcgg cgcgagctat gtcgggatat tgtggctgcg gcagagcaat
    11101 agctcgtgca ttgagcttgc cgcctgaaat tgatgatact ttcctctcgt cctcggtctt
    11161 gataattgtg ccatccacgg cgctgaccca gacgtacctg gtcgtagtct tgtcgccttc
    11221 agtaacgata atcacgatgt gatagaagac ggggccttcc ttgtcgcgac ccaggctgca
    11281 cgccaaaacc ttccctggat acttgctggt ggcgacttga atcgcgcgat ccattgagat
    11341 ggttgcgccc tgggtcagct cggcgtgccg gcgcgctcga tcttcctgca ccttcgcttc
    11401 acgctctttg cggattcgca tgtccccaaa cgctgcctca taaacaccgc ccgcaccggc
    11461 gcctccaccg ctgccctgac tactggcata ccccacgcct tttccgtcgc cttttccttc
    11521 gccatatccc atcacttcga cgtgcttgcc ctgcagcgag aaatagaact cgaccagaag
    11581 cgtctcagaa accggttggc catccttcag cgccggctca aaacgcatct gacgcgccgc
    11641 ttcaatagcc gcttgatcca ttgaggggta cagcgaccgc caaatcttta tgtccgttgg
    11701 attgccttcg cgatctacga ccatcgtgag tatcactgag cccttgatgt tcttctcacg
    11761 agcatccgcg ggataaaccg gctcgacgcg gcgaatgact ctgggtttcc gtgtctcacg
    11821 atattgttgt tccaacagtt tctgagcttc cacgtactgc tgcgcgtcac gcatctgcga
    11881 cgattcctgg tactttgcca gcaggtccgc caatttcttg tacgcctcac ccgctttctc
    11941 atagtcagac ccttgtttct gttgatactg ttccagaagc cgccggtgct cttcgaggtt
    12001 ctgctggact tcctttagtc tcgctgcggc ttcagccctc gctttgggat ccagctgttg
    12061 gctctgctgc acgagcttct catgctcttc aagcgatcgc tggacctcgc gcaatctgag
    12121 ttcaatttcg gctcgagccg atggaatcgc cacgcgctct tcttctctta gcttctcgac
    12181 ttgcgccaac atctccgcgc gtagtcgtgc ttgtttctcc tgttcatcct gatcacgact
    12241 ttgctccgat actgtgggct cctgctggtt gatctcgaaa ctcaatgcga acggagtcgc
    12301 cgcgatacaa ggaacggcga ggagcagcga tgctattaag agcaaaatat tcttacggcg
    12361 accagtaagc ttgcgtgatt tgagtagaga cataattctt ccctccaggt tatcggattc
    12421 aacaatgccg atcgtggtat cggcggccat gcggggagcc aacggcgaag ttccaatcat
    12481 gcgcactagt gaacgcgcat aaacatcggg cggcaacagt tttgacgtca cccgttcgtc
    12541 gcagcacagt tcgcgtgtct gccggatccg ccggcggatc aaccaggcgg ccgggtggaa
    12601 ccacaccgga agataaacga actcgtaaat caggttcgtg aggtaatcgc ggcgcgcaat
    12661 gtgaaccaac tcgtgcccga ccgctgagat caatagattc tcatcaattt cattcagcag
    12721 tgattgcggc agaatgatga cggg
//
LOCUS       DATDBY010000391         3735 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_825670, whole genome shotgun sequence.
ACCESSION   DATDBY010000391 DATDBY010000000
VERSION     DATDBY010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3735
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_825670"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..434)
                     /locus_tag="VIT19_07300"
     CDS             complement(<1..434)
                     /locus_tag="VIT19_07300"
                     /inference="COORDINATES: protein motif:HMM:NF019126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HEY5838825.1"
                     /translation="MADPFVAEIRIFPFNFAPKGWAWCDGQLLPLSQNTALFSLLGTT
                     YGGDGKSNFALPDLQGRAPMHPGQGPGLSLHDLGETGGSETVTLLESEIPSHNHTLRS
                     SAEDADADNPAPTNVTGGSAGVSLYLGAPNQVVVASQMSPNAL"
     gene            complement(495..998)
                     /locus_tag="VIT19_07305"
     CDS             complement(495..998)
                     /locus_tag="VIT19_07305"
                     /inference="COORDINATES: protein motif:HMM:NF019126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HEY5838826.1"
                     /translation="MAQPYVGEIRMFAGNFAPAGWMFCEGQLLPISENETLFQLIGTT
                     YGGDGESTFALPDLRGRLPIHQGNGFILAETGGAEEITLTVNQIPAHTHPFLGSSQTA
                     TVALAPGNVLAKSASNIYVANAAPDTNMSASSISPIGGSQPHTNFQPYLCVDFIISLF
                     GIFPSPT"
     gene            complement(1012..1509)
                     /locus_tag="VIT19_07310"
     CDS             complement(1012..1509)
                     /locus_tag="VIT19_07310"
                     /inference="COORDINATES: protein motif:HMM:NF019126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HEY5838827.1"
                     /translation="MAEPFLSEIRIMSFVFAPKSWALCNGQLLPINQNQALFSLLGTT
                     FGGDGRVNFALPDLRGRTPIHVGSGHTLGEKGGEQAHTLSISEIPTHVHSVNVGGVGN
                     VPNPSSALYANANNQCYNAAQALISFPPGCVTNTGGSQAHLNMQPFLTLSFCIALQGI
                     FPSPN"
     gene            1832..2320
                     /locus_tag="VIT19_07315"
     CDS             1832..2320
                     /locus_tag="VIT19_07315"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5838828.1"
                     /translation="MQLTRGGILSLRPVTTEDDAFLLSVYDSTRAQELDQAQWAEGQR
                     EAFLKWQFDMQRSQYDTRFPNAEYHVILIDGEPAGRIWIGRRDAEIRLLDIAILPPFQ
                     NRGAGTILLRKLMDEAKVTGKRLRHMVFVLNNDAHRFYERLGFVVIEDLGGYKHMEWN
                     GR"
     gene            complement(2374..2679)
                     /locus_tag="VIT19_07320"
     CDS             complement(2374..2679)
                     /locus_tag="VIT19_07320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838829.1"
                     /translation="MSTNLTEQEFSKHVGTQFKIALAESELSLTLTAAKAYTPGENEQ
                     DGMERFSVFFEGPGDVILPQKTYQLQHDKMGEIDLFLVPISGDRNGFRYEAVFNYYR"
     gene            complement(2797..>3735)
                     /locus_tag="VIT19_07325"
     CDS             complement(2797..>3735)
                     /locus_tag="VIT19_07325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838830.1"
                     /translation="VMGVPTPPAKTSSDPKDKNKPEPLPIVLIGIKNREAARRLLPRV
                     LEGLGIGEANFLAQNERRGDSEIVSYAGIFSYAFVGNFLVVSDSENVRKVADAHMNGT
                     TLGANNTFRSARHWQSRQTLGEIYVSPVLMEGYQDQIGKQAASMDQTMRDFLMKLSPK
                     ASAITYTLSHDGLGSLHELHLPKNLILAMVAGTSATMSAMKEGSPEMNEMIAISVLHM
                     IANGEENYKKTAGNGSYGSIDELVEHKHLGKEMLDKYGYRFVILPNAHGFEAVATPVE
                     YGKSGKRSFFIDQSRVVRGDDKGGGPATVADKPVEQ"
BASE COUNT          830 a         1039 c         1009 g          857 t
ORIGIN      
        1 agtgcgtttg gcgacatctg cgacgcgacc acgacttgat taggcgcgcc aagataaagc
       61 gagacacctg ccgatccgcc tgtcacattt gtcggagccg ggttatcggc gtctgcgtct
      121 tcggctgagg atcgcaaagt atggttgtgc gaaggaatct ctgactcaag cagcgtcacg
      181 gtttctgaac cgccggtttc gcccaggtcg tggagcgaaa gacccggccc ctggcccgga
      241 tgcatgggcg cgcgtccctg cagatccggt agcgcaaaat tggacttacc gtccccgccg
      301 taagtcgtac caagtagcga aaagagggcc gtgttctgcg aaagcggcaa taactgccca
      361 tcgcaccagg cccagccttt gggggcgaag ttgaaaggga agattcggat ttcagcgaca
      421 aatggatctg ccatgataag tctccttggc caagtttgtg acgaatcgaa aacgcctgct
      481 accgttcatc agcatcatgt tggactcggg aaaatcccaa agagcgaaat aatgaagtcc
      541 acgcaaagat acggttgaaa gttagtgtgt ggttggcttc caccaatcgg gctaattgag
      601 ctcgcactca tgttagtgtc cggagccgca ttcgccacat aaatgtttga ggcggacttg
      661 gccaacacgt taccgggcgc cagcgcgacg gtcgctgtct gacttgaccc gagaaacgga
      721 tgtgtgtggg ccggaatctg attgacggtg agggttatct cctctgcccc gccagtctcg
      781 gccagaataa atccgttgcc ctgatgaatc ggaagccgcc cacgcagatc aggtaatgcg
      841 aaagttgact caccgtcacc gccgtaggtc gtcccgatta gttggaacag cgtctcgttc
      901 tcagagattg gcagcagttg gccttcgcaa aacatccagc cggccggggc gaagttgccc
      961 gcaaacattc tgatttcacc gacgtatggt tgtgccatct ttgttctcct tctagttggg
     1021 cgacgggaag atcccttgta acgctataca aaaagacaag gtcaggaatg gctgcatgtt
     1081 caagtgcgcc tgacttccgc ccgtattcgt aacgcaacct ggtgggaacg aaatgagcgc
     1141 ttgcgccgcg ttatagcact gattgttcgc gttcgcgtat aaagcggaac tcgggtttgg
     1201 gacgttgccg acgccaccga cattgaccga atgaacgtgc gtaggtatct cactaatcga
     1261 aagcgtgtgc gcctgctcgc cacctttttc gcccagcgta tgaccgctgc cgacatggat
     1321 cggtgtgcga ccgcgcagat cgggaagcgc gaagttgaca cgcccatcgc caccaaaagt
     1381 cgtgcctagc aaactgaaaa gcgcctgatt ctgattaata ggcaggagtt gcccgttaca
     1441 caacgcccaa ctctttggcg cgaaaacgaa gctcataatc ctgatttcag agagaaatgg
     1501 ttctgccatg tttttctact cccatcgagt aaggtcggaa ttatctccac acgtggctgg
     1561 aaagacaggc cgtccggggg aaacgccgcg aaactcggaa agatcaaagc cggaaactgc
     1621 tggttgaaat ctgaagcggc gcgcattcta tgcgtaagct ttaaggattg caagcacatt
     1681 tttatacagg ccaaaagaaa tccgcacatt acgccgatta cgcagagcca gaaacattcg
     1741 gtgaggctga ctaaaggttt tcacggtcgc catggcgcgc ctttgctttg ccctttcatc
     1801 tgtgtaatct gcgtaatctg tggataagga aatgcaactc acgcgcggcg gaatattgtc
     1861 cctgcgcccc gtcaccaccg aggacgacgc tttcctgctg tcggtctacg acagcacgcg
     1921 cgcccaggaa ctcgatcagg cgcagtgggc ggaaggacaa cgtgaagcat ttctcaagtg
     1981 gcagttcgat atgcaacgca gccagtacga cacgcgcttt cccaacgctg agtaccacgt
     2041 gattctgatc gacggagagc ctgccggccg catctggatt ggtcggaggg atgcagagat
     2101 ccgtctattg gacatcgcca ttctcccccc gtttcaaaac cgcggcgcgg gaaccatcct
     2161 gctgcgaaag ttaatggatg aagcaaaggt gaccgggaaa cgtcttcgtc acatggtctt
     2221 tgtgctgaac aatgacgccc atcggtttta cgagcgcctg ggattcgtgg tgattgaaga
     2281 tctgggtggg tacaagcaca tggagtggaa tggcaggtga cagccaatct ctgtcgagcg
     2341 tttgagtgcc tggcacccga cacccgtgac ctgtcaccta tagtagttga agaccgcctc
     2401 gtaccgaaag ccattccggt ctccgctgat cggcacaaga aagagatcaa tctcacccat
     2461 cttatcgtgt tggagctggt aggttttctg gggaagtatg acgtcacccg gcccttcaaa
     2521 gaacactgaa aagcgctcca tgccgtcttg ttcgttctca ccgggcgtat aggctttggc
     2581 tgcagtgagc gtgagactga gttcgctctc cgccaacgca attttgaatt gcgtgccgac
     2641 gtgtttcgag aattcttgtt ccgttaggtt tgttgacatt gtttgcgaag cgaaaccgtt
     2701 gaaacggttt catgaatttt ctctgtgact tgtctcacct cgctaaagcg aggtgtgaat
     2761 gaaactgctt gctgcgcacc gctcactgca caccgctcac tgttccaccg gcttatccgc
     2821 gacggttgcc gggcccccac ccttatcgtc accccgcacg actcgggatt gatcgatgaa
     2881 gaaagaacgc ttgcccgatt tcccgtactc aaccggcgta gccacagctt cgaagccgtg
     2941 cgcatttggc aagattacaa atctgtagcc gtacttgtcc aacatttcct tgcctaaatg
     3001 tttgtgttca accagttcgt cgatgctgcc gtaacttccg ttgccggcgg tctttttgta
     3061 attctcttct ccgttcgcga tcatgtgcag gacgctgatc gcaatcatct cgttcatttc
     3121 cggcgagcct tccttcatcg ccgacattgt cgcgctggtg ccggcgacca tcgccagaat
     3181 caggttcttc ggcaggtgca actcatggag tgagccaagc ccgtcgtgcg aaagcgtgta
     3241 agtaatcgca ctcgcctttg gactcagctt catcagaaag tcgcgcatgg tttgatccat
     3301 cgacgccgcc tgcttcccga tttggtcctg atacccttcc atcagcacgg gcgaaacata
     3361 aatttcaccc agagtttgcc gcgactgcca gtgccgtgcg ctgcgaaacg tattattcgc
     3421 ccccaaggta gtgccgttca tgtgtgcatc cgcaacctta cgcacgttct ccgaatcgga
     3481 caccaccaga aagttgccga cgaacgcata cgagaagatg ccggcgtagc tgacaatctc
     3541 actgtcgccg cggcgctcgt tctgggccaa aaaattcgct tcgccgatac cgagaccttc
     3601 gaggacacgc ggcagcagac gccgcgccgc ctcgcgattc tttatgccga tcagaacgat
     3661 cggcaggggc tctggcttgt tcttatcttt cggatcgctg gaagtcttcg ccggcggtgt
     3721 cggcacgccc atcac
//
LOCUS       DATDBY010000392         2872 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_414061, whole genome shotgun sequence.
ACCESSION   DATDBY010000392 DATDBY010000000
VERSION     DATDBY010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2872
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414061"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..834)
                     /locus_tag="VIT19_07330"
     CDS             complement(<1..834)
                     /locus_tag="VIT19_07330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838831.1"
                     /translation="MSSAEETISTKRTSQPPMRLWLRQIAAIMRLELKKNFFGKRAVL
                     VYLLTLMPIGLLLMIALLPPVAREWLDFSEYPKLFSFIYNGFILRTVVFFGCAWIFMN
                     LFRGEIVDRSLHYYFLSSVHREVLITGKYISGLVTSAVLFVGVTVISMLLMFFPHFYS
                     ASMRFFFEGGGMSQLLTYAGITLLACIGYGAFFIVVGLFFRNPIIPSLMLYGWEWINF
                     LLPPVLKKVSVIHYLNSLVPVPVSEGPFAVIVEPTPAYISVPGLLIVTALVLIAAGTR
                     IR"
     gene            complement(973..1986)
                     /locus_tag="VIT19_07335"
     CDS             complement(973..1986)
                     /locus_tag="VIT19_07335"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5838832.1"
                     /translation="MLDETKISQSAIRKAGSPAGQPGWGASSQAEIVFDNVSKFYGEI
                     LGVNRVTLAIPPGITSLVGPNGAGKTTLMNLMTGLLRPTRGSVNVLGIPTDRPEQLFR
                     KLGYCSQFDSFPRGLTGREFIRSFLLVSGYSKTESEDLTNKALERVDLVPAGDRKIGA
                     YSKGMRQRVRLAQSIAHQPSVLILDEPLNGLDPMVRAETIALFKQLAAEGLHLIISSH
                     ILHEVDMMSDRVVLLNNGYVIAEGGIHGVRDEMDTEHPMQVLIRCNKPAVLAARMFGS
                     NYLVEARVHNDLRGLFVKTRDPDKFYLLLNEVVAEGEVDIESVAPVDDDLSAVYEYLI
                     GSQ"
     gene            complement(2042..>2872)
                     /locus_tag="VIT19_07340"
     CDS             complement(2042..>2872)
                     /locus_tag="VIT19_07340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838833.1"
                     /translation="TRHAFRDVFRSKIFTGIFLLSFVWPLVCAILIYLHHNVNVLAMW
                     QINVRDLLPIDAAFFQYWVVVPQGYLGFFLAMLIGPSQVSRDLTNNALPLYLCRPFTR
                     TEYVVGKMSIVIVLLSLMSWIPGLLLFLLQSYLEGWTWFTQNIPIASAIFMGSLVWIL
                     LLALMTQAISAWVRWRVASRAALLAAFFIPSTFAAIVNEIFQTSWANIFSLQALIWNV
                     WAGLFGTFQRQTVQYGGRGSQIFLTEPPLWASWLVLFLICAACLALLSRKVKAYEVVK
                     "
BASE COUNT          734 a          829 c          780 g          529 t
ORIGIN      
        1 gcgaatgcgc gtgccggcgg caatcagaac cagcgcagtc acaatcagca gtcccgggac
       61 agagatatag gcgggcgtcg gctcaacgat gacggcgaat ggtccttcag agaccggcac
      121 cggcaccagc gagttcaaat aatgaatgac gctgactttc ttcagaaccg gcgggagcag
      181 aaagttgatc cattcccagc cgtacagcat cagcgacgga atgattgggt tgcgaaagaa
      241 caaaccgacg acgatgaaga acgcgccata gccgatgcat gcgagcagag tgattccggc
      301 ataagtcagc aactgcgaca ttcctccgcc ttcaaaaaag aagcgcatgc tggcggaata
      361 gaagtgcggg aaaaacatca gcagcatcga tataaccgtg acgccaacaa acaagaccgc
      421 cgaggtcact aatcccgaaa tgtactttcc ggtaatgaga acttcgcgat ggaccgacga
      481 aagaaaataa tagtgcaggc tgcgatcgac gatttcaccg cggaacaggt tcatgaagat
      541 ccaggcacag ccgaagaaga caaccgtgcg caggatgaag ccgttgtaga tgaatgagaa
      601 aagtttcggg tactcgctga agtcgagcca ctcgcgcgcc acgggcggca agagcgcgat
      661 catcaacagc aagccaatgg gcatgagcgt gagcagatag accagcacag cgcgtttgcc
      721 gaagaagttc ttcttcagct cgagccgcat aatggccgcg atttgccgca accagaggcg
      781 catcgggggc tgcgacgttc tctttgtcga gattgtttct tcggctgaac tcataagctc
      841 caaatctgtg tcagaaccga gagcggtagc gaccggataa tgattccagg ttgagttctc
      901 gatcccgtcg catccaccac cccacgcggg ctgcccgcgc ggggaccccg gtccgctccg
      961 ggttctgaca cgctactgcg atccaatcaa gtattcgtaa accgcgctca gatcatcatc
     1021 gaccggcgcg acagattcga tatcaacttc gccttccgcc acgacttcat tcaaaagcag
     1081 gtagaacttg tcgggatcgc gcgtcttcac gaacaacccg cggagatcat tgtgcacgcg
     1141 cgcttcgacc aggtaattgc tgccgaacat gcgcgcggcg agcaccgcgg gtttgttgca
     1201 gcgaatcagg acctgcatcg gatgttcagt gtccatctcg tcccgcacgc cgtgaattcc
     1261 gccttcggct atgacgtagc cgttgttcag caacacgacc cggtccgaca tcatgtccac
     1321 ttcgtgcaga atgtgactcg aaatgatcaa gtgcagacct tccgccgcca gttgcttgaa
     1381 caacgcaatc gtttccgcgc gcaccatcgg atcgagaccg ttcagcggct cgtccagaat
     1441 cagcacggat ggctgatgcg cgattgactg cgcgagacgc acgcgctgtc gcatgccttt
     1501 gctgtacgca ccaatctttc gatcaccggc cgggacaaga tcgacgcgct ctaaagcttt
     1561 attcgttaag tcttcacttt cggttttcga ataaccagat acgagcagaa acgagcgaat
     1621 gaactcgcga cccgtcagtc cgcggggaaa cgaatcgaat tgggagcagt aaccgagctt
     1681 ccgaaataac tgctcaggtc gatctgtcgg gatgcccagg acgttgaccg agccgcgcgt
     1741 cggccgcagc aagcccgtca tcagattcat cagcgttgtc ttccccgccc cgttcggccc
     1801 gacgagactg gtgatgccgg gcggaatcgc gagcgtcacg cgattcacgc cgagtatctc
     1861 gccgtaaaac ttcgagacgt tatcgaagac gatctcggct tgcgaactag caccccagcc
     1921 gggctgcccg gccggggacc ccgctttgcg gattgcggat tgcgaaattt ttgtctcgtc
     1981 tagcatgaaa tcagctctta gctcgtcgca aattcgaaat ccgcacttcg aaattcgaaa
     2041 ttcatttcac cacctcgtac gctttaactt tgcgcgatag cagcgccagg cacgccgcgc
     2101 aaatcaaaaa cagcaccagc cacgatgccc acagcggtgg ctcagtcagg aatatctggg
     2161 agccacggcc gccgtactga accgtctgcc gctgaaacgt cccgaacaat cccgcccaaa
     2221 cgttccaaat caatgcctgc agtgaaaata tgttggccca actggtttga aagatctcat
     2281 taacaatcgc cgcgaacgtt gacggaatga agaacgctgc gagcagggcc gcgcgcgacg
     2341 caacgcgcca acgcacccat gcggaaattg cctgcgtcat caatgccagc aaaagaatcc
     2401 acacgaggct gcccatgaaa atcgcgctcg cgatcgggat gttctgcgtg aaccacgtcc
     2461 agccctcgag atagctttgc agcaggaaca ggagcagccc gggaatccag ctcatcaacg
     2521 acagcagaac aatgacgatg gacattttgc cgacgacgta ttcagtgcga gtgaatggac
     2581 ggcaaagata gagaggcagg gcgttgttcg taagatcgcg cgagacctgt gacggcccga
     2641 ttagcatcgc caggaaaaac ccgagatagc cttgcggaac gaccacccaa tattgaaaga
     2701 acgccgcgtc gatcggcagc aggtcgcgaa cgttaatctg ccacatcgcc agcacgttca
     2761 cgttatggtg caggtaaatc agaatcgcgc ataccagcgg ccagacaaac gacagcagga
     2821 agatgccggt aaagatcttt gaacggaaca cgtcgcgaaa cgcgtgacgc gt
//
LOCUS       DATDBY010000393         2475 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2375363, whole genome shotgun sequence.
ACCESSION   DATDBY010000393 DATDBY010000000
VERSION     DATDBY010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2475
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2375363"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..535)
                     /locus_tag="VIT19_07345"
     CDS             complement(<1..535)
                     /locus_tag="VIT19_07345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838834.1"
                     /translation="MTLDQVKARVPQVQFGRPDEIGLTKTSINPLYDPRFDKVAFADI
                     RTISFEFLDGKLTTLWIGYEGSFKWQSVDEFVKGISKSLNVPGSWSPKRGGQQLRCEG
                     FTVYVALIAGSPSIRLSDDAADEMVGVRREEVTAAAEAQVIADKITKLYYPADCEAAK
                     NISPPDRIVLKNKEEAEK"
     gene            complement(679..1080)
                     /locus_tag="VIT19_07350"
     CDS             complement(679..1080)
                     /locus_tag="VIT19_07350"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5838835.1"
                     /translation="MQAQAVINRTRPQQTILLVEDFDDTRLMMKLWLQKKGYRVIEAE
                     GGEQAVELAQRVRPDLIIMDMMMPGLGGLDATRQIREYQFLRQTPIVAVSAYGADEYR
                     ARALDAGCTEYVPTPFEPEALSHLIERLLAP"
     gene            complement(1111..1187)
                     /locus_tag="VIT19_07355"
     tRNA            complement(1111..1187)
                     /locus_tag="VIT19_07355"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1151..1153),aa:Arg,seq:ccg)
     gene            1551..>2475
                     /locus_tag="VIT19_07360"
     CDS             1551..>2475
                     /locus_tag="VIT19_07360"
                     /inference="COORDINATES: protein motif:HMM:TIGR00393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEY5838836.1"
                     /translation="MSETHLQVIELLRAESDAIAKAAARLQASDIDPAIDLLAKCRGK
                     VIVLGVGKSGIIGQKIAATMTSSGTAALFLHPSDALHGGLGIVTSDDAVVMLSNSGET
                     AELLGLLPYLKQRNVPLIAILGNVNSSIAQRADVVIDASVDQEACPLNLAPTASTTVA
                     LAIGDALAMTLMRAKGLTENDFASNHPGGQLGKRLTLRVADLMHGGIENPTIAPDGAW
                     MEIVSAITHFGLGAVNVVNSDGRLAGVITDGDLRRSLQRIAAKDLAFANMTCDELMTR
                     DPVVATPTMLAYDALRLMEDRASQISVLPVVD"
BASE COUNT          540 a          678 c          728 g          529 t
ORIGIN      
        1 ccttttcggc ttcttccttg ttctttaaga cgatgcgatc cggcggcgag atgtttttag
       61 ccgcttcgca gtccgcaggg taatacagtt tggtgatttt gtccgcaatc acttgcgcct
      121 cggcggcggc agtgacttcc tcgcgccgca ccccgaccat ttcgtcggcc gcgtcgtctg
      181 acagacgaat gctggggctg cccgcaatta acgcgacgta aactgtgaag ccttcacaac
      241 gcagttgctg cccgccacgt tttggcgacc acgagccagg cacgttcagc gacttgctga
      301 ttcccttaac aaactcatcg accgactgcc atttgaaaga accttcatag ccgatccaaa
      361 gcgtcgtgag cttgccgtcc agaaactcga acgagatggt gcgaatgtct gcgaaggcta
      421 ctttgtcgaa ccgcggatcg taaagcggat tgatgctggt cttagtgaga ccgatttcgt
      481 cgggccggcc gaattggact tgcggcacgc gcgctttgac ttgatcgagc gtcatcccga
      541 gccgaaatcc ccgaagctca gacgcgtccg aaagctgatc gcttcgagcg gaacatggtt
      601 gagctgagat actcataccg ctgacgagac agagaagaat tgaacagaag atgtgaagag
      661 cgaatcgcga acggtgggtc atggggcgag caatctctcg atcaaatggc tcagcgcttc
      721 gggctcgaac ggcgtcggga cgtattcggt gcaaccagcg tccagcgctc tggctcgata
      781 ttcatcagcg ccgtaagccg aaacggcgac aattggcgtc tggcggagaa actgatactc
      841 gcggatttgc cgggtcgcgt caaggcctcc taatcccggc atcatcatgt ccatgatgat
      901 caaatcaggc cgtacgcgtt gggccaattc gactgcctgc tcgccaccct cggcttcgat
      961 cacacggtaa cctttcttct gcagccagag cttcatcatc agacgcgtat cgtcaaagtc
     1021 ttcgaccagc agaatggtct gctgcggacg ggtacggtta atgacagctt gagcctgcat
     1081 ggcaacagtc gcgaggattg ggcaagagtt tggtacccgc ggcaggggtc gaacctgcga
     1141 cctctcgctc cggaggcgag cgctctaatc cactgagcta cgcgggcatg gggcagaaga
     1201 aaatttagca tagcggagta tgcgagttcc agcgttagtc agggtgaagg gtttagggtg
     1261 ttgggggtag cgtgatagat cccagattcc gaaaggtccc tggttaacag ctcgagacct
     1321 tgcggctctc attcacgcct cgcttcagcg aggcggcaga gctaagcaag tatcccccga
     1381 accgttttaa cggtttccgg ttaagccgtt gaaacggcta agaaaaattt gtggaccgaa
     1441 aaacacctcg ctaaagcgag gtgtgactga gatcggcttt ttgggcagtc caactcccta
     1501 caccctccct ccttgcaaaa tgcttcatac ctcgtatatc aacatccgga atgtccgaga
     1561 cgcatttaca agtgattgaa ctgctgcgcg cggaatccga cgcgattgcc aaagccgcag
     1621 cgcgcctaca ggcgagcgac atcgatccgg cgatagactt gctggcgaaa tgccgcggca
     1681 aggtgatcgt gctcggcgtc ggcaagtccg gaatcatcgg gcagaagatc gcggcaacta
     1741 tgaccagcag cggcaccgcc gcgctctttc tgcatccatc cgatgctctt catggaggtc
     1801 tcgggattgt tacctccgac gacgcagtcg taatgttgag caacagtggc gagaccgccg
     1861 agctgctcgg actgctgccg tatttgaagc agcgcaacgt gccgctgatc gcgattctcg
     1921 gcaacgtgaa ctcctcgatc gcgcaacgcg cagatgtggt gattgatgct tcggtcgatc
     1981 aggaggcatg tccgctgaat ctcgcgccga cagcgagcac cacggtcgcg ttggcaatcg
     2041 gagacgcgtt ggcgatgacg ctgatgcggg cgaagggttt gacggaaaat gatttcgctt
     2101 cgaaccatcc gggcggccag ttgggcaaac gcctgacttt gcgggttgct gatctaatgc
     2161 acggcggaat tgaaaatccg acgattgcgc ctgacggagc gtggatggag atcgtgtctg
     2221 cgattacgca tttcggactc ggcgctgtga acgtggtcaa tagcgacggg agactggcgg
     2281 gcgtgatcac tgatggagat ctgcgccgat cgctgcaaag aatcgccgcg aaagacctcg
     2341 cgttcgcgaa tatgacctgc gacgaattga tgacccgcga tcccgtcgtg gcaactccga
     2401 caatgctggc ctacgatgct ttgcggctaa tggaagatcg agcttcgcaa atcagcgtgc
     2461 ttccggtagt tgatg
//
LOCUS       DATDBY010000394         9159 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1026212, whole genome shotgun sequence.
ACCESSION   DATDBY010000394 DATDBY010000000
VERSION     DATDBY010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 9159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9159
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1026212"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..2553)
                     /locus_tag="VIT19_07365"
     CDS             complement(160..2553)
                     /locus_tag="VIT19_07365"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEY5838837.1"
                     /translation="MKRITFSLILASLVVGFFAYSSSRPAQAANVASEGVPYTTDWRI
                     TGPSGGDVRALVIDPNDPTRFYFGTLDGQIYTSADGARTWRLLANFIRPQLFVDNIVI
                     DPRDSKVIYVATHRHKEPGGFYKSTDRGLTWNQSDELKNQAIHSLIQSRQNRDLLFAG
                     TNTGVWRSLDAGRSWKQLPTTGMTNINIESLAIDPRDDKVIYAGSWHLPFKTTDGGQT
                     WRVTNNGIIDDSDVFAIDINERDANHIIASACSGIYETRNAGDSWKKIQGIPSQSRRT
                     RAILQHPTIPGLVFAGTTEGFWRSAKGGENNSWMVTTSRQLEINSIAVHPETPNDIYI
                     ATNNYGVMVSRDGGKTFVPTNSGFSGRFVNTIIHDREQPNRVYATTINTTTGGGFFFV
                     SNDGGATWQPSMRNMPPRLIGYAILQDEGNANTIYLGTNLGVYRSLDRGATWSTVIGK
                     KKPAAPKKRVAPRTTARRPAPSRNTAARTQPPASTPGERIVAAPPQAANDVVRKAQEA
                     LDRAGYQVGVADGQMGQRTIAAIKRFQADRYLAVTGKLDQTTIAALGVGSVASNLSAH
                     VTTLTEPVNSLVSFSDGSGKLGMLAATNGGLYRTFDPTHGWDRVNYGRGYDARTSAIS
                     ASAQNPRLVFVGTTSSGVLASRDGGETWQQLAGVPTNSPINIIVQDPFRATHIYVGTK
                     TAFYLSHDGGQNWSRRGGDLPFGDFSSILINPRNTNEIFAGNAYQNGATGGGVYRSAN
                     AGQTWTRIDLRELRLPSMRIWALALDPRDQSTLFVGSHSAGVYLVSRGAEASVNTLP"
     gene            complement(2798..5383)
                     /locus_tag="VIT19_07370"
     CDS             complement(2798..5383)
                     /locus_tag="VIT19_07370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838838.1"
                     /translation="MRLANRVLLCALAIFVLASVASAQTLRNENDPRNQSPSVGTGGP
                     VGGPTGLFTIYDGSTLRKGEFTFSIAYSNYDRDPGDVDIADVPLSFNVGLNDHLEIFF
                     NTNAYRGIKVNNPRNLSSFYLPNSQLKFPFLGSGPAIVLAPNVSGPSALNTISGTAVF
                     RPAFNQPFVQYPFVGGSAGGFGQGPGPPPGPGNPFGTGFGCPGGINLPPTLGCFFNLG
                     VSPQPNSGSFSGADNFPGIGSTVGGILPGIVLHTATLPATALTLPITVPVNYTVEPSY
                     LPDAPFVNRLYGESSFNNLVFGAKWRFTGPNNPLGVGVIPFYRWWMDKGDDAAGFNQM
                     QRGAGPGGDIGDFGLILFVDGRLSRSVNVSANLGYILNSNPKGVFGGTEAVMLDRPDE
                     IIAGVGFDFPINKYFQPVLELRSTQYAGGRTPNAFENSPVDALAGVKIYPRRWFGFGL
                     AYRMHINQQDRSSFEGTDFNRRINQITNVNPAGPQGLTVIPSTTRPATIGSFPAGFTP
                     SDDANGFIAQFWIGHRNAREPDVLPNQAPVISSFAASTSSITVPCPPGMVSDTCPTTP
                     TTSVGLTTTATDPDGDTLLYTYSTTGGRITGDGPNATWDLSGLAPGTYTASVEVDDGC
                     GCISFSSTTVTITECRDCRNPLTCPTVGVTCPSDVDEGQPATFTANFSQGTPTVSETY
                     NWTVSSGTITSGQGTSSITVDTTGVGGGSVTATVEVGGVDPSCNRTASCTVQVRQRVG
                     PRKFDEYGNIRFNDEKARLDNYAIQLQNAPTDRATIIGYGACEGEGLNRANRAKDYLV
                     NTRGIDAGRIDTVDGGCRSELHVELWLVPSGATAPAADMSGAVSPCPECKRPARRGRR
                     GRGDE"
     gene            complement(5956..7236)
                     /locus_tag="VIT19_07375"
     CDS             complement(5956..7236)
                     /locus_tag="VIT19_07375"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEY5838839.1"
                     /translation="MSTALVDDIKEIKESNPFESMMSRFDRAAQLLNLDSDLYAVMRV
                     PNRELKVYIPTRMDSGRIQVFEGFRVQHNFARGPAKGGIRYAPDVNLDEVRALAAWMT
                     WKCAVVNVPFGGAKGGIICDPSLMSQGELERMTRRYAAELLDFIGPEKDVPAPDMNTN
                     EQTMAWIMDTYSMHARHTVTAVVTGKPIDLGGSRGRREATGRGILIVVQEACKRFQMD
                     PKNTRVVVQGSGNVGGIGALLMHEAGFKVVAISDVHGGIYRSEGLDMPAAMKHLQNTK
                     SFEGFSGAQPVSNSELLELDCDVLVPAATENQITSQNAERLKCKILAEGANGPTTAGA
                     DEILYRKGIFVIPDILANAGGVTVSYFEWVQDRMGYFWREDVVNERLQDTMVASFNDL
                     CRYADAHSVDTRTAAYMLAIDRVAYDTRMRGIYA"
     gene            7446..8825
                     /locus_tag="VIT19_07380"
     CDS             7446..8825
                     /locus_tag="VIT19_07380"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5838840.1"
                     /translation="MLCFATVPQSHAQTLNQEDDPIKLFERAQDAHAKNDYKTAIEFY
                     DAAIRLKPEFPEAEFQRALALLFTNSKDEALTGFNRAVELRPDWGFAHARFGSLLSSY
                     YNDDRNGEPILRRAIELESQNVEALVALAEVRARAGDLNEALALSKRATASKEANSST
                     WRKRSFIESRAGDKIAALASLDKALIIDSGDLGARHDRAKLRLDVGDNVGALDDIRVL
                     DRASHGSDVAGSFELARFYDRVGARDDALRILDALPEKDRQIPEVVALRAEIAGGDGS
                     TAEQRAALEQLLERDPKNASLLARLGATYRRIDPLKSQDYFYRALKLEPANSRFAIGY
                     AAALIQGRRFAEAVPILREVIARTPTEYLAHANLALALYELKDFRAAITEYEWIATVR
                     PELAPTYFFLATAHDNLQQYPEALAAYEKFLARADATNNQLEIDKVNLRLPVLRAQIK
                     RGQGRRKVG"
     gene            8852..>9159
                     /locus_tag="VIT19_07385"
     CDS             8852..>9159
                     /locus_tag="VIT19_07385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838841.1"
                     /translation="MRTTFAQTFSVLFVALASPLLSFEVFAQPLTPQLPTPPPMRVIA
                     REDKSQLTTTRDAKARVKLTIELADARLAHMEALTSHKEFEKASEALGTYLGLIEDAM
                     R"
BASE COUNT         1970 a         2671 c         2589 g         1929 t
ORIGIN      
        1 aaaggaggtt tcagtttcga tttccgtcgt gcccgtagtc tcccgcattg gtccgactat
       61 caccgatcgc gtgaccggat gttcggaatt tacacgtcgc cccgactgag tgtcaaggcg
      121 acggaaaatt cgtttctgcc ggaaaggttt tgggaaagtc taagggagcg tgttgaccga
      181 ggcttcagcg ccgcgcgaga ccagataaac acccgcagaa tgcgaaccga cgaagagcgt
      241 gctttggtcg cgcggatcca aagccagcgc ccaaatacgc atgctcggta gacgcagttc
      301 acgcagatcg atacgcgtcc aggtctgacc cgcattcgcc gaacgataga ccccgccacc
      361 cgtggcgcca ttctgataag cgttaccggc gaagatctcg ttcgtgttgc gtgggttaat
      421 cagaatgctc gagaagtctc cgaacggaag atcgccacct cggcgcgacc agttctggcc
      481 gccatcatgt gacagataga aggcggtctt cgtgccgaca tagatgtgcg tcgcgcggaa
      541 cggatcctga acgatgatgt taatgggcga gttcgtcggg acgccggcga gctgttgcca
      601 ggtttcgccg ccatcgcgtg aggcgagcac accggaactt gttgtgccca cgaagacgag
      661 acgcggattc tgagcgctcg ccgagattgc gctggttcgc gcgtcgtaac cgcggccata
      721 gttcacccga tcccagccgt gcgtcgggtc aaacgtgcga tacaggccgc cattggtggc
      781 cgccagcatg cctagttttc ccgaaccgtc tgagaatgaa accagagagt taaccggctc
      841 ggtcagggtc gtgacatgcg ccgaaagatt cgacgcgaca ctgccgacgc ccagcgcggc
      901 aatcgtagtt tgatcgagct tgccggtcac cgccaggtat ctgtccgcct ggaaccgttt
      961 gatcgcggca attgtgcgtt ggcccatctg tccgtccgct acgcccactt gataacccgc
     1021 gcgatccagg gcttcctgcg ccttacgcac gacatcatta gcggcctgcg gaggagcagc
     1081 aacgattcgt tcgccgggtg tgctggccgg aggttgcgtg cgcgccgcgg tgttgcgcga
     1141 cggcgccggc cggcgagcgg tcgtgcgcgg agctacacgc ttcttcggcg cggctggttt
     1201 tttctttccg ataaccgtgg accacgttgc gccgcgatcc agcgagcgat aaacgccgag
     1261 attggttccc aggtaaatcg tgtttgcatt gccctcgtcc tgaaggattg cgtaaccaat
     1321 caaacgcggc ggcatgttcc gcatcgacgg ctgccaggtc gcgccgccat cgttactgac
     1381 gaagaagaat ccgccgccgg tcgtggtgtt aatggtcgtc gcatagaccc gattcggctg
     1441 ctcgcgatca tgaatgatgg tgtttacaaa gcgaccgctg aatccagagt tggtcggaac
     1501 gaaggtcttt ccgccgtcgc gtgacaccat gacgccataa ttgttcgtgg caatgtaaat
     1561 gtcattcggt gtttccgggt gaaccgcgat tgagtttatc tccaattgtc gcgacgtcgt
     1621 caccatccac gaattgttct cgccgccttt agccgatcgc cagaaacctt cagttgtgcc
     1681 ggcaaagacg aggcccggga tagtcggatg ctgcaaaatc gcgcgcgtcc ggcgcgactg
     1741 tgacggaatg ccctgaatct tcttccatga gtcacccgca ttcctggttt cgtagatacc
     1801 gctgcaggct gacgcgataa tgtgattggc gtcgcgttcg tttatgtcga tcgcgaacac
     1861 atccgaatcg tcaatgatgc cgttgttcgt cacgcgccac gtttggccac cgtccgtggt
     1921 tttgaaaggc agatgccacg aaccggcata gatgaccttg tcgtctcgcg gatcgatggc
     1981 cagggattca atgttgatgt tggtcatgcc ggttgtcgga agttgcttcc agcttctgcc
     2041 ggcgtccagc gatcgccaca cacccgtgtt cgtcccggcg aaaaggaggt cacgattttg
     2101 gcgtgactga attaatgagt gaatcgcctg gttcttgagc tcgtccgact gattccaggt
     2161 cagaccgcga tccgttgatt tgtagaagcc acccggttct ttgtggcggt gcgtggcaac
     2221 gtagataacc ttcgaatcgc gtggatcgat gacgatgtta tcgacgaaaa gctgcgggcg
     2281 aatgaaattt gcgagcagcc gccaggtccg cgcgccgtcc gcagacgtgt agatttgccc
     2341 atccagcgtg ccgaaataaa aacgcgtcgg atcgttcgga tcgatcacca gcgcgcgcac
     2401 gtcaccgcca ctgggaccgg tgattcgcca atcggtcgtg taaggcacgc cctcgcttgc
     2461 gacatttgcc gcctgcgccg gacgggaaga cgagtaagca aagaagccaa ctacaaggct
     2521 ggccaaaata agactgaagg taattctttt cattgaggtc gattctcttt cgctagtaag
     2581 tcctaagtaa tcggtactgc aggggcatcg gtcgtccgca ttataaccgt ttgcggaact
     2641 cttttcgata cttggatgcg cgttttcgat gtctttcccg tttaggcgtg gagagaaatg
     2701 cggaaaaaac gaaatgggcg atgcgtcctt tcggaagcac cgcccatgtt cggaagaagg
     2761 tcgcggtccc gattactcgg aacagcgaac gttcaagtta ctcgtcaccg cgtccgcggc
     2821 ggccacgacg tgccggccgc ttgcattccg gacaaggtga aactgcgccg ctcatgtctg
     2881 ccgcaggtgc agtcgcaccg gacggaacca gccagagctc aacatgcagc tcagaccggc
     2941 atccaccgtc gaccgtatcg atgcgaccag catcgatacc gcgggtgttc acgaggtaat
     3001 ccttggcgcg gttcgcacga ttcaggcctt cgccctcgca tgcgccgtag ccaatgattg
     3061 ttgcgcggtc agttggagcg ttctgcaact gaatcgcata gttgtcgagt ctggctttct
     3121 cgtcgttgaa acgaatgttg ccgtactcgt cgaacttgcg gggtccaacc ctctgtcgga
     3181 cttgcaccgt gcaggaggct gtgcggttgc aactcgggtc cacgccaccg acttcaacgg
     3241 tcgcggtgac tgagccacca ccaacaccgg tcgtatcaac ggtgattgag ctggtgccct
     3301 gaccactggt gatcgttccg gatgagactg tccagttgta ggtctcagag acagttggcg
     3361 tgccctgcga gaagttcgca gtgaacgttg ccggttggcc ctcatcaaca tcactcgggc
     3421 aagttacgcc aaccgtcgga caagtcagcg ggttgcggca gtcacggcac tcagtaatcg
     3481 tcaccgtcgt cgaagagaag ctgatacagc cgcagccgtc atccacttcc accgacgccg
     3541 tgtacgttcc cggagccaga ccgcttagat cccaagtcgc attcggccca tcaccggtga
     3601 tgcggccgcc agtcgtgctg tacgtgtaga gcagcgtgtc gccatcagga tcggtcgccg
     3661 tggtggtcag accgactgaa gtcgttggcg tcgttgggca tgtatccgaa accattcccg
     3721 gcggacaagg tacggtgatt gacgacgtcg acgccgcgaa tgaactgata accggcgcct
     3781 ggttcggcag cacgtccggt tcgcgggcgt tgcggtggcc aatccagaac tgcgcgatga
     3841 agccattcgc atcatcagac ggcgtgaagc cggccggaaa actgccaatc gtcgccggac
     3901 gggtcgtgga tggaatcacg gttagcccct gaggtccggc tggattaacg tttgtgatct
     3961 ggttaattct ccggttgaag tccgtaccct caaatgacga acgatcttgc tggttgatgt
     4021 gcatgcggta cgccaagccg aagccaaacc agcgtcgcgg ataaatcttg acgccggcca
     4081 acgcatcgac cggactgttc tcaaacgcgt tcggcgtacg gccaccggca tattgcgttg
     4141 agcgcagttc cagcactggc tggaagtact tgttgattgg gaaatcaaag ccgacaccgg
     4201 cgataatctc gtccggccga tcgagcatca cggcctcagt ccctccgaac acacccttcg
     4261 ggttgctgtt cagaatatag ccgaggttag ccgagacatt cactgagcgg cttagacgcc
     4321 catctacgaa caatatcagg ccaaagtcac cgatgtctcc accgggaccg gcgccgcgct
     4381 gcatttgatt gaagccggcg gcgtcatcgc ccttgtccat ccaccatcga tagaacggga
     4441 taacaccgac gcccagcgga ttgttcggac ccgtgaagcg ccacttggcg ccaaacacca
     4501 ggttgttgaa gctcgactcg ccgtaaaggc gattcacgaa cggcgcatca ggcagatagc
     4561 ttggctcgac cgtgtagttc acaggaactg tgatcgggag agtcaaggca gtcgccggaa
     4621 gcgtggcagt gtgcaaaacg attccaggaa gaatgccgcc caccgttgag ccgattcccg
     4681 ggaaattgtc cgcgccacta aagctcccgc tgttcggttg cgggcttaca cccaaattga
     4741 aaaaacaacc gagcgttggc ggcaggttaa tgccacccgg acatccgaat cccgtgccaa
     4801 acggattgcc gggccccggc ggcggtcccg gaccctgacc gaagcctcca gccgagccgc
     4861 ctacaaacgg atactgcaca aatggctgat taaaggcggg acgaaaaact gcggtaccgg
     4921 aaattgtgtt aagggcggat ggaccgctca cattaggagc caacacgatg gccggaccac
     4981 tgccaagaaa tggaaacttc agctgcgagt ttggcaggta gaagctcgac aggttccgcg
     5041 ggttgtttac cttaatgccg cgataagcgt ttgtgttgaa aaagatttcc agatggtcgt
     5101 tcaaacccac gttaaagctg agcggcacat ctgcgatgtc cacatcacct ggatcgcggt
     5161 cgtagttact gtaggcgatg ctgaatgtaa attcgccctt acgcaacgtc gaaccgtcgt
     5221 agatagtaaa cagtcccgtg ggcccaccta ccggtccgcc ggtgccaacc gacggcgact
     5281 ggtttctggg atcgttttca tttctgagcg tctgcgcaga cgccacggat gccaaaacaa
     5341 aaattgcgag cgcacaaagg agcactctat tcgcgagtct catcgcgttc ctcctgcggt
     5401 aatgtgaaag ttttctcggg gccgaatccc catggtgagc gagctgagcg gccgcatctt
     5461 tatgtgattt gtgaaatgct cgaagcatgc gtcgccagtt aactccaggg gataaggacg
     5521 ctcgaactgc agcgtcagcg agaacgttta gctaaaacta attcccatca aacacggtaa
     5581 attgcgctga gggtatttcc gagaggcgtc gaaccaacgg cttgtcgcgc ctcttcataa
     5641 cctttaaagc cggatatcta gcgctactta taaggaaact aagcgccagt gtcaactaag
     5701 atttcgtaga acgcgcaccc gccagccgtt gtgaacgatc tggacccgtc accatctctt
     5761 gaaatccgac gcgaagacta tcactgccat cttgcgaaat caagagtttt tcacgactta
     5821 gcgcgagttt gaatatgttt tttcagtcac gtgtggccct gaattccgtg gacttgtcag
     5881 aactgcaacg gcccgccgtc aaatccgcgc ggccgcccat gcgtaccatc cgtccgacct
     5941 gccgcctggg acactttacg cgtaaattcc gcgcattcgt gtatcgtagg cgacccgatc
     6001 aatagccaac atgtacgcag cagttcgtgt gtccactgag tgggcatcgg cataccggca
     6061 aaggtcattg aagctcgcca ccatcgtgtc ttgcagccgc tcgttgacaa cgtcttcgcg
     6121 ccagaaatag cccatgcggt cctgcaccca ctcaaaatac gaaacggtta cccctccggc
     6181 attggccagg atgtccggga ttacaaagat gcccttccga taaaggatct catcagcgcc
     6241 ggccgtcgtc ggcccgtttg ccccttcggc gaggatctta catttcaagc gttcggcgtt
     6301 ctgagaagta atctggtttt cagtcgccgc cggcaccagc acgtcacaat ccaattccag
     6361 aagttctgaa ttgctgacgg gttgcgcgcc cgaaaatcct tcgaatgatt ttgtgttctg
     6421 tagatgcttc atcgcggccg gcatgtcgag cccttcggac cggtaaatgc cgccgtgaac
     6481 gtccgagatg gccacgactt tgaatccagc ttcgtgcatg agcaacgcac cgatgccgcc
     6541 cacgttgccg cttccctgaa ccacgacgcg agtgttcttc ggatccatct ggaaacgttt
     6601 gcacgcctcc tggaccacga tcaggatgcc gcggccggtg gcttcccgac ggccgcgcga
     6661 tccgccgaga tcgatcggct taccagtcac cacagcggta acggtgtgac gcgcatgcat
     6721 cgaatacgtg tccatgatcc acgccatcgt ctgttcattc gtattcatgt ctggcgccgg
     6781 cacgtctttt tcaggcccga tgaaatcaag cagctcagcc gcgtaacgtc gcgtcatgcg
     6841 ctcaagctca ccctgtgaca tcagacttgg atcgcagatg atgccgccct tcgcgccccc
     6901 gaaaggaacg ttcacgaccg cgcacttcca cgtcatccac gccgccagcg cgcgcacctc
     6961 gtcgaggttt acgtccggcg cgtaacgaat gccgcctttc gccgggccgc gcgcaaaatt
     7021 gtgttgcaca cgaaatcctt cgaacacctg aatgcgtcct gagtccatgc gcgtcggaat
     7081 gtaaaccttc agttcccggt tcggaacgcg catgacggcg taaaggtcgg aatccaaatt
     7141 cagtaactgc gccgcccgat cgaatcgcga catcatcgat tcaaatgggt tggattcttt
     7201 tatctctttg atgtcatcga caagtgctgt actcatgaca gtgctccgct taaaagatgt
     7261 gcaaaacgtc cgaaggattt ctgatttcgg gatgttaacg catggaataa ggcggcgcaa
     7321 ccggaggttt tccggctggg acgcaacgct cacgggcgtg ctaacatcgt agctcacgac
     7381 cggtcggcag taaccacctg atgaaagcgc ggcagctaac taagtgggga tggggagtgc
     7441 tcttgatgct ctgcttcgcc acggtccctc aatcgcacgc tcagactctc aatcaggaag
     7501 acgatcctat caaactgttc gagcgcgccc aggacgcgca cgccaaaaac gattacaaaa
     7561 cggcgattga gttttacgac gcagcgatcc ggctaaagcc cgagtttccc gaagccgaat
     7621 ttcaacgcgc cctggctctg ctcttcacta atagcaagga cgaagcgttg actggtttca
     7681 atcgtgcggt tgagttgcga cccgattggg gattcgcaca cgcacgattc ggctcgctct
     7741 tgtcctctta ttacaacgac gatcgaaatg gtgagccgat tctgcggcgt gcgattgaac
     7801 tggaaagcca aaacgtcgaa gcactcgtgg cgctggccga ggtgcgggcg cgggcggggg
     7861 atctcaacga agctctcgcc ttgagcaagc gcgccaccgc ctcaaaggag gcgaattcat
     7921 caacctggcg caagcgctcg ttcatcgaat cacgcgcggg tgacaagatc gccgcgctcg
     7981 cgagtctcga caaagcttta ataattgatt caggcgatct gggcgcgcgt catgatcgag
     8041 cgaagctgcg actcgacgtc ggcgacaacg tcggtgcgct cgacgacatt cgtgttctcg
     8101 atcgggcgag ccacggtagc gatgtcgcag gctcttttga actggcccgg ttctatgatc
     8161 gtgtcggcgc gcgtgatgac gctttgcgca tactcgacgc gctgccggaa aaagatcgac
     8221 agattccaga ggtggtcgcg ttgcgagctg agattgccgg cggcgatggt tcgaccgctg
     8281 aacagcgcgc ggcgcttgag caattacttg agcgcgatcc aaaaaatgct tcgctgctcg
     8341 cgcgactcgg agccacgtac cggcgcatcg atccgttaaa gtcgcaggac tatttctatc
     8401 gcgcgctgaa actcgagccg gcgaattcca ggtttgcgat cggctatgcc gcggcgctca
     8461 ttcagggtcg ccgcttcgct gaggcggtgc cgatcctccg cgaagttatc gcgcgcacgc
     8521 cgactgagta tcttgcgcac gccaacctcg cgctcgcctt gtacgagctg aaagatttcc
     8581 gcgccgcaat tacagagtac gaatggattg cgacggtgcg cccggaacta gcgccaactt
     8641 actttttcct ggcgacggcg catgataatc tgcagcagta cccagaagcg ctcgccgcct
     8701 acgagaagtt tctcgcgcgc gccgacgcaa ccaacaacca gctcgaaatc gacaaggtca
     8761 acttgcggct ccccgttctg cgagcgcaaa tcaagcgagg ccagggaaga cgcaaagtcg
     8821 ggtaggacag caaatcccaa cgccagaaca aatgcgaact acattcgccc aaactttctc
     8881 agttctattc gttgcactcg ccagtcctct gctctcattc gaagtctttg cccaaccgct
     8941 gacgccgcaa ctgccgactc cgccgccgat gcgcgtcatt gctcgcgagg acaaatcaca
     9001 gctcaccacc accagggacg cgaaggcacg cgtcaagctc accatagaat tggccgacgc
     9061 gcgtttagca cacatggaag cgttaacgtc gcacaaggaa ttcgagaaag cttccgaagc
     9121 cctcggcacc tatctggggc taatcgaaga cgcgatgcg
//
LOCUS       DATDBY010000395         2291 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1484514, whole genome shotgun sequence.
ACCESSION   DATDBY010000395 DATDBY010000000
VERSION     DATDBY010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484514"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..287)
                     /locus_tag="VIT19_07390"
     CDS             complement(<1..287)
                     /locus_tag="VIT19_07390"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY5838842.1"
                     /translation="MPVEFPERFNMADYFLYHNLEEGRENKTCLYFKDQTYTYGDAAR
                     MSNCMGNALRELGVEMEDRVLIVLPDCPEFVWTWFGAARIGAVITMVNPLLP"
     gene            complement(302..1159)
                     /locus_tag="VIT19_07395"
     CDS             complement(302..1159)
                     /locus_tag="VIT19_07395"
                     /inference="COORDINATES: protein motif:HMM:NF015272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase family protein"
                     /protein_id="HEY5838843.1"
                     /translation="MSTEYGKDAPLSYNDYLRVQELIELQTCRSSPAHHDELLFITVH
                     QAYELWFKQILHEIDATLRLMNADRTGEAASAMKRVVEIEKLLVTQIHILETMSPISF
                     LGFRDELNPASGFQSMQFREIEFASGLKHESVARAFKDDEFAGKRLQARLDAPALGDA
                     FFALLRRAGFDAPAADEQQSEDDQRSSTGRRVRAIIEILTHPEKLYKEYQLAEALLEH
                     DEYFALWRSHHIKMVERMVGTKKGTGGSEGVGYLKTTLDHKFFPELWEARTYLSTQHG
                     DTGCPFAKT"
     gene            complement(1203..1802)
                     /locus_tag="VIT19_07400"
     CDS             complement(1203..1802)
                     /locus_tag="VIT19_07400"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEY5838844.1"
                     /translation="MTPADRLKQFTDSSHFIATIVSEAEKNNATASDLVRGLTEQQLN
                     WKPDATQWSIAQCLEHLAVTSRQFNSYFKQLIESARLKWPTNGAIPYRPSLVGGLLIK
                     QVVPETTRAFPAPKVFKPSDSSSIQDALALFLKQQEDFVRFVRESEGVDYNRARLRSP
                     VTPLMRYSLADAFVVTIVHGYRHLAQANRVKAMPNFPNT"
     gene            complement(1799..>2291)
                     /locus_tag="VIT19_07405"
     CDS             complement(1799..>2291)
                     /locus_tag="VIT19_07405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838845.1"
                     /translation="DQLEPKTTGWMAHEHPFAFEAEMHYAPNVTRFLHGSPAIPALYA
                     AQSGYKVINEIGVALIREKSMRQTGALIELAEEAGFRVTSPRDPAQRGGTITVWDDNA
                     AEITKELVRREFIVDYRPGAGVRISPHLYTKDEELGLIIAEMKKIRDNREYQTAGKAG
                     AAF"
BASE COUNT          452 a          639 c          664 g          536 t
ORIGIN      
        1 ggcagcagcg gattaaccat cgtgatgacc gcgccaatgc gcgcggcgcc aaaccaggtc
       61 cagacaaact caggacagtc cggcaggacg atcagcaccc ggtcttccat ctcaacgccg
      121 agttcgcgca gagcgttgcc catgcaattc gacatgcgcg ccgcatcgcc gtacgtgtaa
      181 gtttgatcct tgaagtagag acaggtcttg ttttcgcgcc cttcctccag attgtgatag
      241 aggaagtaat cggccatgtt gaagcgttca gggaattcga caggcatgat ttcggtgagc
      301 gtcaggtttt agcaaatgga catcccgtgt cgccgtgctg cgtgctgaga tacgtccgcg
      361 cttcccacag ctcgggaaag aatttgtggt caagcgtcgt cttcagatag cccacgccct
      421 ccgacccgcc ggtccctttc ttcgtaccaa ccatgcgctc aaccatcttg atgtgatgcg
      481 aacgccagag cgcgaaatat tcatcgtgtt cgagcagcgc ttcggctaat tggtattcct
      541 tgtagagctt ttccgggtgc gtcaggatct caatgatcgc gcgcacgcgg cgaccggtac
      601 tgctgcgttg gtcgtcttca ctctgttgct catcggcggc gggcgcgtcg aatcccgccc
      661 tgcggagcag ggcgaagaat gcatcgccga gcgcaggcgc atccagtcgc gcttgcaaac
      721 gcttgcccgc gaactcgtca tccttgaatg cgcgcgcgac cgattcgtgt ttcaagcctg
      781 aggcaaattc aatctcgcga aactgcatcg actgaaaacc gctcgccgga ttcaattcat
      841 cgcgaaagcc gaggaagctg atcggcgaca ttgtttccag gatgtgaatc tgcgtaacca
      901 gcagcttctc gatctcgacc acgcgcttca tcgctgaggc tgcttcgccc gttctgtctg
      961 cattcatcag acgcagggtc gcgtcgatct cgtgcagaat ctgcttgaac caaagctcgt
     1021 acgcctgatg gacggtgatg aaaagcagtt cgtcgtgatg cgcgggtgac gatcgacacg
     1081 tctggagttc gatcaactcc tgcacgcgca ggtaatcgtt gtatgagagc ggagcgtctt
     1141 tgccgtattc ggtggacata ttgaagtggc gaagctaact tgcgcgcaaa attaccattg
     1201 ctctacgtgt tcgggaaatt gggcattgct ttgacgcgat tggcctgggc gaggtgccgg
     1261 tagccgtgga caatcgtgac cacgaacgcg tccgcgagac tgtagcgcat cagcggcgta
     1321 accggtgaac gcagacgcgc gcgattgtaa tcaacgcctt cactctcgcg cacaaagcgc
     1381 acgaagtctt cctgctgctt aagaaataac gcaagcgcat cctgaatcga tgacgagtca
     1441 gacggcttga agacctttgg tgctggaaat gctcgcgtgg tttcggggac gacttgcttg
     1501 atcagcaagc cgccgaccag gctgggccgg tacggaatgg cgccgttcgt cggccacttc
     1561 agacgcgcgc tttcgattaa ttgtttgaag tagctgttga actgcctgga cgtgaccgcc
     1621 agatgctcaa ggcattgcgc gatgctccat tgtgtcgcat caggcttcca gttgagctgc
     1681 tgttcggtaa gtccgcgaac caagtcactc gctgtcgcgt tgttcttctc ggcttccgag
     1741 acgatcgtgg cgatgaagtg agacgagtcg gtaaattgct ttagtcgatc cgctggtgtc
     1801 aaaacgcagc tcctgctttt cctgccgtct ggtattcacg gttgtcgcga atctttttca
     1861 tctcagcaat gatcaatccc agctcttcgt ctttcgtgta caagtgcggt gagatgcgca
     1921 cgcccgcgcc gggacggtaa tcgacaatga attcgcgtcg aaccagttct ttggtgatct
     1981 cggcggcgtt atcgtcccaa actgtaatcg tgccgccgcg ttgagcgggg tctcgcgggc
     2041 tggtgacgcg gaagccggct tcttcggcta attcgatcaa cgctccggtc tgacgcatgc
     2101 tcttctcgcg aattagcgcg acgccgattt cgttgattac tttgtagccg gattgcgccg
     2161 cgtaaagtgc cgggatcgcc ggcgagccgt gcagaaaccg ggtgacgtta ggcgcgtagt
     2221 gcatttcagc ttcgaaggcg aacgggtgct cgtgcgccat ccagccggtc gtttttggct
     2281 cgagctgatc g
//
LOCUS       DATDBY010000396         3567 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_971681, whole genome shotgun sequence.
ACCESSION   DATDBY010000396 DATDBY010000000
VERSION     DATDBY010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3567
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_971681"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            58..708
                     /locus_tag="VIT19_07410"
     CDS             58..708
                     /locus_tag="VIT19_07410"
                     /inference="COORDINATES: protein motif:HMM:NF027591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4919 domain-containing protein"
                     /protein_id="HEY5838846.1"
                     /translation="MIRKSLVSVFLFLMLAVSAGAQTQSTPSPSPSPKSSPAAKGKYE
                     SLLERVKKGDRTIDFTELRLAFYESSNYNPYAPMLTYRPLWGALAQNNYAEAIKISQS
                     VFEKNFIEVNANMVAHVAYRETGDTERAAFHRFMADGLLASIKSNKDGKTPETAYEVI
                     SVSEEYGLMRSLELRPIKQSLINDKGHFIDALVVLDKTNQESTVFFNIDKPFTWKK"
     gene            896..1582
                     /locus_tag="VIT19_07415"
     CDS             896..1582
                     /locus_tag="VIT19_07415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838847.1"
                     /translation="MLFAAAAAGVAAQPAGGKTTTPETKPKTNSSSSTPKPTKPTKPT
                     TPSSSKRPNTAPASIDGKWWTSGNDFGASEVVFTQTGANVTGVIRYSDGRTGTVNGTM
                     VNKRLQFTFSSSDGNSGSGWLELSWNNFLGGPWRNARVRDGSWTMMRIEGKWCFGGSR
                     SRIRTVTHDQRGDMFVIAEDGTRSTGQLQGPWIYLTSDDGITIKGDTDFRANRINWST
                     GFFWTWCGRN"
     gene            1692..2384
                     /locus_tag="VIT19_07420"
     CDS             1692..2384
                     /locus_tag="VIT19_07420"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047689 - aspartate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HEY5838848.1"
                     /translation="MKRVGIIGGIGPESTVEYYQYIIAGYRERTNDGSYPSIVINSVD
                     LDRLVKWINADEMDPFTDYLVAEVERLERANVDFAVLAANTAHIVFDQISARTSLPLV
                     SIVEATRDKVQALGLKRPGLFGTGFTMRARFYKDTFAKIGRPVITPNEEEKAFIHEKY
                     FGELLKSVFLPETRTRLLEIVDRMRERDNIDGLILAGTELPLILRASEHNGIPLLDTT
                     KIHVAKIIDELL"
     gene            2401..2871
                     /locus_tag="VIT19_07425"
     CDS             2401..2871
                     /locus_tag="VIT19_07425"
                     /inference="COORDINATES: protein motif:HMM:NF020397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HEY5838849.1"
                     /translation="MKHSPPRDLVKFLQPYDRDIRNLALQLRALVLEEMAPCYENIYD
                     AYSAVAIGYGTSERLSDGVLHIAVYSKHVNLGFNDGATLNDGKGILQGKGNRIRHITI
                     KTIEDLSKPEIRSYIRRAKRRTSADARKLGETAKKTKGVISAVKAVYAKKRRPR"
     gene            2940..3224
                     /locus_tag="VIT19_07430"
     CDS             2940..3224
                     /locus_tag="VIT19_07430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838850.1"
                     /translation="MQFSFMVGITEPHRVDFSFDQFGGRLEIKVDGISIVDEVRTISV
                     SLTKRYDFVVGLAEKHHVTIEKQRKLLLAGIQPQQYRIFIDGQLVQTYEG"
     gene            complement(3353..>3567)
                     /locus_tag="VIT19_07435"
     CDS             complement(3353..>3567)
                     /locus_tag="VIT19_07435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838851.1"
                     /translation="SRRFTFGERYALIPTVEMFNTFNSKNRINSLSGAGNQNSLTAPS
                     LFDFSGFLRQGVGDPRQLQLSVKFVF"
BASE COUNT          898 a          941 c          955 g          773 t
ORIGIN      
        1 ctcttctgta aaatacgaaa tccccgataa tcatctgata gaaagttaaa actcaacatg
       61 atcaggaagt ctctggtatc tgttttcttg ttcttgatgc tcgcggtctc ggccggggcg
      121 cagactcagt cgacaccttc gccctcgccc tcgcccaaat cctccccggc agcaaaaggg
      181 aaatacgaat cactgctcga aagggtgaag aagggcgacc gcaccatcga ttttaccgag
      241 ctgcgactcg cgttttatga atcgtctaac tacaaccctt atgcaccaat gcttacctac
      301 cggcctctgt ggggcgccct cgcgcagaat aactacgccg aggctatcaa gatttctcag
      361 tccgttttcg aaaagaactt tattgaggtc aacgcgaaca tggtcgcgca cgttgcctat
      421 cgcgagacgg gcgacaccga gcgcgccgct tttcaccgat tcatggcgga tggattgctg
      481 gcctcgatca agtccaacaa agatggcaag acacccgaaa cggcttatga agtcatttca
      541 gtcagcgagg agtacggcct aatgcgctcg ctggaactgc ggcccatcaa gcagtcgctg
      601 attaatgaca agggacactt tattgacgcg ctcgtcgtcc tggataagac gaaccaagaa
      661 agcacggtct tctttaatat tgataagccg ttcacctgga agaagtagga ttaatgagat
      721 tgtcagttgt cagttgtcag ttgtcagttg tcagttgtac tacgaggttg tttcgacgaa
      781 tgattcgatt ttgattatct aaacaactga ccactgacta ctgactactg acttcatact
      841 cgtgtcgcac ccaactcgat acttcagagc attcttgacc ggctgtgtca taaacatgct
      901 tttcgccgcc gcggccgcgg gcgttgctgc tcaacccgcc ggcggcaaga ccacgactcc
      961 ggaaacaaag ccaaagacga actcgagcag cagcacgcct aagccgacaa aaccgacaaa
     1021 gcccacgacg ccgtcatcga gcaaacgccc aaacactgca ccggcatcga ttgacggcaa
     1081 gtggtggaca agcggcaatg actttggcgc gtcggaagtg gtctttaccc aaaccggtgc
     1141 taacgtcacc ggtgtaattc gttactctga cgggcgaacc ggcacggtca acgggaccat
     1201 ggttaacaag cgtcttcaat ttaccttcag cagttccgac ggtaacagcg gttcaggctg
     1261 gttggaattg agctggaaca attttctcgg cggcccgtgg cggaacgcgc gcgtccgcga
     1321 cggctcttgg acgatgatgc gcatcgaagg caaatggtgt tttgggggga gccggagccg
     1381 cattcggacg gtcacgcacg accaacgcgg ggatatgttt gtaatcgctg aagacggcac
     1441 ccgcagtact ggccagttgc agggcccttg gatctacctg acgtccgacg acgggatcac
     1501 gatcaagggc gatactgact ttcgcgcgaa ccgcatcaac tggtcgacag gatttttctg
     1561 gacgtggtgc ggcaggaatt agtaatcgtc agttgtcagt tgttagttgt cagttgtttc
     1621 gatgacgaga gtcgagtcac tatgcccaca aaattcttaa tgcgactgac cgctgacaac
     1681 tgactactga catgaaacga gtcggcatca tcggcggcat cgggccagag tcaaccgtcg
     1741 aatactacca atacatcatc gccggttatc gcgagcgaac gaacgacggc agctatccct
     1801 ccatcgtaat caacagcgtg gacctcgatc ggctggtcaa atggatcaat gccgatgaaa
     1861 tggatccttt taccgactat ctggttgcgg aagtggaacg gctcgagcgc gcaaatgttg
     1921 acttcgcagt cctggcggct aacaccgccc acattgtttt cgatcagatt agcgcacgta
     1981 cgtcattgcc gttggtgagc attgttgagg cgacgcgcga taaagttcag gcactcggac
     2041 tgaagcggcc gggactgttt ggaacgggtt ttacgatgcg cgcgcgattc tacaaggaca
     2101 cattcgcgaa aataggcagg cccgtcatta ctccgaacga agaagaaaaa gccttcatcc
     2161 acgaaaagta ctttggcgaa ttgctaaaga gcgtctttct gcccgagaca cgcacgcgct
     2221 tgctcgagat tgtcgatcga atgcgcgagc gagataacat tgacgggctg attctcgcgg
     2281 gaacggaact acctctgatt ctgcgcgcgt cagagcacaa cggcattccc ttgctcgaca
     2341 ccacgaagat tcacgttgca aagattatcg acgagttact gtagagcctg aaggcgtatc
     2401 gtgaagcatt ctccgccacg cgatctcgta aagtttctgc agccgtacga ccgtgacatt
     2461 cgcaatctcg cgttgcaact tcgggcgctc gtgctcgaag aaatggcgcc ttgttacgag
     2521 aacatctatg acgcgtacag cgccgtcgcc attggctacg gcaccagcga gcgcctgagc
     2581 gacggagttc ttcacattgc cgtctattcc aaacacgtga acctcgggtt caacgacggg
     2641 gcgacgctga atgatggcaa gggcattctg caaggcaagg gcaaccggat ccgacacatc
     2701 acgatcaaaa cgattgagga tttgagcaag ccggaaattc gttcttacat tcgtcgcgca
     2761 aagaggcgaa catctgccga cgcgcgcaag ttgggcgaaa cagcaaagaa aaccaaaggc
     2821 gttatctcag ccgtgaaagc tgtctatgca aagaagcgcc ggcccaggta agtccgaggg
     2881 gttacaaaag ctagtgtcgg tggctgctta gtgtataaac ggatttgaat tagaaagtca
     2941 tgcaattcag cttcatggtc ggcatcacgg aaccacaccg ggttgatttc tcgttcgatc
     3001 agttcggggg gcgtttggaa atcaaggtgg acggaatttc catcgtagac gaagtgcgca
     3061 cgatatcagt gagtctcacc aaacgatacg atttcgtcgt gggcctggca gaaaaacatc
     3121 acgtgacgat cgagaaacag cgaaagcttc tgctcgccgg gattcagccg cagcaatatc
     3181 gcatcttcat cgatggtcag ttggtgcaga cttacgaagg gtaataatct ctcggtacgc
     3241 acgcctccgg cgtgcttagc aggctggaag cctgcgtacc caacaaacaa aaaaggcgca
     3301 ggagccaagc ggcctctgcg cctttttcgt aatagtccgc aaccgacagt tgttagaaca
     3361 caaacttaac ggacaactgt agttgtcgcg ggtcccccac tccctggcgg aggaagccgg
     3421 aaaagtcgaa caggctgggc gcggttagtg aattctgatt tccggcgccc gacagcgaat
     3481 tgattctgtt cttagagttg aaagtattga acatctcaac ggtcgggatt aacgcgtaac
     3541 gctcgccaaa cgtgaaccgc cgcgaca
//
LOCUS       DATDBY010000397         3051 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2252672, whole genome shotgun sequence.
ACCESSION   DATDBY010000397 DATDBY010000000
VERSION     DATDBY010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3051
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2252672"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            103..1587
                     /locus_tag="VIT19_07440"
     CDS             103..1587
                     /locus_tag="VIT19_07440"
                     /inference="COORDINATES: protein motif:HMM:NF012927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase"
                     /protein_id="HEY5838852.1"
                     /translation="MKSLMWKFPNPIKHQIPETHWPTADQAGRSLLFQPIELGSLSLE
                     NRTWVPAMVPWRATEDGFVTQDNLDWYRRFAEGRPGALVVEATGVRDVASGPLLRIGD
                     DRFVPGLKKLVEAVREGSRGHTKLFIQIIDFLAVRRRPDPTKYFERFLKITSLHRQMI
                     AELTSDPRYLDGDETRSREFLKHASDEVLEHVLDEREIESLRFGYRERVTDTHLPQIN
                     ELPQVLPGIFADAAGRAREAGFDGVELHYAHAYTMAGFLSALNVRADGYGGERENRAR
                     LPLEVYRAVRDRVGRDYVVGVRFLVDEVIAGGNRIDDAAYFGVEFARAGFDYLSISKG
                     GKFEDAEQPKVGQAVYPYTGRSGYECMPTTLSDKRGPFGRSVPLVAEVKRAVNAAGFT
                     TPIVATGGITTFEQAEEILRNTDADIIGMARQALADPDWFQKVRLGRGEEVRRCTYTN
                     YCEALDQAHRQVTCKLWDRKELDGPAIALASDGRRRLLPPDWNE"
     gene            complement(1702..2409)
                     /locus_tag="VIT19_07445"
     CDS             complement(1702..2409)
                     /locus_tag="VIT19_07445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838853.1"
                     /translation="MTDETRAKLLHYLARFHFAYLITIPFLGLISWWFVRPSALAAVI
                     IAGFAPIAAYYSLQVERYHLTTHLPSALWVTISGPLLVLISSIRGGGIWFFFVGATFI
                     EIGGMCAGIIVGATVKGIREREYFYPGVLYVFMGAFIAVWGWLIWQAHAVFRWQDNIW
                     LIAALANETYGYSRMFISGDIDLYYGNTRAANRAGADWLRGPLKDEHGFALILVFAVI
                     IILSPFVIGLLKYAGKL"
     gene            complement(2412..>3051)
                     /locus_tag="VIT19_07450"
     CDS             complement(2412..>3051)
                     /locus_tag="VIT19_07450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838854.1"
                     /translation="GTNQLFHGLTLTFRESAAGVFAAHSYKFDKTTSTFIVECDAQTW
                     DQAGFATLPDEETRRYVGEVFARDLGGHLLLSNNSKWINFVLVKNANWQFENVVLLGD
                     SLHTAHFSIGSGTKLAIEDAITLKQSFDDAHDVSAALTRFEETRKPVIEDYQAAAYES
                     MVWFENARQYMHLSPIELAYSLMKRSGRVDDEALRKRDPNFVNDYERSRTSS"
BASE COUNT          705 a          831 c          849 g          666 t
ORIGIN      
        1 cgcctttgcg tgaacccgct tttcgattac aagccagact gatccaaagc gccgtcgccg
       61 ctacgctctg ccggcgcact ccaaatatgt gttcatgcta aagtgaaatc gctcatgtgg
      121 aagttcccca atccgatcaa acatcagata ccagaaacgc actggccgac tgctgatcaa
      181 gcgggtcggt cgctgctgtt tcaaccgatc gagcttggtt cgctgtcgct tgaaaaccgg
      241 acatgggtac cggcgatggt gccctggcgc gcgaccgaag acgggttcgt tacccaggac
      301 aatctggatt ggtatcgccg atttgcggaa ggacgaccgg gagcgctcgt cgtcgaagct
      361 accggggttc gcgacgttgc cagtggtccg ctactgcgca ttggtgatga tcgattcgtg
      421 cccggattga agaagctggt cgaagcggtg cgcgagggaa gccgtggtca cacaaagctt
      481 ttcattcaaa tcattgattt tctggccgtc agacgccggc ccgatccaac gaagtatttt
      541 gaacgattcc tgaagatcac atcgctccat cgtcagatga tcgccgagct cacgagcgat
      601 cctcgatatt tggacggtga tgaaacccgt tcacgcgaat ttctgaagca cgcttcggac
      661 gaagtgttgg aacacgttct tgatgagcgc gaaattgaat ctctccgctt cggctatcgc
      721 gaacgagtca ccgacacgca cctgccgcag attaacgaac tcccgcaggt cttgcccgga
      781 atctttgccg atgccgcagg ccgagcgcgt gaagccggct tcgacggcgt tgagcttcac
      841 tacgctcacg catacacgat ggcgggcttt ctcagtgcgc tgaatgttcg cgccgacggc
      901 tatggagggg aacgtgagaa tcgcgcgcgc ttgccgctcg aagtctatcg ggcggttcgt
      961 gaccgggtcg gcagggatta cgtggtcggt gtcaggtttc tggttgatga agtgatcgcg
     1021 ggtggcaatc gcatcgatga tgcggcttat ttcggagtgg aattcgcgag agctggcttc
     1081 gattaccttt cgatctcgaa aggtggcaag ttcgaagatg ccgagcaacc gaaagtcggt
     1141 caggcggttt atccgtacac cggccgaagc ggttatgaat gcatgccgac aactctttcg
     1201 gataagcgcg ggccgtttgg gcgttcggtt ccgttggttg ctgaagttaa gcgcgccgtg
     1261 aatgcagccg gattcacaac tccgattgtc gcgacgggcg gtatcacaac tttcgaacag
     1321 gccgaagaga ttctgcgaaa cactgacgcg gacatcattg gcatggcgcg ccaggctttg
     1381 gccgatcctg actggtttca aaaggtaaga ctcggtcgcg gtgaagaggt ccgtcgctgc
     1441 acttacacaa attactgtga agcgctggac caggcgcacc ggcaggtcac gtgcaagctt
     1501 tgggatcgga aggaactcga tgggccggcg atcgctttag cgtcagatgg ccgcaggcgc
     1561 ttgctgccgc cggattggaa tgagtaattc acattgatcc attgaatcat tgttctctaa
     1621 ccagtgaatc aatgaaccga tgaatcaatg aagcaatgga tcaattccca atctgtggat
     1681 gatttcttct tagttgtcgc ttcataactt tcctgcatac ttcagcagcc caatcacaaa
     1741 cggcgacaga ataataatca cggcaaaaac aagaatcagc gcaaacccgt gctcgtcttt
     1801 cagcggacct cgaagccagt cggcaccggc gcgattcgcc gcccgcgtat tgccgtaata
     1861 caagtcgatg tcgccggaaa tgaacatgcg gctgtagccg tacgtttcat tggccagcgc
     1921 tgcgattaac caaatattgt cctgccaccg aaacactgcg tgcgcttgcc agatcaacca
     1981 tccccacaca gcgataaagg cgcccatgaa cacgtagaga acgccggggt agaaatattc
     2041 acgctcgcga attcctttga cggtcgcacc aacgatgatg ccggcgcaca tcccgccaat
     2101 ctcgatgaac gtggcaccaa caaagaagaa ccagatgccg ccgccgcgta tgctcgagat
     2161 caaaaccagc aacggccctg aaattgttac ccacagcgcc gaaggcaaat gcgtcgtcag
     2221 gtgataacgt tcgacttgca gcgagtagta ggcggcgatc ggagcgaagc cggcgataat
     2281 caccgccgcg agagctgacg gcctgacgaa ccaccagcta atcagcccga ggaagggaat
     2341 cgtgatcagg taggcaaaat gaaaacgggc caggtagtga agaagtttgg cgcgggtctc
     2401 gtccgtcatg attaggatga agttcgactt ctctcgtaat cgttaacgaa gtttggatcg
     2461 cgcttccgca acgcttcatc atccacgcgc ccactgcgct tcatcagcga atatgcgagc
     2521 tcaatcggcg acaggtgcat gtactggcgg gcgttctcaa accacaccat gctttcgtaa
     2581 gccgcggctt gatagtcctc gatcacaggt ttgcgagttt cttcgaatcg cgtcaaagct
     2641 gcgctgacat cgtgagcatc gtcaaaagac tgtttcagcg taatcgcgtc ttcaatcgcc
     2701 aatttggtgc ctgagccgat tgagaaatgc gcggtatgca gcgagtcgcc aagcagcact
     2761 acattttcga actgccaatt cgcgttctta accaggacaa agtttatcca tttcgaattg
     2821 ttcgacagta acaggtgccc gccgaggtcg cgcgcgaaca cttcgccgac atagcgacgt
     2881 gtctcttcat ctggcagcgt cgcgaagccc gcttgatccc acgtctgcgc gtcgcattcg
     2941 acaatgaagg tgctggtggt tttgtcgaac ttgtacgaat gcgccgcgaa cactcccgca
     3001 gcgctctcac ggaacgtaag cgtcaatccg tgaaatagtt gattcgtgcc g
//
LOCUS       DATDBY010000398         2703 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2716103, whole genome shotgun sequence.
ACCESSION   DATDBY010000398 DATDBY010000000
VERSION     DATDBY010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2703
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2716103"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(319..>2703)
                     /locus_tag="VIT19_07455"
     CDS             complement(319..>2703)
                     /locus_tag="VIT19_07455"
                     /inference="COORDINATES: protein motif:HMM:NF015655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838855.1"
                     /translation="CVVALGKLGSRELNYASDIDLMFLFSDEGMTAVGGTRGQVTNRE
                     YYVKLAEHILRLVGEPSGEGAAYRTDVRLRPHGREGTLACALNEAALYYETRADDWEL
                     QTLIRARSAAGSDALFHRFAAAVIDRIYRTDVSVSAALSNVRLSKQKIDIQRERSDKG
                     FNVKLGRGGIREIEFIAQALQLAFGGRDPWLRTPHTLISLARLADRSLITEFEHTQLS
                     DAYQFWRCLEHRLQMEHGLQTHSVPKDDARRGLIARRMGFSGQDPTSGFDAAMTRHAT
                     NVRVVFDRVFADTDTDAVEEEHLGRLSRSSAHSPDPEATAAAKAASILIKHLVPSEAE
                     GAGALRGVDELTAWLRSVALATVNPRRGLSFALRIARSLEKEAEHAAVTLPELKSTIR
                     LCSVSDVFGEMIASRPVLIHAVETEGDSIRPRNYASEFQRSLLPEDSFRAELDALRRQ
                     WSEALVRIAARDAARDMALDEVNHRLTELAAESIDAALRIARDELARRHGALAVEPRV
                     AVLGLGRLGSGGMDYGSDLDVIVVYDASAPSPVAGQTHDEIYARLVELTIAALANVTR
                     EGSLYRVDLRLRPDGQKGPIVSSAQSFPAYLKERAAIWEWLAYVKLRAVAGDGAFGAR
                     TEAEARHCIHELASRTEAAELLAETHRVRARLEKEKTSRRKAGINIKHGAGGMLDVYF
                     AVRYLQLRDNVPDDEADRTTLGMLARLRGAGSIDEENFRALRDGYRLLRAVDHETRLV
                     VGRSATLPDKSHAAFADIARRLDYETEQILSAELHSRMKDIRAAYERIMRPGTN"
BASE COUNT          536 a          871 c          755 g          541 t
ORIGIN      
        1 cagaggtcgg tgtctgtcta ttcataaatc caatcccatt gtttagcggc gggcgttgcc
       61 cgccgaccga cgagggcaac gccctcgtct aaacctgctc aggttctttt tggttaactc
      121 aagtgttaag tgctgctcga cccgtatcct cgtaccagca acgcggacac caacgatggc
      181 gggcaactcg ttcttcaatt gaataatctt tcgaagccgg caaacgcagc gccacttcgc
      241 gctcttcgtc gctgagttcg ctccagccgc gtaatcggcc ggtggcgcaa cgccgacatt
      301 gtctgtcaga ctccatcatc aattcgttcc ggggcgcatg attcgttcgt aggccgcgcg
      361 aatgtctttc atacgcgagt gcagctcagc gctcaagatc tgttccgttt cgtagtccag
      421 ccggcgcgcg atgtcagcga acgccgcatg agacttgtcg ggcagtgtcg ccgatcgtcc
      481 caccaccaac cgcgtttcgt gatcgaccgc ccgcagcagc cggtaaccgt cgcgtaacgc
      541 tcggaaattc tcttcatcga tcgaacctgc gccacgcaac cgcgccaaca tcccgagcgt
      601 cgttcgatct gcttcatcat cgggcacgtt gtcgcgcaac tgcaagtagc gcacagcaaa
      661 ataaacgtcg agcatgccgc ccgcgccatg cttgatattg atgcccgcct tgcgacggga
      721 cgtcttctct ttctccaggc gcgcgcggac ccgatgagtt tctgcaagca actccgccgc
      781 ctcagttcgg ctggccaact cgtgaatgca atgccgtgct tccgcttccg ttctcgcgcc
      841 aaacgccccg tcacccgcga ccgcgcgcag ctttacatac gcgagccatt cccaaattgc
      901 ggcccgctct ttcaaataag cagggaaact ctgggcgctg gacacgatcg ggcctttctg
      961 gccgtccgga cgcaggcgca ggtcgacacg gtagagcgaa ccttcgcgcg tcacgttcgc
     1021 caacgccgca atcgttaact cgaccagccg cgcgtaaatt tcatcatgag tttgtcccgc
     1081 caccggtgat ggcgccgacg cgtcgtaaac aacgattacg tcgaggtccg agccgtagtc
     1141 catgccgccg ctgccaagcc gcccgaggcc aagaaccgcg acgcggggct caaccgcaag
     1201 cgctccgtga cgacgcgcaa gttcgtctcg cgctatccgc agggcagcgt caatgctctc
     1261 ggctgccaat tccgtcagcc ggtgattgac ttcatcgaga gccatgtcac gcgcggcatc
     1321 tcgcgcggca atccggacca gagcctcgga ccactgacgg cgcaacgcgt caagttccgc
     1381 gcgaaagctg tcctccggta aaagggacct ttggaattcg ctcgcgtagt ttcgcggtcg
     1441 aatcgaatcg ccttctgttt caaccgcgtg aatcagaacg gggcggctgg cgatcatttc
     1501 gccgaaaacg tctgagacgc tgcacagccg aatcgtcgat ttcagctccg gcaaagtaac
     1561 cgcggcgtgt tcagcttcct tctccagcga gcgtgcaatt ctcaaggcga atgacagacc
     1621 gcggcgcggg ttcacagttg ccaaagcgac gctccgcagc cacgccgtga gttcgtcaac
     1681 gccgcgcagc gcgccggcgc cctcagcttc agatggaacc aggtgcttga ttaagatcga
     1741 ggcggccttt gccgctgccg tggcttcagg atccggtgag tgcgcactgc tccgcgacaa
     1801 ccggcccagg tgttcctcct caaccgcgtc ggtgtccgtg tcggcgaaca cgcggtcaaa
     1861 gacgacgcgg acattagtcg catgacgtgt cattgcggcg tcaaaaccgc tggtcggatc
     1921 ttgtccggag aaacccatgc gccgcgcgat caatccccgc cgcgcatcat ccttcggtac
     1981 cgaatgagtc tgcaggccgt gctccatttg cagacggtgt tcgaggcaac gccagaactg
     2041 ataagcatcg gacaactgcg tgtgttcgaa ttctgttatt aacgatcgat cggccagccg
     2101 cgcaagactg atcaaggtat ggggagtgcg cagccagggg tcacggcctc cgaaagcaag
     2161 ttgaagcgcc tgcgcgatga attcgatttc gcgaatcccg ccacggccga gctttacgtt
     2221 gaagcctttg tcgctgcgct cgcgttgaat gtcgatcttc tgctttgaga gccgaacatt
     2281 ggacagcgcg gcgctgacgc ttacgtctgt gcgatagatg cgatcaatga cagcggcagc
     2341 gaaccggtgg aaaagcgcgt cggaaccggc ggctgagcgc gcgcgaatca acgtctgcaa
     2401 ctcccaatcg tcagcccgcg tctcgtaata aagagctgct tcattcagcg cgcatgccag
     2461 cgtgccttcg cggccatgcg gcctcagccg cacgtccgtg cgataggcgg cgccttcgcc
     2521 gctgggttcg cccaccagac gcaaaatgtg ttcagccagc ttgacgtaat attctcgatt
     2581 cgtgacctgg ccacgcgtcc cgccaacggc tgtcatccct tcatccgaaa aaaggaacat
     2641 cagatcgatg tccgaagcgt aattgagttc ccgcgaaccg agctttccga gcgcgacgac
     2701 gca
//
LOCUS       DATDBY010000399        12702 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_48912, whole genome shotgun sequence.
ACCESSION   DATDBY010000399 DATDBY010000000
VERSION     DATDBY010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 12702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12702
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48912"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..682)
                     /locus_tag="VIT19_07460"
     CDS             complement(<1..682)
                     /locus_tag="VIT19_07460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838856.1"
                     /translation="MPRPNTTQIAWLSPFPPQRSGIANYSYWLVKELRNAFEIDLYYD
                     GEAPCEELQNLFATHPLSEFESHRQQYDRVVYHLGNNTEFHTGIYRTAWNFPGTVVLH
                     DYDLSGFMHEAFYRSNYELFAQALPNENDGQGRRRSALLDRLVPPGGNDPMSHAIVAR
                     SKKVIVHHRWVKQQFDDDKHVEVIPMFAKLDCIATAEDVRIFSRKVGIKDDHFVLVCL
                     GFVNSNKLP"
     gene            complement(740..1792)
                     /locus_tag="VIT19_07465"
     CDS             complement(740..1792)
                     /locus_tag="VIT19_07465"
                     /inference="COORDINATES: protein motif:HMM:NF015350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STELLO glycosyltransferase family protein"
                     /protein_id="HEY5838857.1"
                     /translation="MDDKTVLVVTSISAPNKALRSLADGCRQHEIDFIVIGDEASPTE
                     FEIAGCHFYGLEEQKALDLDFARKCPTRSYARKNVGYLLAMRTGATTLIETDDDNFPR
                     AEFWQTRRRQQRVRAIINGGWFNIYRYFTDANIWPRGLPLDQVNRTGPPYETLSEQEL
                     DCPIQSGLVDENPDVDAIYRLVLPLPQSFRADRRVALRNSWCPFNSQNTTWWRDAFPL
                     LYLPAYCSIRMTDIWRGFVAQRIAWANDWSVLFHEPTAWQERNEHNLMRDFRDEVPGY
                     LNNTALCEALGRLDLKAGAENLNSNLLICYEQMVRMGLVGEGELDLLNAWSQDIEQHR
                     LAPARTDSLVGGAVVL"
     gene            complement(1797..2552)
                     /locus_tag="VIT19_07470"
     CDS             complement(1797..2552)
                     /locus_tag="VIT19_07470"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5838858.1"
                     /translation="MRAALISNGFSATSLGIVCPMANEEASAVSFVNRVLDECAAFDF
                     SRVTFFAILDSACRDRTRGLLEELKSTRRELNVIWAPENRCAVDAYVRGYREALNAGC
                     DWILEIDAGFSHQPENIPLFFEKMREGYDCVFGSRFCEGGHIADSSQKRNILSRGGTL
                     LTNALMGTKLKDMTSGFQMFSRAALEHVLAKGIQSRGHFFQTEMKIHCRNLRTVEVPI
                     HYRAASASVNQRVIKDSLKNLWRLYRLKRQGRA"
     gene            complement(2649..4880)
                     /locus_tag="VIT19_07475"
     CDS             complement(2649..4880)
                     /locus_tag="VIT19_07475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838859.1"
                     /translation="MKGIWLQKFSAHKRDLVIALTIFGVTLLTFLWSPIHLVSDSKYM
                     LVVSQSLLSHRSFALDHFALPKHEPKDDGVFVLNGKIPQLEYVGDHLYYIFPPGSSVL
                     SLPAVALMNRFGLSVINADGTHNVENEVKQQTILAAILMALLAVIFYATSRLLLPARW
                     ALIVALGATLGTQVWSTLSRGVWSDTWGVLLLAIVVWQLMAARFRNSALRPILLGTLL
                     AWAYFVRPTNAVPLVAVAAYVLIYYRRNFLSFAAAACAWIFLFVVYSWAHFHKLLPSY
                     YTAKRLTFENFGEGLAGNLISPSRGLFVFVPVTLFVFYLLVRHRRKLGSSGLAHLSLG
                     IVVTHWIAISGYPQWWGGGSYGPRLMAGVLPWLVLLAIISLDAMLKTRAEFKDRLRTQ
                     FRLANTVGALLLLISVFLNGIGAIMPATVIWNYKPTRVDRPTTRLWDWRYPQFLAGFL
                     RPPLPAVLPPANVRVQVGRNGAKPYLLDGWSVAEEIFRWTDGREATVIFHLDEVTDAE
                     LRMQMAPFLVPGKLERQRVGLKLNQHSLGTITLTDHVQREYSWKLPKENLQKDNVLRF
                     ELPDATTPKAVGLNEDLRELALAVSWLEIKTANYSQLINAKTRTVAEGPLPEGGYDAA
                     IEPINPPGELKIGESAVLTVKVKNTSGAVWYAGGHAGGRYTIRLGNHWLDSNSRRVVL
                     NDGRVMLPYDLRPYAEVELLLPIKAPAVPGTYVLELDMVQEGQNWFADEESRTARITM
                     IIR"
     gene            complement(4985..7198)
                     /locus_tag="VIT19_07480"
     CDS             complement(4985..7198)
                     /locus_tag="VIT19_07480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838860.1"
                     /translation="MKTKWLQLISERRRDLSLVVLVFSLTFTVFLLSPNQAISDSRFT
                     FVLSESLLKHRSFAIDHFAMPRLEPRDNGYYVRNGDIYQQEWSHGRLYYYHPPGSSVL
                     SVPYVAFMHLFGLSSINPDGTYNIDNEMALQRILAGLLMALTAAIFYYTARLLLPGKW
                     SVIVALGGALGTPVWSTLSRGVWSDTWGVLLMGIVILLLVADAVGRIKLNPVVFATLL
                     AWTYFVRPTNSVAITAISIYLVLYRKQLFLRYAAVGLIWVAVFVAYSLSHFGWFLPTY
                     YRASRLSFEHFGEALAGNLISPARGLLVYVPVILFVAYLLVRYRRAIANYRLLWLTVS
                     ISILYWLANSAFPHWWGGYSYGPRLMACIVPWIVLLTVLGIDAMRRADVAQRPWVWRG
                     QVAAGALLLVVSIAINGVGAVVAETQTWNERPVSVDKQPSRLWDWRYPQFLAGFLRPP
                     LPREFPRAGVRIEFSRTAAEPFLWYGWSVNEPEYRWTNGREAAVIFAVDDISDAQLLM
                     KVTPLLVAGKLDQQRVDLRLNDQPLTQLTLTQPMAQEFSVPLPQQLLLTKNILVFNLP
                     DARTPRSLGLNDNRKLALAVFWMEVRSSGRATQTEAKTVAHGPLPTGGYIAEIEALDP
                     PARLPSGKPVNVRVRVKNTSRAFWPALGQTDGGFKVQFGNHWLDAAGKRVQLDDGRTA
                     LPFDIAPGGEVELTLTIIPPAAPGDYILELDMVQERVNWFADEGSNPLRIGIKVF"
     gene            complement(7297..9627)
                     /locus_tag="VIT19_07485"
     CDS             complement(7297..9627)
                     /locus_tag="VIT19_07485"
                     /inference="COORDINATES: protein motif:HMM:NF025314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4214 domain-containing protein"
                     /protein_id="HEY5838861.1"
                     /translation="MAKVPNKLTGSSWYSPRLALVLLAIIVWSFFLWRAVDVFKPGVN
                     SVVPFNSDCAIPVLMSNDERPITLFNLYYYGHDRWGGWPFLAAQLIRRATGYHWSPQR
                     VGTMQIFWLFLGALVIGGLSGRHWAILALTFLLSICVFDSGHQIFLLSHVFAWQVTAL
                     LLAWYSLRRVFDRDAGAENGRRWKPGVWPVLLFATSYLAIWSSITSVPFLLLLVCLET
                     LRRRLRTDYAALDHKLLKSFLAGVVPVLAATVAERLQVMLFRRDVASRFGVDYNTPLQ
                     LDYGFLIPNLEIQLDKFANVFWWPFGLIASLAVVVVSGVLIYGRLKNKDSWLNKVKAI
                     TANDTAIVALGAYVLAVTNFVLAVAVRHVRLNDYDDRFLVLTNLFSTISGLLILFLIV
                     NEVSGHRRVRQYIQPALVTGGAVLLAATFPAKIYRPEYQAFAEASAWLAQRAPRGILL
                     GDYWGTYVFAAMQPENTMTPVPFDGQFNRMPWTRDMIRTANELVLQYPGSKLEESAQP
                     PERLSQYGARFSVVEPRWYDNGVFAFARYVRNHAAETDTSAARDDAFARRIHLHILSR
                     EPDHVEVKKFVTQINECRGEDICIQERTVGENLNLLRSVEFQTAGGFVFQLYQVGFGR
                     VPKYFEWERDRKKLAALGHSATAAFIDDWAAQPEFVSRYPASLSNGEYIDKLLAAART
                     PRDETQRAALIERLNDGRASRAAALKDLINRLRPAAEDNEAFVTLCYFIYLKRDPDAG
                     GFNHWLRTLRDHPQGEEAVVGGFLKSGEYRSKFPRL"
     gene            9737..10720
                     /locus_tag="VIT19_07490"
     CDS             9737..10720
                     /locus_tag="VIT19_07490"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY5838862.1"
                     /translation="MTTRAHDASCLVRKVSIEMCTTDANQDFAVSLKTFVQQAQAGGQ
                     GNPLEVVSNRDFIVLAFLVILNRLPDEDGIEYYLNRLGGLINRQQLVQYLFESEEYRA
                     RFEPQFADRLHEARKEFIKTLPEAECIVDLGGACPTVIEGALYTSGYPYRARRLIIVD
                     LPHDDRLISPLDFHEETIVRDYGVIAYVHSSMADLSAIQDSVADLVFAGESIEHVTQA
                     EAPVVIAEARRILKPGGHFCLDTPNSKLTRIHSPEQFVHPEHKVEYTPNDLIDLLKEG
                     GFDVIEVGGICPMPETAATGVFNATEAFRTPALSADADISYCFYVKARKPI"
     gene            complement(10773..12074)
                     /locus_tag="VIT19_07495"
     CDS             complement(10773..12074)
                     /locus_tag="VIT19_07495"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5838863.1"
                     /translation="MNNAADQAEFIDVRQRIRELSVEELCGSAEDFFAQRANWDSLLA
                     KPLSDIEEAPELLVCFAHVVRGLRLLPDMTVLDFGAGSCWTARFLTQLGMKVIALDVS
                     PSALRIGRKLFRRHPVFGTKPRPEFLLFDGRTINLADESVDRISCWEAFHHVPNPEQV
                     IKEMARVLKPGGIAGFSEPGPDHSRSEQSQNEMRANRVIENDIDIHQIWRAAEAAGFT
                     DLRVAVFSAEPMSLPLADFDRVLSGDDKSTNYLVHVRNQLRGRRLFFLFKGEPILPLD
                     SRRRAGLRGELRISPAQARVRAGQSIRLKVSVKNVGESTWLPTPEAAQPWWKRGPIAR
                     FGRQPHMGPDRIPPRVGGVRLGIQLLNQAEALLDIDYFRYHLTPGEGREIKPFEKVEL
                     EIDVPAPTKGRYSFHCDLVSEGVSWFDDNESPPVRLPIEVI"
     gene            complement(12071..>12702)
                     /locus_tag="VIT19_07500"
     CDS             complement(12071..>12702)
                     /locus_tag="VIT19_07500"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEY5838864.1"
                     /translation="TPLAVADCFRPYPFPKIAEAEDYVLYPGGFDPRKNMIGALEAFA
                     ELHKHHGNDTAVSRTRLRIVCHADEPSEKELRKRAHGLGIDDKLDLTGFVTEAELVGL
                     YQKARCLFFPSLYEGFGLPVLEGLACGLPIAASNTSSIPEVAGDLALYFDPNDVGEMA
                     DVLYQTLLRPSDLASRNYRHERARQFSWTKTAVATLEAWRQATEEIAPA"
BASE COUNT         3037 a         3550 c         3415 g         2700 t
ORIGIN      
        1 gcggaagttt gtttgaatta acaaagccca gacagacgag tacaaagtga tcgtccttaa
       61 tgccgacctt gcggctgaag atgcggacat cttcagcggt ggcgatgcag tcaagtttcg
      121 cgaacatcgg aatcacctcg acgtgcttgt cgtcgtcgaa ctgctgcttg acccaacgat
      181 gatgcacgat gacctttttg cttcgcgcaa caatggcgtg cgacatcgga tcattgccac
      241 cgggcggaac caacctatcg agcaacgccg atcggcgccg accctggccg tcgttttcgt
      301 tgggcagtgc ctgagcgaac aattcgtagt ttgaccgata gaaggcctcg tgcatgaaac
      361 cactcaaatc atagtcgtga agcacaaccg taccgggaaa attccacgcc gtgcggtaaa
      421 tgcctgtgtg aaattcagta ttgtttccga ggtgatagac cacccggtcg tactgttggc
      481 ggtggctttc gaactcgctc aacggatgcg tcgcaaacag attttgcagc tcttcacacg
      541 gagcctcgcc gtcgtaatag aggtcgatct cgaatgcatt tctaagttcc ttgaccagcc
      601 aatagctgta gttcgcgatc ccgctccgct gcggcgggaa tggagacagc catgcaatct
      661 gcgtcgtgtt tggccttggc atgagtaccg atgaaacctc cggcgcctgt tactaaacat
      721 gtcctcataa tgtttttagt tagagaacca ccgcgccgcc aaccaacgag tcggtgcgtg
      781 ccggcgcgag ccgatgctgt tcgatgtcct gactccaggc attcagcaag tccagctctc
      841 cttcgccaac cagtcccatc cggaccattt gctcataaca aataagcagg ttgctgttca
      901 agttttccgc gccagccttc agatctagtc gaccgagagc ctcgcaaagg gcggtgttgt
      961 taagataccc cggcacttcg tcgcgaaagt cgcgcatcaa attatgttcg ttccgctcct
     1021 gccacgcggt gggctcgtga aacaggaccg accagtcatt cgcccaggcg atgcgttgag
     1081 ccacaaaccc gcgccagatg tcggtcatac gaatcgagca atacgccggc aggtaaagca
     1141 gcgggaaagc atctcgccac caagtcgtgt tttgactgtt gaaaggacac cacgagttgc
     1201 gcagagccac tcgacgatcc gcgcggaatg actgcggcaa gggcagcacg agccgataaa
     1261 tcgcatcaac gtcaggattt tcgtctacca gtcccgactg aattgggcaa tcaagttctt
     1321 gctcggacag ggtttcatac ggcgggccgg ttcggttcac ctgatccagc ggcaacccgc
     1381 gcggccagat gttagcgtcc gtgaaatacc ggtaaatgtt aaaccagccg ccgtttatga
     1441 tcgcgcgcac acgttgctgc cggcgccgcg tttgccagaa ctcagcgcgc ggaaaattat
     1501 cgtcgtccgt ttcaattagc gtcgtggcgc cggtgcgcat cgccagcaga tatccgacat
     1561 tcttgcgggc ataacttcgc gttggacatt tccgcgcgaa atcgagatcg agcgcttttt
     1621 gttcctcaag cccatagaaa tgacagcccg cgatttcgaa ttccgttgga ctggcttcgt
     1681 cgccgattac gatgaaatct atttcatgtt ggcgacagcc gtcagccaaa gatcgcagag
     1741 ccttatttgg cgccgaaatt gaggtgacga ccagaacggt tttgtcatcc atctgttcat
     1801 gcccgtcctt gtcgtttgag ccggtacagg cgccacaggt ttttcagcga atccttgatc
     1861 acgcgctggt ttacgctcgc gctggctgcc cgatagtgga tgggtacttc gacagttctt
     1921 aagttacgac agtgaatctt catctcagtt tgaaagaaat gtccgcgcga ttgaatgcct
     1981 ttagccagga cgtgctccag cgccgcgcgc gagaacattt gaaacccgct tgtcatatct
     2041 ttcaatttcg ttcccatcaa ggcattggtg agaagggtgc cgccacggct tagaatgttg
     2101 cgcttttgcg aactgtccgc aatgtgtcca ccctcgcaga aacggctgcc aaacacgcaa
     2161 tcgtagccct cgcgcatttt ttcgaagaag agcggaatat tttccggctg atgactaaag
     2221 cctgcgtcga tctccaaaat ccaatcacac cccgcattca acgcctcgcg ataaccccgg
     2281 acataggcat caacggcgca acgattttcc ggcgcccaga ttacgtttag ctctcgccgc
     2341 gtgctcttca attcttccaa taatcctcgc gttcgatcgc gacaagcact atcaaggatc
     2401 gcgaaaaagg ttactcggga aaaatcgaag gccgcacact catccagcac tcggttgacg
     2461 aagctgaccg cggaagcctc ttcgttggcc attgggcaaa cgataccgag actagtcgcc
     2521 gaaaacccgt tactgatcag tgcggcgcgc atcactgctc aatcatgcag gaaagacttc
     2581 cttctttgca aaaccgaaat tacccaaatc cggccgcctg ccgaagccac aagaaccggt
     2641 tgcgtgcgtc accggataat catggttatg cgcgcggtac gcgattcttc atccgcgaac
     2701 cagttctgac cttcctgtac catatccaac tcgagaacat aagtaccggg aaccgctggc
     2761 gctttgattg gaagtagaag ctcaacttcg gcgtagggtc taagatcata gggcagcatt
     2821 acgcggccat cgttcagcac gacccggcga gagtttgagt caagccagtg gttacccaga
     2881 cgaatggtat agcggccacc agcgtgtccg cccgcgtacc agacagctcc actagtgttc
     2941 tttactttta ccgtgagaac cgctgattcg ccgattttca gttcacctgg aggattgatc
     3001 ggttcgatag ccgcgtcata accgccctca ggaagaggac cttcggcgac ggttcttgtt
     3061 tttgcattaa tcaactgcga gtaatttgca gtcttaatct ccagccagga cacagccagg
     3121 gctaactccc tcaggtcttc attaagtcct accgccttgg gagtcgttgc atcaggaagc
     3181 tcaaaccgta agacgttatc tttctggagg ttttctttcg gcagtttcca ggaatattcg
     3241 cgctgcacgt ggtctgtgag ggtaatagtc cccaaagaat gttgattcaa tttcagcccg
     3301 actctttggc gttcaagttt gccgggcacg aggaacggcg ccatctgcat gcgtaactcg
     3361 gcatcagtga cttcatcaag gtgaaaaatc acggtagctt cgcgtccgtc agtccaacgg
     3421 aagatttcct ccgcgacgct ccatccgtct aacaggtatg gtttcgcccc gttgcgtccg
     3481 acttgaaccc gaacattcgc cggcggcaaa actgcaggta aaggcggtcg cagaaatccc
     3541 gcgaggaatt gtggatagcg ccagtcccaa agtcgtgttg tcggcctgtc tactctggtg
     3601 ggtttgtaat tccagattac cgtggccggc atgatcgctc cgatgccatt taagaacacg
     3661 ctgatcagta gtaacagggc acccacggtg tttgcgagtc gaaattgcgt tcgtaaacga
     3721 tctttgaatt cggcgcgcgt cttcaacatg gcgtcgagcg aaataattgc cagaagcacg
     3781 agccacggaa gaacgcctgc catcagccgc gggccataac tgccaccgcc ccaccactgc
     3841 gggtatcctg aaatcgctat ccaatgtgtt acgacgatcc caagcgaaag gtgggccagt
     3901 ccggaactac ctagttttct gcggtgccgt acaagcagat agaatacaaa aagagttacc
     3961 ggcacaaaga caaagagtcc gcgtgacgga ctaatcaggt tacccgcgag cccctcgcca
     4021 aagttttcaa aggtcagtcg cttcgccgtg tagtaactcg gcaataactt atggaagtgc
     4081 gcccatgagt aaacgacaaa caaaaagatc cacgcacatg ccgctgccgc gaatgacaag
     4141 aaattccggc ggtagtaaat aagcacataa gcggccacgg cgacgagcgg caccgcattg
     4201 gttggacgca cgaagtacgc ccaagcgagc agcgttccga gcagaattgg tcgcaaagcg
     4261 ctgtttctga atcgcgccgc catcagttgc cataccacta tggccagcag gagcactccc
     4321 cacgtatccg accacacacc tcgggacagc gtgctccaaa cctgagtgcc cagcgttgct
     4381 ccgagggcga cgatcaaggc ccatcgcgcg gggagcagta aacggctggt tgcataaaag
     4441 atgaccgcga gcagcgccat taaaatcgca gcgagtattg tttgttgctt aacctcgttt
     4501 tcgacgttat gcgtcccatc cgcgttaatt acggaaaggc caaatcggtt cattagagcg
     4561 acggcaggca gcgaaagtac cgaactcccg ggcgggaaaa tgtagtaaag gtgatcgcca
     4621 acgtactcaa gctgaggaat cttaccgttg agaacgaaaa ccccatcgtc ctttggctcg
     4681 tgcttcggca gggcgaaatg atcgagggca aagctgcggt ggctcagcag gctctggctt
     4741 acgaccaaca tgtattttga gtccgatacc agatgaatcg gcgaccacag aaacgtaagc
     4801 agcgtgacac cgaagatagt tagtgcgatc accaaatccc gtttgtgcgc agaaaacttc
     4861 tgaagccaaa tgcctttcat gcgaagccat acgggttgtt ttgagcgcgt catagcttac
     4921 tgctggtcat cgagaaatcg gacgagaatg tcttaccgtg gaagtatcgt gcgatacgca
     4981 tcaactaaaa cactttaatt cctatacgca gggggtttga gccttcgtcg gcgaaccagt
     5041 tgacgcgctc ctgcaccatg tcgagctcca ggatgtaatc gcccggagca gcagggggaa
     5101 taatcgtcag agttagctca acctcgccgc ccggtgcgat gtcaaacggt aatgcagtcc
     5161 gaccgtcatc gagctgcacc ctcttgccgg ccgcatcgag ccaatgattt ccaaattgca
     5221 ctttgaagcc gccgtccgtt tgtcccaggg ccggccagaa tgcgcggctc gtattcttca
     5281 cgcgcacgcg cacattgact ggtttacccg acggcaacct tgccggcggg tcaagtgctt
     5341 cgatctcggc gatgtaacca ccggttggca gcggaccatg ggcgacggtc ttcgcctcag
     5401 tttgtgtcgc gcggccggaa gagcgaacct ccatccaaaa caccgcaagc gccaacttgc
     5461 gattgtcgtt caaaccaagg gatctcggtg tccgagcatc cggcaagttg aacacgagaa
     5521 tgttcttcgt tagcagcaac tgttgaggta gcggaacaga aaactcctgc gccattggct
     5581 gcgtgagtgt cagctgcgtg agcggttgat cgttcaaacg caggtccacg cgttgctgat
     5641 ccaatttgcc ggcgaccagc agcggcgtga ccttcatcaa tagttgtgcg tcgctgatgt
     5701 cgtccactgc aaaaatgact gcggcctcgc gcccattcgt ccagcggtat tcgggctcgt
     5761 tcacactcca cccgtaccac aggaaaggtt cggccgccgt gcgcgagaac tcgatacgca
     5821 caccagcacg agggaattca cgcggaagcg gcgggcggag aaaccctgcg agaaactgcg
     5881 ggtaacgcca gtcccagagg cggctcggct gcttgtcgac actgacggga cgttcattcc
     5941 aggtctgggt ctcggcaacg accgccccaa ctccatttat ggcgatgctc actaccagca
     6001 gcagcgcacc ggcggcaact tgcccccgcc agacccaggg tcgctgcgca acatcagctc
     6061 gtcgcatcgc gtcgatgcca agaaccgtaa gcagtacaat ccacggaacg atgcacgcca
     6121 tcagtcgtgg cccgtaactg tagccgcccc accagtgtgg aaaggccgag ttcgccagcc
     6181 agtacaggat cgaaatgctt accgtcagcc aaagaagtcg gtagttcgcg atcgctcgcc
     6241 gataacgcac gagcaggtaa gcgacaaaga gaataacggg cacataaact aataatccgc
     6301 gagcagggct gatcagattt cccgcgagag cttcgccaaa gtgttcgaag ctcagacgac
     6361 tggcgcgata gtaagtaggt aagaaccagc cgaaatggct gagtgaataa gcgacaaata
     6421 cggcaaccca gatcaaaccg acagcggcat aacgcaaaaa caattgcttg cgataaagaa
     6481 cgaggtagat cgaaattgcg gtgatcgcga ccgagtttgt cggccgcaca aaataagtcc
     6541 acgcaagcag cgtagcgaag accacgggat tcagcttgat gcgtcctacg gcgtctgcca
     6601 ccaggagcag aatgacaatc cccatcagga gaacgcccca ggtatctgac caaacgcctc
     6661 tcgatagagt gctccagacc ggtgttccca gcgcgcctcc cagcgccacg atgacgctcc
     6721 actttcctgg taagagcagg cgggctgtgt agtaaaagat cgcggcggtc aaggccatca
     6781 acaagcccgc gagaatcctc tgcagcgcca tttcgttgtc gatgttatag gtgccgtcgg
     6841 gattgatgga tgacaagcca aacagatgca tgaacgcgac ataggggacg gagagcacag
     6901 agctccccgg cggatgatag tagtagagac gtccgtggct ccattcctgt tgatagatgt
     6961 ccccgttccg tacgtagtag ccattgtccc tgggctcaag gcgcggcata gcgaaatgat
     7021 caatggcaaa actacgatgc tttagcaggc tctcgctcag cacgaaagtg aatcgcgaat
     7081 cggagatagc ctggttgggt gacagcagga aaacagtgaa agtgagcgag aaaaccagga
     7141 cgacaagact aagatcgcgg cggcgctcag aaatcagttg caaccatttt gttttcatcg
     7201 aactttaagg gccgacaatt tgcgtaaatc gtttgcgcga ttaatgggct atcaagctcc
     7261 aattgtcgcg agttaacttt gccaatatcc ggttatttat agccggggaa attttgagcg
     7321 gtattcgccc gacttgagaa atcctccaac cactgcttcc tcgccttgcg gatggtctct
     7381 cagagttcgt aaccagtgat tgaagccacc tgcgtccggg tctcgcttga ggtagataaa
     7441 gtagcacagc gtaacaaacg cttcattgtc ctcagcggca ggccgcagtc gattaataag
     7501 gtcttttagc gcggccgcac gactcgcgcg accgtcgttc aaacgttcga tcagggccgc
     7561 gcgttgagtt tcatcacgcg gtgtacgcgc cgctgccaat agcttgtcga tgtactcgcc
     7621 attacttagt gaggcgggat aacgactgac gaattcaggt tgagccgccc aatcatctat
     7681 gaacgccgcc gtcgcgctat ggcccaacgc tgctagtttc tttcgatctc gttcccattc
     7741 aaaatatttc ggcacgcgcc cgaatcccac ctggtagagt tgaaagacaa aacctccggc
     7801 ggtttgaaac tcaactgagc gcaacagatt caagttttca ccgacggtac gctcctgaat
     7861 gcagatgtct tctccgcgac actcgttaat ctgtgtgacg aacttcttta cttcaacatg
     7921 atccggttca cgactcagga tatgcaggtg tattcgtcgc gcaaacgcgt cgtcccgggc
     7981 cgcgctggtg tcggtttcgg ccgcatggtt cctgacgtat ctcgcgaagg caaatacccc
     8041 gttgtcatac caccgcggct caaccacgct aaatcgcgcg ccgtactgag atagacgttc
     8101 agggggctgg gccgattctt ccaacttact tccgggatac tgcaagacta gttcgttggc
     8161 cgtccttatc atatcgcgcg tccagggcat ccgattgaat tgtccatcga aaggcacagg
     8221 ggtcattgtg ttctctggtt gcatcgctgc gaaaacgtaa gttccccaat aatccccgag
     8281 cagaatgcct cgcggggccc gctgagccag ccaagccgac gcctctgcaa acgcttgata
     8341 ctcgggccgg tagattttcg ccggaaacgt tgccgccaac agcactgcgc cgcctgtgac
     8401 taacgcgggt tgaatgtatt ggcgaactct gcggtgacca gaaacttcgt tcacgattag
     8461 gaaaagaatc aacaggccgc taatggtgct gaacagattc gtcagcacca gaaatctatc
     8521 gtcatagtcg ttaagccgaa catgacgcac tgccacggcg agaacgaagt tggtcacggc
     8581 cagcacatag gctccgagag ctacgatagc cgtgtcgttg gcggttatcg ctttcacttt
     8641 attcagccac gagtctttgt ttttaagccg gccgtatatc agtacgccgc tcaccaccac
     8701 tacggccagc gaggcgatca agccgaacgg ccaccagaaa acgttcgcaa acttgtccag
     8761 ttgtatttcg aggttcggga tcagaaaccc atagtccaat tgcagaggcg tgttgtaatc
     8821 cacgccgaaa cggctggcca catctcgacg gaaaagcatt acctgcaacc gttccgcgac
     8881 ggtcgcagca aggacaggaa ccacgccggc cagaaatgat ttcaacaact tatgatcaag
     8941 tgccgcatag tctgttctca atcgtcttct gagagtttcc agacaaacaa gcaggagcaa
     9001 aaacggcaca ctggttatcg aactccaaat agcgagatag gaagtggcga acaacaggac
     9061 cggccacacg ccgggcttcc accgccgacc gttctcagct ccggcgtcgc gatcgaaaac
     9121 acgccgcagg ctgtaccagg cgagcagcag ggccgtgacc tgccaggcga agacgtgact
     9181 aagcaggaaa atctgatggc cggaatcgaa cacgcaaatc gacagcagaa acgtgagcgc
     9241 gaggatcgcc cagtgtcggc cactcaatcc accgatgact aacgcaccaa ggaagagcca
     9301 gaatatttgc atcgtcccga cgcgctgagg cgaccagtgg tatccggtcg cgcgacggat
     9361 gagttgcgcg gccagaaacg gccaaccgcc ccaacggtcg tgcccgtaat agtagaggtt
     9421 gaaaagagtg attggccgct cgtcgttgga catgagaacg ggaatggcac aatcggagtt
     9481 aaaagggacg acagaattga cgccaggttt gaaaacgtcg actgcccgcc aaagaaagaa
     9541 agaccaaaca atgatcgcca gcaggacgag ggcaagcctc ggtgaatacc acgaactgcc
     9601 ggtcagcttg ttcgggactt tcgccataga aataagcagg gccgcgcgtc agcaaactaa
     9661 attggcgcta cttgttgttg cgcggaaagc acatgtgaaa gtcatgctat cctacgacag
     9721 tctggtttga aatactgtga ccacccgtgc acatgacgct tcatgtctgg tgcgcaaagt
     9781 ctcaatcgaa atgtgcacga cagacgctaa ccaagatttc gcggtttcgc tgaagacgtt
     9841 cgttcagcag gcccaggctg gaggccaggg caatcctctg gaggtggtca gcaatcgcga
     9901 tttcatcgta ctagcttttc tcgtgatact gaaccggctg cccgacgaag acggtattga
     9961 atactacttg aaccgtctgg gtgggctgat taaccggcaa cagcttgttc agtatttatt
    10021 cgagtctgaa gaatatcgag cccgatttga accgcagttt gcggatcggc tgcacgaagc
    10081 acggaaggaa tttatcaaga cgttgccgga agcagaatgt atcgtggacc tgggaggagc
    10141 gtgtcccacg gttattgaag gggctcttta tacaagtggg tacccgtacc gagccaggag
    10201 attgataatc gtcgacctgc cgcacgatga ccgcttgatt tctcctttgg attttcacga
    10261 ggaaacgatc gtccgggatt atggagtcat cgcgtatgtg cattcctcaa tggctgattt
    10321 gtcggcgatc caggattcgg tcgccgattt agtattcgcc ggggaaagca tcgagcacgt
    10381 aacccaggcg gaggcgcccg tcgtcattgc tgaagcaagg cggatcttaa aaccgggcgg
    10441 acacttttgt ctcgataccc ctaacagcaa attgacgcgc atacattcgc ctgagcaatt
    10501 cgttcatcca gaacacaaag tcgaatacac tccgaatgac ttgatagatt tgctaaagga
    10561 gggcggcttt gacgtgattg aagtaggcgg catctgtccg atgccggaaa cggcagccac
    10621 gggggtgttc aacgcaaccg aagccttcag gacacctgct ttaagcgcgg atgcggatat
    10681 cagctactgc ttttacgtga aggcccgcaa gccaatttga aaccggcggt cctggttgaa
    10741 tcagggcggt gagccagggg gcatcacaaa aatcaaatga cttctatggg cagtcttacg
    10801 ggcggtgatt cattgtcatc gaaccatgag accccttcgc tgaccaggtc gcagtgaaaa
    10861 ctatagcggc ccttggtggg cgcgggaacg tcaatctcca gctcaacttt ttcgaacggc
    10921 ttgatttcgc ggccttcgcc cggtgtcagg tggtagcgaa aatagtcgat gtctaacaat
    10981 gcttctgcct ggttgagaag ctgaatgcct aaacgaacgc caccgacgcg tggcggaatt
    11041 cgatcggggc ccatgtgcgg ctgccttcca aagcgcgcga tcgggccccg tttccaccac
    11101 ggttgcgcag cctcaggtgt cggcagccac gtgctctccc cgacattctt gaccgaaact
    11161 ttcaggcgga tcgactggcc cgcgcgcacg cgcgcctgag cagggctgat tctcaactcg
    11221 cctcgaagtc cagcgcgccg gcgactatca agcggcagaa tcggttcacc tttgaacaga
    11281 aaaaagagtc ggcgtcctcg cagttggttt cgaacgtgga ccaggtaatt cgtgctcttg
    11341 tcgtcgccgc ttaataccct gtcgaagtct gcaagcggca aactcatggg ctcagcactg
    11401 aagacagcca ctcgtaaatc cgtaaagccg gcagcctctg ccgcgcgcca gatttggtga
    11461 atatcgatgt cattctcgat cactctgttc gcccgcatct cgttttgaga ctgttcagac
    11521 ctcgaatgat cgggtcccgg ttctgaaaaa cccgcgatgc cgcccggctt caggacgcgg
    11581 gccatctctt tgatcacctg ttccgggtta ggcacatgat ggaatgcttc ccaacaagag
    11641 atgcggtcca cactctcgtc cgccaggttg atggtgcggc cgtcgaataa gagaaactcg
    11701 ggtcgcggtt tggtgccaaa aaccggatgg cgccggaaca gtttcctgcc gatgcgtaac
    11761 gctgagggcg aaacatcaag cgcgatgact ttcattccta actgcgtcag gaagcgcgcg
    11821 gtccaacacg agcccgcgcc gaagtccaaa accgtcatat ccgggagcaa cctcaaaccg
    11881 cggacgacgt gagcaaaaca aactaagagt tcgggcgctt cctcgatgtc agacagtggt
    11941 ttggcaagca ggctgtccca gttcgcgcgc tgcgcgaaaa agtcttcggc gcttccgcac
    12001 aattcttcaa cgcttagctc gcggatgcgt tgcctgacgt caatgaattc agcctggtcc
    12061 gcggcgttat tcatgcgggt gcgatctcct ctgttgcctg gcgccacgct tccagggttg
    12121 cgacggcggt ttttgtccat gagaactgcc gcgcacgttc atgccggtaa tttcgcgaag
    12181 cgagatcgct cggccgcagc aaagtttgat aaagcacgtc cgccatctct ccaacgtcat
    12241 ttggatcgaa gtacaacgcc aggtcgccgg ccacctcggg aattgaagac gtgttcgaag
    12301 ctgcgattgg caacccacag gcgaggcctt caagcaccgg aagcccgaag ccttcataca
    12361 gcgaaggaaa aaacaggcag cgcgcttttt gatagagccc gacgagttcg gcctcggtca
    12421 cgaatccggt caggtccagc ttgtcatcaa tgcccagccc atgcgcccgc ttgcgaagtt
    12481 ccttttcaga aggctcgtct gcgtgacaaa caattcgcag gcgcgtgcgg cttacggccg
    12541 tgtcattgcc atgatgcttg tgcaactcgg caaacgcctc aagcgcgcca atcatgttct
    12601 ttcttggatc aaagccgccc gggtacagaa catagtcttc ggcttccgcg attttcggaa
    12661 atgggtaagg gcgaaaacaa tcggccaccg ccagcggcgt ga
//
LOCUS       DATDBY010000400         2303 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2364884, whole genome shotgun sequence.
ACCESSION   DATDBY010000400 DATDBY010000000
VERSION     DATDBY010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2364884"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..913
                     /locus_tag="VIT19_07505"
     CDS             <1..913
                     /locus_tag="VIT19_07505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838865.1"
                     /translation="LAPDEGKLVDKINAAPDPSGKLAAAGELIKKYPKTAIRGQVVLE
                     LANKIREVKDAAQKLTLAQQLQTMFNEPADEKTVVLVVVDALADANQLDQAFAKGSDF
                     LTRNPESIEVLVELVSVGTEEAKKQNTKFVDQSIRYGTQAIALADANKKPADFDETTW
                     QQFKTTTVPSLFQSLGLLYMIKGASAEAKASYIKASQGAPSDPFNFVMIAALMNDEYQ
                     AAAKAYQTMAAGAPKEAQLKKVQALLDAVIDAYAHAIGVSEGNAPLAQVRQQYLQDLE
                     NYYKYRHNNSTTGMQQLIDKYKPAAKP"
     gene            910..1482
                     /locus_tag="VIT19_07510"
     CDS             910..1482
                     /locus_tag="VIT19_07510"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEY5838866.1"
                     /translation="MSAKSDVTGALEAGLTDGSVLIRPYREADAPLLYAAVRESVAEV
                     SRWLPWCHENYSIEESRQFVSSREIASQGDEWYSFAVFSKDDQRFLGGVGLNFINRVH
                     QVANLGYWVRSSETGKGVASRAARLAAQFGFEQLGLHRIEILAAIPNLASQRVAERAG
                     AVREGVLRKRLLIGGVSQDAVLFSLVPEDL"
     gene            1522..>2303
                     /locus_tag="VIT19_07515"
     CDS             1522..>2303
                     /locus_tag="VIT19_07515"
                     /inference="COORDINATES: protein motif:HMM:NF001399.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase"
                     /protein_id="HEY5838867.1"
                     /translation="MSEGTGTRDLTREFLTYIQVEKGLSRNTLQNYARDISRLKTWAD
                     TKRKRIDQLDRKDLREWIASMSREGLAPSSIARAVSAARGFFRFLMLDRHVQRDPTED
                     IHTPQRSSHLPKFLTEEEMERLLRAPDIKNDVGVRDRAMLEVMYAAGLRVSEMCGLRV
                     ADVDLDGAIVTCHGKGSKQRRIPIGKSAVHWLQRYIAVRDRLGSNNPVLFLNRGRALT
                     RQLAWGIIKTHAATAQVPDISPHTLRHSFGTHLMQHGADSRSV"
BASE COUNT          512 a          637 c          703 g          451 t
ORIGIN      
        1 gcttgccccg gatgagggaa agctggtgga caagataaac gcagcacctg acccatccgg
       61 aaaactcgcg gccgctggtg aactgataaa gaagtacccg aagaccgcga tccgcggtca
      121 ggtcgtactg gagctcgcca ataaaattcg ggaagtgaaa gatgcggccc agaaactgac
      181 gctggcgcaa cagcttcaga ctatgttcaa cgagccggcc gacgaaaaaa cggtggtgct
      241 ggtggttgtc gatgctttgg ccgacgcgaa tcagctcgac caggcattcg ctaaaggttc
      301 agatttcctg acgcgcaatc cggaatcgat agaggttctg gttgagcttg tatcggtcgg
      361 cactgaggag gcgaaaaagc agaatacaaa gtttgtcgat caatcaattc gctacggtac
      421 gcaagcgatt gcgttggccg atgccaacaa gaagccggcg gactttgacg agacaacctg
      481 gcagcaattc aaaacgacca ccgtgccctc gctgttccag tcgctgggtc tgctttatat
      541 gattaagggc gcttcggccg aggccaaggc gagttacata aaggcatcgc agggggctcc
      601 gtctgatccc ttcaactttg tgatgatcgc ggcgctgatg aacgacgagt accaggcggc
      661 tgcaaaggct tatcagacga tggcggcagg cgcgcccaaa gaagcgcaac tgaaaaaagt
      721 ccaagcgttg ctcgacgccg ttatcgatgc ttacgctcac gcgatcgggg tgtcggaagg
      781 gaacgcgccg ctggcgcagg tgcggcaaca gtatcttcag gatctggaga actactacaa
      841 ataccggcac aacaactcga ccaccggcat gcagcagttg atcgacaagt acaagccggc
      901 ggccaagccg tgagcgctaa atccgatgtt accggtgcct tggaagctgg attgaccgat
      961 gggtcagttt tgatccgtcc gtaccgtgag gcggacgcgc cattgcttta cgcggccgtg
     1021 cgcgaatcgg ttgccgaggt ttcgcgatgg ctgccgtggt gccacgaaaa ttattcaatc
     1081 gaagaaagcc gtcaattcgt ctcgtcaagg gaaattgcca gtcagggcga tgagtggtac
     1141 agcttcgccg tattctccaa agacgatcaa cgattcctgg gcggcgtcgg cctcaatttc
     1201 atcaaccggg ttcaccaggt tgccaatctg gggtattggg tgcgcagcag cgaaacgggg
     1261 aaaggagttg catcgcgcgc ggcgcggctt gccgcccaat tcggtttcga gcagctcggc
     1321 ttacaccgga ttgagattct cgcggccatt ccaaaccttg ctagccaacg tgtggccgaa
     1381 agagccggcg ccgttcgcga aggtgtcctg cgcaagcggc tcttgatcgg tggcgtgtct
     1441 caggacgcag tcctcttttc gctagtgccc gaggatctat aagccgaaaa ccgcccgttg
     1501 cattgtgtta acatcccctc gatgtctgag ggcaccggca cacgagacct gacacgcgaa
     1561 ttcctgacgt atatccaggt cgagaaaggc ctttcccgca acaccctcca gaattatgcc
     1621 cgcgacatta gccggctgaa gacctgggcc gacacgaaac gaaagcgaat tgaccagctc
     1681 gatcggaaag acttgcgcga gtggattgcg tcaatgtcgc gcgaaggcct ggcgccgtct
     1741 tcgatcgccc gtgccgtcag cgcggcccgc ggcttctttc gtttcctgat gctggatcgg
     1801 cacgtgcagc gcgatccgac tgaagacatt cacaccccgc aacgcagctc acatctgccg
     1861 aagttcctga ctgaagaaga gatggagcgt ctgctgcgtg cgccggacat caagaacgat
     1921 gtgggcgtgc gcgatcgggc gatgctcgag gtgatgtacg cagccggctt gcgcgtttct
     1981 gagatgtgcg gtttgcgcgt cgcggatgtc gatttagacg gcgcgatcgt cacgtgtcac
     2041 gggaagggaa gcaagcagcg gcgcattccg attggcaaga gtgccgtgca ttggttgcag
     2101 cgatacatcg ccgtgcgcga tcggctgggc agcaacaatc cggttttgtt tctgaatcgc
     2161 ggacgcgcgc tgacgcggca attggcgtgg ggcatcatca agactcacgc ggcgacggca
     2221 caggtcccgg acatctcgcc gcacactctg cggcacagct ttgggacgca cctgatgcag
     2281 cacggcgccg actcgcgttc agt
//
LOCUS       DATDBY010000401         5446 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_413249, whole genome shotgun sequence.
ACCESSION   DATDBY010000401 DATDBY010000000
VERSION     DATDBY010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5446
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413249"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VIT19_07520"
     CDS             complement(<1..346)
                     /locus_tag="VIT19_07520"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF013255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEY5838868.1"
                     /translation="MALSGIALITGGAGFVGSHIATALVDAGARVRVVDDLSTGYLKN
                     LSHIESKIDFIEGSVGDAATLRSALRDVEWVFHEAAIPSVPRSVDRPRESHDASVNAT
                     FALLLAARDQKVR"
     gene            complement(353..1651)
                     /locus_tag="VIT19_07525"
     CDS             complement(353..1651)
                     /locus_tag="VIT19_07525"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HEY5838869.1"
                     /translation="MHIAVIGSGYVGLVTGACFAEFGVDVACVDVDADKIAQLNRGRA
                     PIYEPGLEQLIQKNLRAARLRFTTDLHSAVEPASVVFLAVGTPPKADGSADPSFINTA
                     AIDVARNIRSYKVVAMKSTVPVGTGKRLTELIKKNLPAPVPFSVVSNPEFLREGAAIS
                     DFMRPDRVVIGSGDEEATEVMRELYRPLYLIETPFVITSVEGAELTKYAANAFLATKI
                     SFINEIANLCEKVGCDVHDVARAIGMDRRIGSKFLHPGPGFGGSCFPKDTRALSVIGR
                     EYDSPMRIVDAVVEVNQRQRQAMFPKIEKLVGGVKGKRIVVLGLSFKPETDDMRDAPS
                     VDIIRALVEAGATVVAYDPVAQHEAEKLLPDIEYAKDEYAAATGADALVFLTEWNQFR
                     ALDMERIHGLMKTANIADLRNIYEPADMRALGFNYAGVGR"
     gene            complement(1768..2484)
                     /locus_tag="VIT19_07530"
     CDS             complement(1768..2484)
                     /locus_tag="VIT19_07530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838870.1"
                     /translation="MISRNWSRKSIAFAVTVAVLSVYSMVALAKPGEQKNSGELSVSG
                     QVTVNGQAAISGATVFSDSVITTAANSSAVVSLGKLGRVELLPNTTVKLSFTDASISG
                     NLNAGRLQVSTLAGTSAIVTTKDGAAVADASQAASFMVDVECGDMRVAAQAGLVELRA
                     AGKTSAVAAGTTETAGTPQPGTRCTRLSRPGMPGIGGGALAALLLAAGGAIAAAILAG
                     RSENNDLNFGGDVTVISPTK"
     gene            complement(2831..3397)
                     /locus_tag="VIT19_07535"
     CDS             complement(2831..3397)
                     /locus_tag="VIT19_07535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838871.1"
                     /translation="MHNVTRIVLLVLALTMAGGVAQAQRVEQSQFGPVVQAYLGYLRN
                     EQEVVDDRASRHEISTDYYRRNSNRIRALRQMAIRLVTKSENDYVPELEAVAADEMRS
                     LFEDPPSPRSLRVSQVVKNTFRYLGPVTSGEVFYVFARLDPYEQAALIESGNATEGPM
                     SSSSPESSAAKGQRVGDSSTRPRRSSPR"
     gene            3562..4821
                     /gene="coaBC"
                     /locus_tag="VIT19_07540"
     CDS             3562..4821
                     /gene="coaBC"
                     /locus_tag="VIT19_07540"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEY5838872.1"
                     /translation="MDEENDRKHRVALGVTGGIAAYKAIEVLRGLQRAGCEVRVAMTR
                     HACEFIQPLTFRSLSGSYVLVDDYAPDNPDPIAHITFSQTIDLLIVAPATANTLAKFA
                     NGVADDFLTSTYLACTAPVLVAPAMNTTMLEHPATQRNIEKLRADGVRIIEPDQGEMA
                     CGTIGPGRLSEPGRIVEVALDMLQTPRHAADLAGERILITAGATREPIDPVRFISNRS
                     SGRMGYAIAKAAHARGAKVTVVSGVTSVAAPAGVTVIETTTANEMHRAVMERAGDPTI
                     FIAAAAVADYTSVDTSTQKMKKTADTLELRLQRTPDILREVAGARRQGQLIIGFAAET
                     ENLLENAWEKLISKDLDAIVANDVSKAAGGFDSANNAIAILFRDRPDTVELPLMPKEE
                     AAHRILDEVVKLRKSQSSARTASAQKE"
     gene            4818..>5446
                     /locus_tag="VIT19_07545"
     CDS             4818..>5446
                     /locus_tag="VIT19_07545"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEY5838873.1"
                     /translation="MTSDQTKELSELLEQTREYVRYFGELGAETIGAEPASPNTSAPR
                     GLSSAQVEEPREIATALPASAPPPATSALFARMAPTRADVSARRSDGLFGELPVRPSL
                     PPSTETLEDIWRDIGPDCTRCALCSGRTQVVNTHGNPKARLMFVGEAPGADEDAQGKP
                     FVGRAGQLLTKMIEAMGLKREEVIIGNVNRCRPPGNRQPTLEEAAICRP"
BASE COUNT         1212 a         1618 c         1506 g         1110 t
ORIGIN      
        1 gccggacttt ctgatcgcgg gccgccagca acagggcgaa cgtggcattg accgaggcat
       61 catgagattc acgcggccga tccacggagc gtggaacgga cgggatagca gcctcgtgaa
      121 agacccactc tacatcgcgt agcgcgctcc tcaaggtcgc ggcgtcgcca acgcttccct
      181 caataaaatc aattttggat tcaatgtggc taaggttctt gaggtaaccc gtcgacaggt
      241 cgtcgacgac tcgaacacgc gcgccggcgt caacgagcgc ggtcgcgatg tgtgagccaa
      301 cgaaacccgc gccgccggtg atcagagcta ttcctgagag cgccatagtt gcttagcgtc
      361 caactcctgc gtaattgaat ccaagtgccc gcatatcggc aggctcataa atatttcgaa
      421 gatcggcgat gtttgcggtc ttcatcagcc cgtgaatacg ctccatgtcc aacgcgcgaa
      481 attgattcca ttcagtgaga aacacgagcg cgtcagcgcc agtagcagca gcgtactcat
      541 ctttcgcgta ctcaatatcc ggcaacagtt tttctgcctc gtgttgggcc accgggtcgt
      601 acgccactac cgtggccccg gcttccacca aagcgcggat gatatcaact gacggagcgt
      661 cgcgcatatc gtcagtctct ggcttgaagc taaggccaag gacaacgatt cgcttaccct
      721 tcacgccccc aaccagcttt tcgatcttcg gaaacatcgc ctgacgctgg cgctggttga
      781 cttctaccac ggcgtcgacg attcgcatcg gcgagtcgta ctcccttccg attaccgaca
      841 acgcacgcgt gtctttcgga aaacaagagc cgccaaagcc tggtccgggg tgcaggaatt
      901 tgctgccaat acgccgatcc atgccgatag cgcgggcaac gtcgtgaacg tcacagccga
      961 ctttttcgca taggttggcg atttcattga tgaacgaaat cttcgtcgca agaaaggcat
     1021 tcgcagcgta cttagtcagc tccgcgcctt cgacagaggt gatcacgaac ggcgtttcga
     1081 ttaaatacaa gggccggtaa agctcccgca tcacctcagt cgcttcctcg tcaccgctgc
     1141 caatcacgac tcgatcgggg cgcataaagt cgctgatcgc ggcgccttct cgcaagaact
     1201 ctggattgga aacgacgctg aacggtaccg gtgccggcag attctttttg attagttccg
     1261 tcagtcgctt gccagttccc accgggacag tggatttcat cgcaacgact ttataactac
     1321 gaatgttcct ggctacgtca atggccgcgg tattaatgaa gctaggatcg gccgagccat
     1381 cagcctttgg tggcgtgccc accgcgagga atacgacgga agcaggctcg acggctgagt
     1441 gaagatcggt agtgaatctt agccgcgccg cgcgaagatt tttttggatg agttgctcga
     1501 ggcccggttc gtaaataggg gcccggccgc gatttagttg ggcgattttg tcggcatcta
     1561 cgtcaacgca agcgacgtca acgccgaatt ctgcgaaaca cgctccagtg acaagcccta
     1621 cgtaaccaga gccaattacg gcgatgtgca ttcaggaata ttgtttaagc aaaagatacg
     1681 ggtcacgcgc atttagcgcg tgacccgcag tttacactca agtgccgcgc actcgggggc
     1741 acgccaccca gcaggattgt tcgcgtctta tttcgtcgga ctgattacgg taacgtctcc
     1801 gccgaaattc agatcattgt tctcggaccg tccggccaga atcgccgcgg caatcgcacc
     1861 acccgcagcc agcaacaagg ccgccagtgc gccgccaccg atgccaggca tgcccggccg
     1921 cgatagacgg gtgcagcgtg tgcccggctg aggcgttccc gcagtttcag tcgttccagc
     1981 agcgaccgcc gaggtcttgc cagcggctcg caactcaacc aagcctgcct gagcagcgac
     2041 tctcatgtca ccacattcga catcgaccat aaagctggcc gcttggcttg cgtcggcaac
     2101 cgccgcgccg tctttggtcg tgacgatggc ggacgtgcct gccaacgtcg aaacctgaag
     2161 acgaccagcg ttaagatttc ctgaaatgct ggcgtcggta aagctgagct ttacggtcgt
     2221 gttcggcaat aactctacgc gaccaagttt tccgaggctc acaaccgcgc tgctgttagc
     2281 cgcagtcgta atgacgctgt cggaaaatac tgtcgcaccc gaaatcgccg cttggccgtt
     2341 aacggtgact tggccggaaa ccgaaagttc tccggagttc ttctgctcgc cgggtttcgc
     2401 cagcgctacc atcgaataga cgctgaggac ggctactgtg accgcaaatg caatcgactt
     2461 gcggctccaa tttctgctaa tcatcatttc ctcccgtaga agtgacaaga taccttagaa
     2521 aacgcgctgc tgactcttta cgttccgagt agcgatcgct tgagttctgt tgaagaagct
     2581 ttttcgtggc gtaatagaag ccactgattc agtggctttt gtacacgaaa tccagccccc
     2641 ctgtcaacag gcaattcatt gaaaactcta aaacttaagc ccagaattac taggttcggc
     2701 gcacgatatc acggcctata ggtgctgtaa agggcttttt gcacttgtgg tgtcaagatt
     2761 ctgtgtcctt gcccgccaga tcaagggcag ccctcaaaaa tcagaaacgg taagtcagaa
     2821 gacgagcggg tcagcgcggg ctgctgcgcc gcggacgcgt cgagctgtcg ccgactcgtt
     2881 ggcctttggc ggctgaagac tccggggatg acgaactcat cggcccctcg gtggcgtttc
     2941 ctgattcgat caaagcggct tgctcgtaag ggtcaagccg cgcgaagaca tagaaaacct
     3001 ctcctgaagt taccggcccc aggtaacgaa acgtattctt tacaacttga ctgacgcgaa
     3061 gggagcgcgg gctcggagga tcttcaaaca ggctgcgcat ctcgtcggca gcgactgctt
     3121 cgagttccgg cacatagtca ttttcggatt tcgtcaccag acgaatggcc atctgccgca
     3181 acgcgcgaat acggttcgaa ttgcgccggt aatagtccgt ggaaatctcg tgccgactcg
     3241 cccggtcgtc aacgacttcc tgttcattac gcaagtagcc gaggtacgct tgcacgacgg
     3301 gcccgaattg agactgttcc acccgctgcg cttgcgcaac tccacctgcc attgtcagcg
     3361 ccagaaccaa caacacgatt cgcgttacgt tatgcattga agtccacccc cactgatcga
     3421 gacgcccgac tggaacgcgt atgcgttact ttagctcagg gaactttggt aagccagttt
     3481 cggttgcgcc gtgattatac gctcgcgcaa aatccaccaa tattgcaccc ataatttggc
     3541 ggtgttacat ttcgatttca catggacgag gagaatgacc gcaagcaccg cgtcgcactg
     3601 ggcgtgaccg gcggaatagc cgcttacaag gctattgaag tccttcgcgg cctacaacgc
     3661 gccggctgcg aggtccgcgt ggcgatgacc aggcacgctt gcgaattcat ccagcccctc
     3721 acctttcgtt cgctgtcggg ttcttacgtc ctggttgatg actacgctcc ggacaatccg
     3781 gatcccatcg cccacataac tttctctcaa accatcgatt tgctgattgt ggcgccggcc
     3841 acagccaata ccctggcgaa gttcgcgaac ggcgtagccg acgacttcct gacgtccaca
     3901 tacctggcgt gcacagcgcc ggtactggtc gcgccggcga tgaacaccac gatgttggag
     3961 caccccgcga cacaacgaaa tatcgagaag ctccgtgccg acggtgtgcg gatcattgaa
     4021 cccgaccagg gcgagatggc ctgcggaacg atagggccgg ggcgtctgag cgaacccggc
     4081 aggatcgtcg aggtggcgtt ggatatgctt cagactcccc ggcacgccgc cgatttggct
     4141 ggggagcgca ttctcatcac ggccggcgcc acgcgcgaac caattgaccc ggtgcgcttc
     4201 atttcaaata gatcgtccgg tcgaatggga tacgcgattg caaaagcggc gcacgctcgt
     4261 ggagccaaag tgacggtcgt ttccggcgtc accagtgtcg cggccccggc aggtgtgacc
     4321 gtcatcgaga caacaaccgc gaatgagatg catcgcgccg taatggaacg cgccggcgat
     4381 ccgaccatct ttattgccgc cgcggccgtc gccgactaca cgtccgttga cacgtccact
     4441 caaaagatga agaagacggc agacacactc gagctaaggc ttcaacgcac tcccgacatt
     4501 ctgcgtgaag tcgccggcgc ccgccgtcag ggccaactca tcatcggctt cgctgctgaa
     4561 actgaaaatc ttctcgagaa cgcctgggag aaattaatca gcaaggacct cgacgcgatc
     4621 gtggccaacg acgtttcaaa agccgcgggc ggatttgact cggctaacaa cgccatcgcg
     4681 attttgtttc gcgacagacc tgacactgtg gaattgccgc tcatgccgaa agaagaagct
     4741 gcgcatcgca tccttgatga agttgtgaaa ttgaggaaaa gccaaagcag cgcacgtaca
     4801 gcttccgcac aaaaagaatg acttcagatc aaacgaaaga gttgagcgaa ctgttggagc
     4861 aaacgcgaga atacgtccgc tatttcgggg aactcggcgc agaaacgata ggtgcggaac
     4921 ccgcaagtcc gaacacttca gcgccgcgcg gactctcttc ggcgcaggtc gaagagccgc
     4981 gggagatcgc aaccgcgtta ccagcctcgg ctccgccccc ggcaacatcg gcgctgtttg
     5041 cgcgaatggc tccaactcgg gccgatgtca gcgctcgacg atcagacggc ctgttcggcg
     5101 aactccctgt gcgaccgtcg ttgccaccct caacggagac tctcgaagac atctggcgcg
     5161 acataggccc cgactgcacc cgatgcgcgt tgtgctcggg gcgcacgcag gtcgtgaaca
     5221 cccacggcaa cccaaaggcc cgcttgatgt tcgtcggcga agctcctggt gctgatgaag
     5281 atgcccaggg caagccgttt gtcggccgcg cgggtcaatt gctgacaaag atgattgaag
     5341 cgatgggcct gaaacgcgaa gaagtgatca tcggcaacgt caatcgctgc cggccgccgg
     5401 gcaaccggca accgacgttg gaagaagcgg cgatctgccg tccgtt
//
LOCUS       DATDBY010000402         9917 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_414962, whole genome shotgun sequence.
ACCESSION   DATDBY010000402 DATDBY010000000
VERSION     DATDBY010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 9917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9917
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414962"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2347
                     /locus_tag="VIT19_07550"
     CDS             <1..2347
                     /locus_tag="VIT19_07550"
                     /inference="COORDINATES: protein motif:HMM:NF015140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="choice-of-anchor Q domain-containing protein"
                     /protein_id="HEY5838874.1"
                     /translation="LNITNSTFFNNSAGFGGGAAIANINNGTVNLTNSTFSGNSGAFG
                     GASIYRASGTVTLKNTIVANGVAGPNCQGTIVDGGGNLQFGGTVVNSCGASIATGDPQ
                     LGALMNNGGPADTMALGAGSVAVNLGNATTCSANAGTPAFGAGGKDQRGLNRRSGFCD
                     SGAFEAQPASNTVAGGSGQSTTLNTAFPIALQVAVRDANGNLLGGAAVAYTPPPSGPS
                     ATLAGNPTLTNATGVASVIATANAIAGGPYDVAANATGVAAVNFSLTNTVAPPSVTIA
                     KLSNGNAAKLPEPNSGSANMLFTVVLSVPAGAGGASVNYSTADEPAGPDKAVAAQDYT
                     PTSGTLTFASGEQTKIVAVPVLSDSDNAEPDETFRLNLSNPTNVTIVNGSGTGTILTT
                     NTPGTLLISELRAFGPGGTNDPNDDFVEIYNNTDSAHTVPAGGYGLFKTGADCNATPV
                     LIGTIAAGTVVPPRGHFLFTGAAYSLANYGGTNAVTGNASLTADLEANRNIALFATTN
                     ANEVSTANRLDAVGFGTNTGNVCDLFREGTNELAVTTNLTLLGQHSYFRQICAFQASC
                     PTPGRPKDTNDNSADFIFADTNGVSTSAGQKLGAPGPENLASPIKRDPVVDALLLDTS
                     VASHSAPNRVRDQNAVVNGTFGTLTLRRRIINNTGASVSRLRFRIVDITSFPSPGGGE
                     SDIRALTSATINGVNVGDSGTCAAQQPPAVAPCTVTVQGLTLEDPPAQANGGGMNATL
                     SSGTITLADPLAAGASVNVQFRLAVQTTGTFRFYVVIEALP"
     gene            complement(2403..2864)
                     /locus_tag="VIT19_07555"
     CDS             complement(2403..2864)
                     /locus_tag="VIT19_07555"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEY5838875.1"
                     /translation="MPELIRSAVSRARMYFKDRRRSPRLNVRLAFSLSVLRQTKLKRL
                     NSSDRTVKGHTRDISVNGLALLLPQIQLDGYHLAAEDREMQLVLELSGGVVSMVIVPK
                     RYEKLERAELGCNYLIGARIVRIDAEDRSRYQDFMNRVLEHGREKDGSGAN"
     gene            3065..4546
                     /gene="pyk"
                     /locus_tag="VIT19_07560"
     CDS             3065..4546
                     /gene="pyk"
                     /locus_tag="VIT19_07560"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: protein motif:HMM:NF004978.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEY5838876.1"
                     /translation="MRRAKILATLGPSTREPKILEAMLVAGVDGVRINMSHGTQEEKA
                     ADIRAARAAAEKTNRPLAILIDLSGPKIRTRTLKNHEPVMLLANQQFIITTRAIEGDN
                     TQVATNYDGMPRDVPPGARILLNDGAIELRVESITDTDIITRVINGGELGERKGINLP
                     GVPLPIPSLTQKDRDDVRWAATQDVDYFALSFVRTAADCMDAKRLIKETGRETPLVAK
                     IEKAEAIDHLGEILEVADGVMVARGDLGVETSVELVPVYQKRIIELANEAGKLVVTAT
                     QMLQSMVEEPRPTRAEATDVANAVWDGSDCLMLSGETATGKYPVAAVATMARIIETAE
                     TRDQERPSIMSKIAGRQTGRVSRALCEAAAFAADEMNTRLILAFTESGLMARRLSALR
                     PRQRIIAMTSSRNVMNVLNIIWGVEPALCMASKSAEELLKVGEKTLLDTGLVTHGEVI
                     VIMAGRLSGLGLSSSVSLYQIGGEMEDSIHSSTVSDRTKPPGS"
     gene            complement(4555..5490)
                     /locus_tag="VIT19_07565"
     CDS             complement(4555..5490)
                     /locus_tag="VIT19_07565"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5838877.1"
                     /translation="MTSRSKRLIILFVLFLLISPLHAYQHPAQDDNHLIMMSVVVWNR
                     SGLTKGLKREVFTVMDEKVVRPIEFFDDTDTPVSIGILVDNSGSMHPNIRGVTSKQDF
                     LGEELKQLLANGHPDNEYFLVSFNKTPKLLADWSSAKEMMALRFEIEEPKHDTALYDT
                     IFLALEKLHSGQRLRRALVLLSDGQDNASRRTFKEVRTSLRNADVTVYAVGIMGASDV
                     GSSLGIEGQGILDELSETTGGGSSYPTSRKELTTAFSTIAGELHHHYRLGFRPDKSDA
                     PNKWRRLKITVTIPPNAAPEFKNLSVRARSGYYTR"
     gene            complement(5508..6530)
                     /locus_tag="VIT19_07570"
     CDS             complement(5508..6530)
                     /locus_tag="VIT19_07570"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY5838878.1"
                     /translation="MRKSTFLKLKVREAAFISKALLSTNHVVLAHIIPMRRCNLACGY
                     CNEYDQTSKPVPLDVMKRRLDKLAELGTSVITISGGEPMMHPQLDDIIRHIRSHGMIA
                     GLISNGYYFTPDRIKRLNAAGLEYLQISIDNVDPDEVSRKSLRVLDKKLRYLAEHSDF
                     HININSVIGGGIKKPEDALTVAKRAVELGFSTTVGVIHDGDGTLKPLTEKEKEVFHAV
                     KKLGNKDHARLNWFQDSIAEGKPYEWRCRSGSRYLYICEDGKVHWCSQQRGFPGIPLE
                     EYSMEDFKREYKTEKWCAPTCTIQCVHQVGILDNWRDPQMPEAEVRREQQKKKEERMV
                     QILRPQ"
     gene            complement(6769..7476)
                     /locus_tag="VIT19_07575"
     CDS             complement(6769..7476)
                     /locus_tag="VIT19_07575"
                     /inference="COORDINATES: protein motif:HMM:NF015510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HEY5838879.1"
                     /translation="MKKFVPLILSIALLISAVAFLPAAPAHGQTAGLVSSIIGRLEKN
                     KRSLKSMRANITMTKYNSQLRDNDSYSGLVLYIPGAAGNSSAFVRLEWQRPKHEILAV
                     ANGNYTLYQPRLNQAYVGKTGRMKTERDSDVLALMNMSAAQLRTKFGEFQDVREETLW
                     GGVWTQHFRAIPTGSASYKYIEVWVDKDGMPVQTKMVEKNDDATTVRLSNVERNPSLP
                     MDQFKLNLGSGVKIIKG"
     gene            complement(7608..7916)
                     /locus_tag="VIT19_07580"
     CDS             complement(7608..7916)
                     /locus_tag="VIT19_07580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838880.1"
                     /translation="MSNTAKKIVFWNYQRTSWQWDVLCVLILVFIFLTPKSWFQNSEF
                     RPQRTVIISAELVGAQADTGTIERRARELTGRPEGQVKPPREIRDRTGKLIGYEVDIR
                     "
     gene            complement(8056..8757)
                     /locus_tag="VIT19_07585"
     CDS             complement(8056..8757)
                     /locus_tag="VIT19_07585"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5838881.1"
                     /translation="MASAAATGKKVAILKAERLEKTYRIGKVDVPALRGVSLEVQAGE
                     FVAVMGPSGCGKSTMLHLLGGLLTPTKGRIIIDGEDLTAASDAKRTDIRRRKIGFVFQ
                     RFNLFPTLTADGNLRLAERIHGNGAGDPERRREILGMLRLEDKMHHKPLELSGGEQQR
                     VALARAVITQPAIVLADEPTGNLDSENSAIVLNMFQELNRRFNQTIIMITHNPEAAAA
                     CGRIIQMRDGHIIAA"
     gene            complement(8759..9859)
                     /locus_tag="VIT19_07590"
     CDS             complement(8759..9859)
                     /locus_tag="VIT19_07590"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5838882.1"
                     /translation="MKVFDSLVTSNIRQRPMRSAISIIGVALGVALVMLFTGLTRGMS
                     NDLQRRSSNVRGEIIFTRKGSMHVTASSTNLSTKYVERLLQIEGVEAATPVIRHIYPS
                     GTLGFDQIEGVDWNEFARMNDLRIIDGRAPQGNYEVVIDQTKASRNHPVGSSLKIFGE
                     KLYTVVGIYVPESGARQKLALASLQETLEAPEKCTYILIKTKQTADPVAVARQIDQEL
                     PGNNVQFTKDVFASVESSIPSLGLFLRILVALAAVVSALVVMLAMHTTITERTREIGI
                     LKAMGASRAYIVGEIEREALLISALGLVLGFGIALGAGFLIHKSTGLLFEYGWNWALV
                     AAAIGLVGGAIGALYPAVRAANLDPVQALAYE"
BASE COUNT         2166 a         2865 c         2709 g         2177 t
ORIGIN      
        1 gctgaacata acgaacagca ctttctttaa caatagtgcc gggttcggcg gcggtgccgc
       61 gatcgccaac atcaacaacg ggacagtaaa cctcacgaat agcactttct ccgggaatag
      121 tggcgccttc ggcggcgcca gcatttatag agcttccggc actgtgaccc tgaaaaatac
      181 gattgtcgca aatggcgtcg cgggcccgaa ttgccaaggg acgattgtcg acggcggcgg
      241 caatttacaa tttgggggaa ccgttgttaa ttcctgcggc gcaagcatcg ccaccggcga
      301 tcctcagctc ggcgcactaa tgaacaacgg cgggcccgct gacacgatgg ccctcggcgc
      361 cggcagcgtg gccgtcaatc tcggaaatgc aaccacctgc tcagccaatg cgggcacgcc
      421 cgctttcggt gcgggcggaa aggatcaacg ggggctcaat cgacgcagcg gcttttgcga
      481 cagcggggca ttcgaagccc aaccagcctc gaacaccgta gccggcggat ccggacaaag
      541 cacgaccttg aacaccgcgt ttcccattgc cctccaggtt gccgttcgag acgccaacgg
      601 taatctgctc gggggcgcgg ctgtagctta cacgccaccc cccagcggcc cgagcgcgac
      661 cttggctggt aaccccacgc tgacgaatgc gaccggggtt gcttcggtga tcgccactgc
      721 gaacgcaatc gcgggcggac cttacgatgt ggcagcgaac gccactggtg tcgccgctgt
      781 taattttagt ttgacgaata ccgtcgcgcc tccatcagtc acgattgcaa agttaagcaa
      841 cggcaacgcg gcgaagctgc cggagccgaa ctcaggttct gcaaacatgc tgttcaccgt
      901 tgtgctttcg gtgccggcag gagccggcgg tgcgtcggtt aattacagta ccgcggacga
      961 acctgccggt ccggacaaag ccgttgctgc ccaggattac acgcctactt ccggcacgct
     1021 cacgttcgct tcaggcgagc aaactaaaat tgtcgcggta ccggtccttt ccgattcgga
     1081 caacgctgag ccagatgaaa ccttccggtt gaatctctcc aatccaacga atgtcacgat
     1141 cgttaacggc tcaggcacgg gcacgatcct gaccacaaac acaccgggca ccttgttgat
     1201 ttctgaattg cgcgccttcg ggccgggtgg gactaacgat cctaacgatg actttgtcga
     1261 gatttacaac aacacagatt cagcgcacac cgtacctgca ggtggctatg gcttgttcaa
     1321 gacgggtgct gactgtaatg ccacgccggt gctgattgga acaatagccg cgggaacagt
     1381 agtaccgccg cgcggccact tcctgttcac tggcgcagcc tattcgctgg cgaattatgg
     1441 cgggaccaac gccgtaacgg gaaacgcgtc gctcaccgcc gatctcgaag cgaaccgcaa
     1501 catcgctctc ttcgcgacga ctaacgcgaa cgaggtttct acagcgaacc gtcttgacgc
     1561 ggtgggcttt gggaccaaca ccggcaacgt atgcgatctg tttcgcgaag gcacaaacga
     1621 gcttgcggtc acgactaact taacgttgct tggacaacac agctacttcc gccaaatctg
     1681 cgcgttccag gcaagttgtc caacgccggg cagaccaaag gacacgaacg ataacagcgc
     1741 ggatttcatc tttgccgata ccaatggcgt gagcacctcg gccggacaaa agctcggagc
     1801 accaggacct gaaaacctgg cctcgccgat taaacgtgat ccagtggtag acgctttgct
     1861 gctggacacc tcggtggcgt cgcacagtgc tcctaatcgc gtgcgcgatc agaacgcagt
     1921 cgtgaatggg acattcggca cgttgacgtt aagacgacga atcattaata acactggcgc
     1981 cagcgttagc cgcttgcgat ttcgaattgt cgatattacg tcgtttccga gcccgggcgg
     2041 cggcgagtct gacattcgcg cactcacgtc cgccacgata aatggggtta acgtcggcga
     2101 ctcgggaacc tgcgcggccc agcaaccacc agcggtcgct ccctgcaccg tgacggttca
     2161 gggtttgacg ctcgaggacc cacccgctca ggcaaacggc ggcgggatga acgcgaccct
     2221 ttcatcggga acaatcacgc tggctgaccc attagctgct ggtgcgagcg taaatgttca
     2281 attccgtcta gccgttcaga cgactggcac gttccgtttc tatgtagtta tcgaggccct
     2341 gccgtagaag tcatcgtccg gcgaacttct tccactcctg caggtgttcg gttggctcgt
     2401 gttcagttag cgccggatcc gtctttctcc cggccgtgct caaggacgcg gttcatgaaa
     2461 tcctgataac gacttcgatc ttctgcatcg atgcgaacga ttcgcgcgcc aatcagatag
     2521 ttacaaccga gttctgcccg ctctaacttt tcataacgct tgggcacgat gaccattgaa
     2581 acgacaccgc cggagagctc cagcaccaac tgcatttctc ggtcttcagc cgccagatga
     2641 tagccatcga gctgaatctg cggcagtagc aacgccaacc cattcacgct gatgtcgcgc
     2701 gtatgtcctt tgaccgtgcg gtcggacgag ttcagtcgct tcagcttagt ttggcggagc
     2761 actgacagcg aaaaagcgag tcgcacatta aggcgcggcg agcgccggcg atccttgaaa
     2821 tacatgcgcg cgcgggacac cgctgaacgg atcaattctg gcacgggcta acctttctgt
     2881 gtcggagggg gcaaatctga ctaagtcgtc tgaggggcag acgcggggcg cgcactgcta
     2941 accaatatta gctgttgcga acacgtgcgg caatagacat tttccgtcgt gtcctgattt
     3001 ccggaaaagc ctttcaaaag ggtatagttc tgaccattcc tatcgcaaaa ggttcagaat
     3061 ttacttgaga cgagcaaaaa tcctcgcgac cctcggccct tcaacacgag agccaaagat
     3121 acttgaagcc atgctggtgg ccggggtgga cggcgtgcgc ataaacatgt cgcatggcac
     3181 gcaggaagaa aaagcggcgg acattcgcgc ggcgcgcgcg gcggcggaaa agacgaaccg
     3241 gcctttggca atcctcattg atctctcggg gccgaaaatt cgcacccgca cgctcaagaa
     3301 tcatgagccg gtaatgctgc tcgcgaatca acagttcatc atcactaccc gcgctattga
     3361 aggtgataac acccaggtag ccacgaacta cgacggcatg ccgcgcgatg tgcctccggg
     3421 tgcgcgcatc ctgctgaatg atggcgccat tgagttgcgc gttgagagca tcactgatac
     3481 cgacatcatt acgcgcgtca tcaacggcgg tgagttgggc gagcgcaaag gcatcaacct
     3541 tcctggcgtc cccctaccga taccttcact gacgcaaaaa gatcgcgatg acgtccggtg
     3601 ggcggcgact caggatgtgg actacttcgc gctttcattc gtgcgcaccg ccgccgactg
     3661 catggacgcg aagcgcttga tcaaagaaac gggcagggag actccgctcg tggcaaagat
     3721 cgaaaaggcc gaagcgatcg atcatctggg cgagattctc gaggttgccg atggcgtgat
     3781 ggtcgcgcgc ggcgacctgg gcgtcgaaac cagcgttgag ctggtgcccg tatatcaaaa
     3841 gcgaatcatc gagttggcaa atgaagccgg caagctggtc gtgaccgcga cgcagatgct
     3901 gcagtcaatg gtggaagaac cgcggccaac gcgcgcggaa gccacggacg tcgccaacgc
     3961 cgtgtgggat ggctcagact gcctaatgct ttcgggcgag accgcgacgg gaaaataccc
     4021 ggtcgctgcc gtcgcgacga tggcgcgcat tatcgagacc gccgagaccc gcgatcagga
     4081 acgaccaagc atcatgagca agattgccgg ccggcaaacg ggccgtgtga gccgcgcgct
     4141 gtgcgaggcc gctgcgttcg ccgccgacga gatgaacacg cgcttgatcc tggcgttcac
     4201 ggaatcaggc ttaatggcgc ggcggttgtc ggccctgcgg ccacgccagc gaattatcgc
     4261 catgacgtcc tctcgcaatg taatgaacgt gctcaacata atctgggggg tcgagccggc
     4321 gctttgcatg gcttcgaaaa gcgctgagga attattgaag gtcggcgaaa aaaccctgct
     4381 cgataccggg ctggttacgc atggcgaggt aattgtgatt atggccggaa gactttccgg
     4441 actgggcctg tcgagttcag tttcgctgta tcagattggc ggtgagatgg aggattcgat
     4501 tcactcttca acggtctcgg atcgcacgaa gccgccgggt tcctagttcc cacttcaacg
     4561 agtgtagtag ccggaccgag ctctaaccga aaggttcttg aactcaggcg cagcatttgg
     4621 cggtatggtt actgtgatct tcaatcggcg ccatttattt ggggcatcac tcttgtcggg
     4681 tcgaaatccc aaccgataat ggtggtgtag ttcgccggcg atcgttgaaa acgccgttgt
     4741 cagttcctta cggctggtcg gataggacga gccgccgccg gttgtttcac ttagctcatc
     4801 gagaatgccc tgcccttcga tccccagcga cgaacccaca tcgctagcac ccatgattcc
     4861 gacggcgtaa acggtaacgt cagcgttcct cagcgaggtt cgcacttcct tgaaagtgcg
     4921 tcgagatgcg ttgtcctggc cgtcagaaag taagaccagc gcccgtcgta accgttgacc
     4981 gctgtgaagt ttctcaagag ccaaaaagat cgtgtcgtac aatgccgtgt cgtgtttggg
     5041 ttcttcaatt tcgaacctca gggccatcat ttccttggca gagctccaat ccgccagcag
     5101 cttaggagtc ttgttaaagg agacgagaaa gtattcgtta tccggatggc cgttcgcaag
     5161 gagctgctta agttcttcac ccagaaaatc ctgtttggaa gtcacgcccc gtatattcgg
     5221 atgcatggac ccggaattgt ctactaggat tccgatacta acaggcgtgt cggtatcgtc
     5281 gaaaaactca attggcctca ctaccttctc atccatcacg gtaaacactt cccgcttcaa
     5341 accctttgtg agacctgagc ggttccacac gacgaccgac atcatgatca gatggttatc
     5401 gtcttgtgct gggtgctggt atgcgtgaag aggactaatt aagagaaaga ggacaaacag
     5461 aattatcagt cgcttggacc gggaggtcat ttgttctgca cgtggggcta ctgcggacgg
     5521 aggatctgca ccatccgctc ttcttttttc ttctgctgct ctcttctcac ttcggcttca
     5581 ggcatctgtg ggtcgcgcca attgtcgaga attccgacct ggtgcacaca ctgaatggta
     5641 caggtgggcg cgcaccattt ttcggtcttg tactcgcgct tgaaatcttc catcgagtac
     5701 tcctcaagcg gaattccggg aaagccgcgc tgctgagagc accagtgaac tttgccgtct
     5761 tcgcaaatgt acaggtagcg cgagcctgaa cggcaacgcc actcgtaagg tttgccttcg
     5821 gcgatgctgt cctgaaacca attcagccgg gcgtgatctt tattgccgag cttcttcacc
     5881 gcgtgaaaga cttccttctc tttctcggtc agcggcttta aggttccgtc tccgtcatga
     5941 atcacgccca ctgtcgtcga gaagccgagt tccaccgctc gtttggccac cgtcaatgcg
     6001 tcttcgggct ttttgatacc tccgccaatc actgaattga tattgatgtg aaagtcagag
     6061 tgctctgcca ggtaacgaag ttttttgtct agcacgcgca ggctcttgcg cgaaacttcg
     6121 tccggatcga cattgtcgat gctgatttgc aggtattcca gacccgccgc attcagacgt
     6181 ttaatgcgat ccggggtgaa gtaataaccg ttcgaaatca gccccgcgat cattccgtgc
     6241 gaacgtatgt ggcgaatgat gtcgtcgagt tgaggatgca tcatcggctc gccacctgag
     6301 atggtgatga ccgaggtgcc gagttccgcc agcttatcca gtcgccgctt catcacgtcg
     6361 agcggcaccg gcttcgacgt ctgatcgtat tcattgcaat agccgcaggc gagattacaa
     6421 cgacgcatcg gaatgatgtg cgccagcaca acgtggttcg tcgaaagcag cgccttgctg
     6481 atgaatgcgg cttcacgaac ttttaacttt aggaaggtgc tcttgcgcat ctcgatatgt
     6541 cagaacccgc agcgtgtcag tacccggagc ggtagcgacg gggtcaaaga ctcaactcgg
     6601 tgtttgaaga atatgctgag cgcttttgta gcgcaagttg gtaacttgcc cacgtgcaaa
     6661 cccggcaatt atgcggggta atagcccggt ggctacagat gcttgcgcta taaacgcgaa
     6721 gggcttcggt ttcccaaagc ccttcttcat tgaaactgta accgcagctt atcccttgat
     6781 gatcttgacg cccgagccaa ggttcagctt gaactgatcc atcggcagcg acgggttgcg
     6841 ttcgacattg ctcaaccgga cagtggtcgc gtcgtcattc ttctcaacca tcttggtctg
     6901 caccggcatg ccgtccttat cgacccatac ttcgatgtat ttataactgg ccgatccagt
     6961 tggtatcgct ctgaagtgct gtgtccaaac tccgccccaa agcgtctctt cgcgcacgtc
     7021 ctggaattcg ccgaacttcg tgcgcagctg cgccgccgac atattcatca gcgccagcac
     7081 gtcgctgtca cgttctgtct tcattcttcc agtctttcca acgtacgcct ggttcagtcg
     7141 cggctggtat agcgtgtagt tgccgttggc aaccgccaga atctcatgct tcggacgctg
     7201 ccactcaagc cggacgaatg cgctgctgtt gccagccgcg ccgggaatgt agagcacgag
     7261 gccagagtag gaatcgttgt cgcgcaactg cgaattgtat ttcgtcatcg tgatgttggc
     7321 gcgcatcgac ttcaggctgc gtttgttctt ctccagccgg ccgatgatag agctgactaa
     7381 tcccgcggtt tgtccgtggg caggcgcagc ggggagaaat gccacggctg aaatcagcaa
     7441 agcgatcgat aaaataaggg gaacgaactt tttcataata cctttcctca gcaaaactct
     7501 ttccttacca aaacttaagg cccatacggg ccccgggttg agatgccgaa cgtaccatcc
     7561 tggatgcgct agcccggcta atgatgcccc gaaattatag agtatggtca gcggatgtca
     7621 acctcatatc cgattaactt tcctgtcctg tcccggatct cacggggtgg cttgacctgg
     7681 ccttcaggcc tgccagtaag ctctcttgcg cgacgctcga tagtgcccgt atccgcttgt
     7741 gcgccaacaa gttcagccga gataatcacc gtccgttgcg gccgaaattc actgttctga
     7801 aaccatgatt tcggggtcag aaagatgaaa accaggatta acacgcacaa tacatcccac
     7861 tgccatgacg tgcgctgata gttccaaaac acaatctttt tggctgtatt cgacaagaag
     7921 ctcatggtcg cgactgggcg caatctatcc gaaccagccg cggttgtcga gtgcaatcgc
     7981 agggccgctc cgacattcgc gaaaactcag gtgaacgcga caccgacctg cagcaaaact
     8041 tatccaggag agagactacg cggcaatgat gtggccgtcg cgcatttgga tgatgcggcc
     8101 gcaagcggcg gcggcttcag gattgtgggt gatcatgatg atcgtttggt tgaagcgccg
     8161 attgagctct tgaaacatgt tcagcacgat ggctgaattt tcagaatcga ggttcccggt
     8221 cggctcgtcc gccagaacga tcgcgggctg agttatgact gcacgagcca gggcgacgcg
     8281 ttgctgttcg ccgcctgaca attccagcgg cttgtgatgc atcttgtctt ccagtcgcag
     8341 catccccaga atttcgcgtc gtcgctcggg atcgcccgca ccattgccgt gtatccgctc
     8401 tgccagtctc aggttaccgt cagcagtcag cgtgggaaac agattaaacc gctgaaatac
     8461 gaaaccgatc ttgcgccggc gaatgtcggt tcgttttgca tctgaagcgg ccgtaaggtc
     8521 ttcgccatcg atgatgatgc gccccttcgt cggagtcagc agtccaccca gcaagtgcag
     8581 catcgttgac ttaccgcatc ccgacggccc catcacggcg acgaactctc cggcctggac
     8641 ctcgagcgac acaccgcgca atgccggcac gtcgactttg ccgatgcgat aagtcttttc
     8701 gagtctttcg gctttgagaa tcgccacttt ctttcctgtt gctgccgcgg acgccattct
     8761 attcgtatgc caacgcctgc accggatcaa gattcgccgc acgcacggcc ggataaagag
     8821 cgccgatggc gccacctacc aatccaattg ccgcggcgac cagcgcccag ttccatccgt
     8881 attcaaaaag caggccagtc gatttgtgaa tcaggaatcc cgctcccaac gcgattccaa
     8941 aaccgagaac cagtcccagg gcgctgatca aaagggcctc ccgttcgatc tcgccgacga
     9001 tgtaagcgcg cgaagcgccc atggctttca agatgccaat ctcacgagtg cgttcagtga
     9061 tagtggtgtg catcgccagc atcacgacca gcgcactcac gactgccgcc agcgcgacga
     9121 gaatccgcag aaagagtccc agactcggga ttgaactttc gacactggca aacacgtcct
     9181 tcgtgaattg cacgttgttg ccgggtagtt cctgatcgat ttgtcgcgca acggcgacgg
     9241 gatcagccgt ttgtttcgtc ttgatcagga tgtaggtgca cttttccggg gcctcgagcg
     9301 tttcctgaag tgacgcaagc gccaactttt ggcgagctcc cgactccggc acgtaaatcc
     9361 ccaccaccgt gtacagcttt tcaccaaaga ttttcaaact gcttccgacc ggatggttcc
     9421 gcgacgcctt cgtctgatca ataaccacct cgtaatttcc ctgcggcgcg cgcccgtcga
     9481 ttatccgcag atcattcatc cgcgcaaatt cattccagtc aacgccttcg atctgatcga
     9541 atcccagcgt tccgcttgga taaatgtgcc gaataaccgg tgtggcagct tcaactcctt
     9601 caatttgcag aagccgctcg acatatttcg tgctcagatt cgtgcttgac gcagtaacgt
     9661 gcatcgaccc cttgcgcgta aatatgatct cgccacgaac gttgctcgat cgccgctgca
     9721 aatcgttcga catgcctcgc gtcagtccgg tgaacagcat caccagcgcc acgcccagcg
     9781 ccacgccgat gatgctgatc gcagaacgca tgggccgctg ccgaatgttt gaggtgacca
     9841 gactgtcgaa gactttcatg ctgcttacaa acgcaaaatt ttaacccaag cgcaggcgtt
     9901 cggcctaacg agtcgtt
//
LOCUS       DATDBY010000403         3591 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_212950, whole genome shotgun sequence.
ACCESSION   DATDBY010000403 DATDBY010000000
VERSION     DATDBY010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3591
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212950"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..615
                     /gene="rplB"
                     /locus_tag="VIT19_07595"
     CDS             <1..615
                     /gene="rplB"
                     /locus_tag="VIT19_07595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEY5838883.1"
                     /translation="DGVPGRVTQIEYDPNRSSNIALITYLDGEKRYIIAPVGLEVGKT
                     IASGEEADILPGNTLPIRNIPLGTQIHNIELRPGKGGQMARAAGSFAQLLAKEGLYAQ
                     LRMPSGEVRRVPVECRATVGQVGNVEHENVSLGKAGRTRWKGIRPHVRGVAMNPVDHP
                     HGGGEGKTSGGRNPVTPWGQPTRGYKTRHNKRTKKMIVRDRRVK"
     gene            680..1018
                     /gene="rpsS"
                     /locus_tag="VIT19_07600"
     CDS             680..1018
                     /gene="rpsS"
                     /locus_tag="VIT19_07600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002633604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEY5838884.1"
                     /translation="MPRSLKKGPWIDKGVRKMVERVRAGGQRPQVIKTWSRRSTITPD
                     MVGLTFGVHNGKRHIPIYVTENMVGHKLGEFSPTRTFRGHSGTKAEKSEKSAKVSPAG
                     GGSAPAASAA"
     gene            1064..1663
                     /gene="rplV"
                     /locus_tag="VIT19_07605"
     CDS             1064..1663
                     /gene="rplV"
                     /locus_tag="VIT19_07605"
                     /inference="COORDINATES: protein motif:HMM:NF012462.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEY5838885.1"
                     /translation="MEARASAKFLRGSPQKARLVIDMIRGKNVNQALAILRYSNKRAA
                     LGIEKCVKSAIANANEAAEKANVSVDPDELWLKAAYVDDGPTKGRRRLRPAPQGRAFR
                     QQRHFCHVTILLSSDQPGENGKKESAVTPAMSKKAKRGGAAAAPRAKHGTSKAEPAEA
                     APEVSEAPEKKAAPKKTGAKKAAAKLGSALKRKKKTDEE"
     gene            1720..2454
                     /gene="rpsC"
                     /locus_tag="VIT19_07610"
     CDS             1720..2454
                     /gene="rpsC"
                     /locus_tag="VIT19_07610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016654883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEY5838886.1"
                     /translation="MGQKVHPYGFRLGYNKDWHSHWFAKKQYGDFLIEDLRLKRELKR
                     RFTGAGVSHVDIERAANRLKIIIYTSRPGIIIGRKGAEIDKLKGDISSRTGREVLVSI
                     QEIHKPELNAQLQAEKIAAQLEKRIAFRRAMRKAVEESLRFGAQGIKVKVSGRLNGAE
                     IARSEWHLQGQLPLHTLRSDVDYGFAEAHTTFGIIGVKCWIYRGQILDAKAAMARGTG
                     TDPINETPRPREGRARPRPRRERTEG"
     gene            2501..2929
                     /gene="rplP"
                     /locus_tag="VIT19_07615"
     CDS             2501..2929
                     /gene="rplP"
                     /locus_tag="VIT19_07615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEY5838887.1"
                     /translation="MLMPKKVKHRKQMRGRMKGVAHRGSMISFGEYGLKTLEAAWITD
                     RQIEAARIAMTRHIKRGGKIWIRMFPDKPVTKKPAETRMGKGKGAPEYWVAVVKPGRI
                     LYEIEGVDEKTARDAMNLASQKLPVKTKFVTRAEQEGGAI"
     gene            3012..3224
                     /gene="rpmC"
                     /locus_tag="VIT19_07620"
     CDS             3012..3224
                     /gene="rpmC"
                     /locus_tag="VIT19_07620"
                     /inference="COORDINATES: protein motif:HMM:NF013027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEY5838888.1"
                     /translation="MKRREEVDKLRDMPDEDLQAEAVRLKESLFRLNFKLALGEIDAV
                     KKMREEKRSMARLRTIAREREIKAGK"
     gene            3294..>3591
                     /locus_tag="VIT19_07625"
     CDS             3294..>3591
                     /locus_tag="VIT19_07625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838889.1"
                     /translation="MFRRKKKDEPTDAPPMPEVAPEAASETAAAEPAAVETPVAESVS
                     AETPSADTPAAGNGAEPAAAASAKPAKSARGNRVQKIGTVASDKMQKTVVVRVDR"
BASE COUNT          878 a          908 c         1184 g          621 t
ORIGIN      
        1 gacggcgtgc ccggacgcgt gacgcagatt gaatacgatc cgaaccggtc gtcgaacatc
       61 gccctgatta cttatcttga tggcgagaag cgctacatca tcgcgccggt cggattggaa
      121 gtcggtaaaa cgattgccag cggcgaagaa gcggacattc tgccgggtaa taccttgccg
      181 attcggaata ttccgctggg cacgcagatt cacaatattg aattgcggcc cggcaaaggc
      241 ggacagatgg cgcgcgccgc cggttcgttt gcgcagctgc tcgcgaaaga aggtctgtac
      301 gcgcagttgc gcatgccttc gggcgaagtt cggcgagtgc cggttgagtg tcgcgcgact
      361 gtcggacagg ttggcaacgt cgagcacgaa aacgtttcgc tcggtaaagc cggccgcacg
      421 cgctggaaag gaattcggcc gcacgtgcgt ggcgtcgcga tgaacccggt cgatcacccg
      481 cacggcggtg gtgaaggaaa gacttcgggc ggccgcaatc cggtgacgcc ctggggacag
      541 ccgacgcgcg gctacaagac gcgtcacaac aagcggacta agaaaatgat tgtgagggat
      601 cggagagtta agtaattggt ccattgactc attggttcat tgaatcaatg actaaatgca
      661 tcaatgcgca aattaagcta tgccacgttc actaaaaaaa ggtccctgga tcgacaaagg
      721 tgttcggaag atggtcgagc gcgtgcgcgc aggcggacag cggccgcagg tgattaaaac
      781 ctggtcgcgt cgctcgacga ttacgcccga catggttggg ctgacgttcg gcgtacacaa
      841 cggcaaacgc catattccga tctacgtaac tgagaacatg gttggacaca agcttggcga
      901 gttctcgccg acgcgcacgt tcaggggcca ttcaggaacc aaggctgaaa agtcggaaaa
      961 gtccgcgaag gtctcgccgg ctggcggagg atcggcaccc gctgcctcgg ctgcataaga
     1021 cgcataggtc gcatgggacc tataggacct atttggtaaa gcaatggaag caagagcaag
     1081 cgcaaagttt ttacgtgggt cgccgcagaa ggcgcggctg gtcatcgaca tgatccgcgg
     1141 caagaacgtc aaccaggcgt tggcgatcct gcgttactcg aacaagcggg ccgcgctggg
     1201 cattgagaag tgcgtgaagt cggcgatcgc aaatgcgaac gaagcggctg agaaagcgaa
     1261 cgtctcggtc gatccggacg agctttggct gaaggctgct tacgtcgatg atggccccac
     1321 taagggtcgt cgccgtctgc gcccggcgcc acaaggtaga gcgtttcgcc agcagcgtca
     1381 cttttgtcat gtgacgattc tgctgtcgag cgatcagccc ggcgagaacg ggaaaaaaga
     1441 atcggcagtg acgccggcca tgagtaaaaa agccaaacgc ggcggcgcgg cggccgcgcc
     1501 cagagcgaaa cacgggacgt cgaaagcgga accggcggag gccgcgcccg aggtgagtga
     1561 agcacccgag aagaaagcgg cgccgaagaa aacaggcgcg aagaaggctg cggcaaagtt
     1621 gggcagcgcg ctgaaaagga agaagaagac ggacgaagag taggaatgct gaatctcaag
     1681 gcttgagatt caggattcag attcgaacgg agtaactgag tgggccaaaa agttcatcca
     1741 tacggttttc gccttggcta taacaaggac tggcattcgc actggtttgc gaaaaagcaa
     1801 tacggcgatt tcctgatcga agacctgcgt ttgaagcgtg agttgaagcg acgctttacc
     1861 ggtgccggcg tgtcgcatgt ggacatcgaa cgcgcggcga accgtctgaa gatcatcatc
     1921 tacacgtcgc gacccgggat catcatcggc cgcaagggcg cggagatcga caagctgaag
     1981 ggtgacatct cttcgcgtac cggccgcgag gtgctggttt cgattcagga gattcacaag
     2041 cccgagctga acgcgcagtt gcaggctgag aagattgcgg cgcagctcga aaagcgaatt
     2101 gcttttcggc gcgcgatgcg aaaggccgtg gaagagtcgc tgcgctttgg cgcgcaggga
     2161 atcaaagtca aagtcagcgg ccgtctgaac ggcgcggaaa tcgcgcggag tgagtggcac
     2221 ttgcagggcc agcttccctt gcacactttg cgttcggatg ttgattacgg atttgctgaa
     2281 gcgcacacaa cgttcggcat tatcggcgtg aaatgttgga tttatcgcgg ccagattctc
     2341 gacgcgaagg cggcgatggc gcgcggcacc ggtacggatc cgataaacga aacgccgcgc
     2401 ccgcgcgaag gtcgcgcccg gccgcgtccg cgcagagaaa gaacggaagg gtaggagttt
     2461 tagatctcaa acgtgagatc tgagatttga gaaaacagct atgttgatgc cgaaaaaagt
     2521 taagcatcgc aagcagatgc gcggccggat gaaaggcgtc gcccaccgcg gcagcatgat
     2581 cagcttcggc gagtatggcc tgaagacttt ggaggccgcc tggattacgg atcgccagat
     2641 cgaagcggcg cgtattgcga tgacgcgtca catcaaacgc ggcggcaaga tttggatacg
     2701 gatgtttccc gacaagccgg tgacaaagaa gccggccgaa acgcgcatgg gtaaaggcaa
     2761 gggcgctccc gaatactggg tggcggtcgt gaagcccggt cggattcttt acgaaatcga
     2821 aggggttgat gaaaagaccg cgcgcgacgc gatgaatctg gcgtcacaga agctgcccgt
     2881 gaagacgaag tttgtcacgc gagccgagca agaggggggc gccatctagt ttgcagtttt
     2941 cagttcgcag ttttcagttg gtttgctgaa aacttaaaac tgaacactta aaactcgacg
     3001 acgagcgaac gatgaagaga cgcgaagaag ttgataagtt acgcgacatg cctgacgagg
     3061 atttgcaggc tgaagcagtg cgcctgaaag agtctctgtt ccgcttgaat ttcaagctgg
     3121 cgctgggcga aatcgacgcg gtgaagaaga tgcgcgagga aaagcggtca atggcgcggc
     3181 tgcgcacgat tgcgcgcgag cgcgagataa aggccggcaa gtaaacctga ggtgcgcact
     3241 cctccggagt gtcgccgatt aagcacgccg gaggcgtgcg taccgagtag acgatgttta
     3301 gacgaaagaa aaaagacgaa ccgactgatg cgccgcccat gccggaagta gcgcccgaag
     3361 cggcgagcga gacggctgcg gctgaaccgg cagcggttga gactccggtg gcagagagtg
     3421 tttcggcaga gacgccgagc gctgacacgc ctgcggctgg caacggcgcg gaaccggcgg
     3481 cggccgcgag tgccaagccg gcgaagagcg cgcgcggcaa tcgagttcag aagatcggca
     3541 cggtcgcgtc agacaagatg cagaagacgg tcgtggtgcg agtcgatcgt c
//
LOCUS       DATDBY010000404         2828 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_799711, whole genome shotgun sequence.
ACCESSION   DATDBY010000404 DATDBY010000000
VERSION     DATDBY010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2828
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_799711"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..469
                     /locus_tag="VIT19_07630"
     CDS             <1..469
                     /locus_tag="VIT19_07630"
                     /inference="COORDINATES: protein motif:HMM:NF012436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEY5838890.1"
                     /translation="HMAEQDFDKKAVVALLNEILETELAGVVRYTHYSLMIFGHNRIP
                     IVSWLRGEANVCLAHANAAGELVTHLGEHPSLKIGALLESEQHSVQDILLESLEAEKT
                     GLALYKRLLEVVRDRSIFIEEYARRMIAEEEMHMGEVNKMLRKPGEIHRFKSE"
     gene            479..823
                     /locus_tag="VIT19_07635"
     CDS             479..823
                     /locus_tag="VIT19_07635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838891.1"
                     /translation="MPRPERTVESLRLLQDWSKWLISLETVVCISLWPKLTSTPAPPG
                     LMYAGWMMFWASIIVAAILLLCISLFVRRVDESGDRDIKIVWLMVGAQYACFLLGLAC
                     FALNLMLFWLGL"
     gene            1157..1552
                     /locus_tag="VIT19_07640"
     CDS             1157..1552
                     /locus_tag="VIT19_07640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838892.1"
                     /translation="MIFACVLRRPAKIVSVCASKDLTRDTGYVQYRFGSPAKIELEFP
                     KDRTGTQQKFEYTHYMRALVDLNEINFSVDGVDYSVVDDYNAEEKPAQSIEGITINWP
                     GTSKKEVRYSCRTKPKTDYTDLQAVLEHN"
     gene            complement(1506..2279)
                     /locus_tag="VIT19_07645"
     CDS             complement(1506..2279)
                     /locus_tag="VIT19_07645"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5838893.1"
                     /translation="MLPQLRLSQSSTPYSVGRLVTRPKTVFDLAVGPLTTAGNGVKRR
                     WLRERRRRKVGRAYDMALEIARVIPRGSEVLDVGCGNGYIAHHLSAMLGRAVRGIDVA
                     DSTEAPIDYRQYNGREFPAPDSSFDAVVFAYVLLHAQDVHRMLAEMKRVLRPGGVAII
                     YEDIPATAWDRFICWTHDLKWRKRAGACTFRSELDWLNVFESAGFEIIRERQLSRLRN
                     LMHPVCRRLFLLQNQPVQSAIVAEISCAQARPANPCSQS"
     gene            complement(2461..>2828)
                     /locus_tag="VIT19_07650"
     CDS             complement(2461..>2828)
                     /locus_tag="VIT19_07650"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070009 - serine-type aminopeptidase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HEY5838894.1"
                     /translation="KRIAPFTTLGGLYDRSAKFNQKFPYNLPPRWTEKKSAVNLTTPF
                     NFVSTDDIIGGNSGSPTINKNGEIVGLIFDGNIQSLIGDFHYDETVNRAISVDVRAMQ
                     EILRKLFDANHIADELTKG"
BASE COUNT          639 a          807 c          797 g          585 t
ORIGIN      
        1 acacatggca gaacaggact tcgacaagaa agccgtcgtc gcgcttctaa atgaaatctt
       61 ggaaaccgaa ctcgccggcg tcgtgcgcta cacgcactat tcgctgatga ttttcggcca
      121 caaccgcatt ccgatcgtga gctggctgcg cggcgaagcc aacgtctgcc tggcacacgc
      181 gaatgcagcc ggcgagctgg tcacgcatct cggcgagcat ccttcactca agattggcgc
      241 cttgctcgag agcgagcagc attcggttca ggacattctg ctggagtctt tggaagctga
      301 gaagaccgga ctggccctct acaaacgttt gctcgaggtc gtgcgcgacc gatccatctt
      361 cattgaagag tacgcgcgca gaatgatcgc cgaagaagaa atgcacatgg gcgaagtcaa
      421 caagatgctg cgcaagccgg gtgagatcca ccggttcaag tcggaataaa tttccctcat
      481 gccgagaccc gaacggactg ttgagtcact gagactgctt caggattgga gcaagtggct
      541 catcagtctc gagacggtag tctgcatcag cctttggcca aaactaacca gtacacccgc
      601 gccaccaggc ctgatgtatg cgggctggat gatgttttgg gcgtcgatca tcgtcgccgc
      661 aatccttctg ctgtgcatct cgctgttcgt gcggcgcgtg gacgagtcag gcgatcgcga
      721 cataaaaatt gtctggctca tggttggcgc gcagtacgca tgcttccttt tgggcctcgc
      781 ttgctttgct ttgaacctga tgctcttttg gctcggtttg tgagagtccg tccggctttg
      841 ccgcctgatg tgcggaagcg ctccgcgctt ccgttgagac ttgtcggacg ttcgggctct
      901 gccccccaat tgggcgtagc ccaaaccaaa cttgagcttg acggaaggcc acaggccttc
      961 cgcacatcag gcggcagagc cggagggcta agaatcatga tgcgttcaaa gttagcaatt
     1021 gcgctcggtt tactaaccgc aagtgcggcg gcaatcgagg tgagccgcca aagtcaccac
     1081 tctgcgtcag cccaatcgca aaccaaaccg gccccgcgcg cttcaagtca gcacgctgtg
     1141 cgcaaaaacc gagcgcgtga tttttgcttg cgtgctgcgc cggccggcga agatcgtttc
     1201 ggtgtgcgct tcgaaagacc tgacgcgaga cacgggttat gtgcagtaca gatttggctc
     1261 gcccgcaaag atcgaactcg agtttccgaa agaccgcacc ggcacccagc agaagtttga
     1321 atacacgcac tacatgcgcg ccctggtcga tctcaatgaa attaacttct cggtggacgg
     1381 cgtggattat tcggtcgtgg acgattacaa cgcggaagag aaaccggccc agagcattga
     1441 aggcataacc atcaactggc cgggcacgag caagaaagaa gttcgctaca gttgccgcac
     1501 aaaacctaag actgactaca cggatttgca ggccgtgctt gagcacaact gatctctgcg
     1561 actattgccg actgaaccgg ctggttttgc aggagaaaca agcgtcgaca aaccggatgc
     1621 atcaggttac gcagtcgcga aagctgccgc tcgcgaataa tctcaaagcc ggcagactca
     1681 aaaacgttta gccaatccaa ttcacttcgg aaggtgcaag cgccggcgcg tttgcgccat
     1741 ttcagatcgt gcgtccagca gataaagcgg tcccaggccg tcgccggaat gtcttcgtag
     1801 ataattgcga cgccgcccgg ccgcagcacg cgcttcattt ccgccaacat ccggtggaca
     1861 tcttgcgcgt gaagcagcac gtacgcgaac acaaccgcgt caaaggaaga gtctggcgcc
     1921 ggaaactcgc ggccgttgta ctgccgataa tcaatgggcg cttccgttga atcagcgacg
     1981 tcgattcctc tcaccgctct gcccagcatc gccgaaagat gatgcgcgat gtagccgttg
     2041 ccgcaaccga cgtcgagcac ttccgatcca cgcggaatca cacgcgcgat ctccaaagcc
     2101 atgtcgtagg cgcggccgac ctttcgccgc cggcgttcgc gcagccaacg gcgcttcacg
     2161 ccattaccgg cagttgttag gggaccgacg gcaagatcga aaacggtttt tggtcgagtg
     2221 actaaacgcc cgacggagta gggagtcgaa gattgcgaga gtcttagctg cggcaacatc
     2281 tcgccgaagg ctcagcaacc gcaatgccga tcacaaaccg ttcagttttt cggcggattc
     2341 gtgaatgaag aattatccgg cgcgaggatt tccggacttt tgcctgcaag agatcgccga
     2401 caggagtatg ggtcggtacg catgcctccg gcatgctggc acgccggagg cgtgcgtacc
     2461 ctaccccttc gtcaactcat ccgcgatgtg gttcgcgtcg aaaagcttcc tgagaatttc
     2521 ctgcattgcg cggacatcga cggaaatcgc ccggttaacg gtctcgtcat aatggaagtc
     2581 gccaatcagc gattggatgt tgccgtcgaa aatcaggccg acgatttcgc cattcttatt
     2641 gattgtcggc gaacccgaat tgccgccgat gatgtcgtcg gtcgaaacga aattgaacgg
     2701 cgtcgtgaga ttcacggccg acttcttttc cgtccaacgc ggtggcaggt tgtaagggaa
     2761 cttctggttg aacttcgcag agcgatcgta caaaccgccc agcgtcgtaa acggcgcaat
     2821 gcgcttac
//
LOCUS       DATDBY010000405         2791 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2871262, whole genome shotgun sequence.
ACCESSION   DATDBY010000405 DATDBY010000000
VERSION     DATDBY010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2791
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2871262"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..897
                     /locus_tag="VIT19_07655"
     CDS             121..897
                     /locus_tag="VIT19_07655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838895.1"
                     /translation="MNCNYHPKNPAMGQCSNCSRPLCPACDHRIRGFAVCQDCIVAGV
                     DALRYRQSQPTNQQVIRRKTSPFIATFLSLFVPGLGAAYNGQTSKAIVHFAIFASFFQ
                     MAVVTDGVAFFALGVFGTWLFAAVDACRTAQLMRAGLAPDAEEDAITRQLYGNPLAWG
                     ITLLVLGGIFLAHTVLGFQFPMRRALPVALVVLGAYILYDYMKRHRRREEMRLFDTTN
                     PPPSVVVNSQFAHAAYDGGDFPTHVQSPRQIGSARLQPRQ"
     gene            910..1128
                     /locus_tag="VIT19_07660"
     CDS             910..1128
                     /locus_tag="VIT19_07660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838896.1"
                     /translation="MITGIIAALTRGGAIIGAILLVVALLKQLVLAVGVLVAIIKLAI
                     IVIFVAVIVLIAVAIYRDRKKYKVTPNI"
     gene            1458..2315
                     /locus_tag="VIT19_07665"
     CDS             1458..2315
                     /locus_tag="VIT19_07665"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEY5838897.1"
                     /translation="MTRDDRFYAFIIARTSRSRAHIRRISVHKRWLKVSVLGLAVVGA
                     ALMYGFYGLIQQAEHLRIEHDNARLRAQNEKQKQELLRLNNRVNAVEDTSRKLEELSG
                     ISPAEQTAPRGQGGPARPIDSEAALAELESKTARLERRMWVYQEMMRAGGMIPSLWPV
                     DGTLEGGFGGRRNPFGGRGFEYHEGQDIDAEHGDPVLAAGSGRVTIAGRQRGYGNVIY
                     VDHGAGLSTRYGHLSQIHVAVGQTVTRGQKIGLVGSTGRSTGPHLHYEVRVNNQPVDP
                     KRYLPGAGQ"
     gene            2452..>2791
                     /locus_tag="VIT19_07670"
     CDS             2452..>2791
                     /locus_tag="VIT19_07670"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070009 - serine-type aminopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HEY5838898.1"
                     /translation="MIAKYPRALALVLSSLLLVSFIPVSVLGDEGMFLPDTLSQLPLA
                     KLKQRGLKIPITDIYNPAGPSIKDAVVRVGFGSGYGTGEFVSAEGLVLTNHHVAFDGL
                     VSASDNAKDYG"
BASE COUNT          570 a          816 c          784 g          621 t
ORIGIN      
        1 agcgcgacgc cgcgcccgga aagctcggaa gggaaaaccg gcaacagcga ctcgaaaaac
       61 cgctgaacgt tcgcgcgcga ttcaacgtac atctgacacc gcgacagcgt gaagtaaccg
      121 atgaattgta attatcaccc aaagaatccc gccatggggc agtgcagcaa ctgttcgcgg
      181 ccattatgcc ctgcgtgcga ccatcgcatt cgcgggttcg ctgtttgtca ggattgcatc
      241 gtcgcaggcg ttgacgccct gcgttatcgc caatcacaac cgacgaatca gcaggtgatc
      301 cgtcgcaaga cttctccgtt catcgccacg tttctttcgc ttttcgtccc cggcctgggt
      361 gcggcttaca acggtcaaac ttcaaaggcc atcgttcatt tcgcaatttt cgccagcttt
      421 ttccagatgg cggtagtgac cgacggcgtg gctttctttg cgctcggggt gttcggcacc
      481 tggctttttg cagccgttga tgcctgccgg acggcacagt tgatgcgcgc cgggctggcg
      541 cctgatgctg aagaagacgc catcacacgc cagttgtatg gcaatccttt ggcctggggc
      601 atcacgttgt tggtgctggg cgggatcttt ctcgcgcaca ccgtgcttgg atttcagttt
      661 ccgatgcggc gagcgctgcc cgtcgcctta gttgttctgg gcgcttacat tttgtacgac
      721 tacatgaaac gacatcggcg tcgagaggaa atgcggctgt tcgataccac caacccaccg
      781 ccgtcggtgg tcgttaacag ccaattcgca cacgcggctt acgatggcgg cgactttcca
      841 actcacgtcc agtcgccgcg gcaaattggt tccgcgcgac ttcaaccgcg tcagtaaggt
      901 tcgaccgaaa tgatcaccgg aattattgca gcattgaccc gcggcggcgc catcatcggc
      961 gccatcctgc ttgtcgttgc gctgttgaag cagttggtct tagccgtggg ggtgctggtg
     1021 gccatcatca agctggcgat catagtcatc ttcgtggcgg ttatagttct aatcgcggtg
     1081 gcgatttacc gcgatcggaa gaaatataag gtcacgccta acatctagtt cgctttcggt
     1141 gcacccgccg atcatcccgt ccgaaaaccc ttctctctgc gtttgacctg cctatcctcg
     1201 tgtgttaggg tctgacgctc aggcagcatc caggatccgt tagcccgagt ctaaaagcca
     1261 cgtttactcg gcgactcagg cgcgcaatcg gctgccgttt cagcaagcag ggttcgatct
     1321 tcggcagggt tcttaatttt aaggcctcgc acaatttagg ttaggttttc agtcgccctc
     1381 ggcgtctgtt acttcaccgg tcggcaagcg gccccgtttt acaaaacgcg cttggcgccc
     1441 gataggagca gatttgaatg actagagacg accgtttcta cgcttttatc atcgcccgta
     1501 cttccagatc tcgcgctcat atccgtcgca taagcgttca caaacgctgg ttaaaagtct
     1561 cagtgctggg gctggccgtc gtcggcgccg ccttgatgta cggcttttac ggcctgattc
     1621 agcaggctga gcatctacgg attgaacacg acaacgcgcg tcttcgcgcc cagaacgaaa
     1681 agcagaagca agaactgctc aggctcaata accgagtcaa cgcggttgag gacacttcgc
     1741 gcaagctcga ggagctgtcg ggaatttcac cagccgagca gacggcgccc cgtggtcagg
     1801 gcggtcccgc gcgccccatc gatagcgaag ccgcactcgc cgaacttgaa tcgaagacgg
     1861 cgcgccttga acgtcgcatg tgggtttacc aggagatgat gcgcgccggc ggaatgattc
     1921 cgtcactttg gcccgtggac ggaacgctgg aaggcggctt tggtggccgt cgcaatccgt
     1981 ttgggggacg cggcttcgag tatcacgaag gccaggacat cgacgctgaa catggcgacc
     2041 cggtgctggc ggccggcagc ggccgcgtaa ctatcgcggg acgccagcgc ggctatggca
     2101 acgttattta cgtcgatcac ggcgcaggcc tatcaacgcg ctacggccac ttgtcgcaaa
     2161 tccacgttgc agtcggccaa accgtcactc ggggccagaa gatcggcttg gttggatcaa
     2221 caggtcgctc aaccggaccg cacctgcact acgaagtcag agtcaacaat cagcccgtgg
     2281 atccaaaacg gtatctaccc ggcgctgggc aataacatcg gggcggtagc ccgaccgtaa
     2341 ggagggcgtt gactacgccc tcctttacgg tcgggctact gcctttcaat tcagattctg
     2401 ctaatatccc tccacacccg gaccgtcatc aatcacgaag gaaaattgta aatgatcgct
     2461 aaatacccgc gcgcgctcgc gcttgtgctc tcttctttac tgcttgtcag ctttattccc
     2521 gtctcagttc tgggcgacga aggaatgttc ctgccggaca ctttgagtca gcttccgctg
     2581 gcgaaactca aacagcgcgg actcaaaatt ccgatcaccg atatctacaa cccggcggga
     2641 ccgagcatta aggatgccgt cgtcagagta ggtttcgggt caggctacgg cacgggcgag
     2701 ttcgtgtcgg ctgaaggact ggtattgacc aatcaccacg ttgctttcga cgggttggtg
     2761 tcggcttcag acaacgcaaa agactacggc a
//
LOCUS       DATDBY010000406         2511 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2901755, whole genome shotgun sequence.
ACCESSION   DATDBY010000406 DATDBY010000000
VERSION     DATDBY010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2901755"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..563)
                     /locus_tag="VIT19_07675"
     CDS             complement(<1..563)
                     /locus_tag="VIT19_07675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838899.1"
                     /translation="MKRIGGQRPPLNKLVRKALSPTGNVGDAIFRLLMFAVAALVLVI
                     VVGMILALASHSTLSIRQFGLGFLTGRDWNPPQEVFGALPFIYGTLASSMIALVISVP
                     LSLGVAIFLVEQAPPMLARPVTFLVELLAAIPSVVYGLWGIFVLAPFLRVYVEPPLAR
                     WFGSLPLFRGPITGIGLLTGGVILAIM"
     gene            complement(662..1732)
                     /gene="pstS"
                     /locus_tag="VIT19_07680"
     CDS             complement(662..1732)
                     /gene="pstS"
                     /locus_tag="VIT19_07680"
                     /inference="COORDINATES: protein motif:HMM:TIGR00975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HEY5838900.1"
                     /translation="MLLSGQLRRGLVFVLLTAVALTGVACNGGGGGGDLKLQGAGATF
                     PMPLYQKWISEYGKLHANVKIDYQSIGSGGGIKQLQAQTVDFGASDAPMIEEEMKGAA
                     GPVVHIPTVLGAVVLTYNLAEATKPLRFSPDVIADIFLGKITKWNDARIKADNADVNL
                     PATDISTVHRSDGSGTSFVFTDYLSKVSPEWKDKVGANKSPKWIGGIGAKGNEGVTGQ
                     VKQTPNTIGYVELAYAVQNKLPVALIKNKAGNFVEPSIDAVTSAAAGTVAQTPEDLRV
                     SITDAEGATAYPISSYTYILVYQEQKDATKGKVLVDFLWWGVHDGENFAKDLLYAPLP
                     AEIVKRVEVKINSITAGGKPLR"
     gene            1895..>2511
                     /locus_tag="VIT19_07685"
     CDS             1895..>2511
                     /locus_tag="VIT19_07685"
                     /inference="COORDINATES: protein motif:HMM:NF013982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HEY5838901.1"
                     /translation="MGILNLLPKEEQYFDLFKQMTLYIVDAARELKQMLADKQPSYKE
                     YSQRIKRLEHACDELTHTISTKLNKSFITPFDREDIYLMSTALDDIVDLIDDAARAII
                     IFDVTEIRDYAHDFANVLEKMTEQLREIVATLQKPKNITQRLVEIHRLENDGDDIYHA
                     AIAELFHDEKDPLTVLKWKEIYEKMEAAIDRCENVANIIESVIIK"
BASE COUNT          591 a          723 c          689 g          508 t
ORIGIN      
        1 atcatgatcg caagaatgac tccgccagtc agcaatccaa ttccggtaat cggtccgcga
       61 aacagcggca gcgatccaaa ccagcgtgcg aggggcggct cgacgtaaac gcgcagaaac
      121 ggggccagca cgaagatccc ccaaagcccg tacaccactg aagggatggc cgcgagcagt
      181 tcaacgagaa acgtcacggg ccgggccagc atcggcggcg cttgctccac caaaaagatc
      241 gccacgccca gcgacaaggg cacgctaatc acgagcgcga tcatagatga cgccagcgtt
      301 ccatagatga acggcagtgc gccgaatact tcctggggag gattccaatc gcggccggtt
      361 aagaacccaa gcccaaattg ccggattgaa agcgtggagt gtgacgcgag cgccaggatc
      421 atcccgacga caattaccag caccagcgcg gccacggcga acatgagcag ccgaaaaata
      481 gcgtcgccga cgttgccggt cggcgacagt gctttgcgca ccaacttgtt tagaggcggg
      541 cgttgcccgc cgatgcgttt catattgtct gacggcggga aacccgcctc taaacgtagg
      601 acatataggt cccatacgac ctatgagacc catacgtccc ataaacgatt cagagtctga
      661 tctaacggag cggctttcct cccgcggtga ttgaattgat cttcacctcg acgcgtttca
      721 ctatctcagc gggcaaaggt gcgtaaagca ggtccttcgc aaagttctcg ccgtcgtgaa
      781 ctccccacca cagaaaatcg accagaactt ttcccttggt cgcatccttc tgttcctggt
      841 aaaccaggat gtaggtgtag ctggaaatcg gataggcggt cgccccttca gcgtcggtga
      901 ttgagacccg caggtcttcg ggcgtctgcg cgactgtgcc tgcggcggct gacgtgacag
      961 catcgatgct gggttcgacg aagttgccgg ccttgttttt aatcagggcc accggcaact
     1021 tgttctgcac cgcataggcc aactctacgt agccaatcgt gttcggcgtc tgcttgacct
     1081 ggccggtcac gccttcgttg cccttcgcgc cgatgccgcc gatccatttt ggagatttgt
     1141 ttgcgccgac tttgtctttc cactccgggc tgactttcga aagataatct gtgaagacga
     1201 aggaagtgcc gctgccgtcc gaccgatgca cggtggaaat gtcagtcgcc ggcagattca
     1261 catcggcgtt gtcggccttg atccgggcgt cgttccattt ggtaatcttg ccgagaaaaa
     1321 tgtcagcaat gacgtcgggc gagaaccgca gcggcttggt ggcctctgcc aggttgtacg
     1381 tcaacaccac tgcgcccagc acggtgggaa tgtgaacgac ggggccggcc gcgcccttca
     1441 tttcttcctc gatcatcggg gcatccgacg cgccaaaatc aactgtctgc gcctgaagct
     1501 gcttgatacc gccgcccgat ccgatcgatt gataatcgat cttcacgttc gcgtgcagtt
     1561 tgccgtattc gctaatccat ttttggtaga gcggcatcgg aaaagttgcg cccgcgcctt
     1621 gcagcttgag gtcgcccccg ccgcctccgc cgttgcaagc gacaccagtc aacgccaccg
     1681 ctgtgagtag tacgaacacc agaccgcgcc gtaattggcc agagagaagc atggacgacc
     1741 tcctgcgatt cgagtaggaa gggtcgattt tggcgagtgg gtgttacatc cggcttaact
     1801 ggacgtgaat tcgaggtgaa caatcgggct tggacaatgc ggaaagcctt cgctatagtc
     1861 cgaatttcga atccacacac gagggtcaaa ctggatggga atcctaaacc tccttccgaa
     1921 agaagagcag tatttcgacc tcttcaagca gatgacgctg tacatcgtcg atgcggcgcg
     1981 cgagctcaag cagatgctgg cggacaagca gcccagctac aaggaatatt cacagcgcat
     2041 caagcggctc gaacacgcct gcgacgagct gacgcacacc atctcaacca agctgaacaa
     2101 gtctttcatt accccattcg atcgcgaaga catttacctg atgtctaccg cgctggacga
     2161 tatcgttgac ctgatcgacg acgccgcgcg cgcgatcatc attttcgatg tcacggaaat
     2221 ccgggattac gcgcacgact ttgccaacgt gctggagaaa atgaccgaac agcttcgcga
     2281 gatcgtcgcg acgctgcaaa agccaaagaa catcacgcag cgtttggtag agatccaccg
     2341 gctcgagaat gacggcgacg atatttatca cgccgccatc gctgagctgt ttcacgacga
     2401 aaaggatccg ctaacggttt tgaagtggaa agagatttac gaaaagatgg aagccgccat
     2461 cgatcgttgt gagaacgtcg ccaacattat cgaaagcgta attatcaagc a
//
LOCUS       DATDBY010000407         5143 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1080420, whole genome shotgun sequence.
ACCESSION   DATDBY010000407 DATDBY010000000
VERSION     DATDBY010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5143
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1080420"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3664)
                     /locus_tag="VIT19_07690"
     CDS             complement(<1..3664)
                     /locus_tag="VIT19_07690"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY5838902.1"
                     /translation="MTNTGIGKILIVDDEVELKNTLVEALASQGYETSGFTSGEDALA
                     AFRTEAFDVILTDLMMPGMDGIALVGEALKIDPHVIALVMTGQGTIQTAVDAMKVGAF
                     DYVLKPFRLQTVMPVLTRAMNTRHIRLENLQLRETVAIYELSQTIAFTLDRQTIVSKL
                     ADAALQQTDADEVSILFPTEEGDELYVAAVRGENRQKLLGERVPLHESISSWVVHERT
                     PLILDGEVNDERFRALWPRPEIRSAISIPMQVANKLIGTININALDRARPFTLGQVKA
                     LTILASTAAAALESASLYGQVQRAEENYRSIFENAVEGIFQSTPEGRFITVNPAMARI
                     LGYDSAEEMIETITDIPQQLYVSLADGAAATRLQKESGKIIGFEFQAPRKDGQTIWLS
                     LNRHSVYDANGRELYHEGSIEDITERKEGEERIRQSERQMAEAQHLAHVGSWNWDLTN
                     NVLTWSDEHYHILGLNPKEFDPQFESVIEERVVPEDRDLVRSIVEGILKTHEPFSFHY
                     RVTRPDGQVRVVHSQGSLLCDEQNKPTRMFGTAQDVTERQRAEEERERLASEIEKQRQ
                     RLDNLVATVPGVVWEAWGQPDGATQRINFVSDFVETMLGYTVDEWLSTPNFWLTIVHP
                     DDREHAGKESADAFARGQSATMEFRWMTKDGNAVWVESNFVVIKDDEGRALGLRGVNT
                     DISERKGAEAVEARRAVHTLFRADVSAALAGSKSPLHDTLKLCAQAMVRHLNAAFARV
                     WTFNAEESVLELQASAGLYTHTNGTHARVPLGSFKIGRIAEQRLPHISNDVPNDPEVS
                     DKDWAKREGMVAFAGYPLIVEDRLLGVMALFSREALEDDTIDALASIADIVSQGIERQ
                     RAEAALRESEGRYRELFESNPYPMWVFDLATLRFLAVNDAAVSHYGYSRDEFLRLTIA
                     DIRPSEDVPQLMKDLANEPAGGITESRHCKKDGTAIDIEISSQRLIFAKRKAQLVLAL
                     DVTVRKKAEAALQESEERYRDLVENAHDIIYSHDLEGNYTSVNKAGEVITGYTREEAL
                     KLNLADTVAPEWRDKAKDMMGRKLAGERVTAYEMELIAKDGRRITVEANTKLVFQEGV
                     PVGVQGIARDVSDRKQLEAQLRQSQKMEAIGQLAGGVAHDFNNLLTAIIGYSGLALQR
                     IEDESPLKPYIEEIKKAGDRAANLTRQLLAFGRKQILQPLPLNLNDVITDLNKMLRRL
                     IGEDIRLSARLDLDLKK"
     gene            complement(3661..>5143)
                     /locus_tag="VIT19_07695"
     CDS             complement(3661..>5143)
                     /locus_tag="VIT19_07695"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY5838903.1"
                     /translation="DRAGEILWINPAFTQTTGYSFAEVAGKNPRVLKSGKQDQGFYRD
                     MWETILAGNVWHNTVINRRKDGTLNREDLTITPIRDDAGTITHFVGIKQDVTDKTRAL
                     EAMLASELRYRRLFESAKDGILILEADSGQIIDINPFLTEMLGYVKEDLMGKELWEIG
                     IFKDIAESKAAFLELQRQGYIRYDDLPLETKKGGTKQVEFVSNTYRVNGSPVIQCNIR
                     DITERKLAERTLKKANEHLEDAVTELRTKGVELASMTQQLWQASKLATMGELSASIAH
                     ELNNPLATVALRTESLLMRLPEDSEQRKPLEIITQEVDRMAVLVNNLLQFSRRSHRQI
                     STLDPREEITNSLELVHYHLRARNIEVLREFAGELPTIQADSQQLRQLFLNLLTNACD
                     AMPEGGELTVRAALDASSATAVALEFADSGKGIAAENLERIWDPFFTTKPEGKGTGLG
                     LAICRRIVEEHGGTIEIKSQLGRGTTVKMVFPATNTDVRSIGQ"
BASE COUNT         1013 a         1504 c         1379 g         1247 t
ORIGIN      
        1 tctttttcaa atcaagatca agccgggccg atagccgaat gtcctcgcca atcagccgcc
       61 gcagcatctt gttcaagtct gtgatgacat cgttcaggtt caacggcagc ggttgaagaa
      121 tttgcttgcg gccaaacgcc aataattgcc gcgtcaggtt cgccgcgcga tctcccgctt
      181 tcttaatttc ctctatgtag ggtttgagcg ggctttcgtc ttcaattcgt tgcagggcaa
      241 ggccgctgta accaatgatc gcggtgagca ggttattgaa gtcatgcgcc acgccgccgg
      301 ccaattgacc gattgcctcc atcttctgtg actggcgaag ctgggcctcg agctgcttgc
      361 gatcgctaac gtcacgagca attccctgaa cgccaaccgg cacgccctcc tgaaagacga
      421 gcttcgtgtt ggcttcgacg gtgatgcgcc ggccatcctt cgcgatcaat tccatctcat
      481 aagcagtgac tcgttcgccc gcgagtttcc ggcccatcat gtctttcgcc ttatcacgcc
      541 attcaggcgc aaccgtatcg gccagattaa gtttgagggc ctcttcgcgg gtgtatccgg
      601 tgataacctc tcccgcttta ttgacggaag tgtagttacc ctccagatcg tgtgaataaa
      661 taatgtcgtg agcgttctcg actaagtcgc ggtatcgttc ttcactttcc tgcagcgcgg
      721 cttccgcttt tttccggacg gtaacgtcga gcgccagcac tagttgcgcc ttgcgtttag
      781 cgaatatgag tctctgcgag ctgatctcaa tatcgatggc ggtgccgtcc tttttgcaat
      841 gccgagactc agtgataccg cccgcgggtt cgttggccag gtctttcatc aattgcggaa
      901 cgtcctcgga gggacgaatg tcggcgatcg tcagtctcag gaattcgtcg cgtgagtaac
      961 cgtaatgaga aacagccgca tcgttgaccg cgagaaaacg cagtgtcgcc aaatcaaaga
     1021 cccacatcgg gtaggggttc gattcaaaga gttcccgata acgtccttcg ctctcgcgca
     1081 gggccgcttc ggcgcgctgg cgctcaattc cctgcgaaac aatgtcggcg atcgaggcaa
     1141 gcgcgtcgat tgtgtcgtcc tccagcgcct cgcgcgagaa caaggccatc accccaagca
     1201 ggcgatcttc aacgatcagt ggatagccgg cgaacgccac catgccctca cgtttggccc
     1261 aatccttgtc gctgacttcc ggatcgttgg gaacgtcgtt tgagatgtgg ggaagtcgtt
     1321 gctcggcgat gcgtccgatc ttgaaacttc cgaggggcac gcgcgcgtga gtgccgttgg
     1381 tgtgggtgta gaggccggcg ctggcctgca gctcgagcac actctcttca gcattaaagg
     1441 tccaaacacg cgcgaaggct gcgtttaggt gacgcaccat ggcttgagcg cataacttga
     1501 gcgtgtcgtg caacggcgat ttactgcccg ccagcgcggc gcttacgtcg gcccggaaca
     1561 aggtatgaac cgcccggcgc gcctcgaccg cttcggcccc ttttcgttcg ctgatatccg
     1621 tattaacacc ccgcagtccc agggcccggc cttcatcgtc tttgatgacc acaaaattcg
     1681 actcgaccca aaccgcgttg ccgtctttcg tcatccagcg aaattccatc gtggcactct
     1741 gtccccgtgc aaaggcatcc gcagactctt tgccggcgtg ctctctgtcg tcgggatgga
     1801 cgattgtcag ccagaagttc ggcgtggata accattcgtc aaccgtgtac ccgagcatcg
     1861 tctcaacgaa atcactgaca aaattaatcc gctgcgtagc gccgtccggc tggccccaag
     1921 cttcccagac gactccgggc acggtcgcca ctaggttatc taaacgttga cgttgttttt
     1981 cgatttcaga tgccagtcgc tcccgctcct cttctgcgcg ctggcgctcg gttacatcct
     2041 gagcagtgcc aaacattctg gtcggcttgt tttgctcatc acacaaaagg ctcccttgag
     2101 agtgaactac tcgtacctgg ccgtccgggc gcgtcacccg atagtgaaag ctgaacggtt
     2161 catgagtctt gaggatgccc tccacaatac ttctcactaa atcacgatcc tctggaacga
     2221 cacgctcctc gatcaccgat tcgaattgag ggtcgaattc tttcgggttg agccccagaa
     2281 tgtgatagtg ctcgtcagac catgtcagga cattgttggt gaggtcccag ttccaactgc
     2341 cgacatgggc cagatgttga gcttcggcca tctgtctctc gctttgtctg attctctcct
     2401 ccccctcttt gcgctccgtg atgtcttcaa tgctgccttc gtgataaagc tcgcggccat
     2461 ttgcgtcgta aacagagtgc cgattaagtg acaaccaaat cgtctgcccg tccttccgag
     2521 gggcctggaa ctcaaaacca attatcttcc cgctctcttt ctgtaaccgg gttgcggcgg
     2581 ccccgtcggc gagactgacg tagagctgct gcggaatgtc cgtgatcgtc tcgatcattt
     2641 cttcagccga gtcgtaaccg aggatgcgcg ccattgcggg attgacggtg atgaagcggc
     2701 cttccggagt cgattggaaa attccttcca ctgcattttc aaagatcgaa cgatagttct
     2761 cttcggcgcg ctgtacctgt ccgtaaagtg aagcgctctc gagcgcggct gccgccgtac
     2821 tagccaaaat cgtgagcgct ttcacctggc ccagggtgaa cgggcgcgcg cgatcgagcg
     2881 cgttgatgtt gattgtcccg atcagcttgt tggcaacttg catcgggatc gaaatcgccg
     2941 agcgaatttc cgggcgcggc cataacgctc gaaagcgctc atcgttgacc tcgccgtcca
     3001 gaatcagcgg ggtgcgctcg tgcacgaccc agcttgagat gctctcgtga agtggtaccc
     3061 gctcgcccaa taacttttgc cggttctcgc cgcgcacggc cgccacgtaa agctcgtctc
     3121 cttcttccgt cggaaacaag attgaaactt cgtccgcatc cgtctgttgc agggcggcgt
     3181 cagccaattt gctgacgatt gtttggcgat cgagtgtgaa agcgatggtc tgactcagtt
     3241 catagatcgc gactgtctcg cgcaactgca gattttccag ccggatgtgt cgagtgttca
     3301 tggcccgtgt gaggacgggc atcacggtct gcaatcgaaa cggcttcagg acatagtcga
     3361 aagccccgac tttcatggca tcgaccgcag tctgaatcgt gccctgaccg gtcatcacca
     3421 gggcaatcac atgcgggtca attttcaaag cttcgccaac cagcgcgatt ccgtccatgc
     3481 caggcatcat caggtcggta aggatgacgt cgaaagcctc ggtgcggaaa gccgccaggg
     3541 catcttcacc ggacgtaaag cccgaggttt cataaccctg tgaagccagt gcttccacca
     3601 gggtgttctt cagctcgact tcatcgtcga ctatcaggat tttgccgatg ccggtgttag
     3661 tcattggcct attgaacgaa cgtcagtgtt ggttgcagga aaaaccatct tcacggtcgt
     3721 accgcgtccc aactggcttt taatctcaat cgtcccaccg tgttcctcga caatccgacg
     3781 gcagatcgcc agccccaggc cggtgccctt cccctctggc ttggtggtaa aaaacggatc
     3841 ccaaatcctt tcgaggttct cagcggcaat gcccttgccg ctgtccgcaa attcaagtgc
     3901 cactgcggtg gcactcgacg cgtcgagcgc cgcgcgcacc gtcagctctc ctccttcggg
     3961 catcgcgtcg caggcgttgg ttaagagatt aagaaagagc tgccgcaatt gttggctgtc
     4021 ggcttggatg gtaggaagct cgccggcgaa ttcccgcagt acttcaatat tccgggcccg
     4081 taaatgatag tgcaccagct cgagggagtt cgtgatctct tcgcgcggat ccagggtcga
     4141 tatctgacga tgactgcggc ggctgaattg aagcaggtta ttgaccagca ccgccatgcg
     4201 atctacctcc tgcgtgataa tttccagagg tttgcgttgc tcggaatctt cgggcaaccg
     4261 catcaacaaa ctctctgtgc gcagggccac cgtagccagc ggattgttca actcatgtgc
     4321 aatgctggcc gaaagctcgc ccatcgtggc gagtttcgac gcctgccaga gctgctgggt
     4381 catggatgcc aactccacac ctttcgttct taattccgtt accgcatcct cgaggtgttc
     4441 attcgccttc ttgagcgttc gttcggcaag cttgcgctca gtaatgtccc ggatgttgca
     4501 ttggataacg gggcttccat tcacccgata cgtattgctt acaaactcca cttgcttggt
     4561 accgcccttt ttggtttcga gcggcagatc gtcgtaacgt atgtaccctt gccgttgcag
     4621 ctcgagaaaa gcggctttcg actcggcgat gtctttgaag atgccaatct cccacagctc
     4681 cttgcccatc aagtcttctt tgacataacc aagcatctca gtgagaaagg ggttgatgtc
     4741 gataatctgg ccgctgtcgg cttcgagtat cagaatgccg tccttcgccg actcaaagag
     4801 acgccggtag cgaagctcgg aagccagcat cgcctccaac gcccgggtct tgtctgtgac
     4861 atcctgtttg attccgacaa agtgggtgat ggtgccggcg tcatcacgga taggcgtgat
     4921 cgtaagatct tcgcggttga gcgtgccgtc cttgcgccga ttgatcactg tgttgtgcca
     4981 gacgttaccc gccagaattg tttcccacat gtcccggtaa aaaccctgat cctgttttcc
     5041 ggatttcaat acgcgggggt tcttacccgc gacctccgca aaagagtagc cggtagtttg
     5101 agtgaaggcg ggattgatcc agaggatttc tccggcgcgg tcc
//
LOCUS       DATDBY010000408         3033 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_688524, whole genome shotgun sequence.
ACCESSION   DATDBY010000408 DATDBY010000000
VERSION     DATDBY010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3033
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_688524"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1398
                     /locus_tag="VIT19_07700"
     CDS             <1..1398
                     /locus_tag="VIT19_07700"
                     /inference="COORDINATES: protein motif:HMM:NF014307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEY5838904.1"
                     /translation="MHWQTYFIEFSYLLASILFILGLKGLSHPETAKKGMHMAEFGML
                     MAIIGTLMHFEIVSYTWIIVGLLVGSTLGAVMGVWVPMTAMPQRTALSHAFGAFAAAL
                     VGIAEYYSYTEGIKPLADLDHVKMGALGFEVMFGSLTTTGSLIAFGKLQGIIPGQPLV
                     YRGQNIFNMSLLAVMIGLFVYLIFVPTAVIPFYIMLSLSFVFGVLLVMPIGSADMPVV
                     MSLLNSYAGLAAAATGFVLGNNVLIIAGTLDGFSGFILSLLMCRAMNRSITNVLFGAF
                     GSASPATVQGEQGTMREVGLEDVAVQLAYASKVVFVPGYGLATAQAQHAVRELATVLE
                     NRGVTVKYGIHPVAGRMPGHMNVLLAEANVPYSQLYELEQINPDLASTDVAVVIGAND
                     VVNPDARDNPGSPIAGMPIIEVDRAKSVIVLKRGQGKGFSGLENPLFFKPVTGMLYGD
                     AKDTLTKLVGAVQHA"
     gene            1586..>3033
                     /locus_tag="VIT19_07705"
     CDS             1586..>3033
                     /locus_tag="VIT19_07705"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY5838905.1"
                     /translation="MRKKSLSLLVALSLFVLPFAAVAQQRAPKPKPISATVLAARGVE
                     TINAEQMRAYLSFIASDEMEGRDTPSRGLDTTAKFLALNLSRWGFKPAGDEGTFFQKI
                     ALRRDAIDGPKSSAEIDGQKFSFGEDFLPNAVQATLQGPLVFAGNGWVIKSKNLNPYE
                     GVDVKGKIIVVMGQPFPGFPKGVTRADLAGRQGVDWSSPGIYAQQQGAKGVLVIADPT
                     TLQNWEQSRARASQGGRLTVEKFTPPQTAPAVSSVLMSMNMATALLKGEKFDAAALVS
                     KFTAGEALPTFELSSGKNVKVNITVKNERPMTQNVVAVWEGSDPNLKNEYVAVGAHYD
                     HVGICAPAAADPICNGADDDGSGTTAMLAMAEALARAKQRPKRSVLFVWHAGEEKGLW
                     GSRYFAENPTVPLDRIVTQLNMDMIGRSKKDGDTNTRNQTLSGPNTVYVIGSKMMSTE
                     LGELSERVNATYLNMQLDYRYDDPADPNRFFFR"
BASE COUNT          629 a          845 c          903 g          656 t
ORIGIN      
        1 atgcactggc aaacctactt catcgaattt agctacctgc tcgcttcaat ccttttcatt
       61 ctcggattga agggcttgag ccatcccgaa acggccaaaa agggcatgca catggccgag
      121 ttcggaatgc tgatggccat catcggcacg ctcatgcact tcgagatcgt cagctatacc
      181 tggatcatcg tgggactgct ggtcggctcg acgttgggcg cggtgatggg cgtttgggtg
      241 ccgatgacgg caatgccgca acggacggcg ttgtcgcatg cgttcggcgc gttcgccgcg
      301 gcgctggtcg gcattgccga gtattacagc tacaccgagg gcatcaagcc tttagctgat
      361 ctcgatcacg tgaagatggg cgcgctcggc tttgaagtca tgttcggctc gctgacgacg
      421 accggtagtt tgatcgcgtt cggcaagttg cagggaatta ttccggggca gccgctcgtc
      481 tatcgcggcc agaacatttt caacatgagt ttgctggccg tgatgatcgg tctgttcgtc
      541 tatctgattt tcgtgcccac cgccgtaatc ccgttttaca taatgctcag tctgtcattt
      601 gtgttcggcg tcctgctcgt catgccgatc ggctcggcag atatgccggt ggtgatgtct
      661 ctgctgaact cgtatgccgg tctggcggcc gcggccacgg gctttgtgct gggcaacaac
      721 gttctcatta tcgcgggcac gctcgacggt ttctcaggct tcatcctttc gctcctgatg
      781 tgccgcgcga tgaatcgttc catcacgaat gtcttgtttg gcgcgtttgg cagcgcttcg
      841 cccgccacgg tgcagggcga gcagggcaca atgcgtgaag tgggtctcga agacgtggcg
      901 gtgcagttag cttacgcaag caaagttgtt tttgtgccgg gctatggcct ggcgacggcg
      961 caggcgcagc acgcggtccg cgaactggcc accgttctgg aaaatcgtgg cgtgaccgtc
     1021 aagtacggca ttcatccggt cgccggtcgc atgcccggcc acatgaacgt tttgctggcc
     1081 gaagccaacg tgccttactc gcagttatac gaactcgagc aaattaatcc ggacctcgcg
     1141 agtacagatg tggccgtcgt gattggcgcc aacgacgttg ttaatcccga cgcccgcgac
     1201 aaccccggta gcccgatcgc cgggatgccg atcatcgaag tcgatcgcgc gaagtctgtc
     1261 attgttctaa aacgcggcca gggcaaaggt ttctcgggcc tcgaaaatcc ccttttcttc
     1321 aaaccggtca cgggaatgct ttatggcgac gcgaaggaca cgctgacgaa gttagttggg
     1381 gcagtgcagc acgcgtaggt ggcctggctc cgccaggagc gagatgttta tcgactccga
     1441 gttaagtttt cggaactgag ctccgtcagg cgcgtgatat cgggacagct gaaattgcgc
     1501 tcctacggag cttgctgcat cataatgccg cttgggctct ataaacatct cgtccctccg
     1561 ggactcagaa acaaaacaat cgatcatgcg taaaaaatcc ctgtccctgt tagtcgccct
     1621 gagtctgttt gtcctgccgt ttgctgccgt tgcacagcag cgtgctccta aaccaaagcc
     1681 aatttccgcg acggtgctcg ccgcccgcgg ggttgagacg atcaacgccg aacagatgcg
     1741 cgcgtatctt tctttcatcg cgtcggacga gatggagggg cgcgacacgc cttcgcgcgg
     1801 gctggacacg acggcgaaat ttcttgcgct gaacctcagt cgctggggct tcaagcctgc
     1861 gggtgatgaa ggaacattct ttcaaaagat tgctctgcgc cgcgacgcga tcgacggccc
     1921 caaatcatca gccgagatcg atggccagaa attctctttc ggggaagact tcctgcccaa
     1981 cgcggtgcag gcgaccctgc aaggtccgct ggtgttcgct ggaaacgggt gggtgatcaa
     2041 atccaagaac ctaaatccct acgaaggcgt cgatgtaaag ggcaagatta ttgtggtgat
     2101 gggccagcct ttccccggct tcccgaaagg tgtgacgcgc gctgatctgg ccggccggca
     2161 aggcgtcgac tggagcagtc ccggaattta tgcgcagcaa caaggcgcga aaggcgtgct
     2221 cgtaattgcc gatcccacaa cacttcagaa ctgggaacag tcgcgtgcac gcgccagcca
     2281 gggcggacgg ctcaccgtcg agaaattcac cccgccgcag accgctcccg cagtttcaag
     2341 tgtgctgatg tcgatgaaca tggcgactgc gttgctcaaa ggtgagaagt tcgacgcggc
     2401 cgcgctggtc agcaaattca ccgccggcga agcgctgccg actttcgaat tgagctcagg
     2461 caagaacgta aaggtcaata tcacggtcaa gaatgaacga ccgatgaccc agaacgtggt
     2521 tgctgtttgg gaaggcagcg atccgaattt gaagaacgaa tacgtcgccg taggtgcgca
     2581 ctacgatcac gtcggcatct gcgcgccggc tgctgctgat ccaatttgca acggcgctga
     2641 tgatgacggt tcgggaacga ccgcaatgtt agcgatggcg gaagcgctcg cgcgggcaaa
     2701 gcagcggccg aagcgttcag tgcttttcgt atggcatgcc ggcgaggaaa aaggactgtg
     2761 gggctcgcgc tacttcgccg agaatccgac agtgccgctc gatcggatcg tgacgcagct
     2821 aaatatggac atgatcggcc gcagcaagaa agacggcgac acgaacacac gcaatcaaac
     2881 tctctcgggg ccgaacacgg tttacgtcat tggctcgaag atgatgagca ctgaactggg
     2941 cgagttgagc gagcgggtca atgcgactta cctcaacatg caactggatt atcgctacga
     3001 cgatccggcg gatccgaatc gcttcttttt ccg
//
LOCUS       DATDBY010000409         2395 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2025614, whole genome shotgun sequence.
ACCESSION   DATDBY010000409 DATDBY010000000
VERSION     DATDBY010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2395
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2025614"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..617)
                     /locus_tag="VIT19_07710"
     CDS             complement(<1..617)
                     /locus_tag="VIT19_07710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838906.1"
                     /translation="MKFIYILCLILTLAFVAQAQPADSTWLTQTERAKFEQLRISGSE
                     ALYNLDYEGARKIFKEMAVAFPNYPAGPQFLADTLLIEALYQTRRLQASLYNSDSFYS
                     KNEDKADPKLVDQFRTYTRQARQMVEARLRQNPNDTEALYFFGAIEGLKASFEETVER
                     RHLAALKDGNDAVDKHRAVIKLDPNYRDAEMTIGLYDYTVGALPLP"
     gene            complement(635..1027)
                     /locus_tag="VIT19_07715"
     CDS             complement(635..1027)
                     /locus_tag="VIT19_07715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838907.1"
                     /translation="MGKQVTALIVVFLFCLLYTVAIVAQDRTQRSLAADTASAKAEVS
                     KLGFGKRVKVKLKDGTKASGRITGFAHDHFVVTDSKGAASAIAYAEVSRVARQKEKLG
                     VFDKPWNVIMFTAAGVGAVVVIAMGVFN"
     gene            complement(1098..2300)
                     /locus_tag="VIT19_07720"
     CDS             complement(1098..2300)
                     /locus_tag="VIT19_07720"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF006050.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEY5838908.1"
                     /translation="MPLAFFGKDNANFMNVTHLECGACGLRHEARRLHNLCTQCGKPL
                     LVRYDLSQAARSLTKESLKHRAADLWRYREVLPVDAPENVITLGEGFTPLVHASRLGA
                     SLGMNELYIKDEGQNPTQSFKARGMTAAVSMAKELGVKKLAVPSAGNAAGALAAYAAS
                     AGLEAHIFMPKDTPRANVIECEQTGAHVTLMNGLITDCGAEVGRRKEAEGWFDVSTLK
                     EPYRIEGKKTMGYELAEQFEWQLPDVIMYPTGGGTGLIGMWKAFDEMEQMGWIGSKRP
                     RMVTVQAAGCAPIVRAFEEGKRFADEFPNAHTTASGLRVPKAIGDFLILDALRTSGGT
                     ALAVTDDELIAATKEIGAAEGIFCAPEGAACLPALKKLLSDGAVQPNERVVLFNTGSG
                     VKYVESFS"
BASE COUNT          493 a          747 c          623 g          532 t
ORIGIN      
        1 ggcaaaggca gcgcgcccac cgtgtaatcg taaaggccaa tcgtcatttc agcgtcgcgg
       61 taattcggat cgagtttgat caccgctcga tgcttatcaa ccgcgtcgtt gccgtctttc
      121 agcgccgcga ggtgccggcg ctcaaccgtc tcttcaaacg acgccttcaa tccttcaatc
      181 gcgccgaaga agtacagcgc ctcagtgtcg ttgggattct gcctgagccg agcttcaacc
      241 atctgccgcg cctgccgcgt ataagtgcga aactgatcga ccagcttcgg atcggccttg
      301 tcttcgttct tcgaataaaa tgaatcgctg ttgtaaagcg acgcctgcaa acgacgtgtt
      361 tgatacagcg cctcgatcag aagcgtgtcc gccaggaact gcggcccggc aggataatta
      421 gggaaagcga cggccatttc cttgaagatc ttgcgcgcgc cttcgtaatc aagattgtag
      481 agcgcctccg atcccgagat gcgaagctgc tcgaatttcg cgcgctcggt ctgtgtgagc
      541 caagtcgaat cagccggctg tgcttgcgcg acaaaggcca gcgtaagaat tagacaaaga
      601 atgtagatga atttcataga acctatcctg tttcttaatt aaagacaccc atcgcaatca
      661 caaccacggc tccgacgcct gcggcggtga acatgattac attccagggc ttgtcgaaaa
      721 ctcccagctt ctccttttgc ctcgcgaccc gggacacttc tgcgtaggcg atggctgacg
      781 cggccccttt ggaatctgtg acgacgaaat gatcgtgagc gaaaccagtg atgcggccgc
      841 ttgccttcgt gccgtccttt aacttcacct tcacgcgttt gccaaagccc aacttgctaa
      901 cttcggcctt ggctgaggca gtgtccgcgg ccaatgaacg ttgagtacga tcctgtgcga
      961 cgatcgccac cgtgtagagc aggcaaaaaa gaaatacgac gattaaagct gtcacttgtt
     1021 tccccattct ggttcgtgtc ccaggtacgc atgcctcctg acatactgca cgccagaggc
     1081 gtgcgtaccg cgcggcctta cgaaaaactc tccacgtact tcacgccgct gccggtgttg
     1141 aaaagcacca ctcgttcgtt cggttgcacc gcgccgtcag acagaagctt ctttaaggcc
     1201 ggcaagcacg ccgcaccttc gggcgcgcag aagattcctt ccgctgcgcc gatctctttc
     1261 gttgcggcaa tcagttcatc gtctgtgacg gcgagggcag ttccacccga ggtgcgcaat
     1321 gcatcaagaa tcagaaagtc gccgatcgct ttcggcacgc gcaggcctga cgcggttgta
     1381 tgcgcattcg gaaactcatc ggcaaaccgt ttcccttctt caaaggcgcg cacgatcggc
     1441 gcgcagccgg ccgcttgcac cgtcaccatt cgcggccgct ttgatccgat ccaacccatc
     1501 tgctccatct catcaaacgc tttccacatc ccgattaatc ctgtgccccc gcccgtggga
     1561 tacatgatca cgtcgggcaa ctgccattcg aactgctcgg cgagttcata ccccatcgtt
     1621 ttcttgcctt ctattcgata gggctctttc aaagtcgaaa cgtcgaacca gccttcagct
     1681 tctttccgcc tgccgacttc ggcgccgcag tcggtaatca agccattcat caaagtcacg
     1741 tgcgcgcctg tctgttcaca ttcgatgaca ttggcgcgcg gcgtgtcctt aggcatgaag
     1801 atgtgcgcct ccaacccggc gctcgcggcg tacgcggcca aagctccggc ggcgttaccc
     1861 gccgacggca ccgccagttt cttgacgcct aactctttgg ccatcgaaac cgccgccgtc
     1921 atgccacgcg ctttgaaact ctgcgttggg ttctggccct cgtccttgat gtaaagctcg
     1981 ttcatgccca gcgacgcgcc gagccgcgac gcgtgcacga gcggcgtaaa gccttcgccc
     2041 aacgtgatta cgttttcggg cgcgtcgacc ggcaaaacct cgcggtagcg ccacagatcg
     2101 gctgcccggt gtttgagact ctcctttgtc aaagaccgcg ccgcctgcga caaatcgtac
     2161 cgaactagca ggggctttcc acattgcgtg cagaggttgt gcaaccgtcg tgcctcgtgc
     2221 cgcaggccac acgcaccgca ttcaagatga gtaacgttca tgaaattcgc attgtccttt
     2281 ccgaaaaatg ccagcggcat aatagccgtt tgcaggcgtg tccgtcaggt ggagcacgga
     2341 tgctgcgcgg cggcgtgcac tttcccggcg cagcagctaa tcttgtcaaa accaa
//
LOCUS       DATDBY010000410         4769 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2259364, whole genome shotgun sequence.
ACCESSION   DATDBY010000410 DATDBY010000000
VERSION     DATDBY010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4769
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2259364"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..615
                     /locus_tag="VIT19_07725"
     CDS             <1..615
                     /locus_tag="VIT19_07725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838909.1"
                     /translation="CDDRQRGYALVSLLALMSLLALFALAVAPRVQQQTQRDWEKEAL
                     FRGSQVGEAIRLYYRSRGAQGVNALPTSMDQLLEGVQIPGRTKRLQILRPSAARDPLS
                     SDGEWRLIGPTSQDFRGFVQSLTLYSGGVPPVPRQEFSGLASLIPRMNSVLDVESAPS
                     PGGATSLDASGPFIGVASGSQRDSVISFFGIERHDEWIFTSMFR"
     gene            1165..1638
                     /locus_tag="VIT19_07730"
     CDS             1165..1638
                     /locus_tag="VIT19_07730"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEY5838910.1"
                     /translation="MITVALIEPEIPQNTGNIARLCAATNTPLHIVGVPGFRLDDRAV
                     RRAGLDYWPEVTLSRHRDLAELQSSVAPARLVFFTTKAKSSYFDWRFQSQDCLVFGSE
                     SKGLSEQILRANWSQCVTIPMLNPKVRSLNLANAVAIVVYEALKQTGAFVRAHDD"
     gene            complement(1639..1830)
                     /locus_tag="VIT19_07735"
     CDS             complement(1639..1830)
                     /locus_tag="VIT19_07735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838911.1"
                     /translation="MNFESYDSMIDSVRFSKEPIEEPRPEKEADDSSEYYYDDSTGYR
                     IYNPENEDEDLEDEREEEE"
     gene            1829..2458
                     /gene="thiE"
                     /locus_tag="VIT19_07740"
     CDS             1829..2458
                     /gene="thiE"
                     /locus_tag="VIT19_07740"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEY5838912.1"
                     /translation="MRLTLPKIYPITDRQLSGLSHAEQVQRLIDGGATLVQLREKHLP
                     PIDFFRDAEAASKVAGNSRVTLIINDRVDMAMAIDVRGVHLGQDDMPVEAARRLVQDD
                     MLIGFSTHTQQQMETAVRLPIDYVAFGPVFTTSTKQDHDPPVGLEQLRAVRNIAADLP
                     LVAIGGITAANVQAVLQAGADSVAVIASVVGERSRIEHNMRRMLELAGV"
     gene            2601..3785
                     /locus_tag="VIT19_07745"
     CDS             2601..3785
                     /locus_tag="VIT19_07745"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEY5838913.1"
                     /translation="MSFFDLPPIIERMLLVSDKISDLNFSVGQLPQVEINGKLTPVQP
                     LGLQKLTPYQTEIIAMTLLQENAEAAERLVETGTADLSYSLPSRARFRCNIFQQRGVY
                     SIVMRVIPTDIPTLSSLHLPQQLSEISELRNGLVLITGPTGSGKSSTLAAVIDVINET
                     KHYHVVAIEDPIEYLHTHKNSTINQREVGHDTKDFPSALRAALRQAPKVILIGEMRDY
                     ETTEIALEAAETGHLVLSTLHTIDASKTIDRIIGLYPKNEEPVIRTRLAQTFRYIVSQ
                     RLIPRADLRGRVAAVEILRSTPRTREYIENGEVEGKSLLEAMRDGKLEGMQDFDSVIK
                     NFIERGVVSLEDALAFATNQNNLLLALKGLTSSDDFIRSQNDTFVPEQSALTSSVISL
                     SD"
     gene            3985..4587
                     /locus_tag="VIT19_07750"
     CDS             3985..4587
                     /locus_tag="VIT19_07750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838914.1"
                     /translation="MSPFEKPPAAAPFKQSEVASDASQSVPNGFADFAKVLADLLRQN
                     DPITAKTAGPKRPAWDRRKALVCTDTPQRQAVAEGLVTLDFEIYVAENTAEALGRMRE
                     DRMDVLVLESGFDPVEQGFAFVMREIKLMRPAERRRLFFVFITPNARTMDLHAGFLNN
                     ANLVVNPADIERMPEALEFSLRHYNELYREFNRALDVAPI"
     gene            complement(4588..>4769)
                     /locus_tag="VIT19_07755"
     CDS             complement(4588..>4769)
                     /locus_tag="VIT19_07755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838915.1"
                     /translation="DLPLVLAMIPDLKNWSAADKELAARVLSAKHGRDEAGFLKQMQK
                     HALLRAFMIGLGSKL"
BASE COUNT         1059 a         1380 c         1219 g         1111 t
ORIGIN      
        1 tgtgacgatc gccaacgcgg ttacgctctt gtctcgctgc tggcgttgat gtcattgctt
       61 gcattgttcg cgctcgctgt cgctccgcgc gtgcaacaac aaacgcagcg cgactgggag
      121 aaggaggctt tgttccgcgg cagtcaggtg ggagaagcaa ttcgccttta ctatcgttcg
      181 cgcggcgcac agggcgtcaa cgcgcttccg acttcgatgg atcaattgct tgaaggcgtg
      241 cagattccag gtcgcaccaa gcgcctgcaa atcctgcgtc cgtcagctgc ccgggatccc
      301 ctttcttcag acggtgaatg gcggcttatc ggcccaactt ctcaggattt tcgaggattt
      361 gtgcagtctt tgacgctgta ctcgggcggt gttccaccag tcccacgtca ggagtttagc
      421 gggctcgcca gcctcatccc gcggatgaat agtgtgttgg atgtcgagtc agcgccctcc
      481 cccggcggtg ccacttctct tgacgcgtca ggtcctttca tcggtgttgc tagtggtagt
      541 caaagagact ccgtgatctc tttcttcggc attgagcgac atgatgaatg gatcttcaca
      601 tcaatgttcc gctgatctca attcacgtca atttatccaa acgtcatccc ggaattttct
      661 ttcttcgcgc ttcacatata ctgctacctc gcatcactcg cgagggtgat ctgcacctct
      721 tcgtagcagc tgtatgcgac gtccagtgcg cgcactcatg cagtgactgc tgcaaaataa
      781 ttttctgcgc ttgtaataaa ttgttgacaa gcatgcgaat taagtttata tagcaagatg
      841 ttgtgcgccg ttttctctag accacaagac ttacagaaac acagcatctt gtggtcacaa
      901 cctgaaaact taagaaggag aaacgacaat tatggcaact aagaagaagg ccgcgaaaaa
      961 agccggcaag aaaaaaggcg ccaagaaggc cgccaagaag agatagttcg ttcactcagg
     1021 aaacaacttc gaccacgttc aagtggcgca caccaagtga ggccctagcg gcccttagaa
     1081 aaaggaacgg cgaatgtttt aacttgccgt tcctattatt ttgcgcggac gccggtcaac
     1141 agccggagac ttggcgttga aaccatgatc acggtcgcac tcatcgagcc tgagattccc
     1201 cagaacaccg gcaacatcgc gcgtctgtgc gccgcaacga acacgcctct gcacatcgtc
     1261 ggcgtcccgg gctttcggct tgatgaccgc gcagtccgcc gcgccggctt agactattgg
     1321 cctgaagtta ccctctcgcg tcaccgcgat ctggccgagt tacaaagctc agtggcgccg
     1381 gcgcgtctcg ttttcttcac aactaaagcc aaatcgtctt attttgactg gcgttttcag
     1441 tctcaggatt gtctcgtctt tggttctgaa agtaagggat tgtcggagca aattctccgg
     1501 gcgaactgga gtcagtgcgt cacgattccg atgctgaatc caaaagtgcg aagcctcaat
     1561 ctcgcgaatg cggtggcgat tgttgtgtac gaggcgctaa aacaaacggg cgctttcgtg
     1621 cgcgcgcacg acgattgatc actcttcttc ctcacgctcg tcttccaggt cctcgtcttc
     1681 gttctcaggg ttgtaaattc ggtagccggt cgaatcgtcg tagtagtatt cagaggaatc
     1741 gtcagcttct ttctccgggc gcggttcttc aattggttct ttgctgaacc tcacagaatc
     1801 aatcatgctg tcgtaagatt cgaagttcat gcgactgacg ctaccgaaga tctatcccat
     1861 caccgatcga caactttccg gtctgagtca tgctgaacaa gtgcagcggc tcatcgatgg
     1921 tggcgcgacc cttgttcaac tgcgcgaaaa acatctgccg ccgatcgatt tctttcgcga
     1981 cgccgaagcc gcgtctaaag ttgccggcaa cagtcgcgtc acgttaatta tcaacgatcg
     2041 cgtcgacatg gcaatggcaa ttgacgttcg cggcgtccac cttggacaag acgacatgcc
     2101 agtcgaagcc gcgcgtcgtt tggttcaaga cgatatgttg attggtttct ccacccacac
     2161 tcaacaacag atggaaaccg ctgtgcgact gccaatcgac tacgtcgcgt tcggacccgt
     2221 ttttacaacc agcaccaaac aggatcacga tccgcctgtg ggacttgagc agttgcgcgc
     2281 ggtcaggaac attgcagcgg atctcccact cgtggccatc ggagggatca ccgccgctaa
     2341 cgtccaagcc gtcctccagg ccggcgccga ttctgttgcg gtcatcgcat cagttgtcgg
     2401 cgaacggtcc aggattgagc acaacatgcg aagaatgctt gagctggccg gcgtttgacc
     2461 tcaatttggc cccaaatatt ttttgcttgc gttttcgccg aggcatcagc gagaatggat
     2521 ggccgcgcaa aaagcggcca attccgatcc tccctcccat tgagccctac taaagcctca
     2581 gtcctggagc ctgtctcttc atgagtttct ttgatttacc gccaattatc gagcgtatgt
     2641 tgctggtttc agacaagatc agcgacctca atttctccgt cggccagcta ccgcaggtcg
     2701 aaataaacgg caagctgacg cctgtccaac cccttggatt gcagaaactc acgccttacc
     2761 aaactgagat tatcgcgatg actctgcttc aggaaaatgc tgaggcggct gagcggctag
     2821 tggaaacggg cacggcggat ttgagttact cgctgccttc gcgcgcgcgc tttcgttgca
     2881 atattttcca gcaacgcggc gtttactcga tcgtcatgcg cgtaattcca accgacattc
     2941 ccacgcttag ctcgttgcac ctgccgcagc aactttccga aatctcggaa ctgcgcaatg
     3001 gcctggtcct gattaccggc ccgaccggat cgggaaagag ttccaccctg gcagcggtca
     3061 tcgacgtcat taacgagacc aaacattatc acgtcgtcgc cattgaagat cccatcgagt
     3121 acctccacac tcacaagaac tcgactatta atcaacgcga agtcggtcac gacacgaaag
     3181 attttccttc cgcactgcgc gcagctttgc gccaggcgcc gaaagtgatt ctgatcggcg
     3241 aaatgcgcga ctacgaaaca actgagatcg cgctcgaagc cgctgagacc ggccacctcg
     3301 ttctctccac cttgcacacg atcgatgctt cgaaaacgat cgatcgcatc atcgggcttt
     3361 atccgaagaa tgaagagccc gtcattcgca cgcgacttgc gcagactttc cgttacatcg
     3421 tctcgcaacg tttgattccg cgcgccgacc tgcgcggtcg cgttgccgcc gtcgaaattc
     3481 tgcgttcgac accgcgtacg cgcgagtaca tcgaaaacgg cgaagtggaa ggcaagtccc
     3541 tgctcgaagc gatgcgcgac ggaaagcttg agggcatgca ggatttcgat tcggtcatta
     3601 agaacttcat tgagcgcgga gtcgtcagtc ttgaagatgc tctggcgttc gccacgaatc
     3661 agaacaacct gttgctggca ctgaaaggat tgacgtcgtc cgacgacttt attcgctctc
     3721 agaacgatac ttttgtgcct gaacagtctg cgctgacatc ctcagttatc agcctcagcg
     3781 attaaccaac ccaaaacacc gatgctcgtt atctgctcaa attgcaaaac gcgactgcaa
     3841 ctcgacgaaa gtaagattcc gtcgaacgtt tcgaaagccc gctgcccaaa gtgccagggc
     3901 actgttgaga tccgagtctc ttccgcgacg gactccgacc tccacgtttc gcttccggcc
     3961 gacatgacac caccatcccc agcagtgtca ccgttcgaga agccgcctgc cgccgcgcct
     4021 ttcaaacagt ccgaagtcgc gtccgacgcc agccaatccg taccgaacgg cttcgccgat
     4081 tttgccaagg ttctcgctga tttactgcgt cagaatgatc cgattaccgc caagaccgca
     4141 ggaccaaagc gtccggcgtg ggaccgacga aaagctctgg tttgcacgga cacaccgcaa
     4201 cggcaagctg tcgccgaagg attggtgacc ctggattttg aaatttacgt tgcggaaaac
     4261 acggctgaag cgctcgggcg catgcgtgaa gatcgaatgg atgtgctggt gctcgaatca
     4321 ggctttgatc ctgtcgaaca aggctttgcg ttcgtgatgc gcgagatcaa attgatgcgg
     4381 cccgccgaac gtcgtcgcct gtttttcgtt ttcatcaccc caaacgcacg caccatggac
     4441 ttgcatgccg gctttcttaa caacgctaac cttgtcgtga acccggcgga catcgaacgc
     4501 atgccggagg cgctcgagtt ttcgttgcgc cattacaacg aactctatcg cgagttcaac
     4561 cgcgccctcg acgtcgctcc tatctagcta gagcttcgag cctaatccga tcatgaaagc
     4621 acgcagtaat gcgtgctttt gcatttgttt gagaaagccg gcttcgtccc ggccgtgctt
     4681 cgcagagagt acgcgcgccg cgagttcctt gtccgccgca ctccagttct tgaggtcggg
     4741 aatcatcgcg agcacaagtg gcagatcgc
//
LOCUS       DATDBY010000411         5196 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2476725, whole genome shotgun sequence.
ACCESSION   DATDBY010000411 DATDBY010000000
VERSION     DATDBY010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5196
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2476725"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1198
                     /locus_tag="VIT19_07760"
     CDS             <1..1198
                     /locus_tag="VIT19_07760"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5838916.1"
                     /translation="LATLVFGTHTISLLAQSRRQPPTSDQKKNKRPPQGQETGEKEQE
                     PVPTDIAGKETETVKVSTSLVNVDAVVFNKKSGQITTGLKKGNFELYVDGVKRDITNF
                     STPEAPITITLVVEYSKLGQFMGLYGSGGQEAGQLEVIRPTAMFLSQFITPQDYVSVI
                     AYDMRPTPLTDFTNNPQRIQQVISLLLRNTPAFIETNMYDALKLTLVGGRADSVVLEE
                     AKESTTEYGGMVSVTSDRRKAVLLVASGIDTFSKINYDQVRKIVQNSGIPIYIIGTGN
                     LFSKKYGDMMDPGRGGNIMGVPIDRMTFLQADSILKTLAKETGGTYFPVTFEGELPNA
                     LSSINSLLRNQYSLGFSPGDIRDGKSHKIVVKVDVDGDGQTDEKVYVVKAREVFIAPK
                     ADTTKQ"
     gene            1442..4036
                     /locus_tag="VIT19_07765"
     CDS             1442..4036
                     /locus_tag="VIT19_07765"
                     /inference="COORDINATES: protein motif:HMM:TIGR00733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEY5838917.1"
                     /translation="MSKEVISPEEAARAQEFPDRVGFKPDNPFLANFRPYIAPETIIP
                     ELTARALIVGTLLGIVFGASSLYLVLKVGLTVSASIPVAVISISIFALLSRLKIRNAT
                     ILENNIVQTAGSAGESIAFGVGVTMPAIMILGFDLELTRVMLVAVLGGLLGILMMIPL
                     RRALIVAQHGQLKYPEGTACAEVLKAGASEESRAAASDEAKAEMASRDQAGSNIGAKT
                     IFTGFGIGVLYQAAHRAFYTWKEAPEKIFGAPFSKGSVGVEVNPALLGVGYVIGPRIA
                     SIMCAGGVLAYLVLIPAIAYFAGGETTGPIAPGTDPVRGMSPNDIRGNYILYIGAGAV
                     AAGGIISLFRSLPTIWHGLKGGLADLRGGQAASARAPRTDQDISMKYVLAGIIVLVAM
                     IMLFPQLGLQQNILVAFLGAIMIIAFGFLFVTVSSRLTGEIGSSSNPISGMTVATLLL
                     TCLIFLLLGWTGPPYYVTALTIGAIVCIAASNGGTTSQDLKTGFLVGATPKYQQYAIL
                     VGALASALILGPILIRLNDSGTIYAKRITFSKVDDRVASLPATEAGALPAYAEDLKPR
                     APGNYRVLTRDAKAPKVEGLGEGEYLVNDTGKIVYKVERNFKPELRANLAELGASETL
                     RGPQAAEDQNTYRVWQKSNTEGGREGRYLVDAQGVPQYIVDPAINGKNKMRPDGSTPE
                     KFDAPKATLMSYIIKGILNRQLPWNLVLLGVMIAIVLEMAGIPSLAFAVGVYLPLSAS
                     SPIFIGGMVRWLVDRHLRRKHANLTEEQIIAETDKSPGVLMASGYIAGAAIAGIIIAF
                     MAGYFDETSRAVKVWMLAHNPFFDEPPGHVKGYAELLSLIPFVAITALLYAVGREWIL
                     GSKKKRAD"
     gene            4057..4878
                     /locus_tag="VIT19_07770"
     CDS             4057..4878
                     /locus_tag="VIT19_07770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838918.1"
                     /translation="MIYLRRKLSLPRSLFVRLLLTTFAALALAGSPAACTAKTSSPNQ
                     VQPRTPTDVVREFYKAMREHRFQEAFALTIYKPAVEGLNAEEMEILRPGFEEKAAQIP
                     ASVEIMGEQISGKIATVFVKIPVDVSSPQVTSQPLNLTNASGSWLIGSEADAAEVKKA
                     GRRYFLDALITEHESDVEDILKRLVLWQGVYSQQHGGQYGDFPALIKAGMLGANVIDP
                     KLSGYNFRITVGKDGKSYVANAEPLTHGKTGKLSFWMDQTGLIKSIDNGGKPLKP"
BASE COUNT         1129 a         1459 c         1493 g         1115 t
ORIGIN      
        1 tctggcaacg ctcgttttcg gcactcacac gatttcgctt ttggcgcagt cacgccgcca
       61 gccgcccaca tccgatcaga aaaagaacaa gcgaccgccc cagggtcagg agacgggcga
      121 gaaagagcag gagcccgtcc cgaccgacat cgccggcaag gagaccgaga cggttaaggt
      181 cagcaccagc ctggttaatg tggacgcggt cgttttcaac aaaaagtccg gtcagattac
      241 gactggatta aagaagggca atttcgagct gtacgttgac ggggtcaaga gagacatcac
      301 gaacttctcg acacctgaag cgcccatcac catcacgctc gttgttgagt acagcaagct
      361 gggtcagttc atggggctat acggaagcgg cggccaggag gccggccaac tggaagtgat
      421 tcgtccgacc gcaatgtttc tttcgcagtt catcaccccg caggactacg tttcggttat
      481 cgcttacgat atgcgcccga ccccgctgac ggatttcacg aacaatccgc aacggattca
      541 gcaggtgatt agcctgctgc ttcgtaatac gccggcattt atcgaaacga acatgtacga
      601 tgcgctaaag ctgaccctgg tcggtggccg cgctgattcg gtcgtgctgg aagaggccaa
      661 ggaatccacc accgaatacg gcggaatggt gagcgtcacc agcgatcgtc gcaaggctgt
      721 gctgttggtc gcgtccggga tcgacacttt cagcaagatc aattacgacc aggtacggaa
      781 gatcgtccag aactccggca ttccgatcta cattatcggc accggcaatt tgttcagtaa
      841 aaagtacggc gacatgatgg atcccggccg cggcggcaac atcatgggcg tgccgatcga
      901 ccggatgact tttctgcaag ccgatagcat cctgaaaaca ttggccaaag aaactggtgg
      961 cacctacttt ccggtcacct ttgaaggcga gttgccaaac gcgctcagct cgatcaattc
     1021 cctgctgcgc aatcaataca gcctgggatt cagccctggt gacatccgag acggaaagag
     1081 ccacaagatc gtcgtcaagg ttgatgtcga tggcgacggg cagactgacg aaaaggttta
     1141 cgtcgtgaaa gctcgtgaag tgttcatcgc gccaaaggca gacacgacga agcagtaggc
     1201 ggtaggcgga aagcagtagg cagaaacaaa agcagagatc gagtaaattc gatctctgct
     1261 tttccttttg gaattcgttc agttacctcg aacgctttca ggctttctgc tcactgccaa
     1321 ctgcgcactg ctcactgcct ttaattgctt gctctgacat gttcagcgcg tgtaaagtag
     1381 cggcggacat tcccttaaca atctccccgc ttttgcaaaa ctcgttcgga ggtcagaact
     1441 gatgtcgaag gaagtcatca gccccgagga agccgcccgt gctcaggagt ttccggatcg
     1501 cgtagggttc aagccggaca atccattcct ggctaacttt cgcccgtaca tcgcgcctga
     1561 gacgattatc ccggaactga ctgctcgagc acttatcgtc gggacgttgc tcggcatagt
     1621 gttcggggcc tcgtccctgt atctggtctt gaaagtcggc ttgacggtca gcgcttcaat
     1681 tcccgtcgcc gtcatttcga tcagcatctt tgccttactt tcacggctaa aaatccgcaa
     1741 cgcgacgatc ctcgagaaca acatcgtgca gacggccggg tcggcgggcg agtcgatcgc
     1801 cttcggggtc ggcgtgacca tgccggccat catgattctc ggctttgacc tcgagctgac
     1861 gcgcgtgatg ctggtggccg tgctcggcgg tctgctggga attctcatga tgattccgct
     1921 gcggcgcgcc ctgattgtgg cgcagcacgg acagttgaaa tatccggaag gcacggcctg
     1981 cgcggaagtt ttgaaagccg gggcctcgga agaatcgcgg gcggcggcct cggacgaagc
     2041 gaaagccgag atggcgtcgc gcgaccaggc cggctcgaac atcggcgcca aaacgatctt
     2101 cactggtttt ggcatcggcg ttctttatca ggcggcgcac cgcgctttct acacctggaa
     2161 ggaagcgccc gagaagattt tcggcgcgcc tttcagtaaa ggttcggtcg gtgtcgaagt
     2221 caatccggcc ctgctcggcg tcggttacgt catcggcccg cgtatcgctt caatcatgtg
     2281 cgcgggcggc gtgctcgctt acctggtgct gattccggca attgcttact ttgctggtgg
     2341 cgaaactacc ggtccgattg cgcccggcac ggatccggtg cgcggcatga gtcccaacga
     2401 tatccgcgga aattacattc tgtacattgg cgcaggagca gtggccgcgg gcgggatcat
     2461 aagtttgttt cgttcgcttc cgactatctg gcacggcttg aaagggggcc tggctgattt
     2521 gcgaggaggc caggcagcca gcgcgcgtgc gccacgaacc gaccaggaca tctcgatgaa
     2581 gtacgtgctg gccgggatca ttgtgctggt ggcgatgatc atgttgttcc cgcaactggg
     2641 tctgcaacaa aacatcctgg tcgctttcct cggcgcgatc atgatcatag ccttcggctt
     2701 cctgtttgtg accgtgtcgt cacggctgac cggcgagatt ggatcgtcgt ccaatccgat
     2761 ctcaggcatg accgtcgcga cgttgctgct aacttgcctg atcttcctgt tgctgggttg
     2821 gaccggcccg ccgtattacg taaccgcact aaccatcggc gcgatcgttt gcatcgcggc
     2881 ctcgaatggg ggaaccactt cgcaggactt gaagactggc ttcctggttg gggccactcc
     2941 caagtatcag cagtacgcca ttctggttgg ggcgctcgcc tcagcgctca tcctggggcc
     3001 gatcttaatt cgcttaaacg acagcggaac aatctacgcg aagcgcatca ctttttcgaa
     3061 agttgatgac cgcgtggcat cacttccggc cacggaagcc ggcgcgttgc cggcttacgc
     3121 tgaagacctg aagccgcgcg cgccgggtaa ctaccgcgtg ctcacgcgcg acgccaaggc
     3181 tccaaaggtc gaaggtcttg gtgagggcga atacctcgtt aacgacaccg gcaaaatcgt
     3241 ttacaaagtc gagcgcaact tcaaacccga actgcgcgca aatctggcag agttgggtgc
     3301 ctcagaaacc ctcagaggac cgcaagccgc ggaggatcaa aacacctatc gcgtctggca
     3361 aaagtcgaac actgaaggcg gacgcgaagg tcgatatctg gtcgatgcgc agggcgtgcc
     3421 gcaatacatt gtcgatccgg ctatcaacgg caagaacaag atgagaccgg acggctcgac
     3481 gcccgaaaaa ttcgacgcgc ctaaggcgac gttgatgtct tatatcatca agggaattct
     3541 caaccgccag ttgccatgga atctcgtgct gctcggagtg atgatcgcca tcgtgctcga
     3601 gatggcgggt attccttcgc tcgcattcgc agtgggcgtg tacctgccgt tgtcggcttc
     3661 cagtccgatt ttcataggcg gaatggtgcg ttggttggtt gatcgacacc tgcgccgcaa
     3721 gcacgccaac ctgactgagg aacaaatcat cgctgagact gacaagagtc cgggcgtgtt
     3781 gatggcctca ggttacatcg cgggcgcggc gatcgcaggc atcatcatcg ccttcatggc
     3841 gggctacttc gacgaaacat cccgtgcggt taaagtttgg atgttggctc acaatccttt
     3901 cttcgacgag cctccgggcc acgtgaaggg ttacgccgaa ctgttatcgc tgatcccatt
     3961 tgtcgcgatt accgctttgc tctacgcggt gggtcgtgaa tggattctgg gaagcaagaa
     4021 gaagcgcgct gactaacagg ccgggtaagg aaacgcatga tttatcttcg tagaaagctg
     4081 agtctcccac gcagtctgtt cgttcgtctg ctcctgacga catttgcagc actcgcgctc
     4141 gcgggttcgc ccgccgcgtg tacggcaaag acttcgtcac ccaatcaggt ccagccacgc
     4201 acgcctactg atgtcgtgcg tgaattttac aaagccatgc gcgagcaccg cttccaggaa
     4261 gcattcgcgt tgacgatcta caaacctgcc gttgaaggtc tgaacgccga ggagatggag
     4321 attctgcggc ccggttttga agaaaaagcg gcccagattc ccgccagtgt tgaaatcatg
     4381 ggcgaacaga tcagcggcaa gatcgcgacg gtctttgtaa agatcccggt cgacgtttcg
     4441 tcgccgcagg taacttcgca accgctgaac cttactaacg cgagtggcag ttggctcatt
     4501 ggcagcgaag ccgatgcggc tgaagtgaag aaagccggcc gccggtattt tctcgacgcg
     4561 ctgatcactg agcacgagag tgatgtcgag gacatcctga agcgtctggt tctttggcaa
     4621 ggggtttaca gccagcagca cggcggacaa tacggtgatt ttcccgcgct gataaaggct
     4681 ggaatgctcg gcgccaacgt gatcgacccg aaactaagcg gctacaactt ccgtattacg
     4741 gtcggcaaag acggcaagag ctatgtcgcc aacgctgaac cgttgactca cggcaagacc
     4801 ggcaagctgt ccttctggat ggatcaaacc ggactgatta aaagcatcga taacggcggc
     4861 aagccactca aaccttaaga gaccaagccc attttggagt gcgacggcgt gcggggtccc
     4921 cgcgcgagca tctcgcgtgg ggtgctctcg acgccgcttt ccactgccgt tccctctccc
     4981 tttgggagag ggttctacgc acgagaaaca aaaaaatatt tccccttgtc tttagccgct
     5041 aagcgtcgct ccctcacccc agccctctcc caaagggaga gggagatcgg cgcactccaa
     5101 aatgggcttg gtctcttaag gtttgagtgg cttgccgccg ttatcgatgc ttttaatcag
     5161 tccggtttga tccatccaga aggacagctt gccggt
//
LOCUS       DATDBY010000412         4959 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1658369, whole genome shotgun sequence.
ACCESSION   DATDBY010000412 DATDBY010000000
VERSION     DATDBY010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4959
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1658369"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="VIT19_07775"
     CDS             complement(<1..269)
                     /locus_tag="VIT19_07775"
                     /inference="COORDINATES: protein motif:HMM:NF014643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEY5838919.1"
                     /translation="MKLTRDIHSLSTFKRDTAKLVRQLKKTGQPVILTVNGKAELVVQ
                     DAESYQRLLDAQDRMAAIEGIKRGLESMKRNTGKSAEKFFREFFA"
     gene            801..2225
                     /locus_tag="VIT19_07780"
     CDS             801..2225
                     /locus_tag="VIT19_07780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838920.1"
                     /translation="MSEVRLNLIDSQQILQGTIHGSIADACIAALSAEPETIGELQAA
                     LARYHKPIGDAAELGSFSSFCSTSEINTEPWDAGVVIIDLAAQIVAAESTYSQPDREG
                     EVRYHNGTQSTDVPVLYRVSGEWIFLNSIAEYESTNRQERSRPLIDARSILYGRPMLE
                     FIVTNVRQSPVCLPGIKTLRLLEQAQRPGRDTGAIDSIQNPNREVNDEEEETGRALGD
                     EISAIHARWLTTSRGDLERQAPRDVLLEKRELIDFDMHTRMLQWSDQGEGPPCLSKDS
                     YAYRFAGFGTHECLIYYDLVRLLLWSSLEHQSLDNQSELFDPHAEIKWLEEIKCEWLE
                     SPQGDFDGRIPAILIDNERKRLPITLQAKDMIVDDNCEICVMSAGEIETGYGPGFWHL
                     DGSSMDEGFAFSFCRTREEWDEENRRQEEFNLEFNRKWKEREERIARGEPVEDEFSDG
                     WSDSSDSDPLFGAPEHDDESSPIH"
     gene            complement(2238..2314)
                     /locus_tag="VIT19_07785"
     tRNA            complement(2238..2314)
                     /locus_tag="VIT19_07785"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2278..2280),aa:Ala,seq:cgc)
     gene            complement(2547..4286)
                     /locus_tag="VIT19_07790"
     CDS             complement(2547..4286)
                     /locus_tag="VIT19_07790"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5838921.1"
                     /translation="MRNHTRSLVVIIVALLAFVIAAALRSSDAQRRIGTDTYAITNAR
                     IVTGSGPVIDRGTVVFRDGLIVAVGANVAAPADARVIDGTGLTVYPGIIDANTTLAIP
                     RPSPTPGGGGGAFAGLFGQSAPSATSPNSPNLPGMQPEILASDLIRPGGPEIEAARNA
                     GITAAHTAPRGNVFLGQSALINLAGDTPQQMIVRSPVAQYIGLQPLGGGQYPGSLMGV
                     FASVRQMLLDTKRYREMNEIYERNPRGQKRPAQDKSLEALLPVVAGRMPIVMQADSER
                     EIERVLDLARDFNVRVIINGGRQADRVAARLKAANVPVLLSLNFPRRTTAASPEAEPE
                     PLRILRERVEAPKTAGRLAAAGVRFAFQSGGMASMNDYLANVGKTVENGLSRDDAIQA
                     LTIWPAQVLGVASQLGTIEVGKIANLTVTRGDLFARDRRIAHVFIDGKPIDLRPPTAP
                     GDRGANASGTWSLTVSLTGTGNEKQELTATMNLQQEGERLTGSLQGPLGSGSIATGSI
                     SGAEVNFTVPITLPAPASQTTDAMFVGTVRGNQMSGTVQVVGRGSGTFTATRAGRPEP
                     AASPSATPGQNPD"
     gene            4556..>4959
                     /locus_tag="VIT19_07795"
     CDS             4556..>4959
                     /locus_tag="VIT19_07795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838922.1"
                     /translation="MLAVRKLIIFVIAAIAVLGLSPAPSAQNATYDLVIRDGLVVDGS
                     GSPWYRADVAIKDDKIVRIAPSITEPARQTVTVKGQVVAPGFIDIHTHARRGIFEVPT
                     AENYVRQGVTTLIEGPDGGSPVPLAPFFKRLEA"
BASE COUNT         1095 a         1369 c         1411 g         1084 t
ORIGIN      
        1 tcagcaaaga attcgcggaa gaacttctcg gcagacttgc cggtatttcg tttcatgctt
       61 tccaatccgc gctttatgcc ctcgatcgct gccatcctgt cctgcgcgtc cagaagtctc
      121 tggtaacttt cagcatcctg gacgactaac tcggctttgc cattcaccgt caggattacc
      181 ggctgcccag tcttcttcaa ttgacggact agcttggcgg tgtcgcgttt gaacgtgctg
      241 agactatgaa tatcccgtgt aagtttcatc tacttgctcc gttgctaaat ctgcaccgaa
      301 tttcgcaact tgcagtgtaa catgggagcc aaatatcaag gaagattagt cctctcctgt
      361 ccggctaatt aaagtggact ttaacaaggg gcctgcgagc gtgagcttat tttagtattt
      421 cgagacgacg gaattggtag acctttggat tcgcacttag cgccaagatt cgtgcttcgg
      481 ccaggtcctg ccagaagcga taggtctcaa agtaggtctt cttgatgcat gtgccgccct
      541 tgaatttcaa gaaactggaa aaagtgggat ggtggagcag agggggatcg aaccctgacc
      601 tccgcattgc gacctctgat cgactcagga actgagtttt ctccctcatc tcgcctgaag
      661 cgcgagatgc aaagttttgt gcagggacag cggaagatca aaatcgctgt gaacggcttc
      721 tgcttacgcc ggctagcgaa tctttgcact ctccttccac ttgttcggcc cacagacatt
      781 ttggtaagag agagtctgcc atgagtgaag tgcgactcaa cctcatcgat tcacaacaga
      841 ttctccaagg gacgattcat ggctcaatag ccgacgcatg catcgcggca ttatcagccg
      901 aaccggaaac gatcggagag ctccaggctg cattagcgcg gtatcacaaa cccattgggg
      961 atgcggccga actgggatcg ttctcgtcat tttgttcaac gtcggaaatc aataccgaac
     1021 cttgggatgc aggcgtggtg atcattgatc ttgccgctca gatagttgcc gcagagtcca
     1081 cgtattctca acccgatcgc gagggagaag tgcgctacca caatggaacg caatcaaccg
     1141 acgtccctgt gttgtaccgg gtctctggtg agtggatctt tctaaattcg atcgctgaat
     1201 atgaatcgac caacaggcaa gaacgttcgc ggccactaat cgatgcgcga agtattttat
     1261 atggaaggcc catgctcgag tttatcgtta ccaatgtccg gcaatctcca gtttgtcttc
     1321 ctggcattaa gactctccgg ctcttggaac aagcgcaacg acccggacgc gacacaggtg
     1381 ctatcgactc gattcaaaat ccgaacaggg aggtcaatga cgaagaagaa gagaccggca
     1441 gagcactcgg tgacgaaata tctgcgattc atgcgcgctg gttgacgact tcgcgtggcg
     1501 acttggagcg ccaggcgccg cgggatgtct tgctggaaaa aagggaatta attgactttg
     1561 atatgcacac acgcatgttg caatggagtg atcagggcga aggtccgccg tgtttgagca
     1621 aagactctta tgcatatcgt tttgccggct tcgggacgca tgaatgcctc atctactacg
     1681 atctagtgcg gttactactt tggagcagct tagagcatca gtctctcgat aatcagagtg
     1741 agttgtttga tcctcacgct gaaatcaaat ggctcgaaga gatcaagtgc gaatggcttg
     1801 agagcccgca aggtgatttt gacggccgca tcccagcgat cttgatcgac aatgagcgca
     1861 aacgtttgcc cattacgctt caggcgaaag acatgatcgt cgacgacaat tgtgagatct
     1921 gtgtcatgtc ggcgggggaa atagaaacgg gttatggtcc gggattctgg cacctggacg
     1981 gatcgagcat ggatgagggt tttgcgttct cattctgtcg cacgcgcgaa gagtgggatg
     2041 aagagaatcg aaggcaagaa gaattcaacc ttgagttcaa tcgcaaatgg aaagaaaggg
     2101 aagagcgcat cgcgcgtggc gaaccagttg aagacgaatt tagcgatggg tggtcggatt
     2161 catccgattc cgaccccttg ttcggtgcgc cggagcacga cgacgaatca agcccaattc
     2221 attgagacgt gagtttttgg tggagcagag ggggatcgaa cccctgacct ccgcattgcg
     2281 aacgcggcgc tctgccaaac tgagctactg ccccacgaat cggagaatac agtttcgagt
     2341 tttaggattc aagtaactgt gtcagaaccg agagcggtag cgaccggatc aacactcaag
     2401 ctgaatggct gatcccatca ctaccgctcc gggtactgac acgagccccg tcgctaccgc
     2461 tctgggtact gacacgcctt gctcggagat ataacccgcc cgctaacgca ggcggtactg
     2521 acaacgcggc ccgcccgcta tcccgactag tcgggattct gacctggtgt tgcgctcggt
     2581 gatgcagcag gctcgggtct gccggcgcgt gttgccgtga atgttcctga gccgcggccg
     2641 acaacctgca ccgtgccgct catttgattg cccctaaccg tgccgacgaa catcgcgtcg
     2701 gttgtctgac tggccggcgc gggcagcgta attggaaccg tgaagttcac ttctgcacct
     2761 gagatcgatc cggtcgcgat gcttccggag ccgagtggtc cctggagcga tcccgtcaga
     2821 cgctcgcctt cctgttgcag gttcatggtg gcagtcagtt cctgcttttc gttcccggtc
     2881 ccggtaagac tcacagtcaa agaccatgtg cccgaggcat ttgcgcctcg atcacctgga
     2941 gctgtgggcg gtcgcagatc gatcggtttg ccatcgatga agacgtgggc aatgcgacgg
     3001 tctctcgcaa acagatcgcc gcgcgtaacc gtcaggttcg caatcttgcc aacctcgatc
     3061 gtgccaagct gtgacgcaac gccgagcacc tgggccggcc agatcgtcag agcctgaatc
     3121 gcatcgtcac gcgacaaacc gttctcgacg gtcttaccca cgttcgccag atagtcgttc
     3181 atcgaagcca tgccgcctga ttgaaacgcg aaacgtactc cggccgcagc gagccgtccg
     3241 gcggtcttgg gagcttcaac acgttcgcgc aaaatgcgca gcggctcagg ttcagcttcg
     3301 ggtgaagccg ccgtggtacg ccgcggaaaa ttcagtgaca gcagcacggg aacgttcgcg
     3361 gctttcaagc gtgccgccac ccgatccgct tgccgtcctc cattgattat cacgcgcaca
     3421 ttgaagtcgc gcgcgagatc aagcacgcgt tcgatctcgc gttcactgtc ggcctgcatg
     3481 acgatcggca ttcgtccagc cacgaccggc agcaacgctt ccaaagattt gtcctgcgcc
     3541 ggacgcttct gtccgcgcgg gttccgttcg taaatctcgt tcatctcgcg atagcgcttt
     3601 gtatccagca gcatctgccg cacggacgcg aacacgccca tcaacgaacc agggtactga
     3661 ccgccgccga gcggctgcaa cccgatgtat tgcgctacgg gcgaacgcac gatcatctgt
     3721 tgcggtgtgt cgccggcaag attgattagc gccgactgtc ccaggaacac gttaccgcgc
     3781 ggcgccgtgt gcgccgccgt gatgcccgca ttgcgtgctg cttcgatttc cgggccgccg
     3841 ggacgaatca gatcggaagc gagaatctca ggctgcattc ccggaaggtt gggtgagttt
     3901 ggcgaagtcg ccgaaggggc gctctgcccg aagagacccg cgaatgcacc tcctcctccg
     3961 ccgggcgttg gtgacggccg cggaattgcg agcgttgtgt tcgcgtcgat gatgccggga
     4021 tagacggtca ggcccgtgcc gtcaatcacg cgcgcgtcag ccggcgccgc gacgttggct
     4081 ccgacggcga cgattaaccc atcacgaaac acgactgtgc cgcgatcgat taccggtccg
     4141 gaacccgtca cgatgcgcgc gttagtgatc gcgtaagtat ccgtgccgat gcgccgctga
     4201 gcgtcgctgc tgcgcagggc tgccgcaatg acaaaagcga gaagagcgac aatgatgaca
     4261 actaacgagc gcgtgtgatt tcgcattccg tgggttcctc gaccgggctt tcctgttcgt
     4321 ttggagtagc aaaaaataca ggaacatcag cagtcagtaa agagaagcag gcggctgcgc
     4381 tccgtgtctc tgtgaaaaac tcggtgtctc tgtggtgagc gttgtccagg actttcacca
     4441 ccgagtcaca gagaactcac agagacacag agaagaacca agaaccggaa gtagggcaaa
     4501 tgactattag ccgatcgaga catgaagtag aatctccgcc gtcgaaagaa ccgaaatgtt
     4561 agccgtgcgg aaactaatca tcttcgtcat cgccgcgatt gcggtgctgg gcctttctcc
     4621 ggcgccgagt gcgcagaacg cgacctacga ccttgttatt cgtgatggcc tggtggttga
     4681 tggcagcggc agcccctggt atcgcgccga cgtggccatt aaggacgaca agatcgttcg
     4741 catcgcgcct tccattaccg aacccgcaag acagacagtc accgtcaaag gccaggtggt
     4801 ggcgcccggc ttcatcgaca ttcacacgca tgcgcggcgc ggaatttttg aggtgccgac
     4861 ggcagagaat tatgtgcggc aaggcgtgac tactttgatc gaaggtcccg atggtggctc
     4921 gccggttccg ctcgcgccgt tcttcaagag gcttgaagc
//
LOCUS       DATDBY010000413         5461 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1267899, whole genome shotgun sequence.
ACCESSION   DATDBY010000413 DATDBY010000000
VERSION     DATDBY010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5461
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1267899"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1060)
                     /locus_tag="VIT19_07800"
     CDS             complement(<1..1060)
                     /locus_tag="VIT19_07800"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEY5838923.1"
                     /translation="MKYGSPTVQWVSLSVLLLLLVTAVSFTFDRRTDAKQSDRAEKLS
                     PDLKELARGSSKDERVSVIFQFKGNRGAGFDNAVLNSGGRVKLELKQLNARVMEIPAR
                     AVEALASRPDVGFVSLDRPNLPLGHVSLTSGADAARTVSGTNTTGLDGTGLGIAVLDS
                     GIDTTHTAFLDRSNNLRVIVSRDFTGEGRTDDPFGHGTHVAAVAAGNGRVSNAEYLGI
                     APNANLINLRVLGATGTGTVSGILAALDWVLANRSTYNIRIVNASLGTPAIDSYQNDP
                     ICRAVRRLVDAGVVVIAAAGNNGRNGLGQKIYGQIHSPGNEPSAITVGAANTFGTNER
                     SDDEIASFSSRGPTRSSWT"
     gene            complement(1313..3223)
                     /locus_tag="VIT19_07805"
     CDS             complement(1313..3223)
                     /locus_tag="VIT19_07805"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEY5838924.1"
                     /translation="MLALILITPFGLALSERQPLAATKIVRNKVSPDLAQKIRRSQGS
                     PRTKVIVQFNQNPTSDLDSLVTNLGGRITRKLTHLKIRVLDLPLNAIEALAARSDVRF
                     VSPDRPAGAFGHLETTTGTSAVRTETTSVLDGLLGGLITTTTVFDGNGVGIAIIDSGI
                     DRQHTALNNDLGFSRVTVSQDFTGENRTDDPYGHGTHVASIAAGNDQIASGAYTGIAP
                     GANLINLRILDSQGAGTTSSLLAALDWVLTFRTLHNIRVVNLSVGTSAIDSYLDDPIC
                     QAVRRVTDAGVVVVAAAGNNGMSVNGEKIYGQIHAPGNEPSAITVGAANTFGTDARNG
                     DIVTTYSSRGPTRSFWTDASEVRHYDNLIKPDIVAPGNKIVAAAAANNSLLTAHPELD
                     AQVSTWPTRRMMYLSGSSMATPIAAGTAALLLQANPNLSPSLIKAILMYTAQPLSGMN
                     MLEQGAGQLNVNGALTLARRVRTDLSSSTTLGEPLLAGDVPAQQSTISGSTFIWGRGI
                     IVNRAYAMNTELITKYQKVYAPGFSLGDGVDESTNDQAINPTRFTTGVMLGSNVLISS
                     GETLNDGIVFLSLSLLLGDGLMLGDGILVGDGILVGDGIMVGDGVMVGDGVMVGDSSL
                     GSIFGDNTSCMH"
     gene            3603..4808
                     /locus_tag="VIT19_07810"
     CDS             3603..4808
                     /locus_tag="VIT19_07810"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY5838925.1"
                     /translation="MPENKPRILIVDDDGEIRDVLNEFLSRDYDCVTSDSAEKALDAL
                     ATQQFHLILSDIAMTAMSGIEMLPRVVKLAPDSVVVMISGQRTIECAIDAMRAGAFDY
                     ITKPFELREVNAVVRRALDHQSSLKRFRSPEDEQRPHARELMDAVTRQEFVVYYQPQI
                     DIHSRAVVGAEALVRWQHPDLGLRPPAEFISLAEDTGLINQIGELVLREACARAREWQ
                     AQGLDTFRIAVNASPRQLHEKNFAQFVGNILSETQLSPESLELEVTETWLMQNLDAGV
                     EALEQLREMGVRIALDDFGTGYSSLSYLKRLPIDSVKLDASFVKDATTDPDDAALVMA
                     IITLAHTLGKTVIAEGIEREDQLALLRLLRCDEGQGYLFGRPMAALDIDFRPPTAAAP
                     SPSFAQLPV"
     gene            5019..>5461
                     /locus_tag="VIT19_07815"
     CDS             5019..>5461
                     /locus_tag="VIT19_07815"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:5139..5141,aa:Sec)
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEY5838926.1"
                     /translation="MAPDFELKSNLEKDKKVKLSDFRGKKNVVIAFYPLAWTPVUTSQ
                     MPAYEADLDRFREYDAQVLGISVDSVPCNTAWAKSLGGLSYDLLSDFHPKGEVAQAFG
                     AYRASDGISERAIFIVDKEGKFAHVDIHDISDQPDNEELFEVLRKL"
BASE COUNT         1177 a         1499 c         1568 g         1217 t
ORIGIN      
        1 ctgtccacga actacgggtg ggaccgcgcg agctaaagct cgcgatctca tcgtcgctgc
       61 gttcgttggt gccgaaggtg ttcgcggcgc ccaccgtgat ggccgaaggt tcgttgccgg
      121 gcgaatgaat ctgaccatag attttctggc ctagtccgtt cctgccgttg ttacccgcgg
      181 cggcaattac gactacgccc gcatctacca gccggcgcac agcccgacag atcgggtcgt
      241 tttgataaga atcaatcgct ggcgtgccga ggctggcgtt gacgatgcgg atgttgtagg
      301 tcgagcgatt cgcgagcacc cagtcaagcg ccgccaggat gcctgaaact gtgcccgtac
      361 ccgtcgcgcc gaggacgcgt agatttatca ggttcgcatt gggtgcgatc ccgaggtatt
      421 cggcattcga tacccgtccg ttaccggccg cgaccgccgc cacgtgagta ccgtgtccaa
      481 acggatcgtc agttcggcct tcgccggtga aatcacgact gacaatgact cttaagttgt
      541 tactgcgatc taaaaaagcg gtgtgggtgg tatcaattcc ggaatcgaga acggcgatgc
      601 ctaatccagt gccatcaaga cccgttgtgt tagtcccgct cacagtgcga gcagcgtcgg
      661 cgccgctggt cagggaaaca tggcccagag gaaggttggg ccgatcgagc gagacgaagc
      721 ccacatcagg ccgagaggcc aaagcttcaa ccgcccgcgc gggaatctcc atcacccgcg
      781 cgttgagctg ttttagctca agcttgactc ggcctccgga attcaaaacc gcattatcga
      841 aacccgcgcc gcgattgcct ttgaactgaa agatgaccga aacgcgctcg tctttggatg
      901 agccgcgcgc aagttctttc agatccggcg aaagtttctc cgcgcggtcc gattgcttag
      961 cgtcagtgcg ccggtcgaag gtaaaactaa cggcggtgac caaaagaaga agtaagacag
     1021 agagactaac ccactgtacg gtggggctac cgtatttcat ggttcctctt tctcgtcgag
     1081 acagaaatgc ttaccgaggg gctatttctg aagtcgacgg ggcacgctta ttaaggttgc
     1141 atgccaaatt ggtttgcgag tttcaggtcg acgccgaaga gatacgacgt acaaaacgaa
     1201 gcctgaaaaa ggccacccgt cgggtagggg ggcgtaggtt tttggggaaa gtaagttttg
     1261 aggccgccaa gtattccagt ctttttcgcg gccgtcaata ctttcctatc aactaatgca
     1321 tgcaggatgt gttatctccg aaaatcgaac ccagactgga atctccgacc atgacgccgt
     1381 caccaaccat gacgccatcg ccaaccataa tgccgtcgcc gaccagaatg ccgtcgccga
     1441 cgagtattcc gtcacctaac atcaggccat cgccgagcag cagactcaaa ctcaagaaga
     1501 ctatcccgtc gttgagtgtc tcgccactgc taatcagaac gttgctgccg agcatgacgc
     1561 cggtggtaaa tcgagtcggg ttaattgcct gatcgtttgt agactcgtcc accccgtcac
     1621 ccagcgagaa tccgggcgcg taaactttct gatatttcgt gatcaattca gtgttcatcg
     1681 cgtaggcgcg attcacgatg attccgcgcc cccaaataaa cgtgctgccg ctaatcgtgc
     1741 tctgttgcgc cggcacgtcg ccggcgagga gcggctcgcc taatgtggtg gagctgctca
     1801 ggtcggttcg cacgcgacgg gccagcgtca gcgcgccatt gacgtttagt tgtcccgcgc
     1861 cctgctccag catgttcatc cctgagagcg gctgtgcggt gtacattaaa atcgctttga
     1921 tcaagctcgg cgatagattc ggattcgcct gcaacaacaa cgcggccgtg ccggcggcga
     1981 tcggagtcgc catcgacgag ccgctcaaat acatcatccg gcgcgtgggc caggtgctga
     2041 cctgggcgtc taattcgggg tgcgcggtga gcaatgaatt attcgcggca gcagcggcca
     2101 caatcttgtt tcccggagcg acgatgtcag gcttgatcag attgtcgtag tgtcgaactt
     2161 cgctggcatc agtccaaaaa ctacgcgttg gtccccgcga actgtaggtg gtgacgatgt
     2221 ccccgttgcg agcgtcggtg ccaaatgtgt tcgcggcgcc caccgtgatc gcggacggct
     2281 cgttgcccgg cgcatgaatc tgtccataga ttttttcgcc gttgacgctc atgccgttgt
     2341 ttcctgcggc cgccaccacg accacgccgg cgtcagtcac gcgccgaacc gcctggcaaa
     2401 tcggatcgtc cagatacgaa tcgatcgccg acgtgccgac gctcagattg acgactcgga
     2461 tgttgtgaag cgtgcgaaaa gtcagcaccc aatcgagcgc ggccaataga cttgaggtcg
     2521 taccggcgcc ttgcgaatcc aggatgcgca ggttgatgag attcgccccg ggcgcaatgc
     2581 cggtgtaggc gccgctcgcg atctgatcat tgcccgccgc gattgaggcc acgtgcgtcc
     2641 cgtgcccgta cggatcgtcg gtgcggttct cgcccgtgaa atcctggctc accgtgacgc
     2701 ggctgaaacc gaggtcgtta ttgagtgcgg tgtgctgccg gtcgattccc gaatcgataa
     2761 tcgcgatgcc tacgccattt ccgtcaaaca cggtcgtagt tgtaatcagt ccgcctaata
     2821 gtccgtctaa tactgaagtc gtctccgtac gaaccgcgct ggtgccggtg gttgtctcga
     2881 gatgtccgaa cgccccggcc ggcctgtcgg gcgaaacgaa gcgcacatcg gagcgcgcgg
     2941 ccaacgcctc aatggcatta agcggaaggt cgagcacgcg aattttcagg tgagtgagct
     3001 tgcgcgtaat tctcccacct aaattcgtca ccagtgaatc gagatcactc gtcggattct
     3061 gattgaattg aacgattacc ttcgttcggg gcgagccttg agaccgccta atcttctgcg
     3121 ccagatcggg tgatactttg tttcgtacga tcttcgtagc tgctaatggc tgacgttctg
     3181 aaagcgctaa accaaacggt gtaattagaa ttagtgcgag caccgctctt acagcgacat
     3241 taaatctaca agcagaccag ttgcgggatc ttcgcaccgt tgaatctctt ttcttgtgga
     3301 attaattgca tgtcgaggga tggcaagcga tgtgccgcgg tttcgaagac cggggtgccg
     3361 caattctgtt gtccgcttta ctcgctgggg tcaaatgcaa ctgcagatct ccgcaccgga
     3421 gctaatcatg ctgcggcaaa aagcgcgacg tcacgtttag tggcacagac ttcagtctgt
     3481 gattctcgcg attggatcca cagactgaag tctgtgccac agaatgagtg cgggaaaagg
     3541 tcttttctaa ttcatggcat cagctttgcc atgcctcccg cgcactgttc gcgaggctaa
     3601 gcatgccgga aaacaagcca cgtattctga tcgttgatga cgacggcgag atccgcgacg
     3661 tgttgaacga gtttctaagc cgggattacg attgtgtgac gagtgattcg gctgagaaag
     3721 cgcttgatgc actggcgacg caacagtttc atctgattct gagcgacatc gctatgaccg
     3781 cgatgagcgg aatcgaaatg ttgccgcgcg ttgtgaaact ggcgcctgac tcagttgtcg
     3841 tgatgattag cgggcaacga acgatcgaat gtgccatcga cgccatgcgg gcgggcgcgt
     3901 ttgattacat aactaagccg tttgaactgc gggaggtcaa tgcagttgtt cggcgggccc
     3961 tcgatcacca aagcagcctg aaaaggtttc ggagccccga agatgaacaa cgtcctcacg
     4021 cgcgggagtt gatggacgca gtcacccggc aggaattcgt cgtttactat cagcctcaaa
     4081 tcgatatcca ttcgcgcgcc gtggtcggag ctgaagcgct ggtgcgctgg cagcatccgg
     4141 atttgggcct gcgaccgccg gcggaattca tttccctggc cgaagatacg ggcttgatta
     4201 atcagattgg cgagctggtt ctacgcgaag cctgcgcgcg cgctcgagaa tggcaggcac
     4261 aggggcttga tacctttcgg atcgccgtca acgcttcacc gcgccagctt cacgaaaaga
     4321 attttgccca gttcgtcgga aacatcttga gtgaaacgca gctttcgccc gagtcgctcg
     4381 agctggaagt tacggaaacc tggctgatgc aaaacctgga cgccggggtc gaggcactcg
     4441 agcaacttag ggagatgggc gtgcgtattg cactcgacga tttcggcacc ggttattcat
     4501 cgctgagtta tttgaaacgg ttgccgatcg attcagtaaa actggacgcc tcgttcgtga
     4561 aagacgcgac caccgacccg gatgacgcag cgttagtaat ggcaatcatc accctggcgc
     4621 acacattggg caaaactgtg atcgcggaag gaatcgagcg tgaggatcag ttggctttgt
     4681 tgaggctgct gcgttgcgat gaagggcagg gctatctgtt cggcaggccg atggctgcgc
     4741 tcgatattga tttcaggccg ccgaccgctg cggcgccgtc gccatcattc gctcaattgc
     4801 cggtttaatg acctttacgc catattcgcc gaaggcgaac gaattctgag taatgtggaa
     4861 gaaactgatc tcacttgatg gctaaggtgt cttcgtgtgc actcctgctc ttgttcctgc
     4921 ttgaacgacc gctgctaaag agttacgctt aggcagattt aatacagttt tttactcttc
     4981 cgaaggagga tttcgatttc atgcctgaag ttggagacat ggctccggat ttcgagctga
     5041 agagcaacct tgagaaagac aaaaaggtga agctctcgga tttccgtggc aagaaaaatg
     5101 tagtcatcgc gttttacccg ctggcctgga cgccggtctg aacgtcgcaa atgcccgcgt
     5161 acgaagcgga tctcgaccgc ttccgcgagt atgatgccca ggttctgggc atttcagtcg
     5221 acagcgtccc gtgcaacacc gcctgggcaa aaagtctcgg cggactttcc tacgaccttc
     5281 tcagcgactt tcatcccaaa ggcgaagtag cccaggcctt cggcgcgtac cgcgcgagcg
     5341 acggcatttc cgagcgcgcg atattcatcg tcgacaagga aggcaagttc gcccacgtag
     5401 acattcacga catttccgat cagccggaca acgaagagtt gtttgaggtc ttgcggaagc
     5461 t
//
LOCUS       DATDBY010000414         2169 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2907933, whole genome shotgun sequence.
ACCESSION   DATDBY010000414 DATDBY010000000
VERSION     DATDBY010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2907933"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..850)
                     /locus_tag="VIT19_07820"
     CDS             complement(<1..850)
                     /locus_tag="VIT19_07820"
                     /inference="COORDINATES: protein motif:HMM:NF013998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEY5838927.1"
                     /translation="MKFVFSKLFYILLAVGLIPISLSWGRPILGWLALTYDLIIVAAA
                     LFDVWNSKLPQSVRIDRRFGGRFAVGAETDVSIEVANHTSRDIDLVLKDEHPPQMRLA
                     GTREARLEVEAQTSASFIYSLKPPKRGQFSFGRIAVRYLSRWRLSWCQTMVGDPITVK
                     VYPNMRRAREAELKALGTRSFVAARRKSQWRGEGRDFESLRDYVRGDEMRHISWTATA
                     RRGKLVTRQYQMERDQTILIALDAGRLMTGRMENETKLDLAVHATLALMSAAARAGDN
                     AGLLVFG"
     gene            complement(871..1743)
                     /locus_tag="VIT19_07825"
     CDS             complement(871..1743)
                     /locus_tag="VIT19_07825"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEY5838928.1"
                     /translation="MRVTMILLAGWLALTISVRAQGPGPFVELEEQVRSQQGGWNGSK
                     RPLSILFDKERRRLGDRFESELHKYVAGDPEKHYWISLFLEEPSYLHGNKPLLHLSLR
                     LMEQGISLTWHGNDEESAGHRLAFHVLAAVLSHKLALTEQAIRYKNEAEQALAEKSDL
                     RAYFPAMSQEDSKLYDAIKASSKSVRSSLPADQSSDRPHARLSAGVLNGRAKKLPTPA
                     YPAALREVSGQVIVSIVIDEAGKVIWAKAVSGPPQLFQTAEQAAWKAEFALTKLEGKP
                     ERVSGVLIYRFVNR"
     gene            complement(1761..>2169)
                     /locus_tag="VIT19_07830"
     CDS             complement(1761..>2169)
                     /locus_tag="VIT19_07830"
                     /inference="COORDINATES: protein motif:HMM:NF036831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEY5838929.1"
                     /translation="QQVVARWDAGFNARRLTDIQIQPLAADAISACRAEVRNMRVEPG
                     VQRYIVDIVRRTRDHAAAHYGASPRAAVALLLCSKALSAIRGRDFTTPDDVRDIARPV
                     LRHRLTLRAEAELDGATPDSVIGDILQSAEVPR"
BASE COUNT          468 a          665 c          596 g          440 t
ORIGIN      
        1 ggccgaacac caacagaccc gcattgtctc cggcgcgcgc cgccgcggac atcagcgcca
       61 gcgtcgcgtg caccgcaaga tcaagctttg tttcgttttc cattcggccg gtcatcaagc
      121 ggccggcgtc cagcgcgatt aagatcgtct ggtcccgctc catctgatac tgccgcgtga
      181 ccaacttgcc gcgtcgtgcc gtagcggtcc acgaaatatg gcgcatctcg tcgccccgga
      241 cgtaatcgcg cagcgactca aagtcgcggc cttccccgcg ccactgcgat ttgcggcgcg
      301 cggcgacaaa tgaacgagtg ccgagcgctt tcaattcagc ttcgcgcgcc cgtcgcatgt
      361 tcgggtagac cttaacggtg atcggatcgc caaccatcgt ctgacaccac gacagtcgcc
      421 aacgcgaaag ataacgaacg gcaattcggc caaacgaaaa ctgaccacgc tttggtggtt
      481 tcaggctgta aatgaacgac gcactggttt gggcctcaac ctcaagccgc gcttcgcgcg
      541 tgcccgcgag tctcatctgt ggcggatgtt cgtccttcag aacaagatcg atgtcgcgcg
      601 acgtgtgatt cgcaacctca atagagacgt ccgtttccgc gccgactgcg aaccgcccgc
      661 cgaagcgacg gtcgatgcgc acgctttgcg gaagtttgct gttccacaca tcgaacagcg
      721 cggcggcgac aataattaga tcgtaagtga gcgcgagcca accgagaatc ggccgtcccc
      781 acgacagaga gatgggaatg agccccacgg caagcaaaat gtaaaagagt ttagagaaga
      841 cgaatttcat ttggcttgag gagagcgacc tcagcgattc acgaacctgt agatcaaaac
      901 tccggaaact ctttcgggtt tgccttcgag ctttgtcaga gcgaactccg ccttccacgc
      961 cgcttgttct gcagtttgaa acaattgagg agggccacta acggctttgg cccaaatgac
     1021 tttaccggct tcgtcaatca caatgctgac aattacctgc cctgacactt cccttaacgc
     1081 ggcaggatat gcgggcgtcg gcagtttttt ggcacggcca ttcagaacgc cagccgagag
     1141 acgggcgtgt ggccgatctg aactttgatc cgcaggaagc gacgaccgca cactcttact
     1201 tgatgccttt atcgcatcat agagtttcga atcttcctga ctcattgcag ggaagtaagc
     1261 gcgcaagtca gatttctctg ccaatgcctg ttcagcttcg ttcttgtatc tgatcgcctg
     1321 ttcggtaaga gctaacttgt gactgagcac ggccgctaga acatgaaaag cgagtctgtg
     1381 gcccgcactc tcttcgtcgt tcccgtgcca tgtcaaacta ataccttgct ccataagccg
     1441 cagcgaaaga tgaagtagcg gcttgtttcc gtgaaggtag gacggctcct cgaggaacaa
     1501 ggagatccag tagtgctttt caggatcgcc cgcgacgtac ttgtggagtt cactctcgaa
     1561 tcgatcgccg agccggcgcc gttccttatc aaacagaatc gataggggtc gcttgctgcc
     1621 gttccaaccg ccttgctgcg aacgcacttg ttcctccaac tcgacgaaag gccccggccc
     1681 ttgggcgcgc acagagatcg tcagcgcgag ccaacctgcg agcaagatca ttgtgactct
     1741 catgatttgg tttccagccg ctaccgcggg acctccgcgg actgcaggat gtcaccgatc
     1801 accgaatcgg gtgtcgcacc atccaactca gcctccgcgc gcagcgtcag gcgatggcgc
     1861 agcacggggc gcgcgatgtc gcgcacgtca tcgggtgtcg taaagtcgcg accgcgaatt
     1921 gccgacagcg cttttgaaca caacaacaat gcgaccgcgg cgcgcggact ggcgccgtag
     1981 tgcgcagcgg cgtgatcgcg cgtgcgccga acgatatcca cgatgtaacg ctgcacccca
     2041 ggctcgaccc gcatatttcg tacttcggcg cggcaggcag aaatcgcgtc cgcagccaac
     2101 ggctgaatct gaatatcggt caggcgccgc gcgttaaagc ccgcatccca acgcgctacg
     2161 acctgctgc
//
LOCUS       DATDBY010000415         2109 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_269658, whole genome shotgun sequence.
ACCESSION   DATDBY010000415 DATDBY010000000
VERSION     DATDBY010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269658"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VIT19_07835"
     CDS             complement(<1..203)
                     /locus_tag="VIT19_07835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838930.1"
                     /translation="MKVNLTQLAHARSGDKGDTANVGLIALREEWYPVLVREVTASRV
                     KEHFGEICKGEVERFELPNLGAL"
     gene            complement(225..1592)
                     /locus_tag="VIT19_07840"
     CDS             complement(225..1592)
                     /locus_tag="VIT19_07840"
                     /inference="COORDINATES: protein motif:HMM:NF018938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEY5838931.1"
                     /translation="MKEKIRIAAGQGFWGDLPDAPVRQVEDGPIDYLMLDYLAEVTMS
                     IMQKQKARDPNAGYARDFVPLMKQILPACVERDIKVVANAGGVNVQGCAAAVRSVAQE
                     LGLGGKVKIGIVTGDDILDRIDDLLTRGVELRNLDTDAPLATVRDRIQSANAYLGAAP
                     IVEALNRGANVVITGRSTDTGLTLGPMIHEFGWAADDWDKLSSGTIAGHIIECGAQCS
                     GGNCQYEWQTIPDLANVGFPIAEASPDGTFIITKHEGTGGRVSVPSIKEQLLYEMGDP
                     HAYITPDCVADFTTIRLADDGRDRVRIFGIKGRPATDSLKVSISYSAGYKAIGTLVYA
                     WPDAYAKAKAADQVLRARLDRLGLRFDQVLTEFVGANATHGPLAGDPSPDLAEVQLRV
                     GVRGDDRAAIERFTKEIAPLVLTGPPAVTGFAGGRPKVEEIVAYWPALIPKSEIVSHV
                     EVIET"
     gene            complement(1711..>2109)
                     /locus_tag="VIT19_07845"
     CDS             complement(1711..>2109)
                     /locus_tag="VIT19_07845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838932.1"
                     /translation="NKQEPADLSGTYTGRMQHGDDVRDATLTISGNSFTMTSGADSHT
                     GRITAVTTCGYTAVTIMHGDGGTSEPGKTSPPNKVMSLRAKKVGDSLTLMSVPGEPDK
                     VMFTSGGGAGRPRRQRPRRPAPPPPPPTQQ"
BASE COUNT          410 a          675 c          562 g          462 t
ORIGIN      
        1 ttgagcgcgc cgaggtttgg caactcgaag cgttccactt cgcctttaca gatttcgccg
       61 aagtgttctt ttacgcgaga cgcggtcact tcgcgtacga gcaccggata ccactcttca
      121 cgcaaagcga tcaatccgac attggccgta tcgcctttgt cgcccgaacg cgcatgcgcg
      181 agttgcgtca agttcacttt caaggtttgg tcttcctctt ggtcctacgt ttcgatcacc
      241 tcgacgtgcg agacaatttc actcttcgga atcagcgccg gccaatacgc cacgatctct
      301 tccacttttg ggcggcctcc ggcaaaaccc gtcacggctg gcggcccggt taaaaccagc
      361 ggcgcgattt ctttcgtgaa ccgctcgatc gccgcgcgat cgtctcctcg cacacccacg
      421 cgcagttgca cctcagccaa atccggcgaa gggtcgcccg ccaacggccc gtgcgtagcg
      481 tttgccccca caaattcagt cagcacctga tcgaatctca gtccaagccg atcgagacgc
      541 gcccgcagaa cctgatcggc ggccttcgct ttggcgtagg catcgggcca cgcgtaaacc
      601 aatgttccaa tagctttgta gcccgccgaa tagctgatcg agaccttcaa agaatctgtc
      661 gccggacgac ctttgatccc gaagatgcgc acgcgatctc tcccgtcatc cgccaatcga
      721 attgtggtga agtcggcgac gcagtccggt gtgatgtagg cgtgcggatc acccatctcg
      781 taaagcagtt gttctttgat cgatggaacg ctcacgcggc cgccggtgcc ttcgtgttta
      841 gtgatgatga aggtgccgtc gggcgacgct tcggcgatcg gaaatccgac gttggccagg
      901 tcgggaatgg tctgccattc gtactggcag ttcccgccgg aacactgtgc cccgcattcg
      961 atgatgtgac ccgcaatcgt tcccgatgaa agcttgtccc aatcgtctgc agcccacccg
     1021 aactcatgaa tcatcgggcc cagcgtcagt cccgtatcag ttgatcgtcc cgtaatgacc
     1081 acgttcgcgc cccggttgag agcctcaaca atgggcgcgg cgcccaggta agcattggcg
     1141 ctttggattc gatcgcgaac cgtcgcgagc ggcgcatccg tgtccagatt gcgaagttca
     1201 acgccgcgag tcaacaagtc gtcgatccga tcgagaatgt catcacccgt gacgattccg
     1261 attttgactt taccgccgag acccaactcc tgcgccacgc ttcgaaccgc agctgcgcag
     1321 ccctggacat tcacgcctcc ggcattggcg acaactttta tgtcgcgctc aacgcacgcc
     1381 ggcagaattt gcttcatcag cggcacgaag tcgcgcgcgt aacctgcgtt tggatcgcgg
     1441 gccttctgtt tctgcatgat cgacatcgtg acctcggcca gatagtcgag cattaaataa
     1501 tcgatgggcc cgtcttcaac ctggcgcaca ggcgcgtcag gcaagtcgcc ccagaaaccc
     1561 tgaccggccg cgatgcgaat cttttctttc atctggaatt caacacagga acacgagact
     1621 gagcgaaaca agaatctacc ggctgctcac ttcagccgca tccagcaaaa acaagttcgc
     1681 ccagccccgt acaaaaagta accgcgacac ctattgctgc gtgggcggtg gtggtggagg
     1741 cgccggccta cgcgggcgct gacggcgggg tcgccccgcg cctcctcccg acgtaaacat
     1801 caccttgtca ggttcccccg gcacgctcat caacgtcagg ctgtcgccaa cctttttcgc
     1861 gcgtagcgac atcaccttgt tcggcggcga cgttttgcca ggttcagaag ttccgccgtc
     1921 accgtgcatg atcgtcactg ctgtgtagcc acacgtcgtc accgctgtaa ttcgtccggt
     1981 gtgcgagtct gctccggacg tcatcgtaaa actgttgccg ctaattgtta gcgtcgcatc
     2041 gcggacgtcg tctccgtgtt gcattctgcc ggtgtaggtt cccgaaaggt ccgccggctc
     2101 ctgcttatt
//
LOCUS       DATDBY010000416         2294 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1412860, whole genome shotgun sequence.
ACCESSION   DATDBY010000416 DATDBY010000000
VERSION     DATDBY010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2294
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1412860"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..920)
                     /locus_tag="VIT19_07850"
     CDS             complement(<1..920)
                     /locus_tag="VIT19_07850"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEY5838933.1"
                     /translation="MARVLFLLQSATPTPADSPEKFPAWLTLVFLIGIAFVALLLLIG
                     LVRGWFSRKGGAAQIFANLSADIRRRLGASATNRGLRVWRWLFVLIALTMFGFHVYWA
                     NYARDRNPKFQEMSYKDLRNRRLSESTLRGWIYDRKGRPLAYYKKDSSGQIVREYPMD
                     DPFAHLFGADRGDPGLERALFGTESGAVPEVLQIIKGETVEQKLNKDYTLTIDKDLQQ
                     AVVDQLKGNPGAVVIFNPQTGEVLAMYSNPAYSLKQVQDEAAWIRLDKDRKQKPLLNR
                     ATNEYYVPGSTFKTVMMYAAFRHGMQNARF"
     gene            complement(924..1757)
                     /locus_tag="VIT19_07855"
     CDS             complement(924..1757)
                     /locus_tag="VIT19_07855"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEY5838934.1"
                     /translation="MAEEQNQTPKRRRETIVPERLMRRVLEGVGDVVDRKLGRTPDSE
                     SGLTTDHLVRRMNALIDERARDDKRRGRIAPHHLKLKVEWGKHSETAPEVTKRLEQEV
                     LAAAIDHINDSRYRTLAPVSIVTEVDIFTKGIAVDPNYGEFEEELQREDLERKLGKDA
                     LKNKPRHGEKLNVTYSVHISTPELSKDVQLEFAPGGRRVNVGRATDSDLHLNHSSVSK
                     IHASLRMDNLGTIVVADTGSTNGTHINGQRIPYGEARPLNEGDLLAFGDVEVRFRRIN
                     S"
     gene            complement(1819..>2294)
                     /locus_tag="VIT19_07860"
     CDS             complement(1819..>2294)
                     /locus_tag="VIT19_07860"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEY5838935.1"
                     /translation="AKQTKSPLLVVLHEINNPVNVGAIVRTAEAAGATGIIATANTAD
                     PFSPKALRGAMGSAFRLPIWSGPSFAAAVAWCRSRKILTIAADLSGSAVLGDVDWRKS
                     SAIIVGRESTGLSPDEVAATDASVRIPMHGAAESLNVAVATGIILFEAARQRAPN"
BASE COUNT          450 a          659 c          659 g          526 t
ORIGIN      
        1 ttgaagcgcg cgttctgcat tccatggcgg aacgcggcgt acatcatcac cgttttgaag
       61 gttgaacccg gcacgtagta ttcgttggtc gcgcggttta gcagcggttt ctgtttgcga
      121 tctttgtcca ggcgaatcca tgccgcttcg tcctgcacct gcttcaggct gtacgcggga
      181 ttgctgtaca tagccagcac ttcgcccgtc tgcggattga aaatcacgac tgcgccggga
      241 ttgcccttga gctgatctac gacggcttgc tgaaggtctt tgtcgatcgt cagcgtgtaa
      301 tctttgttca gcttctgttc gacggtttcg cccttgatga tttgcaggac ttccgggacc
      361 gcaccgcttt cagttccgaa caacgcgcgc tccagccccg gatcgccgcg gtccgcgcca
      421 aacaggtgcg caaacggatc atccatcggg tattccctga cgatctgacc ggacgaatct
      481 ttcttgtagt acgccagcgg ccggcctttg cggtcgtaaa tccatccgcg caaagttgat
      541 tcagaaagac gacggttgcg cagatccttg tagctcatct cctgaaactt cggatttcga
      601 tcgcgcgcgt agtttgccca gtagacgtga aagccgaaca tggtgagcgc tattagcacg
      661 aacagccagc gccagactct caggccccga ttagttgccg acgcgccaag gcgtcggcga
      721 atgtcagccg agaggttcgc aaaaatctgc gcggctccgc ccttgcggct gaaccaacct
      781 cgcaccagtc caatcagcag cagcaaagca acgaacgcaa tgccgatcag aaaaacaagt
      841 gtcagccagg ccggaaattt ttccggagag tctgcaggcg tgggagtggc tgattgtaaa
      901 agaaacagta cgcgcgccat gtgtcaggag ttgattctac gaaaacggac ctcgacatcg
      961 ccaaacgcga ggaggtcacc ttcatttaag gggcgtgctt caccgtaggg gattcgttgt
     1021 ccgttgatgt gcgtgccgtt ggtcgagccc gtatcggcga ccacgatcgt gccgaggttg
     1081 tccattcgca gcgacgcatg aatcttggaa acgctcgagt gattcagatg cagatcactg
     1141 tcagtggcac gaccaacatt tacacggcgt ccgccgggag cgaattccaa ctgcacgtct
     1201 ttcgaaagtt cgggggtaga aatgtgcacg ctgtaggtga cgttcagttt ctcgccgtga
     1261 cggggcttat tcttcagcgc gtctttgcca agtttgcgct cgaggtcttc gcgctgaagt
     1321 tcttcttcaa attcgccgta gttcggatcg accgcgattc ctttcgtgaa aatatcaact
     1381 tcggtcacga tgctgaccgg cgccagggtg cgataacgac tgtcgttgat gtgatcgatg
     1441 gctgcggcaa ggacttcctg ctcgagccgc ttcgtcactt caggagccgt ctcggaatgt
     1501 ttgccccact cgactttcaa tttcagatga tgaggggcga tgcggccgcg gcgtttgtcg
     1561 tcgcgcgctc gttcatcgat gagcgcgttc atccgcctaa ccaggtgatc cgtggtcaga
     1621 ccgctttcag agtcgggcgt ccggccaagc ttccggtcga cgacgtctcc gacgccctca
     1681 aggacgcgtc gcatcagccg ttcaggcacg atcgtttcgc ggcgcctttt tggagtttgg
     1741 ttctgctctt ctgccatgaa cgttaatacg ttgagaccac aaaacctgtt cgctgggtta
     1801 ttccgtcaca aaaatacact agtttggcgc gcgctgtctt gctgcttcga acaggatgat
     1861 gccggtggcg accgctacat tcaggctttc cgcggctccg tgcatgggaa ttcgaacaga
     1921 tgcatccgtg gccgcgacct cgtcaggcga cagcccggtt gattcccggc caacgattat
     1981 tgcgctcgat ttgcgccaat cgacatcccc gagcactgcc gagccggata aatccgctgc
     2041 gattgttagg atttttcgcg agcgacacca ggcaacggcc gccgcgaacg atgggccgct
     2101 ccaaatcggc aagcgaaacg ccgagcccat ggcgccgcgc agagccttag gggaaaacgg
     2161 atcggcggtg ttcgcggtcg cgatgatccc ggtagcgccc gccgcttccg ccgtgcgtac
     2221 gatcgcgccg acgttcaccg gattgttgat ctcgtgaagg acaacgagga gcggcgactt
     2281 cgtttgcttc gcgg
//
LOCUS       DATDBY010000417         4153 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2995511, whole genome shotgun sequence.
ACCESSION   DATDBY010000417 DATDBY010000000
VERSION     DATDBY010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4153
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2995511"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /gene="msrP"
                     /locus_tag="VIT19_07865"
     CDS             <1..541
                     /gene="msrP"
                     /locus_tag="VIT19_07865"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF003767.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HEY5838936.1"
                     /translation="VEGWSMVIPWVGFPLNALLKQAEPLSAAKYVAFQTLLDPRRMPN
                     QNTGLLDWPYVEGLRMDEAMHPLAILATGLYGETLPPQDGAPIRLVVPWKYGFKSIKS
                     IVKITLVADEPPATWNIQAPNEYGFYSNVNPGVSHPRWSQKYERRIGEFRSRETLLFN
                     GYAEQVAHLYAGMDLRVNY"
     gene            631..1251
                     /locus_tag="VIT19_07870"
     CDS             631..1251
                     /locus_tag="VIT19_07870"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HEY5838937.1"
                     /translation="MKDTRFAKLLLLINGLVPLGLLLWDVWRKQVGANPLEFVTRTTG
                     MLTLVFLLITLAVSPLRRITGLNWLIKFRRMLGIFAFFYGALHLLTYIAFDRFFRFST
                     IPGDIAGRRFIAVGVAAFFLMLPLAVTSTDAMVKRLGGKRWARLHLVIYPAAILGVLH
                     FYMLVKSDLTRPLTFAFLLALLLGFRIFAKYHQSRGRLTADLKQSL"
     gene            1248..1565
                     /locus_tag="VIT19_07875"
     CDS             1248..1565
                     /locus_tag="VIT19_07875"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEY5838938.1"
                     /translation="MNDEKRTSERVPVNLPTRWHGAAGTYEGRVEDVSVTGCFVNTKG
                     AVDVGEIVSLLIQLPSGRWLPIRGKVAFYQQLTGFSISFSILDDKERETLDELVAQQS
                     STT"
     gene            1575..2336
                     /locus_tag="VIT19_07880"
     CDS             1575..2336
                     /locus_tag="VIT19_07880"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5838939.1"
                     /translation="MLDPTKRFSNRVENYQKYRPRYPTEITALLEKDCALTPDSVIAD
                     VGSGTGFLSELFLRNGNRVLGVEPNAEMRAAGERFLAGYPNFVSIDATAEATTLPDLS
                     VDFVTAGQAFHWFDREKTHREFHRILKTDGWVVIVWNTFPTGRSALVKAYDDVLVRFG
                     TDYREVAREIENSGIEKFFPPDQYQRARFDFQQTFDWEGFKGRLLSASYAPNADSANY
                     EPMLRDLRQVFDSHQKDGAVVFDYDTVVYYGRLTV"
     gene            complement(2390..>4153)
                     /locus_tag="VIT19_07885"
     CDS             complement(2390..>4153)
                     /locus_tag="VIT19_07885"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEY5838940.1"
                     /translation="QVYGHGTFVAGVIAGNGQQSAGKYAGVATGANILGLSAGDANLF
                     FVLSGFDYLLANSSSFNVRVVNCSFSAKTVFDFNDPVNIATKMLTDNGVNVVFSAGNT
                     GPGDDSINPYAVAPWVISVGATDNQGRLADFSSRGEFGSPMFRPTLVAPGVGEVSLRP
                     STVASVTTAGGLAEKDTKDAKLSSGELPYYTTGSGTSFSAPHVAGVIALMLEANPQLT
                     PAQVRDILQRTATPLTAYYLHEVGAGMLNSHAAVLESAFPQRRFGQWRGLAFQNQVEF
                     EESTPQFFTGSVAPGSVNDSAVAVPQDALRASVQIAWGGLLSNSKLRLSLLDSSGRQQ
                     AIASEAVFPGLTGRRQSSVINSPLGGVWTARVANVMGPAGVPMSGTDNDVTSGSGQSY
                     YGFVSVTRARYPALADIEGLDIASVTGIQQSFRSLVMAPIGQHFRPGFAVTRSDLAKA
                     MVLGGRVPQYLPAQSRYSDVRDRSTMLFVESVQARPNGALFPSVTGSTFQPNATVDRL
                     SAVVALVRAAGLQQQAETGTHTLTYTDTLSIPSSLRGYVAVAIQNGLISSNGTAFNPQ
                     GSFTRVDLARAMARLSSMPVQ"
BASE COUNT          889 a         1191 c         1170 g          903 t
ORIGIN      
        1 cgttgaaggc tggtcgatgg tgatcccctg ggttggtttt cccctgaacg cgttgctgaa
       61 acaggctgag ccgctctctg cggccaaata cgtggccttc cagacgctgt tggatcccag
      121 acgcatgccg aatcagaaca caggcttgct cgattggcct tacgttgagg gcctcaggat
      181 ggatgaagcg atgcatccgc tggcgattct ggctaccgga ctgtacggcg agaccctgcc
      241 gccgcaggat ggcgcgccga ttcgtttggt tgtgccctgg aagtacgggt ttaagagcat
      301 taagtcgatt gtgaagatta ctctggtcgc ggatgagccg ccggcgacgt ggaacattca
      361 ggcgccgaac gagtacgggt tctattcgaa cgtaaatccg ggcgtcagcc atccgcgttg
      421 gagccaaaaa tacgagcggc ggatcggcga gttccgctca cgcgagacgc ttttgttcaa
      481 tggttacgcg gaacaggtcg cgcatttgta cgcgggaatg gatttaaggg tgaattactg
      541 aaaatagcta tctgccggtc agctatcagc tttcagccaa acgtacaacg gcttgctgat
      601 agctgaaagc tgataaccga tagctttaag atgaaagaca cacggttcgc caaacttctt
      661 ctcctaatta acggcctcgt gccgctgggg cttttgcttt gggacgtgtg gcgtaaacag
      721 gttggcgcaa atcccctcga atttgtgacg cgcacgaccg gtatgctgac gctggttttt
      781 ctgcttatca cgctcgccgt cagtccattg cgccgcatca ccggcctgaa ctggttgatc
      841 aagtttcgtc ggatgctggg catcttcgcg ttcttttacg gcgcgctgca ccttttgact
      901 tacatcgcgt ttgaccgctt cttccgtttc tcgacaattc ccggcgacat tgccgggcga
      961 cgtttcatcg ccgtgggcgt cgcggcgttc ttcctgatgc tgccgttggc ggtcacttca
     1021 accgacgcga tggtcaagcg tttgggcggc aaacggtggg cgcgtctgca tctcgtcatc
     1081 tacccggccg caattttggg tgtcctgcat ttctacatgc tggtaaaatc cgacttgacc
     1141 cggccgctga cgtttgcgtt cttgctggcc ctgctgctgg gattcagaat tttcgccaag
     1201 tatcatcaaa gtcgaggtcg cctgactgct gatttgaaac aaagcttatg aatgatgaaa
     1261 agcgaacaag tgaacgcgtc ccggtgaatc tgccgacgcg ttggcacggc gcggcgggca
     1321 cctacgaggg ccgcgttgag gatgtcagcg tgaccggatg tttcgtaaac acgaaagggg
     1381 cggtcgatgt cggcgaaatc gtgagcttgc tgattcagct tccctccggt cgttggctgc
     1441 caatacgcgg aaaggtcgcg ttttatcagc aactgaccgg cttcagcatt tcgttttcga
     1501 ttttggacga caaagagcgc gaaactttgg acgaacttgt cgcgcaacag tcatcaacta
     1561 cctgaaccgc cccgatgctc gacccgacca aacgcttttc caaccgcgtc gaaaactacc
     1621 agaagtatcg tccgcgttac ccaaccgaaa tcactgcgct gcttgagaaa gactgcgccc
     1681 tgacgcctga ttcggttatc gccgatgtcg gttccggcac cgggttcctc agcgagttat
     1741 ttctgcgcaa cggaaatcgc gtgcttggcg tcgagccgaa tgcggaaatg cgcgctgccg
     1801 gcgaacggtt cctcgccggt tatccgaact tcgtgagcat cgatgcgacg gccgaagcca
     1861 cgacgcttcc ggacttgtcg gttgatttcg tcacggccgg gcaggccttt cactggttcg
     1921 atcgagagaa aacgcaccga gagttccacc gaatcctgaa gaccgacggc tgggttgtca
     1981 tcgtctggaa cactttcccc actggccgga gcgccttggt caaagcttac gacgacgttc
     2041 tggtgcgatt cgggacggat tatcgcgagg tcgccagaga gatagagaac tcgggcatcg
     2101 agaaattctt tccgcccgac cagtaccagc gagcgcgatt cgattttcag cagacgttcg
     2161 actgggaagg attcaaaggg cggctgctat ccgcttctta cgcgcctaac gccgacagcg
     2221 ccaattacga gccaatgctg cgcgacctgc ggcaggtctt cgattcacat cagaaagatg
     2281 gagcagtcgt ctttgactac gacacggtgg tttattacgg ccggcttact gtttaggcgc
     2341 gggcgtcgcc ctatccgtcg gcgggcaaag cccgcctcta aactgaaagc tattggactg
     2401 gcatggaact caggcgggcc atggcgcgag ccagatccac acgagtaaat gacccttgcg
     2461 gattaaaagc cgtcccattc gaactaatta gtccattctg aatggccacc gcaacgtatc
     2521 cacgcaaaga cgacggaatt gaaagggtgt ccgtgtaagt cagcgtgtgt gttcccgtct
     2581 cggcctgttg ctgcaagccc gccgcacgaa ccagcgccac aacggccgac agtcgatcaa
     2641 ccgtggcatt tggctggaag gtgctgccgg tcacagatgg gaacaaagct ccgttaggcc
     2701 ttgcctggac gctctcaaca aataacatcg tcgaccgatc gcggacatcg ctgtaacgcg
     2761 actgcgccgg caaatactga ggcacgcgcc cgcctaacac catcgctttc gctaagtcac
     2821 tgcgggtgac ggcaaatccc ggacggaagt gttggccgat gggagccatt acgagcgagc
     2881 ggaaactctg ctgaattccg gtgactgagg cgatatcgag accttcaata tcagccagcg
     2941 ccgggtagcg ggccctggtc acgctcacaa atccgtagta gctctgtccc gagccactcg
     3001 ttacgtcgtt atcagtgccc gacatgggca cgccggctgg gcccatcaca tttgcgacgc
     3061 gcgcggtcca aacgcccccc aacggcgaat taattaccga gctctgacgg cgaccagtaa
     3121 gtcctggaaa aactgcttca ctggcaatcg cctgctgccg tcccgatgaa tccaacaatg
     3181 aaagcctaag tttgctgttg ctcaagagtc cgccccaggc gatctgcacc gacgcgcgca
     3241 aggcatcttg cggaaccgcg actgctgaat cattgaccga acccggcgcg actgagcccg
     3301 tgaaaaactg tggcgtactc tcttcaaact caacttgatt ttgaaaagcc agcccacgcc
     3361 attggccaaa acgtctttgt gggaacgcag attccaaaac ggctgcgtga ctgttgagca
     3421 tcccagcgcc aacttcgtgg aggtagtagg ccgtcagcgg tgtggcggta cgttgcagaa
     3481 tgtcgcgcac ctgcgccgga gtcagttgcg ggtttgcctc gagcatcaaa gcgattacgc
     3541 ccgcgacgtg tggcgcagaa aaactggtgc cgctgccggt cgtgtaatac gggagctcac
     3601 ccgaactcaa tttcgcgtct ttcgtgtctt tttcggccag gccgcccgcg gtagttactg
     3661 aggcaacggt tgagggccgc aaactaactt cgccgacgcc gggggcaacc agcgtgggcc
     3721 ggaacatcgg actgccgaat tctccgcgcg acgaaaagtc cgccaaccgg ccttgattat
     3781 cagtcgcgcc cacgcttatc acccacggag ccaccgcata cggatttatc gaatcatcac
     3841 ccggtccggt attacctgcg gaaaagacca cgttgacccc gttatcggtc aacatcttcg
     3901 tggcaatgtt taccgggtcg ttaaaatcga agactgtttt tgccgagaag ctgcaattca
     3961 cgacgcgcac attgaagctg gacgaattcg ccagcaggta gtcaaagcct gagagaacga
     4021 agaacagatt cgcatcaccg gcgctcaggc cgagaatatt tgcgcccgtt gctacaccgg
     4081 catatttccc tgcggactgc tgtccgttgc cggcgatcac acccgcgaca aatgtcccgt
     4141 gaccataaac ctg
//
LOCUS       DATDBY010000418         2478 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_18363, whole genome shotgun sequence.
ACCESSION   DATDBY010000418 DATDBY010000000
VERSION     DATDBY010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2478
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18363"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VIT19_07890"
     CDS             <1..310
                     /locus_tag="VIT19_07890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838941.1"
                     /translation="KKDGEALLKKMKAWDEDMVQRKSKAYDDVENFPNKFTANYLFMI
                     NATESDIPRVNQPSLDRMRELNAQWAALKARATEILEKDIPALNKRMWDAGLGAIWKF
                     "
     gene            523..1392
                     /locus_tag="VIT19_07895"
     CDS             523..1392
                     /locus_tag="VIT19_07895"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HEY5838942.1"
                     /translation="MKTRHYVWLILAVLLGTALNSFAQTTQSPLPPPTGYVNDYVGAI
                     DRTTKSELETTLTNLDRQQGIQFAVAVVDTVGGQNIFDYSLGVARGWGLGSKDTQKPS
                     LLLVVAIKDRKYFTQVSRHLEGDLPDGLAGQIQREKLVPAFRGSDYSGGVRETIYEYI
                     RTIARKQGFSTAKIFPAGTGSQPPVRASRPQANFCMSIVVIVVIVIVVLALLAAARKG
                     GMGGPGGGGSGGWLGWLLLSMLMSGRSGSGSSGWSGGGFGGFGGGGGGGGGGFGGFGG
                     GGDFGGGGAGGSW"
     gene            1469..2086
                     /locus_tag="VIT19_07900"
     CDS             1469..2086
                     /locus_tag="VIT19_07900"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEY5838943.1"
                     /translation="MGKKVGLIILGVIVVVGLILAIWGISSYNGLVTKRQNVDAQWAE
                     VQNQMQRRADLIPNIVATVKGIAGLEERVFTRIAEARANLLSTIQNPNATTEQKIAAD
                     QNLTGAMRDGGLLGSGGRFLMITENYPQLKSNENFLRLQDELAGTENRLATSRRDYTL
                     AAQDYNTSRSRFPTVLIAGLLGFPAQPYFQADPGAQKAPTVDFGK"
     gene            2172..>2478
                     /locus_tag="VIT19_07905"
     CDS             2172..>2478
                     /locus_tag="VIT19_07905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838944.1"
                     /translation="MTDNTKSKVLRQLVEALLAAHGENLASITLYGSTAVENTTDDQA
                     HHNVLVVLRRIALEDLRLSVEPLRVWTKASQPMPVYFSLDELQRAADVFPIEFLQMQK
                     "
BASE COUNT          569 a          647 c          747 g          515 t
ORIGIN      
        1 caagaaggac ggcgaagcgc tgctgaagaa gatgaaagcg tgggacgaag atatggtgca
       61 gcgcaaatca aaggcgtacg acgacgtcga gaactttccg aacaagttca ccgccaatta
      121 tcttttcatg atcaacgcga ccgagagcga cattccgaga gtcaatcaac cgtcgctcga
      181 tcggatgagg gagttgaacg cgcaatgggc tgcattgaaa gcgcgagcaa ccgagatcct
      241 cgaaaaagac attcctgccc taaacaagcg gatgtgggat gcgggattag gagcgatctg
      301 gaaattttag gctggtaaac cacttggctc gccacgttcg ctctgtgtct cagtgaaatt
      361 ttctgtgact ctgtggtgaa tcatttgtcg gactatttca ccacagagga cgcacagaga
      421 cacagagaaa aacaataaac acacatcatt ctgagcttgt ctccaacggc gttttgcaac
      481 ggcccctgaa ttgcggacaa tagcagctga ccctatttgc cgttgaaaac gagacactac
      541 gtttggctca ttctggccgt gcttcttggc acggccttga attcgtttgc gcagaccacg
      601 caatcgccgc tcccgccacc taccggttat gtcaacgatt acgttggcgc aatcgatcgc
      661 acaaccaaga gcgaactgga aacaacgctc acgaatttgg atcgtcagca ggggattcag
      721 tttgccgtcg ccgttgtcga caccgtgggt ggccagaaca tctttgacta ctcgcttggg
      781 gtcgcgcgtg gctggggcct gggttcgaag gacacccaaa agcccagcct cctcctggtg
      841 gtcgcgatca aagatcgaaa gtacttcact caggttagcc gtcatctgga aggcgatctt
      901 cctgacgggc ttgccggcca aattcagcgc gaaaaattag taccggcgtt tcgcggaagt
      961 gattacagcg gtggggttcg cgagacgatc tacgaataca tccgcacgat cgcgcgcaaa
     1021 caaggcttca gtaccgccaa gatttttcct gccggaacgg gctcgcagcc gcccgttcgc
     1081 gcgtcgcgtc cgcaggcgaa cttctgcatg tcaatcgtcg tgatcgtcgt tatcgtgatc
     1141 gttgtgctcg cgcttcttgc cgcagcgcgc aaaggcggaa tgggcggacc cggaggcggc
     1201 ggtagcggcg gttggctcgg ttggttgctc ttgagcatgc tgatgagcgg gcggagcggc
     1261 tctggctcga gcggttggtc gggcggcggc tttggcggtt ttggcggcgg cggtggcggt
     1321 ggaggcggcg gcttcggagg cttcggcggg ggcggagatt tcggcggagg cggcgccggc
     1381 ggaagctggt gatggttacg tcaggaattc gcgtcgttta ccgcacagac gacggttaag
     1441 ttaagctaca tcaaaaggag aatcgaagat gggaaagaaa gttggtctga tcattttggg
     1501 cgtcattgtc gttgtggggc tcattctggc gatatggggg attagcagct acaacgggct
     1561 ggtaacgaag cggcagaatg tcgatgcgca atgggccgag gtgcagaacc agatgcagcg
     1621 ccgggctgac ttgattccga atattgtcgc cacggtgaag ggcatcgccg gtctggaaga
     1681 gcgagtcttc acgcgaatcg ccgaagcgcg cgcgaatctg ctctcaacga ttcagaatcc
     1741 gaacgccaca acggaacaga agatcgccgc cgatcaaaac ctgaccgggg cgatgcgcga
     1801 cgggggtttg ttaggcagcg gtgggcgctt cctgatgatc accgaaaatt atccgcaact
     1861 gaaatcgaac gaaaattttc ttcgactaca ggatgaattg gccgggaccg agaaccgtct
     1921 ggcgacatcc cgacgcgact acaccctggc agcgcaggat tacaacacat cgcgaagcag
     1981 atttccgacg gtgctcatcg ccgggctact tggatttccg gcgcagccgt atttccaagc
     2041 cgatccgggt gcccagaaag cgccaacagt tgatttcggt aagtaagaaa caacttcaag
     2101 atgtttggcg gcgagctact gctcgccgtc atagtcgggc gcggctggac tctaagcggt
     2161 gacgaacggc gatgacagac aacaccaaat ccaaagttct tcgacagctg gttgaagctc
     2221 tgctcgccgc gcacggcgag aacctggcct caatcacgtt gtacggctca actgcggtcg
     2281 aaaatacaac cgacgaccag gcacatcaca acgttctggt ggtgctgcgc cgaatcgctt
     2341 tggaagacct gcggctttcg gttgagcctt tacgcgtttg gacaaaagcc agccagccga
     2401 tgcccgttta tttctcgctc gatgaactgc aacgcgcggc cgacgttttt ccaattgagt
     2461 ttctgcaaat gcagaagg
//
LOCUS       DATDBY010000419         2010 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1647936, whole genome shotgun sequence.
ACCESSION   DATDBY010000419 DATDBY010000000
VERSION     DATDBY010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1647936"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2010)
                     /locus_tag="VIT19_07910"
     CDS             complement(<1..>2010)
                     /locus_tag="VIT19_07910"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEY5838945.1"
                     /translation="FVERVWKWKEEYGGQILNQIRREGASVDWSRFKFTMDEDLSRAV
                     REVFVRLYEEGLIYRGNRIVNWCPNDQTVLSDLEVQRDPQKGKLYYLRYPFKNREGAI
                     VVATTRPETMLGDTAVAVNPNDERYSAVVGETLILPIVSREISVVADEFVESEFGTGA
                     VKVTPAHDAADYEMGIRHGLEQVNVIDRFARMTEEAGADFAGLDRYKARELVIEKLEA
                     LGALEKTVDYEFSISKCERCKTVIEPLISTQWFCRMEPLRDLALAELRENRKPQFVPQ
                     VPYEKVYVDWLENLRDWTISRQLWWGHQIPAWYTNDGEVIVARSREEAEAKAGTNELT
                     QDEDVLDTWFSSALWPFSTLGWPDETADLKTFYPTSVLVTARDIIFLWVSRMMMMGLK
                     FIGEEAFHDVYVTGTVLDKHGQRMSKTKANGIDPLEVFDKYGVDATRLALAQIGSTDT
                     RWNEKQVESYRNFANKIWNAARFCLMNAEGAESVAEPFAAERSALPLHDRWILSRLNR
                     TAAAVNKQLETYDFHAAVQALYHFFWDDFCDWYIELSKTNVTAEEASVQRDVARARLI
                     SILEQALRLLHPFMPYLTEELWQKLPVNHARLQHSAYAGAEPSIMLASFPRGDASQID
                     ERAEADMQAVIDLISRVRNIRSEMNIKQSDRIQLMIAAKSDLKTV"
BASE COUNT          446 a          617 c          498 g          449 t
ORIGIN      
        1 aacactgtct tcaagtctga tttcgccgca atcatcaact ggattcgatc gctctgcttg
       61 atgttcatct cggaacggat gttccgcacg cgcgaaataa gatcgatcac cgcctgcata
      121 tcagcttccg cgcgttcatc gatctgcgac gcgtctccgc gcggaaatga cgccagcatg
      181 atactcggtt cggcgccggc gtacgcggaa tgctgtagcc gtgcatgatt caccggcagc
      241 ttctgccaaa gttcctcagt caggtacggc atgaacggat gcaacagccg cagtgcctgt
      301 tccagaatcg aaataagccg cgcgcgcgct acgtcgcgtt ggacggacgc ttcttctgcc
      361 gtcacattcg tcttcgaaag ctcgatatac caatcgcaga aatcgtccca gaaaaagtga
      421 taaagcgcct gcaccgccgc gtgaaagtcg taggtctcga gttgcttgtt caccgccgcg
      481 gcagtccggt tcagccgcga aagaatccat cgatcgtgca gtggcaaagc tgatcgttca
      541 gccgcgaaag gctccgccac tgattccgcg ccttcggcat tcatcaaaca gaaccgtgcg
      601 gcattccaaa tcttgttagc gaagttgcga taagactcaa cctgcttttc gttccaacgt
      661 gtatcggtcg agccaatctg cgccagcgcc agccgcgtcg cgtccactcc atacttgtcg
      721 aacacttcca gcggatcgat gccgttagct ttagtcttcg acatgcgctg gccgtgcttg
      781 tctaaaaccg tgccggtgac atagacatca tggaacgctt cttcgccgat gaacttcaga
      841 cccatcatca tcatccgcga cacccaaagg aaaatgatgt cgcgcgccgt cacgagcacc
      901 gaggtgggat aaaacgtctt caggtccgcc gtctcgtccg gccaaccgag cgtcgaaaaa
      961 ggccacagcg ccgatgaaaa ccaggtgtcg agcacgtctt catcctgagt cagctcattc
     1021 gtgccggcct tggcttcggc ctcttcacgc gagcgcgcaa cgatcacttc gccgtcgttc
     1081 gtgtaccacg ccggaatctg atgaccccac caaagctgcc gcgagatcgt ccaatcacgg
     1141 agattctcga gccaatcaac gtaaactttt tcgtaaggaa cctgcggcac aaactgtggc
     1201 tttcggttct cgcgaagctc tgccagggcg agatctcgca aaggttccat gcggcagaac
     1261 cactgcgtgg aaatcaaagg ttcgataacc gtcttgcagc gctcgcactt ggaaatcgag
     1321 aattcgtaat cgaccgtttt ctccaacgcc ccgagcgctt caagtttctc aatcacgagt
     1381 tcgcgcgctt tgtatcgatc aagaccagcg aaatcagcgc cggcttcttc agtcattcgc
     1441 gcaaagcgat cgatgacgtt tacctgctcg agaccgtgac gaatgcccat ttcgtaatcg
     1501 gctgcgtcgt gggcaggcgt gacttttacc gcgccggtgc cgaattccga ttcgacgaat
     1561 tcgtcggcga caacagaaat ctcacggctc acgatgggca gaatgagagt ctcgccaacg
     1621 accgcgctgt agcgctcgtc gttaggatta acggccaccg cggtgtcgcc cagcatcgtt
     1681 tccggacgcg tggtcgctac gacgatcgca ccttcccggt tcttaaacgg ataccgcagg
     1741 taatacagtt ttcctttttg cggatcacgc tgcacttcca aatccgaaag caccgtctga
     1801 tcgttcgggc accagttcac gatccgattg ccgcgataaa tcaatccttc ttcgtacagc
     1861 cgcacgaaaa cttcgcgcac tgcgcgcgaa aggtcctcgt ccatcgtgaa cttgaatcgc
     1921 gaccaatcaa ctgacgcgcc ttctcgcctt atttgattga gaatctgccc gccgtattct
     1981 tctttccatt tccaaacacg ctcgacgaac
//
LOCUS       DATDBY010000420         2814 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2899895, whole genome shotgun sequence.
ACCESSION   DATDBY010000420 DATDBY010000000
VERSION     DATDBY010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2814
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2899895"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1054
                     /locus_tag="VIT19_07915"
     CDS             <1..1054
                     /locus_tag="VIT19_07915"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY5838946.1"
                     /translation="AGPLSRPASLPGARVFWIVFDELDYARVFVTRPDGLDLPEFDRL
                     RREAVFAENALPPSNNTLFTIPSLISGQQIEWALAVRPNELLVKAKGSTDKVAWSTLP
                     NVFAEARAAGVDTAIAGWYHPYCRVIGASLSNCLWDSVIVNEISPLRGRPTIWKSMAY
                     WATITLFRIPGAFRMLGHWYESGRRHDHIEDQSKIMERARAIAKQRAFGLTFLHFPIP
                     HPPFIYDRAARTLSAQTANTYADNLALADRTLGELRREMEAADLWDDTAVIVTSDHWW
                     RTPSDGHIDERVPFIVKLPGQREGSSYATAFNTVVTRALILALLRGEVTDAPGLARWL
                     DQNRSDAQPIGGINVR"
     gene            complement(1242..2300)
                     /locus_tag="VIT19_07920"
     CDS             complement(1242..2300)
                     /locus_tag="VIT19_07920"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY5838947.1"
                     /translation="MTAILSEQMTTVGVIGCGYWGPNLLRNFAENEAAQLVWICDTDE
                     SRVAAMGRRYPAARTTTDYRNLLVDSELDAVAVVTPVATHYQIAKEALLAGKHVLVEK
                     PLTATVGEAEGLIELAKQKRLTLMVDHTFVYTGAVRKMKEILNGGEFGELLYFDSVRI
                     NLGLFQRDINVLWDLAPHDLSIMDYLIERQPIGVSALGSCHIEPGIENIAYLVMKFAD
                     DFIAHFHFNWLAPVKIRRTLIAGARKMILYDDIEPTEKVRVYDKGVTANRIGDREADY
                     QTLVSYRTGDVWAPKLDATEALHHVVAEFLDSIRSGRRPLTDGEAGLRVVKILDAAQQ
                     SIKESGNFKLLGAAAAMP"
     gene            complement(2362..>2814)
                     /locus_tag="VIT19_07925"
     CDS             complement(2362..>2814)
                     /locus_tag="VIT19_07925"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5838948.1"
                     /translation="EKALARFWEKAPHLKVYGIDISASRGIEILANIKDLPVDSNSVD
                     LVWCHHVLEHINDDRAAIRELHRVLRPGSGELIVSVPMALGTTTNEYGYPDPMQSGHW
                     RMYGDDFEERLEQAGLIVQRMNFRLAEEEYRRYAFQPERFYVCKKMGD"
BASE COUNT          583 a          848 c          758 g          625 t
ORIGIN      
        1 ggccggccct ctttcgcggc cggcgagttt gcctggcgcc cgtgtctttt ggatagtttt
       61 tgacgaattg gattatgctc gggtcttcgt gacgcggccc gatgggcttg acctgccgga
      121 gtttgaccgt ttgcgccgcg aagccgtctt cgccgaaaac gccctgccgc cttcgaacaa
      181 cacgctcttt acgataccgt cgctcatcag tggccaacaa atcgaatggg ccttggccgt
      241 gcgcccgaac gagcttttgg tgaaagccaa agggagcact gacaaagttg catggagcac
      301 gctgccgaat gtctttgctg aagcgcgcgc ggccggagtc gacacggcaa tcgctggttg
      361 gtatcaccct tactgccgcg tgatcggcgc cagtctctct aactgtctct gggattcggt
      421 gatcgttaat gagatcagcc ctttgcgcgg caggccgacg atttggaaga gcatggccta
      481 ctgggccacc ataaccttgt tcagaatccc cggcgcgttc cgcatgctcg gtcattggta
      541 cgagagcggc cgccgtcatg atcacatcga ggaccaatcg aaaatcatgg agcgggcgcg
      601 cgccatcgcc aagcagcgcg ccttcggact cacgttcttg cactttccca tcccgcaccc
      661 cccgttcatc tatgaccgtg cggcccgcac cctctcggcc caaaccgcga acacctacgc
      721 cgataacctc gcgctggcag accgcacgct cggcgagctg cggcgcgaga tggaggctgc
      781 ggacctgtgg gacgataccg ccgtcatcgt cacctccgat cactggtggc gtacgccgtc
      841 tgacggccac attgacgagc gcgtcccctt tattgtcaaa ctccccggcc aacgggaagg
      901 ctcgtcctac gcgaccgcct tcaacaccgt agtgacgcgc gcgctaattc tcgccttgtt
      961 gcgcggcgaa gtgacagacg cgccgggtct cgcgcgttgg ctggaccaga accgctccga
     1021 tgcgcagccc atcggcggca tcaatgtgcg ttgaggacat gagatgatga atcgtggtca
     1081 cgcctaaaca ttccgctccg tcccggccaa tattgtcctc gtgcctgcca acgaaacgaa
     1141 gctttgattc tgcttaagcc ctgaattttt tctggaacca ggcaaccgcg aaacaataat
     1201 gccggcgcgc ttgtaggagt ctccggaggc tggcgaatta gctagggcat cgcggcggcg
     1261 gcgcccagca gcttgaagtt tccgctttcc ttaatcgact gctgcgcggc gtcgaggatt
     1321 ttgacaaccc gcaaacccgc ctcaccatcg gtcaaaggcc gtcggccgct ccgaattgaa
     1381 tctagaaact cagcgacgac gtggtgcaga gcttccgtcg cgtcgagctt tggcgcccac
     1441 acgtcgccgg tgcgataact caccagcgtt tgatagtcgg cttcgcgatc gccgatgcgg
     1501 ttcgccgtca cacctttgtc gtaaacgcgc accttctcag tcggttcaat gtcgtcgtaa
     1561 agaatcattt tccgagcgcc cgcgatcaag gtgcggcgaa tcttcaccgg cgccagccag
     1621 ttgaaatgaa agtgcgcgat gaagtcgtct gcgaacttca tgacgagata agcgatattt
     1681 tcgatgcccg gttcgatgtg acaactgccg agcgcgctga cgccgatcgg ttggcgctcg
     1741 atcaaataat ccatgattga aagatcgtgt ggggccaggt cccagagtac gttgatgtcg
     1801 cgctgaaaca atcccagatt gatgcgcacc gaatcgaagt agagcaactc gccgaattca
     1861 ccgccgttga gaatctcttt catcttgcgc acggcgcccg tgtaaacgaa ggtgtgatcg
     1921 accatcaacg tcagccgctt ttgtttcgca agttcgatca atccttcggc ttcgcccacg
     1981 gtggcagtca gaggcttttc gaccagtaca tgtttgccgg caagcagagc ttctttcgcg
     2041 atttggtaat gcgtggcgac cggggtgacg actgcgaccg cgtccagctc agaatcgacg
     2101 agcaagtttc gatagtcagt ggttgtgcgc gccgcaggat aacgccggcc catcgcggca
     2161 actcgacttt cgtctgtgtc acaaatccaa actagctgcg ctgcctcgtt ctcggcaaag
     2221 ttgcgcagca gattcggccc ccaatatccg cagccaatca cgccgacagt cgtcatttgt
     2281 tcggagagga tagcggtcat tggaacaaaa gtgaataacg cctactgttg cagttggttg
     2341 cctgttggaa tgattgcccg gttaatcgcc cattttctta caaacataga atcgttccgg
     2401 ctgaaaagca taacgccggt attcttcttc agcgagccga aagttcatcc tttgcacgat
     2461 taacccggct tgctccagcc gctcctcaaa gtcatcgccg tacatacgcc agtgtccaga
     2521 ctgcatagga tcaggataac catattcatt tgtcgttgtc cctaacgcca tcggtactga
     2581 aacaatcaat tcacccgatc caggccgcag aactcgatgc agttctcgaa tcgctgcgcg
     2641 gtcatcgttt atgtgttcaa gcacatggtg acaccacacc aggtcgactg aatttgagtc
     2701 aacaggcaga tccttaatgt tcgcgagaat ctctatgccg cgcgacgcgc ttatatcgat
     2761 cccataaacc tttagatgcg gcgccttctc ccagaagcgc gctaaggcct tctc
//
LOCUS       DATDBY010000421         2798 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_278957, whole genome shotgun sequence.
ACCESSION   DATDBY010000421 DATDBY010000000
VERSION     DATDBY010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278957"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..354)
                     /locus_tag="VIT19_07930"
     CDS             complement(<1..354)
                     /locus_tag="VIT19_07930"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY5838949.1"
                     /translation="MTERIFNFSAGPAIIPVPVLEEAQRDMLSLPGVGMSVMEISHRS
                     KTFDEIIDGAEKGLRALLNIPKDYAVLFLQGGASLQFTMVPMNFLSLDGSADYVVTGS
                     WGQKAVKEAQIFGSVD"
     gene            complement(446..1879)
                     /gene="purF"
                     /locus_tag="VIT19_07935"
     CDS             complement(446..1879)
                     /gene="purF"
                     /locus_tag="VIT19_07935"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR01134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEY5838950.1"
                     /translation="MKNILDDKLREECGVFGIYGHADAARLTYLGLYALQHRGQESCG
                     IVTSDGAQLITERAMGHVRDSFDEQRLDRLRGHNAIGHVRYSTAGEVSIRECQPFSVV
                     CQHGPIAICHNGNLPFAGEDRKELEKEGAIFSSTSDTEVVLHQVARSRAANFVEAIPE
                     VLHETEGAFSMLFLTPKELIAIRDPRGFRPLALGRLDDAWVVASETCAFDLIDAKYVR
                     DVEPGEMIVVNEEGLRSSHQLKPEQHSMCVFEHVYFARPDSIIFGQSVNRSRHKMGQR
                     LAVEQPADADIVVPVPDSGVAAAIGYSAESGLPFRLGLVRNHYVGRTFIEPKQSIRSF
                     GVRIKLNPVRHLIENKRIVLIDDSIVRGTTSKKIVRMVREAGAKEIHVRISCPPTISP
                     CYYGVDTPNKSELIAANYSIEGIRDFIEADSLGYLSLEGMLSSTGLKPDESCVACWNE
                     KYPTRITREAETMHARDEMAARIAVEL"
     gene            2017..2379
                     /locus_tag="VIT19_07940"
     CDS             2017..2379
                     /locus_tag="VIT19_07940"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY5838951.1"
                     /translation="MNRAPRRFLLFIFTVAAAAGLSLFTVFGAGNTKEAALADAGTIY
                     SRHCVSCHGRDGRGRTRKGRQTHARDMTSASWQDDISDERLFNSISNGRGKMPSFHKK
                     ISENDIDALVAYVRRMRR"
     gene            2379..>2798
                     /locus_tag="VIT19_07945"
     CDS             2379..>2798
                     /locus_tag="VIT19_07945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838952.1"
                     /translation="MSSTTESSFWERGHLARIRSGFPLLALRVLLGVALIGALLFAGW
                     RIYRRLPAESPNQTVFADGRTRQALRLVVRNKIAGATLRSPLEFFHFNLAAARREYEA
                     SPRLARQFDDFLMRRMHDVTPVKADVTGDGYAVAQLWS"
BASE COUNT          554 a          834 c          801 g          609 t
ORIGIN      
        1 gtcaacgctg ccgaaaatct gcgcttcctt aaccgccttc tggccccagc ttccggtgac
       61 gacgtaatcc gcgctgccgt cgagcgaaag aaaattcatc ggcaccattg tgaactgcaa
      121 actcgcgccg ccttgcagga agagcaccgc gtaatctttc ggaatgttca ggagcgcgcg
      181 caggcctttc tcggcgccgt cgatgatctc gtcgaacgtt ttcgagcgat gactaatctc
      241 catcacggac atgccgacac ccggcagcga taacatgtcc cgttgcgctt cttccaaaac
      301 cgggaccgga atgatggccg gcccggcgct aaagttaaag attctttcag tcatcgtttc
      361 ctttgtcggc gtcagagtac caacttcagt tgggtttttg ctttggaaga tagccgacta
      421 aagtcggtac tctaacgcaa gctatctaca attccaccgc gatgcgggcg gccatctcgt
      481 cgcgcgcgtg catcgtctcg gcttcgcgcg taatgcgggt tgggtatttt tcgttccagc
      541 aggcgacgca ggactcgtcc ggcttgagtc ccgtcgaact caacattcct tccaacgaca
      601 gatagccgag cgaatccgct tcgataaagt cgcgaatgcc ttcgatcgaa tagttcgccg
      661 caatcagttc ggatttgttc ggcgtatcga cgccgtagta acacgggctg attgtcggcg
      721 gacaggaaat ccgcacgtga atttccttcg cccctgcttc gcgcaccatg cgcacgattt
      781 ttttcgaagt cgtgccccgc acgattgaat cgtcaatcag gactatgcgt ttgttctcga
      841 ttaggtgacg taccggattc agcttgatgc gtacgccaaa gctgcgaatc gattgcttcg
      901 gttcgatgaa cgtgcggcca acgtagtgat tgcggaccaa acccagtcga aacggcaggc
      961 cactctctgc cgaatatcca attgcggcgg ccacgcctga atcgggtacc gggaccacga
     1021 tgtccgcgtc cgcgggctgt tcgaccgcca ggcgctggcc catcttgtga cgcgagcgat
     1081 ttactgattg gccgaagatg atcgaatccg gccgcgcaaa ataaacgtgc tcaaaaacgc
     1141 acatcgaatg ttgttcaggc ttgagctggt gcgacgagcg caaaccttct tcgttgacta
     1201 cgatcatctc gcccggctcg acatcgcgca cgtacttcgc atcgattaga tcgaaagcgc
     1261 aggtttcaga cgcgactacc caggcgtcgt ccagacgccc gagcgctaac ggtcggaagc
     1321 cgcgcgggtc ccgaatcgcg atcaactctt tcggggttag aaagagcatc gagaaagcac
     1381 cttccgtttc gtgcagtact tccgggatcg cttcaacgaa gtttgccgcg cgcgagcggg
     1441 ccacctgatg cagaacaact tcggtgtccg aggtcgaaga aaaaatcgcg ccttccttct
     1501 ccagttcttt tcggtcttcg ccggcgaatg gcaggttgcc gttgtggcag atggcgattg
     1561 gcccgtgctg gcagacgacg gaaaacggct ggcactcgcg aatcgaaact tctccggccg
     1621 tcgaataacg cacgtggccg atcgcgttgt gccccctcag tcgatcgagc cgctgttcgt
     1681 caaagctgtc gcgtacgtgg cccatcgcgc gttcggtaat gagttgcgcg ccatcagacg
     1741 tgacgatgcc gcacgattcc tggccgcgat gctggagcgc gtacaaaccg agatacgtca
     1801 ggcgcgccgc gtccgcgtgc ccgtagatgc caaagacgcc gcactcttcg cgcagcttgt
     1861 cgtccaaaat gtttttcacg aactgtgaag attatcgcgc ctgcgcgcgg ctttcaaccc
     1921 agacctgccg gggccgcgca cgcgacaaac gaaatgaatt ggagttataa ctattcgcgc
     1981 tcacagcgcg atccgattgg ttcttccgga ggccgaatga acagagcacc tcgacgcttc
     2041 ctgcttttca tttttaccgt tgccgcggcg gccggtcttt cacttttcac cgtttttggc
     2101 gcgggaaata caaaggaagc tgccctcgct gatgccggaa cgatctacag ccggcattgc
     2161 gtgtcgtgtc acgggcgcga tggccgcggg cgcacgcgca agggacggca gactcacgcg
     2221 cgcgacatga ccagcgcgtc gtggcaggac gatatcagcg acgagcggct attcaattca
     2281 atcagcaacg gccgcggcaa gatgccgtcg ttccacaaga agatctctga gaatgatatc
     2341 gatgcgctgg ttgcctacgt tcgccggatg agaaggtgat gagtagtacc accgaatctt
     2401 ccttttggga gcgcgggcat cttgcccgca tccggtccgg ctttccgttg ctcgccttgc
     2461 gcgtgctgct gggcgtcgcg ctgattggcg cgttgctgtt cgccggttgg agaatctacc
     2521 gccgcctgcc ggccgaaagc ccgaaccaga cagtcttcgc tgacggccgc acgcgccagg
     2581 ctttgcgact ggtggtgcgg aacaagatcg ccggggctac tctgcgttcg ccgctcgagt
     2641 tctttcattt caatctggcc gccgcgcgtc gtgaatacga agcgtcgccc cggctggcga
     2701 gacagttcga tgactttctg atgcgccgca tgcacgatgt aacgccggtg aaggccgatg
     2761 tcaccggtga cggctacgcc gtggcgcagc tttggtca
//
LOCUS       DATDBY010000422         3226 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_844140, whole genome shotgun sequence.
ACCESSION   DATDBY010000422 DATDBY010000000
VERSION     DATDBY010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3226
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_844140"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1272
                     /locus_tag="VIT19_07950"
     CDS             <1..1272
                     /locus_tag="VIT19_07950"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5838953.1"
                     /translation="RGGLLPAFLCAYLSQLLYLFAVQWLSGDRAFLTRPSGIFVNLFH
                     AATALLPIAIVVVPIILLIVNLFDRRGSFSVVLQQEYASLATVILYVIIGCNIAGIAI
                     GVFLHFSGTQAAYVAHFAQRIPEVLDQWRSLGVSEQNLVQMEAQLKNPALVVGAMFFG
                     MKLTLFAISATLAVREVFRLSALRSAAVVFISGSIVLLTAQVWTLLFTTVVGSPFILL
                     ILFFLLRGYFGSVVSTQRARGAFKQNLEAATINPRDSSAHYNLALIHQTRGELDQARE
                     RFQRAIDIDPDETDAHYQLGRIARSQNRLAEAIGHFEQVVQRDQYHAQNEIWREIGAT
                     YIAAGQFADARDALQKFLERRENDPQGLYLMGRAYAGLGDQQEAASSMQACIDAVKTA
                     PAYKYRAEKRWLHEAQQFLKGKKREAVSSER"
     gene            1476..2324
                     /locus_tag="VIT19_07955"
     CDS             1476..2324
                     /locus_tag="VIT19_07955"
                     /inference="COORDINATES: protein motif:HMM:TIGR00266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00266 family protein"
                     /protein_id="HEY5838954.1"
                     /translation="MNCPNCGAPAVAGGFCGGCGKRVESGQPAQPGTINLDMDGEGAG
                     RGYIYHIEHQPAFSLAVLTLQAEQSIMAEAGAMVSMSANIELQSQMKGGLLGALKRAA
                     GGESAFVSTFTAHGGPGEVTLAPGAPGDIAAIELNNQHFFVQSSSYLAGDSSLNVDTK
                     WGGAKSFFGGEGLFVLMVQGQGLLLVSSFGAIHRKRLQAGERYVVDTGHLVAWEGTTQ
                     YTLRKAAAGFFRSMVSGEGIVAEFTGPGELLIQTRNLAAMAGLLKPFFPSQGSGGSGF
                     NLNLGG"
     gene            2456..2992
                     /locus_tag="VIT19_07960"
     CDS             2456..2992
                     /locus_tag="VIT19_07960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838955.1"
                     /translation="MKSLSTLAIVGLLFFACKLCSFSDNTNRPNSNSSPSSPSTMYAR
                     EFIKPELGRFTRSKSYTKEELNKTASGFTVKMLAESGDCAGGEYSGGSGTAALMACSY
                     SRSSVPAGLIDDIELEIQNDRGMRLVRAGPKGTGKRVEVTDSQGRSVVAWNNGYWLFM
                     TIGNSRSDTAALADAVGY"
     gene            3030..>3226
                     /locus_tag="VIT19_07965"
     CDS             3030..>3226
                     /locus_tag="VIT19_07965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012053752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase domain-containing
                     protein"
                     /protein_id="HEY5838956.1"
                     /translation="MVDSSRKAILALEDGRVFRGRSWAAEGESCGEMVFNTSMTGYQE
                     VLTDPSYAGQIVCMTYPLIGN"
BASE COUNT          653 a          887 c          966 g          720 t
ORIGIN      
        1 cgcggcgggc tactgccggc atttctctgc gcttatcttt cgcagcttct ttatctcttc
       61 gcggtgcagt ggctgagcgg tgaccgggct tttcttacac gtccgtcagg cattttcgtc
      121 aacctgttcc atgcggcgac ggcgctgttg ccgatagcga tcgtcgtcgt gccgatcatt
      181 cttctcatcg tcaacttgtt cgatcgccgc ggcagcttca gcgttgttct gcaacaggag
      241 tatgcctcac tggctacggt aatcctttac gtcatcatcg ggtgtaatat tgccggtatc
      301 gccatcggcg tcttcctgca tttcagcggc acccaggccg cttatgttgc ccatttcgcg
      361 caacgtattc cggaagttct ggatcaatgg cgctccctgg gtgtgtcaga acagaatctc
      421 gtgcagatgg aagcgcaact aaagaatccc gcgctcgtgg tcggcgcgat gttctttgga
      481 atgaaactaa cgttatttgc cattagcgcc acgctggcgg tgcgggaagt gtttcggctt
      541 tctgcgctgc gttcggcggc ggtcgtgttt atttcgggct cgattgtttt gctgacggcg
      601 caggtttgga cgctgctgtt tacgaccgtc gtcgggtcgc ccttcattct gctgatactg
      661 ttctttctgc tgcgcggcta tttcggcagt gtcgtcagca cgcagcgtgc ccgcggggcg
      721 ttcaagcaaa acctggaagc agcaacgatc aatccgcgcg attcgtcggc gcactataac
      781 ctcgctttaa ttcatcaaac ccgcggcgag ctggaccagg cgcgcgagcg ctttcaacgc
      841 gcgatcgaca tcgatccgga cgagactgat gcgcattatc agctcggcag gatcgcgcgc
      901 tcacagaatc gtttagcgga agcaattggg cacttcgagc aagtcgtcca gcgcgatcaa
      961 taccacgcgc agaatgaaat ctggcgcgaa attggcgcga cgtacattgc ggccggtcag
     1021 ttcgctgacg cccgcgatgc tttgcagaag tttcttgagc gacgcgagaa tgacccgcag
     1081 ggtctctatc tgatgggccg cgcgtacgcg gggctgggcg accaacagga ggccgcgagc
     1141 tcaatgcagg cttgcattga cgcggtgaaa actgcgccgg catacaaata tcgcgctgag
     1201 aagcgttggc tgcacgaagc gcaacagttt ctgaagggta agaaacgcga agcggttagt
     1261 agcgagcggt aagcggcacg ctcctggcgg tcagcggcaa tagataatct gacatttggg
     1321 atttgagatt tggcatgtgg tgatttgaat tacgtacttg agcgaagctc cgcagaacta
     1381 cgcaagagtt tccgtaatgg aaatgccaaa tgtcagatgt taaatctcaa atgccaaata
     1441 gctctctcat ttctgcctaa caacggatca acactatgaa ctgcccaaat tgtggtgcgc
     1501 ctgccgtggc aggcggtttt tgtgggggtt gcggcaagcg cgtcgaatcc ggtcaaccgg
     1561 cgcaacccgg cacgatcaac ctggacatgg acggcgaggg cgccggccgc ggctacatct
     1621 atcacatcga acaccagccc gcgttttcgc tcgccgtgct gacgctccaa gcggaacagt
     1681 cgatcatggc ggaagccggc gcgatggttt cgatgtcggc aaatatcgag ttgcagtcgc
     1741 agatgaaagg cggcctgctc ggcgccttga agcgagccgc gggcggcgag tcggccttcg
     1801 tctcgacatt tactgcgcac ggtgggccgg gcgaagtcac gctcgcgccc ggcgcgcctg
     1861 gcgacatcgc cgcgatcgag ctgaacaatc aacacttctt cgtgcagtcg agttcttatc
     1921 tcgcgggcga ctcaagtctg aatgtcgata cgaaatgggg cggcgcaaaa tcctttttcg
     1981 gcggtgaagg cttgttcgtc ttgatggtgc agggacaggg tctgctactt gtctcttcat
     2041 tcggcgcaat tcatcgcaag cgtctgcaag ccggcgagcg ttacgtcgtc gacaccgggc
     2101 acctggtcgc ctgggaaggc acgacgcaat acactctgcg caaagccgcg gccggtttct
     2161 ttcgcagcat ggtcagcggt gaaggcatcg tcgcggaatt caccggcccg ggcgaactgc
     2221 tgattcagac acgcaatctc gccgcgatgg cgggattgct gaaaccgttc ttcccctcac
     2281 agggcagcgg cggcagcggc ttcaatctca atctgggcgg ctgatcgcgt cagaagtccg
     2341 accaagcggg gtccccgcgc gagcatctcg cgtgggcgct cgacagggag gtgcacggta
     2401 ttgcagaaac ccgaccgtaa gggagggtgc accgtcacaa agactacggg aaacaatgaa
     2461 atctctttca accctcgcaa tcgtcggtct gcttttcttt gcttgtaagc tgtgtagctt
     2521 ttctgacaac acgaatcggc caaattcgaa ctccagtccc agctcgccat ccacgatgta
     2581 cgcgcgcgag ttcatcaaac cggaactcgg ccgatttacc cgctcaaaga gctacacgaa
     2641 agaagagctc aacaagaccg cctcaggttt caccgtgaag atgctcgcgg agtcgggcga
     2701 ttgcgcaggc ggtgagtact cgggcgggag cggtaccgca gctctgatgg cttgttcgta
     2761 ttcccgatcc tcagttccgg ctgggctgat cgatgacatt gagctagaga tacaaaacga
     2821 tcgagggatg cggctggttc gcgcgggtcc gaaaggcacg ggcaaacggg ttgaagtcac
     2881 cgatagccag ggccgaagcg tggtcgcatg gaataacggt tactggttat tcatgacaat
     2941 tgggaatagc cggtcagaca cggccgctct ggcggacgcg gttggctact agatgtgagt
     3001 taatagattt gtattcctct gagacttctg tggttgattc atcacgaaaa gccattctcg
     3061 cgctcgaaga cggccgcgtc ttccgcgggc gctcgtgggc ggctgaaggc gagtcgtgcg
     3121 gcgagatggt tttcaacact tccatgaccg gttatcagga agtgctgacc gatccgtctt
     3181 acgcgggtca gatcgtctgc atgacctatc cgctgattgg gaacta
//
LOCUS       DATDBY010000423         2753 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1908222, whole genome shotgun sequence.
ACCESSION   DATDBY010000423 DATDBY010000000
VERSION     DATDBY010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1908222"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..748
                     /locus_tag="VIT19_07970"
     CDS             <1..748
                     /locus_tag="VIT19_07970"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF014296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEY5838957.1"
                     /translation="MVQKEIGMEAVLHYCCRDRNLLGMMSDLLGAAAMGLRNLLLITG
                     DPPKMGPYPDATAVFDIDAIGLTNMVNKLNHGLDIGNNPIGEPTAFSIGVGVNPGAVN
                     MDEEMRRFEWKIEAGAEYAITQPVFDTAQLREFLKNIEHCRIPIVAGIWPLVSYRNAE
                     FLHNEVPGVHVTPEIMERMRAASAISKEAGRDEGLKIARESLIEVREFIQGAQVSAPF
                     GNVKYALEVFEVLPDFAVSEARASRAPLGS"
     gene            complement(1089..1979)
                     /locus_tag="VIT19_07975"
     CDS             complement(1089..1979)
                     /locus_tag="VIT19_07975"
                     /inference="COORDINATES: protein motif:HMM:TIGR01777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HEY5838958.1"
                     /translation="MRIAIAGASGLVGSALIPGLESDGHEIVRLVRNTPKAGEIEWHP
                     NQDEIDPATIDGFGAIINLAGESIAEGRWTEEKKKRIRDSRVNGTHLISEAIAKLATK
                     PRVFLCASATGIYGDRGDETLDEQSESGGGFLAGVCREWEKATEPASNAGVRVVNLRF
                     GPILARAGGMLEKMLTPFKMGLGGKIGSGKQHISWVGIEDAVAATKLALNDDSVRGPL
                     NIVSPKPVTNERFTRALGEALSRPTVMSMPAFAARLAFGEMADEMLLVSQRVVPKRLN
                     TAGFQFQNPDLESAIRKYVA"
     gene            2128..>2753
                     /locus_tag="VIT19_07980"
     CDS             2128..>2753
                     /locus_tag="VIT19_07980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838959.1"
                     /translation="MTARPRIVFFSLAAAVAICFACLPSAETQSSLRRITNTTDEGIS
                     INPSISGDGRIIGFESTEDVAGAGGTNYFRAIRANISVDPPTFFQMGRTRAGAPGISQ
                     DGSRIAFASKDDPLGSNADGNSEIFVFNGSNLVQITNTTPGSPANRVTEGNFQPSMSD
                     DGRFVAFSSNRNLTSQNGDGNLEVFVFDSIAAAFTQLTNSTGIVGFSDA"
BASE COUNT          589 a          846 c          733 g          585 t
ORIGIN      
        1 gatggtgcag aaggaaattg gcatggaagc cgtgctgcac tactgctgtc gcgatcgaaa
       61 tttgctcggg atgatgtccg acttgctggg cgccgcggcg atgggcttgc ggaatctgct
      121 tttgattacc ggcgacccgc cgaagatggg cccttatccc gacgcgactg cggtgttcga
      181 catcgacgcg attggcttga cgaacatggt gaacaagctg aatcacggcc tggacatcgg
      241 taacaatcca attggcgagc ccaccgcgtt ctcaattggc gtgggcgtga atcccggcgc
      301 ggtgaatatg gacgaagaga tgcgtcgctt cgaatggaag atcgaagccg gcgccgaata
      361 cgccatcact cagccggtgt tcgacacggc gcagctgcgc gagtttctga agaacatcga
      421 gcactgccgc attccgattg tggccggcat ctggcccctg gtctcttatc gcaacgccga
      481 gttcctgcac aacgaagtgc cgggagtgca cgtcactccc gaaattatgg aacgcatgcg
      541 cgccgcatcg gcaatcagca aggaagccgg acgcgacgaa ggactgaaga tcgcccgcga
      601 atcacttatt gaagtccgcg agttcattca aggcgcacaa gtttcagcgc cgtttggaaa
      661 cgtgaagtac gcgctggaag tttttgaggt cctgccggac tttgccgtgt cagaagcccg
      721 cgcgtcaagg gctccgctgg gcagctagcc tctgtcgtcg tcagttgatt caaacgccga
      781 cacacacaac gctgggagag agttgttgca cagccccgac acgtcttcct cgtcccgtta
      841 gggacgaaat gtttatagcc cgccgacccc aaaaaaaaca cagagcccat ttatgggcga
      901 cactacacct cgctcctccg gagcgaataa ttagatcgag agcaccggtg ctatagacat
      961 ttcgccgctc tgcggcgatc caacagcgtc gccatcactc tcagtactga cttcaacgcc
     1021 tcgatgcccc tgacccttgg tacatgatct tcccagtcac aatcgtgtaa accagactcc
     1081 ggtgccattc acgcaacgta ctttcggatc gcactctcca agtcaggatt ctgaaactga
     1141 aaacctgcgg tattcagtct cttcggcacg acccgctggc tcaccaacaa catctcgtcc
     1201 gccatttcgc caaacgccag tcgcgccgca aaagcgggca tggacatgac cgttgggcgc
     1261 gagagcgctt cgccaagcgc gcgcgtgaat cgctcattcg tgaccggctt aggcgagacg
     1321 atgtttagcg ggccgcggac cgagtcatcg ttcaacgcaa gtttcgtcgc cgcgaccgca
     1381 tcttcaattc cgacccaact tatgtgctgc ttgccggaac cgattttgcc gccgagaccc
     1441 atcttgaaag gcgtcagcat cttttccagc atgccgcctg cacgcgcgag gattgggccg
     1501 aagcggaggt taacgacacg caccccagca ttgcttgcag gttccgtcgc cttttcccat
     1561 tcgcgacaca cgccggcgag aaagccgccg ccggattcgc tctgctcgtc cagagtctca
     1621 tcaccgcggt caccgtaaat cccggtcgct gaagcgcaga gaaaaactcg cggtttcgtc
     1681 gccagcttgg cgatcgcttc acttatcaag tgggtcccat tcacgcggct gtcgcgaatc
     1741 ctctttttct tctcttcagt ccagcggcct tcggcgatgc tctcgccggc gagattgatg
     1801 atcgcgccga aaccatcgat ggtcgccgga tcgatctcat cctggttcgg atgccattcg
     1861 atctcgccgg ctttaggcgt attgcgaacc agacgaacga tctcgtgacc gtcgctttca
     1921 agtcccggaa tcagcgccga accaacaagg ccgcttgcgc ctgcgatggc aattctcatg
     1981 agtctccccg tgtccgaata ttcaaagacg agaagcatcc taactcagcg cgcaaagcca
     2041 cgtcacctga gcccggagcc cgtcgccgca ttacattgta atcgagagaa aaacgtatag
     2101 aattcctccg ctttacccac gcatcttgtg acggctcgcc cccgtattgt cttcttctcg
     2161 ctggccgccg cggtggccat ctgtttcgcg tgcctgcctt cagccgaaac acagtcctct
     2221 cttcgacgca tcaccaacac caccgacgaa ggcatcagca ttaatccgtc gattagcggc
     2281 gatggacgaa ttatcggttt tgaatcgaca gaagacgtcg ccggggccgg tggcacgaac
     2341 tactttcgcg cgattcgcgc aaacatctcg gtcgatccgc ccaccttctt tcagatggga
     2401 agaacgcgcg ccggtgctcc gggtatttcg caggatggat cgcgcatcgc tttcgcttcg
     2461 aaagatgatc cgctgggatc gaacgccgat ggcaactcag agatttttgt tttcaacggc
     2521 tcgaacctgg ttcagatcac caacaccacg ccgggcagtc ctgcgaatcg agtcaccgaa
     2581 ggcaactttc agccttcgat gtccgacgac ggccggttcg tggcgttctc gtccaaccga
     2641 aatctgacat cacaaaacgg cgacggaaat ctcgaggttt ttgtcttcga ttcaatagca
     2701 gccgcgttca cgcaactgac gaactcgacg ggtattgtcg gtttcagcga cgc
//
LOCUS       DATDBY010000424         2361 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_628879, whole genome shotgun sequence.
ACCESSION   DATDBY010000424 DATDBY010000000
VERSION     DATDBY010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628879"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /locus_tag="VIT19_07985"
     CDS             complement(<1..438)
                     /locus_tag="VIT19_07985"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I subunit 1 family protein"
                     /protein_id="HEY5838960.1"
                     /translation="MEDLKHVALLMVGILVAFTVVMTMVAYTVLAERRILGFIQGRLG
                     PNRVGPGGFLQPLADLIKFIFKEDIVPDKSTRFVYFLAPIIATVAALMTMVVYPFGPE
                     VNLPVLGPIRLVIARFDVALLYVLGVTSVGVYGIALAGWSSNNK"
     gene            complement(565..>2361)
                     /locus_tag="VIT19_07990"
     CDS             complement(565..>2361)
                     /locus_tag="VIT19_07990"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY5838961.1"
                     /translation="RVCDEWMGEQAIEAGNRGAHTVIGTYGGWLNCSQCGNCIEVCPT
                     GTLLDGTYRHQARPWELNQNVSTCNFCSDGCQLSIGSRGTEVLRVVARDRYVNGLNGE
                     FLCIKGRFGHPFIDHRERIRTPLIRHQKGGKLIPATWDEALSFTVRRLTEIKQTYGAN
                     SIGVLGSPRLTNEALYALRKLATDAIGTENYGISDAFSLKPFFDNLSGPLATHRDIRY
                     AKTIVLIGGEPEELQPLTGKQIRQAVRNGNAQFILINSIRIRLREQASQFIHLRPGTE
                     DAAVLALANASDELQATRKMDVDAAEIESARKAITDTQGDVVIMFGAELSAAAQAVVA
                     QMPHTLGGEGRRVLLHPLPLYNNSVGALDMMSDGKDGAELLRNESLRAMMLAGTPLTN
                     VTGDAGLIPNCEFIVLSELFLTAAGEYADVVFPAASFAEVDGTFTNNDGFVQRVRKAI
                     EPLHQSKPDWLIAAQLARELGMDFGFEMSASAVFREIGERVPSYSGLRYPLLKDESNP
                     VQVKHAIAAQRDLTDDLATIRAAVEAMDETANKEQLTPEVGHELFKLSTLTEKVPQFH
                     LLAQGNPKPESVLVSPLYQITIDEKLDKRAVA"
BASE COUNT          500 a          684 c          672 g          505 t
ORIGIN      
        1 cttgttgttc gacgaccacc ccgcgagcgc gatgccgtaa acaccgaccg acgtcacgcc
       61 aagcacgtag agcagcgcca catcgaaccg cgcgatgacc aaacgaatcg gtccgagaac
      121 cggaagattg acttcgggtc cgaagggata aacgaccatc gtcatcagcg ccgcgaccgt
      181 ggcgatgatc ggcgcgagga aataaacgaa gcgggtcgat ttgtcgggga cgatgtcttc
      241 tttgaagatg aacttaatca ggtcggcgag cggctggaga aatccgccgg ggccgacgcg
      301 gttaggaccg agacgccctt gaatgaatcc gagtatgcgc cgctcagcga gcaccgtgta
      361 cgccaccatc gtcatcacga cagtgaaggc gaccaggatg ccgaccatta gcagtgcaac
      421 gtgttttaga tcttccattc gagattagta ctttgagctt tgagcttggt gctttgtcgt
      481 ctaggcccag gagcttcgtt cgcgtaaagc gaacctcttt gaacaggcat caaagtacaa
      541 agcacgaagt acaaagaacg attgtcaggc cactgctcgt ttatccaatt tctcgtcgat
      601 cgttatctga tacaacggtg aaaccaaaac actctcgggt ttcggattac cctgggccag
      661 caaatgaaac tgcggcactt tttctgtaag ggtactaagc ttgaacagtt cgtggccgac
      721 ttcgggtgtc agttgctcct tgttagccgt ttcgtccatc gcttcgacag ctgcgcgaat
      781 cgtcgccagg tcgtctgtta gatcgcgctg cgctgcaatc gcgtgcttta cctgaaccgg
      841 attgctttca tccttcaaga gcggataccg cagaccggaa tacgaaggca cgcgctctcc
      901 gatttcccgg aacactgcac tggcagacat ttcaaaaccg aagtccatgc cgagttctct
      961 ggccaactgc gccgcgatca accaatcggg tttcgattga tgaagcggct cgatcgcttt
     1021 gcgcacgcgc tggacgaatc cgtcgttgtt cgtaaacgtg ccgtcaacct cggcaaatga
     1081 agccgccggg aagacgacgt cggcgtattc gccggcggct gtcaggaata attccgagag
     1141 cacaatgaat tcgcagttcg gaataagacc tgcgtccccg gtaacgttcg tcaagggcgt
     1201 gcccgcaagc atcatggcgc gcagcgactc gttacgaagc aattcagcgc cgtctttgcc
     1261 atcgctcatc atgtcgagcg cgccgacgct gttgttgtag agcggcagcg gatgcagcag
     1321 cacacggcgg ccttcaccgc cgagggtatg cggcatttgg gcgacgacag cctgcgccgc
     1381 cgcgctcagt tcggccccga acataatgac aacgtcgccc tgcgtatcag taatcgcttt
     1441 gcgtgcggat tcgatctcgg ccgcatcgac atccatcttg cgtgtcgcct gcagctcatc
     1501 gctcgcgttc gccagggcga gcacggcggc gtcttcggtg ccgggacgga ggtgaatgaa
     1561 ctgcgaagcc tgttcgcgca gacgtatgcg gatgctgttg atgagaatga attgcgcgtt
     1621 gccattacga actgcctggc gaatctgttt tccggtgagc ggttgcaact cttctggctc
     1681 gccgccaatc aacacgatcg ttttcgcgta acgaatgtcg cgatgtgtgg ctaagggccc
     1741 gctgagattg tcgaagaacg gctttaacga aaatgcgtcg gaaattccgt agttctcagt
     1801 tccgattgca tccgtggcca gcttgcggag cgcatagagc gcctcattcg tcagccgcgg
     1861 actgccaagc acaccgatcg aattagctcc gtatgtttgt ttgatttcgg tgaggcgtcg
     1921 caccgtgaag ctcagggctt cgtcccacgt ggctgggatc agctttccgc ctttctggtg
     1981 gcgaatcagc ggcgtgcgaa tgcgttcgcg atgatcgatg aagggatggc cgaagcggcc
     2041 cttgatacag aggaactcgc cgttcaatcc gttcacgtag cggtcgcgcg ccacgacgcg
     2101 cagcacctcg gtcccccgcg agccaatcga caactgacaa ccatcagagc agaagttgca
     2161 cgtcgaaacg ttttggttta actcccacgg ccgcgcctga tgccggtagg ttccgtccag
     2221 cagggtgccc gtcggacaaa cttcaatgca gttgccgcac tgcgaacaat tcagccagcc
     2281 gccgtacgtc ccgataactg tgtgcgcgcc gcgattgccg gcttcgatcg cctgctcgcc
     2341 catccactcg tcacagacgc g
//
LOCUS       DATDBY010000425         6753 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_856996, whole genome shotgun sequence.
ACCESSION   DATDBY010000425 DATDBY010000000
VERSION     DATDBY010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6753
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_856996"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..348
                     /locus_tag="VIT19_07995"
     CDS             <1..348
                     /locus_tag="VIT19_07995"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838962.1"
                     /translation="DIDSTSRHRTPGAASIPILGNLFKRKSVIKSSLEILFFITPKIY
                     RPDYFGRPITNTPQTGPRTTTVPQPVPLGNPGTNTPTPTELQQPRPTSNPSGNQPSGP
                     ALSNGPARPSEQK"
     gene            485..850
                     /locus_tag="VIT19_08000"
     CDS             485..850
                     /locus_tag="VIT19_08000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838963.1"
                     /translation="MLKEALQTIVEKTDGSLGALIMGADGLSVEKFFTEEGSAANLDV
                     AAAEFTSLVRNAMRSGNDLGLGDLHEMVVALGKVTFLMRLFNREYFVCLAMKTEGNLG
                     RARYELRKAELQLATEFAL"
     gene            883..2058
                     /locus_tag="VIT19_08005"
     CDS             883..2058
                     /locus_tag="VIT19_08005"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEY5838964.1"
                     /translation="MKITRLLLISCAFILVATAAVAATLHVKVTEVQSGNTLVASNMS
                     RALKVRLKGIAPPEAGQPFSDVAREHLKMLVLDKAVVLDYTHLSDGYFEAKISLNGID
                     VGSQMLRDGAAWYDPNKAHGLTDADRELYANCEKAARDEKRGLWSDAAAVAPWEFLQA
                     KKTEAAKQEETARKSKRLNFSAHQEKEARKAAANRVLSNKHFGRGDVQPGDIAGNPTI
                     RLLNPNATPGDWIPYRSESPKFSIRVPWNSYAFEFPLLNDELKIVNLNYVVGIDDGAI
                     YTLTWLKGSSLVHAPDKTVADAVMDEWVKGINHYFQSEKLPYTATYSSPRNIRMGTYS
                     GKQYSISADAFMAGYARIFSRRVGDQHEVFALAVFSRTGDESAFDFLNSLKFLEPQK"
     gene            2169..2771
                     /locus_tag="VIT19_08010"
     CDS             2169..2771
                     /locus_tag="VIT19_08010"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEY5838965.1"
                     /translation="MLKVEPVVLEGTHVRLEPLTLAHAEDLAHAAADGELWNSDVTII
                     PKPNGMKAYIEAALKGFALGFELPFAIVRKAGSATQVVGTTRYYEIFSADRKAAIGYT
                     WLGKSAQRTPVNTEAKLLLLTHAFETWKCVRVELITDVLNDQSRAAILRLGAKQEGVL
                     RKHLILPSGRVRDSVVFSIIDSEWLEVKTSLLNRLRPSSP"
     gene            2799..4148
                     /locus_tag="VIT19_08015"
     CDS             2799..4148
                     /locus_tag="VIT19_08015"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY5838966.1"
                     /translation="MFRRILCAVLRLALRIYFRRVEIVGLENVPADKPVIFVLNHPNA
                     LVDPVFLLCLAPRRVSFLAKAPLFRMPVIGSLVRALDSLPAYRQQDAGEDVTRNRETF
                     EAAWKLLSRGGTIGICPEGVSHNEPRLKPLKTGAARIALGAASSGGQLDVKIVPVGLY
                     YTEKTTFRSSALLRFGEPIDVEPVELQPDGAPPREAVYALRKQIEEALRDVMLHAEHD
                     EALALVDRVEQIFSAAELSEHDEEQSLARSLQVRQRLLEGYGILRTHSPKRIAAIDVR
                     VNRLHSELQQAGIDPFDLSLPASAAQTITWLIAQFAISLLLAPFAIVGALLHYPAYRL
                     AGYLARTLSRGEQDVVSTFKIVAALLFFPLTALVAAVVTWVYVGLFAALGALVMVPVC
                     GYVAIRFAEELDRLSGGFQALMLFLLRRRWFLRLLAERAAIRKEILALRDETIPTKA"
     gene            complement(4156..4455)
                     /locus_tag="VIT19_08020"
     CDS             complement(4156..4455)
                     /locus_tag="VIT19_08020"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEY5838967.1"
                     /translation="MTLKIRVNRKSVESMTRQIANQLTNLIGTGAVAVGNMLPSERML
                     ADSLGVARNVVRGSYDYLEKAGLVKREGRAGRRVRSRTSRAKATPKRAKKSAKKR"
     gene            complement(4688..5881)
                     /locus_tag="VIT19_08025"
     CDS             complement(4688..5881)
                     /locus_tag="VIT19_08025"
                     /inference="COORDINATES: protein motif:HMM:NF015535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HEY5838968.1"
                     /translation="MRRFRILLASLPVFLLVLAFVSKQTDAQHDRRPRTREAGIVVGV
                     LSPGSLNAITDVGGVTVGHSTIVRGDNVRTGVTAILPHGGNLFREKVPGAVFIGNAFG
                     KLAGSTQVNELGEIETPIMLTSTLSVPRTADAVIDYMLALPGNEDVQSINPLIGETND
                     GYLNDIRGRHASRDDVFAAIKSARSGPVEEGAVGAGTGTVAFGWKGGIGTASRKLPQN
                     LGGYTVGVLVQSNYGGILTINGAPVGRDLGKYYLKDELEKATAQMNQANTADGSIIIV
                     IATDAPIDHRNLSRLAARSMLGLARTGAAGTNGSGDYAIAFSTAPELRIRNLPNMRLK
                     PTAAQLANEAMSPLFLAVIEATEEAIYNSLFRATTTTGRGRTVEALPINRTLEILRKY
                     NALKR"
     gene            complement(5890..6015)
                     /locus_tag="VIT19_08030"
     CDS             complement(5890..6015)
                     /locus_tag="VIT19_08030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838969.1"
                     /translation="MNSTKIKTWVKRLGFWGFMFFLVKGLLWLLIPAVLAVLAWN"
     gene            complement(6012..>6753)
                     /locus_tag="VIT19_08035"
     CDS             complement(6012..>6753)
                     /locus_tag="VIT19_08035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838970.1"
                     /translation="LLYKFRGRSPLMTDRLEFLLVALISVGGWWLFEFYNAPRFWNSD
                     LELWWHYHNLEPNLWVRRIGYDWAFATIFPAMFATAELFRSTIFARSRLALRLSLSKS
                     AKVLLIIIGAVGAIVPLIILSGWFAPIIWLSFILLLDPLNALRGWPSISGDLARGDWR
                     RLLSLLASGFICGFLWESWNYWALTKWTYTVPYFGEIKIFEMPVLGYLGFPPFAIECW
                     AMYIFVRSLLSPGARTAVTNDDIFLRSQ"
BASE COUNT         1476 a         1935 c         1886 g         1456 t
ORIGIN      
        1 gacatcgaca gcaccagccg acaccggacg cctggcgcgg cttcgattcc gattctcggc
       61 aatctcttca agcgcaagtc cgtgatcaag agttcgctcg agattctctt cttcatcacg
      121 ccgaagattt atcggcctga ctacttcggt cgtccgataa ccaacacgcc gcagacgggt
      181 ccgcgcacga ccaccgtgcc gcagcccgtg ccgcttggca atccgggtac gaacactccg
      241 actccgaccg agttgcagca acccaggccc acttcgaacc cgtcggggaa tcagccgtcc
      301 ggcccggccc tttcgaacgg cccggctcgg ccgagcgaac agaagtagca ggggttatcc
      361 agtagccagc gagacagccg tgaactttga agctgtttga agctgccaat tccgccggtg
      421 gtcgaagcga aagcatagac caccggaatt ttttcaggta gattcgctca aatagccaca
      481 cgcgatgtta aaagaagccc ttcagacgat cgtggaaaaa accgatggca gcctcggcgc
      541 gttgatcatg ggcgctgatg gtttgtcggt ggagaagttt ttcacggaag aaggtagcgc
      601 cgcgaacctt gacgtcgcgg ccgctgagtt cacttccctg gtgcgcaatg cgatgcgatc
      661 ggggaacgat ctcggtctcg gcgatcttca cgagatggta gtcgcccttg gcaaagtcac
      721 tttcctcatg cgcctcttca atcgcgaata tttcgtctgt ctcgcgatga agaccgaagg
      781 caatcttggc cgcgcccgtt atgaattgcg gaaggccgaa ttacaactag ccacggaatt
      841 cgccctctaa acccacccac attcactcgt tgaggtgatt caatgaagat cactcgtctt
      901 ttgctcatca gctgcgcgtt cattttggtt gcgaccgccg ccgtcgccgc gacacttcac
      961 gtgaaagtca ctgaagttca gtcaggcaat accctggtcg ccagcaacat gagccgtgct
     1021 ttgaaggtcc gtctcaaggg gattgcgccg cccgaagccg gccaaccgtt cagcgatgtc
     1081 gcgcgcgagc acttgaagat gctggtgctg gacaaggcgg tggtgctgga ctacacgcat
     1141 ctgtcggatg ggtatttcga agctaagatt tcgctcaatg gaattgacgt tggatcgcag
     1201 atgctgcgtg acggcgccgc ctggtacgat cccaataaag cgcacggact gaccgacgcc
     1261 gaccgcgagc tttacgcgaa ctgcgaaaaa gcagcgcgcg acgaaaagcg cgggctgtgg
     1321 agtgatgcag ccgcggttgc accctgggaa tttcttcaag cgaaaaaaac cgaggccgcg
     1381 aagcaagagg agacggcgag aaagtccaaa cggcttaatt tttcggccca tcaggaaaaa
     1441 gaagccagga aagccgctgc taaccgagtg cttagcaata agcacttcgg tcgcggagat
     1501 gtgcagcctg gcgatatcgc cggcaatccg acgatcagac ttttgaaccc gaacgcgacc
     1561 ccgggagatt ggatacccta ccgctccgag tctccgaaat tttcgatccg tgtgccctgg
     1621 aacagctacg ccttcgagtt tccgctcctc aacgacgaac tgaagattgt gaaccttaac
     1681 tacgtggttg ggatcgacga cggcgcgatc tacacgctca cgtggctcaa gggctcaagc
     1741 ctcgttcatg ctcctgacaa gacggttgct gacgcggtga tggatgaatg ggtgaaaggc
     1801 atcaatcatt actttcaaag tgaaaagctg ccctacacgg ccacctacag ttcaccgcga
     1861 aatattcgga tgggcaccta ttccggaaaa caatattcga tatcggcgga cgcgttcatg
     1921 gccggttatg cgcgcatttt ctcgcggcgc gtaggcgatc agcacgaggt attcgcgctg
     1981 gcagttttca gtcgtaccgg cgacgagtcc gcattcgact tcctgaactc actgaagttc
     2041 ctggaaccac agaaatagca ggactctcag tcttgtaata aagcggctcc tgaatttcgg
     2101 gggccgcttt cgtttgttcc acgcttgtca cgcgaagcat cagccgttat aaccacgacg
     2161 tgaccgcaat gctgaaagtt gagccagtcg ttctggaagg cacgcacgtg cgactcgagc
     2221 cgttgaccct cgcgcatgca gaggatctcg cgcacgcagc ggcggacgga gaactctgga
     2281 acagcgacgt aacaataatt ccgaaaccca atggcatgaa ggcttacatt gaagccgcac
     2341 tgaaaggctt cgcgttgggc ttcgagctgc cgttcgcaat cgtccgaaag gcaggttcag
     2401 cgactcaggt agtgggcacg acccgctact atgagatctt ttccgccgac cgaaaagcgg
     2461 caatcggcta cacctggctg ggcaagagcg ctcaacgtac acccgtaaat acagaagcca
     2521 agctgctgtt gctcacgcac gcattcgaaa cgtggaagtg tgtccgggtt gaactgatta
     2581 ccgacgttct taacgatcag tcgcgcgcgg cgattctgcg tctgggagct aaacaggaag
     2641 gcgttctgcg caagcatctc attctgccca gcggacgcgt ccgcgactca gtggttttca
     2701 gcatcatcga ttctgaatgg ctcgaggtta agacaagtct gcttaacaga cttcgtccat
     2761 cctcgccata ggccattccg ccccttttcc gaaacgcaat gtttaggcga attctctgtg
     2821 ctgtcctaag acttgccctg cgcatttact ttcggcgcgt ggaaatcgtc ggccttgaaa
     2881 acgtccccgc tgacaagccc gtcatctttg tcttgaatca tcctaacgcg ctggtggatc
     2941 cggttttcct tctctgcctg gcgccgcgac gggtttcgtt tcttgcgaaa gcgcctctgt
     3001 tccggatgcc tgtgattggt tctctggtgc gagcgctcga ttctctgccc gcatatcgac
     3061 agcaagacgc aggcgaggac gtgacgcgga atcgcgaaac attcgaggcc gcctggaagc
     3121 tcctctcgcg cggtggaact atcggtattt gtcctgaagg agtttcgcac aacgagcccc
     3181 gattgaaacc attgaagacc ggcgcggcga ggatcgcctt gggcgcagcg tccagcggtg
     3241 gtcaactcga tgtaaagatt gtgccggttg gtttgtatta cacggaaaag acgacgttcc
     3301 gcagctctgc gctgttgcgc tttggcgaac caattgacgt cgaaccggtt gagttgcaac
     3361 ccgacggggc gccgccacgc gaagcggtct atgcgctgcg caaacaaatc gaggaggcgc
     3421 tgcgcgatgt gatgttgcac gctgaacacg acgaagcgct ggcgttggtc gaccgagtag
     3481 aacaaatttt ttcggccgcc gagttgagcg agcacgacga ggagcaaagc ctggcaaggt
     3541 cgcttcaggt gcggcaacgt ctcctcgaag gctatggcat tctccggacc cactcgccga
     3601 aacgcatcgc ggcgatcgac gtgcgcgtca atcgcttgca ctcagagctg cagcaggccg
     3661 gcatcgatcc tttcgatctc tcgctgccag catcggcagc ccagacgatt acctggctga
     3721 ttgcgcaatt cgcgatttct ctgttgctgg cgccatttgc gattgtcggt gcgttgctgc
     3781 actacccggc atatcgcctg gccggttatc tggcgcgaac cctttcacgc ggcgagcagg
     3841 acgtcgtctc gactttcaag attgttgcgg cgctgctgtt ctttccccta acggcgctcg
     3901 tggcggccgt tgttacgtgg gtatatgtgg gtttgtttgc ggcgttggga gcgctggtta
     3961 tggttcctgt ttgcggctat gtggccattc gcttcgcaga ggaactcgat cgattaagcg
     4021 gcggttttca ggccttaatg ctcttcctgc ttcgccggcg ttggttcctg aggttgttag
     4081 ccgagcgggc ggcaattcga aaagagatcc tggcgctccg tgacgaaaca attcccacga
     4141 aggcttgata gccgattatc gtttcttggc tgatttcttt gcgcgtttcg gagtggcttt
     4201 ggcgcgactt gtcctggaac gtacccgccg gccggcgcgg ccttcgcgct tcaccagtcc
     4261 agccttttcc aaatagtcgt agctgccccg cacaacgttc cgggcgactc ccagcgagtc
     4321 ggcgagcatg cgttcgctgg gaagcatatt tcccaccgcg accgcgccgg tgccgatgag
     4381 gttagtgagt tgattcgcga tttgtcgcgt catcgattcg acactcttcc tgttgacacg
     4441 aattttgaga gtcacgtccg ttctcctcct gaagtgatta gtgtggggcg cgtattctag
     4501 agagtagttc ggggagtgtc aacgcatctt attcatacct cgcttcagcg aggtgccggg
     4561 ctctcgagcc aacacaagct agccgtttca acggcttgcg gaaatggaaa ccgttgaaac
     4621 ggtttcgcca tctgcttgct ctgattcacc tcgctgaagc gaggtgtgaa tgagaaatcg
     4681 gtcttcgtca acgcttgagt gcgttgtatt tccgcagaat ttcgagcgtg cgattgattg
     4741 gcaatgcctc aactgttcgg ccccggccag ttgtcgtcgt ggcgcgaaat agcgagttgt
     4801 agattgcttc ctctgtagcc tcgatcaccg caagaaagag tggtgacatg gcttcgttgg
     4861 ctaattgcgc tgcggttggt ttgagccgca tgttgggaag gttgcgaatg cgaagctcag
     4921 gcgcggtcga gaacgcaatc gcataatcgc cgctcccgtt tgttcccgcc gcgccggtgc
     4981 gcgccagacc cagcatcgag cgcgccgcaa gccgactcag attccgatga tcgatcggcg
     5041 cgtcagtggc gatcacgatg attattgagc cgtccgctgt gttcgcctgg ttcatttgcg
     5101 cagtggcttt ctccaactca tctttcagat aatacttccc gaggtcccga ccgaccggtg
     5161 cgccgtttat cgttaaaatt cccccgtaat tcgactgcac cagcacgccg acggtgtagc
     5221 caccaaggtt ctgcggcagc ttgcgcgaag ccgttccgat gccgcctttc catccaaaag
     5281 caaccgttcc cgtgcccgcg ccgaccgcgc cttcttcaac cggaccgctg cgcgcgctct
     5341 tgatcgccgc gaacacatca tcgcgactgg catgccgccc gcgaatgtcg ttcaggtatc
     5401 cgtcgttagt ctcaccaatc aacggattga tcgattggac atcctcgttg cctggcagcg
     5461 cgagcatgta atcgatgacg gcgtctgcag tccgcggcac actcagggtt gacgtcagca
     5521 tgattggcgt ctcgatctcg cccagttcgt tcacctgcgt cgaacccgcg agttttccaa
     5581 acgcgttgcc gatgaacacg gctccgggaa ccttctcacg aaaaagattc ccgccatgcg
     5641 gcagaattgc agtcacgccg gtacgcacat tgtcgccgcg gacaattgtt gaatgaccga
     5701 ctgtaactcc accgacatcc gtgatcgcgt ttagcgatcc tggcgacagc acgccaacga
     5761 cgatgcccgc ttcacgagtg cgcgggcgcc ggtcgtgttg ggcatctgtc tgtttactta
     5821 caaaagcgag aacgagaagg aaaacaggta gggacgcgag aaggattctg aagcggcgca
     5881 tctcagactt caattccacg cgagcacggc cagtactgcg gggatgagga gccacagcag
     5941 tcctttaacc aggaagaaca tgaagcccca gaagccgagg cgctttaccc aggttttaat
     6001 ctttgtggaa ttcactgcga cctcaaaaag atatcatcat tggttacggc cgtacgcgcg
     6061 ccgggactga gcagcgaacg cacaaagatg tacatcgccc agcactcgat tgcaaatggc
     6121 gggaagccca gatacccgag caccggcatt tcgaagattt taatttcgcc gaagtaagga
     6181 actgtgtacg tccatttcgt caacgcccag tagttccagg actcccaaag aaagccacag
     6241 atgaagccgc tcgccagcag cgaaagcaac cgtcgccagt cgccgcgagc caaatcgccg
     6301 ctaatcgatg gccagccgcg aagcgcattt aacggatcaa gcaaaagaat gaaactaagc
     6361 caaatgattg gcgcgaacca gccggaaaga atgatcagcg gcacaatggc gccgacagcg
     6421 ccgatgatga tcagcagaac tttggctgac ttcgaaaggg aaagccgcaa cgccagtcgg
     6481 ctacgcgcaa agatcgtgct tcggaaaagt tctgccgtcg cgaacatcgc cgggaaaatc
     6541 gttgcgaaag cccagtcgta gccgatcctc cgcacccaaa gatttggttc gagattgtga
     6601 tagtgccacc aaagctccag atcggaattc caaaaccgcg gcgcgttgta gaactcaaac
     6661 agccaccagc cgccgactga aatcaacgca acgagcaaaa actcaagccg atcagtcatc
     6721 aaaggcgaac ggcccctgaa tttgtacagc aac
//
LOCUS       DATDBY010000426         2779 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2054486, whole genome shotgun sequence.
ACCESSION   DATDBY010000426 DATDBY010000000
VERSION     DATDBY010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2779
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2054486"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VIT19_08040"
     CDS             complement(<1..233)
                     /locus_tag="VIT19_08040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838971.1"
                     /translation="MIKSKVFPTVITAATAVLIFVSAADAQRRTTGRRTVCGNPTAAC
                     PSQATFEPHDLRFRVRSTAVIWETELFYAVVLK"
     gene            complement(411..498)
                     /locus_tag="VIT19_08045"
     tRNA            complement(411..498)
                     /locus_tag="VIT19_08045"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(462..464),aa:Ser,seq:gga)
     gene            complement(557..646)
                     /locus_tag="VIT19_08050"
     tRNA            complement(557..646)
                     /locus_tag="VIT19_08050"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(610..612),aa:Ser,seq:cga)
     gene            complement(719..1219)
                     /gene="tadA"
                     /locus_tag="VIT19_08055"
     CDS             complement(719..1219)
                     /gene="tadA"
                     /locus_tag="VIT19_08055"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: protein motif:HMM:NF008113.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HEY5838972.1"
                     /translation="MFSAVAGEVSGEARAVHERWMSEAIRAAREAEAAGEVPIGACIV
                     IDGELHAVAGNRTRTDCDPTAHAEVVALREAARKFGNYRLANAVVYSTIEPCAMCAGA
                     LIQARVPLLVYGAPDERAGAVDSHFHICDSDHLNHRVEVIRGVLEAECRALMQGFFRA
                     RRKDEG"
     gene            1313..2392
                     /locus_tag="VIT19_08060"
     CDS             1313..2392
                     /locus_tag="VIT19_08060"
                     /inference="COORDINATES: protein motif:HMM:NF021539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2270 domain-containing protein"
                     /protein_id="HEY5838973.1"
                     /translation="MPTTTEPTQRTTGARTDSIHESQITSRIPSRPSGVPRDPSLAVP
                     GERPAGRLRPVSVDSSHETVTPDRQKVNPVDPAKRMSSVEITTAMVHFYRGEIQRSNT
                     WRNRLDTTTNWAVLTAGGALSFAFSSPNNPHFIIPIISILVSIFLLMEARRYRYYEIW
                     ASRVRVLETGYYAPMLAPDNVPRDQEWASHLANDLLTPHFTISVWEAIGRRLRRNYIW
                     LFALLALSWNLKVYLHPVSALTFDEFLVRAQVGLIPGWIVFLVGFLFNAALFVGAVGT
                     LKLREATGEVLPRHEFSLHPLQRMSSWTRAATSVPKATVRRAKRARQRLRSGVTGEHK
                     KIDNTRTPDRRIHDTDTPDRVKSKP"
     gene            2454..>2779
                     /locus_tag="VIT19_08065"
     CDS             2454..>2779
                     /locus_tag="VIT19_08065"
                     /inference="COORDINATES: protein motif:HMM:NF012447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid lyase"
                     /protein_id="HEY5838974.1"
                     /translation="MIELDGQRLSLAEVSAVARAEEAVALAAKARERIEQSRLVVERI
                     IAENRTVYGINTGFGKLSDIRIDPSQIRELQLNLVRSHSCGLGNPLSIEEARAMLLLR
                     ANVLALG"
BASE COUNT          591 a          850 c          751 g          587 t
ORIGIN      
        1 cttttaagca cgactgcgta gaagagctcc gtttcccaaa tgactgctgt actccgcacg
       61 cgaaaccgca agtcgtgcgg ttcgaaagtg gcctgcgacg gacacgcggc ggttggattg
      121 ccgcagactg tccgacgccc ggtggttctc cgctgcgcgt ctgcggcaga aacgaaaatc
      181 aagacagcag tcgccgcggt gatgactgtc gggaatactt tagatttgat cataagattc
      241 accacagagg tcagatgtca gagatcagag gtcagaaaac cgacgccagc aacagacctc
      301 tagtatgttc aagatcgtca gaggttatga gttggtcgcg cccagtctga catctgacct
      361 ctgacctctg atctctgatc tctgatctct gcctctgaca tctgttgtta tggcggaaag
      421 ggtgggattc gaacccacgg tacgttgccg cacacagcat ttccagtgct gccagttaag
      481 ccactcctgc acctttccaa aagccagaga tcagatgtca gagatctgat ctctgacttc
      541 tgacctctgc atttcatggc ggagagggtg ggattcgaac ccacggtggg cgttaaccca
      601 ctccggtttt cgagaccggt gcactaatcc actatgcgac ctctccgcgc taaagcaagg
      661 atgaaggatg aaggcggaag gatgaaatag atgggctaca ctactccgct ttcatccttc
      721 atccttcatc cttcctcctt gctctaaaga acccttgcat cagcgcgcgg cactctgctt
      781 ccaaaacacc gcggatcacc tcgacccgat gattcaaatg atcggagtcg cagatatgaa
      841 agtgagaatc gactgcccca gccctttcgt ccggggcgcc gtaaaccagc agcggtacac
      901 gcgcctgaat caacgcgccg gcgcacatcg cgcacggctc gatcgtcgag taaaccaccg
      961 cattcgccag ccggtagttg ccgaatttcc gcgcggcttc tcgcaacgcg accacctcag
     1021 catgggccgt cggatcgcaa tccgtgcgcg tgcggttgcc ggcaacggcg tgcagttccc
     1081 catcgatgac gatgcaggct ccaatcggaa cctcgcccgc ggcttccgcc tcgcgcgccg
     1141 cacgaatcgc ttcgctcatc cagcgctcgt gcaccgctcg cgcttcacca ctcacttcac
     1201 ctgctacggc tgaaaacatc gcttcaaaca gcaaaggtca actatactca tttcatgtta
     1261 ttatcaccaa ggcttcagcg gacgctccca aaccgcaagt tctcagccta agatgccgac
     1321 gactactgag ccaacccaac gaactaccgg cgcgcgcaca gacagcattc acgaatcgca
     1381 gatcacttcg cgaatcccgt cacgaccgtc gggcgttccc cgtgatccgt cgctggccgt
     1441 gccgggcgaa cggcccgcgg gccgcctccg gccggtgtcg gtcgattcat cgcacgaaac
     1501 tgtgacgccg gatcggcaga aagtaaatcc ggtagatccg gccaagcgga tgtcgtcggt
     1561 ggaaattacc accgcgatgg tgcacttcta tcggggagag attcagcggt cgaacacctg
     1621 gcgcaaccgg ctggatacca caacgaattg ggcagtgttg acggcaggcg gcgcactctc
     1681 gttcgcgttc agctcgccta acaatccgca tttcatcatt ccgatcattt cgatcctcgt
     1741 gtcgatcttt cttttgatgg aagcgcgtcg ctatcgttat tacgaaattt gggccagccg
     1801 cgtccgcgtc ctggaaaccg gatactacgc gccgatgctc gcgcccgaca acgtgccgcg
     1861 cgatcaggaa tgggcttcgc acctggcgaa cgatttattg acgccgcatt tcacaatcag
     1921 cgtctgggaa gcgattggcc gccggttgcg ccgaaactat atctggctgt tcgcgttgtt
     1981 ggcgttgagt tggaatctga aagtttatct gcatccggtt tcggccctga cattcgatga
     2041 gtttctggtg cgcgcgcaag tgggcttgat tcccgggtgg atcgttttcc tcgtcgggtt
     2101 ccttttcaac gcagcgttat ttgttggcgc cgtaggcacc ctcaagctgc gcgaagcgac
     2161 cggtgaagtt ttgccgcgtc acgagttttc gctgcatcca ttgcaacgca tgagcagctg
     2221 gacgcgcgcc gcaacttcgg tccctaaagc tactgtgcgc cgcgccaagc gcgcgcgcca
     2281 gcgcctgcgt agcggcgtca ccggcgagca caagaaaatc gataatacgc ggacgcccga
     2341 tcgtcgtatt cacgacacag acactcctga ccgagtgaaa tccaagccgt aaaccgcgag
     2401 ccgtcagcag tcactaagaa ctgcttaccg ctcactgctt actgctcacc aatatgatcg
     2461 aacttgacgg ccagagactg tcgctcgctg aagtgtcggc ggtcgcgcga gctgaagaag
     2521 cggttgcgct cgccgcgaaa gcacgcgagc gaatcgaaca gtcccgcctc gtcgtcgaga
     2581 gaatcattgc cgaaaatcgt accgtctatg gcatcaacac gggctttgga aagttgtccg
     2641 acattcgcat cgacccgtcg cagattcgcg agctgcaact gaatctcgtg cgcagccatt
     2701 cgtgcggtct cggcaatccc ctgtcgattg aagaagcgcg cgcgatgttg ctgctgcgcg
     2761 cgaatgtcct ggcgctcgg
//
LOCUS       DATDBY010000427         2149 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2464073, whole genome shotgun sequence.
ACCESSION   DATDBY010000427 DATDBY010000000
VERSION     DATDBY010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2464073"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..403
                     /locus_tag="VIT19_08070"
     CDS             <1..403
                     /locus_tag="VIT19_08070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838975.1"
                     /translation="RRRKHHLRSINRKAVQNQLKQAEHAIQTATDDRQKRIQQANAEI
                     LRRRVAAFNDLERSVRLVEGQLQSIENFFGLVNDQVVTLPTPERVSALHFEQLSDSIA
                     MTRQMLEETADTFGMLDNQNRELDLLLSGGK"
     gene            830..>2149
                     /locus_tag="VIT19_08075"
     CDS             830..>2149
                     /locus_tag="VIT19_08075"
                     /inference="COORDINATES: protein motif:HMM:NF014868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide reductase N-terminal alpha
                     domain-containing protein"
                     /protein_id="HEY5838976.1"
                     /translation="MKSASGAKMTKVSENEILPSNGSHASGGLHAGGMRSALRRAIQP
                     LGLNARKVVSKRYSLKDAKGNSIEEWSDIVARVVAHVSVAETDPAERDLFFNTMSDIM
                     MAREFVPNTPCLVNAGKPNGQLAACFVLDVPDSIAGIMKTATDAAIIHQTGGGTGFTF
                     EKLRPSGSMVSTTHGVASGPVSFMNIFNTTTDTVKQGGVRRGANMGMMRVTHPDVLRF
                     IHAKNDQHSLTNFNISVNVTDKFLEAVDKSEWYQLEFGGETWNDPVFDPVTGRNYVVY
                     RRPDGSTVTFRDKESFETADLSDALIEEPPAPGFVYAPDIWNRIISSAHKYAEPGIAF
                     IDEVNRHNHMINSMGPIMASNPCGEQFLHFANSCNLGSIDVNKFYDRENRVDWDRLAE
                     VTHWTTRFLDNVIDTCAWPLPEINDVVKRTRPVGLGIMGFADLCLNLK"
BASE COUNT          497 a          622 c          590 g          440 t
ORIGIN      
        1 tcgccgccgg aagcatcacc ttcgctcaat caatcgtaag gccgttcaga accaactgaa
       61 gcaagctgag cacgcaatcc aaaccgcgac tgacgatcgg cagaaacgca tccagcaagc
      121 caacgcggaa attctcaggc gacgggttgc tgcctttaac gatctcgaac gttcagttcg
      181 cctcgttgaa gggcaactgc aatccatcga aaacttcttc ggattggtca acgatcaagt
      241 agtgacgttg ccgacgcccg agcgcgtttc ggccttgcac ttcgaacagc tcagcgattc
      301 gattgcgatg acccgtcaga tgctggaaga aaccgcggac actttcggca tgctcgacaa
      361 ccaaaaccgc gaactggatc tgctcctctc aggcggcaaa taatggcaga aacccgaccg
      421 ttagggaggg tgccgaattt caacgcggct tacgtttgaa tgcaccctcg ctgacgctcg
      481 ggtttccgcc ggctttccgc agtgccaacc ctctgatttg ccgccactta accctcaagt
      541 atttcctcag aaaacccacc ctatcgtgtt gaaaaaaaaa gtcaccacaa catattgaca
      601 tcctgaaaac tcaggagtat agtccgtcct gcttcggttg tgacggctgg cggcggcggc
      661 ggaaagggtc ccgaacccaa cttcgcaagg cattggtgac ttcgcaaaac cgaccgtagt
      721 atctcaaaaa atcgaatctt tttggacggc gatcacggat cgtcggtggc tttttattcc
      781 ccgaactcgg ctcgcgtgcg gttccccgcg cgagaaaggt aagatagaaa tgaaatcagc
      841 gagtggtgcg aagatgacaa aggtgtcgga aaacgaaatc ctcccatcaa acggttcgca
      901 cgcctccggc gggctgcatg ccggaggcat gcgtagcgct ctgcgccgcg cgattcaacc
      961 cctgggtttg aatgcgcgga aggtggtctc caaacgttac tcgctgaaag acgccaaagg
     1021 aaactcaata gaagaatgga gcgacatcgt ggctcgcgtg gtcgcgcacg tatctgtcgc
     1081 cgaaaccgat cccgccgaac gcgatctttt cttcaacacg atgtcggaca tcatgatggc
     1141 gcgcgagttc gtgccgaaca cgccgtgcct ggtcaacgcc ggtaagccaa acggacagct
     1201 cgctgcgtgc tttgtgctcg atgttccgga ttcgatcgcc ggcatcatga agacggccac
     1261 tgacgccgcg atcattcatc agactggcgg cggtaccggc ttcacttttg agaagctccg
     1321 tccgagcggt tcgatggtca gcaccacgca cggcgtcgcc agcggtcccg tgtcgttcat
     1381 gaacatcttc aataccacga ccgacacggt gaaacagggc ggagtgcgtc gcggcgcgaa
     1441 catgggcatg atgcgcgtca cgcacccgga cgtgctgcgc ttcattcacg cgaagaacga
     1501 tcagcactcg ctcacgaact tcaacatctc cgtcaacgtt accgacaagt ttcttgaggc
     1561 ggttgataag agcgagtggt atcagctcga gttcggcggc gagacctgga acgatccggt
     1621 attcgatcca gtcacgggtc gcaactacgt cgtctatcgc cggcccgatg gctcgaccgt
     1681 cacgttccgc gacaaagaat catttgagac ggccgatctt tccgacgctt tgattgaaga
     1741 gccgccggcg ccgggattcg tttatgcgcc ggacatctgg aatcgaatca tttccagcgc
     1801 ccacaaatac gctgagccgg gcatcgcctt catcgacgaa gttaatcgcc acaatcatat
     1861 gatcaattcg atgggaccga tcatggcgag caatccgtgt ggtgagcagt tcctgcactt
     1921 tgcgaattcg tgcaacctgg gctcgatcga cgtgaacaag ttttacgatc gtgaaaaccg
     1981 tgtggattgg gaccggctgg cggaagtcac gcactggacg acgcgttttc tcgacaacgt
     2041 gatcgacacg tgcgcgtggc cgctgccgga gattaacgac gtcgtgaaac gcacgcgccc
     2101 ggtgggcctt gggatcatgg gcttcgccga cctctgtctg aatctgaag
//
LOCUS       DATDBY010000428         2293 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1736791, whole genome shotgun sequence.
ACCESSION   DATDBY010000428 DATDBY010000000
VERSION     DATDBY010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2293
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1736791"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(188..952)
                     /locus_tag="VIT19_08080"
     CDS             complement(188..952)
                     /locus_tag="VIT19_08080"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY5838977.1"
                     /translation="MSTPTNWFETFFQGVTLDLWRRAIPPEQTTAEADFLIQNLKCAP
                     GTHLLDVPCGNGRLTFELANRGYRVAGIDLAEEFIAEARMAAHDGTTAVEFILGDMRN
                     IEGLGVYDGAFCFGNSFGFLEYADMEKFLAGVARALKPGARFLVNTAMAAESVLPDFE
                     EQSCHEMGDIVMTIKERYVAEESCVDSEYIFERNGEIDSRKAKHWIYTVAEIRRMLER
                     AGFEVVSCFGSLKGEAFKLGARELFVVSTVRTPLAC"
     gene            complement(992..1597)
                     /locus_tag="VIT19_08085"
     CDS             complement(992..1597)
                     /locus_tag="VIT19_08085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838978.1"
                     /translation="MTVKALILVSVLVLSASFAFSQTQQAVSEQDWEKLYSALENEDW
                     KTAAELSERYLKQTGGDKESSARLRYMLIFTSAGRVARRQITHDELGKMLADFTGKEI
                     TLPGTTFSTKCPAPMNSFCISKDGNFNVSRAAANGAGTNIHAFEYVKLDNSSNLDKRD
                     GEVGVVSGVLSEFQVNPNKSTIWIVRLIIEKGSVVFGKPKT"
     gene            complement(1665..>2293)
                     /locus_tag="VIT19_08090"
     CDS             complement(1665..>2293)
                     /locus_tag="VIT19_08090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838979.1"
                     /translation="RFIPGEVFHVDSLVSNGRVAFAGVNKYGRPPLQVAHGGGAYISQ
                     TIRHDSREKKKLLEINRRLIKAMRMEIGATHAEFIKSDADGEFYFLEIASRVGGAYIA
                     DVLEAASGINLWREWAKLEVKGASHSPRLRPRREHAGIVLSLAKQEFPDTSVYDDPEI
                     AYRVKKKHHAGLIVQAKTHERVTELLNDYARRFENDFIAVLPPLERPE"
BASE COUNT          493 a          680 c          601 g          519 t
ORIGIN      
        1 ccgcgcgcgc attcatcatc cgccgtggcc tttgcagaaa gccacgatga acgcctattc
       61 atctacgatg atcgaatcgt tgggattacc tgcgccgtcg ggagaaccgg tgttgaatta
      121 cgcggaagag ttggaagtgg acgtctggcc gattcatcgc gtgtaggtac gcaggcctct
      181 ggcctgctta gcacgccagc ggcgtgcgta ccgttgacac aacaaacaac tcgcgcgcgc
      241 caagtttgaa agcctcaccc ttcagcgaac cgaagcaact cacaacctcg aatcccgcgc
      301 gctccagcat cctgcgaatc tccgcaaccg tgtaaatcca atgcttcgct ttgcgtgagt
      361 caatctcgcc gttgcgctca aagatgtatt cactgtcaac gcagctttcc tcagcgacgt
      421 atcgttcttt gatcgtcatg acgatgtcgc ccatttcgtg acaactttgc tcctcaaaat
      481 ccggcaagac tgactctgcg gccatcgcgg tgttgactaa aaagcgtgcc ccaggtttaa
      541 gcgcgcgcgc gacaccggcc agaaacttct ccatgtccgc gtactcaaga aatccgaagc
      601 tgtttccaaa gcagaacgcc ccgtcgtaaa caccaaggcc ttcgatattt cgcatgtcgc
      661 ctagaatgaa ctcgacggct gtggtgccgt catgtgcggc catacgcgcc tcggcaataa
      721 actcctccgc aagatctatc cccgcgactc gatatccacg attcgccaac tcaaacgtga
      781 gccggccatt gccacacggc acgtcgagaa ggtgcgtgcc cggcgcgcac ttcaggtttt
      841 gaatcaggaa gtcagcttcg gccgttgttt gttccggagg aattgcccgc cgccaaaggt
      901 ccagcgtgac gccttggaaa aaggtttcga accagttagt aggtgtggac atcagtcggt
      961 ggatggcggc aactttgaat cgggcgagta tctacgtctt gggttttccg aagacgacac
     1021 ttcccttctc aatgattaat ctaacgatcc aaattgtcga cttgttggga ttgacttgga
     1081 actcgctcag gacgccgctg actactccca cttccccgtc acgcttgtcg aggttgctcg
     1141 agttgtcgag cttcacgtac tcaaacgcgt gaatgtttgt gccggccccg tttgcagcag
     1201 cccgcgacac gttaaagttg ccatccttcg agatacaaaa agagttcatc ggcgcggggc
     1261 attttgtgga aaaggtggtt cccggcaggg tgatttcctt gccggtgaaa tcagccagca
     1321 tcttaccgag ttcgtcatgc gttatttggc gacgcgccac ccgaccggca gatgtgaaga
     1381 tcagcatgta acgtaagcgc gcgctggatt ccttgtcacc accggtttgc ttgaggtatc
     1441 tctccgatag ctccgccgcc gttttccagt cctcattctc aagcgcggaa tagagttttt
     1501 cccaatcctg ttccgaaaca gcttgttgag tttggctgaa cgcgaacgag gcgctgagaa
     1561 caagtaccga caccagtatc aatgccttga ccgtcacggg taattctcct caatcactcg
     1621 gctggcgaga aatccaaagc gccgtcgagc cggcgcactc caaatcactc cggccgctca
     1681 agcggcggca gcacggcgat gaaatcattc tcgaatcgtc gcgcgtagtc gttcagcaac
     1741 tcagtcacgc gctcgtgagt tttcgcctgc acaatcagtc cggcgtgatg cttcttcttc
     1801 acgcgatagg cgatttccgg atcgtcatag actgacgtgt cgggaaactc ctgcttcgcg
     1861 agcgaaagaa cgatcccggc gtgttcccgg cgcgggcgca aacgtggact gtgactggcg
     1921 cctttaacct cgagcttcgc ccattcgcgc cacagattta ttcccgaagc cgcctctaac
     1981 acgtcagcga tgtacgcgcc gcccacgcgc gaggcgatct cgagaaaata aaactcgcca
     2041 tcagcgtcgc tcttgatgaa ttcggcgtgc gtggctccga tttccatgcg catggccttg
     2101 atcaagcgac gattaatctc tagaagcttt ttcttttcgc gcgagtcgtg ccgaatagtc
     2161 tgcgagatgt acgcgccgcc gccgtgagca acttgcagag gcggccggcc atatttgttg
     2221 acgccggcga acgcaacgcg tccattgctg accagcgaat ccacgtgaaa gacctcgccg
     2281 ggtatgaagc gtg
//
LOCUS       DATDBY010000429         2309 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_292116, whole genome shotgun sequence.
ACCESSION   DATDBY010000429 DATDBY010000000
VERSION     DATDBY010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292116"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1118)
                     /locus_tag="VIT19_08095"
     CDS             complement(<1..1118)
                     /locus_tag="VIT19_08095"
                     /inference="COORDINATES: protein motif:HMM:TIGR03663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase activity-associated protein Agl23"
                     /protein_id="HEY5838980.1"
                     /translation="MSTASTKSRPKKRPQSPVNEAPAANASDRLPGEISERTFRISAA
                     AILIVGAFLRLFHLALVPLHHDEGVNGNFLVSLVRSGTYTYDPNNYHGPTLYYFSAII
                     AWIARFFGGVGARDAYGLTTFNIRFVTAAFGVATIGLAFLLRKRLGAIGALSAGALIA
                     VSPGAVYLSRYFIHESLFVFFMMGIVVAAVKYYDTGAGIYLILAAISAALMTATKETW
                     IINGPVLLIALITTNVYFWLRKKMAAQQASARRPDEPFLARFGGPISVATVALVAFTV
                     FIVVNVLFYSSFFSNYPKGVNDSLQTLALWRKRTHEHAHPWYQYIRWLLQKESIVLIL
                     GGIGALIALWRSDNRLVLFVAQWAFGLLAAYSLVGYKTP"
     gene            complement(1087..>2309)
                     /locus_tag="VIT19_08100"
     CDS             complement(1087..>2309)
                     /locus_tag="VIT19_08100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838981.1"
                     /translation="IHAHSFISIMLVATFLVPWVYRRAWIAYATATLFGGIIFLTAAS
                     YGAAGSPLIKIAFVVIVFGLIANLWFLLPRQHLRFWLCFFVMALVVGLPQIFWSTRGS
                     AVKTESFIAWKFGWDSDQKASKDPTHSNMGDVLSSWGPPVEPVPISALPPIRAWIRRV
                     PYVAWFWLKNTGLFIPLLILALVWKPDDYLVRRKLLLFYVPFTLCFLIPNFVKLAPWV
                     WDNIKMIFYWWIVSAPIVALLLARLWEQNVGRRVLAASLFVILTLAGGLDIFPLLTGQ
                     GEYQEFDRNGVEFAESVKETTPPTATILHAPIHNTPIFLTGRRSIMGYPGHIWTHGLD
                     FGPRENEIKQIYAGGMDADALLAKYRVDYVVIGPHEESVVKPNVAFFERYQLVVRIPP
                     TEKFGEYRLYKVTP"
BASE COUNT          594 a          655 c          641 g          419 t
ORIGIN      
        1 ggcgtcttgt aaccgaccag cgaataggca gcgagcaaac caaacgccca ctgggccaca
       61 aacagcacca gtcgattgtc agagcgccac agcgcaatca atgcaccgat gccgcccagg
      121 atcaggacga tgctttcttt ctgaagcaac caacgaatgt actggtacca cggatgcgcg
      181 tgctcgtgcg tgcgcttgcg ccatagggcc agcgtttgga gcgagtcgtt cacccctttc
      241 ggatagttgc tgaaaaagga cgagtagaag agaacgttga cgactatgaa aaccgtgaag
      301 gcgacgagcg caaccgtcgc cactgaaatt ggtccgccaa accgagccag gaacggctcg
      361 tctggtctgc gtgcgcttgc ctgctgtgcg gccatctttt tccgaagcca gaagtagacg
      421 ttcgtcgtaa tcagtgcgat caaaagcacg gggccgttga tgatccaggt ctctttcgtt
      481 gctgtcatca acgccgcgga tatagccgcg aggatcagat aaatgccggc cccggtgtcg
      541 tagtatttca ccgcggcgac cacgatgccc atcatgaaga aaacgaacag tgactcatgg
      601 atgaagtagc gcgacaggta aaccgcgccc ggtgagacag caatcaaagc tcccgccgac
      661 aaagcgccaa tcgcgcccag ccttttccgc agcaaaaaag ccaaaccgat cgtcgccacg
      721 ccgaaagcgg cggtgacgaa tcgaatgttg aaggttgtca ggccgtaggc gtcgcgcgct
      781 cctacgccac cgaagaagcg cgcgatccac gcgataatcg ccgaaaaata gtagagcgtc
      841 gggccgtgat agttgtttgg gtcataggtg taagtgccgc ttcgaaccag cgacacgagg
      901 aaattgccgt tcacgccttc gtcgtgatgc agtggcacaa gcgccaaatg aaacagacgc
      961 aggaatgccc cgacgataag aatagccgcg gccgaaatgc gaaacgtgcg ctcagagatc
     1021 tccccgggca ggcgatcgct cgcgttcgcc gccggcgctt cattcaccgg cgattgcgga
     1081 cgcttcttag ggcgtgactt tgtagaggcg gtactcacca aatttctccg tcggcggaat
     1141 tcttacgact agctgatagc gctcaaaaaa cgcgacgttc ggcttcacca ctgactcttc
     1201 atgcggaccg atgacaacat aatcgacccg gtatttcgcg agcaaggcgt cagcgtccat
     1261 gccgccggca tatatctgtt tgatctcatt ctcacgcggc ccgaaatcca aaccgtgcgt
     1321 ccaaatgtga cccggataac ccatgattga ccggcggccg gtcaggaaga tcggtgtgtt
     1381 gtgaatcggc gcgtgcagaa tcgtcgccgt cggcggcgtt gtttctttga ccgattcagc
     1441 gaattcgacg ccgttgcgat cgaattcctg atactcgccc tggcctgtga gcagcgggaa
     1501 aatatccaac ccgccggcga gggtcaggat aacaaagaga ctggccgcca aaacccttcg
     1561 tccgacgttc tgctcccaaa gccgcgccaa cagcaaagcc acgatcggcg ctgagacaat
     1621 ccaccaatag aagatcatct tgatgttgtc ccaaacccac ggcgccagct tcacgaaatt
     1681 cgggatgagg aaacagagcg tgaacggaac ataaaacagc aggagttttc gccgcaccag
     1741 ataatcatca ggtttccaga ccagggcgag gatcaagagc ggaatgaaca agccggtgtt
     1801 cttcagccag aaccaggcga cgtacggcac gcgccttatc caggcgcgaa tcggaggcag
     1861 cgcggaaatt ggaactggct caactggagg gccccacgat gataggacgt cgcccatatt
     1921 agagtgggtc ggatccttcg aagccttttg atcgctatcc caaccgaact tccatgcaat
     1981 aaaactctcg gtcttgacgg cgctgccacg ggttgaccaa aagatttgcg gcaaaccaac
     2041 gacgagcgcc atgacaaaaa agcagagcca aaaacggaga tgctgtcgcg gcagcagaaa
     2101 ccagaggttg gctataagtc cgaacacgat gacgacgaac gcaatcttga tcagtggcga
     2161 accggctgca ccgtaacttg ccgccgttaa aaaaatgatt ccgccgaata gcgtggctgt
     2221 cgcataggca atccatgcgc gccggtaaac ccagggcacc agaaacgtag cgaccagcat
     2281 gatcgagatg aaactgtgcg cgtgaatca
//
LOCUS       DATDBY010000430         2602 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_825077, whole genome shotgun sequence.
ACCESSION   DATDBY010000430 DATDBY010000000
VERSION     DATDBY010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2602
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_825077"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..465
                     /locus_tag="VIT19_08105"
     CDS             <1..465
                     /locus_tag="VIT19_08105"
                     /inference="COORDINATES: protein motif:HMM:TIGR02999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type sigma factor"
                     /protein_id="HEY5838982.1"
                     /translation="RQMNQERAGHTLQATALVNEAYLKLAGESSFEWHDRAHFFAVCA
                     QVMRHILIDHARAHARDKRGGGAIQVSLNDVAVIDAGPAEDVVALDEALRELETQDPQ
                     KGKIVELRYFGGLTIEDTAEVLGISPRTVRREWRRSKAWLYRMISEGHSDET"
     gene            455..>2602
                     /locus_tag="VIT19_08110"
     CDS             455..>2602
                     /locus_tag="VIT19_08110"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY5838983.1"
                     /translation="MKPDRWQQVDELFAAALERDRADRPAYLDQACGDDQELRREVEK
                     MLRFDEQAADFIEKDVFSVAAGLLTGQSLSLGPTEKLGRARKSESSSISSSSDESRFI
                     SGDVLSDRYRVFGLIGRGGMGEVYRADDLKLKQQVALKFLPESLSADGAALARFYKEV
                     SVARQISHRHVCRVYDVGEHEGAHFISMEFVRGEELSSLLKRIGHLPHDKAVEIARQL
                     CAGLAAVHERGVLHRDLKPANIMIDERGEVRITDFGLAATAEQTRGRDSMSGTPAYMS
                     PEQFEGRELTAKSDIYSLGVVLYEVFTGKRAFEASSLAELIRLRQSHSTPTNPSELIA
                     HLDPLVERVILRCLEHDPAKRPASALQVAAALPGGDPLAAAMAAGETPSPEMVAAAPK
                     EGGLRPVVAVSLLASLFVLVAVVCFLSKSVTMYRYVPLNKSPEVLRDRSTDIVRKLGY
                     VTPAGDNAYGMGVDRGYLNYVRHTDASVTRWERLRTGQPAAIYFWYRQSPRPFDVSDG
                     GGVSESSPARDLPGMTTLTLDTLGRLRSFYAVPPQKSFAREDSAAPDWTILFAESGLD
                     PTKLQPVSSSWTPPHEATTRAAWEGTYPDRPEFKIHVEAALFEGKPVYFEIIDVWDRP
                     LEPSAALGSISGPALVTLLLIVFITVMIGSAFLAWRNLRLGRGDRKGAFRLAVFAFAA
                     VFLRWLFTAHHVAALGEALNFISSVTNALFWAGF"
BASE COUNT          507 a          738 c          790 g          567 t
ORIGIN      
        1 cgccaaatga atcaggagcg ggccggccac actctgcaag ccaccgcgct cgtcaacgag
       61 gcgtacctta aactggccgg tgagagcagt ttcgagtggc atgaccgcgc gcacttcttc
      121 gccgtctgcg cgcaggtgat gcggcacata ctgatcgatc acgcgcgcgc gcacgcccgc
      181 gataagcggg gcggcggagc gattcaggtt tcgctaaacg acgtcgcggt aattgacgcc
      241 gggccggcag aggacgtggt ggcgctggac gaggccctgc gcgaactcga aacccaggat
      301 ccgcaaaaag ggaagatcgt cgagctgcgc tattttggtg gattgacgat cgaagatacg
      361 gctgaagtgc tgggaatttc cccgcgaacc gtaagacgcg agtggcggcg ctccaaggcc
      421 tggctgtatc gaatgatttc cgaaggtcac agtgatgaaa cctgaccgtt ggcagcaggt
      481 tgatgaacta ttcgcggccg cactcgaacg cgatcgcgcc gatcggccgg cttacctcga
      541 tcaagcctgc ggtgacgacc aggaactgcg tcgcgaggtc gagaagatgc tcaggttcga
      601 tgagcaggcc gccgacttta tcgagaaaga cgtttttagc gtcgcggctg gcttgctgac
      661 cgggcagtca ttgtcattgg ggccgactga aaagttaggg cgcgcaagaa aatccgagtc
      721 ttcttcaatc tcctcatcga gcgacgaatc cagattcatt tcgggcgatg tcctttcaga
      781 tcgctatcgt gtctttggcc ttataggccg cggcggaatg ggggaggtct atcgggccga
      841 cgacctcaag ctaaagcagc aggtcgcgct caagtttctt cctgaatctc tctcggctga
      901 cggcgccgcc ctggcacgct tctacaaaga agtaagcgtc gcgcgacaaa tttcgcatcg
      961 tcatgtttgc cgtgtctacg atgtcggcga gcacgaagga gcgcatttta tctcgatgga
     1021 attcgtgcgc ggcgaggagc tctcgtcgtt gctgaaacgc attggtcact tgccacacga
     1081 caaagccgtc gagatcgcgc gacagctttg tgccggcctt gcggccgtgc acgagcgagg
     1141 ggtgctgcat cgcgatctaa agcccgcgaa catcatgatt gatgagcgcg gcgaggtgcg
     1201 cattacagat ttcggcctcg cggctacggc cgaacaaact cgtggtcgtg attcgatgtc
     1261 ggggacgccc gcctacatgt cgcccgaaca attcgaaggc cgcgagctga cggcaaagag
     1321 cgacatttac tcgctgggcg tggtgctcta cgaagttttc acgggcaaga gggccttcga
     1381 ggcgtcgagc ctcgcggaat tgattcgttt gcgtcagagc cactcgacgc ccaccaatcc
     1441 gtcagagtta atcgcccatc ttgatccact tgtcgagcga gtcatcctcc gctgtctcga
     1501 acacgacccg gcaaaacgtc cggcttcagc acttcaggtc gcggccgctt tgccgggagg
     1561 agatccactt gccgccgcca tggctgccgg cgaaactccc tcgccggaaa tggtggctgc
     1621 cgctccgaaa gaaggtggtt tgcggccagt ggtcgccgtc tcgctgctcg cgtctttgtt
     1681 cgtcttggtt gcagtcgttt gttttctttc aaagagcgtg acgatgtacc ggtatgtccc
     1741 tttgaataag tcgccggagg tcctgcgcga tcggtccacc gacatagtcc gcaagctcgg
     1801 ctacgtcacg ccggctggcg acaacgctta tggcatgggc gttgaccgcg gatatttgaa
     1861 ttacgttcga catacagatg cgtcggtgac gcgttgggaa cgattgagaa ccggccagcc
     1921 ggcggcaatc tatttctggt accgccagag tcctcgcccg ttcgacgtgt ccgatggcgg
     1981 cggcgtatca gagagcagcc cggcgcgaga cttgcccggg atgacgacct tgacgctcga
     2041 tacactcggg cgattgcgct cgttttacgc cgtgccgcct cagaaaagtt tcgcacggga
     2101 agattcggcg gctccggatt ggacaatcct gttcgcggaa agcggacttg atccgactaa
     2161 actccaaccg gtctcatcca gttggactcc gccccatgaa gccacgaccc gcgcggcgtg
     2221 ggaaggcacg taccccgatc gaccggaatt caagatccat gttgaagcgg ctttgtttga
     2281 aggaaagccg gtttatttcg agattataga tgtctgggat cggcccctcg aaccgtctgc
     2341 cgctttgggt agcatcagcg gccccgccct ggtcacgctt ctgctcatag tctttataac
     2401 ggtgatgatt ggaagcgcat ttctcgcctg gagaaacttg cgattaggtc gtggtgatcg
     2461 caaaggagct tttcgacttg ccgttttcgc attcgcggcg gtttttctcc gttggctgtt
     2521 cacagctcat catgtggccg ccctgggtga ggcgcttaac ttcatttcga gtgtcactaa
     2581 cgcgctgttc tgggccggct tt
//
LOCUS       DATDBY010000431         5243 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1534882, whole genome shotgun sequence.
ACCESSION   DATDBY010000431 DATDBY010000000
VERSION     DATDBY010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5243
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1534882"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3386)
                     /locus_tag="VIT19_08115"
     CDS             complement(<1..3386)
                     /locus_tag="VIT19_08115"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY5838984.1"
                     /translation="MSPARQSFGESQPAFLFGRAAPDIKSNPVLYVLSIVLLAAVYFA
                     AGKFGLSLASVHTNVSPVWPPTGIALAAILILGYRVWPGIFLGALLTNFLTPIPTATA
                     FGIAIGNTLETVIAARVLMAIGFRPAMDRARDVFKFVVVAAACTAIAATIGNLSLYLG
                     GASSSANFGSLWMTWWLGDLTGALTVAPLILTWSLGTSHWLPKLRYLEATILVLLLSF
                     SAIVTFGEKAPTPVHYYPLSRLMIPFLLWAAFRLGRRGVTVAVAVISAFAIWGTWHGL
                     GPFVTSDPNQSLMMLQLFIATNAVTFLFLVTVVEEKRLAETERREDQRRLEANLAVTQ
                     ILAESPKISIALERILPTVGESLGWEFGCVWMPATNGQELRSVATWQKTPKPQFDTIC
                     RARTFEPGVGLPGRVWANREPAWIRDVAHDDNFPRMPVALEEGLHGAFAFPVTFNERF
                     LGVMEFFSPEIRQPDEQLLAMFAGIGSQIGQFIERKRADEALRENESRLRLATKTGNV
                     GIWDWDIVTNRVSWTDSLYEIHGVGKEDFAGTVEAFAALIHPEDRERVSKAIEDTLRR
                     DAPYQLEMRIVRPEDGEVVWIYTNATVLRENGEPVRMLGGSVDITGIKRAELALRDSE
                     QRYRSVIEALPAAVYTTDALGRVTMFNQAAVEFSGRTPEVGSDSWCVTWKLYHPDGTP
                     MPHAECPMAMTLNSGESVRGYEAIAERPDGSRVNFIPYPTPLHDSSGKMIGAINMLVD
                     ITERKRAEEALYASEQKAKAALEYAEATLRTSPIPLLVLEQDLRVRTANEAFYKGFQV
                     SAEETEGRFIYELGNGQWNIPKLRELLEEVLPRDKPFHESEVTHEFHTIGTRTMMLNA
                     RRMETDKSAPERIVLIIQDITDRKRAEKELRHLAAIVETTDDAVISKNLDGVITSWNP
                     AAERLFGYKAEEVVGKSVTVLIPPERHDEEPGILRRLRRGERIDHYETIRMAKDGRKF
                     HVSLTVSPIADVSGKIVGASKVARDITDQKRTQEEITRLLAAERAARQDAEVASRTKD
                     EFLATLSHELRTPLTAMLGWLTILRGHKLDKATTEHAIETIERNAKAQAQLIEDLVDI
                     SRIVGGKLNLEVVPTELMPIVDASIEVVRPAADAKEITIDV"
     gene            complement(3659..4042)
                     /locus_tag="VIT19_08120"
     CDS             complement(3659..4042)
                     /locus_tag="VIT19_08120"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5838985.1"
                     /translation="MPKLSSAAPTFAVADVGDTIRWYQEQLGFTTYPFPETPPHAFAI
                     VSRDTVEIMFQHVPDYAKPDLYSQRRGGVWDAYIRMEGVKEFYESVKDRVEIVLPLRK
                     QPYGDWEFEVKDPNGYILVFSELID"
     gene            4212..5081
                     /locus_tag="VIT19_08125"
     CDS             4212..5081
                     /locus_tag="VIT19_08125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838986.1"
                     /translation="MNKDELMELAGNPNFISGIHNYCDRWCERCQFTSRCAVYAIEQA
                     DPDIDDSQARDITNEKFWRKMHEIFQLTADLISDWAAKNGVDLDSTDCEEAVAEHDRE
                     VEEAERDELSQAAHAYADSVADWFKNESIRETSIYDDTTASESAADDITVADAIDVIR
                     WYQFFIAVKTFRAISGSDSFAGREVEDEALSFDCFSNEAGDDEDVDYDAVLMRSAKMD
                     SHGSAKVALVAIARSTAAWRSLQISLPEKSATIQPLLVELDQLRRSLEARFPRVREFI
                     RPGFDELITEFVS"
BASE COUNT         1148 a         1470 c         1463 g         1162 t
ORIGIN      
        1 acgtcgatcg tgatctcttt agcgtcggcg gccggccgca caacttcaat cgaggcgtca
       61 acgatgggca tcaattccgt cggcacaact tccagattca gtttgccgcc gacgatgcgc
      121 gagatatcta cgagatcttc gattaactgc gcctgcgcct tagcatttcg ttcgatcgtc
      181 tcgatggcat gttcggtcgt cgctttatca agtttgtgcc cgcgcagaat cgtgagccag
      241 cccagcatcg ccgtcagcgg cgtgcgcaac tcatgcgaga gcgtcgcgag aaattcatct
      301 ttcgtgcggc tcgcaacttc cgcatcctga cgggcggcac gttccgccgc gagcagccgc
      361 gtgatctctt cctgagtgcg tttctggtcg gtgatgtcgc gcgcgacctt tgaggcgcca
      421 acgattttgc cgctgacatc agcgattggc gagacagtta gcgacacgtg aaatttccga
      481 ccgtctttgg ccatgcgaat agtctcgtag tggtcgattc gttcgccgcg tcgcagcctt
      541 ctcagaattc cgggctcttc atcatgacgc tcgggaggta taagcacggt gaccgacttg
      601 ccgaccactt cttcagcttt gtatccgaaa agcctctccg cggccgggtt ccaactggta
      661 atgacaccgt cgagattttt cgaaatcacg gcgtcgtcgg tcgtctcaac gattgcggcc
      721 aggtgccgga gttccttttc cgctcgtttt cgatccgtaa tgtcctgaat gattaggact
      781 attcgttcgg gcgcgctttt gtcggtttcc atccggcgag cgttaagcat catcgtgcga
      841 gtcccgatcg tgtgaaactc atgcgtgacc tcggactcat gaaaaggctt gtcgcgcggc
      901 aggacttctt ccaacaattc tcgcagtttg ggaatgttcc actggccatt acccagttca
      961 taaatgaagc ggccttccgt ctcctccgcg ctaacctgaa accctttgta aaacgcttcg
     1021 ttagctgtcc ttactcgtaa gtcctgctca agcaccagca acgggatggg cgaggtgcgc
     1081 agcgtagctt ccgcgtattc gagggcggcc tttgccttct gctcgctcgc gtacagtgcc
     1141 tcttcggcgc gcttgcgctc agtgatgtcc accagcatgt tgatggcgcc gatcattttt
     1201 cctgaactgt cgtgcagagg cgtcgggtag ggaataaagt tgacccgcga tccatccggt
     1261 cgttccgcaa tcgcttcgta accgcgaacg gactcgccac tattcaacgt catcgccatt
     1321 gggcattcag cgtgcggcat cggtgtgccg tcgggatgat agagcttcca cgtgacgcac
     1381 catgaatcgc tgccgacctc aggcgtgcgt ccggagaact cgacggcggc ttgattaaac
     1441 atggtaaccc ggccaagcgc atcggttgta taaacggcag caggtaaggc ttcaatcacc
     1501 gagcggtacc tttgctcact gtcgcgtaaa gctaattccg cacgcttgat gccggtgata
     1561 tcaaccgagc cccccagcat ccgcacgggc tcgccgtttt cgcgtagcac ggtcgcattg
     1621 gtgtaaatcc aaacgacctc gccgtcctcc ggccggacga ttcgcatttc aagctggtac
     1681 ggcgcatcgc gtcgcagagt gtcttcgata gcttttgaaa ctcgctctcg atcttcggga
     1741 tgtataagcg cagcgaatgc ttcaacggtg ccggcaaaat cttccttgcc tactccatga
     1801 atctcgtaaa gcgagtccgt ccacgaaaca cgattggtaa cgatatccca atcccaaatg
     1861 ccgacgttgc ccgttttagt cgcgaggcgc agccggctct cgttctcacg caaggcctca
     1921 tcagcgcgct tgcgttcgat gaactggccg atctgactgc cgatgccggc aaacatggcg
     1981 agcagttgtt cgtcaggctg ccggatttcg gggctgaaaa actccattac tccaagaaat
     2041 ctctcgttga acgtgacggg gaaggcgaaa gctccgtgta atccctcttc gagcgcgacc
     2101 ggcatgcgtg gaaaattgtc gtcgtgagcg acatcgcgaa tccatgcggg ttctcgattg
     2161 gcccagacgc gacccggtaa gcccacaccc ggttcgaatg ttcgggcgcg acagatcgtg
     2221 tcgaattgcg gtttcggcgt cttctgccag gtggcgacgc tgcgcagctc ctgtccatta
     2281 gttgcgggca tccagacgca tccaaattcc cagcccaacg attcacctac cgtcggcaga
     2341 atccgctcga gcgcaatgct tatcttcggc gattcggcaa ggatctgcgt aaccgcgaga
     2401 tttgcctcca gccgcctttg gtcttcacgg cgctctgttt ctgccagtcg cttctcttca
     2461 accacggtga cgagaaacag gaaggtgacg gcgttggtag cgatgaacag ctgcaacatc
     2521 atcagcgatt ggttgggatc gctggtaacg aaaggaccca agccatgcca cgttccccaa
     2581 atggcgaacg cggagatgac tgctaccgca accgttacgc ctcttcggcc aagtctgaac
     2641 gccgcccaaa ggagaaacgg aatcatcaga cggctgagcg gatagtaatg caccggcgtc
     2701 ggcgcttttt cgccaaacgt aacgatggcg ctgaaggaca gaagtagaac gagaattgtc
     2761 gcttcgagat atctgagttt cggtagccaa tgacttgtcc ccaaactcca ggtgaggata
     2821 agaggcgcca ctgtcaaagc gccggtaaga tctccgagcc accatgtcat ccagagcgat
     2881 ccgaaattcg ccgagcttga cgcaccgcct aaataaaggc ttaggtttcc gatcgttgcg
     2941 gcgatcgccg tgcaggccgc agccacgacc acgaacttga aaacgtcgcg cgcgcgatcc
     3001 atggcaggcc gaaacccaat cgccataagt acacgcgccg caatgactgt ttccagcgta
     3061 tttccgatgg caatcccgaa agcggtcgcc gtcggtatcg gagttagaaa attggtcagc
     3121 agcgcaccga ggaagattcc cggccatacg cggtagccga gtatcaggat ggccgctagt
     3181 gcgattcccg tcggcggcca aaccggggaa acgttggtat gaacagaagc caacgacaga
     3241 ccgaacttgc ccgctgcgaa atagacggct gcgagcaaaa caatcgacag cacgtataag
     3301 actgggttgc ttttgatgtc aggagcagct cgaccgaaga gaaaagccgg ttgggactcg
     3361 ccgaaagatt gtcgggctgg actcatagta gtgccaccaa attgttagga tctttgcgac
     3421 gcgttcttgg ggggaacccc ggccactcgg ggttcgggat cgagtaactt taccacagaa
     3481 aatgctgagg aggcgcggct gcttggcggt agcgagtggc cgttgaaagg gggcactggc
     3541 ccgactgtga aagagggcgg atctgtccgc attttggagc cctccctagc gaccacccca
     3601 cgcggactgc ccgcgcgggg accccggttg gtcgggctac tgcaccgctt agagttaact
     3661 agtcaatcaa ctcgctgaaa accagaatgt aaccgttcgg atccttcact tcgaactccc
     3721 aatcgccgta gggctgcttt cgcagcggca gcactatttc gactctgtct ttaactgact
     3781 cgtagaattc tttcacccct tccattctga tgtatgcgtc ccagacgccg ccccggcgct
     3841 ggctgtaaag gtcgggcttc gcgtaatccg gcacatgctg aaacattatt tcaacggtgt
     3901 cgcggctgac gatcgcaaag gcgtgtggcg gtgtctcggg aaagggatag gtcgtaaagc
     3961 cgagctgctc ctgataccag cgaatggtgt cgccgacatc ggcgaccgca aaagtcgggg
     4021 cagcgctgga gagttttggc attggtacgc gcacctccgg tgcgcaggtt ttgcacgccg
     4081 gagccgtgcg taccctcatc aactagagtc gcatgttatc ggaaaacatt tgtagtcatg
     4141 gtgacgcgac ggatattaca ttacaatgcg cggcgaacag agttaagagg cattcgaacc
     4201 tttctgatcg catgaacaaa gacgaattga tggagctagc cggtaacccg aatttcatct
     4261 ccggcattca taactactgc gatcgttggt gcgagcggtg ccagttcact tcgagatgcg
     4321 ccgtctacgc gatcgaacag gcggacccag acattgacga ttctcaggcg cgtgatatta
     4381 cgaatgaaaa gttttggcgg aagatgcacg aaatattcca gcttactgct gacctgatct
     4441 ctgattgggc cgctaagaac ggagttgatc tcgattcaac ggattgtgaa gaggccgtcg
     4501 cggaacacga tcgcgaggtg gaagaagctg aacgagacga actgtcacag gcagcgcatg
     4561 cttacgctga ttcggtcgcg gactggttca aaaacgaatc tattagagaa acctcaattt
     4621 acgacgacac caccgcttca gaatccgccg ccgacgacat aacagtcgcg gacgccatcg
     4681 acgtcattcg ctggtatcaa ttttttatcg ctgtgaaaac ctttcgggcg atcagcggca
     4741 gtgatagctt tgccggccgg gaggtcgaag acgaagcgct gtcgttcgac tgtttcagca
     4801 acgaagccgg agatgacgaa gatgttgact acgatgccgt cctaatgaga agcgcgaaaa
     4861 tggattcaca cggctcagcg aaagtagcgc tggttgccat tgctcgctca acggcggcgt
     4921 ggcggtcgct gcaaatttcg cttcctgaaa aatccgctac aatacaaccg ctcttagttg
     4981 aattggatca gttgcggcga tcgctggagg cgcgattccc gcgcgtgcgc gaatttattc
     5041 ggccgggttt tgacgagctc atcactgaat ttgtcagtta atgaaagatg aaaggcaata
     5101 ttcccatccc cgaactccca ttcgccgaag aagtgtggtt gatggttgcg gtgacctctg
     5161 tgcgcgagcg tcgcacgcaa caagggaaac cgtttcgcga cgccaacgcg cgcaatgcga
     5221 ccggtaatct gctgttgaaa atc
//
LOCUS       DATDBY010000432         2420 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1891779, whole genome shotgun sequence.
ACCESSION   DATDBY010000432 DATDBY010000000
VERSION     DATDBY010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1891779"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2405)
                     /locus_tag="VIT19_08130"
     CDS             complement(<1..2405)
                     /locus_tag="VIT19_08130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838987.1"
                     /translation="MFNRAPHEIARVICEEPPAPLSIIITRPHDLLPSGNEATTLENI
                     YLARGASVEILRRDLSGVLEDIVSRALRKEPQWRYPSAAQLGEDVASFLEGRPLSSLP
                     DAPYAGQMRPSPASSDTALAVLPLKLIEVPGGSDSGSDYLGAGLTDALITRLSSIQRF
                     AVRPTSSVLRYSAEADPLQAGRELGVAFVLDGRVRHSGERIRVTLQLLDVNDGTTAWA
                     GQFDENFTDVLTLEDTISSHVAEAIVPHLTADEKLKLAKRGTNDPLAHEAYLRGRSYW
                     NKFTEDGFAKAIVCYHQATAIDPDYAVAHAAIAEYYNWLGIYSVLPSNECGVAAYEAA
                     AKAVAIDPLLAEAHCALGQAKLCRDFAWDGAERQLFRAIELNPNYAPARTWYAFQLAM
                     EGRFTEASREAQAAALLDPFSLITRFCRVWCLYHARQFEAALELCREYLTADPENLML
                     VYMSSFMLSAQGQHEQAIANAERCVASVGKASRTLGRLGTAYAEAGQLEQAEGILKEM
                     GEIAGRRFISPYHIALVHCALGRIEAALEMLERAVEVKDAWVLYAAVDPELDSLHGHP
                     RFDALLRKLNHRLAALPTLPIETHLGQESIAVLPFKILTQPTENTGDEYLGIGLADAL
                     ITRLSNVRRLVVRPTSSVMRYRGVAVDPLVAGRDLHVEYVIDGSLRRVGERLRVTAQL
                     MNVAEGVTSWADQFDEESQDVLQIEDSISERVTTALLPQLTGDDRVQLSKRGTVNPKA
                     FEWYLRGRYHWNTYTESGLARAIECYHHAIKLDPNYALAYTGIADYYNWLGVFGVKSF
                     DECT"
BASE COUNT          495 a          761 c          707 g          457 t
ORIGIN      
        1 gtacattcgt cgaacgactt tacgccgaac acgccgagcc agttgtagta gtcggcgatg
       61 ccggtgtacg ccagcgcata gttgggatcg agcttgatgg cgtggtggta gcattcgatc
      121 gcccgcgcca atcctgactc agtgtacgtg ttccagtgat accgaccgcg caaataccat
      181 tcaaacgctt tcggatttac ggtgccgcgt tttgaaagct gcacgcgatc gtcgccagtc
      241 agttgcggca acagcgccgt cgtcacgcgc tcagagatag agtcttcgat ttgcagcacg
      301 tcctgcgatt cttcatcgaa ctggtcggcc caactggtga cgccttcggc aacgttcatc
      361 agttgcgccg tcacgcgcaa gcgctcgccg acgcgacgta aacttccatc gatgacgtac
      421 tcgacgtgca gatcgcggcc ggctaccagc gggtcaaccg ccacgccgcg atagcgcatg
      481 acgctgctcg tcggccgcac caccaatctc cgcacgttgc tcagacgggt gatgagcgcg
      541 tccgccaagc ctatgccgag atactcgtcg cccgtgtttt cagtcggttg cgtcagaatc
      601 ttgaacggca acaccgcgat ggactcctgc ccgaggtgcg tttcaatcgg cagcgtcggc
      661 agcgccgcga ggcggtgatt cagcttccgc agcaaagcgt cgaaccgcgg atggccgtgc
      721 agactgtcca actcaggatc aaccgcggca taaagaaccc aggcgtcttt gacttctacc
      781 gcgcgctcga gcatctcgag ggcggcttca atgcgaccca gcgcgcaatg aaccagcgcg
      841 atgtgataag gcgagataaa gcgacgtccg gcaatttcac ccatctcttt caaaatgcct
      901 tcggcttgct cgagctggcc ggcttcggcg tacgccgtgc cgagccgccc cagagtgcgc
      961 gacgcttttc ctactgaagc gacgcagcgc tcagcgttgg caatcgcttg ttcgtgctgg
     1021 ccctgcgcgc tcaacatgaa gctggacatg tagaccaaca tcaggttttc ggggtccgcg
     1081 gtcagatact cacggcacag ctcaagcgcc gcttcaaatt gacgcgcgtg gtagagacac
     1141 caaacccggc aaaagcgcgt gatgagtgaa aaggggtcaa gcaaagctgc cgcctgcgcc
     1201 tcgcgcgagg cctcagtgaa ccgcccttcc atggccagtt gaaacgcata ccaggtgcgc
     1261 gccggcgcat aattcggatt cagttcaatg gcgcggaaga gttgtcgttc ggctccgtcc
     1321 caggcaaagt cgcgacaaag tttcgcctgg cccagcgcgc agtgagcttc agccagaagc
     1381 ggatcgatgg cgaccgcctt cgcggctgcc tcataggcgg ccaccccaca ctcattcgaa
     1441 ggcagaacag aataaattcc gagccagttg taatactcgg cgatggccgc gtgcgctacc
     1501 gcgtaatccg gatcgatggc cgtcgcctgg tgatagcaaa caatcgcctt cgcaaagccg
     1561 tcttccgtga acttgttcca gtaagagcgt ccgcgcagat acgcctcgtg cgccagcgga
     1621 tcgttcgtgc cgcgcttggc cagcttcaac ttttcgtccg cggtcaggtg cggcacgatc
     1681 gcttcggcga cgtgcgaaga aatcgtgtct tccagcgtca gcacgtccgt gaagttttcg
     1741 tcgaactgcc cggcccacgc tgtcgtgccg tcattgacgt cgagcaactg caaagttacg
     1801 cgaatgcgct cgcccgagtg acgaacccgc ccgtcgagca cgaaggcgac gccaagttcc
     1861 ctgcccgcct gtaagggatc agcttccgcg ctgtaacgaa ggacgctgct cgtcggccgc
     1921 accgcaaatc tttgaattga gctcagccgc gtaatcagcg cgtcggtgag ccccgcgccc
     1981 aggtagtctg aacctgaatc ggagccaccg ggtacctcga tcaacttcaa aggcagaacg
     2041 gcgagcgccg tgtccgacga agccggactc ggcctcattt ggccggcata cggcgcgtcg
     2101 ggaagactgg agagcggccg gccttccaaa aacgaagcga cgtcttcgcc caattgcgcc
     2161 gccgacgggt aacgccactg cggttctttc cgcaacgcgc gcgacacgat gtcttccagg
     2221 acacccgaaa ggtcgcgacg caaaatctcg acgctggcgc cgcgcgcgag ataaatattc
     2281 tcaagcgtcg tggcctcgtt tcctgagggc agcagatcgt gcgggcgcgt gatgatgatg
     2341 ctcaaaggcg ccggcggctc ttcacaaatc acccgcgcaa tttcatgtgg cgcgcgattg
     2401 aacaaacgat agggccgatg
//
LOCUS       DATDBY010000433         2189 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1499398, whole genome shotgun sequence.
ACCESSION   DATDBY010000433 DATDBY010000000
VERSION     DATDBY010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1499398"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1584)
                     /gene="groL"
                     /locus_tag="VIT19_08135"
     CDS             complement(<1..1584)
                     /gene="groL"
                     /locus_tag="VIT19_08135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006779552.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEY5838988.1"
                     /translation="MAKQVVHGEDSRAAILRGINQLADAVKITLGPKGRNVVIEKKFG
                     SPTITKDGVTVAKEIELKDALENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREG
                     VKTVAAGANPMALKRGIDKAVEKAIAEIQRMAKPVKGDMIAQVGTVSANGDSTIGNII
                     AEAMDQVGKDGVITVEESKTMETALEVVEGMQFDRGYLSPYFVTDPERMEVSLETALI
                     LIHEKKISSMKDLLPLLEQVAKMGKPMLIIAEDVEGEALATLVVNKLRGTLNVAAVKA
                     PGFGDRRKAMLEDIAILTGGKVISEDLGIKLENVQLSDLGRAKKITIDKDNTTIVEGA
                     GKPADIEGRVKQIRAQVEETSSDYDREKLQERLAKLVGGVAVIKVGAATETEMKEKKA
                     RVEDAMHATRAAVEEGIVAGGGVTLVRAAKALEDAKSVIGKGSDPDEQIGVGIVRRAL
                     EEPLRQIVQNAGREGAVVVERVRSEKNENVGFNAATEEYEDLVKAGVIDPAKVTRTAL
                     QNAASIAGLMLTTEAMVSEI"
     gene            complement(1626..1940)
                     /gene="groES"
                     /locus_tag="VIT19_08140"
     CDS             complement(1626..1940)
                     /gene="groES"
                     /locus_tag="VIT19_08140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013941457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEY5838989.1"
                     /translation="MNIRPLHDRVIVRRIEEGEQMRGGIIIPDTAKEKPQEGEVVAVG
                     EGKYRDDGTRQTLDVQPGDRVLFGKYSGSEVKLDNEEFLIMREDEILGIIQRAAAGKK
                     GK"
BASE COUNT          382 a          667 c          563 g          577 t
ORIGIN      
        1 aatctccgat accatagctt cagtggtgag catcaggccg gcaatcgatg ccgcgttctg
       61 caaagcagta cgcgtcactt tcgccggatc gatgacgccg gctttcacca ggtcctcgta
      121 ctcttcagtc gcggcattaa agcccacgtt ttcgttcttc tcgctgcgaa cgcgttcgac
      181 gacgacggcg ccttcacggc cggcgttctg aacgatttgc cgcaagggct cttcgagcgc
      241 gcgcctcacg atgccaacgc caatttgctc gtcagggtca ctgcccttgc cgatcacact
      301 cttagcgtct tccagggcct ttgccgctct aaccagggta acgccgccgc cggcgacaat
      361 accttcttcg acagccgcgc gcgtcgcgtg cattgcgtct tcaacgcgag ctttcttttc
      421 cttcatctcg gtctcagtcg ccgcgccgac tttgattacc gccacgccgc cgaccagctt
      481 cgccaggcgc tcctgcagtt tctcgcgatc gtaatcagac gacgtctctt cgacttgagc
      541 ccgaatctgc ttcacgcgcc cttcgatgtc cgccggcttg ccggcgcctt cgacaatcgt
      601 cgtgttgtct ttgtcgatag tgattttctt ggcgcgtccc aggtctgaaa gctgaacatt
      661 ctcgagtttg ataccgagat cctcgctgat gactttgccg ccggtgagaa tcgcgatgtc
      721 ttcgagcatt gccttgcggc gatcgccaaa gccgggggcc tttaccgccg cgacgttaag
      781 cgtgccgcgg agtttgttga cgaccagcgt cgccagcgcc tcgccctcga cgtcttcggc
      841 gatgatcagc attggtttgc ccatcttcgc gacttgttcg agcaagggaa gcaggtcctt
      901 catcgagcta atctttttct catgaatcag aatgagcgcg gtttcgagcg acacttccat
      961 gcgttccgga tcggtcacaa agtacgggct gagatagccg cggtcgaact gcataccttc
     1021 gacgacttcg agagcggttt ccatcgtctt ggattcttcg acggtgatca cgccgtcttt
     1081 gccgacttga tccatcgctt cggcgataat gttgccgatg gttgaatcgc cgttggccga
     1141 aaccgtgccg acttgcgcaa tcatgtcgcc cttcacgggt ttcgccatgc gctgaatttc
     1201 cgcgatggcc ttttcgacag ccttgtcgat gccgcgctta agcgccatcg ggttagcgcc
     1261 ggcggccacg gtcttcacgc cttcgcggta aatcgcttgc gccagaacgg tggccgtcgt
     1321 ggtgccatcg ccagcgacgt ccgacgtctt tgacgcgact tcgcgaacca tctgcgcgcc
     1381 catattctcg agcgcgtcct tcaattcaat ctctttggcg actgtcacgc cgtctttcgt
     1441 aattgtcggc gagccaaatt tcttttcgat cacaacgttg cggcccttag ggcccagcgt
     1501 gattttcact gcgtcagcga gttgattgat gccgcgcaaa atcgccgcgc gcgaatcctc
     1561 gccatgaact acttgctttg ccatttcgtt ttcttctcct gattagattc gttgttattg
     1621 cggccttatt tgcctttttt gcctgccgca gcgcgctgga tgatccccag gatctcgtcc
     1681 tcgcgcatga ttagaaactc ttcgttatcg agtttgactt ccgaaccact gtattttccg
     1741 aacaacaccc gatcaccggg ctgcacgtcc aaagtctggc gcgtaccgtc atcgcgatac
     1801 ttgccttcgc ccacggcgac gacttcgcct tcctgcggtt tctctttcgc ggtatcgggg
     1861 atgatgatac ccccgcgcat ctgctcgccc tcttcaatgc ggcgtacgat cacgcggtca
     1921 tgaagcggtc tgatattcac tgccattgct gactaatctc ctttttctgc tcagttttga
     1981 gcacgatcgt gctcagaaat tcttacctgt tgatttgcga ttctggcaaa cctgaaagat
     2041 gagtgctaaa gagcaatata agaatggcga cgcccgttgt caaccgaggt taggcaacag
     2101 aatgccggtt tagttgagac tagacggccg agctagtgaa gtttcgaacg ctttttgccg
     2161 ttcgtgtaga cgagttgatg tttgcgctc
//
LOCUS       DATDBY010000434         3053 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_415638, whole genome shotgun sequence.
ACCESSION   DATDBY010000434 DATDBY010000000
VERSION     DATDBY010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3053
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415638"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2253
                     /locus_tag="VIT19_08145"
     CDS             <1..2253
                     /locus_tag="VIT19_08145"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEY5838990.1"
                     /translation="VNGIVVNSRDITDRKRLERRLMMQYQTARILAESPSLDSAGPKL
                     LQAICESLGWDLGQIWIVDPEADVLRWLTSWHSPAVSVTEFQEASRGRPFPRGVGLPG
                     RVWAGGAAGWFSDLAADQGFTRAELAARAGLQSAFAFPINLGEEVFGVMEFFTRDPQT
                     EDPTLLEVMTAIGNHVGQFLERRHAEEQREQIYAREQRARLELETAMNRMRQVQTVTE
                     VALSYLSLDKLLAELLERVCESMDVDTVVILLREEDDHLVAWAAKGLEIDLGIRVPIG
                     AGFAGRVAAEKAALAIDDTETAELFTPFLREHGVKCLLGVPLLIEGRVLGVIHVGRLT
                     HRPFSEDDTRLLQLVAFRVALAIDNARLFEEERAARREAEAANRAKDEFLTTLSHELR
                     TPLTPVIGWIHMVRTGMLPKQQLEHGLSVIEKNAHALKRLINDLLDMTAILSGKMRME
                     ELPVHLGQVVHEAIETVRPFAATRQINVEGTFRNWNDEIVIGDTTRLGQVFANLLHNA
                     VKFSSAGGTIRVACATDGHDAVVSVTDDGEGIAPEFLPRVFEKFVQADGSKTRSHGGL
                     GLGLALVKSFVESHGGTVTAESAGLGHGSRFTVRLRRKEAGEVSPVIAKQTTGPLAKP
                     AGAHILIVEDDEDTLELLQSTFKAKGFRVTTCQSAPEALEIAPQNSIDLILSDIGMPH
                     MDGFEMMKKLRELPNMHNVPAIALSGYATTKDTRMALAAGFNAHVSKPIEPAELLKTT
                     SRLLKKRLNP"
     gene            2425..>3053
                     /locus_tag="VIT19_08150"
     CDS             2425..>3053
                     /locus_tag="VIT19_08150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838991.1"
                     /translation="MLPPGMFRGAISKLSLRKKLVILASAGVFVPLLVLTYMQYRSLA
                     ELENKTKGAFKDNLRQGFTLLQRQMKQRLEDVAAQTLKPVGAINFSSAGGAEDTKEYF
                     ANVRRSHPEIEEIFVFVHQQGQEETNSYAYLYSGKFVRIARPQFTATQSHILSQFEKA
                     QMAESFLDANRNYLFAHDSCPTCSPTIRTGAYLFYPLHDPTRDLAKGGQ"
BASE COUNT          676 a          840 c          927 g          610 t
ORIGIN      
        1 gtaaacggaa tcgtcgtgaa ttcgcgcgac atcacggatc gcaagcggct cgaacgcaga
       61 ttgatgatgc agtatcagac ggcgcggata ctcgcggaat cgccttcgtt ggacagcgcc
      121 gggccaaagt tgctgcaggc aatttgtgaa agcctggggt gggatttggg ccagatttgg
      181 attgtcgatc cggaagcaga cgtcttgcgg tggctgacca gttggcacag cccggcggtt
      241 tccgtcactg aatttcagga agccagtcgc gggcggcctt tcccgcgcgg cgtcggcttg
      301 cccgggcgtg tctgggccgg cggtgcggcg ggttggttca gcgatcttgc cgcggatcaa
      361 ggcttcaccc gcgcggaatt ggcggcgcgc gccggtctgc agtcagcctt tgcctttccg
      421 atcaacctgg gcgaagaagt tttcggcgtg atggagttct tcacgcgcga tccccaaacc
      481 gaagatccca cgctgctgga agtgatgacc gcgatcggga atcacgtggg tcagtttctc
      541 gaacgccggc acgccgaaga gcagcgcgag caaatttacg cgcgtgagca gcgggcgcgc
      601 ctcgaacttg aaacggccat gaaccgcatg cggcaggtgc agacggtaac ggaagtagcc
      661 ctctcgtatt tgtctttgga caagttactt gcggagttgc ttgagcgcgt ctgcgagtcg
      721 atggatgtgg acacggtcgt gattctgctg cgcgaggaag acgaccacct ggtcgcatgg
      781 gccgccaaag gtttggagat cgatctgggg attcgcgttc cgatcggcgc aggattcgcc
      841 gggcgtgtcg ccgcggaaaa ggcggcgctg gcgatcgacg atacggaaac cgcggaattg
      901 ttcacgccgt tcctgcgcga gcacggcgtg aagtgcctgc tcggcgttcc tttgctgatc
      961 gaaggacgcg tgctcggcgt aattcacgtc ggcaggctta cgcaccgccc gttctcagag
     1021 gatgacacgc ggctgttgca gttggtggcg ttccgtgtcg cgctggcgat cgacaatgcg
     1081 cggctgtttg aagaagagcg ggccgcgcgc cgcgaagccg aagccgccaa ccgcgcgaaa
     1141 gacgagtttt tgacgacgct ttctcacgag ctgcgtacgc cactgacgcc ggtcatcggc
     1201 tggattcaca tggtgcgcac cgggatgctc cccaagcaac aactggaaca cggactgagc
     1261 gtaattgaaa agaacgcgca cgcgctgaag cggctgatca acgatttgct cgacatgacc
     1321 gcgattctca gcggcaagat gcgcatggaa gagctgccgg tccatctcgg ccaggtggtg
     1381 cacgaagcga tcgaaacggt gcggccattt gccgcaacgc gccagatcaa tgttgaagga
     1441 acgtttcgta attggaacga cgagatcgtg ataggcgaca caacgcggct cggccaggtg
     1501 ttcgcgaacc tgctgcacaa cgccgtgaag ttttcatcgg cgggcggaac gatacgggtg
     1561 gcgtgcgcga ctgacggtca cgatgcggtt gtcagcgtta ccgacgatgg cgaaggcatc
     1621 gcgccggaat tcttgccgcg cgtgttcgag aaatttgtgc aggccgacgg ctcgaagacg
     1681 cgcagccacg gaggcctcgg gctcggcctg gcactggtca agagttttgt tgagtcgcac
     1741 ggcggcacgg tcacggcaga aagcgctggc ctcggccatg gtagtcgttt cacagttcga
     1801 ctaaggcgca aggaagcagg cgaagtttcc ccggtcatcg ccaaacaaac taccggtcca
     1861 ttagcaaaac cggccggcgc gcacattctg atcgttgaag acgacgaaga cacgctcgaa
     1921 ctgctgcaat cgacttttaa agcgaagggt ttccgcgtga cgacttgcca gtcggcgcct
     1981 gaggcgctgg aaatcgcgcc gcagaattcc atcgatctaa tattgtcgga tatcggcatg
     2041 ccgcacatgg acggcttcga gatgatgaaa aaactgcgcg agctgccgaa catgcataat
     2101 gttccggcca tcgctctgag tggatatgca acgacgaagg acaccaggat ggcgcttgcc
     2161 gcgggcttca acgcgcacgt ctcaaaaccg atcgagccgg cggagttgtt gaagacgacc
     2221 agtagacttc tgaagaaacg cctcaatcca taacccgaag tagttgctcc cgcgccccgg
     2281 gctaatctca cccgacaacc aaaaccggaa ttgttcccac cagcgctaag gactagctga
     2341 gagcagtcac ggacatccca atggccatga caacttatta caactcggtg cgaacgagta
     2401 cagctctggg gagaatctcg atgtatgcta ccgcccggta tgttccgagg tgcaatcagc
     2461 aaactatcgc tgcgaaaaaa gctggtgatc ctggcatcag caggggtgtt cgttcctctt
     2521 ctggtgttga cctacatgca gtatcgatca ctcgccgaac tcgagaacaa aaccaaaggc
     2581 gcattcaagg acaacctgcg acagggattt acccttctcc agcggcaaat gaaacaacgc
     2641 ctggaggacg tcgcggccca aactctgaaa ccggtcggcg ctatcaattt ttcgtccgct
     2701 ggcggcgcgg aagatactaa agagtatttt gccaacgtca ggcgttcgca tcccgagatt
     2761 gaagagattt tcgttttcgt ccaccagcaa ggtcaggagg aaacaaatag ttatgcctat
     2821 ttgtattcag gcaaatttgt gaggatcgcg cggccacaat tcaccgccac gcaatcgcac
     2881 attttgtctc aatttgaaaa ggcgcagatg gccgagagtt ttcttgacgc taatcgcaac
     2941 tatttgttcg cccatgattc ctgtccgaca tgttcgccta ccatccgtac gggagcatat
     3001 ctgttttatc ccttgcacga cccaaccagg gatttggcaa aaggagggca gca
//
LOCUS       DATDBY010000435         2155 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2699478, whole genome shotgun sequence.
ACCESSION   DATDBY010000435 DATDBY010000000
VERSION     DATDBY010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2155
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2699478"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..457
                     /locus_tag="VIT19_08155"
     CDS             <1..457
                     /locus_tag="VIT19_08155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838992.1"
                     /translation="PIMASKLLRLLLLLPFILVVFITERSASAPALPNPILYLTSIEP
                     HQAGGKQFLRYRYDVFNKDAYPADFFAASPSLPPCGKNTKAARTWVDVYDQSGKRLQG
                     FCAFSKPADLSSIWFAVEVGTVPPSWVYIELTDRQTNTKYKSNLADTVE"
     gene            549..1913
                     /gene="mgtE"
                     /locus_tag="VIT19_08160"
     CDS             549..1913
                     /gene="mgtE"
                     /locus_tag="VIT19_08160"
                     /inference="COORDINATES: protein motif:HMM:TIGR00400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEY5838993.1"
                     /translation="MPQKDLHKLLERIHLRLDESSVGISHQLAHLDAADLAELLNQLL
                     LAEAATVISMLPIPRVIELFDHSEMRRRAAILEQLEPERVAQILEGLSADERTDVIQR
                     MSLHDCHRVLPKLNPEIRKELEGLLQYPAHTAGGIMTTEFVRLDSKLTVAEALKHIRA
                     VAREKESIYACYVLAEKTNELLGAVSLRDLVMAELTAPVTEVMRRKPVTVNALDDQEL
                     VAKKIAKYNLLAVPVLEKDGSVVGFVTVDDVIDVLVEEQTEDILRMAGVEPGALDKPY
                     FDNPISRVVRKRIGWLLLLFVAGTMTSAVLHRFEDELATVVALSFFIPLLIGTGGNAG
                     AQTVMTVIRSLALGEIGMSHAWRVVLREASTGMIVGLLVAPIAFVQALIWQVPIALAL
                     TVAVTMLAICLWSTTVGALVPIVAERFGVDPAVLSAPLITTLVDATGLVIYFSIAKII
                     LQQI"
     gene            1910..>2155
                     /locus_tag="VIT19_08165"
     CDS             1910..>2155
                     /locus_tag="VIT19_08165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838994.1"
                     /translation="MKIGDTISWTRSFTEDDIRLFNRVSGDEGIHHVTPDEQGRLMVH
                     GLLTATIPTKIGGDMNFIAREMKFQFYRPVFAGDTITC"
BASE COUNT          449 a          601 c          632 g          473 t
ORIGIN      
        1 cccgatcatg gcttccaaat tactaagact gctcttactg ctgccgttca ttctggtcgt
       61 gtttattaca gaacggtccg ccagcgcgcc tgcactaccg aatccaatcc tttatttgac
      121 gagtatcgaa cctcaccaag ccggaggcaa gcagttctta cgttacagat acgacgtctt
      181 caacaaagac gcgtatccag cagatttctt tgccgcttcc ccgagtttgc cgccctgcgg
      241 aaagaacacc aaagctgcgc gcacatgggt ggacgtctac gaccaaagcg gcaaacgcct
      301 tcaaggcttc tgcgcgttta gcaagcctgc cgacctgagc agcatttggt ttgccgtcga
      361 ggtagggacc gtgccgccga gctgggtcta catcgaacta accgatcgcc aaaccaacac
      421 caagtacaaa tctaatctgg ccgatacggt ggaatagttc cgcaaagaat ctgtttgccc
      481 cgagctttgc accgcgtatg atgcaacgct caaacttatt cgtgtcttcg gcaaactgga
      541 ggtgactcgt gcctcaaaaa gacctgcaca aacttctgga gcggatccat ctgcggctgg
      601 atgaaagctc ggtcgggatt tcgcaccaac tggcccatct cgacgcggcc gatttggctg
      661 agttgcttaa ccagttgctg ctggctgagg cggcaacagt catctcaatg ctgcccatcc
      721 cgcgtgtgat cgaacttttc gatcattcag agatgcgccg ccgcgcggcg attctggaac
      781 agctggagcc ggaacgggtc gcgcaaattt tggaaggcct ctcagcggac gaacgcacgg
      841 acgtcatcca gcggatgagc ctgcatgact gtcatcgagt cctaccgaaa ctgaacccgg
      901 aaatccgcaa agagctggaa ggcttgcttc aatatccggc gcacacggcg ggcggcatca
      961 tgaccaccga gtttgtgcgg ctcgattcga agttgacagt cgccgaggcg ttgaaacaca
     1021 tccgcgcagt cgcgcgcgag aaggaatcga tttacgcgtg ctacgttctg gctgagaaaa
     1081 caaacgaact gctgggggcg gtttcgttgc gtgatctggt gatggctgag ctgactgcgc
     1141 ccgtgaccga agtgatgcgg cgtaagcctg tgaccgtgaa tgcgctcgac gatcaggagc
     1201 tggtggcgaa gaagatcgcg aagtacaacc tgctcgccgt gccggtgctg gagaaggacg
     1261 gcagtgtagt cggcttcgtg accgtcgatg acgtgatcga cgtgctggtc gaggagcaga
     1321 cggaagacat tttgcggatg gccggcgtcg aaccgggggc tctggacaag ccttacttcg
     1381 acaatccgat tagtcgcgtt gttcgcaagc gaatcggttg gctgctgctt ctgttcgtcg
     1441 ccggcaccat gaccagcgcc gtgctgcatc ggttcgaaga tgagctggcc acagtcgtgg
     1501 ccctgtcgtt cttcattccg cttttgatcg gtaccggcgg gaatgccggc gcccaaacag
     1561 taatgacggt gattcgcagc ctggccctgg gcgaaatcgg catgagtcac gcctggcggg
     1621 tggttctgcg cgaggcttcg acgggaatga ttgtgggact gctggtcgcg ccgatcgcgt
     1681 ttgtgcaggc gttgatttgg caggtgccaa tcgcgctcgc gctgaccgtg gcggttacga
     1741 tgctggcgat ttgtctctgg tcaacgacgg ttggagcttt ggttccgatc gttgccgaac
     1801 ggttcggggt ggatccggcc gtcctctctg cgccgctgat taccacactg gtcgatgcga
     1861 cgggcctggt aatttacttc tcgatcgcaa aaatcatcct gcaacagata tgaagatcgg
     1921 cgacacgatt tcctggacac gctcctttac cgaagacgac attcgtttgt tcaatcgcgt
     1981 ctccggcgac gaagggatcc accatgtaac gcccgacgaa caggggcggt tgatggttca
     2041 cggcctgctg acggcgacga tccccaccaa gattggcggc gacatgaact tcatcgcccg
     2101 cgaaatgaaa tttcagtttt atcgcccggt gtttgccggc gacacgatca cctgc
//
LOCUS       DATDBY010000436         3506 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2899144, whole genome shotgun sequence.
ACCESSION   DATDBY010000436 DATDBY010000000
VERSION     DATDBY010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3506
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2899144"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VIT19_08170"
     CDS             complement(<1..255)
                     /locus_tag="VIT19_08170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5838995.1"
                     /translation="MITGYNTDVEHNGVVYHVQTEDKGLRTPLILSLVYTGGAILASK
                     RSAYDDLIASGFEEKVLVERLERQHKLICAAVHAGRIEELK"
     gene            547..1026
                     /gene="ndhC"
                     /locus_tag="VIT19_08175"
     CDS             547..1026
                     /gene="ndhC"
                     /locus_tag="VIT19_08175"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEY5838996.1"
                     /translation="MSFNLADYLPVLLMFVVAAGFAVTMVGLSQLVGQRKRTRTKLMP
                     YECGKDPVGSARERFSVKFYLIAMIFILFDIEVIFLIPWAVVFRTLSSPQYGLANLIF
                     FEMIIFITLLAAGLVYVIKKGALDWGERARREAEAEARLLDTVSSSKFQVSSRSKAA"
     gene            1062..1691
                     /locus_tag="VIT19_08180"
     CDS             1062..1691
                     /locus_tag="VIT19_08180"
                     /inference="COORDINATES: protein motif:HMM:NF005012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HEY5838997.1"
                     /translation="MGLENVIAEALPEVLTTRLDSLINWARKSSLWPATFGLACCAIE
                     MMNVTSSRNDLARFGAEVFRASPRQADVMIVSGRVSRKMAPVLRRIYDQMPEPKWVIS
                     MGACATSGGVFDNYAIVQGVDKVVPVDVYIPGCPPRPEMLIHAVIMLQEKVMKESVRD
                     RRDAQEDEAREAITPGTLPVTDGSTLNQPERIQPQPYTIASTHEKRRSF"
     gene            1717..2256
                     /locus_tag="VIT19_08185"
     CDS             1717..2256
                     /locus_tag="VIT19_08185"
                     /inference="COORDINATES: protein motif:HMM:NF012549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEY5838998.1"
                     /translation="MSELQQPEHPPAQISEPNNNHRPSQIAEALQRDHPEWVSEIVNA
                     LGETTIIVPREHIVEACSLLKTTPGLDFDLLADVCGFDRGPEEEPRFEVNYHLFSTTR
                     HHRLRLKVVLNEEDPRVQTVTGVWRTANWHERETYDLFGVIFDGHPDLRRILLPEDWQ
                     GHALRKDFPLRGYEPYSLT"
     gene            2319..>3506
                     /gene="nuoD"
                     /locus_tag="VIT19_08190"
     CDS             2319..>3506
                     /gene="nuoD"
                     /locus_tag="VIT19_08190"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HEY5838999.1"
                     /translation="MSVSTANIPPQFEVVDRPLDSQMTISMGPQHPSTHGVLRLELVL
                     DGESVVKATPDIGYLHTGMEKLFEYRKYQQGIVITDRMDYLNPLGNNLAYVMAIEKLL
                     QIEIPERAQVIRVMMCELQRIASHLVWLATHALDLGAMTVFFYCFREREKIMNLIEAA
                     SGGRLTPSYFRVGGLMMDLPAGFERRVQQFQNDLPNALDEFNTLVTGNRIFQKRTQGI
                     GYISAEDAIDWGLAGPILRGSGVALDVRRANPYTGYETYDFEIPVEHDGDVWARYLVR
                     MREMRESHKIVQQALARLKPGPVKADAPKVVLPDREAMKRHMDALIHHFLLVAEGVDV
                     PPGEVYHPIEASKGELGVYIKSTGGPKPARVHFRGPSFVNLSALPHMARGAMIADIVA
                     IIGS"
BASE COUNT          753 a          957 c         1004 g          792 t
ORIGIN      
        1 ctttagctct tcgatgcggc cggcgtgcac ggctgcgcag atcagtttgt gttggcgttc
       61 caggcgctca accagcactt tttcttcgaa gccgcttgcg atcaaatcat cgtaggcaga
      121 acgcttgctg gcgagaatcg cgccgcccgt atacacgagc gacagtatca acggcgtccg
      181 caaacctttg tcttcggttt gcacgtgata gacgacgcca ttgtgttcga cgtctgtgtt
      241 gtagccggta atcacttgct ggtcagttgc tcaggttctt cggttgcgat gcatgcgcat
      301 ctaacatcaa tcggacggta gcacagcgat ttttggacgg tcaatcatcg gccaatgatc
      361 gcgatttcaa acttgagaat acggcagatt gatcgcttga cacccctctg acgcagcatt
      421 aggatgaggc ttgtacaatg attctcaagc actcgggcgg caaagcgcca agagcgaagg
      481 gccaagtgtt aatgcctttc gttcagcttc tctttgcact ttgcccttag ctctttgctc
      541 tacgagatga gtttcaatct agctgactat ctgcccgttc ttctcatgtt cgtcgtcgcg
      601 gcgggattcg cggtgacgat ggtggggttg tcgcagctcg tcggccagcg caagcgcaca
      661 cgcacgaagc tgatgcccta cgagtgcggc aaagatccgg tcggctcagc gcgtgaacgc
      721 ttctcggtca agttctacct catcgcgatg atcttcatcc tgttcgatat tgaagtcatc
      781 tttttgattc cgtgggcggt ggtgttccgc acgctttcat cgccacagta cggactggct
      841 aatctgattt tcttcgagat gatcattttt atcactctgc tcgcggcggg tttggtctat
      901 gtgatcaaga agggcgcact ggattggggc gagcgcgcgc gccgcgaggc tgaggcggaa
      961 gcgcgattgt tagacacagt ttcaagttcc aagttccaag tctcaagtcg gtcaaaggca
     1021 gcttaacttg gaacttgaaa cttgaaagct gaaactgatt tatgggactc gaaaatgtca
     1081 tagctgaagc gctgcctgag gtgctgacga cgcgccttga ttcgctgatc aactgggcgc
     1141 gtaagtcttc gctctggccg gcgacgttcg gcctggcctg ctgcgcgatc gagatgatga
     1201 acgtcaccag ttcgcgaaac gatctggccc gctttggcgc ggaagtcttt cgcgcctcgc
     1261 cgagacaagc ggacgtaatg attgtctccg ggcgcgtttc cagaaagatg gccccggtgc
     1321 ttcggcgaat ctacgatcaa atgcctgagc caaagtgggt aatttcgatg ggcgcgtgcg
     1381 cgacgtcagg cggcgtcttc gacaactacg cgatcgtcca gggcgtagac aaggtcgttc
     1441 cggttgacgt ttacatcccc ggttgccccc cgcggcctga gatgttgatt cacgcagtaa
     1501 tcatgctcca ggaaaaagtg atgaaagaat cggtgcgcga tcgtcgcgac gctcaggaag
     1561 atgaagcgcg cgaagcgatc accccgggaa cgctgcccgt caccgacgga tcaactttga
     1621 atcagcccga aagaattcag ccccaaccgt acacaatcgc ttcgacacac gagaagcggc
     1681 ggtcgtttta gagcttgcgc aaaaggtcaa acgcaaatgt ctgaactgca gcagccagaa
     1741 cacccccccg cgcaaatttc agaacccaac aacaatcaca gaccatcgca gattgcggag
     1801 gcgttgcaac gcgatcatcc ggaatgggtg agcgagatcg taaacgcgct tggtgaaacg
     1861 actatcatcg tgccccgtga gcacatcgtc gaagcgtgca gccttctgaa aactacgccc
     1921 ggcctcgact tcgatttgtt ggctgatgtg tgcggtttcg atcgcggtcc cgaagaagag
     1981 ccgcgcttcg aggtgaacta ccacctgttc tcgacaaccc ggcatcaccg gctgcgtttg
     2041 aaggtggtgt tgaatgaaga agacccgcgc gtacagacag tcaccggcgt ctggcgcacc
     2101 gcgaactggc atgagcgcga aacttacgat ctattcggag tgattttcga tggacatccg
     2161 gacttgcggc gcatccttct tcctgaagat tggcaggggc acgcgctgcg caaggatttt
     2221 ccgttgcgag gatatgaacc gtatagcctg acgtgacccg gtcctatatg tcccagtgtc
     2281 gcgtacgacg cataggacca ataggacgaa tgcgaccaat gagcgtttct accgccaaca
     2341 ttccaccgca attcgaagtc gtcgatcgtc cgctcgactc gcagatgacg atctcgatgg
     2401 ggccgcagca cccttcgacg cacggtgtgc tgcgcctcga actggtgctg gacggcgaaa
     2461 gtgtagtcaa agccacgccg gacatcggtt atctccatac cggcatggag aagctcttcg
     2521 agtatcgcaa gtaccagcaa ggcatcgtca tcaccgaccg gatggattat ctgaatccgc
     2581 tcggcaacaa cctcgcatac gtgatggcga tcgagaagct tctgcaaatc gagatccctg
     2641 aacgggcgca agttattcgc gtgatgatgt gcgaacttca gcgcattgct tcacacctcg
     2701 tctggcttgc cacgcacgcg ctcgacctgg gagccatgac agttttcttc tactgcttcc
     2761 gcgaacgcga aaagatcatg aatctgatcg aggccgcttc cggagggcgt ctcacgccat
     2821 cgtattttcg cgtcggtggt ttgatgatgg acttgccggc gggtttcgag cgccgcgtgc
     2881 agcaattcca gaacgatttg ccgaacgcgc tcgacgaatt caacactttg gtcaccggca
     2941 accggatttt tcagaaacga acgcagggta tcggatatat ctcggcggaa gatgcgatcg
     3001 actggggcct ggcagggccg attctccgcg gcagtggcgt ggcgctggat gttcgccgcg
     3061 cgaatccgta caccggctac gaaacctacg atttcgaaat tccggttgaa cacgatggcg
     3121 atgtttgggc gcgttacctg gtgcgcatgc gcgagatgcg cgagtcacat aagattgttc
     3181 agcaggcttt ggcgcgactt aaacccgggc ccgtgaaagc tgacgcgccg aaagttgtgc
     3241 ttcccgatcg agaagcaatg aagcggcaca tggatgcctt gattcatcac tttctgttgg
     3301 tcgccgaagg tgtggatgtg ccaccgggtg aggtttatca cccgattgaa gcatcgaagg
     3361 gcgaactcgg cgtttacatt aaatcgaccg gtgggccgaa acccgcgcgc gtgcattttc
     3421 gcggaccgag cttcgtgaat ctgtccgctc tgccgcacat ggcgcgcggg gcgatgatag
     3481 cggacatcgt ggcaatcatt ggatcg
//
LOCUS       DATDBY010000437         2213 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_469247, whole genome shotgun sequence.
ACCESSION   DATDBY010000437 DATDBY010000000
VERSION     DATDBY010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469247"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VIT19_08195"
     CDS             <1..315
                     /locus_tag="VIT19_08195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839000.1"
                     /translation="RSPLEFFHFNLAAARREYEASPRLARQFDDFLMRRMHDVTPVKA
                     DVTGDGYAVAQLWSGDWWLRAHATLSSGEEIEWRLPVSLNDRDQSIDLLFENAYERTK
                     KF"
     gene            410..1393
                     /locus_tag="VIT19_08200"
     CDS             410..1393
                     /locus_tag="VIT19_08200"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY5839001.1"
                     /translation="MLALRFQNGALSVSDVPKPVAAGEALVRVTLSGICNTDLEIARG
                     YAGFAGTLGHEFVGVIAEARASARAPFTSESLLAPGQRIVGEINAGCGVCDLCRAGDP
                     RHCPERTVLGIVGRDGAHAEFLKLPPANLLLVPDEIPDERAVFTEPLAAACGILERVS
                     ITEDTRVAVIGDGKLGLLCAQVLATTGAKVTLIGKHRAKLAIAERRGIETNTVEKAQQ
                     RKGEFGVVVEASGSPTGFALAVELLHPRGVLVLKSTFHGATELEAAPLVVNELSVVGS
                     RCGRFAPALELLKQNAIDVDSLISEEFALADGVSAMRRAADRDVMKVLLRP"
     gene            1779..>2213
                     /locus_tag="VIT19_08205"
     CDS             1779..>2213
                     /locus_tag="VIT19_08205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839002.1"
                     /translation="MISLVQASTATPEHKFSTTELVASMMHKLSPELINSICSLGVEN
                     RYSTMDNYADFLMGAPMNQRSSTTQLGVNATRRCIEEWGGDPSQIGLLIAATNTPDQM
                     LPCLASEVMGRTHGLLPRSLATVSMQSQGCSVMLKSVEVAQWY"
BASE COUNT          479 a          622 c          629 g          483 t
ORIGIN      
        1 cgttcgccgc tcgagttctt tcatttcaat ctggccgccg cgcgtcgtga atacgaagcg
       61 tcgccccggc tggcgagaca gttcgatgac tttctcatgc gccggatgca cgatgtaacg
      121 ccggtgaagg ccgatgtcac cggtgacggc tacgcggtgg cgcagctttg gtcaggcgat
      181 tggtggctgc gggcgcacgc gactttgagt agcggcgaag agattgagtg gcgtttaccc
      241 gtctcactca acgatcgtga tcaatccata gatttgttat tcgagaacgc ctacgaacga
      301 acaaagaaat tctgaacgtc aaaaactgta cttagtgctt tgtactttgt gctttgaact
      361 ctgaaggtca caactaagta caaagcacca agtacaaagc acgtatttta tgctcgcact
      421 aagatttcaa aacggcgcgc tgtcagtcag cgatgtgccg aagcctgttg ctgctggcga
      481 agcgctggtg cgcgtgaccc tctcaggaat ctgcaacact gatttggaga tcgcgcgcgg
      541 ctatgcgggt ttcgcaggaa cgctcggcca cgagtttgtc ggcgtgattg cagaagcccg
      601 cgcgtcagca agggcaccgt tcacaagcga gtcgttgcta gctcccggcc agcgcatcgt
      661 cggcgagatc aacgcaggct gcggcgtctg cgatctttgc cgcgcaggcg atccacgtca
      721 ttgcccggag cgaaccgtgc tcggcattgt aggccgcgat ggtgcgcacg ctgaattctt
      781 gaaactgccg ccggcgaatt tactgctggt gcctgatgag atcccggacg agcgcgcggt
      841 gttcaccgaa ccgcttgccg ccgcttgcgg cattctcgaa cgtgtgtcga tcactgaaga
      901 cacacgggtc gccgtgatcg gcgatggaaa actgggattg ctgtgcgccc aggtactcgc
      961 gaccacggga gccaaagtca cactaatcgg aaagcacaga gcgaaactcg ccatcgccga
     1021 gcgtcgtggg atcgaaacga atacggtcga aaaggctcaa cagcgcaaag gagaattcgg
     1081 agtcgtcgtc gaagcatccg gctcgcccac cggcttcgcg cttgcagttg aacttttaca
     1141 tccccgcggg gtgctcgttc tgaaatctac atttcacggc gcgacggaac tagaagcggc
     1201 tcctttggtc gtcaacgaac tcagcgtcgt cggatctcgc tgcggccgct tcgcgccggc
     1261 gctcgaactg ctcaagcaaa atgccatcga tgtggacagc ctcatcagtg aagagttcgc
     1321 gttagccgat ggggtgtcgg cgatgcgccg cgccgctgac cgcgacgtaa tgaaggttct
     1381 gctccggcct tgaaagccgc ctgtaacccc ccaccgagcg ctaaaaagga gtggcaacta
     1441 gataaccact ggttacttcg ttaccacttt ccctcgtcgc cctcagactc aacgatttgt
     1501 cccgtcaaat tgtcttttgc ttagaaaatg tgaaggaagg cctgcgtgtc gcgaaccgtt
     1561 tacttccgcg acgccgtcct caagaattta gtggatagct ggtattcact tcgccccgaa
     1621 tctcacgttc gccaaatcgc acgtccattg ctcgctaaag taacttatca ttgagcttag
     1681 ctcctcatcg gatgatcctg tcggtggtgg cacacgcctt gttaagtaat aggtcattca
     1741 gcagcagttc tcagcagggt tccctaggag taaacacgat gattagcctg gttcaagcaa
     1801 gcaccgccac ccccgaacac aaattcagca cgaccgaatt ggtcgcgtcg atgatgcaca
     1861 agctctcgcc cgagctgatt aactcaatct gctcgctggg cgtcgaaaat cgttattcga
     1921 cgatggataa ctacgctgat ttcctgatgg gtgcgccgat gaaccagaga agttcgacga
     1981 cgcaactcgg cgtgaacgcg acgcgccgct gcatcgaaga atggggcgga gatccttcac
     2041 agattggttt gctgattgcc gcgaccaata cgcctgacca gatgctgccg tgcctcgctt
     2101 ctgaagtgat gggccgcacg cacggtttgc tgccgcgctc gctggcgacg gtcagtatgc
     2161 aatcgcaagg gtgctcagtg atgttgaagt cggtggaagt cgcgcaatgg tac
//
LOCUS       DATDBY010000438         9235 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_625725, whole genome shotgun sequence.
ACCESSION   DATDBY010000438 DATDBY010000000
VERSION     DATDBY010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 9235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9235
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_625725"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..621)
                     /locus_tag="VIT19_08210"
     CDS             complement(<1..621)
                     /locus_tag="VIT19_08210"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5839003.1"
                     /translation="MKILSIIEATTVTGPAKNLLNFCRLLRSPGFCRDGVPQIEVSIV
                     TFDRLSEPRADRGPRAGSPRGVVVTTGSSGSSWVNDPIATAPGSDTAPNAFVAAARDS
                     GITVDIITERFRFDRAVIRQLRDIVARRAPDVIQTHMIKSHFLVKLSGLGKQYPWIAY
                     HHGYTSTDLKMQFYNQLNRWSLPSADLVIAVCGEFAKQLTASGVPKD"
     gene            797..2422
                     /locus_tag="VIT19_08215"
     CDS             797..2422
                     /locus_tag="VIT19_08215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839004.1"
                     /translation="MAVLMRPDTIVTGQNQVRPRRVENSRPRESASQIDPSEIRSELV
                     TYPSAQVAFICGPQLKSNSPANPFPWFDSTQVAQGHVQGREAPRIAPRVLTGVVSVAP
                     NSRMVTGVGTRFRAEVDPRGPAPYYDGWFRIQQGNTWREVKIASVESDTQLTLVSPWR
                     FANANQLKADTYYRNVNQAVWNYDHYARATYYDTALVQYINYYRTRDAAFLNYARRIA
                     DSHWGSAYIDFGTVTEGPNHLPPRSQAFAGLMLRALDDKPEYWDYLYREVRATFDHWL
                     KRNRNNATLYYDIREDGYAQLYAVMLARVLPDRYPLHANGTLKPATGVATDGARKRAA
                     LLADAEDIAVNFFGRLQKSDGSWRWDADVGPAPTDKHRNIEQPFMIGLYLESAILLHQ
                     LSANPTVKANLRDQIVRACRHLYRDTYRATEVVKDMPQYRWRGVWYFWGGGNLANPRA
                     YERGDGDRVTNGDANVIRGVRHLNSTIHHAFGYAHILTGDREFLRMGDEIFGASFGDA
                     TDTLRNLATVGGKEYDMTFRSSGRYLAWRLSRP"
     gene            2659..3660
                     /gene="xrt"
                     /locus_tag="VIT19_08220"
     CDS             2659..3660
                     /gene="xrt"
                     /locus_tag="VIT19_08220"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: protein motif:HMM:NF021254.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0043687 - post-translational protein
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exosortase"
                     /protein_id="HEY5839005.1"
                     /translation="MSVAIQEKFYKPVAIAAALAFVYFAVLMKLSRDWWTDENYSHGL
                     LVPFIIGFIVWQERKRFTEQQRTSALWTGIVCVGFALLALWAGTAGAELFVQRASLLL
                     MLAGIVIYFFGFRIIQVVAVPMLLLALAIPIPQIIFNKIAFPLQLFASKCAVAAMSFF
                     EIPVLRQGNVIELMPLGATEPKRLAVVEACSGIRSLMTLVTLAVVYAYFTRPRDYAGG
                     PPDAGRRPAYRTFGFWRSVILIVSAVPIAILTNAARVSGTGVLAHYYGTKVADGFFHS
                     FSGWVIYLVAAALLFATGWALDRTPRLFGGPGKPTATGKVTRAKVQSKGPALNEAQS"
     gene            3663..4313
                     /locus_tag="VIT19_08225"
     CDS             3663..4313
                     /locus_tag="VIT19_08225"
                     /inference="COORDINATES: protein motif:HMM:NF023410.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EpsI family protein"
                     /protein_id="HEY5839006.1"
                     /translation="MSKSNSKRFWILLVVLLIGGGIINVWERAGEAKISRKSLKEFPS
                     QFGSWRQSGADTRFDAETEKVLRADEYLSRNYESDGRVVSFYAGYYASQRTGATYHSP
                     LNCLPGSGWVMSDGGRIMITASGGRPSFEANRYVIQNGNNRALMVYWYEGRGRPLASE
                     YWGKIYTVIDSVRRRRSDGAMVRIMVPIANSKEEAEKTAVELASQAAPELPAFIPD"
     gene            4662..7058
                     /locus_tag="VIT19_08230"
     CDS             4662..7058
                     /locus_tag="VIT19_08230"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839007.1"
                     /translation="MKNRECRRKFYVLPLFLFLLAAVFVLGACTTPEKAKANHVARGQ
                     ALLKDKKFQEAVLEFRSALQIDDKLAEAHWGLANAYEGLQRYQEAFEEMRATASLDPN
                     HLDVRVKLGNYYLVGAKHSSAALGEAERLAKEVLDKDPNHIEGHILMGGVLFAQDKKQ
                     EAFAELNRAIELNPQRVESYLSLARFHVLTNDIATAETIYQRAISVSGGSAMAHYEYG
                     KFLVGAQRIDEAEAAFQKAIQVEPSNRDARFIIASFYLVNKRLDKAEEAYKALAEIDK
                     DKPEGRSVLGDFYSSVGRLDEAIAIYREVLTKSPDYTQAHYRLAEIMLNRRDIAGAKN
                     EVESVLKNDATDRQALILRARIQMQAGQPNDLKVAIEDLREVLRQEPNSRAGLFFMAE
                     ANFRLGQMDQARVFAGDLERNYPEYLPAKLMQVQINLASGDAKSALKLAAQLQERLAK
                     AAPDRDTSPQMLAELRVKALIAHGSAALQLRDIKTARQDFTAARDAAPHNPDSHVNLA
                     AVALAEGKVDEAIGFYNSALSLDSAHFSSLRGLMNIYTAQRKPDQAHARIDQAIASQP
                     NNASLHFLKGRVYGYEMNAQGAEASFRRALEIDGNYLAAYSALGALFVNTNQQQRAIE
                     EYRKIVERRPDSAAIFTLIGMLEMNLQNIDAAIDNYRKALAIDQNAVFAANNLAWLYA
                     QHGKGNLDEAVRLAQTAVQANPEVPSFVDTLGWVYYKKGLYAAAAEQLKKAATVDENA
                     ARRNNLSPSPTYRYHLGVALAAKGDKAGARREIETALRLAEKSPFPEADEAKKALGTL
                     "
     gene            7106..8722
                     /locus_tag="VIT19_08235"
     CDS             7106..8722
                     /locus_tag="VIT19_08235"
                     /inference="COORDINATES: protein motif:HMM:NF025179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNVR domain-containing protein"
                     /protein_id="HEY5839008.1"
                     /translation="MSTEFRPRKLGEYARIALKRKWMIILPTLAIGLAIGYVVFRLPD
                     LYESTTLIVVKSSTLPNSVVPMITEETLTRELASISQVVTSRSSLQPLVEKYDLYKEE
                     RARGEAMEVIIDDMRKGINVKVNTSRNDITNAFNITYRGRDPKTTQAVAGELASKYID
                     EQTKGTVNAGASAKQFIEEQVRAAKEEVDTIDTQRLAYLQQNINNLPSQSQALVGRLT
                     GLHEEQKALIAEQGRLRDLAAAYRSQLGDITKSHEQEIVLASEGATDPKTTAAWAQLV
                     SRRSDYEGELQVLITQYKEKHPDVVTKKKQIEDIKSQQDQMMNEWKDRIEERRQKLTK
                     LTDPRLLTLRTNISMVEGDMDRQNRLLAETNRQIGELNARINAIPTAEVALQAIDREY
                     ETKKTNYDNLLLQQSKIVVGADAAKEQQGGGIQVVDPANLPEKPVAPKRFVLTAGGFG
                     IGLALGMLLVLIFEVRRLFTIQTIEDAKHYTSLPVLASIPELLTPAEAVAIPRRRSLA
                     LAAGIAAAVVAVPMLAFVLTLTHVFEKITQ"
     gene            8797..>9235
                     /locus_tag="VIT19_08240"
     CDS             8797..>9235
                     /locus_tag="VIT19_08240"
                     /inference="COORDINATES: protein motif:HMM:NF024793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY5839009.1"
                     /translation="MYIEFYGLKELPFALTPDPRYLYFTPSHTEVMANLHYGIESGRG
                     LIVVTGEVGTGKTTLLRWMMQRLDRTVMVAYIFNPRLSVAEFYQYLATLFNIGEWENK
                     SDLLIELGKVLESRHNRGLRTVLVVDEGHGLSTEVLEEIRLLCN"
BASE COUNT         2057 a         2661 c         2681 g         1836 t
ORIGIN      
        1 atctttcgga acgcctgacg ccgtgagttg ctttgcaaac tcgccgcaaa cggcgatcac
       61 cagatcagcc gacggcaacg accaacggtt gagctggtta taaaactgca ttttcagatc
      121 ggtgcttgta tagccatggt ggtaagcgat ccacgggtac tgctttccaa gtccggagag
      181 cttcaccaga aaatgtgact tgatcatgtg cgtttgaatg acatcgggcg cgcgtcgcgc
      241 aactatgtcc cgcaactgcc tgatgactgc gcgatcaaat cgaaagcgtt cggtaattat
      301 gtcgaccgtg atgccagagt cgcgggccgc tgcaacaaaa gcattaggcg ctgtgtcaga
      361 acccggagcg gtagcgatgg gatcattgac ccaactggag ccagaagatc cggtcgtaac
      421 caccacccca cgcgggctgc ccgcgcgggg accccggtcc gctcgcggtt ctgacaatcg
      481 atcaaaggtc acaattgaga cttcgatctg cggaactccg tcccggcaga acccgggcga
      541 acgcagcagg cggcagaagt tcaagaggtt cttcgccgga ccggtgacgg ttgtcgcttc
      601 aataatgctc agaattttca ttgcagattc gcagggtggg cagttgccgg aggaggttcg
      661 ggtggcgcgg caggcgccgg acaacatcca taatcgcaca aagcagcctc tccccggaat
      721 agaataaatc gccaattcac cttattttca ttaaatgagg cggaagatcg cagcggtttg
      781 gttaagcgcc ctcgcgatgg cggttctaat gcggcccgac acaatcgtca cgggccagaa
      841 ccaggtgcgg ccgcggcggg ttgaaaactc acgaccgcgc gagtccgcgt cccagattga
      901 cccatcggaa attcgcagcg agctggtcac ttatccgagt gcgcaagtcg ccttcatctg
      961 cggtccgcag ttgaaatcaa acagtcctgc aaatccgttt ccgtggttcg acagcacgca
     1021 ggttgcgcag gggcatgtgc aagggcgcga ggcacccagg atcgcgccgc gcgtgttgac
     1081 gggcgttgtt agtgtcgctc ccaattctcg catggtgacg ggagtgggca cgcgcttcag
     1141 agccgaggtt gatccgcgcg gacccgcgcc gtactacgac ggttggtttc gaattcagca
     1201 aggcaatacc tggcgcgaag tgaagatcgc ttcagtcgaa tccgacacgc aacttacgct
     1261 cgtttcgccg tggcgattcg caaacgccaa tcagctaaaa gcggacacct attatcgcaa
     1321 cgttaatcaa gctgtgtgga actatgatca ctacgcgcgc gcgacttatt acgacacagc
     1381 gctggttcag tacatcaatt actaccgcac ccgtgatgcc gcgttcttga actacgcgcg
     1441 caggatcgcg gattcgcact gggggtcggc atacattgat tttggaacgg tgacggaagg
     1501 cccaaatcat ttgccgcccc gctcgcaggc attcgccgga ctgatgctcc gagcgctcga
     1561 cgacaagcct gaatattggg attaccttta tcgtgaagtg cgcgcgactt tcgatcactg
     1621 gctgaagcga aatcgcaaca acgcaacgct ttactacgac attcgcgaag atggctacgc
     1681 ccagttgtac gccgtgatgc tcgcgcgcgt gttgcccgat cgctatccgt tgcacgcgaa
     1741 tggaactttg aagcccgcca ccggcgtggc aaccgacggc gcgcgcaaac gcgcggcgct
     1801 acttgccgat gcagaagata tcgccgtgaa cttcttcggg cgtttgcaga agtctgatgg
     1861 gtcatggcgt tgggatgccg acgttggacc ggccccgact gacaaacacc gcaacatcga
     1921 acagccattc atgatcggcc tgtacctgga aagcgcgatc cttctgcatc aactgagtgc
     1981 gaatcccaca gtcaaggcta atctacggga tcagatcgtg cgcgcttgtc gtcatcttta
     2041 tcgcgacacc taccgggcaa ccgaagtagt taaggacatg ccgcagtacc gttggcgcgg
     2101 cgtttggtac ttctggggtg gcggcaacct tgcgaatccg cgcgcgtacg aacgcggtga
     2161 cggcgatcgc gtcacgaacg gcgacgcaaa cgttattcgg ggcgtgcggc acttgaactc
     2221 aaccatccat catgcattcg ggtacgccca tattcttacc ggcgatcgag aatttctgag
     2281 gatgggcgac gagattttcg gcgcgtcgtt cggcgatgcg accgacacgc tccgaaatct
     2341 ggcgaccgtc ggcggcaaag aatacgacat gacgtttcgt tcgtccggca gatacctcgc
     2401 ctggcggctg tcccggccgt aatgcgtcgc ttcggcccga actgactgaa attgtcagtc
     2461 atttcagtga attttgatta gaagttgtta ggaagcgacg ccggattcat cctttctttt
     2521 ctttggcggg cccggacatg gccgcaagga acttgggttt cctttcaaac ttacggccct
     2581 tatttcctgg cccgcaccac agaaaaaagc ttcgttgatt gagattgccc ctcgaccagc
     2641 aaagcaccaa caaaccgcat gagtgtcgcc attcaagaaa aattctacaa acctgtcgca
     2701 atcgcagccg cgctggcgtt tgtctacttc gcggtgttga tgaagttaag ccgcgactgg
     2761 tggacggacg agaactattc gcacggcctt ctggttccgt tcatcatcgg tttcatcgtc
     2821 tggcaagagc gaaagcgatt caccgaacag caacgaacaa gcgcgctttg gaccggcatt
     2881 gtttgtgtcg gtttcgcttt gctcgcactt tgggccggaa ccgccggcgc tgagttgttt
     2941 gtgcagcgcg cgtcgcttct gctgatgctt gccggaatcg tgatctactt cttcggcttt
     3001 cgcatcatcc aggtggtcgc cgtgccgatg ttgctattgg cgctggcgat tccaatcccg
     3061 cagatcatct tcaacaagat cgcttttccg cttcagcttt tcgcgtctaa gtgcgcggtg
     3121 gcggccatgt cgttctttga gattcccgtg ctgcggcagg gcaacgtgat cgagttgatg
     3181 ccgctcggcg caaccgagcc gaagcgactc gccgttgtgg aagcgtgcag cggcatccgt
     3241 tcgctgatga cgctcgttac tctggcagtc gtttacgcgt atttcacgcg gccaagagac
     3301 tacgcaggcg gcccgcctga tgcaggccgg cggcctgcgt accgcacctt cgggttctgg
     3361 cgctcagtga ttcttattgt ttcggccgtt ccgatcgcca ttctgacgaa cgctgcgcga
     3421 gtcagtggca ccggtgtttt ggcgcattat tacggcacaa aagtggccga tggcttcttt
     3481 cattcgttct caggctgggt gatttatctg gtggcggcgg cgttgctgtt cgcgacggga
     3541 tgggcgctcg accggacgcc gcgactgttt ggtgggcctg gaaaaccaac cgcaaccggc
     3601 aaagtgactc gagcgaaagt tcagagcaag ggacccgcgc tcaacgaggc gcaaagctaa
     3661 tcatgtcgaa atcgaattcg aaaagattct ggattttgct ggtggtgctg ctgattggcg
     3721 gcggaatcat caacgtgtgg gagcgtgccg gcgaagcgaa aatttcacgc aagtcgctga
     3781 aagaatttcc ttcccagttc ggatcgtggc gacaaagcgg cgccgacact cggttcgatg
     3841 ccgagacgga aaaggtgctc cgtgcggacg aatatctttc gcgcaactat gaatccgatg
     3901 gccgcgtcgt gtcgttctat gccggctact atgcttcgca acgaaccggg gcaacgtatc
     3961 acagcccgct caattgcctg cccgggtctg gctgggtgat gagcgatggc gggcgaatca
     4021 tgattactgc gtcgggtggc cgtccgtcat tcgaagccaa tcgttacgtg attcagaacg
     4081 gcaacaatcg agcgttgatg gtgtattggt acgaagggcg cggccggccg cttgccagcg
     4141 agtactgggg caagatctac accgtgatcg acagcgtccg ccgacgtcgt tcggacggcg
     4201 caatggtgcg catcatggtg ccgatcgcca actcgaaaga agaagccgag aagaccgccg
     4261 ttgagcttgc ttcgcaagct gctcctgaac tgcctgcatt tattcccgac tgagtgtctc
     4321 tgacgccgcg gctcgaccgt gggcagatgg gacatatacg tctcataggt cgtatgggac
     4381 ctatatgtcc tattcagatc tctcgaaggc cgcagccggc gaactttttc ctgaaatcca
     4441 cttccgatta tccctttctt acctgtgact ccgccgctgc gcgcgagtga cgttttttga
     4501 cacccttcaa tcagtaactc aaacggcctt cgcgcgacat tgcccgttgc cgcaaagaca
     4561 accgttgagt gaattgccga acgcgtaacg caaattatta atttgcggac ccgcaatccc
     4621 cgacgcatcg ggattgcgct acagcgttca cggagaccgc aatgaaaaat cgagagtgcc
     4681 gccgcaagtt ctacgtcctt cctctgtttc ttttcctgct cgccgccgtc tttgttctcg
     4741 gcgcgtgcac cacgccggaa aaagccaaag ccaaccacgt cgcccgtggc caggcgcttc
     4801 tgaaagataa aaagtttcag gaagccgtgc tcgagttccg cagtgccctg caaatcgacg
     4861 acaagctcgc cgaagcgcat tggggactgg cgaacgcgta cgaaggtttg cagcgttacc
     4921 aggaagcctt cgaagagatg cgcgcgacgg cgtcactcga tccgaaccac ctcgatgtcc
     4981 gcgtcaagct cggtaactac tacctggtcg gcgcaaagca ctcatccgcg gcgctcggcg
     5041 aggctgaacg gctcgcgaaa gaagttctcg acaaagatcc taatcacatc gaaggtcaca
     5101 tcctgatggg tggcgtcctt ttcgcccagg acaagaagca ggaagcattc gcagagttga
     5161 atcgcgcgat cgagttgaat ccgcagcggg tcgaatcgta cctgagtctg gctcgctttc
     5221 acgtgttgac gaacgacatt gcgactgcgg aaacgattta tcagcgcgcg atttccgtca
     5281 gtggcggatc ggcgatggcg cattacgaat acggcaagtt cctggtcggc gcacagcgca
     5341 tcgatgaagc cgaggccgcc tttcaaaagg cgattcaggt cgaaccgagc aatcgcgacg
     5401 cgcgcttcat cattgccagc ttctacctgg tgaacaagcg gctcgacaaa gctgaagagg
     5461 cctacaaagc actggccgaa atcgacaaag acaaacctga gggccgttcg gtgctcggag
     5521 acttctactc gtcagtcggt cgtctggacg aagcgattgc gatctacaga gaagtgctga
     5581 cgaaatcgcc ggactacacg caggcgcact accgtttggc cgagatcatg ttgaaccgcc
     5641 gcgatatcgc cggcgccaag aacgaagtcg aatcggtcct gaagaatgac gcgacggatc
     5701 gccaggcgtt gattctgcgc gcgcgcatcc agatgcaggc gggccagccg aacgatctga
     5761 aagtcgcgat cgaagacctg cgagaagtgc tgaggcagga gcccaactcg cgggccggat
     5821 tgttcttcat ggcggaagcc aacttccgtc tgggtcagat ggatcaggcg cgggtgtttg
     5881 ccggcgacct cgaacgaaac tatcccgagt acctgccggc caagctgatg caggtgcaaa
     5941 tcaatctcgc gagcggcgat gccaagtcag cgctgaaact cgcggcgcaa ttacaagagc
     6001 gtctggcgaa agccgcaccc gatcgcgata cgtcgccgca gatgctggcc gagttaagag
     6061 tcaaagcgct gatcgcgcat ggctcggccg cgttacagct gcgagatatc aaaaccgctc
     6121 gtcaggattt cactgccgca cgcgatgccg cgccgcacaa ccccgacagt catgtgaacc
     6181 tcgcggccgt tgccctggcc gagggcaagg ttgacgaagc catcggtttc tataacagcg
     6241 cgctgtcgct ggatagcgcg cacttcagct cgctgcgtgg gctgatgaac atttacacgg
     6301 cgcagagaaa acccgaccag gcacacgcgc ggatcgatca agccatcgcg tcgcaaccca
     6361 acaacgcttc gcttcacttc ctgaagggtc gcgtctacgg ctacgaaatg aacgcgcagg
     6421 gcgcagaagc ctcgttccgc cgcgccctgg agatcgacgg caactatctc gcggcctact
     6481 cggccctcgg cgcactgttc gtgaatacga accagcagca acgcgccatc gaagagtatc
     6541 gaaagattgt cgagcgtcgt cctgacagcg cggcgatttt cacgctgatc ggcatgctcg
     6601 aaatgaacct gcagaacatc gacgccgcga tcgacaacta ccgcaaggct ctggcgatcg
     6661 atcagaacgc ggtcttcgcc gcgaacaatt tggcgtggct ctacgcacag catggcaaag
     6721 gcaatctgga cgaagcggtg cggctggcgc aaacagctgt gcaggcgaat ccggaagtgc
     6781 cgagcttcgt cgatacgttg ggctgggttt actacaagaa aggcctgtac gccgccgcag
     6841 ccgaacaact gaagaaggcc gcgaccgtcg atgaaaacgc cgcgcgccgg aacaacctct
     6901 cgccttcccc gacttatcgt tatcacctcg gagtcgcgtt ggcggcaaaa ggtgacaaag
     6961 ccggcgcccg tcgcgaaatc gaaaccgcgt tgcgcctggc tgagaagtcg cctttccccg
     7021 aagccgacga agctaagaag gccctgggaa ctctgtaatc gcatgtgtcc gattcgtcgc
     7081 atgtgaccta tcaaggagcg gaacaatgag cactgaattt cgaccgcgca aactaggcga
     7141 gtacgcccgc atcgcactga agcggaagtg gatgatcatc ctgccgacgc tcgcgattgg
     7201 cctggccatc ggctatgtcg tgtttcgtct gccggacctc tacgaatcga ccacgctgat
     7261 cgtggtgaag tcttcgacgc tgccgaattc ggtcgtgccg atgattacgg aagaaacgct
     7321 gacacgcgaa ctcgccagca tttctcaagt cgtcaccagc cgcagttcgc tgcaaccact
     7381 ggttgaaaag tacgacctgt acaaagaaga gcgggcgcgg ggcgaagcga tggaagtaat
     7441 catcgacgac atgcgcaagg ggattaacgt caaggtcaac accagccgca acgacatcac
     7501 gaacgcgttc aacatcactt accgcgggcg cgatccgaaa acgacccagg ccgtcgccgg
     7561 cgaactcgcg agcaaataca tcgacgagca aactaaaggc acggtcaacg cgggcgcgtc
     7621 ggccaagcag ttcatcgaag aacaagtgcg cgccgcgaaa gaagaggtcg acacgatcga
     7681 cacgcagcgg ctcgcctacc tgcaacagaa cataaacaac ctgccgtcgc agtcgcaggc
     7741 gctggttggc cggctgacgg gtttgcatga agagcagaag gcgctgattg cggaacaggg
     7801 ccgcctgcgc gatttagcgg ccgcgtatcg cagtcagctc ggcgacatta ccaagagcca
     7861 cgaacaggag atcgtcctgg cctcggaagg ggcgaccgat ccgaagacaa ccgccgcctg
     7921 ggcacaattg gttagccggc gctcggatta cgaaggcgaa ttgcaagttc tgataacgca
     7981 gtacaaagaa aagcatcccg acgttgtcac taagaagaag cagatcgaag acatcaagtc
     8041 gcagcaggat cagatgatga acgagtggaa ggatcggatc gaagagcgca gacagaaact
     8101 gacgaagctc accgatccgc gcctgctgac tttgcgcacg aacatttcaa tggtcgaggg
     8161 cgacatggat cggcagaacc gactgttggc tgaaactaac cggcaaatcg gcgaactcaa
     8221 cgcgcgcatt aatgcgattc cgactgccga agttgctttg caagccatcg accgggaata
     8281 cgaaaccaag aagacgaact acgacaacct gctcctgcaa cagtcgaaga tcgtggttgg
     8341 cgccgacgcg gcgaaagagc agcaaggcgg cggcattcaa gtggttgacc cggcaaacct
     8401 gcccgagaaa cctgtcgcgc cgaagcgatt cgtgctgacg gcgggcggtt tcggaattgg
     8461 cctggcgctg gggatgctgc tggtcctgat tttcgaagtg cgccgcttgt tcacgattca
     8521 aacgattgaa gacgcgaagc attacaccag tctgccggtg ctcgcttcga ttcctgaact
     8581 gctgacgccg gccgaagcgg tcgccattcc gcgccgcaga agtctcgccc tggccgccgg
     8641 catcgccgcc gcagtcgtcg cggtgccgat gcttgctttt gttctaaccc tgacgcacgt
     8701 gttcgaaaag attacccagt agcctgggag cgcacgcttc cagcgtgcaa tacagtgcgg
     8761 gcaggatgcc cgcgctccca gacccacgga gaagccatgt acatagaatt ttacggactg
     8821 aaagagttgc cattcgcgct cacccccgat ccgcgctacc tctacttcac gccttcgcac
     8881 acggaagtga tggcgaacct gcactacggc atcgagagcg gccgcggcct tatcgtcgtg
     8941 accggcgaag tcggcaccgg caagacgact ttgctgcgct ggatgatgca gcgcctggat
     9001 cgcacggtga tggtggccta catcttcaac ccgcgtctgt ccgtcgcaga gttctatcaa
     9061 tatctcgcga cgctcttcaa catcggcgag tgggaaaaca aatcggacct gctgatcgaa
     9121 ctcggcaaag ttctcgagtc gcgtcacaac cgcggcctgc gcacggtgct ggtcgttgat
     9181 gaaggacacg gcttgtccac ggaagttctg gaagagattc gcctgctgtg caact
//
LOCUS       DATDBY010000439         2444 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1443106, whole genome shotgun sequence.
ACCESSION   DATDBY010000439 DATDBY010000000
VERSION     DATDBY010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1443106"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..843)
                     /locus_tag="VIT19_08245"
     CDS             complement(<1..843)
                     /locus_tag="VIT19_08245"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEY5839010.1"
                     /translation="MPTTQKKPNPISKLSAIPPGIARLVTAVVLLPILIASILVPSFA
                     PLFVVLVGVALLLALLEFWIIAGKQQIRADPVAGFLGAAALFTIFYFAHPREAVDFSA
                     VVAVLILLTICSLVAAMLRGAPFERMLARSGATVLGVMYVVLLGSHLVAVRNGFSAEL
                     SKDLLSFFFLVLMGSDAAAYYGGRAFGRHKLAPNVSPGKTWEGAVAGMLASLLLAAAA
                     HYWFFRQLPLKFALPLAAAMNVFGVLGDLTESALKRSAGTKDTAKILPGHGGMLDRVD
                     SLLFN"
     gene            complement(913..1704)
                     /locus_tag="VIT19_08250"
     CDS             complement(913..1704)
                     /locus_tag="VIT19_08250"
                     /inference="COORDINATES: protein motif:HMM:NF011405.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEY5839011.1"
                     /translation="MHENFTEVVEKGSRDERLLASIAWDRLPRHIAIIMDGNGRWAAQ
                     RGQPRITGHRAGVEAVRAAVDTGARLGLGALTLYAFSTENWKRPRYEVEALMRMLRKY
                     LRLELEEINRQNIRFQTIGRTHELASNVQQEIVRAGERTAKNSGMVLSVALNYGGRAE
                     IVDAARAAMRRVIAEKRAPDELSEEDIARELYTRDLPELDLLVRTSGELRISNFLLWQ
                     SAYAEIHVTETLWPDFRRVHLLEAIVDYQQRRRRFGGLKLVANAK"
     gene            complement(1764..>2444)
                     /locus_tag="VIT19_08255"
     CDS             complement(1764..>2444)
                     /locus_tag="VIT19_08255"
                     /inference="COORDINATES: protein motif:HMM:NF013575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine synthase A"
                     /protein_id="HEY5839012.1"
                     /translation="TVQGELTRVLSLLDGREVVVHGSGRTDAGVHAEGQVASVQLNRE
                     IAPDKLRSAINGNLPPDVRVLFVGAAAEDFHARYSARGKTYTYRIVHGPVMSPFWSRY
                     ALLESRALNLELASRCARSFVGEHDWTAFSAAQSEAESRVRHVTRCELDHRWSARGRC
                     HLIEVSVTANGFLRYMVRSIVGTLLAAARGDIDEGTVLRALREGKRELAGATAPAHGL
                     TLISVQYD"
BASE COUNT          518 a          780 c          689 g          457 t
ORIGIN      
        1 attgaacagc aagctatcga cccgatccag catgccgcca tggcccggca gaatctttgc
       61 cgtgtccttt gtgccggcgc tgcgttttag cgcactctca gttaaatcgc cgagcacacc
      121 gaaaacattc atcgctgctg cgagcggcaa agcaaacttc aaaggcaact gccggaagaa
      181 ccagtaatgc gccgcagcgg ccagcagcag actcgcgagc atgccggcaa ccgcaccctc
      241 ccaggttttg cccgggctta cattcggcgc cagcttgtgc cttccgaaag cccggccgcc
      301 gtaatacgcg gccgcgtccg agcccatcag gacaaggaag aaaaaggaaa ggaggtcctt
      361 tgataactct gcgctgaagc cgttgcgcac ggcgaccagg tggctgccta aaagcaccac
      421 gtacatcacg ccgagcaccg tcgctccgct acgcgccagc atgcgttcga agggtgcgcc
      481 gcgcaacatc gccgccacca aagaacaaat cgtcagcagg atgaggaccg cgacgactgc
      541 tgaaaagtcc accgcctcgc gtggatgggc gaaataaaaa atcgtgaaca aggctgcggc
      601 gccaagaaac ccggcgaccg gatcggcgcg aatttgctgc ttaccggcaa taatccagaa
      661 ctcgagcagt gccaaaagca gtgcaacgcc gacgagcacg acgaacagcg gtgcgaaact
      721 tggcaccaaa atcgacgcaa tcaggatcgg cagaagcacc acggccgtta ctagccgcgc
      781 gatgcccgga ggaatggcgc tcagcttcga gatgggattc ggtttttttt gtgtagtggg
      841 caagttggtt gacgggtaac cgccttcgat gagtatctaa cctgctcgcg gtggcttgcg
      901 gtctttagac gctcacttcg cgttcgctac gagcttaagt cctccgaatc gccgccggcg
      961 ttgttgataa tcgacaatcg cttcgagcag atgaacgcgg cggaagtcgg gccagagcgt
     1021 ttccgtcaca tgaatttccg cgtacgcgct ttgccacaag agaaagttcg aaatgcgcaa
     1081 ctcaccgctg gtccgcacca gcagatcgag ttcaggtaaa tcgcgggtgt acagctcgcg
     1141 cgcgatgtct tcttccgaca attcatccgg cgctcgcttt tcagcgatta ctctccgcat
     1201 cgcggcgcgg gcagcatcga cgatttccgc gcggccgccg tagttcagcg cgacgctgag
     1261 caccatccca ctgttcttcg ccgtacgctc tccggcgcgc acaatttcct gctgcacgtt
     1321 cgacgcaagc tcatgggtgc ggccaatggt ctgaaaccga atgttctgtc gattaatttc
     1381 ttccagctcc agccgcaggt acttgcgcag cattcgcatc agcgcctcga cttcgtaacg
     1441 cgggcgcttc cagttctcgg tcgaaaacgc gtagagcgtg agcgctccca acccgaggcg
     1501 agcgccagta tcgactgcgg cgcgcacggc ttcgacgcct gcgcggtgtc cggtgatgcg
     1561 cggctgtcca cgctgcgcgg cccagcgtcc gttaccatcc ataatgatcg cgatgtgccg
     1621 cggcaggcga tcccacgcga tcgacgcaag cagccgctcg tcgcgactgc ctttctcaac
     1681 cacttctgtg aagttttcgt gcactgatgg aaccccgaca cgtcggggaa gaggctcaat
     1741 tcttaccgca agcgaaaaga ctgtcaatcg tactgcacgc tgatcagtgt caggccgtgt
     1801 gcgggagccg tggcgccggc caactcgcgt ttgccttcgc gaagagcgcg caagactgtt
     1861 ccctcgtcaa tgtcgccacg cgctgcggcc aacagtgttc ccacaattga tcgcaccatg
     1921 tagcgcagaa aaccattcgc ggtaacgctg acttcgatca ggtggcaacg gccgcgcgca
     1981 ctccatcgat ggtcaagctc gcagcgcgtt acatggcgga ctcgcgattc ggcctctgat
     2041 tgcgccgccg agaaagccgt ccagtcgtgc tcgcccacaa acgacctcgc gcatctgctc
     2101 gctagctcaa gattcagcgc ccgagactca agcagcgcgt agcgcgacca gaatggcgac
     2161 atcaccggcc cgtgcacaat gcgatatgtg taggtcttac cgcgcgccga gtaacgcgcg
     2221 tgaaagtctt cggcagcggc gcccacaaac agcacccgca catccggcgg cagatttccg
     2281 ttaatcgcgc tgcgtaattt gtccggagct atctcgcggt ttagttgcac gctggcgact
     2341 tgtccttcag cgtgcacgcc ggcgtcggtc cgccctgaac cgtggacgac aacttcgcga
     2401 ccgtcaagca acgagagaac ccgcgtcagt tccccctgca cagt
//
LOCUS       DATDBY010000440         2519 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2694546, whole genome shotgun sequence.
ACCESSION   DATDBY010000440 DATDBY010000000
VERSION     DATDBY010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2694546"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..989)
                     /locus_tag="VIT19_08260"
     CDS             complement(<1..989)
                     /locus_tag="VIT19_08260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839013.1"
                     /translation="MKRKPHVAALLVLAVLRCGVSLAQEKQQPEANTRPVCTAEDAFT
                     IIEQQIDATRTFDDDARRVGVLIRAADLLWPYREPNARKAYAEAFTFAKRHFKEKGDR
                     PDQEGKLSVGKPDLRYTVIGSIARHDTKWAKKLSAELLKEQEDEAASKSTKDAQQAER
                     TAERLLTVATSLLPSDETASLSFARSSLKYPATMYLAQFLYALSSRSKSTADPFYQEA
                     LAAYSNAAMERLLYLSAYPFGNNRDAGDMPGYMLYQVPANFTPNTSLQRAFVQTILQR
                     VQRFISNPTDVTPGTRVSDPEEMWLALARLEKQIQQSLPDLAPAVEVARNNVAA"
     gene            complement(996..2021)
                     /locus_tag="VIT19_08265"
     CDS             complement(996..2021)
                     /locus_tag="VIT19_08265"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEY5839014.1"
                     /translation="MPDLLDLLIIGAGPAGLSAADAAAREGLSYLVIERGTIANTIRQ
                     YPVGRAMFSTPNELEMREGSLQPIHEKPTREELLSHYIHFVLDNDLRINTGEEVVDAE
                     RANSESFVVRTRCRSLQPGQQDNTYHARTILFAIGAMEHPRRLNVPGEDLPKVHHRFV
                     EPYPYVRREVLVVGGGNSAAEAALFLSEEGARTTMAIWREDWENRDPKAGAMKHWVRS
                     PLEREITEGRLRVVLYKQIDEITQDSVRLTTDTGESTSIPNDVVFVLVGSDADLTLLK
                     KLGVKTAPGKLTEVPVYDPETFETDVRGIYVAGHFTHERHIKAAIDIPRKIIPLIAEQ
                     LRGAGVS"
     gene            complement(2174..>2519)
                     /locus_tag="VIT19_08270"
     CDS             complement(2174..>2519)
                     /locus_tag="VIT19_08270"
                     /inference="COORDINATES: protein motif:HMM:NF014609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HEY5839015.1"
                     /translation="YDFASSGATGCYAFARETLEVGEARAHARFFVGQNIGEDPATGS
                     AAGPLGGYLVHHDATGVEPVDGVYKFVIEQGDFIKRPSRIGLEVKGAPGKVDEVRVGG
                     PSVVVAKGVVEF"
BASE COUNT          492 a          741 c          710 g          576 t
ORIGIN      
        1 gccgcgacat tgtttcgggc aacctcgacc gcgggcgcca ggtcaggcag cgactgctga
       61 atctgttttt ccaaacgagc gagcgccagc cacatttctt ccggatccga gacccgggtg
      121 cccggtgtta cgtcagtggg attactaatg aacctctgca cgcgttgcag aattgtctgg
      181 acaaacgccc tttgcaaact tgtattcgga gtgaagttcg ccggcacctg atacaacatg
      241 tatcccggca tgtctcccgc atcgcggttg ttgccgaacg gataagccga aaggtagagc
      301 agccgttcca tcgccgcgtt tgaatacgcg gccagcgctt cctgataaaa cggatcggcg
      361 gtcgacttgc tgcgcgaaga caaagcgtaa agaaactgcg ccagatacat cgtcgccgga
      421 tacttcaggc tggaacgcgc aaaactcaac gatgctgttt catctgacgg caacaatgaa
      481 gttgcgacgg tcaaaagtcg ttcggcagtg cgctcggcct gctgggcgtc ttttgttgac
      541 ttgctcgcgg cctcgtcttc ctgttccttc agaagttccg ctgacaactt ctttgcccat
      601 ttcgtgtcat gccgcgcgat tgaaccgatg accgtgtatc gcagatcagg cttgccgact
      661 gatagctttc cttcctggtc gggacggtcg cccttttcct tgaaatgacg tttagcgaag
      721 gtgaatgcct cagcgtaagc ttttcgcgca tttggttctc ggtaaggcca aagtaaatcc
      781 gccgcgcgaa tcaaaactcc gacgcggcgt gcgtcatcat cgaaagtcct ggttgcgtcg
      841 atttgctgct cgatgattgt gaacgcatct tctgcggtgc acacaggtcg cgtgttcgct
      901 tccggctgtt gtttttcttg cgcgagtgaa acgccgcacc tcaagactgc aagaaccaag
      961 agagcggcga cgtggggttt tcttttcatt gtgccttagc tcacgccagc gccgcgtagt
     1021 tgttccgcaa taagcggaat gatttttcgt gggatgtcga tggcggcttt gatatggcgc
     1081 tcgtgcgtga aatggccggc gacgtaaatg ccacgcacgt ctgtttcgaa cgtttccgga
     1141 tcataaaccg gaacttcagt gagttttccc ggcgcagtct tcaccccgag tttcttgagt
     1201 agcgtgagat cggcgtcgct tcccaccagc acgaatacta cgtcgttcgg gatcgacgtc
     1261 gattcacctg tatcggtggt gagtctcact gagtcctgag tgatttcgtc aatctgtttg
     1321 taaagaacga cccgcaaacg gccttcggta atctcgcgtt ccagcggcga gcgcacccaa
     1381 tgcttcattg cgccggcctt cggatcgcgg ttctcccaat cttcgcgcca aatcgccatc
     1441 gtcgtccgcg cgccttcttc cgataagaac aaggcggctt cggccgcgct gttgccgcca
     1501 ccgacaacca atacttcgcg gcgcacgtag ggatagggct cgacgaaacg atgatggacc
     1561 tttggcaggt cttcgcccgg gacattcagc cgccgcggat gctccatggc cccgatggcg
     1621 aacagaatcg tgcgcgcgtg ataagtgttg tcctgctgac ctggctggag actgcggcaa
     1681 cgcgtacgga cgacgaaaga ttccgagtta gcgcgctcag catccacgac ctcttcacct
     1741 gtgttgatgc gcagatcgtt gtcgagcacg aaatggatgt agtgcgagag caactcctcg
     1801 cgcgtcggct tctcgtgaat tggttgcagc gagccttccc gcatctcaag ttcgttcggc
     1861 gtcgaaaaca ttgcgcggcc gaccgggtac tgccggatgg tgttcgcgat cgttcccctc
     1921 tcgatgacga gatacgacag accttcccgc gccgctgcgt ccgcggcaga caagccggcc
     1981 gggccggcgc cgatgattag gagatcgagg aggtcgggca tttgctgacg ctccgtagga
     2041 gcggaatgtt tatagttcgt taggctggtt tttaccacca acgcaatcga gcggcgagac
     2101 gccgctcgat tgcggaagga tattttgggg tcttagttct ataaacattc agctcccctg
     2161 gagctgacga cgactagaac tccacgacgc ccttggccac caccaccgac gggccgccga
     2221 cgcgcacttc atctactttt ccgggcgcgc ctttcacttc caggccaata cggcttggac
     2281 gcttaatgaa gtcgccttgt tcgatcacga acttgtagac gccatcaacc ggttcgacgc
     2341 ccgtcgcatc gtgatgcacc agataaccgc ccaacggccc cgccgcgctg ccagtcgccg
     2401 gatcctcacc gatgttctgg ccgacgaaga agcgtgcgtg cgcccgagct tcgcccacct
     2461 cgagtgtttc gcgcgcaaac gcgtagcagc cggtcgcgcc tgagctggca aagtcgtag
//
LOCUS       DATDBY010000441         3047 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1486085, whole genome shotgun sequence.
ACCESSION   DATDBY010000441 DATDBY010000000
VERSION     DATDBY010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3047
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1486085"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VIT19_08275"
     CDS             <1..195
                     /locus_tag="VIT19_08275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839016.1"
                     /translation="GSSASQLGNSNISEGSWKDGKLAVILEGGTGKIALAATMIDGKL
                     SGDFDYAGQLQGKWVAIRKK"
     gene            192..1292
                     /gene="pheS"
                     /locus_tag="VIT19_08280"
     CDS             192..1292
                     /gene="pheS"
                     /locus_tag="VIT19_08280"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002639667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEY5839017.1"
                     /translation="MSESANAPAKEVEAAREAFEREFERFARFIGSAASPMRLTLSEA
                     EGEQRALSELRTRHLGKKSPIASAKKLIGRVSPEERAGFGQLVQKTEAAFTQSLDDVE
                     AALKAIIEAARTARDAIDVTIPGRRPRQGHLHPVTLMRQRIEDIFVSLGYAVEDDREI
                     ETDFFNFEALNIPEGHPARDPQDTFYSTEGFALRSQTSTVQIHAMQRRGAPVRMIAPG
                     RVFRRDTPDPTHNPMFYQVEGLCVDRGITMAHLKGTLAEFAHRLFGPDTKTRFRPSYF
                     PFTEPSAEVDYSCFNCGGDGCRICKGSGWIELGGSGMVHPNVLRAANIDPEKFTGFAF
                     GLGIDRTCARIYQLDDIRLLFENDVRFLEQFR"
     gene            1363..>3047
                     /gene="pheT"
                     /locus_tag="VIT19_08285"
     CDS             1363..>3047
                     /gene="pheT"
                     /locus_tag="VIT19_08285"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEY5839018.1"
                     /translation="MFISYNWLHELTGTKLNPEEIRERLTNVGLAVDAVEQRGEDFVL
                     DVEVPSNRGDCLSHVGIARELAVIEKSQVQSPKSKVPEANGKTADLTSVTIDDPDLCP
                     RYAARIVRGAKIGPSPGWLVKKLETIGQRPINNVADITNYVLHELGQPLHAFDLAKLD
                     EQRIVVRRARRGEKIKTLDGVERALDEQMLVIADASRPVAVAGVMGGEESEISNATTD
                     ILIESAYFNPQSVRRTAKLLGLNTEASHRFERDTDPEGVIRAQERCVALICEIAGGTA
                     TEDAFDAYPNPVQRKEVILRPPRVEAITSLKVETEEVQRILAALGFEQRAQDGAALRF
                     TVPSWRHDVSIEEDLVEEVARHAGYAQIQEALPPANSAGEYHSTESCKRALRTALAAR
                     SYDEAISFSFVEQTNDFELIPTFATSEAVVLTNPIIEEASRMRQTLLPGLLKSVQHNI
                     NHGTRNVGLLELGRIFASIQKEELPEEREALALVATGGLMFAGRAQPERDLDFYDIKG
                     ALESAVEAMNLPPLEFEASEIKHLRPGQSAAISVSGHRVGSIGRLSEAAAGPY"
BASE COUNT          712 a          842 c          908 g          585 t
ORIGIN      
        1 ggcagcagcg cctcgcaact cggtaactcg aatatttcag aaggcagttg gaaggacggc
       61 aaacttgcag tgatattgga aggcggcacc ggcaaaatcg cgttggcggc cacaatgatc
      121 gacggcaagt tgtccgggga cttcgattac gccggccagc ttcagggcaa gtgggtggca
      181 atcagaaaga aatgagcgaa agcgcaaacg cgcctgcgaa agaagtcgaa gcagcccgcg
      241 aagcgttcga acgagagttc gagcgctttg cccgctttat cggcagtgct gcgtctccaa
      301 tgcgcctgac gttgtccgaa gccgaaggtg agcagcgcgc tttgagcgag ttgcgcacgc
      361 gacatctcgg caagaagagt ccgattgcgt cggcaaaaaa actcatcggg cgagtttcgc
      421 ccgaagaacg cgcggggttt gggcagctgg ttcagaaaac cgaggccgca ttcacgcaat
      481 cgctcgatga tgtggaagcg gcgctgaaag cgatcattga ggcagcgcgc accgcacgcg
      541 acgcgatcga cgtaaccatt cccggacgcc gtccgcggca agggcacctg catccagtca
      601 ccttgatgcg tcagcggatc gaagacatct ttgtttcgct cgggtatgcc gtcgaagacg
      661 atcgagagat agagactgac ttcttcaact ttgaagcgtt gaacattccc gaaggtcatc
      721 cggcgcgcga tccgcaggac actttctact cgactgaagg gttcgcgctg cgctcgcaaa
      781 catcgaccgt gcaaatacac gcgatgcaac ggcggggcgc gccggtgcgg atgatcgcac
      841 cgggccgcgt ttttcgccgc gacacacccg acccaacgca caatccgatg ttctatcaag
      901 ttgaaggctt atgcgtcgat cgcggcatca ccatggccca tttgaaaggc acgctggccg
      961 agttcgccca tcgactgttc ggccccgaca caaaaacgcg ttttcgacca tcgtactttc
     1021 cattcaccga gccgagcgcc gaggttgatt acagttgctt caattgcggc ggcgacgggt
     1081 gtcgtatctg caaagggtca ggctggattg agctgggtgg gtccggcatg gtgcacccga
     1141 acgttctacg agcggcgaat atcgacccgg agaaattcac cggctttgca ttcggtctcg
     1201 gcatcgaccg aacgtgcgcg cggatatacc agctcgatga cattcgtttg ctgttcgaga
     1261 atgacgtgcg cttcctggaa cagtttcgat aggtcgcatt ggtcccaata gtcccttggg
     1321 tcgcatagga caagatagga caaataggac ctattaaaga acatgtttat tagttacaac
     1381 tggctccatg agctgaccgg gacgaagctt aaccctgaag aaattcggga gcggctgacg
     1441 aatgttggtc tggccgtgga tgcggttgag caacgcggcg aagactttgt cctggacgta
     1501 gaagtaccgt cgaatcgcgg cgattgcctg tcgcacgtgg gtatcgcgcg cgagttggca
     1561 gttatcgaaa agtctcaagt ccaaagtcca aagtccaaag tcccagaagc caacggcaag
     1621 accgccgatt taacctccgt cactattgac gacccggatc tctgtccgcg ctatgccgcg
     1681 cgaatcgttc gtggcgcgaa aatcggaccg tcgcccggct ggctggtcaa aaaactcgaa
     1741 acgatcggac agcgaccgat aaacaacgta gcggacatta cgaattacgt gctgcacgaa
     1801 ctaggccagc cgctgcatgc gttcgatctc gcgaagttgg atgagcagcg aatcgttgtt
     1861 cggcgtgcgc gtcgtggcga aaagatcaaa acactggacg gcgtcgagcg agcacttgac
     1921 gagcagatgc tggttatcgc cgacgcatca agacccgtcg ccgtcgccgg cgtcatgggc
     1981 ggcgaagaat cggaaatctc aaacgcgacg acggacatcc tgattgagag cgcttacttc
     2041 aatcctcaat ctgtccgccg gacggcgaaa ctactgggct taaataccga agcatcacac
     2101 cggtttgagc gcgacacgga tcccgaaggc gtcattcgag cgcaggagcg ctgcgtcgcg
     2161 ctgatttgcg aaatcgccgg tggcaccgcg accgaagacg cgttcgacgc ttatccgaac
     2221 ccggtccagc gcaaagaagt aatcttgcgg ccgccacggg tcgaagccat caccagcctg
     2281 aaagttgaaa ccgaagaggt gcagcgcatc cttgccgccc tcggtttcga gcagcgcgcg
     2341 caggatggcg cagctctgag attcacagtg ccttcatggc ggcacgatgt ttcgatcgaa
     2401 gaagacctcg tcgaagaagt tgcgcgacat gccggctacg cacagattca ggaagctctt
     2461 ccgccggcga atagcgcggg cgaatatcat tcgactgagt catgtaagcg cgcattgcgc
     2521 acagcgctgg cggcgcgcag ctatgacgaa gccatcagtt tcagctttgt tgagcaaaca
     2581 aacgacttcg agctcattcc aacattcgcc acatcggaag ccgtcgtgct gacgaatccg
     2641 attattgaag aggcgtcgcg gatgcggcag accctgctgc cgggtctgct aaagtcggtt
     2701 cagcacaata tcaaccacgg cacgcgcaat gtgggtctgt tggaactagg tcgcatattc
     2761 gcatcgattc aaaaagaaga actgccggaa gagcgcgaag cgttggcgct ggtcgcgact
     2821 ggtgggttga tgtttgccgg gcgtgcccag cctgagcgcg acttggattt ttatgacatc
     2881 aaaggcgcgc tcgaatcagc ggtagaagca atgaatcttc cgccgctcga gttcgaggcg
     2941 tcggaaatca aacatcttcg gcccggacag tcagctgcaa taagcgttag cggccaccgc
     3001 gtcggatcaa tcggacgact ctcggaagcg gcggcggggc cgtacaa
//
LOCUS       DATDBY010000442         5279 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1352271, whole genome shotgun sequence.
ACCESSION   DATDBY010000442 DATDBY010000000
VERSION     DATDBY010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5279
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1352271"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..602)
                     /locus_tag="VIT19_08290"
     CDS             complement(<1..602)
                     /locus_tag="VIT19_08290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839019.1"
                     /translation="MFSDQFRRGESDKGKMPGVTGSKVVSALSDVAWKAFQSVNRLLP
                     EGEAIRPKWAPGPLLKSYERSAPPLGFPRETDSLCPRCVKEVRTAVISGETKLETLMH
                     QHPGELKAQILEENGQVIMRKTCPKHGEFTDVMATDPAFLERIESLFFGRDFRAAEDA
                     NVHKHGTSNIKFGRGAVLTVDLTNRCNMMCDPCFMDANQVG"
     gene            887..1789
                     /locus_tag="VIT19_08295"
     CDS             887..1789
                     /locus_tag="VIT19_08295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839020.1"
                     /translation="MDTILRRTFRFIVFALLVFLSAGATTEIPARVAHEDVETFASCE
                     VTNATFITWFPKEFECPVCKTKNTFMVVGSYGSYIYADPSKYQLIFWPYTDTPSWYSC
                     KKCRLSIFMEDFEQIPPDKIADLRKMLETTSLPAQTERPPKSGRLMSDPPYLEIPTAL
                     RVSVAEKVYQVLGKTGDEFWNHFYRVLAYHYDRQGKTAEAEQARRKSIAITEKLLTPK
                     SPGTRKELLYILGAMRHFVGEDTAALKALEEAGTLTYKNDELPAERNTNYDEYLSKAI
                     KEYVEMLKKGEGPRGNKSLRSTSH"
     gene            complement(1851..3122)
                     /locus_tag="VIT19_08300"
     CDS             complement(1851..3122)
                     /locus_tag="VIT19_08300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839021.1"
                     /translation="MKWHGRPARERTRKMRVPTANQQVRLGDLFANLSGLLQQHRSIA
                     RELMSHKLRLMSLSLALLTASHLAAVSLFAKSSQPPTARARASSFRIDESGTPSGGKL
                     YITVAGRERKIYNEAIEAWLINDGRDVIFSSHDGAGGFENEGQSLRIYNVATRSIRKI
                     LSETVGIVAVQEVKTSTGATALLVAMGDGGLGGSYFAVVDPKRGEVFFRRWAEVTAIN
                     GDNITLANYRADDFEAINDERGWKPGPSNQVISKTKVTPYKTETHDLKRLLRNRVIYN
                     RRPNLSAPSKPPKARTTRIYLWDANSDKPDIQLVAVTRRSIGDNVLELAMGWLFGTTL
                     SKEEEDRGLTLPTFGMRLQGVTLKNGVALIRFYQPEGATNYGSQGPFIFAKAIERTAR
                     QFPTVKKVEICAVGETLIDAQLERPFPRCAK"
     gene            3182..4234
                     /gene="lpxD"
                     /locus_tag="VIT19_08305"
     CDS             3182..4234
                     /gene="lpxD"
                     /locus_tag="VIT19_08305"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: protein motif:HMM:NF002060.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEY5839022.1"
                     /translation="MAANEKRVSELSAHVGGTVVGDSEVVIRRVNSLEAASEGDIAYV
                     EDEKFFAGAARSNASCVIVPESAALELPCQIKVKKPKLAFALIAEILHPAKRRESDVH
                     SSAAIADTADVALTAFIGPHVTIGDRSSVGVGTQILSGASIGDNVSVGSACVIHPNVV
                     IYDDVTIGDRVILHAGAVIGADGFGYVRDEHSHHKFPQIGTVVIEDDVELGANTCVDR
                     AALGRTRIGKGTKLDNMVHVGHNCDIGERVVIAAQTGISGSVTIEDDCIIGGQVGFGD
                     HIRVQSGAVIGSKAGILPGKIVRPGVWWGIPIQPLDEYKRLNAHISRLPHLREELKKL
                     NERVKSLEGESSENKE"
     gene            4527..>5279
                     /locus_tag="VIT19_08310"
     CDS             4527..>5279
                     /locus_tag="VIT19_08310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839023.1"
                     /translation="MKTLANLFLVTILLSAFTSASAQSVAEQTRPRTVSTKPKPVKVA
                     NHTRAKQEPAQKPIVESPNKSNGNRLAPNRVRARIDEAKRMFKSRPHPTAMTSPALFY
                     VTIAAMVPDNSHIHLIRIPKQTFLKKGSEMPSISNLGLPVTVRILRANGVNTAVTIFD
                     EKDRALMPLVVEYPIERKGVFHEMAYYTSGHPALLSADLTKAGQSYVNSMVDLAAKRL
                     KSKGFSVAPHLVEIAKRLCIVEHVDHERFRNEN"
BASE COUNT         1235 a         1455 c         1424 g         1165 t
ORIGIN      
        1 ccaacctggt tcgcgtccat gaagcacggg tcgcacatca tgttgcagcg attagtcagg
       61 tcaacggtca acaccgcgcc gcggccaaac ttaatattcg aagttccgtg cttatgaacg
      121 ttcgcgtctt cggcggcgcg aaagtctcga ccgaagaaca acgattcaat tcgttcgagg
      181 aatgccgggt cggtagccat cacgtcagta aactcgccat gcttcgggca agtctttcgc
      241 atgatgacct ggccgttctc ttccagaatc tgcgctttga gttcgccggg atgctggtgc
      301 atcagggtct cgagcttggt ctcgcccgaa atcaccgcgg tgcgaacttc cttgacgcaa
      361 cgcgggcaca gcgaatctgt ttctctgggg aagccaagcg gcggtgcgct tcgttcgtag
      421 gatttgagca gcggccccgg cgcccacttc ggccggatcg cttcaccttc ggggagaaga
      481 cggtttacgg attgaaaagc cttccaggca acgtctgaca gagccgagac gactttcgag
      541 ccggttacac cgggcatttt gcctttatct gactcgcctc gacgaaattg atcactaaac
      601 aatgaaacct actcctcagc gcaatccaga cgcactcacg cgcgtccggg gttattaggg
      661 cgcaaaacca tgtattagtc gccgcaaatc aagaatatga gacatcggcg atagccctca
      721 tgatagtttg gctcgccgat catagcaagc aaaaggtcgt cattccggcc gcgaaatgac
      781 aattcctcaa cgttttgagc aattctggca acaccgggtt caagctaacg gtcaaagtgc
      841 ctatactgag cgccaataat tcgcagttag tttaggagga actcacatgg ataccatcct
      901 tcgccgaacg ttccggttca tagttttcgc attgctcgtt tttctttctg ccggcgctac
      961 aactgaaatc ccggcccgag ttgctcatga agatgttgag acgttcgcct cttgcgaagt
     1021 caccaacgcg actttcatca catggtttcc gaaagaattc gaatgtccgg tatgcaagac
     1081 caagaacact ttcatggtag tcggcagcta cggaagttac atttatgcgg acccatccaa
     1141 gtatcaactg attttttggc cttataccga cactccgtct tggtacagct gcaagaagtg
     1201 tcgactgtcg atcttcatgg aagactttga acagattccg ccggataaaa ttgccgacct
     1261 gcgaaaaatg ttagagacga cgagtctgcc ggcgcagact gagcgcccgc caaagtcggg
     1321 acgcctcatg agcgatccgc cttacctcga aattccgaca gcgttaaggg tttcagttgc
     1381 cgaaaaggtc tatcaggttc tcgggaagac cggcgatgag ttttggaatc acttctatcg
     1441 agtgctcgcc taccattacg accgtcaggg taagaccgcc gaagccgaac aggcgcggcg
     1501 aaaatcaatc gcaatcacgg aaaagctttt aacgccgaaa tcgccaggga cgcgaaaaga
     1561 gctgctctac atcctcggtg ctatgcgcca ctttgtcggc gaagataccg cggcgttgaa
     1621 agctctggaa gaggccggca ctctcaccta caagaacgac gaactgccgg ctgagcgaaa
     1681 cacaaactac gacgaatact tatctaaagc gatcaaagag tacgtggaga tgctgaagaa
     1741 aggcgaaggc cccagaggga acaaaagcct gcgttcgacg agtcactgac cctgacggaa
     1801 gaactgtcca ggtaccgatg tccacttcgt gagaggcgat tcagcacaag tcatttggcg
     1861 catcgtggaa acggccgctc cagttgcgca tcgattagcg tctcgccgac agcacagatt
     1921 tccactttct tgaccgtcgg aaattgacga gcagttcgtt cgatcgcttt ggcaaagatg
     1981 aagggaccct gtgacccgta attcgtagct ccttcaggct gatagaacct gatcagggcg
     2041 acgccattct ttagggtaac gccctgcaat ctcattccga acgtaggaag agtcagtccc
     2101 cgatcttcct cttcctttga aagagtcgtg ccgaacaacc accccatcgc cagttcgagc
     2161 acattgtcac cgatacttcg tcgcgtgacg gcgaccagct ggatgtcggg cttatcgctg
     2221 ttcgcatccc acagataaat cctcgttgtt cgcgccttgg gtggtttgct gggtgccgaa
     2281 aggttcggac gccggttgta gatcactcga tttcgaagta agcgtttcag atcgtgcgtc
     2341 tcagtcttgt acggggtgac tttggttttc gagatcactt gattggaagg acccggtttc
     2401 cagcctcgct cgtcgttgat tgcttcgaaa tcgtcggcgc gataatttgc gagcgttatg
     2461 ttgtcaccat tgattgccgt tacttcagcc cacctgcgga agaaaacttc gccgcgctta
     2521 ggatcgacaa cggcgaagta cgatccgccg agcccgccgt cgcccatcgc gacgagtaaa
     2581 gcggtagccc cggtgctcgt cttcacttcc tggacggcga ctattcccac agtctcagaa
     2641 agaatcttcc ggatcgagcg agtcgcaacg ttataaatcc gcagtgactg gccttcgttc
     2701 tcgaagcctc ccgcgccgtc gtgactcgag aaaatgacgt cacgtccgtc attgatcagc
     2761 cacgcctcaa tcgcttcgtt atagatcttt cgttcgcggc ccgcgacggt gatgtagagc
     2821 ttgccgccac tgggtgtgcc cgactcgtct atccgaaaac ttgaggccct cgcgcgtgcg
     2881 gttggcggct ggctggactt cgcaaacagc gatacggcgg ctaaatgtga agcagttaag
     2941 agcgccaaag atagactcat taagcgtagt ttgtgtgaca tcaattccct cgcgatgctg
     3001 cgatgttgtt gtagaagccc gctgagatta gcaaataggt cacccagccg cacctgctgg
     3061 ttcgcggtgg gcacgcgcat cttgcgcgtg cgttcacggg cgggacgccc gtgccacttc
     3121 acctggttcg cggttctcgg gcagcgcgtt gtactatctg cgattcacga atcagttcgt
     3181 tatggctgca aacgagaaac gagtctcgga gttatcagcg cacgttggcg gtacagtcgt
     3241 cggcgacagc gaggttgtca ttcgccgcgt gaacagcctg gaggcggcga gcgaaggaga
     3301 catcgcctac gttgaggacg aaaagttctt tgccggagcg gcgcgctcga acgcgtcgtg
     3361 tgtgatcgtc ccggaaagcg ccgccttaga gttgccatgt cagatcaaag tgaagaagcc
     3421 gaagttggcg ttcgctttaa tcgccgagat cctgcatccg gcgaaacgcc gcgaatcgga
     3481 cgttcattcg tccgcggcga ttgccgacac tgctgatgtc gccttgaccg catttattgg
     3541 acctcacgtg actattggcg accgtagttc ggtcggcgtc ggcactcaaa ttctgtcggg
     3601 tgcaagcatc ggcgacaacg tctcagtagg tagtgcctgt gtaattcatc cgaacgtcgt
     3661 catttacgac gatgtgacga ttggcgaccg tgtgattctg cacgcgggtg ccgtcatcgg
     3721 cgctgacgga ttcggctacg ttcgcgacga acatagccat cacaagtttc cgcaaattgg
     3781 cacagtggtc atcgaagacg acgtcgagtt gggcgccaat acctgtgttg accgggcggc
     3841 actcggccgc acgcgcattg gcaaagggac aaagctcgac aacatggtgc atgttggcca
     3901 caactgcgat atcggcgaac gggtcgtaat cgccgcacaa accggcatca gcggcagcgt
     3961 cacgatcgaa gacgactgca tcattggtgg ccaggttggt tttggcgacc acatccgcgt
     4021 acaaagcggc gcggtgattg gctcgaaggc gggaatcctg ccaggaaaga tcgttcgccc
     4081 cggcgtctgg tggggaattc cgattcagcc gctcgacgag tacaagcggc ttaatgcgca
     4141 cataagtcgc ctgcctcacc tgcgcgaaga gttgaagaaa ctgaacgagc gcgtgaaaag
     4201 tttggaaggg gaaagctcag aaaacaagga gtaagggcga agtgatcgtc gctctggaac
     4261 gcgatacgga cacaagcctg agcgttaggg gaggtcgtga agcgtcgaaa acggtacgat
     4321 cttttttcga atcagaaact ggaaatcagc aatgcagttt ccataaaaac tctggaacga
     4381 gatgcgctct tctccagaaa agtttttgga ataagacacg taaatttcca gaaaaaaagt
     4441 cgttgacaac catctcgtcg gtgcgcgaat ctgagttccc agtcccgaac tcctcgggat
     4501 gctttcccct ccggttacaa gcaatcatga aaactttagc gaaccttttt ctcgtcacga
     4561 tcttactttc cgccttcacc agcgcatccg ctcaatcagt tgccgagcag acccgaccgc
     4621 gaactgtttc gacgaagcca aaaccggtta aagtcgcgaa ccacacgcgt gcgaagcagg
     4681 aaccggctca aaagcccatt gttgaaagtc caaacaaatc caatgggaac cgcttggcgc
     4741 ccaaccgcgt tcgtgcgcgg atcgacgaag cgaaacgcat gttcaagagc cggccgcatc
     4801 ccacggcaat gacttctcca gcgctttttt acgtgacgat cgcggcgatg gtcccggaca
     4861 attcgcacat tcacctgatc cgcatcccga aacagacgtt cctgaagaag ggttccgaga
     4921 tgccttcaat ttcgaacctc ggattaccgg tgaccgtccg cattctccgg gcaaacggcg
     4981 tcaacacagc cgttacgatc ttcgacgaaa aggaccgcgc cctgatgccg ctggtcgttg
     5041 aatatccgat tgagcgcaaa ggcgtctttc acgagatggc ctactacaca tctgggcatc
     5101 cggctttgtt gagcgcggat ctcactaaag cgggacaatc ctacgtcaac tcaatggttg
     5161 atttggcggc caaacgcctt aaatccaaag gcttttccgt cgccccgcat ctcgtggaaa
     5221 tcgcgaagag gctttgcatt gtcgagcacg tcgatcacga acgcttccgc aacgaaaat
//
LOCUS       DATDBY010000443         5230 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2671950, whole genome shotgun sequence.
ACCESSION   DATDBY010000443 DATDBY010000000
VERSION     DATDBY010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5230
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2671950"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1089)
                     /locus_tag="VIT19_08315"
     CDS             complement(<1..1089)
                     /locus_tag="VIT19_08315"
                     /inference="COORDINATES: protein motif:HMM:NF025330.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HEY5839024.1"
                     /translation="MKSKNPTSTFVMLLGLVALLSTVSVTTVAQGTWTTKPSMLGSRY
                     AFASCVADGKLYAFGGYDGDHINTVVAYDPVTGSWSSKSPMPVQRTDAEAVEAAGKIY
                     VLGGQIAGVTLTTRVDVYDPANDSWGTPVSPMPTMRTAFGLASIDGIIYAVGGTNGGD
                     LSTVEAYDPISDTWETKASMPTPHSHVGVGVINGVLYAAGSANGSLSFEAYDPATDTW
                     TVKPSMPTNRFVPGVGGLGGLLYVIGGATSGTLNTVDVYDPVTNSWSTGPAMPTDRYA
                     FGVGVTGGVLYAFGGATLTGGFTTLSTVEAFSLDEEAGPKELALDLVNVVRTFTLQRG
                     ISNSFESKLQKVIAALDSPNGTAEACDHL"
     gene            1314..1886
                     /locus_tag="VIT19_08320"
     CDS             1314..1886
                     /locus_tag="VIT19_08320"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5839025.1"
                     /translation="MAAKPNNITQLLLKWSEGRSEALEDLIPLIYPELRRLARRHMQR
                     ENPAHTLQTSALINEAYLRLVSQQGVEWHNRAHFFAVAAQVMRHILIDHARKHQVVRR
                     GGGLLRVPLDETAVASHERALEFVALDEALTKLALIDARKSQIVEMKFFGGLTVDEIA
                     EVMKLSPITIKREWRAAKAWLHLEITEQGL"
     gene            1962..4844
                     /locus_tag="VIT19_08325"
     CDS             1962..4844
                     /locus_tag="VIT19_08325"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5839026.1"
                     /translation="MQPNRWKEIDGLLQECLYLDREACAKLLNEVGERDPDLKAKVEA
                     LLAVDAEGWDFIESPALESAAPFLAHDEPQLARGDRVAHYEIVELVGRGGMGEVYVAK
                     DQILNRTVALKFLTAEYTQDHDRLLRFQREAQAASALNHPHILTIYELGNVDGQQFIA
                     TELIEGETLRQRMVGAPIPLVEALDVTIQVAGALAAAHRAGIIHRDIKPENIMLRPDG
                     YIKVLDFGVAKLAGHSDHQTGTQTPEKGDLSSGLLMGTVRYMSPEQASGRQVDQRSDI
                     FSLGVVLYEMVAGNAPFQGETPKDVVDSILDHEPQSLATRPLDIPDRLVRIVGKALSK
                     NRETRYSDANEFLSELKDAKQELDLESKFRTLSSPTLPAVPGRPNQTQQTSSVLSLAA
                     AYPIAVIKRHKTAVVLGLIALAIAAVLLVYRPAKQRPLSLGTWSEKAAMPKPRAGAAV
                     AALDGQLYVVSGMDDSGTTDSVDVYDPATDSWTSRARIPTARMAAGAVASGGKLYVFG
                     GCGRNSEGNHDCRVGTTNALEVYDPQSNAWTAKAPMPTPRSGMAAAVIEGKLYVAGGR
                     GPCPPCPGYSILEVYDPLTDTWDVSRAPMPVALTGAGGAAVNGRFYVAGGNNGGNSEL
                     RGSNFFGIYDPAIDKWEIGAPLPTGREGLGLEVVHGVLYAIGGIAYHEESNLVEAYDP
                     IQNIWTTKAALPVARAYVQPVAIKGLIYVAGTGGPVNRPLATLHAYTAVCPRSTCISP
                     PASLIGWWSGDGDMNDLAGPNKGTVQGNITFEPGKVGLAFNLDGSSFVTMGNPSALNL
                     TGNQVTISGWIKPRVSAPAVYFGKTHFGANDYLLAYGRGLASMVNANGAEFTVLGYSD
                     FPSKGNLYVPRTGEWTHVAMTYDGSTISLYANGKIVGQGPCSGAISRHDVSFNIGGRA
                     NDEGTGKFNGLIDEVQVFNRALSADEIGIIFEADAEGQCKPQASCR"
     gene            complement(4890..>5230)
                     /locus_tag="VIT19_08330"
     CDS             complement(4890..>5230)
                     /locus_tag="VIT19_08330"
                     /inference="COORDINATES: protein motif:HMM:NF012968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEY5839027.1"
                     /translation="GIKSKDNLALAEKLAEALGGDLAASRPICDADWLPIDRQIGSSG
                     QTVAPKLYIAIGISGAIQHLVGMKNSQTIVAINKDPEAPIFDIADYGIVGDLFEAVPV
                     LTEEIKKLKG"
BASE COUNT         1199 a         1430 c         1469 g         1132 t
ORIGIN      
        1 gagatggtca catgcctcgg cggttccgtt aggcgaatcg agagccgcga ttaccttttg
       61 gagtttgctc tcgaaactgt tcgagatacc tcgctgcaag gtgaaagtgc gtactacgtt
      121 caccagatcc agcgccaact ctttcggacc ggcctcctca tcaagcgaga aggcttccac
      181 agtcgaaagg gtcgtaaatc caccggtcaa tgttgcgccg ccaaacgcgt atagcacgcc
      241 accggtcacg ccaactccga aagcataccg atctgtaggc attgccggtc cggtgctcca
      301 cgagttcgtc actgggtcat acacatcgac cgtgtttagc gttcccgacg tcgcgccgcc
      361 gatgacgtac agcaggccgc ctagtccccc aacgcccggg acgaaacgat tggtcggcat
      421 cgaaggcttc accgtccagg tatcggtggc cgggtcataa gcctcgaacg acaaactgcc
      481 gttggcgcta ccggccgcat acaacacgcc gttgattact ccgacaccaa catgggagtg
      541 aggagtcggc attgaggcct tggtttccca cgtgtcagag attggatcgt aggcttcgac
      601 ggttgacagg tcgccaccat tagttccgcc gacggcgtaa atgattccat cgatcgaggc
      661 aaggccgaag gcagtgcgca ttgttggcat cggtgagacg ggcgtgcccc acgagtcgtt
      721 cgccggatcg tacacgtcga cgcgcgtcgt cagggtgacg cctgcaattt gtcccccgag
      781 gacgtaaatc ttgcccgcgg cctcgacagc ttctgcgtca gtgcgctgga cgggcatcgg
      841 cgacttcgac gaccaggagc cggtcacggg atcgtaggca acgacggtat taatgtggtc
      901 accgtcatag ccaccgaaag cgtaaagctt gccgtctgcc acacacgagg caaaggcgta
      961 acgtgagccg agcatcgagg gtttagttgt ccacgtgccc tgtgcgaccg tagtaacgct
     1021 aacagtgctc agtaacgcaa ccagtccgag cagcatgaca aaagtagatg tagggttttt
     1081 gcttttcatg attctccttt tgaaaatgaa cagaacagta attcgcggca actttgttgc
     1141 ttcgagccaa accgttccgc agatgtcact gctaatagcg tggttttttt acgagtggta
     1201 tcatcgcgtg cttttttgta cgcgggctgc cgtcaggcag cggacctatt gtgagagcca
     1261 cttcacggca gtaaatcttt tgttacaaat ctagtcgcgc catagtccaa gcgatggccg
     1321 ctaagccaaa caacatcact cagcttttac ttaagtggag cgaagggcgc tctgaggccc
     1381 tcgaggactt gattcctcta atctatccgg aattgcgccg gctcgcgcgg agacacatgc
     1441 agcgagagaa tccagcccac accctgcaaa cgtcagcgct tattaacgaa gcgtacctaa
     1501 ggttggtcag tcagcagggc gtcgagtggc acaatcgcgc ccattttttt gccgtagcgg
     1561 ctcaagtgat gcgtcacatt ttgatcgacc atgcgcgcaa gcatcaggta gtcaggcgag
     1621 gcggcggctt attacgcgtc ccactcgatg aaacggcagt tgccagtcat gagcgcgcgt
     1681 tggaatttgt ggccctggac gaggctctga caaaactggc cctcatcgac gcccggaaga
     1741 gtcaaatcgt cgaaatgaaa ttcttcggag ggttgacggt tgatgagatc gccgaagtca
     1801 tgaaactttc accgataacg atcaagcgtg aatggcgcgc ggccaaagcc tggctccatc
     1861 tcgaaattac tgagcaagga ctttgaatga aattaccgtg acccctttga ttagaatttc
     1921 gcgctaatca tctggacagt taccgctaac tgattctcgg gatgcagcct aaccgttgga
     1981 aggaaataga cggactgtta caggaatgcc tgtaccttga ccgtgaagct tgtgcgaagc
     2041 ttcttaacga agtcggcgag cgtgatcccg atttgaaagc taaggtcgag gccttactgg
     2101 cggttgatgc cgagggttgg gactttattg aaagccctgc tctggaatct gccgctcctt
     2161 tccttgcaca cgatgaacca cagctcgccc gcggcgatcg cgtcgcgcac tacgaaattg
     2221 ttgaattggt tggacgcggc ggaatgggcg aggtgtatgt tgccaaagac caaatcctca
     2281 atcgcacagt cgcgctaaag tttctcacgg ctgaatacac ccaggaccac gaccgtttgc
     2341 tccgctttca acgtgaagcg caggcggcgt ccgctttaaa ccatcctcat attcttacga
     2401 tttatgaact cggtaacgtt gatgggcaac agttcatcgc cactgaacta atcgagggcg
     2461 agactttgcg acagcgcatg gtcggggcgc ccatcccctt agtcgaagct ctggacgtta
     2521 ccattcaagt tgctggagcc cttgccgccg cgcaccgcgc aggaattatt caccgggaca
     2581 taaagcctga gaacatcatg ttgcgtcccg atggatacat taaggtgctg gacttcggcg
     2641 tcgccaagct tgcgggccat tcggatcacc aaacaggaac gcagacacct gagaaaggag
     2701 atttgtcatc cggcctctta atgggaacgg ttcgctacat gtcacccgaa caagccagcg
     2761 gcaggcaagt tgatcagcgt agcgacattt tcagtttggg agtcgtgctt tacgagatgg
     2821 tcgcgggcaa tgcgccgttt caaggcgaaa ctcccaagga cgttgtggat tcaattttgg
     2881 accacgaacc ccaatcacta gccacgcgtc cgctcgacat tcccgaccgg ctggtgcgaa
     2941 tagttggcaa agctctgagt aagaaccgcg agacgagata ctctgatgca aatgaatttc
     3001 tgagtgagct taaggacgct aagcaggagc ttgatcttga gtcgaagttc aggacgctat
     3061 catcaccgac gctaccggca gttcccggca ggccgaatca aactcaacaa acgtcaagcg
     3121 tcttatcgct tgcagcggcc tacccaatcg ccgttatcaa aagacataaa accgccgttg
     3181 tgctcggact aatcgcgttg gcgattgctg ctgtcctatt agtttatcgc cccgccaaac
     3241 agaggccttt gtccctggga acatggtccg aaaaggcagc gatgccgaag ccgcgagcgg
     3301 gggcggctgt agcggcgctg gatggtcaac tctatgtagt ctcgggcatg gacgattccg
     3361 gcacgacaga ttccgtggac gtctatgacc ccgccactga tagctggact tcacgggcgc
     3421 gcatcccgac cgctcgcatg gcggccgggg ccgtcgcatc tggcgggaaa ctgtatgtat
     3481 ttggcgggtg tggcaggaat tccgaaggca accacgactg ccgagtgggc acaacaaacg
     3541 cgctggaagt ctatgaccca cagagcaatg cgtggacagc caaagcgcca atgccaactc
     3601 ctcggagtgg aatggcggcg gcagtgatcg aagggaagct ttatgtcgcg ggcggacgcg
     3661 gtccgtgccc accttgtccg ggctacagca ttctcgaagt gtatgatccg ctcactgata
     3721 cctgggacgt gtcacgagct ccaatgccgg tagcgctcac cggtgccggt ggggccgccg
     3781 tcaatggcag gttctatgtc gccggcggca ataatggagg aaactctgaa ctcagaggca
     3841 gcaacttttt cggtatctac gatccggcaa tcgataagtg ggaaattggt gccccattgc
     3901 caacgggccg agaaggactc ggactggaag tggtccatgg cgttctctat gcaatcggcg
     3961 gcatcgccta ccacgaggaa tctaatctcg ttgaggcata cgacccaatc caaaacatct
     4021 ggaccaccaa agcagctctg cccgtcgccc gcgcttatgt gcagccagtc gcaatcaaag
     4081 ggttaatcta cgtggcggga actggtggac cggtaaatcg gcctttagct acgcttcacg
     4141 cgtacacggc agtgtgcccc cgttcgacct gtatctcacc gccagccagc ttgattggct
     4201 ggtggtcagg tgatggagac atgaacgatc tggccgggcc gaacaaaggc accgtgcaag
     4261 gcaatattac cttcgaacca ggcaaagtcg gccttgcatt caacctggac ggatcatcat
     4321 tcgtaacgat gggaaatcca tctgcgctta atttgacagg caatcaagta actatcagcg
     4381 gctggataaa gccgagagta agtgctcccg ccgtttattt cggaaagacg catttcggcg
     4441 ccaacgatta tctgctggcg tacggtcgag gccttgcctc gatggtgaat gcgaacggcg
     4501 ctgaatttac cgtactgggc tactctgact ttccgtcaaa gggaaacctc tacgttccac
     4561 gaactggcga gtggacacat gtcgcaatga cctacgatgg atcgacaatc agcttgtatg
     4621 ccaacggtaa gattgttggg caggggccgt gttcgggagc tatcagccgt cacgacgtct
     4681 cctttaacat cggcggcagg gccaatgatg aggggaccgg taaattcaac gggttaatcg
     4741 acgaagttca ggttttcaat cgcgcgctat cggcggatga gatcgggatc attttcgaag
     4801 cggacgccga aggtcagtgc aaaccgcagg ctagttgtcg atgaaaagtc gactctactc
     4861 agtgagttcc ggagaatcct gagagacact caacctttga gcttcttgat ttcttcggtg
     4921 agcaccggca cagcttcaaa gagatcgccg acgatgccgt aatccgcgat gtcgaagatg
     4981 ggagcttccg gatccttgtt gatggcgaca atggtctgcg agttcttcat cccgaccagg
     5041 tgttgaatcg cgcccgagat tccaatcgcg atgtaaagct tcggcgcgac cgtctggccg
     5101 gacgatccaa tctgccgatc gattggcagc cagtccgcgt cgcaaatggg ccgcgatgcc
     5161 gcgagatcgc cgcccagcgc ttcagctaat ttttccgcga gcgccagatt gtctttgctc
     5221 ttgattccac
//
LOCUS       DATDBY010000444         2118 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_242572, whole genome shotgun sequence.
ACCESSION   DATDBY010000444 DATDBY010000000
VERSION     DATDBY010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242572"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..756)
                     /locus_tag="VIT19_08335"
     CDS             complement(<1..756)
                     /locus_tag="VIT19_08335"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY5839028.1"
                     /translation="MCSQAPTEESAAFDEIYAQVPPEQVARLKDFRRTHPYKQLTINN
                     PNGDTKWEYISCGQGNDTLLLLPGALSVGESVFPFIEAFENEYRIIAPSYALALTMSG
                     LCDGIAQILEKEGLNHAHVIGGSYGGLVAQYFARQYPNKTRSLVLSHTFVLSPKLAKP
                     LWIAGKLFPTLPRKLFAPILRLRLNKMLVSTLRATNHPETEFWRAYLNEAIASDLLKE
                     VFIHQNNCLLELARQPQFMPDDLKGWPGKVLIIE"
     gene            complement(1020..>2118)
                     /locus_tag="VIT19_08340"
     CDS             complement(1020..>2118)
                     /locus_tag="VIT19_08340"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5839029.1"
                     /translation="VTTIRTTGSVQPHLDLEIKKLIDGGRMIGPKMHITAPYLEGAGA
                     FTPVMRQLKDADDARRLVNYCADQGATSFKAYMNITREQLRATVEEAHKRGLKVTGHL
                     CSVGYREAAEIGIDNLEHGLLANSEYVPNKQPDKCPNGVSASLRNLDIQSEPVKETIR
                     VLVAKNVAITSTLPVFEAGAPLVSSGGTGVGGVGGVNPTAIGASSAVLNSRVLNVMNP
                     DARLRYLNARARISADSPTPILIRKSMEFERAFVAAGGLLIAGLDPTGNGGIVAGFGD
                     LRQVELLVEAGFTPVEAIKIASFNGAKFLGEDSRIGSIAVGKQADLMIVKGNPALKIT
                     DIENVEIVFKDGVGYDSEKLIQSVQGLVGVR"
BASE COUNT          441 a          618 c          581 g          478 t
ORIGIN      
        1 ttcaatgatg agaactttgc ccggccatcc tttcaaatca tcaggcatga attgcggttg
       61 acgggccagc tcaagcaggc agttgttctg atggatgaaa acttccttca gcaagtcaga
      121 ggcgattgct tcgttaaggt aagcgcgcca gaactccgtc tcaggatgat tggtagcgcg
      181 cagcgttgag accaacatct tgttgagccg caatctcaga atgggcgcga acaactttct
      241 tggaagcgtg ggaaaaagtt tgcccgcaat ccacaatggt ttcgccagct tcggagaaag
      301 tacaaaggtg tgagacagaa cgaggctacg ggttttgttt ggatactggc gagcaaaata
      361 ttgcgccaca agcccgccgt atgaaccacc gattacgtgc gcgtgattca gcccctcctt
      421 ttccagaatc tgagcgattc catcgcacaa tccagacatc gtcagtgcga gcgcatacga
      481 aggcgcgatg atgcgatatt cgttttcaaa ggcctcgatg aacgggaaaa ccgactcgcc
      541 tacggatagc gcgccaggca gtaagagcag agtgtcgttt ccctgcccac aggatatgta
      601 ctcccacttc gtatcgccgt tcggattgtt aatagtgagc tgcttgtaag gatgagtgcg
      661 ccgaaaatct ttcaggcggg caacttgttc cggcggaacc tgcgcgtaga tctcatcgaa
      721 cgctgcgctt tcttctgtgg gtgcttgcga acacattatt ggagtttcat tcagttcctg
      781 aaagcgaacg gaattgaata cgacgagcga ttcatttgac gagtaggctg tcgcccgctt
      841 cgcgggctgg atggattctt gccgactgaa cctggggctc acgccccagg ctttatgcta
      901 acgcctgctc cgcaggctct tggtttgcat ctgccatgct ttcgtcgctt cgcggacttc
      961 aaggtcccgg cactgatcct atcttgggca cggcgattcc gctttcctac tccgcccact
     1021 cacctaaccc ccaccaagcc ctgcaccgac tgaatcagct tctccgagtc atatccgacg
     1081 ccgtctttga aaacgatttc gacgttttcg atgtcggtga tcttcaaagc ggggttgcct
     1141 ttaacgatca tcaggtcggc ttgtttgccg acggcgattg agccgatgcg ggaatcctcg
     1201 ccgagaaact tcgcgccgtt gaatgaagcg atcttgattg cctcgactgg cgtgaagcct
     1261 gcttcgacga gcagctcaac ctgacgcagg tcaccaaagc ctgcgacgat ccctccgttg
     1321 ccggtcggat cgaggccggc gattaataaa ccaccggcgg cgacaaacgc gcgctcaaat
     1381 tccatcgact tgcgaatcag gattggcgtc ggcgaatcgg cagagatgcg cgcgcgcgca
     1441 ttcaggtaac gcagacgcgc gtcgggattc atcacattca gcacgcgcga attcagaacc
     1501 gcgctcgatg cgccgattgc agtcgggttg acgccgccca ctccgcctac acctgtacca
     1561 cccgacgaca ccagcggcgc acccgcttcg aataccggca gcgtcgaagt gatcgccacg
     1621 ttcttcgcca ccagcacccg aatcgtttcc ttcaccggct cgctctggat atcgagattg
     1681 cgcagactgg cggagacgcc gttcggacac ttgtcgggct gcttgttcgg aacgtattca
     1741 gaattggcga gcaggccgtg ctccagattg tctatgccaa tctcagccgc ttcgcgatag
     1801 ccgactgagc acaggtggcc ggtgactttc aggccgcgct tgtgcgcttc ttcgaccgta
     1861 gcgcgcaact gttcgcgcgt gatgttcatg taggctttga aagaagtcgc gccttggtca
     1921 gcacagtagt tcaccagccg ccgcgcgtcg tccgcgtcct tgagctgacg catcaccggc
     1981 gtgaacgcgc cggcgccttc gaggtaaggc gcggtgatgt gcatcttcgg cccaatcatc
     2041 cggccgccgt cgatcagctt cttaatctcc aaatccagat gaggctgcac gctgccggtc
     2101 gtgcgaatcg tcgtcacg
//
LOCUS       DATDBY010000445         4442 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2301041, whole genome shotgun sequence.
ACCESSION   DATDBY010000445 DATDBY010000000
VERSION     DATDBY010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4442
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2301041"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..987
                     /locus_tag="VIT19_08345"
     CDS             <1..987
                     /locus_tag="VIT19_08345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839030.1"
                     /translation="CTWIPMLFFLLVAPPDSATGSLAGVKTVFLFLGTAHVPATLFFY
                     SDKTFRGVISQHRLRYIVVPILLIVTTGILFAVLNGTGHAWLLLTYWAWQAFHYGRQN
                     IGVYAFASIAESGAAPLRIEKLAIDFGTILGILGTFKILGATTAPTFLHQHFDLLYKV
                     GAIAFIAVAGFSLVIYFKLFQRMTLLKTLFFFTSVFFFLPVFLSTQMNIAFLSYAIAH
                     GLQYLVFMGIVSAKATDGEQSRSISYRGILTLSVLVFVAGFAFWRVGDLGTFGVIKTS
                     ASLTVLANFLFGAVLGATMSHFIVDASAWKLSLAPQRAYITKRFDFIFNKTR"
     gene            complement(1078..2088)
                     /locus_tag="VIT19_08350"
     CDS             complement(1078..2088)
                     /locus_tag="VIT19_08350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839031.1"
                     /translation="MKKLVVTLFVVLFFSGVGFSQPTLTIVTETPGLPSELFYGSVKV
                     KPVRMRPPGATLPFWCIGAANTAITIDDCDFFVQQQYIDFLKRFPEAGPDNTYGTNDD
                     PLRFYIDILAGCNPNDAECNRFARGSVSANFFRSPEFQRKGNYVMYLYMVSIGQRPAT
                     PAELSDNTKVDRPLYPEFMSDLASISTPNDDPTLTETLKNNLASNWLARPEIVAVYSS
                     LNGAQFVQKLRDVSGVNPAGSAGWASDIDTAAKTKAQVLRLFAESPEVDTKFFKQSFV
                     TMEYFGYLRRKPEDCHGHPDPINCGYIFHNNRFTLHPDPAVIQNIIVRGFIESPEYRG
                     RF"
     gene            2330..3949
                     /locus_tag="VIT19_08355"
     CDS             2330..3949
                     /locus_tag="VIT19_08355"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY5839032.1"
                     /translation="MTPSEINVDQLMRQIRQAVAQRAGETSRNGEPTPPAAENVEQPV
                     GQIDGSRLTLQPDFQASQNNGYHANDLLKYHGETFVRNAYRAILKREPDADGMGQNLA
                     KLADGKFNKIDVLASLRYSAEGEQAGVNISGLAWPATVRRIERVPVIGYLVQVAIALT
                     RLPAMLTHQRQYEFYALARQEQIVDYANRINESNAQLAERANEFSARALTIENDIRGQ
                     QQALESVHGESKSALGALQNEIVATSATLRDVEARAAALASQLSETAATLETAIADQK
                     STQTHWQEEFQTLTTARQQLLQELGVQQRRLEDLYELAQVQTGLNEEGLDELYAAFED
                     QFRGEREEIKTRLRVYLPILERANATQDLLDIGCGRGEWLELLRESGKQGRGVDHNRV
                     FIERCQRLGLDVVQRDAIAYLSELPDASLDAITSFHLVEHLPFKVLMQLLDEMARVLR
                     PGSPLILETPNPENFIVGSHTFYADPTHRNPIPSATLSFLLASRGLTDIEVMHVRPWE
                     EAKIAGDDELTKRFNEYFYGSPDYGIVGWKK"
     gene            3970..>4442
                     /locus_tag="VIT19_08360"
     CDS             3970..>4442
                     /locus_tag="VIT19_08360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839033.1"
                     /translation="MLQKQIVIVTPWFDGFVGGAGTLAKGLAYGLNRRGVHTSVFTTC
                     SRSPYDDWWRDHHAAGRSEVAGIETHRFPVNRVRAPYDATIRKITESTSLTTDDEQNF
                     FKYGINSDELVEALARRLDDGHEVLALPYFQGLTHSAINRHPGKISLIPCFHDEP"
BASE COUNT         1006 a         1245 c         1205 g          986 t
ORIGIN      
        1 tgtacctgga taccgatgct cttttttctg ctggtcgccc ctccggattc agcgactggc
       61 agtctcgccg gcgttaagac cgtctttctc ttcctcggca ccgcgcacgt tccggcaacg
      121 ctcttttttt attccgataa aacatttcgc ggcgtcatca gccagcatcg attgcgatac
      181 atcgtcgtcc ccattctgct aatcgtgacc accggtatct tgttcgcggt actgaacggc
      241 accggccatg cgtggctcct gctgacctat tgggcgtggc aggcatttca ctacggccgg
      301 cagaacatcg gcgtttacgc tttcgcgtcg atagctgaaa gcggagctgc gccgcttcgc
      361 attgaaaagt tggcaattga tttcggaacc atcctcggca ttctgggaac tttcaaaatt
      421 cttggcgcga cgactgcgcc gacgtttctc caccagcatt ttgatttgct ttataaggtc
      481 ggagcgatag cattcatcgc cgtcgccggc ttcagcctgg tgatctactt caagctcttc
      541 cagcgaatga cgctcctgaa aaccctgttc ttcttcacgt cggttttctt tttcctgccg
      601 gtctttcttt ccacgcagat gaatattgct ttcctcagct atgcgatcgc gcacggactt
      661 caatacctgg ttttcatggg tatcgtttcg gcaaaggcaa cggacggcga gcagtcgcgc
      721 tcgatttctt accgcggcat cctgacgctc tctgttttgg ttttcgttgc cgggttcgcc
      781 ttctggcgcg tcggagattt ggggacgttt ggagtgatca agacgagcgc gtctcttacc
      841 gtgctggcga acttcctctt tggcgcggtg ctcggcgcga cgatgtcaca ctttatcgtc
      901 gatgcgagcg cttggaagtt aagcctggcc ccacagcgcg cctacatcac gaagcggttc
      961 gatttcatct tcaacaagac acgctaaggc gccggtccga gaaatcgatg accataaaat
     1021 caaacgaggc cggcgcgaac gccagcctcg aaagaagttt tggctttgtt tacagactta
     1081 gaatcggccg cggtattcag gcgattcgat aaagccgcgc acgataatgt tctggatcac
     1141 ggccggatcc ggatggagag tgaagcggtt gttgtggaag atgtatccgc agttgatcgg
     1201 atcaggatga ccgtgacagt cttccggctt gcggcgcaga taaccaaaat attccatggt
     1261 gacgaaagac tgtttaaaga acttggtatc aacctcagga ctctcagcga acagccgcaa
     1321 aacctgcgct ttcgtcttag cggcggtgtc aatatccgag gcccaacccg cactccccgc
     1381 cggattcaca ccggaaacat ctctcaactt ctgcacgaac tgcgcgccat tcaaactgct
     1441 gtaaacggct acgatctcag gtctcgctaa ccagttgctg gccaggttgt ttttcaacgt
     1501 ttcggttagc gtcgggtcgt cattgggcgt cgaaatactg gcgaggtcgg acatgaactc
     1561 ggggtaaagc gggcggtcaa ctttagtatt gtcgcttaac tcggcaggtg tcgcaggcct
     1621 ttgcccaatc gagaccatgt aaaggtacat gacatagtta ccttttcgct gaaactcagg
     1681 cgaacggaag aagttcgccg acactgagcc gcgcgcgaat cggttacatt ccgcgtcatt
     1741 cggattacat ccggcaagaa tatctatata gaacctcaac gggtcgtcgt tcgtgccgta
     1801 cgtgttgtcc ggtcctgctt caggaaagcg cttcaggaaa tcgatgtact gttgctgcac
     1861 aaagaaatcg cagtcatcga tcgtgatcgc ggtgttggca gcgccaatgc accagaacgg
     1921 aagcgtcgct cccggtggtc gcatgcgaac aggcttgacc ttcacactgc cataaaacaa
     1981 ttccgaggga agacctggcg tctctgtaac gattgtcagc gtaggctggc taaaaccaac
     2041 gccgctgaaa aacaaaacga cgaacagggt gaccacaagc tttttcatac aattaactcc
     2101 aaataactat gagggtccac tagtcttagt agcctgaggc gtggctagtt gattacgaaa
     2161 aatacctttc cgactcaccc tttgtcaacc aatctctcta agatgctcct ggcgaatcgc
     2221 gcaatgctga cgaccaccga cttaaagtta tcgcgccgct tgggatagaa ttccgaaacc
     2281 acgctttcgt ctggacgatt aagcctaagg tttggtcgaa aaactacgca tgaccccgtc
     2341 cgaaatcaac gtagaccagt tgatgcgcca gatacgtcag gctgttgccc agcgtgccgg
     2401 cgaaacctcg cgaaatggcg agccgactcc gccggcggcc gaaaacgttg agcagcccgt
     2461 cggtcaaata gacggatcgc gcctcaccct ccaaccggat tttcaggcgt cgcagaataa
     2521 cgggtatcac gcgaacgatc tgttgaagta tcacggcgag acgtttgtga gaaacgctta
     2581 tcgagcaatt ctcaaacgcg aacctgatgc ggacggaatg ggtcaaaatc tggcgaaact
     2641 cgctgacggc aagttcaaca agatcgatgt actcgcaagc cttcgttact ccgcggaagg
     2701 cgaacaagcc ggcgtgaata tctcagggtt ggcgtggccg gcgaccgtgc gacggattga
     2761 gcgcgtcccg gttatcgggt atctggttca agtcgcgatt gctctcacgc gtctgcccgc
     2821 gatgttgacg catcaacggc aatacgaatt ctatgctctg gcgcggcagg aacagatcgt
     2881 tgattacgcc aaccgtatca acgagagcaa tgcacaattg gccgagcggg cgaatgaatt
     2941 ttccgcccgc gctttgacca tcgaaaacga cattcgcggc caacagcaag cactcgagtc
     3001 tgtgcacgga gagagcaagt ctgcactggg cgctctacaa aatgagatcg tcgccaccag
     3061 tgcgacattg cgtgacgtcg aagcgcgtgc cgccgcgctc gcgtcgcaac taagcgaaac
     3121 agcggcgacc ctcgagaccg ctatcgctga tcagaaatct acgcagacgc attggcagga
     3181 agaattccag acgctgacga ccgcgcgcca gcagctgctt caggaattgg gagtacagca
     3241 gagacggctt gaagacttgt atgagctcgc ccaggttcaa accgggctca acgaagaggg
     3301 gctcgacgaa ctctatgcgg cattcgaaga tcaatttcgc ggcgaacgcg aggagatcaa
     3361 gactcgtctg cgcgtttacc tgcccattct tgagcgcgca aatgcgacgc aggatctgct
     3421 cgacatcgga tgcgggcgcg gcgagtggct ggaacttttg cgcgagagcg ggaaacaggg
     3481 acgaggtgtg gatcacaacc gggtcttcat cgaacgctgc cagcgcctcg gcctggatgt
     3541 cgtgcaacgg gacgcgatcg catacctgtc agaattgccc gacgcaagtc ttgacgctat
     3601 tacgtcgttt catctcgtcg aacacttgcc cttcaaagtg ttaatgcagc tgctggatga
     3661 gatggcccgc gtgcttcgcc cgggctcgcc gctgattctc gaaaccccaa atccggaaaa
     3721 cttcattgtg gggagccata ctttctatgc cgatccaact caccgcaacc cgattccgag
     3781 cgccacgctt agcttcctgc ttgcatcgcg cggtctcacc gatatcgaag tgatgcacgt
     3841 gcggccttgg gaagaggcga aaatagccgg cgacgacgaa ctgacgaaac gcttcaacga
     3901 gtatttttac ggctcgccgg attacggcat tgtcggctgg aaaaaatagg cagggccggt
     3961 taactctcag tgctccagaa acaaattgtc attgtgacgc cgtggttcga cggcttcgtc
     4021 ggaggcgccg ggacgctggc gaaaggcctg gcgtacggac tcaatcgccg cggcgtgcat
     4081 acatcggtgt tcaccacctg ctctcgctcg ccttacgacg attggtggcg cgatcatcac
     4141 gcggccggcc gcagcgaagt agccggcatc gaaacgcacc gcttccccgt aaaccgggtg
     4201 cgggcgccct acgatgcgac gatcagaaag atcacagaaa gcactagcct gacgacagac
     4261 gacgaacaga actttttcaa gtacggcatc aatagcgatg aactcgtcga ggccttggcc
     4321 aggcggttgg acgacggtca cgaagtgctg gcgcttccct actttcaggg cttgacgcat
     4381 tctgcgatta accgccatcc cggaaagatc tctctgatac cgtgctttca cgacgagccg
     4441 ca
//
LOCUS       DATDBY010000446         2308 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_436145, whole genome shotgun sequence.
ACCESSION   DATDBY010000446 DATDBY010000000
VERSION     DATDBY010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2308
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436145"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            365..>2308
                     /locus_tag="VIT19_08365"
     CDS             365..>2308
                     /locus_tag="VIT19_08365"
                     /inference="COORDINATES: protein motif:HMM:NF021653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HEY5839034.1"
                     /translation="MSRELIVSMNGREKKIAIIENDRVTEFYIERGEENQGIVGNLYK
                     GRVMRVLPGMQSAFVDIGLERDAFLYVSDFFDEEAEFERIVVDSAKKGDAVGAEKAAA
                     EKIAQARIEREHHIEATHERVDPLREAEVEVDAESESEAVAEAPEEETEETGARRRGR
                     RGGRGRKRVTKAEAEPAREERSLIPHPVEPFDTPFVSAASFERVSDDEGVMNGEMLKD
                     ARLQERIMDEVHAAEFDLEDVPSAPVGSLLEDFRESGEFQRVADSEDAEVAAARPRAI
                     EEAHVRDFVDEVVDESSRGAAFQRVSDDEDASANAESTAELPSPPSSTRSRRKTGVIS
                     RFFKSKKAEETSDEAGTGSEDAASEDINADADAGLTTGRTHEEFATRRGGRRRRKPKA
                     AGGAETGETNGQEAEGEVVEADEAQPEEAQPEEEPQPIAAVEPESESESDTNETEETG
                     PAARSSRRTPPAPRGGPRRRNPRHERKQVAISDLLKEGQEILVQIAKEPIAKKGARIT
                     SHIALPGRFCVYMPTVEHLGVSRKIDSDSERARLRKLIQKIHAEEDVPSGGFIVRTAG
                     VGAKEDELREDARYLIRTWQDMRQKAEKSKAPALVHRDLDLVQRILRDQLSEDFSAIR
                     IDNEEEYERVVEFVNRVQPKLVKR"
BASE COUNT          568 a          653 c          720 g          367 t
ORIGIN      
        1 tgcacgaacc gcaatccagg tttcagagcg cgtcctattt ggtaacgctt ggctccctgg
       61 cccaacgaaa ttaaggctgc ggttcgcgac ggagtttcct gttgaatcaa ctcgaaggcc
      121 acccggctca ccgagtggca ctgatcgcag cgcagcccga ccatctgagg ctgccgagtc
      181 cccgaataga gggacccgcg aaagcgcctg agcgcgcgac aaattcattg ccggcacttt
      241 ctgccggcga tttccaatca caaaccaatc gaaaaacgcg agtcacgacg aatcgggatt
      301 cgcgaaccgc acgcaggacg catgcgcccc aatgggcggc gcgcgcgctg cagaaggaaa
      361 accaatgtca agagagttaa ttgttagtat gaacggtcgc gagaagaaaa tcgcgatcat
      421 cgaaaatgac cgcgtcacag agttctacat cgaacgcggc gaagaaaatc agggcatcgt
      481 cggcaacctt tacaaaggac gcgtcatgcg cgttctgccc ggcatgcaat ccgcgtttgt
      541 cgatatcggc ctggagcgcg atgcgttcct ctacgtatca gatttctttg atgaagaagc
      601 cgagttcgaa cgcatcgtcg ttgacagcgc aaagaagggc gacgccgtgg gagccgagaa
      661 agctgccgcc gaaaagattg cgcaggcgcg catcgaacgc gagcatcaca tcgaagcaac
      721 ccatgaacgc gttgatccgc tgcgcgaagc tgaggttgaa gttgacgccg aatctgaatc
      781 tgaagcagtt gctgaagctc ctgaagaaga aaccgaagaa accggcgccc gtcgtcgcgg
      841 ccgtcgcggc gggcgtggcc gaaaacgtgt aacgaaagcc gaagccgagc ccgcccgcga
      901 agaacgcagc ttgattccgc acccggtcga gccattcgat acgccgttcg tttcggcggc
      961 ttcgtttgaa cgcgtgagcg atgacgaagg tgtcatgaat ggcgagatgc tgaaagatgc
     1021 gcggctacaa gaacgcatca tggatgaagt ccatgcggct gagttcgatc tcgaggatgt
     1081 gccgagtgcg ccggtgggat cgctcctgga agactttcgc gaaagcggtg aatttcagcg
     1141 ggtggcggac agcgaagatg cagaagtcgc cgccgcgcgg ccacgagcca ttgaagaagc
     1201 gcatgttcgc gatttcgtcg atgaagtagt tgacgaaagt tcgcgcggcg cggccttcca
     1261 acgagtcagc gatgacgaag atgcctcagc caacgccgaa tcaaccgctg agcttccatc
     1321 gccaccgtcg agcacgcgtt cgcggcgaaa aacgggcgtt atcagccggt tcttcaaatc
     1381 aaaaaaggct gaagaaacat cagacgaagc aggaactggc tctgaggatg ctgcgagcga
     1441 agacataaac gccgacgcgg acgccggcct cacgaccggg cgcacgcacg aagagtttgc
     1501 gacccgccgc ggcggaaggc gacgacgaaa gccaaaggcg gctggaggcg cggaaaccgg
     1561 ggagacgaac ggtcaggaag ctgagggcga agtcgtcgaa gccgacgaag cccagcctga
     1621 ggaagcccag cctgaggaag agccgcaacc gattgccgcg gtggaacccg aatctgaatc
     1681 tgaatctgat accaacgaga ctgaagaaac cggtccggcg gcgcgatcga gtcgccgcac
     1741 gccaccggcg ccgcgcggcg gcccgcgccg tcgaaatccg cgacacgaac gtaaacaagt
     1801 cgccatcagc gacctgctta aggaaggcca ggaaatcctc gtccagattg cgaaagagcc
     1861 gatcgccaag aagggcgcgc gcatcacttc gcacatcgca ctgccgggac gcttttgcgt
     1921 ttacatgccg acggtcgagc acctcggtgt ctcgcgcaag atcgattccg acagtgagcg
     1981 tgcccggctg cgaaagctaa tccagaaaat tcacgccgaa gaagatgtgc cgtcgggagg
     2041 gttcatcgtt cgcaccgccg gggtgggcgc gaaagaggac gagttgcgcg aggacgcgcg
     2101 ttacctgatt cggacgtggc aggacatgcg gcagaaagcc gagaagtcga aagccccggc
     2161 cctggttcat cgcgatctcg atttggtgca gcgcatcctg cgcgatcagc tttccgaaga
     2221 cttcagcgcg attcgcatcg acaacgaaga ggaatacgag cgcgtggtcg aatttgtgaa
     2281 ccgcgtgcag ccgaagctgg tcaagcgg
//
LOCUS       DATDBY010000447         2014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_467419, whole genome shotgun sequence.
ACCESSION   DATDBY010000447 DATDBY010000000
VERSION     DATDBY010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_467419"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..806)
                     /locus_tag="VIT19_08370"
     CDS             complement(<1..806)
                     /locus_tag="VIT19_08370"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY5839035.1"
                     /translation="MKYLNPLKLRTIAATLVAFAFIASAVAPLRAQQPPAQDKGTSRS
                     KVERKNRAPVSKEVLRVKLPKAVEVVLDNGLTVMILEDHRFPVVNMNLQMSGAGPIFD
                     PADKPGLANLTSQMLREGTKTRNSRQIAEEIDKLGATLGANSGFGSTAASVNASGLSD
                     NFDQWFGLMADMLMNPSFPADEFGKLKARQKTALMQQRTQPGFLSQERFRRVVYGNHP
                     AAVFSTTPAVLDSLTPEMLAAWHRERYVPQNAVLGIAGDVKASEVIAKLKT"
     gene            complement(872..>2014)
                     /locus_tag="VIT19_08375"
     CDS             complement(872..>2014)
                     /locus_tag="VIT19_08375"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY5839036.1"
                     /translation="FAHLFEHMMFQGSENVGKGEHFILVDMNGGSMNGTTNADRTNYF
                     QALPANQLDLGLFLEADRMKSLVINQANLDNQRNAVQEERRLGVDNVPYGKTFETILD
                     TAYDNFAYKHSTIGSMADLNAAEVKDVADFFRIYYAPNNAVLTLVGDFKTDEALAKVK
                     KYFEAIPSQPQPPAPDMTEPEQKAERRANIDDGFARTPRVDIVYKIPQGNTTDYYALS
                     LLGQILSSGQSSRLYQKLVKERELAAQVGAGAQERRGPSLFSVTAIVPPGKQLADVEK
                     VIYEEIERVKSEPVADWEIEKVRMGIRRSRAQQLQGTLSRAVTLGILAVYYGDANLIN
                     EIEGKYKSVTKEDLQRVARAYLKDTNRTVITTVPKPRATAPTTGSN"
BASE COUNT          387 a          580 c          571 g          476 t
ORIGIN      
        1 gtcttcagct tcgcaataac ctccgaagcc ttcacgtcgc ccgcgatgcc gagaactgca
       61 ttctgcggca cataacgttc gcggtgccac gccgccagca tctccggggt cagcgaatcg
      121 agcaccgccg gagtcgtgga aaaaacggct gcgggatgat tcccgtaaac gacgcgccgg
      181 aaccgttcct gggaaagaaa accaggctgc gtgcgctgtt gcattagggc ggtcttctga
      241 cgcgccttca gttttccaaa ctcgtctgcg ggaaaactcg gattcatcaa catgtcagcc
      301 atcagcccga accactgatc gaagttgtcg gacaatccgg aagcgttgac cgacgcggcg
      361 gttgagccga aacccgaatt agcgccaagc gtcgctccga gtttgtctat ttcttcagcg
      421 atctggcgac tgttgcgcgt cttcgttcct tcgcgcagca tttgcgacgt cagattggcg
      481 aggccgggct tatcggccgg atcaaaaatc ggacccgcgc cgctcatctg caaattcatg
      541 ttgacgacgg gaaagcgatg gtcttccagg atcatcaccg tcaagccgtt gtcgagcacc
      601 acttcgacag cttttggcaa cttcacgcgc aagacttctt ttgacaccgg agcgcggttc
      661 tttcgttcga ccttgctgcg cgaggttccc ttgtcttgtg ccggcggctg ttgggctcgc
      721 aaaggagcca cggctgatgc gatgaaagcg aatgcgacca gggtcgcggc aattgttcta
      781 agcttcaatg gattcaggta cttcatttct cctcctgaca aatctaccta atcaggttta
      841 agccgccgac gaatcagcgg gcatgatttc gttagttaga accggtagtc ggcgcggtgg
      901 cgcgtggttt cggcaccgtt gttatgaccg tgcggttcgt atctttcaaa taagcgcgcg
      961 ccacgcgttg aagatcttct ttcgtgacgc tcttgtattt gccttcgatc tcgttgatga
     1021 gattcgcatc gccgtaatac accgcgagaa ttccgagagt cacggcgcga ctcaaagtgc
     1081 cctggagctg ctgcgcgcgc gaccggcgaa tgcccatgcg gaccttctca atttcccaat
     1141 cggcgaccgg ctcactcttc acgcgctcga tttcttcgta gatcactttc tcgacatccg
     1201 cgagttgctt gccgggaggt acgattgcgg tcaccgagaa gagcgacggc ccgcgacgtt
     1261 cctgcgcacc tgcgcctacc tgcgccgcga gttcgcgttc tttaaccagc ttctggtaca
     1321 gccgcgagga ctgaccgctg gacaaaatct gtccgagcaa gctcagcgcg tagtaatccg
     1381 tggtgttgcc ttgcggaatc ttgtagacaa tgtccacgcg cggcgtgcgc gcgaagccgt
     1441 cgtcaatgtt cgcgcgccgc tcggctttct gttccggttc ggtcatgtcg ggcgcgggcg
     1501 gttgcggttg cgacgggatc gcttcgaaat actttttcac cttggcgagg gcttcgtcag
     1561 tcttaaagtc gcccaccagg gtcagcaccg cattgttcgg cgcgtagtag atccggaaga
     1621 agtcggccac gtccttcact tccgcagcat tcaggtcggc catcgatcca atcgtcgaat
     1681 gcttataggc gaagttgtcg tacgcggtgt cgagaatagt ctcgaaagtt ttgccgtacg
     1741 gcacattgtc aacgccgagt cgtcgctctt cctgtaccgc attacgctgg ttgtccaggt
     1801 tggcctggtt gatgaccaga ctcttcatgc gatcggcttc gaggaacagg ccgaggtcga
     1861 gctggttcgc cggcagcgcc tgaaaatagt ttgtgcggtc ggcgttggtg gtgccgttca
     1921 tcgagccacc gttcatgtca accagaatga agtgctcgcc tttgccaacg ttctctgagc
     1981 cctgaaacat catgtgctcg aaaaggtgag caaa
//
LOCUS       DATDBY010000448         2573 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_791672, whole genome shotgun sequence.
ACCESSION   DATDBY010000448 DATDBY010000000
VERSION     DATDBY010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_791672"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..343
                     /locus_tag="VIT19_08380"
     CDS             <1..343
                     /locus_tag="VIT19_08380"
                     /inference="COORDINATES: protein motif:HMM:NF012305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839037.1"
                     /translation="AGNVESAQIVEDRMTGRSRGFGFVEMTTAEEAAAAIDQFNGKDF
                     NGRNLTVNEARPRTDRGGGGYGGGGGYGGGGGGYGGGGGGYGGGGGGGGRRDKGDRDR
                     RPSGNDREPRW"
     gene            complement(489..2489)
                     /locus_tag="VIT19_08385"
     CDS             complement(489..2489)
                     /locus_tag="VIT19_08385"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY5839038.1"
                     /translation="MITKVRPLQSFILALALTASVFAQQPAQPNVDRLRKDVTHLASD
                     MLDGRRTGTQGANDAAHYIASEFSRLGLRPGMQVAKPGRTRGETRARYLQPFPYVSKV
                     ELGKGNILTLNGHPIDGLATNLGEDWMPLGFSSNASIVTSQIVFAGYGISSSELKYDD
                     YSAGNAKDAVAIVFAGTPDGENPHGQFVQAGQIRFKVAAARAAGARALLIISKEELLK
                     DDRMSRLSYDNSGEAGIPVAVISRKLATSLLGNLSDYEKGADVRTLDTNLRTRDATSP
                     EADALVKRMAMRIPPGGVSISLRTEVIRRESPSHNVVGILSGSDPKLKDEAIVIGAHY
                     DHLGRGGQGSLAQSEGEIHHGADDNASGTAGLLELARILSTQKPKPRRTIVFIAFSGE
                     EEGLIGSNYYVNHPVVPVANTVAMINLDMVGRLNDKKLTIGGVGTAQEWRSMLEAENL
                     LHSTTVSLNAPAIEPGPSAANLPIVVGANGRPVVTQDRSKQFAITLNEDGFGPSDHSS
                     FYAKQIPVLFFWTGTHADYHKPSDTAEKINYEGLTRITSFVANIVRDIDKSDKRPTYK
                     VAQVQSTARSTGFRVYLGTIPNYADSSDGMLLDGVRDGSPAAKAGLKAGDKIVKMAGK
                     DVKNVYDYTYALGEMKGGEEYEVEIVRVGQRMTLKLTPEKRQ"
BASE COUNT          505 a          722 c          745 g          601 t
ORIGIN      
        1 ggcgggtaac gttgaatcgg ctcaaatcgt agaagatcgc atgacgggtc gctcgcgagg
       61 tttcggcttt gtcgagatga cgaccgcgga agaagcggct gcagccattg accagttcaa
      121 cggcaaggac ttcaacggcc gtaatttgac ggttaacgaa gctcgccccc gaactgatcg
      181 cggcggtggg ggctacggtg gcggcggcgg ctacggtggt ggtggcggcg gctacggtgg
      241 cggaggaggc ggttacggtg gcggaggagg tggcggtggc cgaagggaca aaggggatcg
      301 cgatcgccgt cccagcggaa atgaccgcga acccaggtgg tgagcgggca gtagcccgac
      361 cgtgagggag ggcgtacttt ctcgcaattg acctggttcc taaaatcaaa aggcaaaggt
      421 gagtaggcgc tgaagcgtcc tcaacctttg ccttttttgt tttctgccta ctgccgtctg
      481 cttactgcct actgtctttt ctccggcgtt aacttcagcg tcatccgctg acccacgcga
      541 acaatttcca cttcgtattc ttctccgcct ttcatctcgc cgagcgcgta cgtgtaatcg
      601 taaacgttct ttacgtcctt gcccgccatc ttgacgatct tgtcgccggc tttgagaccc
      661 gctttcgccg cgggcgaacc atcgcggacg ccgtcgagca acattccatc actcgagtca
      721 gcgtagttcg gaatggtccc tagatagaca cgaaatccag tcgagcgtgc ggtcgattgc
      781 acttgcgcga ctttgtacgt aggtcgtttg tcactcttgt cgatgtcacg cacgatgttc
      841 gcgacgaatg aagtgatgcg cgtcaggcct tcatagttga tcttctcagc cgtgtccgaa
      901 ggcttgtgat aatcggcgtg cgtgccagtc cagaagaaca acaccgggat ctgtttcgcg
      961 tagaacgaag aatggtcact gggaccgaag ccgtcttcgt tgagtgttat cgcaaactgt
     1021 ttcgacctat cctgtgtcac cacagggcgg ccgtttgcac ccactacgat gggaaggttg
     1081 gcggcggaag gtccgggttc aatggccggc gcattaagtg aaaccgtcgt gctgtgaagc
     1141 aggttttcgg cctcgagcat cgatcgccat tcctgagccg tgcctacgcc accaatcgtc
     1201 agctttttgt cattgagtcg cccaaccatg tcgagattga tcatcgccac ggtgttcgcc
     1261 acaggtacaa ccggatgatt gacgtaatag ttcgatccga tcaggccttc ctcttcgccg
     1321 ctgaaagcga tgaagacaat tgtgcgccgc ggctttggct tctgcgttga caatattctc
     1381 gccagctcca gcagtcctgc cgtgcccgac gcgttatcat cagcgccatg atgaatctca
     1441 ccttcacttt gagccagact gccttgaccg ccgcgcccga gatgatcgta gtgcgcaccg
     1501 atcacgatcg cttcatcttt caacttcgga tcgctgccgg aaaggatgcc aaccacgttg
     1561 tgtgaaggcg attcgcggcg gatgacttcg gttctgagac ttatcgagac gccgccgggc
     1621 gggatgcgca tggccattcg cttcacaagt gcgtcggctt caggcgaggt ggcatccctg
     1681 gtgcgcaggt tcgtgtccag cgtacgcaca tctgcgccct tctcgtaatc tgacaagttg
     1741 ccgagaagcg aagtggctaa ttttctcgag atgaccgcca ccggaatccc ggcttctccg
     1801 gagttgtcat acgaaagccg tgacatccga tcgtctttaa gaagttcttc ttttgagatg
     1861 atgagcaatg cccgcgcgcc cgcggctcgc gcagcggcaa ccttaaaccg aatctggccg
     1921 gcctggacga actggccatg cggattttct ccgtcgggcg tgccggcaaa cacgatcgcc
     1981 acggcgtctt ttgcattccc ggccgaatag tcgtcgtact tcaattccga tgaagagatg
     2041 ccgtagcctg caaacactat ttgcgaagtt acgattgacg catttgagga aaagcccagg
     2101 ggcatccagt cttcgcctaa atttgtggca aggccatcaa taggatgtcc gttcagcgtg
     2161 agaatgtttc ccttccctag ctcaactttc gatacatacg gaaacggttg caggtaacgc
     2221 gcgcgggtct cgccgcgcgt gcgccccggc ttcgcgacct gcattcccgg tcgcaaaccc
     2281 aacctgctga attcactcgc gatgtaatgc gccgcgtcgt tcgcgccctg cgttcccgtg
     2341 cgccggccgt cgagcatgtc agaagcgaga tgcgtcacgt ccttccgtag ccgatcgaca
     2401 ttcggctgcg ctggttgttg cgcaaagacg ctcgcggtca gcgcgagcgc gagaataaaa
     2461 ctctgaaggg gtctgacttt ggtaatcatg atttacttcc taaatttgac agcgaaaatc
     2521 gcgtgggcgg gctttgcctt tgcggaattt gattggtttg acctggcggg ttg
//
LOCUS       DATDBY010000449         4027 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2056523, whole genome shotgun sequence.
ACCESSION   DATDBY010000449 DATDBY010000000
VERSION     DATDBY010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4027
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2056523"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VIT19_08390"
     CDS             complement(<1..255)
                     /locus_tag="VIT19_08390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839039.1"
                     /translation="MKNKELDNMLDKVATEIRGEQIDSATVRESADRVWMKMSAEADA
                     GRMPANRLQDAGVPVGAAEHIESCADFQSLMPAYVGRELSE"
     gene            complement(361..996)
                     /locus_tag="VIT19_08395"
     CDS             complement(361..996)
                     /locus_tag="VIT19_08395"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5839040.1"
                     /translation="MKPLKVVTPSVDYAENAILGNRIKTPGPTAMHTMSAEANSSLET
                     LFQQHHDRVFRTAHRVTGSAADAEDVLQTVFLRLARGSEAVTVPDNPESYFARAAVNA
                     SLDLLRARKRSKAVAFDDVENGAAAIELVSRRHPEASHEDRELRHLIREAVSKLGPTA
                     GQMFALRYFEGYDNGEIAQMMKTSALVVGVTLHRARTRLRKEIGSYLQKHK"
     gene            1154..2107
                     /locus_tag="VIT19_08400"
     CDS             1154..2107
                     /locus_tag="VIT19_08400"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HEY5839041.1"
                     /translation="MTFIINALASALPALALQDSVTFIGRIWRYLNEPYRIGSVEVSV
                     TRLIQGVLILAVALVLSRTLSRLLKRSIERRAYLDPGIRYTLGRITQYLIVTVGALLA
                     LKAAFNLDLTSLAVIFTALSVGIGFGLQYIAADIASGFILLFERPVRVGDHVTIVDDE
                     GDVQSINLRTTVVVTNDRVSIIVPNSRLVSQRLINWSYGDPRVRIEIPVGVAYSSDVA
                     LVTGTLLQAADHVDNVLTDPPPKVQFLKFGDYSLDFRLLVWTNRPRLHPQIRSDVNYR
                     IEKLFRETGIEIPFPQTELRVREGALPLDTADKLVPDKLAD"
     gene            2259..2918
                     /locus_tag="VIT19_08405"
     CDS             2259..2918
                     /locus_tag="VIT19_08405"
                     /inference="COORDINATES: protein motif:HMM:NF019958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY5839042.1"
                     /translation="MASPAKRVTSRNSSTDKRAAILRAATRVFAGNGYFNSKVADIAR
                     AADVADGTVYLYFKSKEEILHSIFDQNMAEAIAAVRKLIKEVSDPREKLRRIASLHLE
                     RLGADRDLAVVFQVELRGSTKFMEEFSAAGFAEYLGLLHDIFEEGQRAGVFRKDLNAT
                     IGAKILFGALDEMATNWIISHRNYKLEPMADVVMDVFLNGVSDGTHASGVQHAGGKRT
                     K"
     gene            2915..>4027
                     /locus_tag="VIT19_08410"
     CDS             2915..>4027
                     /locus_tag="VIT19_08410"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY5839043.1"
                     /translation="MTETAPQSPFSPQRVPLTSDEPTTLPEVYERLARDHSKPNTLNY
                     KRDGRWHSISAANMLQRAQHIALGLYSLGIGKGERVALLSESCAEWVLTDQGCLFAGA
                     ITVPIYPTLTPPQAQYILKDSGARVLFVQSREKLAQMEDVLRDSPDVSHVVLFEENAA
                     GRANTWSLSDLENKGRDLDQQQPSLIEEFARGAKPEDLATIIYTSGTTGEPKGVMLSH
                     ANMVSNLIDSSNHFEFGEADTALSVLPLSHVFERQAMNMYLHHGMSVYFGQLDNLGDY
                     LREVHPTVFVGVPRIYEKIVARVQDKAASKGKLNGAMAEWAIRVGREWAQHNSDRKPI
                     PFALSLKHKLADAVLFKKLRNAMGGRIRILVSGGAAL"
BASE COUNT          861 a         1185 c         1074 g          907 t
ORIGIN      
        1 ttctgacaac tcgcggccca catacgcggg catcagcgat tgaaaatcgg cacagctttc
       61 gatgtgctca gcggcgccga ctggaacgcc tgcatcttgc aggcggttcg cgggcatcct
      121 gcccgcatca gcctcagccg acatcttcat ccacacacgg tcagccgatt cgcgcaccgt
      181 cgccgagtca atctgttcgc cacgaatctc agtcgcgacc ttgtccagca tgttgtccag
      241 ttctttgttc ttcataactt ctccttcgcg tcagaacccc gagcgtagcg acgggatcga
      301 atattcaacg ttgactcaat gatccggtcg ctaccgctcc cggttctgac acgcaatcct
      361 tcacttatgc ttctgcaagt aacttccaat ctcttttctt aagcgtgtgc gtgcgcgatg
      421 tagcgtcacg cccacgacca gcgccgaagt tttcatcatc tgcgcaatct cgccgttgtc
      481 gtatccttcg aaataacgca gcgcgaacat ctgtccggcc gttggcccga gtttcgaaac
      541 cgcttcgcga atcaaatgcc gcagctcgcg atcttcgtga ctcgcttcag gatgacgccg
      601 cgacactaat tcgattgccg ccgcgccgtt ttcaacgtcg tcgaaggcaa cggccttcga
      661 acgcttccgc gcgcgtaaca ggtcgagcga cgcattaact gccgctcgcg caaaataact
      721 ttccgggttg tccgggaccg tcacggcttc tgacccgcgt gccaaccgca ggaaaaccgt
      781 ctgcaaaacg tcttcagcat ccgccgcgct gcccgtgacc cggtgggccg tgcgaaacac
      841 gcggtcgtga tgctgctgaa aaagcgtctc gagagaactg ttagcttctg ccgacatggt
      901 atgcattgcc gtgggaccgg gtgtcttgat gcgattcccc aatatggcat tctctgcgta
      961 atcgacggat ggcgttacaa ctttgagcgg tttcacggcg gctaacatat gtgtaaaaaa
     1021 tccccttccg cccataaaac gccgcccgtc cgccgattat taacacccgt acgaataaaa
     1081 ccgacgaaaa agttgcattt gcggcagtta cggccacttt gacgctcccg gccgcggttc
     1141 ttatagttac tccgtgacct tcattatcaa cgctttggcg tcggcccttc cggcgcttgc
     1201 gcttcaggac agcgttactt tcatcgggcg gatttggcgg tatctcaatg agccgtaccg
     1261 gattggcagc gtcgaagttt cagttaccag attaattcag ggtgtcctga tccttgctgt
     1321 tgcactcgtc ctgtctcgca ctctcagccg tttgcttaag cggagcattg aaaggagggc
     1381 ctacctcgat ccgggtatcc gttacacgct gggaagaatc acccaatacc taatagtcac
     1441 agtcggcgcg ttgctcgcgc tgaaagccgc gttcaatctg gaccttacct cgcttgcagt
     1501 catcttcacc gcgctgtcag ttggcattgg cttcggtctg caatacatcg ccgccgatat
     1561 tgcatccgga tttatcttgc tcttcgaacg tccagttagg gtcggtgatc acgtcacgat
     1621 cgtcgacgat gaaggcgatg ttcaaagcat taatcttcgc acgactgtag tagttaccaa
     1681 cgaccgggtc tcgatcattg tcccgaattc gcgccttgtc agccagcgcc tgatcaattg
     1741 gtcgtatggc gatccgcgcg tgcgcattga aattccggtc ggcgtagcct acagctcaga
     1801 tgtcgccctg gtaactggaa ctctgctgca agcagccgac catgtcgata atgtcttgac
     1861 cgatccgcca ccgaaagttc aattcctcaa gttcggagac tactcactag atttccgtct
     1921 gctggtttgg accaatcgtc cgcgcctgca tccacaaatt cgcagcgacg ttaactatcg
     1981 aatcgaaaag ctgttccgcg aaaccggcat cgagattccc tttccgcaga cagagttgcg
     2041 tgtgcgtgaa ggcgcgttgc ctctcgatac cgccgacaaa ctcgttcctg acaaattggc
     2101 agattgaggt aacggtacgc acgcgtctcg cgtgctctct ttgacagtgc cagcaaacga
     2161 agcacgccgg aggcgtgcgt accctcatac ccacgcttgc ccgaacttcc tcgacaagtt
     2221 acgctggttg cgtcactgag tgacgattca ttcattccat ggccagtccc gctaagcgag
     2281 tcacttcgcg caactcgagc accgacaaac gcgccgctat tttgcgcgcg gccacgcgag
     2341 tcttcgcggg taacggctat ttcaattcca aagtcgccga catcgcacgg gccgccgacg
     2401 tcgcggatgg cacggtttat ctctatttca aaagcaaaga agagatcctg cactcgattt
     2461 tcgatcagaa catggcggaa gcgatcgccg ccgtgcgcaa actgatcaag gaagtcagcg
     2521 acccgcgtga gaaactcaga cggatcgctt ccctgcacct ggagaggctc ggtgcagatc
     2581 gcgatctcgc cgtggtgttt caggtggagc tgcgcggctc gacgaaattc atggaagaat
     2641 tttccgccgc cggctttgct gagtacctgg gcttactgca cgacattttt gaagaaggtc
     2701 agcgcgccgg agtgtttcgc aaggacctga acgcgaccat cggcgcaaag attctgttcg
     2761 gggcacttga tgagatggcc accaactgga ttatctcgca ccggaactac aaacttgagc
     2821 cgatggccga tgtggtgatg gatgtttttc taaacggagt aagtgacggt acgcacgcct
     2881 ctggcgtgca gcatgccgga ggcaagcgga ccaaatgacg gaaacagccc cccaatcacc
     2941 cttcagtccg cagcgcgtgc ccctcacgtc tgacgaaccg acgacccttc ccgaagttta
     3001 cgagcgcctg gcgcgcgacc attcgaaacc gaacacgctg aactacaaac gcgacggcag
     3061 gtggcattcg atctcggccg cgaacatgct tcagcgcgcg cagcacatcg cgcttggtct
     3121 ctattccctg ggcatcggca aaggcgaacg tgttgcgctg ctttccgaaa gctgcgccga
     3181 atgggttttg accgatcagg gctgtctgtt cgcgggcgct atcacggtcc caatttatcc
     3241 gacgctgacg ccgccacagg cacaatacat tttgaaggac tcaggcgcgc gagttttgtt
     3301 tgttcagtcg cgagaaaaat tggcgcaaat ggaagacgtc ttgcgtgatt ctcccgacgt
     3361 ttcgcatgtc gtgctgttcg aagagaacgc cgccggccgc gccaatacgt ggagcctctc
     3421 agatctcgaa aataaaggca gagatttgga tcagcagcag ccttcgctga tcgaagaatt
     3481 cgcgcgcggg gcgaagcccg aagatctggc gacgatcatt tacacctcgg gaacgacggg
     3541 cgagccaaag ggcgtaatgc tttcgcacgc gaacatggtt tcgaatctga tcgattcgtc
     3601 gaatcacttc gagttcggcg aggcagatac tgcgctttct gttctgcctt tgtcgcacgt
     3661 cttcgaacgc caggcgatga acatgtacct gcaccacggc atgagtgtgt atttcggcca
     3721 actcgacaac ctgggcgact atctgcgcga agttcatccg acagtatttg tcggcgtgcc
     3781 gcgcatttac gaaaagattg tcgcgcgagt gcaggacaaa gcagcttcga aaggaaagtt
     3841 gaacggcgcc atggcggaat gggcgatccg agtgggccga gaatgggcac agcacaattc
     3901 ggatcgcaag ccaattccgt ttgcgctttc gttgaaacac aagctcgccg acgcggtgtt
     3961 attcaaaaag ctccgcaacg cgatgggcgg acgaattcgc atcctggttt ccggcggcgc
     4021 ggcgctg
//
LOCUS       DATDBY010000450         2977 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_462637, whole genome shotgun sequence.
ACCESSION   DATDBY010000450 DATDBY010000000
VERSION     DATDBY010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2977
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462637"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            276..1022
                     /locus_tag="VIT19_08415"
     CDS             276..1022
                     /locus_tag="VIT19_08415"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEY5839044.1"
                     /translation="MPNSLNSIAVNSSNLRILLWDLDGTLVRGKRYGTFKDYTIPMLK
                     SVFGTSGSLGEMMVSGMTDLQIVEEALRCEGITREQISAKKDELKRSYMEQMKLAVGN
                     GAHIIEAMPGALEALQAVQDHPRYQSAMLTGNIEPAAYLKVEITGLAEFFTLPGAFGD
                     ESFDRRDLPALAVQRINEELGANLAAEQFIVIGDTPNDVACARHFGTRVVGVGTGRIH
                     SFEELRACKPDALLPDLLDVDLFIRTLDGL"
     gene            complement(1309..1584)
                     /locus_tag="VIT19_08420"
     CDS             complement(1309..1584)
                     /locus_tag="VIT19_08420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839045.1"
                     /translation="MHERHPRNAHLQTSAKPLLRQIAFDAVAFDAFRIQDQNRRRPNR
                     VEAFEVRGMFLDVSFEWDEVLVDEVGGTFVGIGLGFQPSTGASSRRG"
     gene            1579..1794
                     /locus_tag="VIT19_08425"
     CDS             1579..1794
                     /locus_tag="VIT19_08425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839046.1"
                     /translation="MHKKFADAQQLYAEVVNRFGDLAVGAEALYWRAVSQYKATNDHT
                     ALGEVAPELADKFPEDEWRLKSLPWAH"
     gene            complement(1873..>2977)
                     /locus_tag="VIT19_08430"
     CDS             complement(1873..>2977)
                     /locus_tag="VIT19_08430"
                     /inference="COORDINATES: protein motif:HMM:NF020260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839047.1"
                     /translation="LEEVDVNVHPAKTEVRFRRAAAVADSVRAAVRAALASAGYAPAA
                     ETQTAAEFRRDEVGADADENRITPTDVAETEVTSRVEPLARSTFALRPEPQQERIGFG
                     FATAVQAQLSAEEIAASPETGLSEPLPADPMPVAKAISDEPVEPEVAPALRPAPSLPP
                     LDSATKFVGEVRDSLSQNIRPLGQLDESFIIATDDEGLLLIDQHVAHERVLFDKYRAL
                     ETARLAESQRMLIPETFDLTPAQAAAFDTIAEELESYGFELMRLSGRTVAIKATPADL
                     PASEARNVLSEVLDSIDQEKRGKSREVLRDEIAASLACHSAIKVNMPLAPEKMRWLID
                     RLLLTSSPTTCPHGRPVILRLTTQDILKGFHRI"
BASE COUNT          646 a          831 c          864 g          636 t
ORIGIN      
        1 tgtcgtcgaa gccatgaaaa tgcagaacga gatgaaagcg ccgaaagcgg gaactgtcgt
       61 gacgctgaac gtcgaagtag gaacgacggt caatggcggc gatgtgctgg ccgtgattga
      121 gtaactcttc tggggcatga aagggaagac tatttaacat ttgggatttg agatttggca
      181 tctggtaatt tgcttcgcat ggtttactga tagccgatgt ccttgcttat caaatcgcaa
      241 ataacaaatg tcagatctca gatctcaaat ctcaaatgcc aaatagtttg aactcgatcg
      301 ccgtgaattc ttcgaacctc agaatactgc tctgggatct cgacggcacg cttgtccgcg
      361 gcaagcgtta cggcactttc aaggactaca cgatcccgat gctcaaatcg gtcttcggca
      421 cttcgggttc gctcggcgag atgatggtgt ccggaatgac ggatttgcag atagtcgaag
      481 aagcgctgcg ctgcgaaggc atcacgcgtg aacagatcag tgcgaagaag gacgagctga
      541 agcgctctta catggagcag atgaagctcg ccgttggcaa cggtgcgcac attatcgaag
      601 ccatgcccgg cgcgctcgaa gcgctgcagg ctgtgcagga tcatccgcga taccagtcgg
      661 cgatgttgac cggcaatatc gagccggccg catatttaaa agttgagatt accggcctcg
      721 ctgaattctt tacgctgccg ggcgcgttcg gcgacgaatc gtttgaccgc cgcgatctgc
      781 ccgcgctggc ggtgcaaaga attaatgagg agctgggagc gaatctcgcc gccgaacaat
      841 tcatcgtcat cggcgacacg ccgaacgatg ttgcgtgcgc ccgtcacttc ggcacgcgcg
      901 tcgtcggggt ggggaccggc cgcatacatt cctttgaaga acttcgcgcg tgcaaacccg
      961 atgccttact tccggatctc ctggacgtgg accttttcat ccgcacactc gacggtttgt
     1021 agggagatcg agcgctttcc tcggtgtctc cgtggaactt tgtgactctg tggtgaaatg
     1081 atggtgcgca ggcattcccc acagagacac cgagaactca cagagacacg gagctattag
     1141 tacgcggcgt ctttccttca ccgctggtcg gcgcgataat caattcattc cctgacaggt
     1201 tggaatttca gactggagga cggaactatg ctcgtcaatt ggatcaaaga cgctgatgcc
     1261 gcgcttgagc aagcgaaaac tgagaacaag ctggtgctta tcgatttctc agccgcgccg
     1321 gcttgaggcg cctgtgctcg gctggaagcc gagtcctatt ccgacgaagg taccgccgac
     1381 ttcatcaacc agaacttcgt cccactcgaa gctcacatca aggaacatcc cgcgtacttc
     1441 aaacgcttcg acgcggtttg gacgccgacg attctgatcc tggattcgaa aggcgtcgaa
     1501 cgctaccgca tcgaaggcta tctgccgaag gagtggtttc gcgctcgtct ggagatgggc
     1561 attgcgcggg tggcgttcat gcataagaag ttcgccgacg cgcagcagct gtatgcggaa
     1621 gttgtaaatc gtttcggcga tctcgccgtg ggggcggaag ctttgtattg gcgcgccgtc
     1681 tcgcaataca aagctacgaa tgatcacacc gcgttgggcg aggtcgcgcc agaattagcc
     1741 gacaagtttc cggaagatga gtggcgactg aagagcctgc cctgggcgca ttgaagcaga
     1801 aacccgacca tcagggaggg tgcaacgcaa tcatgacgct gcaccctccc ttacggtcgg
     1861 gtctctgcaa cattaaatcc ggtgaaagcc cttcagaata tcctgcgtcg ttagccgcag
     1921 gatcaccggc cggccatgcg gacaggtcgt cggcgaagag gtaagcagga gtcgatcgat
     1981 taaccagcgc atcttttccg gcgcgagcgg catgttgacc ttgattgccg agtgacacgc
     2041 gagcgacgca gcgatttcat cgcgcagcac ctcgcgggat ttcccacgct tctcctgatc
     2101 gatgctgtcg agcacttccg acaaaacgtt gcgcgcttcg ctcgcgggca aatcagccgg
     2161 cgtcgctttg atggcgacgg ttcggcctga caacctcatc agctcaaaac cataactctc
     2221 caactcttcc gcgattgtgt cgaaagccgc ggcttgcgcc ggtgttagat cgaacgtttc
     2281 cggaatcagc attcgttgag actcagccag ccgcgcagtt tccaacgcgc ggtacttatc
     2341 aaacaaaacg cgttcatgcg cgacgtgctg atcgattagg agcagacctt cgtcgtccgt
     2401 cgcgatgata aaactctcat cgagttgacc aagcggccga atgttttgtg acagcgagtc
     2461 cctgacttcg ccgacgaact ttgtcgccga atcgagcggc ggcagggaag gcgcaggtcg
     2521 aagggccggc gcaacttcgg gttcaactgg ttcatcggaa atcgctttcg ccaccggcat
     2581 cgggtccgcc ggcaagggtt ctgagaggcc ggtttccggt gaagccgcaa tctcttcagc
     2641 cgacaactgc gcttgcactg cggtagcaaa gccaaatccg atgcgctcct gctgcggctc
     2701 gggacgtaaa gcgaaagttg agcgcgcgag cggttcgacg cgtgatgtaa cttccgtttc
     2761 cgccacgtcc gtgggcgtga ttcggttctc gtccgcatcc gcgccgactt catctcgtcg
     2821 aaattccgcg gccgtttgcg tctcagcagc gggcgcatat cccgcgctcg ccaacgccgc
     2881 gcgcacggct gcgcgaacgg aatcggccac cgcggccgca cgtcgaaaac gaacttcggt
     2941 tttggcggga tgaacgttga cgtcaacttc ttcgagc
//
LOCUS       DATDBY010000451         2545 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1725881, whole genome shotgun sequence.
ACCESSION   DATDBY010000451 DATDBY010000000
VERSION     DATDBY010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1725881"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            357..680
                     /locus_tag="VIT19_08435"
     CDS             357..680
                     /locus_tag="VIT19_08435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839048.1"
                     /translation="MTTKLFAGLALCVLIAACEPATDVTKPTASPATQSTATPAPSPS
                     VEAPAPASAVAGWKAGDKVKVTINGAAVEATVVSIDEKALKATVKVQGETKERTVNLS
                     DIVKQ"
     gene            835..1440
                     /locus_tag="VIT19_08440"
     CDS             835..1440
                     /locus_tag="VIT19_08440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839049.1"
                     /translation="MLEPADFDRLLTWLDPDPDRAGQLYESIRWRLIAILASRGCHIP
                     EELADDVIDRVARRVKDIEATYTGDKAIYFLGVMNNVHHEYLRRPPVPRLVADGNEQV
                     EVKEQTHVCLDRCLEKLAPHAREIIGQYYAADKSAKISLRKRVAAKFNVSGSNLRLRA
                     LRIRAKLQTCIEQCMEVAETRPRGPQADSPLGVGRSGSVRL"
     gene            1437..2315
                     /locus_tag="VIT19_08445"
     CDS             1437..2315
                     /locus_tag="VIT19_08445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839050.1"
                     /translation="MNQPTANISEATIRRFLLAQLSRGEQSAFERALLMNPQLEQRAR
                     LAEIALIDDYVLSRLKANDRDAFQIEFLVTTARRRKLEVSNALRQTFAVANVSQPAPS
                     SGAQGLFVWPTFAWRIAFAIVVLMVLFASALVIRREPQIVKRIIPKRLRPSAVVAPTP
                     AAAHHPANSGESPDHRDETPQLPAHEASPQKMVLLASSLPDNAPIVSLANNTSNAVRL
                     ELMLERNESATFNAVVTTSDGEVVYDVREISAQDRDRLDFDVPIERLKPGVFQISLTQ
                     RGGESGVVRTYYFRAH"
BASE COUNT          594 a          697 c          726 g          528 t
ORIGIN      
        1 tgcttctcaa ctcgctttgt cgcttccaat caaaacgacc ggcggctcag tcaaagccaa
       61 cgtcaaggac gtgcgatccg aagtccagga aggttcgctg cgaatcgtga tgacttatga
      121 tttcagcgcc gagaagaaca ctggataacc tgactggagc gcaaccgtcc aggttgctca
      181 ttctttgaag acacagcaag cgaggacgct tgcgctccag tcgcgccaaa aaaaattctc
      241 cttttacacc tgaaacgttt cgcctgccaa cgtcattcac ccgcgaattc agaatccggc
      301 cgcagaaacc aacttgaccg gacagctgaa tagttcatca aacgggagct aacaacatga
      361 caacgaaact ttttgcaggt ctggctttgt gtgttctgat cgcggcgtgc gaaccggcca
      421 cggacgttac gaaacccacg gcaagtccag ctacgcaatc gaccgcgaca cctgcgccga
      481 gtccttcggt ggaagcgccg gcgccggctt cagcggtcgc tggatggaaa gcaggcgata
      541 aagtgaaagt cacgatcaac ggcgcggcag ttgaagcaac tgtcgtttca atcgacgaaa
      601 aggcgctcaa ggcaacggtc aaggtgcagg gcgaaacgaa agagcgaacc gtgaacctgt
      661 cggacatcgt aaagcaatag gaagatttgg agtgcgccgg caacgacggc gctttggatt
      721 atcggcttta attcagtacg tatgcttctt ccgagccgat ccaaagcgcc gtcgccgctg
      781 cgctctgccg gcgcactcca aagagtagca atgtcaccca tgaggcaact caaggtgttg
      841 gaaccagccg atttcgaccg gctcctgaca tggctcgatc cggatccgga tcgagctggt
      901 cagctttacg aaagcattcg ctggcgtctc atcgcgattc tggcgtcgcg tggatgtcac
      961 attcccgaag agttggccga cgatgtcatc gaccgtgtcg cccggcgcgt gaaggacatc
     1021 gaagcgacct acaccggtga caaggcaatc tattttctcg gcgtgatgaa taacgtgcat
     1081 cacgaatatc taagacgtcc gccggtcccc aggctggtcg cggacgggaa cgagcaggtt
     1141 gaagttaaag agcagacaca cgtttgtctc gatcggtgtc tggagaagtt ggcgccacac
     1201 gcgcgcgaga tcattgggca gtactacgcg gctgacaaaa gcgcgaagat tagtctgcgc
     1261 aaacgagtcg cggcgaaatt taacgtgagc ggcagtaatc tccgtcttcg cgcgctgcgc
     1321 atccgggcaa agctacaaac gtgcatcgag caatgcatgg aagtggccga gacccgaccc
     1381 cggggtcccc aagcggacag cccgcttggg gtgggacggt cagggagcgt gcggttatga
     1441 atcagccaac tgcaaatatt tccgaggcca ctattcgccg gttccttctc gcgcaacttt
     1501 ctcgagggga gcagtcggca ttcgagcggg cgctgttaat gaatcctcaa ctcgagcaac
     1561 gcgcgcggct cgccgaaatc gcgttgattg acgactatgt tttgagccgc ttgaaagcga
     1621 acgatcgcga cgcttttcaa atagagtttc tggtaacgac ggcccgtcgc cgaaagctcg
     1681 aagtatccaa tgccttgcga caaacttttg cggttgcgaa cgtatcgcag cccgcacctt
     1741 catcaggcgc tcaaggtctt ttcgtctggc cgacctttgc gtggagaatc gcgtttgcga
     1801 tcgtcgtgtt gatggttctc tttgccagcg cactggtaat tcgcagggaa ccccaaatcg
     1861 tcaagcgaat cattcccaag cgtctgcggc cgtccgcggt cgtcgcgcca actccggcag
     1921 cggcccacca tccagcgaat tcaggcgaat caccggacca ccgtgatgag acacctcagt
     1981 tgccggcgca cgaagcttcg ccgcagaaga tggtcttgct ggcaagctct ctgcccgaca
     2041 acgcgccgat cgtcagtctg gcgaataaca cgtcgaacgc tgtgcgactt gaactgatgc
     2101 ttgagagaaa tgagtccgcg acgtttaatg cggtcgtgac gaccagcgac ggcgaggttg
     2161 tgtatgacgt gcgggaaatc agcgcgcaag acagagaccg tctggatttt gatgtgccga
     2221 ttgagcggct gaagccgggc gtttttcaga tctcactcac tcaacgcgga ggcgagtcag
     2281 gtgtggtgag aacttattac tttcgagcac attaacggaa tgactggagc gcaagcgtcc
     2341 cgcttgcatt ggcgtttgat cagaaggggc aagcgagacc cttgcgctcc aatcaatgaa
     2401 ccgactattt cacgcgactc tttcgtcgtc gcagaaagtc gattagaacg aactgcgaaa
     2461 ggtttgaggg attggcgaag taggctttgc cgttcgtcat cgctgtcatt tctttgacga
     2521 attcgaccag gtagtaatcg ctggc
//
LOCUS       DATDBY010000452         5203 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1854848, whole genome shotgun sequence.
ACCESSION   DATDBY010000452 DATDBY010000000
VERSION     DATDBY010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5203
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1854848"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2024
                     /locus_tag="VIT19_08450"
     CDS             <1..2024
                     /locus_tag="VIT19_08450"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HEY5839051.1"
                     /translation="DAVVRVGFGSGYGTGEFVSAEGLVLTNHHVAFDGLVSASDNAKD
                     YGMMGYVAKNRSEELPLTGYTITMTQDLKDVTADVLTGVSDATPPAERAASIQSKSSA
                     LETANSKPADGISARVMAMNEGLTYYLFVTQVLRDVRVVYAPPKNIGFFGGDPDNFEW
                     PRHVGDFTFLRAYAAPDGKPSDYASSNVPYKPKKFLSLSMGGVKDNEFVMVMGYPGST
                     RRYRESYSVAYNQDVFIPFSVEMQQKQIEVLTIMGRANPSMRVKLQSVIFGISNELKN
                     NDGSVLAMRRAGIVDQKRVQEAAFTKWISENPERQKKYGEVLPSLAKAYEELEKTQPR
                     DRIVQEIASLSDVFEIAGFISTFAANKEKPEAERNPNLALIAARARAALPEILAGRNP
                     TLEREMLNFFLRKAAELPASQKIEAIEKQFGSLKDEARIRAEEDFARAIVDSKNLSTP
                     EAFAALFDRTPAQLKELNEPLLDFAAEIATLFAETQPRTRNFNAIVARWRPLLIHGMT
                     EMRGGKPYPDANATLRFTYGDVKGYIPKDAAIYQPFTHLSGVVEKDTGSEPFDVPAKL
                     KQLFRARDFGIYAEGQDVPVNFISTTDIIGGNSGSPILNGRGEQIGIVFDGNYEGLGN
                     DFFYDAPKNRTISVDIRYVLFLTEKFGGAGYLLKEMDIKNAPAALKKAA"
     gene            2134..2658
                     /locus_tag="VIT19_08455"
     CDS             2134..2658
                     /locus_tag="VIT19_08455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839052.1"
                     /translation="MKKLTIILGLALLGSTLSPVMSARTSGRSEPVAAQEQGVFTHQE
                     AGVRFQLPKGWKAKPDGEVITASSADDALQVVFWIPDEANFEAAVKELGTELGKTIKN
                     MKTVGKPSEDVLNDMPHYGETGTGDVDGTTIVWSVDVLGAKKPLIILTFAAPSLFEKH
                     SSAYEQLLNSIKKI"
     gene            3073..3279
                     /locus_tag="VIT19_08460"
     CDS             3073..3279
                     /locus_tag="VIT19_08460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HEY5839053.1"
                     /translation="MSRITGKVKWFNNSKGYGFIEQPGSSDIFVHYSAIQGDGFKTLE
                     EGQEVEFEVTQGPKGPQAEKVTKA"
     gene            complement(3453..4169)
                     /locus_tag="VIT19_08465"
     CDS             complement(3453..4169)
                     /locus_tag="VIT19_08465"
                     /inference="COORDINATES: protein motif:HMM:NF041621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MXAN_5187 C-terminal domain-containing protein"
                     /protein_id="HEY5839054.1"
                     /translation="MLLLTPTLELSSATPLAPRIKGDFQLAINNNKLARLEADRRGRS
                     KNVLVEHVSVEDRLARLEEDIRRLKVEYDIYFSGGSKRPPYDTKLRVETQLKRLADDR
                     SLTFALRFHYNSLATRYNAFREVWRRTMKGREEGRDAFTVQRAEREAKEKKTPFKAST
                     FACTDVRHDVQTIKGVYDALMVAKRACGEASQDLSFAKFHRLVVERTQAMKEKIGTDR
                     VVFSVDVEGGHVSFKAKADT"
     gene            4244..>5203
                     /gene="selA"
                     /locus_tag="VIT19_08470"
     CDS             4244..>5203
                     /gene="selA"
                     /locus_tag="VIT19_08470"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HEY5839055.1"
                     /translation="MPKSAAKPSNKTALLRALPSVDALLRTEIGQSVRTSAGAEQQTN
                     LARVVIEKLRAEILAGTFSLNDGDASSALAAEAEQRLAILNKQQAARGVRRVINATGV
                     ILHTNLGRAPLSDAARRAVAAASAYCNLEFDLNSGNRGRRGERAEDLLATLTGTEAAL
                     VVNNCAAAALLVLTVLARAGETIVSRGELVEIGGDFRVPEVMAQSGTRMVEVGTTNRT
                     KLADYQKALTADTRLIMRVHTSNYRIVGFTQTPTLKELATLAHENGLLLYEDAGSGAL
                     IDFSQFGITGEPVIRESFTAGVDVISFSGDKLLGGPQAGLLVGR"
BASE COUNT         1157 a         1454 c         1482 g         1110 t
ORIGIN      
        1 aggatgccgt cgtcagagta ggtttcgggt caggctacgg cacgggcgag ttcgtgtcgg
       61 ctgaaggact ggtattgacc aatcaccacg ttgctttcga cgggttggtg tcggcttcag
      121 acaacgcaaa agactacggc atgatgggat acgtggcgaa gaatcgcagc gaagaattgc
      181 cgctgaccgg gtacacgatc acgatgacgc aggacttgaa agatgtgacc gctgatgtgc
      241 tgaccggcgt gagcgatgcg acgccacccg ctgaacgcgc cgcgtcgatt cagtcaaagt
      301 cgagcgcgct cgaaaccgcg aactccaaac cggccgatgg aattagtgca cgcgtgatgg
      361 cgatgaatga agggctgacg tactacctgt tcgtcaccca ggttttacgc gatgtgcgcg
      421 tcgtgtacgc gccgcctaaa aatattggct tctttggcgg cgacccggac aactttgaat
      481 ggccgcgcca cgtcggtgac ttcacttttc tgcgcgctta cgcggccccc gacggcaaac
      541 cttcggacta cgcgtcaagc aacgtccctt acaagccaaa gaagtttctg tcgctttcga
      601 tgggcggcgt caaagacaat gaattcgtga tggtgatggg ctatcccggc tcgacccgcc
      661 gttaccgcga gagctactca gtcgcttaca accaggacgt gttcattccg ttttcggtcg
      721 agatgcagca gaagcaaatc gaagtcctga ccatcatggg ccgagcgaac ccatcgatgc
      781 gggtcaaact tcagtcagtg atcttcggca tctcgaacga gttgaagaat aacgacggct
      841 cagtcctcgc gatgcgccgc gccggaatcg tcgatcagaa gcgcgtacag gaagctgcgt
      901 tcacgaaatg gatcagcgaa aatcctgagc ggcaaaagaa gtacggcgaa gtgctgccgt
      961 cactcgcgaa ggcctacgaa gagttggaga agactcaacc acgcgaccgg atcgttcagg
     1021 agatcgcttc gctcagtgat gtttttgaga tcgccggctt tatcagcacc ttcgccgcga
     1081 ataaagagaa acctgaggct gagcgcaatc cgaacctcgc gctaatcgcg gcacgtgcgc
     1141 gcgcggcgct gccggaaatt ctcgctgggc gcaatccgac gctcgagcgc gagatgctca
     1201 atttcttcct tcgtaaagca gccgagcttc ccgcttcgca aaagatcgaa gcaatcgaaa
     1261 aacagttcgg cagcttgaag gacgaagccc gcattcgcgc ggaggaagat tttgcgcgcg
     1321 cgattgttga cagcaagaat ctttcgacgc cggaagcctt cgcggctctg ttcgatagga
     1381 caccggcgca gttgaaagag ctgaacgagc ccctgctcga tttcgcggcc gagattgcta
     1441 cgctcttcgc cgagacgcag cctcgcacgc gtaacttcaa cgcgatcgtc gcccggtggc
     1501 ggccgttgct aattcacgga atgactgaga tgcgtggggg caagccttat cccgacgcga
     1561 acgcgacgct gcgattcacg tacggcgacg tcaaaggcta catcccgaaa gacgcggcga
     1621 tctatcagcc attcacgcac ctgtcgggcg tcgtcgagaa agacacgggc agcgaacctt
     1681 tcgatgtgcc ggccaagctg aagcagcttt ttcgcgcacg cgactttggt atttacgccg
     1741 aaggccagga cgtgccggtg aatttcatct cgacgacgga catcatcggc ggtaattcag
     1801 gctcgccgat tctgaacggg cgtggtgaac agatcggcat cgtctttgac ggaaactacg
     1861 aaggccttgg caacgacttc ttctacgacg cgccgaagaa tcgcacgatt tccgtggaca
     1921 tccgctacgt actgtttctg actgagaagt tcggcggcgc tggatatctt ttgaaagaga
     1981 tggacatcaa gaacgcgccg gcggctttga agaaagctgc gtgaagtcag aaccacctgc
     2041 ggtagcgggt ggttgttgat tatttccgaa gcaacataat ctccacatca accacccgct
     2101 accgcaggtg gttctgacta aaaggaaaac cccttgaaaa aactaactat cattctaggt
     2161 cttgccctgt tgggctcgac tctgtcgccg gttatgtcgg ccagaaccag cggtcgttcg
     2221 gaacccgtcg ctgcgcaaga gcagggcgtg ttcacccatc aggaggccgg tgttcgattt
     2281 caactcccaa agggttggaa ggcaaagccc gatggtgaag tgattaccgc ttcgtccgct
     2341 gatgacgcgc tccaagtggt gttttggatt ccggatgagg ctaattttga agccgcagtg
     2401 aaagaactgg gcacggaact cggtaagacg attaagaaca tgaagacggt gggcaagccg
     2461 tcggaagacg tcttgaacga catgccgcat tacggcgaga ccggtaccgg tgacgtcgat
     2521 gggaccacca tcgtctggtc ggttgatgtg ctcggcgcga agaagcccct gataattctg
     2581 acatttgccg cgccaagcct ttttgaaaag cactcgtcgg cctatgagca actactgaac
     2641 agcattaaga agatctagcg gaagggccgc tggtccctat ggtctatctc gcgggcctgt
     2701 ccactcgacg acccgcgaga tttttcttct tgacagccca aaacggcttc cgttaggatg
     2761 cgccgacgtt tcaatcagtg ccaggccctt gggatttaca cctgccaagg catttcgatt
     2821 tgcaagcgct aaaagtgaaa tgagttcttg ttttagaagt tgcgcccatg tatcgcgcca
     2881 ccgtgtgcga ttacctgggc gctttttggc tagtgtgttt ccgtgtagcg ccccagacaa
     2941 aagcgcgtcc ggctcacagc attaacctgt tggacggtca accaagcttc agtcctaacg
     3001 actgaagcgc aagcgacagc gcttgctagg cgccgcgcca attttgccga atcgttagga
     3061 ggattcgttt gtatgtctag aataaccggt aaggtcaagt ggtttaacaa ctcgaagggc
     3121 tacggcttca ttgagcagcc aggctcttcg gacatctttg tgcactacag cgccattcag
     3181 ggcgatggct tcaagaccct cgaagaaggt caggaagtcg agttcgaagt gacgcagggc
     3241 cccaaaggac cacaggctga aaaagtcaca aaggcgtaaa tctccccggc ttgcttttca
     3301 agcagccact ggccgcttcc ggtagtcccg gaacgcgcaa gaaaaaaagg cgatctcgga
     3361 tttccgagat cgcctttttg gtttcttctt tccgctctcc caaagggaga gcttcatgaa
     3421 acgtcggtta gtagcccgac tctaaaccgg atttaggtgt cagccttcgc cttaaaactc
     3481 acatggccgc cttcaacgtc aactgagaac actacccggt ctgttccaat cttttctttc
     3541 atcgcctggg tgcgttcgac aaccagccgg tgaaatttcg cgaacgacaa atcctgcgac
     3601 gcttctccgc acgctcgctt cgccaccatc aaagcgtcat acacaccttt gattgtctgc
     3661 acgtcgtgac gcacgtcggt acacgcaaaa gttgaggctt tgaacggcgt ctttttttcc
     3721 ttcgcttctc tttcagcgcg ctgcaccgtg aaagcgtcgc ggccttcttc gcggcccttc
     3781 atcgtgcgcc gccagacctc gcggaaagcg ttgtagcgtg tcgccagcga gttgtagtga
     3841 aagcgtagcg caaaagtcaa agacctgtcg tcggctaagc gcttgagctg tgtttcgacg
     3901 cgcagcttcg tatcgtaagg cggacgcttt gagccgccgc tgaaatagat gtcgtattca
     3961 accttgaggc ggcgaatgtc ttcttccaat cgcgccaacc gatcttcgac cgaaacatgt
     4021 tcgaccagga cgtttttgct tcttccacgg cggtcagcct cgagtctggc cagcttgttg
     4081 ttattgattg ccaactgaaa atctcccttg atgcgcggcg caagcggggt cgccgacgat
     4141 agttcgagtg taggagtcag gagaagcact gtcaatgact tgtttcgtcg cagattgcct
     4201 cttgagccgt cgacgtcata ttctcgttct cgccgaaccc aaaatgccaa aaagcgctgc
     4261 caaaccttcc aacaaaaccg cattgttgcg cgcgctgccg tccgtcgatg cgctgctgcg
     4321 gactgaaatc ggtcagtccg tgaggactag cgccggcgct gaacaacaga ccaatctggc
     4381 gcgggtagtc atcgagaagt tgcgggcaga gattctggcg ggcacgtttt cgttaaacga
     4441 cggcgacgca tcctcggcgc tggccgccga agcggaacaa cgactagcta tcttgaataa
     4501 gcagcaagcg gcgcgcggtg tgcggcgcgt gatcaacgcg acgggcgtaa ttctccacac
     4561 taacctcggg cgagcgccat tgtcggatgc tgcgcggcgg gccgtcgccg ccgcgtcggc
     4621 gtactgcaat ctcgaattcg atctgaactc aggcaatcgc ggacgccgcg gcgagcgcgc
     4681 ggaagattta ctcgcgacgt tgaccggaac cgaagccgcg ctcgtcgtga acaattgcgc
     4741 ggcggcagcg ctgctcgtct taaccgtgct ggcgcgcgcc ggcgaaacga tcgtctcgcg
     4801 gggcgagctg gttgaaatcg gcggagactt tcgcgtgccg gaagtgatgg cgcaatcagg
     4861 tacacgcatg gtcgaagtcg gcaccacaaa tcgaacgaag ctcgcggatt atcagaaggc
     4921 gctcacggcc gacacgcgcc tgatcatgcg cgtccacaca tcgaactatc ggattgtcgg
     4981 cttcacccaa actcccacgc tcaaagaact cgcgacgctg gctcatgaga acggtttgtt
     5041 gctctatgaa gacgccggct caggcgcgct catagacttc agccaatttg gaatcaccgg
     5101 cgaacccgtc attcgcgagt cgtttacggc cggggttgat gtcatctcgt ttagtggcga
     5161 taaattgctc ggcggcccgc aggctggttt gctggtcggt cgc
//
LOCUS       DATDBY010000453         3984 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_220471, whole genome shotgun sequence.
ACCESSION   DATDBY010000453 DATDBY010000000
VERSION     DATDBY010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3984
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220471"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(263..3556)
                     /locus_tag="VIT19_08475"
     CDS             complement(263..3556)
                     /locus_tag="VIT19_08475"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY5839056.1"
                     /translation="MQKLAEICVRRPVFATMLILSLTVVGAFSYSSLGVDLFPKIDLP
                     TITVSVINPGASPQEIETEITDKLEGAVNTISGIDELRSTSVEGVSQVFISFVLEKNA
                     DVAAQEVRNKIELIQNDLPETAETPIVQKLDTDATPVLRIALSAPRSLREVTDIADKQ
                     IKRQIEPISGVGNVQIVGGREREIQVWLDTDKMRAYNVSAAEVANSVRMQNMELPGGR
                     VEEGKREMTVRTMGRVTDAAELNNIVIANRGPYAVKLSDIGYVEDGAEEQRTEARLNG
                     QPAVTLVISKQSGQNTVAVADAVKERLEELKNTLPSDVKVQLVGDQTIFIKASLDAIQ
                     LHLIEGSILAAIVVFVFLWSFRSTLIAAIAIPTSIIATFGLMAAMGFTMNQITMLALT
                     LMVGIVIDDAVVVLENIFRYVEEKGVPPFQAAIDGTKEIGLAVTATTLSLLAVFLPVG
                     FMAGMVGRFMSSFGFTASFAIAVSLLVSFTLTPMLAARMIKRKQRVSIPPSRDSDRVH
                     VSTESGSDRVSDSPEIRKRDYSLAEFKEKYGQAHSKEGRFYRPIDRAYTRMLEWSMAH
                     RWAIVGLSVFVIISTIPLFMFVGKNFLPVDDQSQFEVNVRAPEGSTLSFTSGLAERMA
                     ADLRKLPGVTDTLVTIGGGQQQIVNIANIYIKLTPIGERSVTQNDLMARARDEIVAKY
                     VKEFPDQLRTSVNSVAAISGGGFRNVDVQYVIGGPDLDKLTAYSNGMLAKLKTLPDVV
                     DADSTLISGKPELRVVIDRARAGDLGVRIGDIAQALNTLVAGQKVSTFNAGVDQYNIR
                     VRAMGQYRANAEGLQRMIVASQKLGWVSLDNLVRVEEATGPSSIDRYNRQRQVMLTAN
                     TKPGGSQAAVIGKLEQFAREENMESTYQTSLAGRSKELSRTGYYFLLAIVLSFIFMYM
                     VLAAQFESFIHPVTILLTLPLAIPFGILSLLVTGQTVNIFSGLGLLLLFGVVKKNAIL
                     QIDHTNGLRRQGMERHEAIIQANRDRLRPILMTTIALVAGMLPLTISSGPGSGTNRSI
                     GVLVVGGQSLCLLLTLLAVPVFYSLFDDLARSRIWARIGAGVGGVFGRARKRAATAAA
                     SLIGTFNKQ"
     gene            complement(3646..>3984)
                     /locus_tag="VIT19_08480"
     CDS             complement(3646..>3984)
                     /locus_tag="VIT19_08480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839057.1"
                     /translation="RVSPNVSAASRTLTVEAEVQNPNGELKPGQFATVRILQPQSEPA
                     VLVPQRALRQVSGATYVFVIKNGRAEQRLVQAGQIEGDLVEINSGVAADEIVATTNVD
                     QLSDGARIRQ"
BASE COUNT          855 a         1218 c         1088 g          823 t
ORIGIN      
        1 aagggcgcac gaagtaagcg cggcgtttga tgatcgctga agagcgcgct tacttcgtgc
       61 gcgcttctgc attggcggct tcagcgaaag acgaccgtca cgcccacccg aggctacgcc
      121 tctgatttcg cgaggcgcag cctcgcttga tccaaaatca gccgccgcct gaaaggcaga
      181 gcctttccgc aatgtgctgc ggcaatgccg ccaaaaccag ccattcgata acgccatact
      241 aaactccaga aaaatcttca cgctactgtt tgttaaaagt ccctatcaaa gaagcagcgg
      301 cggtagcagc acgtttgcgc gcgcggccga acacgccgcc tacgcctgct ccgatgcgcg
      361 cccagatgcg actgcgcgcg agatcgtcga acagtgaata aaacaccggc accgcgagca
      421 gcgtcagcaa caaacacaga gactgtccgc cgaccaccag cacgccaatc gagcggttcg
      481 tgccagagcc gggaccgctt gagatcgtca gcggcaacat gcctgcgacc aacgcaattg
      541 tcgtcatcag aattggacgc agccgatcgc gattcgcctg gatgatcgct tcgtgacgtt
      601 ccatgccctg gcgtcgcaaa ccatttgtgt gatcgatttg taaaatcgcg ttcttcttca
      661 ccactccgaa cagcagcagc aatccgagtc cggaaaagat gttcactgtt tgccccgtca
      721 ccagcagcga gaggatgccg aacggaatcg ccagcggcag cgtcaaaaga atcgttaccg
      781 ggtggataaa cgattcgaac tgcgcggcca aaaccatgta catgaaaatg aacgacagca
      841 cgatcgccaa aagaaagtag tagcccgtac ggctcagttc tttcgaacgg ccggccagcg
      901 acgtctgata cgtgctttcc atgttctctt cgcgcgcgaa ctgttcaagc ttcccgatga
      961 ctgccgcctg cgagccaccc ggtttagtgt tggcggtcaa catcacctgc cgctgccggt
     1021 tgtaacgatc gattgacgat gggcccgtgg cttcttcgac gcgcacgaga ttgtcgagac
     1081 tgacccagcc gagcttttgt gacgcgacga tcatccgctg caagccttcg gcgttcgcgc
     1141 gatactgtcc catcgcgcgc acacgaatgt tgtactgatc gacacccgca ttgaacgtcg
     1201 aaaccttctg gccggcgacc agagtattca gcgcctgcgc aatatcgccg atgcgcacgc
     1261 cgagatcacc ggcgcgggcg cgatcgatca cgacgcgcaa ttccggcttg ccgctaatca
     1321 aagtcgaatc ggcatcgaca acatccggca aggttttcaa cttcgcgagc atgccgttgg
     1381 aatatgccgt cagcttgtcc agatcgggtc cgccgatgac gtactgaacg tcgacattgc
     1441 ggaatccgcc gccggagata gcggccacgg aattgacgct ggtgcgcaat tgatcgggaa
     1501 actccttcac atacttcgca acgatttcgt cgcgcgcgcg cgccatcagg tcgttctggg
     1561 tgacgctgcg ctctccgatc ggcgtcagct tgatgtagat gttcgcgatg ttcacgattt
     1621 gctgttgacc gccgccgatg gttaccagcg tgtcggtcac gcccggcagc ttgcgaagat
     1681 ccgcggccat tcgctccgcc aatcctgagg tgaacgacag cgtcgagcct tccggcgcgc
     1741 gcacgttaac ctcgaattgc gactgatcgt caaccggcag aaagttctta ccgacgaaca
     1801 tgaacaacgg gatcgtgctg atgatcacga agacagacag tccgacaatc gcccagcgat
     1861 gcgccatcga ccactcgagc attctggtgt acgcgcgatc gatcggccgg tagaagcgcc
     1921 cctctttcga atgcgcctga ccgtacttct ctttgaattc cgcgagtgag tagtcgcgtt
     1981 ttctgatttc gggtgaatcg ctgacccggt cgctaccgct ctcggtactg acatgaaccc
     2041 ggtcgctatc ccgactcggc gggatgctga cccgctgctt ccgcttaatc atgcgggccg
     2101 ccagcatcgg cgtcagcgta aacgagacca ggagcgagac agcgatcgca aaagaagcgg
     2161 tgaagccaaa cgacgacatg aagcgcccga ccatacccgc catgaagcca accggcagaa
     2221 atacagcgag cagcgacagg gtcgttgccg tgacggcgag accaatctct ttcgtcccgt
     2281 cgatggccgc ctgaaacggc ggcacgccct tttcttccac gtagcgaaag atgttttcca
     2341 acaccacgac cgcgtcgtcg atcacaatgc cgaccatcaa cgtcagcgcc agcatcgtga
     2401 tttggttcat cgtgaacccc atcgcagcca tcaatccaaa cgtcgcgatg atcgaggtcg
     2461 gaatcgcaat cgccgcaatc aaggtcgagc ggaagctcca gagaaaaacg aaaacaacga
     2521 tcgccgcgag gatgctgcct tcgatcaaat gcaactgaat cgcgtccagc gaggccttaa
     2581 tgaagatcgt ctggtcgccg acgagttgca ccttgacgtc ggacggcagg gtattcttca
     2641 gctcttcgag ccgctctttg acagcgtccg cgaccgcgac tgtgttctga ccggactgtt
     2701 tcgagataac caacgtgacg gccggctgac cattcaagcg cgcttcggtg cgctgctctt
     2761 cggcgccatc ttcgacataa ccgatgtcgc tgagtttcac cgcataaggc ccgcggttcg
     2821 cgatgacgat attgtttaat tccgcggcgt cggttacccg ccccatcgtc cgcacggtca
     2881 tctcgcgctt gccttcttcc acgcggccgc cgggcagctc catgttctgc atgcgcaccg
     2941 agttcgcgac ttccgccgcc gagacgttgt acgcacgcat cttgtcggta tcgagccaaa
     3001 cctgaatctc gcgttcccgg ccgcccacta tctgaacgtt gccgacgccg ctgatcggtt
     3061 cgatctgacg tttgatttgt ttgtcggcaa tgtcagtgac ttcacgcaga gagcgcggcg
     3121 ccgacagagc gatgcgcaac acgggcgtcg cgtcggtgtc cagtttctgg acgatcggag
     3181 tctctgccgt ttccggcaga tcgttttgaa ttagctcgat cttgttgcgg acttcctgcg
     3241 ccgccacgtc cgcattcttc tcgagcacaa aactgatgaa gacttgcgag acgccttcga
     3301 ctgaagtgga gcgcagctca tcgatgccgc taatcgtgtt gacggcgcct tcgagcttat
     3361 ccgtgatttc agtttcgatt tcctgcggcg aggcgccggg atttatcacg ctgacggtga
     3421 tcgtcggcag atcgattttc ggaaacagat cgacgccgag cgagctgtaa gagaacgcgc
     3481 ccacgaccgt aaggctcagg atgagcatcg tcgcgaagac cggacgacga acacaaattt
     3541 cagctaactt ttgcattatc taaatccgtc agtagtcagt ggtcagtagt cagtcgcaac
     3601 ataccgaggc gaaacaactg acaacggacg actgacaact gactgtcatt gtcttatcct
     3661 cgcgccgtca ctcaactgat caacgttagt cgttgccacg atttcatccg ccgccacgcc
     3721 gctattgatt tcaaccagat cgccttcgat ctgtcccgct tgtaccaggc gttgttcggc
     3781 gcgtccgttc ttgatcacga acacgtaagt cgcgcctgaa acctggcgca gagcacgttg
     3841 cggcacgagc acggcaggtt cgctttgcgg ctgaagaatg cgcaccgtcg caaactgtcc
     3901 gggcttcaat tcgccgtttg ggttttggac ttcagcttcg acggtcagcg tgcgcgaggc
     3961 cgcgctgacg ttcggagaga cgcg
//
LOCUS       DATDBY010000454         5483 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2885640, whole genome shotgun sequence.
ACCESSION   DATDBY010000454 DATDBY010000000
VERSION     DATDBY010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5483
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2885640"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VIT19_08485"
     CDS             <1..414
                     /locus_tag="VIT19_08485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839058.1"
                     /translation="LEALHAVEPEMIEPSYSRAFEFISANSRRRSLVVVLTDLVDEEG
                     SAELLTSLKLLRPRHLPLVVTIADRDLRAVVREAPETENDLFTQSVAEEIMYQREAAL
                     RLVESQGGLALDVTAAALVPKLLETYLRVKERGLL"
     gene            complement(392..1366)
                     /locus_tag="VIT19_08490"
     CDS             complement(392..1366)
                     /locus_tag="VIT19_08490"
                     /inference="COORDINATES: protein motif:HMM:NF014052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein M"
                     /protein_id="HEY5839059.1"
                     /translation="MPIDRFINQRKNAWQRLEQLLELLDRMTMRRLHREEVRELGRIY
                     RRTASDLAIARAESRDPRLINYLNSLVIRAHGRIYRANAQGGRRLGTFFARDFPRTFR
                     RTWRYTAAAFAVFLLFSAVAFFGTRYDPNFSEFAGITASWKARNTDRKNRWWERINRE
                     NQVESAGILTNNIRVTFYAFALGATLGLGTLYVMALNGALFGSILALTYRAGYGNDLV
                     TFVAGHGVIELTCIFIAGGAGLLIGTALVMPRDLTRADALKSRGMEAVRLIVGCIPLL
                     VIAGIIEGFISPAPINPLIKFTVAGVTGIALYSYLFLAGRETTEDPVP"
     gene            1423..2352
                     /gene="ftcD"
                     /locus_tag="VIT19_08495"
     CDS             1423..2352
                     /gene="ftcD"
                     /locus_tag="VIT19_08495"
                     /EC_number="2.1.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR02024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030409 - glutamate formimidoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030412 - formimidoyltetrahydrofolate
                     cyclodeaminase activity [Evidence IEA];
                     GO_process: GO:0019556 - histidine catabolic process to
                     glutamate and formamide [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate formimidoyltransferase"
                     /protein_id="HEY5839060.1"
                     /translation="MNPKTQDQSTKNRLVECVPNFSEGRKPEVVDLIAQAIRAVDGAT
                     VLNRHIDSDHNRSVITFVAPPEVIVEAAVRAVAKATELIDLRQHGGEHPRIGATDVLP
                     FIPVSGVAIEDCITLARDAGERIWRELSIPVYFYERAALRLDRERLEHVRGKGFEALR
                     EEIATKLDRKPDVGEPRLHETAGAIAVGARPFLIAFNVTLQTDDILIARRIARVVRER
                     DGGLPFVKALGFDLQSRGIVQVSMNLTNYEQTSIARAFDAVREEATRLEIEVQGTEIV
                     GLVPSAALDRGAAYFPLLENFHEGLILENLLPK"
     gene            2599..3207
                     /locus_tag="VIT19_08500"
     CDS             2599..3207
                     /locus_tag="VIT19_08500"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEY5839061.1"
                     /translation="MGKNPNEEKSPTQTQPGVDNYSQRTYAPYQPEQKAPEAPPAQRA
                     LSESETIAREIKDGTLSGFVGSGTAITGESTFKSLLRIDGKFSGRIASPTGTLIVGAG
                     GVVDANIEVSICTIQGTVNGDVIATQRIELGRAGKLNGNIQTPALMIEQGAVFEGSCK
                     MIQQKAAAEKPARVERKENVIDTPKPEIKAEAPKMASIAAAS"
     gene            3342..>5483
                     /locus_tag="VIT19_08505"
     CDS             3342..>5483
                     /locus_tag="VIT19_08505"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY5839062.1"
                     /translation="MSHRILTLSVLTVTVLFLAPPLSAQRTRAPRAAKVGIDSKILLQ
                     IIRAEDTRRWDGDLGKLLAHADPKVRKRAALAAGRIGNEGAVAPLAERVLTDRDVEVR
                     QTAAFALGEIESGGGAYALTEVLKVRGTDTAPALVRARAVEALGKIVAAATSPGAATK
                     PDAEWLDVVQASIVNTLRFEVNRGAQSDRLTILLALTAVLRAKPEGVGKLVAQCLDHS
                     DSRIVADALNTLARLRLKEGNDKARELLKHNDPIVRANAARVLGATEDKQAFDALLDR
                     ALHDADSRVGISAIRSLASLKDARAVQPLLERGEYLLKLSKVSRQFSIEPRNELLEIA
                     TTLGRLVPNTDNSSAIDFVKRMHQLTNGEAVEVEVAFARMAPGAFTETAFTAEAQAPN
                     SSWRRVSRRAQGLAALNEVIVGAASGSAGDRALKAAQAELVDMLRRPQTPTLAIPDVL
                     QAYAGYKPKDIEQVSRTFLANSDVIVRATAAEILGRSASGEANTRALIGALPVARRDA
                     DNDAALAILDALGKQKTREANDAIATVLDSQDHLVRRRAVSLLKANAVGDVSDRIGTV
                     QTRNTEADYRRAISRIGKKPTATVVTNKGSFTIEFLPEDATLNVDNFLQLAKRGYFNG
                     QTIPRVVAHFVVQAGDPRGDQNGGPGYTIRCEINEVLFERAAVGMALSGKDTGGSQWF
                     VTHSPQPHLDGGYTVFGRVIRGMEVVDRIARG"
BASE COUNT         1214 a         1551 c         1663 g         1055 t
ORIGIN      
        1 ctcgaagcgc tgcacgccgt cgaacctgag atgatcgagc cgagctactc gcgcgcgttc
       61 gagttcattt ccgccaacag ccggcgtcgc tcgctggtcg ttgtgctgac agatttggtt
      121 gacgaagaag gatcggctga attgctgacc tcgctaaaac tgctgcggcc acggcatctg
      181 ccgctggttg tcacgatcgc ggatcgagac ttgagagcag ttgtacgcga agctcccgaa
      241 acggaaaacg atttgttcac gcagtcagtc gctgaagaga tcatgtatca gcgcgaagct
      301 gccttgcgtc tggttgaatc gcagggcggg ctcgcgttgg atgtgacggc cgcggcgctg
      361 gtgccgaagc tactcgagac ttacttgcga gttaaggaac ggggtcttct gtagtctcgc
      421 gtccggccag aaacaaatac gagtagagag cgatacccgt cacgccggcg acggtgaact
      481 taatcagtgg attgatcggc gcgggcgaga tgaagccttc gatgattccc gcaatcacca
      541 acaaggggat acaaccaaca atcagacgca ctgcttccat gcctctggat ttcaaagcgt
      601 ccgcgcgtgt gagatcgcgc ggcataacca gcgccgtgcc gatgagcaag cctgcgccgc
      661 ccgcgatgaa gatacacgtc agctcaatga cgccgtgtcc cgcgacgaag gtgaccaggt
      721 cgttgccgta cccggcccga taagtaagcg ccaggatcga accgaacagc gcgccgttta
      781 gcgccatcac gtacaacgta cccaacccta acgtcgctcc gagcgcgaac gcgtaaaacg
      841 tgacacgaat attgttcgtt aggataccgg ccgactcgac ctggttttcg cgattgattc
      901 gttcccacca gcggtttttc cggtctgtgt tccgggcctt ccacgaggcc gtaatccccg
      961 caaattccga gaaattcggg tcataacggg taccaaaaaa agccaccgcg ctgaacaaaa
     1021 gaaagacagc aaaagccgct gccgtgtacc gccacgtgcg gcgaaaagtt cgcgggaaat
     1081 cgcgggcgaa aaacgttccg aggcggcgcc cgccctgtgc attggcccga taaatgcggc
     1141 cgtgggcgcg aataaccagg ctattcaaat aattgatgag acgcggatcg cgcgattcgg
     1201 cgcgcgcgat cgcaaggtcg gaagccgtgc ggcgatagat gcggcccagc tcgcgcacct
     1261 cttcgcgatg cagccgtcgc atcgtcatcc gatcgagcaa ctccaacagt tgctctaaac
     1321 gctgccaggc gttcttacgt tggttgatga aacgatcaat cggcattgta cttggtactt
     1381 tgtacttggt actttgtgct ttgagcgagg acgttcgtga gagtgaatcc aaagacccaa
     1441 gatcaaagta caaagaaccg actcgttgag tgtgtaccaa acttcagtga aggccgcaag
     1501 cctgaggtcg tagacctgat cgcgcaagcg atcagggcgg tggacggcgc caccgttctc
     1561 aatcgtcaca tcgattcgga tcacaatcga tccgtgatca catttgtcgc tccgcctgaa
     1621 gtgattgttg aagcggcggt acgcgcggtc gcgaaagcaa ctgagctgat cgatctgcga
     1681 cagcatgggg gtgagcatcc gcgcattggc gccaccgacg tgctcccgtt tattccggtg
     1741 agcggcgtcg cgattgaaga ttgtataacg ctcgcccgcg acgccggaga aagaatctgg
     1801 cgcgagcttt cgattccggt ttacttctac gaacgcgcgg ccctgcgctt agaccgggag
     1861 cgtttggaac acgtgcgcgg caaagggttc gaagcgcttc gcgaagagat cgcgacgaag
     1921 ctggatcgta aaccagacgt cggcgagccg cgactgcacg aaacggccgg agccatcgcc
     1981 gtcggcgcgc gacctttcct gatcgctttc aacgtcactt tgcaaaccga tgacattctg
     2041 atcgcgcgtc ggattgcgcg ggtcgtgcgc gagcgcgacg gcggcctgcc gttcgtgaaa
     2101 gcactcggat ttgatttaca gtcgcgcggc attgtgcagg tgtcgatgaa cctcacgaat
     2161 tacgaacaga cctcgatcgc gcgagcgttt gacgccgtgc gcgaggaggc cacgcgcctg
     2221 gagatagaag tccagggaac ggagatcgtt gggctcgtgc ccagcgctgc cctggaccgc
     2281 ggcgccgcct acttcccgct gctggaaaac ttccacgaag gcctcattct cgagaatttg
     2341 ctgccgaagt aaggcccgcc gcggtccaac catcggctta tgctccggcc tggcccaatg
     2401 acgaaattaa actgctggac agccctgcct cctttgttta ttattcctcc cccgctcgag
     2461 gtcgagcggc cccacacagc ggctgaccgg cggtcggtca gtatccaggt tcgcagcgga
     2521 gtaagtattc gtcgcccccc aggcggtcgg gactcgtttc cgctgaacac ttaacggagg
     2581 attagtcata tgctcaggat gggaaagaac cctaacgaag aaaagagccc gacccaaacc
     2641 caacccggcg tcgacaatta cagtcagcgc acatacgcac cgtatcagcc tgaacagaaa
     2701 gcgcccgagg cccccccggc ccaaagggcg ttgagcgaaa gcgaaaccat cgcccgcgag
     2761 attaaggacg gcacattgag cggttttgtc ggcagtggca cggccatcac cggcgagtct
     2821 acgttcaaat ccctgttgcg catcgatggc aagttttcgg gacgcatcgc gtcaccgacc
     2881 ggcacgttga tagtcggcgc cggtggcgta gttgacgcga acatcgaagt ttccatctgt
     2941 acgattcaag gcactgtcaa cggcgacgtc attgccaccc aacgcattga actgggccgc
     3001 gccggaaaat tgaacggcaa cattcagact ccggcgctga tgatcgagca gggcgccgtg
     3061 tttgaaggaa gctgcaagat gatccagcag aaggctgcag ccgaaaagcc ggcaagggtc
     3121 gagcgtaaag agaacgtgat cgacacgccc aagcccgaga ttaaggctga ggcgcccaaa
     3181 atggcgagca tagctgccgc gagctaagac gactcgaaat caaaactgaa ccttgaagga
     3241 cgggcagatt gtccgtcctt tttgtttgcc gcgtcgttgc ggactcacga caatcagtta
     3301 tcgcaaggta caatttgggc acccccctga gacaaaccat gatgagccat cgaatcctga
     3361 cactgtctgt tctgacagtc accgttctgt ttcttgctcc gcctctttct gcgcagcgca
     3421 cgcgagcacc gcgcgcggct aaggtaggaa ttgactcgaa aattctgctg caaatcatcc
     3481 gcgcggaaga tacccgtcgc tgggatggcg accttgggaa gcttctcgcg cacgctgatc
     3541 cgaaagtgag gaagcgcgcg gctttggcgg ccggccgcat tggcaacgaa ggcgccgtgg
     3601 ctccgcttgc cgaaagggta ttgactgatc gggacgttga ggtcaggcag acagcggcct
     3661 tcgcgctggg cgagattgaa tcgggtggcg gggcgtacgc gctgactgag gtcttaaaag
     3721 tccgcggcac cgacacggct ccggcgctcg tacgagcgcg cgcggttgaa gcgctcggaa
     3781 agattgtcgc cgccgccacc agtccgggcg ccgcaaccaa gccggacgcc gaatggctgg
     3841 acgtagtgca agcgtcaatc gtgaatacgt tgaggtttga ggtcaatcgt ggtgcgcaat
     3901 ccgatcggtt gacgattctg ctggcactga ctgccgtgct gcgtgcaaag cctgagggcg
     3961 ttggcaaatt agtcgcgcaa tgtcttgatc actctgattc gcgaatcgtg gctgacgcgc
     4021 tcaacacgct ggcgcggctg cgtttgaagg aaggcaacga caaggcgcgt gagttgctca
     4081 agcacaacga tccaatcgtg cgtgcgaatg ctgcgcgcgt gctcggggcg accgaagaca
     4141 agcaggcatt cgacgcgttg ctcgatcgcg ccctgcacga tgcggattcg cgcgttggaa
     4201 ttagcgcgat tcgctctctg gcgagcttaa aagatgcgcg tgcggttcag cctctgcttg
     4261 aacgtggtga gtatctgcta aaactttcga aagtcagccg gcagttttcg atcgagccgc
     4321 gcaatgaact gcttgaaatc gccacgacgc ttggaagatt ggtgccaaat acggacaact
     4381 catcggctat cgatttcgta aagcgaatgc accaactaac gaacggcgaa gctgtcgaag
     4441 ttgaagtcgc attcgctcgc atggcgcccg gcgcgtttac cgagactgca tttacggctg
     4501 aggcacaggc gccgaattca agttggagaa gagtttcgag acgcgcgcaa ggactagccg
     4561 cgcttaacga agtgatcgtc ggagccgcaa gcggcagtgc cggcgaccgc gcgttgaaag
     4621 ctgcgcaggc ggaactcgtc gacatgctgc gacgtcccca aacgccgacg ctggcaattc
     4681 cggatgtcct gcaagcctat gcgggctaca aaccgaagga catcgaacag gtttcaagaa
     4741 cgttcctggc aaacagcgac gtaatcgttc gcgcgaccgc ggcggagatt ctgggcagat
     4801 cggcttccgg cgaagcgaac acacgcgcgt tgatcggtgc gctcccggtt gctagacggg
     4861 atgcggacaa tgatgccgcg ctcgcgattc tcgacgcatt aggtaagcag aaaaccaggg
     4921 aagcaaacga cgcaatcgcg acggtgctgg actctcagga tcatttggtt cgccgccgag
     4981 ctgtttctct gttgaaagcg aacgcggttg gcgatgtttc ggatcgcatc gggacggtgc
     5041 aaacacggaa cacggaggct gactatcgtc gggccatttc gcgtatcggc aagaagccga
     5101 cggctacggt ggtaacaaac aaaggatcgt tcacgattga attcctgccg gaagacgcta
     5161 cgctgaacgt ggataatttc cttcagcttg cgaagcgagg ttacttcaac ggccagacga
     5221 ttccgcgtgt ggtagcgcac tttgtcgtcc aggccggaga tccgcggggg gatcaaaacg
     5281 gcgggccggg ttacacgatt cgttgcgaaa tcaacgaagt gcttttcgag cgcgccgccg
     5341 tcggcatggc tttgtcaggc aaagacacgg gcggctcgca atggttcgtg acgcattcgc
     5401 cgcagccgca tctcgacggg ggctacacgg tgtttggccg cgtcatccgc ggaatggaag
     5461 ttgtcgatcg gatcgcgcgc ggc
//
LOCUS       DATDBY010000455         2808 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1432984, whole genome shotgun sequence.
ACCESSION   DATDBY010000455 DATDBY010000000
VERSION     DATDBY010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2808
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1432984"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..872)
                     /locus_tag="VIT19_08510"
     CDS             complement(<1..872)
                     /locus_tag="VIT19_08510"
                     /inference="COORDINATES: protein motif:HMM:NF025104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839063.1"
                     /translation="MNSSRLKARTILLLLVEAMLLFGGLVIAVYVRMGAADAEDALIS
                     RHGFYKAALATLFCLTSFYLFDLYDFVVMRDRRELVLRMLQALGLAWVALALMFYALP
                     QVMIGRGVTLISLPLALLLMVGWRLSIHWFLGHPELGERILIVGSGEFAVEIARETLQ
                     RKDAGYRVVGFVDNDPALVGKSLINPKVIGLTSELASLVRRENIDRLVVAINDRRGQF
                     PTQELLKLSLSGDVTIEESASFYERLTGRVLLDMIRPSWLIFSSRGRRARINEIARSA
                     MHRIIALVGAILSLP"
     gene            complement(913..1983)
                     /locus_tag="VIT19_08515"
     CDS             complement(913..1983)
                     /locus_tag="VIT19_08515"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004713 - protein tyrosine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0004715 - non-membrane spanning protein
                     tyrosine kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CpsD/CapB family tyrosine-protein kinase"
                     /protein_id="HEY5839064.1"
                     /translation="MGRVYDALKRAESAPRTSTSSVSQTGNADNVSYFVPRQAEHPWD
                     VSPFTAVPIGFNSASTAHTDEATGGPALPGGPASRDAGATLGAVGSARAVEFSSRVIS
                     TARVEPHLFAVTSPRSPECEHFRALRTKLLEAGERQNMRAFVITSAGIGEGKTLTSLN
                     LAWLLAQTDGVRALLIDADLRRPSTAHYLGIENEVGLSEVLTGETKLAQAIVKLQPAG
                     LHLLPGGAAREDVAELLSGPRFGHLLDEARKHFDYIIIDAPPLGVFTDANLLINRADA
                     ALLVVRSGKTRYAAVDRLLEQLPRERMLGVVLNRAEASSDEAAYYYQQRQYAARPEAV
                     EEDESTDDRELEMIYIEEDMVS"
     gene            complement(1967..>2808)
                     /locus_tag="VIT19_08520"
     CDS             complement(1967..>2808)
                     /locus_tag="VIT19_08520"
                     /inference="COORDINATES: protein motif:HMM:NF024793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY5839065.1"
                     /translation="NKSDLLIELGKVLESRHNRGLRTVLVVDEGHGLSTEVLEEIRLL
                     CNFESDTAKHLQIVLTGQPELREVLNQPNLRQLKQRVALRCEIAALPNVEETAQYIAS
                     RLKVAGAAKTDLFSPGAVDYIFRCAAGIPRNINNLCDNALLNGFASSATVISRVMIEE
                     VAATFDMLPRRTSETPQVQNDSSRIFNSAARAELWAAGNGESGAGVTPVNYAHDAHAT
                     NGNGNGHANDARPDLDSFSLVSPAPEPEIRYSRRTDPISIDQLGSAYSRSSNGRGNNG
                     QSL"
BASE COUNT          588 a          835 c          827 g          558 t
ORIGIN      
        1 ggcagcgaaa ggatggcgcc caccagagcg atgatgcgat gcattgcgct gcgcgcgatt
       61 tcgttgatgc gcgcgcgacg accacggctt gagaagatca gccacgacgg ccgaatcatg
      121 tcgagcagca cgcgaccagt cagccgttcg tagaacgacg cgctctcttc aatcgtcaca
      181 tcgccggaca aactcaactt caaaagctcc tgcgtcggaa actgtccgcg tcgatcgttg
      241 atggcgacca ccagtcgatc gatgttctcg cgtctaacca gcgaagctag ttctgaagtc
      301 aggccgatca ctttcggatt gatcaagctc tttcccacca gggccggatc gttgtcaaca
      361 aagccgacga cgcgatagcc ggcgtctttt cgttgcaacg tttccctggc gatttcgaca
      421 gcaaactcgc cggaaccgac gatcagaatg cgctcgccca attccgggtg gccgagaaac
      481 caatggatcg aaagccgcca accgaccatc aacagcagcg ccagcggcag ggaaatcagc
      541 gtcacgccgc ggccaatcat cacctgcggc agcgcataga acatgagcgc cagcgctacc
      601 cacgcgaggc ccagcgcctg cagcatgcgc aataccaact cgcggcggtc gcgcatgacc
      661 acgaaatcgt agaggtcaaa gagataaaaa gatgtcagac agaagagcgt cgccagggcg
      721 gctttgtaga atccgtggcg actaatcagc gcgtcttcag catccgccgc gcccatccgc
      781 acgtacacag cgattaccag gccgccgaag agcaacattg cttcgacgag cagcaggaga
      841 atcgtacggg ctttaaggcg cgatgagttc atatctttgt gagttccctc tccctctggg
      901 agagggagaa aactacgaga ccatgtcctc ctcgatgtaa atcatttcga gttcgcgatc
      961 gtcggtggat tcgtcttctt caacagcttc cggacgcgcg gcgtactgtc gctgctgata
     1021 gtagtaagca gcttcatcgc tcgaggcttc agcgcgattc agcacgacgc ccagcattcg
     1081 ttcgcgcggc aattgctcca aaagccgatc gacagccgca taacgtgtct tgcccgagcg
     1141 cacaaccagc aacgcggcgt cggcccgatt gatcaagagg tttgcgtcgg tgaacacgcc
     1201 caacggcggt gcgtcgatga tgatgtaatc gaagtgcttg cgcgcttcat caagcagatg
     1261 gccaaagcgt ggacccgaca acagctcagc cacgtcttct cgggctgcgc caccgggcag
     1321 cagatgcagg cccgcaggct gaagtttcac gattgcctgg gccagtttcg tttcgccggt
     1381 cagtacttcg gacaagccaa cttcattttc aattcccagg tagtgcgcag ttgaaggccg
     1441 gcgcaagtcc gcgtcgatca gcagagccct cacgccgtct gtctgggcca gcagccacgc
     1501 caggttcaaa ctcgtcaggg ttttgccttc gccaatgccg gcgctcgtga tgacgaacgc
     1561 gcgcatgttc tgccgctcgc cggcttccaa aagtttcgtg cgcagcgcac gaaagtgctc
     1621 acactcaggc gagcgcggag aagttacggc gaaaagatgt ggttcgacgc gcgcggtcga
     1681 gattactcgc gaagagaact cgacggcgcg cgccgatccg acagcgccca aggttgcccc
     1741 agcatcacgg gaagctggtc cgccggggag tgccggcccg ccggtcgcct cgtccgtgtg
     1801 cgcagtggac gctgaattga agccgatcgg caccgcagtg aacggcgaga catcccacgg
     1861 atgctctgcc tgtctcggaa cgaaatacga gacgttatct gcgttgccgg tttggctgac
     1921 tgaagaagtt gaagtgcgcg gagcggattc ggcccgcttc agcgcgtcat agactctgcc
     1981 cattgtttcc tctcccgttg ctggagcggc tgtaagccga gcccagctgg tcaatactga
     2041 ttgggtcagt acgtcgtgag tatctgattt caggttcagg ggcgggcgaa accagcgaga
     2101 agctgtctag atcgggacgc gcatcgtttg cgtggccgtt tccatttcca ttcgtggcat
     2161 gcgcatcgtg tgcgtaattc acgggtgtga cgcccgcgcc actttcgccg ttaccggccg
     2221 cccacagttc cgcacgtgcg gcggaattga agatgcggct ggaatcattt tggacctgcg
     2281 gcgtctcact ggttcgccgc ggtaacatgt cgaacgtggc cgcgacttct tcaatcatca
     2341 cgcggctgat gactgtggcg ctggacgcga agccgttgag cagcgcgttg tcgcaaagat
     2401 tgttgatgtt gcgcgggatg cccgcggcac agcgaaagat gtagtcaacg gcgcccggcg
     2461 agaagaggtc ggtcttcgcc gcgccggcaa ccttcaaacg agacgcgatg tactgtgcag
     2521 tctcttcaac gttcggcagc gccgcaattt cgcaacgcaa cgcgacgcgt tgtttgagtt
     2581 ggcgcaggtt cggttgattc aaaacctccc gcagctccgg ctgtccggtt aaaacgattt
     2641 gcaggtgctt ggcggtgtct gactcgaagt tgcacagcag gcgaatctct tccagaactt
     2701 ccgtggacaa gccgtgtcct tcatcaacga ccagcaccgt gcgcaggccg cggttgtgac
     2761 gcgactcgag aactttgccg agttcgatca gcaggtccga tttgtttt
//
LOCUS       DATDBY010000456         3452 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2051014, whole genome shotgun sequence.
ACCESSION   DATDBY010000456 DATDBY010000000
VERSION     DATDBY010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3452
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2051014"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            311..1663
                     /locus_tag="VIT19_08525"
     CDS             311..1663
                     /locus_tag="VIT19_08525"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5839066.1"
                     /translation="MKLRKRVQPTVETTPSVGYIELLRKNRQFRMLWLGQVVSQMGDW
                     FDTIAVYTLALQLTGSSRSVALIMVARFLPSVVMGPLSGVVADRFSRRSIMIASDIMR
                     ALVVLGFLFVRRPDQMWLVYVLTVLQLAFSAFFEPAKTAAIPSIVSDRELLPANAIAS
                     VTWSIMLTTGAAIGGVVTGLFGTNAAFVLDSLTFVASAILISRVRFPKRPAREKTKLT
                     VAKAVGITDTLEGARYVKQRPRVFAYLMVKTAWGVGGGILTLLAVFGERVFPVGGKTA
                     TGIGVLFTARGIGTAVGPIVARRWVGETRRHMQTSIGVAFWIAGVFYIAFGTSTSFTL
                     ALLFLLIAHAGGSILWVYSTVLLQQTVEDQFRGRVFAAELTLVTLTMAASNYAVGELM
                     DRFGFSPRVVTAAVGAFFLLPGLMWFVSRKWWDRSVDVSVAQAFTPGNKRQTESIEPP
                     "
     gene            1765..2289
                     /locus_tag="VIT19_08530"
     CDS             1765..2289
                     /locus_tag="VIT19_08530"
                     /inference="COORDINATES: protein motif:HMM:NF037785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839067.1"
                     /translation="MKIKIGVMGSAEEMPDVCQKAEALGQAIAARDAILLTGATTGLV
                     YVTGKAARDAGATHVGISPAQNAEEHVERYGLPLDACDAIIYTGFGLKGRNVVLVRSC
                     DLVIFISGSIGSLNEFTIGYDEGKVIGCLTGTGGVADEIKRLAEIFPKQTKSRILYDD
                     DPVRLIDECLSAVP"
     gene            2453..3244
                     /locus_tag="VIT19_08535"
     CDS             2453..3244
                     /locus_tag="VIT19_08535"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY5839068.1"
                     /translation="MDLGIKDRVALVAAASRGIGYAAALELAREGARVFLCSRDEQRS
                     SQAAQAIHNETGANVAGIAADVTDGHDTERFVTLALERAGRVDICVTNAGGPPATVFD
                     DTDIEMFRQAFELNALSAIRLAKLVLPGMRERKWGRIINVTSISVKQPVEGLLLSNTV
                     RAGLTGWAKTVSNEVASDGVTVNNVAPGYTLTERQDQLAEARSKALGKSKQEIIELWA
                     AQTPMRRMASAEEIAAAIAFLASERASYITGVTLQVDGGWTRGLF"
BASE COUNT          709 a          928 c         1053 g          762 t
ORIGIN      
        1 gccgtctggg gtgcagtaac agggcaaaag agtcgcgcgc ttcggatcat aatttttcgc
       61 ggctagcgga cccagtgcgg tgggcccaac agcggttaag cttttcctag ccgcgcctct
      121 cacgattaca acgcgcgtgc cgcaagtatc tttcggcaaa gctggcctat ttcggcggat
      181 ttgcgatgac accgagagcg ttcatcgagc agatgcggtc acgtttctca ttctgaccag
      241 tcagagtgac gggactcgcg ttgacaactt catttggcga gtgcaccttt catcatcttc
      301 caaaaatcgg atgaagcttc gaaaaagagt tcaaccaacc gtcgagacga caccgtcagt
      361 cggttatata gagctgcttc ggaagaaccg acagttccgc atgctttggt taggccaggt
      421 ggtcagccag atgggcgatt ggttcgacac gattgccgtt tacacactgg cgctgcaact
      481 gacgggttcc agtcgatcag tcgcactgat catggtcgcg cgttttctgc cgagcgtcgt
      541 catgggccca ctctcgggtg tcgtggccga cagattcagc cggcggtcaa tcatgatcgc
      601 gtcagacatc atgcgggcgc tggtggtact cggatttttg ttcgtgcgcc ggccggatca
      661 aatgtggctg gtgtatgtac tgacggtttt gcagctggcg ttctcagcat tcttcgaacc
      721 ggccaagacc gccgccattc cgtcgatcgt ttctgatcgc gagttacttc cggcaaatgc
      781 aatcgcgtcg gtgacgtggt caatcatgtt gaccaccggc gcagccatcg gcggcgtcgt
      841 caccggattg ttcgggacga atgccgcgtt cgtgctcgat tcgctgacat ttgtcgcctc
      901 ggcaattctg atcagtcgcg tgcgttttcc gaaacgcccg gcgcgtgaga agacaaaact
      961 gaccgtcgcg aaagccgtcg gcatcacaga cacacttgaa ggcgcccgct atgtgaagca
     1021 gcggccgcgc gtgttcgcgt acctgatggt caagaccgcc tggggagtgg gcggcgggat
     1081 cttgacgttg ctcgccgttt tcggcgagcg agtttttccg gtaggcggca agaccgccac
     1141 gggcatcggc gtgctgttca cggcccgggg catcggcacg gcagtcggac caatcgttgc
     1201 acgtcggtgg gtaggtgaaa cacgccggca tatgcagact tcgattggcg tcgcgttctg
     1261 gatcgccgga gttttttaca tcgcgttcgg aacttcgacg agcttcacgc ttgcgttgct
     1321 gtttctgcta atcgcccacg ccggcggcag catcctctgg gtgtactcaa cggtgctctt
     1381 gcaacaaacc gtcgaagatc agttccgtgg ccgtgtcttt gctgctgagt tgaccctcgt
     1441 cacgctgacg atggcggcgt cgaattacgc tgtgggcgaa ctgatggatc gtttcggatt
     1501 ctcgccgcgc gtggttacgg ccgcggtggg tgcgtttttt ctgctgccgg gattaatgtg
     1561 gttcgtgagc cggaaatggt gggaccgcag tgtcgatgtt tctgtagccc aggcgtttac
     1621 gcctgggaac aagcgtcaaa ctgaatccat cgaacctcct taaggaggtt ttcatacatc
     1681 gtgaatctgc gtccgcccca taaatggggc attacaacca gaactctggc gacccaggcg
     1741 tgaacgcctg ggctagagaa agtcatgaag atcaaaatcg gcgtcatggg ttcggcggaa
     1801 gaaatgccgg acgtttgcca aaaagcagag gcgttgggcc aggcaatcgc cgcgcgtgac
     1861 gcaattctgc tgaccggcgc aacaaccggt ttggtttacg taaccgggaa agccgcgcgg
     1921 gatgccggtg ccacacatgt cggcatctcg cctgcgcaaa acgccgagga gcacgttgag
     1981 cgatacgggt tgccgctcga cgcttgtgac gcgatcatct acaccggctt cggattgaaa
     2041 ggtcgcaacg tcgtactggt gcgttcgtgc gatctcgtga tattcatttc cggctcgatt
     2101 ggatcgctaa acgaattcac gattggctac gatgaaggaa aagtaatcgg gtgtctgacg
     2161 ggaacgggcg gagtcgcgga tgagatcaaa cgcctggcag agatctttcc gaagcaaacc
     2221 aaatcgcgaa ttctgtacga tgacgatccc gtgcgattga ttgacgagtg cctgtcagca
     2281 gtcccgtagg gacgaaatgt ttatagttac cggcagaaat ttatttttaa gcccatttat
     2341 gggcggcgtc tacttcgctc ctttggagct ctgctaatca tggcatcggt ggttgctata
     2401 acatcactcc gctccgcggc tgacgccaag tgctgatcga aaaggtttct tcatggactt
     2461 aggaataaaa gatcgcgttg cattggtcgc ggccgccagt cgcggcattg gctacgcggc
     2521 cgcgcttgag ttggcacgcg aaggcgcgcg cgtgtttctc tgctcgcgcg atgaacagcg
     2581 ctcttcgcaa gccgcccagg ccattcacaa cgagacgggc gcgaacgtcg ccggcattgc
     2641 tgccgacgtt actgacggcc acgataccga aaggtttgtc acgctggctc ttgaacgcgc
     2701 cggccgcgtg gacatttgcg tgacgaacgc gggcggtccg ccggcgacag ttttcgacga
     2761 tacggacatc gagatgtttc gccaggcgtt cgagttgaat gctctgtctg cgattcgact
     2821 ggcgaagctc gttttgcccg gcatgcgcga gcgcaaatgg ggccgcatca tcaacgtcac
     2881 ctcgatctcg gtcaaacagc cggtggaagg cttgctgctt tccaacaccg tgcgcgccgg
     2941 attgaccggt tgggccaaaa ccgtttccaa tgaggtcgcc agcgacggcg tgacggtgaa
     3001 taacgtcgcg ccgggttata ctctgacgga aagacaggat caattggccg aggcgcgcag
     3061 caaggctctg gggaagtcga aacaggagat aatcgagctc tgggcggcgc aaacgccgat
     3121 gcgacgcatg gcgagcgcgg aagaaattgc cgcggcgata gcgtttctcg cttcagagcg
     3181 cgcttcttac atcactggcg tgacccttca agttgatggc ggatggacgc gaggattgtt
     3241 ttagaagatg gtcgccacaa aactgcgagc agtatcggat acagcttaaa cttctaacct
     3301 tcgaggaccg tagattatgg cacgtggatg ggaaagcaag tcgatcgagg atcagattgg
     3361 cgacgccgag gccgctaagg aagatcaggc aaaacagacc ctctctcagc aggggcgcgc
     3421 actcgagaac cagcggcaga atctgcagct ct
//
LOCUS       DATDBY010000457         2377 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1645993, whole genome shotgun sequence.
ACCESSION   DATDBY010000457 DATDBY010000000
VERSION     DATDBY010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1645993"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..782)
                     /locus_tag="VIT19_08540"
     CDS             complement(<1..782)
                     /locus_tag="VIT19_08540"
                     /inference="COORDINATES: protein motif:HMM:NF024748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY5839069.1"
                     /translation="MKVRRAITCSMLALMLFGTTSVAAQNGRDLDGRMRAEMSGFKGK
                     VFLYAKNLDTGQTYSLNGDERVRTASTIKIAVMIEAFARVADGRAKWTDELVLTKAAR
                     YGGSGILPELSDGLRLTLQDAVRLMMVLSDNTATNMVLDYLTTDAVNERMNLLGFKAT
                     RIMRRVGGGGESKEGKLGDNLKRFGLGATTTHEMVQIMEKLERGDIVSKEASKQMLDL
                     MKREQGRNSIGRDLPGVPMASKYGALDALRSCVAILYTKQGK"
     gene            1013..1528
                     /locus_tag="VIT19_08545"
     CDS             1013..1528
                     /locus_tag="VIT19_08545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839070.1"
                     /translation="MPALIKKIELLANIAIILVAILLGVALVRSFLIRPPATQPTRPG
                     LSIAPGTKLSLTGVDWNGNGKTLILALSTNCRFCTESAPFYQRVVAERTKTGSPRLIA
                     VFPQPVAEGQTYLKELGVAVDEVKQVRLDSLGVAGTPMLIMADSQGAVVETWGGKLPG
                     EKETELLNRIK"
     gene            1596..2066
                     /locus_tag="VIT19_08550"
     CDS             1596..2066
                     /locus_tag="VIT19_08550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839071.1"
                     /translation="MRKDLFRLFRRVAILGVLGFGLFMVSNSPMTPVTLADDYCSYCQ
                     PFYNQCMSWCEGNYWNCIWSSPPGTDCVSPYESCTNGCYANQLFCQENCSGGGGGGGG
                     GGTQKSPCELACYSARASCFGNHGIPDVEDCINEGGTYVVCCNSAFYDCMSNCE"
     gene            complement(2173..>2377)
                     /locus_tag="VIT19_08555"
     CDS             complement(2173..>2377)
                     /locus_tag="VIT19_08555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839072.1"
                     /translation="EYAYEIKIRNHKDTAVNVIVNEPIGGDWEMISSSFEAKKTAAFA
                     AQFNVPVAKDGEATLSYRVRVRY"
BASE COUNT          516 a          672 c          632 g          557 t
ORIGIN      
        1 atctttccct gcttcgtgta gaggatggcg acgcagcttc gcaacgcatc aagagcgccg
       61 tatttgctcg ccatcgggac gcccggcagg tcccggccaa ttgagttgcg accttgctcg
      121 cgcttcatca gatcgagcat ctgctttgaa gcttccttgc tgacgatgtc gccgcgctct
      181 aatttctcca tgatctgaac catctcgtgg gtggtcgttg cgccgaggcc gaaacgcttc
      241 aggttatcgc ctaacttccc ttccttgctt tctccgccgc cgccgacgcg acgcatgatg
      301 cgcgtggctt tgaaaccaag taagttcatg cgctcgttaa cggcatccgt cgtcagataa
      361 tccaggacca tgttcgtcgc cgtgttgtca ctcagcacca tcatcagacg cacggcgtcc
      421 tgcagcgtga ggcggagccc atcgcttagt tccggaagaa ttcctgagcc gccgtatcgt
      481 gcggccttgg tcagaaccag ctcgtcagtc cacttagcgc ggccgtcggc gacccgcgcg
      541 aacgcttcga tcatcaccgc gatcttgatc gtgctcgccg ttcgaacgcg ttcgtcacca
      601 ttgagcgagt aggtttggcc ggtgtcgagg ttcttggcat aaaggaagac ctttcccttg
      661 aagccggaca tttcagcacg cattcggcca tcaaggtcgc gaccattctg cgcagcgaca
      721 ctcgtcgtgc caaacagcat gagcgcgagc attgagcagg tgatcgcccg tcgaaccttc
      781 atcagacctc cccttgcggt ggctaccggc gttatggatc gtgcagtctg actgcgcctc
      841 ccgagcaagt caaccatgtg cttgcgcctc aaaatccaca aggacgcttt tttcgtcccg
      901 caagggcatc agaagtaaac aaaagatttt gattgacttg gcataaatgc tggcatagac
      961 tccaccccac ttttcaaagg tcctcgcaac ctctagaaag taatcgaccg ttatgccggc
     1021 gctaatcaag aagattgagc tgcttgccaa cattgccatc atactcgtgg cgatcctgct
     1081 gggagttgct cttgtcagaa gctttttgat acggccccct gccacgcagc ctactaggcc
     1141 cggcttatcg atcgcgccag ggacgaaatt gtcgctgaca ggcgttgatt ggaacggaaa
     1201 cggcaagaca ctgattctag cgctttcgac aaactgccgg ttctgtacag agagcgctcc
     1261 cttttaccag cgcgtagttg ccgagcgtac aaaaacgggc agcccgcggc taatcgcagt
     1321 atttccgcaa ccggtcgccg aaggacaaac atacctgaaa gaacttggcg tggcagtgga
     1381 tgaagtgaag caggtccgac tggactctct cggcgttgcc ggaaccccaa tgttaataat
     1441 ggcagacagc cagggagctg tagttgagac ctggggagga aagctgccag gcgaaaaaga
     1501 aaccgaactg ctcaatcgta ttaagtaaaa atccgaacct gctcaaatct cgtacaaggg
     1561 gaagtttttc aatcttcaga aacgaggtga caacaatgcg aaaggatttg tttaggctgt
     1621 tcaggcgagt cgccattctc ggcgtgctgg gatttggcct cttcatggtc tccaactcgc
     1681 cgatgacgcc tgtgacactg gcagatgatt attgctcgta ctgccagccc ttctataacc
     1741 agtgcatgag ctggtgcgag ggcaattact ggaactgtat ctggagttcg ccaccaggta
     1801 ccgattgcgt ctcgccttat gagagctgca ccaatggctg ctatgcgaac caattattct
     1861 gccaggagaa ctgttcaggc ggcggcggtg ggggtggtgg cggtgggacg caaaaatcac
     1921 cgtgtgagct ggcctgctat tcggcccgcg cttcctgctt cggcaatcat ggaatccctg
     1981 atgttgagga ctgcatcaac gagggaggaa cctatgtcgt ctgctgcaat tcggcatttt
     2041 acgattgcat gtcgaattgt gagtaagatc actctcgcaa gagcagcgat cgcttgcagt
     2101 ggtcgctgct cttttcaatt agacggcaca cctcaacaac atggctcgcc gtaactgtct
     2161 ggacaattct cgttagtacc gcacgcgcac gcgatagctc aacgtcgcct cgccgtcttt
     2221 cgcgacgggc acgttaaact gggcggcaaa cgcggcggtc ttcttcgctt caaaactcga
     2281 cgaaatcatt tcccaatccc cgccgattgg ctcgttcaca atcacgttca ccgcggtgtc
     2341 tttgtgattg cgaatcttga tttcgtaagc gtactcg
//
LOCUS       DATDBY010000458         4789 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_594204, whole genome shotgun sequence.
ACCESSION   DATDBY010000458 DATDBY010000000
VERSION     DATDBY010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4789
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_594204"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..552)
                     /locus_tag="VIT19_08560"
     CDS             complement(4..552)
                     /locus_tag="VIT19_08560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839073.1"
                     /translation="MKIKLTVMLLTLAALVTLGSQLRAGISAAVAGNYVNNDYRGGSS
                     FTFVGAGPNVARCGAFPENIELSFQGSGIDTEGGYNTAVFSACTNTTTNLVFDLKATD
                     TYVNGDQVFIEGDPFVLAPNPAICIATNAHAVPFRVAGGTGGHAGATGHGHFHITSNL
                     TPCNGQTPPSQVWFDGVIKVPQ"
     gene            896..3718
                     /locus_tag="VIT19_08565"
     CDS             896..3718
                     /locus_tag="VIT19_08565"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY5839074.1"
                     /translation="MKALKSALLVLFLFSALNPVTAQKPAPKGVFKVDYEKFTLANGL
                     QVIFHVDRSDPVVAVALTAHVGSAREKAGRTGFAHLFEHLLFLESENLGKGGLDKMSA
                     RIGGSGANGSTNRDRTNYFQTVPSDALEKMLWAEADKLGWFINTVTDSVLAKEKEVVK
                     NEKRQGVDNNPYGHTTYVIDRALYPEDHPYNWQVIGSLEDLQRATLADVKEFFRRWYV
                     PNNVTLVVAGDFDPVQAKKWVEKYFSEIKKGEEIKPLPKRPGVVKETVSLYHEDNFAS
                     LPELTRVWPAVEDYHPDSYPLDVLARYLSQGKKAPFYQVLVEEKKLTDVVRMSNGTSE
                     LAGQFGVQVRAFPDKDLDDVSKALDEAFAKFEKEGISEKDLSRIKAGQETQFYNSLSS
                     VLGKGFQLAQYNIFAGDPGFVAKDIENILAVTPADVTRVYQKYIKNKPFVATSFVPKG
                     KAAQALEGARKAEVVEEKIVQGAEQSVDPSSRAAYERTPSTFDRSVEPAYGKAPEVKV
                     PAIWEDKLTNGLRVLGIQNTEVPLMQFDVVIDGGQLLEDMNRVGVANLMARMMTQGTQ
                     RKTPQELEEAIQQLGATISVTASAENVRVRVNTLAKNYDATLALVEEILLEPRWDAKE
                     FDLIKQSTISQIRQQQANPNAIAQNHFNLLIFGKDNIRSQNILGTIDSVNAITLDDLK
                     AFYARSISPSVARLNVVGALDKATITSSLKRIESKWASKKVDIPAYKTPEAPAKSVVY
                     FYDVPDAKQSVIRFGYPALAQTDKDFYPATVMNYILGGGSFASRLTQVLREGKGYTYG
                     INSAFSGTQSPGAFTIASGVRANVTLESAQLIKDILREYPKTFTEADLATTKGFLIKS
                     NARAFETADAKLNMLENIGKYGWKYDYVKEREQIVRGMTVQQVMALSGKYLNTDRMIW
                     LVVGDAKTQLPRLKELGFGEPVLLGK"
     gene            3963..>4789
                     /locus_tag="VIT19_08570"
     CDS             3963..>4789
                     /locus_tag="VIT19_08570"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY5839075.1"
                     /translation="MKLTRRSFIGGVATGAALLLRREATTSGKTNSLSPPKTSRANRP
                     NVIFILADDLGWGDLSCYGRPDYRTPNLDLLASQGVKFTDAYSASAVCTPTRVGFITG
                     RYPARLKIGLLEPLPANNLTVGLDPGHPTIASLLKTSGYDTALIGKWHLGFRPEWGPN
                     AHGFDEFFGNLAGAVDYHLHKTGRGAPDLYENLKPVEQHGYMTDLLTDRAVKYIRRRR
                     TSPFYLSLHYTAPHWPWQDRKGGERVTFTDKTIEPVTMGGGGSLKLYAEMMRSLDEGV
                     "
BASE COUNT         1117 a         1269 c         1344 g         1059 t
ORIGIN      
        1 cgcttactgc ggcaccttaa tcactccgtc aaaccaaact tgtgacggcg gcgtttgccc
       61 gttacacggc gtcaggttgc tcgtaatgtg gaagtgcccg tggcctgtcg ccccagcgtg
      121 acctcctgtt ccaccggcga cacggaacgg tacggcatga gcgtttgtcg cgatgcagat
      181 ggcagggtta ggcgccagca cgaacggatc cccttcgata aaaacctgat cgccgtttac
      241 ataggtgtcc gtcgctttca ggtcgaagac gagattcgtc gtagtgtttg tacaggctga
      301 gaagacggca gtgttgtagc cgccttcggt gtcaattccc gagccctgga aactcagctc
      361 gatattttcc ggaaacgcgc cgcagcgcgc gacatttggt ccggcgccta caaaagtgaa
      421 gcttgagcca cctcggtaat cattattgac gtagttacct gcgacggcgg cggaaatgcc
      481 ggcgcgaagt tggctgccaa gcgtcaccag cgcagcgaga gttaagagca tcaccgtgag
      541 tttgattttc atttgtatcg gtcctccttt gggtggttgt gactgtttgt gctcgagcgc
      601 ctcgcgattg cgcatggaaa tcgaagccgg ccgctctgtc aggccaaagg tgagtaggga
      661 catgtcgcgg gttctccttt gctgggcgcc tcatctgtga tggctcagga ttcgtgggcg
      721 ccagtcgtgc aagcttcttg gcgcgagaca atattcgagt tacgaactgt agtcaatatt
      781 ttggcgacga gatcgcgggt tcggacaaac acggccgtcc ctcgcggtca gctaatcccc
      841 ggcgtagtat cttttccaaa ctttttggta aggtcagcgt atctacacca tgcttatgaa
      901 agccctgaaa agtgctcttc tcgtcctctt tctgttctca gcattgaatc cggttactgc
      961 tcagaagccc gcgccaaagg gtgtcttcaa agttgattac gagaagttca ccctcgccaa
     1021 cggcttacag gtgatctttc acgtcgaccg ctcagatccg gtagttgcgg tcgcgcttac
     1081 tgcgcacgtc ggttcggcgc gagagaaggc gggccgcacc gggtttgccc atctgtttga
     1141 acacttgttg tttctcgagt cggagaatct gggcaaaggc ggtctcgaca aaatgagcgc
     1201 gcgcatcggc ggctcgggcg cgaatggctc gaccaaccgc gatcgcacca attatttcca
     1261 gactgtaccc agcgatgcac tggagaaaat gctttgggcg gaagccgaca agctcggctg
     1321 gtttatcaac acggtaaccg attcggttct cgcgaaggaa aaagaagttg taaagaacga
     1381 gaagcgtcaa ggcgtcgaca ataatcccta tggccacacc acctatgtaa ttgatcgggc
     1441 gctttacccg gaagaccatc cctataactg gcaggtaatc ggttcgctcg aagatctgca
     1501 gcgagcaacg ctcgccgacg taaaggaatt cttccggcgt tggtatgttc cgaacaacgt
     1561 cacgctggtg gtggccggcg atttcgatcc ggtgcaggcg aaaaaatggg tggaaaaata
     1621 cttcagtgag atcaaaaaag gcgaagagat taaaccgctt ccgaaaagac cgggcgttgt
     1681 caaagaaacc gttagcctct accacgaaga caacttcgcg agcctgcctg aactaaccag
     1741 agtttggccg gccgtcgagg attaccatcc cgattcttac ccgctcgacg tgctggcccg
     1801 gtatttgtcg caaggcaaga aggcgccctt ctatcaggtc ttagttgaag aaaagaaatt
     1861 gaccgatgtg gtaaggatgt cgaatggaac ctcagaactc gcgggccagt tcggagtgca
     1921 ggtacgtgct tttccggaca aagaccttga cgatgtgtcg aaagcgcttg atgaagcgtt
     1981 cgcaaaattc gagaaagagg gcatttccga aaaggaccta agtcggataa aagccggcca
     2041 ggaaactcag ttttacaatt cactctcgag cgtgctcggc aaagggttcc aactcgcgca
     2101 atacaatatc tttgccgggg atccgggttt cgtcgccaaa gacatcgaga acattctggc
     2161 agtgaccccc gcggatgtga cgcgcgtcta tcaaaagtac ataaagaaca aaccatttgt
     2221 ggcgaccagt ttcgtgccga agggcaaggc ggcccaggcg cttgagggcg cgaggaaagc
     2281 cgaggtagta gaagagaaga tcgttcaggg cgcggaacaa agtgttgacc cgagttctcg
     2341 ggccgcttat gaacgcaccc cttcaacttt tgatcgcagt gtcgaacctg cttacggcaa
     2401 ggcgcccgag gtcaaggtcc cggcgatttg ggaagacaag cttacgaacg gattgcgggt
     2461 tctgggaatt caaaacaccg aagtcccgtt gatgcagttc gacgttgtga tcgatggcgg
     2521 ccagctgctt gaagacatga accgggtggg cgttgcaaat ctgatggccc gcatgatgac
     2581 gcagggaacg cagaggaaga cgcctcagga gcttgaagaa gccatccagc aactgggggc
     2641 gacgatcagc gtgaccgcct cggctgagaa tgtccgcgtc cgggtcaata ccctggcaaa
     2701 gaactacgac gccactctgg cgctggtcga agagatcctg ctcgagccgc gttgggacgc
     2761 caaggaattc gatctgatca agcaaagcac catcagtcag attcgccagc agcaagctaa
     2821 tccgaatgcg attgctcaga atcactttaa ccttctgatt ttcgggaagg acaacatccg
     2881 ttcgcaaaat atcctgggca ccatcgactc ggttaatgcg attacgctgg atgatttgaa
     2941 agcgttttat gcccggagta tctcgccgtc ggtcgcgcga ttgaatgttg tgggggcgct
     3001 ggataaagcg acaattacct cttcgctaaa acgaattgaa agtaaatggg cgagtaagaa
     3061 ggtcgatatc cccgcttaca aaacgccgga agcgccagct aagtccgtag tgtattttta
     3121 tgacgttccc gacgccaagc aatccgttat tcggtttggt tatccggccc tggcccagac
     3181 cgataaggat ttttatccag ccaccgtcat gaactacata cttggcggcg gtagttttgc
     3241 ttcccgcctg acgcaggttt tgcgcgaggg caaaggctat acgtatggga tcaactccgc
     3301 cttttccgga acgcagagtc ccggcgcctt cacaatcgcc agcggcgtga gggcgaacgt
     3361 taccctcgaa tccgctcagt tgatcaagga catccttcgg gagtatccca agacttttac
     3421 cgaagccgat ctggccacca ccaagggctt tctgatcaag agcaacgcgc gggcttttga
     3481 aaccgcagac gccaaactga acatgctgga gaatatcggc aagtacggct ggaaatatga
     3541 ctacgtgaaa gagcgcgagc aaatcgttag agggatgacg gttcagcagg taatggccct
     3601 gtcgggaaaa tatctgaaca ctgaccggat gatctggctg gtggttggag acgccaaaac
     3661 ccaactgccg cgcctgaaag agctgggctt tggtgagccg gttttgcttg ggaagtaggc
     3721 cgggcgttga tgcagaaacc cgaccgtcag ggagggagcc gaatttcgag gtccgccgta
     3781 gagttcattg caccctccct gacggtcggg tttctgcacg cgtcgcttta ccaactcacg
     3841 cccgactttg cagccaagcc ccaacgatgc agtagatctc accggttttt tgattcgcga
     3901 aaacttcccg atctcaccag aaatttcgcc ccgctgtctt gtttacattg tagtattcga
     3961 caatgaaact gacgcggcgg agctttatag gcggagtagc aaccggtgct gcgctgcttt
     4021 tgcgacgtga ggcgaccacc tcagggaaaa cgaattcact ttctccgcca aagacttcgc
     4081 gagcgaatcg gcccaatgtc atcttcattc tggccgacga tctcggctgg ggtgatctca
     4141 gctgctacgg ccggcccgac tatagaactc ccaatctgga tctgcttgct tcacaaggtg
     4201 tgaagtttac tgacgcatat tctgcttcag ccgtctgcac tccgacacgc gtcggattta
     4261 ttacgggccg atacccggcc cgactcaaga tcggcttact cgagccgttg cccgcgaaca
     4321 acctgaccgt gggcctggat ccaggtcatc cgaccatcgc ttcactactc aagacgagtg
     4381 gctatgacac agcgctgatc ggaaagtggc atctcggctt tcgtcctgag tggggaccga
     4441 atgcgcacgg attcgacgaa ttttttggga atctcgcagg cgcggtagac tatcacctgc
     4501 acaagaccgg tcgcggcgcg cctgatctgt atgagaatct aaaacccgtt gagcagcatg
     4561 gttatatgac cgatttgctc accgatcggg cggtcaaata cattcgccgg cgtcggacct
     4621 caccgttcta cttaagtctt cattacacag ctccgcactg gccctggcag gatcgcaaag
     4681 gcggcgagcg cgtcactttc accgacaaaa ctattgaacc agtcaccatg ggcggtggcg
     4741 gctctctcaa gttgtatgcg gaaatgatgc gcagtttgga tgagggtgt
//
LOCUS       DATDBY010000459         2469 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1306271, whole genome shotgun sequence.
ACCESSION   DATDBY010000459 DATDBY010000000
VERSION     DATDBY010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2469
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1306271"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..575
                     /locus_tag="VIT19_08575"
     CDS             <1..575
                     /locus_tag="VIT19_08575"
                     /inference="COORDINATES: protein motif:HMM:NF024297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY5839076.1"
                     /translation="PDCFHLAIFGVSHKLVSKMVAWAQAEAILSRSDNKSPKGPTKMK
                     RIIATAVLVLTFCCAGAYAQEADKERAAIKQTALDYVEGWYEANAERMERALHPELAK
                     RIVRNSPEGRSRLDQMSAMALVQGVKRGGGKDTPKENQQKDVIILDVFENTASVKAVM
                     SGWIDYMHMAKFNGRWVIVNVLWELKPQKK"
     gene            596..1324
                     /locus_tag="VIT19_08580"
     CDS             596..1324
                     /locus_tag="VIT19_08580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839077.1"
                     /translation="MYRIRGVLLGVGVIGLMSLSLAVQPTKTQMEPGASVEPPHAVPL
                     PRFNSIVLDGGAKAVIQYGSPQRVTMLKGSEDLSLITVTQDRLVVNKCRDKCPRGYEL
                     QVEIVTPLINAIAVTNGGVIESRGDFPLQTAMSLAVNHGGTVDARTISANNITAAVAQ
                     GGRILAKPETTMVASVSNGGVITYWGNAQVMSSTEHGGAITKGAASDLNKPLSDVEAP
                     VSCPTTPAPPAPPAGAKRSRTIVI"
     gene            1439..>2469
                     /locus_tag="VIT19_08585"
     CDS             1439..>2469
                     /locus_tag="VIT19_08585"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY5839078.1"
                     /translation="MVCIRVAAQGDLVKNDGITSPLHRANVGRIVFTANAVPIESLAP
                     ADFINTTELRETADLSLRVFMGNSLTNYLHKLQPHLTVEELNRQGSYQFSFFVDDALV
                     HEENLNPYWVRADTKIKLTTLGFTLLNSAEPDSAGAGTRIWRLFLMNGGQQALTAGTH
                     RLKIELRPYVKTSETRVGDLIATGEIQLVVPAKPKVDEKVAAIQSIRPNSGWQISKAA
                     YDRGKIEELNRMIAENVYREITSVVVIRGGGLLIEEYFNGATRDTLHNTRSVGKSFAS
                     TILGMAIQDGHIKSENQSLKDFYDLKKFANYSPKKESVTIKSLLTMSSAFDGNDDDAN
                     SPGNEEKMYP"
BASE COUNT          627 a          647 c          696 g          499 t
ORIGIN      
        1 acccagactg ttttcacctc gcgatcttcg gcgttagcca caaactagtt tccaaaatgg
       61 tcgcgtgggc ccaggctgag gcgattctga gccgaagtga caacaaatca ccaaagggac
      121 cgacgaaaat gaaacgaatc atcgctaccg cagtgttagt tctgacgttt tgctgcgccg
      181 gagcctatgc ccaggaggcc gacaaagagc gcgcggcaat taaacagacg gcgctcgact
      241 atgttgaggg ctggtacgaa gcgaatgccg aacgaatgga acgcgcgctc caccccgagc
      301 tcgccaaacg aatcgtgcgc aacagtcccg aaggccgtag ccgcctggat caaatgagcg
      361 cgatggcgct ggtgcagggc gtgaagcgtg gcggcggcaa ggatacgccg aaagagaatc
      421 aacagaagga cgtgatcatc ctggatgtct ttgagaatac tgccagcgtg aaagcagtca
      481 tgtcgggctg gatcgactat atgcacatgg cgaagtttaa cgggcgctgg gtgatcgtga
      541 acgtcctttg ggaattgaag ccgcagaaga aataaccgat taggaggagg gaaacatgta
      601 cagaatccgt ggcgttctgc tcggggtcgg tgttatcggc ctcatgtcgc tgtcgttggc
      661 tgtccaacca acgaaaactc agatggagcc gggggcaagc gtggaaccgc cacacgctgt
      721 accgctccct cggttcaact caatcgtgtt ggatggcggc gccaaagccg tgatccaata
      781 tggatcgccg cagcgagtga cgatgctcaa gggcagtgaa gatctttcgc tcataacggt
      841 cacgcaggac cggctggtcg tcaacaaatg ccgcgacaag tgtccgcgag gatacgaact
      901 tcaagttgag atcgtgacgc cgctcatcaa tgcaattgcc gttaccaacg gcggcgtgat
      961 cgagagtcga ggtgatttcc cacttcaaac ggcaatgagt ctcgcagtca atcacggtgg
     1021 cacagttgac gcacggacaa tttcagccaa caacatcacg gctgcggtgg cccagggtgg
     1081 cagaattctc gcgaagcccg agacgacaat ggtcgcgagc gtttctaacg gcggcgtgat
     1141 tacttattgg ggcaatgccc aggtcatgtc gtcgaccgaa cacggaggag cgatcaccaa
     1201 aggggctgcc agcgatctga acaaaccgct gtctgatgtc gaagcaccgg tctcatgtcc
     1261 tacgactccc gcgccgcccg caccgcccgc tggtgcaaag cgttcgcgga caattgttat
     1321 ctagcgatgg gtgggtagtc ggcgcattcg taccttttgt aatgtttgcc gaaggggttg
     1381 agggatgaaa agatcaagat cgcttttgat cgcaaaccta accttggctc tttgcttagt
     1441 ggtttgcatt cgtgtggccg ctcagggcga cctcgtcaaa aacgatggca ttaccagtcc
     1501 gctccatcgg gcaaatgtcg gccggatagt ctttacagcc aatgctgtcc ccatcgaaag
     1561 cctcgcgcca gccgacttca taaacaccac tgaattacgg gaaaccgctg atttgagttt
     1621 gcgagttttc atggggaact cgctcacgaa ttatctgcat aagctccagc cgcacttgac
     1681 cgtcgaagaa cttaatcggc agggcagtta tcagttctct tttttcgtcg atgacgcgtt
     1741 agtccacgag gaaaacttga acccttattg ggtgcgagca gataccaaga tcaaactaac
     1801 gacccttggc ttcactcttc tcaattcggc cgaaccggac agcgccggcg cgggcaccag
     1861 gatttggaga ctgttcctta tgaacggcgg gcaacaggct ctgacggccg ggacgcaccg
     1921 gctaaagatt gagctccggc cgtacgtaaa aacctcggaa acaagagtcg gagatttgat
     1981 tgccaccggc gagatacaac tagtcgtccc ggctaaaccc aaggttgatg aaaaggtcgc
     2041 tgcgattcaa tcgatccggc cgaacagcgg ctggcaaatt tcgaaagctg cctacgatcg
     2101 cggcaagatt gaagagctca accgcatgat cgcggaaaat gtgtacaggg agatcacgag
     2161 cgtcgtcgtc atcaggggcg gcgggctatt gatcgaagaa tatttcaatg gtgcgacaag
     2221 agacacgctg cacaacaccc gctcagtcgg gaaatctttt gcttcaacca tcctgggcat
     2281 ggcgattcaa gacggtcaca tcaagagcga gaaccagagt ctcaaagact tctacgatct
     2341 caaaaagttt gccaactact ctcctaaaaa agagagcgtg acgattaaaa gcttgctgac
     2401 gatgagctca gccttcgacg gcaatgacga tgacgcaaat tctccgggca atgaagagaa
     2461 gatgtatcc
//
LOCUS       DATDBY010000460         2788 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2673861, whole genome shotgun sequence.
ACCESSION   DATDBY010000460 DATDBY010000000
VERSION     DATDBY010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2673861"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..830)
                     /locus_tag="VIT19_08590"
     CDS             complement(<1..830)
                     /locus_tag="VIT19_08590"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016888 - endodeoxyribonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HEY5839079.1"
                     /translation="MKKSPRIGFHAPIKGGLHESLIIAKETGCDAVQIFSRNPRGWMA
                     KPLTRESVELFKATRKVTKLSPVLIHANYLINLSSADDVILLKSIASFREEVQRGIVL
                     GADYVVVHPGSARGSCEADGIAATAISLRVACKGLRFGKLRILLENTAGQGQCIGHRF
                     EHLRAIMDACPKLPLGVCIDTAHSFTAGYDIREPDGLEATIEIIRRTVGLRKVYAVHF
                     NDSRAPFNSRVDRHWHIGEGHIGREALRRFAQHPKLAHCAFILETPYDDPRADLKNLE
                     A"
     gene            complement(906..2060)
                     /locus_tag="VIT19_08595"
     CDS             complement(906..2060)
                     /locus_tag="VIT19_08595"
                     /EC_number="3.4.13.19"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEY5839080.1"
                     /translation="MTTQTSANDPGAIHQRAITVDMHADTAQRLVDENVDLNERLADG
                     HLDAVRAREGGLDAQFFSIWVEPQLFGGGGAGAMKRADIQIEAVRNLAANHPETWEVA
                     TTADDVRRVAASGKIAALMGLEGGYAIDDKIENVKRYYDMGVRYMSPAWSVSTSWAGS
                     SGDAAGETRGLNELGKQVIGEMNRLGMMIDVSHVSDKTFWDIVNTSTKPVVATHSGCR
                     AIANVPRNLTDEMIRALAKTGGVVNVIFYPEHIEPGWSAKKKRVDAEIAPLVQRASEQ
                     EQGNVAQKKLARDRVRFEEYLKRLPPVYVSRIADHIDHIVKLVGVDHVGIGSDFDGVQ
                     AVPADMKSVADLPNLTNELLRRGYSASDVEKILGGNMLRVMDANAEARTK"
     gene            2483..>2788
                     /locus_tag="VIT19_08600"
     CDS             2483..>2788
                     /locus_tag="VIT19_08600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839081.1"
                     /translation="MGDKKKDVATPRICDLVWHDGEFIKWNDARVHVMSHVLHYGSSV
                     FEGIRCYATKRGPAVFRLREHMQRFLNSAKVFRMDHDWSVDDFCEAAVELVRRSGLDQ
                     "
BASE COUNT          580 a          835 c          760 g          613 t
ORIGIN      
        1 gcttccaggt tcttcaaatc tgcccgcgga tcgtcgtacg gagtctccaa aatgaaagca
       61 cagtgcgcga gcttagggtg ttgcgcgaag cggcgcagag cctcgcgacc gatgtggcct
      121 tcgccaatgt gccagtggcg atcgacacgc gagttaaacg gtgcgcgcga gtcattgaag
      181 tggaccgcgt acactttgcg caggccgacc gtgcgacgaa tgatttcaat cgtggcttct
      241 aacccgtctg gctcgcgaat gtcgtaaccg gccgtgaatg aatgcgcggt atcgatgcac
      301 acgccgagag gcagtttcgg acacgcgtcc atgatcgcgc gcagatgctc gaaccggtga
      361 ccgatgcatt ggccctgtcc ggcggtgttt tcgagaagga tgcgcagctt tccgaatcgc
      421 aatcctttac aagcaactct caaactaatc gcagtggctg cgatgccgtc agcttcgcac
      481 gagccgcggg cactacccgg atgaacaact acatagtcgg cgcccagcac aatgccgcgc
      541 tgcacttctt cgcgaaacga ggcgatcgat ttcaacagaa tcacatcgtc cgccgaagaa
      601 aggtttatta gatagttcgc gtgaattaag acgggcgaca gcttcgtgac cttgcgtgtc
      661 gccttgaaca gctcgaccga ttcgcgggtt agtggcttgg ccatccagcc gcgcgggttg
      721 cgcgagaaga tctggaccgc gtcgcaaccg gtttctttcg cgatgatgag cgactcatgc
      781 aatccgccct tgatcggcgc gtggaatcca atgcgaggag atttcttcat tgtggataat
      841 gaggcgcgca gtgcagaagc gcgcacgaag taagcgcgct cttcagcgat catcagaagc
      901 cgcgctcact tcgtgcgcgc ttctgcattg gcgtccatca cgcggagcat atttccgccc
      961 aagatcttct caacgtcgct ggccgaataa ccacggcgca gaagctcatt cgttagattc
     1021 ggcaagtccg ccaccgactt catgtccgcc ggcactgctt gcacaccgtc gaagtctgat
     1081 ccgatgccga cgtgatcgac gcccaccagc ttcacgatgt gatcgatgtg atcggcaatc
     1141 cgcgagacat acaccggcgg caggcgcttc agatactctt caaagcgcac gcgatcgcgg
     1201 gcgagtttct tttgcgcgac atttccctgc tcctgttccg aggcgcgctg aacgagcgga
     1261 gcgatctccg catcaactct tttcttcttc gcgctccagc cgggttcgat gtgctcggga
     1321 taaaagatga cgttcaccac accaccggtt tttgccagcg cgcgaatcat ttcgtccgtc
     1381 aggttacgcg ggacgttcgc gatggcgcgg caaccggaat gcgtcgccac caccggcttc
     1441 gtcgaagtgt tcacgatgtc ccagaacgtt ttgtcggaca cgtgcgacac atcgatcatc
     1501 atgccgagcc gattcatctc gccgatcacc tgtttgccca attcgtttaa gccgcgcgtc
     1561 tcaccggctg cgtcacccga agagcccgcc caactcgtgc tgacactcca tgcaggcgac
     1621 atgtagcgca cgcccatgtc gtaatagcgc ttcacattct cgatcttatc gtcgatcgca
     1681 tagccgcctt ccaatcccat caaggcggcg atttttccgc ttgcggcgac ccggcgaacg
     1741 tcatcagcgg tagtcgccac ttcccaggtc tcgggatgat tggcggcaag attccggacg
     1801 gcctcgatct gaatgtccgc gcgcttcatc gcgcccgcgc cgccgcctcc aaacagctgc
     1861 ggctcgaccc aaatcgaaaa gaactgcgcg tcgagcccgc cttccctggc ccgcaccgcg
     1921 tcaagatgtc cgtccgccaa ccgctcattc aaatcgacgt tctcatcgac caggcgttgg
     1981 gccgtgtcgg catgcatatc gacggtgatc gcgcgctgat gaatcgctcc ggggtcattt
     2041 gcacttgtct gtgttgtcat ctttccaggt tccacgtgtt cggttgaatt acggcagttt
     2101 gtgatcgcga ggagcgccag ggcacacagc cacaaggtga aagcccggcg cggaatcacg
     2161 acctgattgc ccttcttatt taatcgcaag ccgactcgat cctatttaac tgatgcgggt
     2221 tgagcaagcc agtgcgcaaa cgacgttttt ggagtgcggc ggcttgacgc cgctttgcct
     2281 gtcatcgtcc ctaaagctca ccacaataac aaagcgctgt cgagccggcg cactccaaaa
     2341 atcgccccaa aaaccatgaa tggctatctt gccaacggcc ttaactttag agtatcgtgc
     2401 tttctcaatt cacccagtaa taagcacttc ttgcggttcg aaaagcggta attctccaaa
     2461 ggagtaaaca ggcatgtatt caatgggcga taagaagaaa gatgttgcca ctccgcgtat
     2521 ttgtgacctg gtgtggcacg acggcgagtt catcaaatgg aatgacgcgc gcgtccatgt
     2581 aatgtcccac gttctgcatt atgggtcgag cgtcttcgaa ggcattcgct gttacgcgac
     2641 gaagcggggg ccggccgtct ttcgcctgcg cgaacacatg caacgcttct tgaattccgc
     2701 aaaagttttc cgcatggatc atgactggag cgtcgatgat ttctgcgaag ccgccgttga
     2761 actcgtgcgc cgcagcggtt tggaccag
//
LOCUS       DATDBY010000461         3168 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2951237, whole genome shotgun sequence.
ACCESSION   DATDBY010000461 DATDBY010000000
VERSION     DATDBY010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3168
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2951237"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..946
                     /gene="selD"
                     /locus_tag="VIT19_08605"
     CDS             <1..946
                     /gene="selD"
                     /locus_tag="VIT19_08605"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HEY5839082.1"
                     /translation="KQPNDPNLLVGFDKADDAGVYRLRDDLALVQTLDFFTPIVDDPF
                     DYGRIAALNSINDVWAMGGTPITAMAITCFPKKGVDFAILTEIMRGGLSVLTENKVAL
                     IGGHSVDNEQIMFGYSVTGVIDPNHVATNAGARPGDVIILTKPIGTGVISTGIKREKA
                     SPEIVAESVATMLTPGKYAAEAIAKFDVKGATDVTGFALLGHAWELARASNVTIEIDS
                     SRVPLINGALELVVAGMLTGADKTNREYVGEDVSFAGNLDPNLMKLFYDPQTAGGLLL
                     AIAEDRAEDLLAELRKNYSRAEVVGRVKERGKQAIVVE"
     gene            1063..2547
                     /locus_tag="VIT19_08610"
     CDS             1063..2547
                     /locus_tag="VIT19_08610"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ergothioneine biosynthesis protein EgtB"
                     /protein_id="HEY5839083.1"
                     /translation="MASTIQQLKSHPTTSIADLYRSVRARTLEIVAPLEIEDYVVQTA
                     EFMSPPRWHIGHTSWFFETVLRKYQTGYKPYSEDFLFFFNSYYEGFGERIERQKRGTR
                     SRPTVAETKKYRAGIDEQMARFIESVSDRDDAQEILSIVRLGLEHEMQHQELLVYDIK
                     HLLVDQFDAPMKTLPVSIETVTGMVEVEGGLFELGFSLPINGEGGGGVGAAESLPQPL
                     SARGEGSQSGAKPPHSKSFAWDNEKPQHKVFLQDFSIDRAPVSNGEYLEFMNSGGYKD
                     FRWWHSAGWEKVNTENWQAPLYWEQQRGEWMIRDFGGLHPATEKLNEPVSHVSFLEAS
                     AYAKWAGKRLPTEAEWEKAATVAEPVSVPRAVATGSRETSENSKRAFPWGDSPPVDSK
                     ANLFENGFWNVAPIGSFPEGQSAYGCQQLIGDVWEWTTSDYTPYPGFKSEFDEYNDKW
                     FVGQKVLRGGSFATPQIHIRSTYRNFFYPHERWMIAGFRCAKDK"
     gene            2860..>3168
                     /locus_tag="VIT19_08615"
     CDS             2860..>3168
                     /locus_tag="VIT19_08615"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY5839084.1"
                     /translation="MKTPRTIALLLTLCALAATACNRGASQPVTRTESTTSQIQPASL
                     VSDTSTNSGDVATTESPAEPTMLPGPNAVPKDTRIVVNIPAFRMDVFKDGVLVKSYKV
                     G"
BASE COUNT          714 a          846 c          935 g          673 t
ORIGIN      
        1 gaaacaaccc aacgatccga atctgctggt cggtttcgac aaagcggacg acgccggagt
       61 gtatcgtctg cgcgacgatc tggcgctggt gcagacgctc gatttcttca cgccgattgt
      121 ggatgacccg ttcgattacg gccgcatcgc cgcgctgaat tcgatcaatg atgtgtgggc
      181 catgggcgga accccaataa cggcgatggc gatcacctgc tttccaaaaa agggcgtgga
      241 cttcgcgatt ctaactgaga tcatgcgcgg cggtttgtcg gttttgactg agaacaaggt
      301 cgcgctcatc ggcggtcaca gcgtcgataa cgagcagatc atgttcggct attcagtcac
      361 cggcgtgatc gatccgaatc atgtggcgac gaatgccggc gcgcggccgg gtgacgtgat
      421 tattctgacg aaaccgatcg gtaccggcgt gatctcgact ggaatcaaac gtgagaaggc
      481 ttcgccggaa atcgtcgcag aatcagttgc gacaatgttg acgccgggca agtacgccgc
      541 ggaagcgatt gccaaattcg acgttaaggg cgcgactgat gtcaccgggt tcgctttgct
      601 tggtcacgcg tgggagttgg cgcgcgcgag caacgtaact atcgagattg attccagtcg
      661 cgtgcctttg atcaatggcg cgctggaatt ggttgtcgcg ggaatgctga ccggcgcgga
      721 caaaacaaac cgtgagtatg tgggcgaaga cgtttcgttc gccggcaatc tcgatccgaa
      781 tctgatgaag ttgttttatg atcctcagac ggcaggtgga ttgttgctgg cgattgcgga
      841 agacagggcg gaagatttgc tagccgagtt gcggaagaac tattcgcggg ccgaagttgt
      901 tgggcgagtg aaagaacgcg gtaagcaagc aatcgttgtt gagtaggccc gcacgatggg
      961 ctaccctctg ccgctcgcga tcgcgagctc gttggatgct gcctctttgg ttgatgctgg
     1021 ctcggcccga tattattaag acgagccggt gaaataatga taatggcttc cacgattcaa
     1081 caactcaaaa gtcatccaac gacctcgatt gccgatctct accgctccgt gcgcgcgcgc
     1141 acgttggaaa tcgtcgcgcc gctggagatt gaagactacg tagttcaaac cgctgaattc
     1201 atgagcccgc cgcgctggca catcggccac acgtcctggt tttttgaaac cgtcctgcgg
     1261 aagtatcaga cgggatacaa accctactcg gaagattttc tattcttctt caattcctac
     1321 tacgaagggt ttggcgagcg gatcgaacgt caaaagcgcg gcactcgttc gcggccgact
     1381 gtagctgaga cgaaaaagta tcgcgcgggc attgacgagc aaatggcgcg cttcatcgaa
     1441 agcgtctcgg accgcgatga tgcgcaggaa attctgtcga ttgtgcgtct cggcctcgag
     1501 cacgagatgc agcatcagga gctgctggtc tatgacatca agcatctgct cgtcgatcag
     1561 ttcgacgcgc cgatgaaaac tttaccggta tcaatcgaaa ccgtgaccgg gatggttgaa
     1621 gttgaaggtg gcttattcga gttaggattc tccctcccca taaatgggga gggtgggggt
     1681 ggggttggcg cggcggaatc tctcccccaa cccctctccg cgcgcggaga ggggagtcaa
     1741 agcggcgcca agccgccgca ctccaaatcg tttgcctggg acaacgagaa gcctcagcac
     1801 aaagttttcc tgcaggactt ctcgatcgat cgcgcgccgg tcagcaatgg cgagtatctc
     1861 gaattcatga actctggcgg ctacaaagac tttcgctggt ggcactcggc cggttgggaa
     1921 aaagtgaaca ccgaaaactg gcaggccccg ctttactggg agcagcagag gggtgaatgg
     1981 atgattcgag attttggcgg acttcatcca gccacagaga aactgaatga accggtttcg
     2041 cacgtcagct ttttagaggc ttcggcttat gcgaagtggg ctggcaaacg tctgccgacg
     2101 gaagcggagt gggaaaaggc cgcaaccgta gcggaacctg tgtcagtacc gcgagcggta
     2161 gcgaccggat cacgagaaac ttccgagaat tcaaagcgcg cgttcccctg gggcgattcg
     2221 ccccctgtcg actcgaaagc aaatctgttc gaaaatggat tctggaacgt ggccccgatc
     2281 ggctctttcc ctgaagggca aagcgcgtac ggttgtcagc agttgattgg cgacgtttgg
     2341 gagtggacga cttcagatta cacgccgtat cccggcttca aatccgaatt cgacgaatac
     2401 aatgacaagt ggtttgtcgg tcagaaggtt ctgcgcggcg gctcgttcgc cacgccgcag
     2461 attcacattc gctcgacgta tcgaaacttt ttctatccgc acgaacgctg gatgattgcg
     2521 ggatttaggt gtgcaaaaga taaatagatc ggttttttga cccacccgct tgcttcgcac
     2581 cctcacctca atcctctccc agagagagag gaggaatagc aggtggtaca gacctctctg
     2641 ggagcgcggg catcctgccc gccgtatctg tcgcgaagcc acagactaag tctatgcgac
     2701 tgcgcaaaag acgcgtaaca ttccgtctcg gttctgcgct ggtcgatagc gagattcagc
     2761 gaactgtagc cacagcgcca cccgatgtgg gccgccacag atggtggcgt ggaagcagcg
     2821 gtaaccgaag tatcttagac gagctttaat acccccaaca tgaaaacgcc ccgcacaatc
     2881 gccctactac tgaccctctg cgcgctggcc gcgaccgctt gtaatcgcgg tgcttcgcag
     2941 ccggtcacgc gcaccgagtc aacgactagt cagattcaac cggcgtcgct ggtgagcgac
     3001 acgtcaacta atagcggcga tgtcgcgacc accgaatctc cggcggagcc aacgatgctt
     3061 ccggggccga acgcggtccc gaaagacacc cgcattgtcg tcaacattcc ggctttccgt
     3121 atggacgtgt tcaaagacgg cgtgctggtg aagtcttaca aagtcggc
//
LOCUS       DATDBY010000462         8874 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1677457, whole genome shotgun sequence.
ACCESSION   DATDBY010000462 DATDBY010000000
VERSION     DATDBY010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8874
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1677457"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            189..3206
                     /locus_tag="VIT19_08620"
     CDS             189..3206
                     /locus_tag="VIT19_08620"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HEY5839085.1"
                     /translation="MNRRRISISLGASLLFITAAALTAHAQANYTRDPNQPTDEEYTR
                     KIAEYTTEKFFNSPLTDYLPTSPNVPTPKAVLGDVAGAPGKLPYSEEVYRYMRMLEKA
                     SPRVKVFSIGTTEEGREMIAVAIASESLLARLDENRARLNKLADPRTINLNDADADRL
                     VADTFPIYYITGTIHSTETGSPTALMELAYRLAVDESPYIKAIRDGMVTLITPVVEVD
                     GRDRMVDVYNWHLANPGKNWPNLLYWGRYVAHDNNRDAMGLSLKLTRNVLNTYLTWKP
                     QVLHDLHESVPYLYDNTIGDGPYNAWIDPILTDEWQMIGWQNVSEMTKFGMPGVFAHG
                     TFDTWSPGYLMFIAATHNGISRLYETFGNAGADTLVRTLSPSDYERTWYKQNPPLPRA
                     RWSQRNNNNYQQTALLISLDNFNRNGKLFLKNFYLKSKRSVEKPKNEGPAAYVFPGDD
                     PRPGNQANILRVLQAQGCEVHRATAPFTVTMKKKPTRVGPRPTASSSPSPSPAKTDDT
                     ESRTFPAGSYLVRMDQPYSRIADALLDYQYWSPRDPQQNVYDDTGWTFGELGNIQVVR
                     VTDAKALNAPMERVTGEVRSAGGVTGNGSIYLVNANADNSLITLRYRLRRASFDAAEE
                     PFEAAGRKFSRGSFIIRNAAADEVNKATSELGIQAFAIATAPTVKTHPVKAARVAIMH
                     TWLSTQDEGWWRLAFDQMGVPFDYISTQDVAKDSDLNKKYDVIIFGPGGGNVNAVIQG
                     RPMYGNPIPWKTTSLTPNIGKIDSTDDIRPGLGLTGVLNLQNFVKNGGVFIGTDDSAD
                     FAVSTGFTPGVTIQRSTRLRAIGIVAKTRMVDSSSPIAYGYGDALSVYTFNGPIFNIS
                     NVAGGGGGRRAGGGQRATGRGTVDDPDVVQGRPPAELPEPPPPVEVWEAAPVPEEQRR
                     NLIGLIPPAQRPRVILRWGNTNELLVSGLLDGGDELAQHGAVIDSPLEKGHVILFSNN
                     PMWRGQTMGSYSLVFNVILNFDNLNAGRKLEEK"
     gene            complement(3247..4023)
                     /locus_tag="VIT19_08625"
     CDS             complement(3247..4023)
                     /locus_tag="VIT19_08625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839086.1"
                     /translation="MCISQDLDRGIHWISINTGASRALLIALLIAEAKDEAAKKGTRE
                     ILRYWPSLSRGPSIWSIARRLWRDWKRHWFDALAASLILFVVIGVVLRVTQIDKGAVQ
                     YVAAKPGISLPPFHQVSDEDVEMKSAPGAKGSFIRLDQVRGRYTLVAVPANGLLHANQ
                     LLSPQLSKGMQNHTTITVPLKPTTARPTLTAPAEAVLILSPRDHNLKSAEPVIFGVIV
                     LHIDTAGESKLATIALPHDKLATVAPLLASHDVFLSEPIR"
     gene            complement(4156..4512)
                     /locus_tag="VIT19_08630"
     CDS             complement(4156..4512)
                     /locus_tag="VIT19_08630"
                     /inference="COORDINATES: protein motif:HMM:NF012442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEY5839087.1"
                     /translation="MTQSEVINYVAERTSLNRAQAKQFFEDLASLAVSEVTSGGEFVL
                     PGFGKLVRAERKAREGRNPATGETIQIPAKTTLKFRVSKAAKTAALGGDPFTLPEADA
                     DTAADELGGDPVVLPD"
     gene            complement(5176..6630)
                     /locus_tag="VIT19_08635"
     CDS             complement(5176..6630)
                     /locus_tag="VIT19_08635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839088.1"
                     /translation="MTSILSSISGYFSKSLILGTVLPVVIFMVLGMLFLVPLLPVDMI
                     SLARLEGIDKQWKVIAASFIAIVLSGLMYNLNIPILRWYEGYPWRYSWIGQWLTSRHE
                     RRFESMQNRANAIRATRQVMEQTDKNFSEQLWIKEFFEDLKELRAPRIGPLEHKWEEI
                     WKTAPLKERLSSDQRQWRILLAGLRSQHGQYLRELGANYPDSKSLILPTHLGNVIRSF
                     EYYSSREYGIDSIVMWPRMVAIIPKEYAIVMDDAKTTFDFMLNCSVLSFVLALSMLLT
                     GMFYPHQLASGVQVRYWLIEIAIFAASSYFFYRLSINRVGAWGSFVKGTFDLFRADLL
                     KKLGYEQKPTGRLEERKLWGEISRQILYGDRYDKTMLPYSSEAAASYPSARGVPGYAK
                     LEITRGVKTNPDTEAITVYLRVKNTDLSLADANVVVTEKLSDEYDYEWDSANVGGAAV
                     RVSGKNPYQFTLGHLLPASEIVLQYNAIHRKKGS"
     gene            6937..>8874
                     /locus_tag="VIT19_08640"
     CDS             6937..>8874
                     /locus_tag="VIT19_08640"
                     /inference="COORDINATES: protein motif:HMM:NF027637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HEY5839089.1"
                     /translation="MKHLILLVSVFLLISPNIIAQGRTNPDAAKTPIITEKVAGMQKY
                     AGFFPFYWDAKAGKVWLEIDKWNSEFLYVEALPAGIGSNDIGLDRGQLGDSYIVRFER
                     TGPRVLLIAPNQSYRAISNNADERRSIREAFAESTLWGFEVAAEEGDRVLVDATAFYL
                     RDHHGIPGTLQRLQQGQFRLDASRSAFFLPNTKNFPKNTEVEVTLTFTTDGEPGGLVR
                     SVTPNPQAITVRERVSFVELPPPGFKPRENDPRAGYFGIQYMDFATPITDVITKRYIS
                     RHRLQKKNPSATVSEAVEPIVYYVDRGAPEPVRTALIEGASWWSQAFEAAGYRNAYRV
                     EVMPADADPMDVRYNVIQWVHRSTRGWSYGNALEDPRTGEIIQGRVSLGSLRDRQDFL
                     IAQGLIAPYGKDKSVVGKILEQVVLARLRQLSAHEVGHTLGLQHNFAASINNRASVMD
                     YPAPFVKLGADGSPDISEAYAKGIGEWDKVAIAYGYQDYPAGTDEKAALDKVLSDAFN
                     RGLMYLTDQDARPGGASTSVAHLWDNGTNVIDGLANIVRVRDVALHRLGENNIREGAP
                     LATLEDVLVPLYMGHRYQVEAVTKLIGGEDYSFSLRGKGDRNPQIIPPAEQKRALSAV
                     LETLKPHNLKLPESLLRLIPPR"
BASE COUNT         1966 a         2449 c         2493 g         1966 t
ORIGIN      
        1 gattcgtttc ataaatcgcc gtggagacag attcagcgtc caacaagatt ctaggtagcg
       61 caattcactt ttgcaaagcg catcgggata attgacttac cctcacgttt agcttaaaag
      121 catcttcttc tcttcaattc gatcagttct caaaagcttt catgtcgcag agccttcaag
      181 gagtccaaat gaaccgtaga cgcatcagca tctcgttggg cgcaagcctt ctcttcatca
      241 ccgccgcggc gttgacggcg cacgcacagg ccaactacac gcgcgacccg aaccagccga
      301 cggacgagga atacacgcgc aagatcgccg aatatacgac cgaaaagttt ttcaactcgc
      361 cgctgaccga ttatttgccg acgtcgccga acgtgccgac tccgaaagcg gtcctcggcg
      421 atgtcgctgg tgcgccgggg aaattgccgt actcagaaga ggtctatcgc tacatgcgca
      481 tgctcgagaa agcgagcccg cgggtgaagg tgttttcgat cggcacgacc gaagaaggac
      541 gcgagatgat cgccgtcgcg attgcctctg agtcgctgct ggcgaggctc gacgagaatc
      601 gcgcgcggct gaacaagctg gctgatccgc gcacgatcaa cttgaacgat gctgatgctg
      661 atcgactggt ggcggatacg tttccgattt actacatcac cggcacgatc cactcgaccg
      721 aaaccggttc gccaaccgcg ctgatggaac tggcttatcg tcttgctgtc gatgaaagtc
      781 cttatatcaa agccattcgc gacggaatgg tgacgctgat cacgccggtc gtcgaggtcg
      841 atggccgcga tcgcatggtc gatgtttaca actggcatct cgcgaacccg ggaaagaact
      901 ggccgaacct gctgtattgg ggtcgttacg tggcgcacga caacaatcgc gacgcgatgg
      961 gtttgtcact gaaactgacg cgcaatgtgc tcaataccta cctcacatgg aagccgcagg
     1021 tgctgcacga tctgcacgag tcggttcctt atctctacga caacacgatt ggtgacgggc
     1081 cgtacaacgc ctggatcgat ccgatcctga cggatgagtg gcagatgatt ggctggcaga
     1141 acgtttccga gatgacgaag ttcggcatgc ccggagtgtt tgcgcacggc acgttcgaca
     1201 cctggtcgcc cggatatctc atgttcattg cggcgacgca caacggcatc agccgtctgt
     1261 atgaaacttt cggcaacgca ggcgctgata ccttggtgcg cacactgtcg cccagcgact
     1321 acgaacggac ctggtacaaa cagaatccgc cgctgccacg cgcgcgttgg tcgcagcgta
     1381 acaacaacaa ttaccaacag acggcgctgc tcatctcgct ggataacttc aaccgaaacg
     1441 gcaaactgtt tcttaagaac ttctacttga aatcgaagcg ttcggtcgaa aagccgaaga
     1501 acgaaggacc ggcggcctac gtcttcccgg gcgatgaccc gcggcccggc aatcaagcga
     1561 acatcctgcg agtgctccag gcacagggct gtgaagttca tcgcgcgact gcgccgttca
     1621 cggtgacgat gaagaagaag ccgactcgcg ttggtccgcg gccaaccgcc agcagttcgc
     1681 cttcgccgtc tccagccaaa acggacgata ccgaatcgcg cacattcccg gccggcagtt
     1741 atctcgtgcg gatggaccag ccgtatagtc gcatcgctga cgcattgctc gactatcaat
     1801 attggagtcc gcgcgatccg caacagaatg tttacgatga caccggctgg acgttcggcg
     1861 aactcgggaa cattcaggtc gtgcgcgtga ctgacgcaaa agccctaaac gcgccgatgg
     1921 agcgcgtcac cggtgaagtg cgttcggccg gcggggtgac gggcaacgga tcgatttacc
     1981 tcgtgaatgc aaacgctgac aacagtctga ttacgttgcg ttatcgcctg cgcagagctt
     2041 cgttcgacgc cgcggaagag cccttcgaag cggcgggaag gaagtttagt cgcggctcgt
     2101 tcatcattcg taatgctgcg gcggatgaag ttaacaaagc tacgtccgaa ctcgggattc
     2161 aagcgttcgc catcgccacc gcgccgaccg tgaagactca tccggtgaaa gccgcacgcg
     2221 tagcgatcat gcacacatgg ttaagtactc aggatgaagg ctggtggcgg ctggcgtttg
     2281 accagatggg agtgccgttc gattacatca gtacgcagga cgtggcgaag gacagcgacc
     2341 tgaacaagaa atacgacgtg attatctttg ggccgggcgg cggtaacgtc aatgcggtca
     2401 ttcaaggccg gcctatgtac gggaatccga tcccctggaa aaccacttca ttgacgccca
     2461 acatcggcaa aatcgattcg accgatgaca ttcgtcccgg ccttggctta accggcgtct
     2521 tgaaccttca gaattttgtg aagaacggcg gcgtgttcat tggcactgac gattcagcgg
     2581 acttcgctgt gtccacgggt tttacgcccg gggtcacgat tcagcgaagc acgcgtctgc
     2641 gcgccatcgg catcgtggcc aagacgcgga tggttgattc gtcgagtccg attgcctatg
     2701 gctatggcga cgcactgtcc gtttatacct tcaacggtcc catcttcaac atcagcaatg
     2761 ttgcaggcgg aggcggcggc cgtcgcgctg gcggaggcca acgcgccacg ggccgtggca
     2821 ctgtcgatga tccggacgtt gttcaaggcc ggccgcccgc ggaactgcct gagccaccgc
     2881 cgcccgtcga agtttgggaa gcggccccgg ttccggaaga gcagcgacgg aatctaattg
     2941 gattgattcc gccggcacaa cgtccgcgcg tgattcttcg ttggggcaac acgaacgaac
     3001 tgctcgtttc aggactgctg gacggcggcg acgaacttgc gcaacatggc gccgtgatcg
     3061 attcgccgct cgagaagggc cacgtcattc tcttctcaaa caacccaatg tggcggggac
     3121 agacgatggg cagttattcg ctcgtcttca acgtaattct gaatttcgat aatttgaatg
     3181 cgggaagaaa attggaagaa aagtagctcc ccgaaaacta accttgattg cgttcttgat
     3241 tttactctac cggataggct cggaaagaaa gacatcgtgc gaggcgagga gaggagccac
     3301 agtcgcgagt ttgtcgtgcg gcagggcgat tgtggctaac tttgactcgc ctgcagtgtc
     3361 gatgtgcagg acaataacgc cgaagattac cggctcggcg gatttcaagt tgtggtcccg
     3421 cggggacagg atcaacacgg cttcagcagg cgccgtcagc gtcggacgcg cggtagttgg
     3481 cttgagcgga acggttatcg ttgtgtggtt ctgcatcccc tttgaaagtt gaggactaag
     3541 tagttggttt gcatgcaaca atccattcgc gggcacagcg accagagtgt aacgaccacg
     3601 cacttgatcg agtcggatga aagatccctt cgcgccgggc gcgctcttca tttcgacatc
     3661 ctcatcgctg acttgatgaa agggcggcaa actgattcct ggcttagcag ccacatactg
     3721 gaccgctcct ttatcaatct gcgtgacgcg cagcaccaca ccgattacaa caaataagat
     3781 aagtgatgcc gcgagtgcat cgaaccaatg tcttttccag tcacgccaga gacgcctggc
     3841 tattgaccat atggaaggac ccctgctgag cgaaggccaa tagcgcagga tctctcttgt
     3901 gccttttttc gcggcttcat ccttagcttc ggcaatcagt agagctatca gcagggcccg
     3961 cgatgcgccg gtgtttatcg agatccaatg aatgccccga tccagatcct ggctgatgca
     4021 cattctgagg tcgtcaagcg ttcttatgcc gcgacagccc aacagagcgg cggtctcatt
     4081 tatttttctc cgcgtaatag atgcaggcac agttattctc agatcacatc cggttcgtcg
     4141 tgaaggaaaa gggcactaat ccggaagtac gacaggatcc cctcccaact cgtctgcagc
     4201 agtgtcggca tccgcttccg gaagtgtaaa aggatcccct cccaacgctg cggtcttggc
     4261 ggccttgctc acgcgaaact taagagtagt ctttgccgga atttgaattg tttcgcccgt
     4321 tgccgggttt cggccttcgc gcgccttacg ttcggctcga accagtttgc cgaatccggg
     4381 gagcacaaat tctccgcctg acgtaacttc actgaccgcc aggcttgcca gatcttcaaa
     4441 aaactgtttg gcctgcgccc ggttcaaact ggttctttcg gctacatagt taatgacttc
     4501 tgattgagtc atgcgctttt tgcgtgtgcc tcgtgaagac atagcagttt tatcctccaa
     4561 tcaaatcgat aaccaaggaa ctacccgtct cagtcaggat ccaaggtgct gtccccgccc
     4621 agtgcaggcg gatcgtgtgg aactggaaca ggcggcgcat tgtgtggagc cggcaaatgc
     4681 ggcggaaaac cgcccggcgg tattcctgct gggcgaagcg gcggtctctc gctggcgcga
     4741 tccttgtcac cttgttggcc tccgcctccg tcagggatta agtcatccga ttctctgtct
     4801 ttcggtgacc caggctcgtg agggtctctt tgattttgct cagacatttg aaaactccct
     4861 tctcaagtac cggcgtgttg gatgcgtgca ctgccagtgg ccttggatcc gcgaactcag
     4921 tcgggatcta caatgttgtc cccagcgagc tcggcttctt ggggagattt tccgacgccg
     4981 cgatcggggc tggcgccacc gccgcggtca gggcttggtc caccgcgtct gcgacggtca
     5041 tcgtcattcc gacacttgtc cgcgtcacta tcattttccg gttcgggcgg atcttcttca
     5101 ttcttgcgat ttgacatagc agaacacctc tttaagttga cgttcggtct tctcggtgcg
     5161 cttcgattac cggaatcaag aacctttctt tcggtgaatc gcgttgtatt ggagaacaat
     5221 ctcgctggcg ggcaagaggt gtccaagtgt gaattgatac gggttttttc ccgacacacg
     5281 cacagcggcg ccacccacat tggctgagtc ccattcgtag tcgtattcat cggagagttt
     5341 ctcggttacg acaacattcg catctgcgag actcaaatcc gtattcttga cccgcaagta
     5401 gactgtgatc gcttccgtgt cagggtttgt ctttacgcct cgggtaattt ccaacttggc
     5461 atacccggga acgccgcgcg cgctcggata cgaagccgca gcctcggaag aatagggcag
     5521 cattgtttta tcgtaacgat ctccataaag gatttgccgt gaaatctcgc cccacagttt
     5581 acgttcctcg aggcggccgg tcggcttttg ttcataacca agtttcttca gcaggtccgc
     5641 tcgaaataga tcgaatgtgc ccttaacgaa gctaccccac gctcccacgc ggttgattga
     5701 aagacgatag aagaagtatg acgacgctgc gaagatcgcg atctcgatca gccagtagcg
     5761 cacttggacc ccggaagcca actggtgcgg atagaacatg ccagtcagca acattgaaag
     5821 ggccaacacg aagctgagaa ccgaacaatt gagcatgaaa tcaaaagtgg tcttcgcatc
     5881 gtccattacg attgcatatt ccttgggaat gattgcgacc atgcgtggcc acatcacgat
     5941 ggaatcgatg ccgtattcac gactcgagta gtattcaaag ctgcggataa cgtttccgag
     6001 atgcgtaggg aggatcagac ttttgctgtc gggataattt gcacctagtt ctcgtagata
     6061 ttgcccgtgc tgacttcgca gccccgccag aagaatcctc cactgtcgtt gatcgctact
     6121 cagtctttct ttcagtggag cggtcttcca gatttcctcc cacttatgct ccaggggacc
     6181 gatacgcgga gcgcgaagct ctttcaaatc ctcaaagaac tctttgatcc acagctgctc
     6241 tgaaaagttc ttgtcggtct gctccatcac ttgccgagtt gcacggatgg cgttggcccg
     6301 attctgcatc gactcaaagc gtctctcatg gcgcgatgtg agccattggc caatccagga
     6361 atatcgccat ggatatcctt cataccatcg caaaatggga atgttgaggt tgtacatcaa
     6421 accgctgagc acgatcgcga taaacgacgc ggcgattact ttccactgct tgtcgattcc
     6481 ttcgagtcgg gccagtgaga tcatgtcaac gggcaacagg ggaacgagga aaagcattcc
     6541 caagaccatg aagataacaa ctggtaggac cgtgcccagg atcagggact tgctgaagta
     6601 accggaaatt gaagagagaa tggaagtcac caaacttctc cgtgggtata tcttacgttg
     6661 ccttttctaa ggtacacgga agagggccga ttcgtgtttc gccggcgcgg gcccaacctg
     6721 cgtgcgcttt gacttgcgag gcgcgcgaat gatagtaaaa gcaccgcttt gcgtcaatag
     6781 aattaagcgg gccgtcacgc gatagccgac gggatagact cagttgtgat actggaactc
     6841 tcgctcagta ccggcaagga aaaggactat ctgcggtttc aacgtgcttt gccggtatcc
     6901 tttgctttca aaaaatcgat tctctcgagg aaaagcatga agcatctcat cctacttgtc
     6961 tcagttttct tactcatcag cccgaacatt atcgcgcaag ggcgaactaa cccggatgct
     7021 gctaaaacgc cgatcatcac cgagaaagtg gccggcatgc agaagtacgc cggcttcttt
     7081 ccgttttatt gggacgcgaa agccggcaaa gtctggctgg agatcgacaa gtggaattcc
     7141 gagttcctct acgttgaagc tctcccggcg ggaatcggat cgaatgacat cggtctggat
     7201 cgcggccaat tgggtgacag ttacatcgtg cgttttgagc gcaccggccc gcgcgtgttg
     7261 ctgattgccc ccaaccaaag ttatcgcgcg attagtaata acgccgatga gcgacgttcg
     7321 attagagagg cgttcgcgga atcgaccttg tggggatttg aagtcgcggc tgaagaaggc
     7381 gaccgcgttc tggttgacgc caccgcgttc tatctgcgcg accatcacgg aattccgggc
     7441 acgctgcaac gtctgcaaca ggggcagttt cgtttggacg cttcgcgctc agccttcttt
     7501 ttgcccaaca caaagaactt tcccaagaac accgaagtcg aagtcacgct gacgtttacg
     7561 acggacggcg agcccggcgg cctggttcgc tcagtcacgc cgaatcccca ggcgatcaca
     7621 gttcgcgaac gcgtctcgtt cgtcgaattg ccgccgccgg gattcaaacc gcgcgaaaac
     7681 gatccgcgcg cgggctactt cggaattcag tacatggatt tcgcgacgcc gatcacggac
     7741 gtgatcacga agcgctacat ctcgcgtcat cggctgcaga agaagaatcc gtcagcaaca
     7801 gtcagcgagg cggtcgagcc gatcgtttac tacgtcgatc ggggcgcgcc tgagccggtg
     7861 cgcacggctt tgatcgaagg ggccagttgg tggagccagg cgtttgaagc ggccggttat
     7921 cgaaacgcat atcgcgtcga agtcatgccg gccgacgccg atccgatgga cgtgcgttac
     7981 aacgtgattc agtgggtgca tcgctcgaca cgcggctggt cgtatgggaa tgcgctcgaa
     8041 gatccgcgca cgggcgagat tattcaggga cgcgtgtcgc tgggttcgtt gcgcgatcgg
     8101 caggactttc tgattgcgca aggtctgatt gccccttacg gcaaagacaa atccgtggtt
     8161 gggaagattc ttgagcaggt agtgctcgct cgcctgcgac agctttcggc gcatgaagtt
     8221 ggtcatacgc tcgggctgca acacaacttc gctgcgagca tcaacaatcg cgcatcggta
     8281 atggattacc cggctccgtt tgtgaagctg ggcgcggacg gctcgcccga catctcggaa
     8341 gcatacgcga agggaatcgg cgaatgggac aaggtggcga tcgcctacgg ctatcaggac
     8401 tatcccgcgg gcactgacga aaaggcggcg ctcgacaaag ttttgagcga cgcgtttaac
     8461 cgcggcttga tgtacttgac cgatcaggat gcgcgtcctg gtggcgcatc gacttcggtc
     8521 gcgcatcttt gggacaacgg cacgaacgtg atcgatggat tggccaacat cgtgcgggtc
     8581 agggatgtgg cgctccatcg cctgggcgag aacaacatcc gcgaaggcgc gccgctcgcg
     8641 acactcgaag acgttctggt gccgctctac atggggcatc gctatcaagt cgaagccgtc
     8701 acgaaactga ttggcggcga ggattatagt ttcagcctgc gcggcaaagg cgatcgcaat
     8761 ccgcaaatta ttccgcccgc tgagcagaaa cgagccttga gtgcggtgct cgagactttg
     8821 aagccacata atctcaagct tcccgagtcg ttgttgcgtt tgattccgcc gcgg
//
LOCUS       DATDBY010000463         7706 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2286784, whole genome shotgun sequence.
ACCESSION   DATDBY010000463 DATDBY010000000
VERSION     DATDBY010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 7706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7706
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2286784"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(185..5035)
                     /locus_tag="VIT19_08645"
     CDS             complement(185..5035)
                     /locus_tag="VIT19_08645"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY5839090.1"
                     /translation="MQQLNPTTAGNRFSIKLFILACVFTGAALAWLSWSTYRFYGEDS
                     VIKGQIWRTEELHGIIVDLDEVLTMSARMAAATGEPQWEARYRKFEPQLDKAFKEILK
                     LAPSERLVQTDAANMRLVEMENHAFTLVRDGRTAEARAILSSQQYEKQKGIYALGMTS
                     FLDQLQVQLEATQRSQRRRAVFSAGAGVAVLAILLFTWLAIIRRMYKSHALLLSSIAS
                     REETEKALRKAQRELEERVRERTSELTIANTSLTEQVSERTRVEAALRRGEERYRDLF
                     ENANDIIYTHDLSGNYTSVNKACERIVGYTKQEALGMNLTQVIAPEYLEEASQLLARK
                     TRATPSPYELEIMAKDGRRIMLEVTSRLTYEDGKPTGVQGMARDITDRRRAKAELQAI
                     GEIVQSVITTANLDELFKLAHQAINKILSAENCFIALHNLSTDQIHYEYWVDQFDPVP
                     SPHPVDKGLCSYMLRTGQPLLLKEGFGSQIDEANETELSGTDAPSWMGVPLRTNSRTI
                     GVLVVQDYEQEHTYSQRDTAFLSSVGDQLGLAIERKRIDIELKTNERQLTAAQQIAHI
                     GNWEWDVVKKNLHWSDELFRIFGLQPGEFGPSVAEFFAQVHPEDIKLVKRAITKALRH
                     GVIPSFNFRIVQKDQAVRVLQITGEVGADETGRLTSLWGTIQDITERMQGENALRQSE
                     EKYRELIENAGDIIYTMDSTGRFTSFNKAGERITGYTREEALRMNIADVIRPEDAELV
                     RARLATKLSGGSLPDLELEIFVKGGGSVTIDISSRLIFQDGVVVGIQGIGRDMTERRR
                     AEAERQIISDIVQGVITTANLDELLQLTHRSLRKLIYAENCFVTLYDPKTSLMHFEFW
                     ADKFDPVPEPMPVGAGFSSYVLRTGQPILLTEAAKQRMSEQGIRMSGTDSASWLGVPL
                     RTPAGVIGVLVVQNYETESAYTERDLEFLSAVGNQIALAIERKRGERELEEARDAALE
                     SARLKSEFLANMSHEIRTPMNGVIGMTGLLLDTQLDEDQRDFAETIRGSSDALLTIIN
                     DILDFSKIEAGKLEFETVDFDLRNAVEETIDVFAERARGKQLEFASLIYHDVPTALRG
                     DPGRLRQVLTNLIGNALKFTERGEVIVRGEKESESDTEVSIRFSISDTGIGISREAEN
                     RLFRAFTQADGSTTRRYGGTGLGLSISKQLVELMGGKIGVTSKPGEGSTFWFTAKLEK
                     QLTVMAPPSPELESLEKLRVLIVDDNATNRKILSHQIGSWGMTHAAADSGPAAIELLR
                     AAAADGAAYNLVILDLLMPDMDGFELARTIKSDPAIAAARLILLTSSGVRGDGARAQA
                     AGVAAYLTKPIRQSQLFDCLTTLVSKSSAASVPVTTLVTRHTLREAKHMSDKLILLAE
                     DNIVNQKVAVRQLQKLGYRADAVANGREAIEALSRIAYDLVLMDCQMPEMDGYEASTE
                     IRRLEGTRKHTPIIAMTAHALSGDREKSLAAGMDDHITKPVDRAQLSRVLERFLASAA
                     NAEPAVDLPVDLDRLHQAMGEDPEEVLEILNLYLSGMEGNLIKLDLAISSGNTSEVDL
                     IAHNCGGTSANCGMVAVVDHFRELERMGRENELTGAARVTEQVGIEFARIKVFLAERF
                     APVAAQ"
     gene            complement(5121..6308)
                     /locus_tag="VIT19_08650"
     CDS             complement(5121..6308)
                     /locus_tag="VIT19_08650"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY5839091.1"
                     /translation="MFSDESKSDAATLLLGADTILQSRYQVVRHLGKGGMGAVYEAID
                     LRLGHTVALKQTLTSDPQMWKQFEREARLMAGLNHFVLPRVSDYFTEGNRAFLVMQFV
                     EGADLAEMIAQQPGPFPRNAVVAWADQLLDALIYLHAHERQIIHRDIKPHNLKITPEG
                     HIVLLDFGLAKSQSHNSDSGISCTSVYGYTPRYAPLEQIQDLGTSPQSDIYALGATLY
                     HLLTGIKPPDALARAAALVSARPNPLKPANEVNSVVGPELAGILDCAMAQNPDERYAS
                     AGEFREALRRVGRIDETTSTSVTPDHYDDYTFVAVPGEIEVSIHPISSNQRLGPRALA
                     SLFIILISAFGVFCNYYPWRMPPTAAQEQVKAIAGETGDTPIVEEKSPRTKPRRQVRN
                     TAD"
     gene            complement(6740..>7706)
                     /locus_tag="VIT19_08655"
     CDS             complement(6740..>7706)
                     /locus_tag="VIT19_08655"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY5839092.1"
                     /translation="NLIGRSQVFIEVMKQVGRVAATNLPVLLTGESGTGKELIAAAIH
                     RRSGRADKPFVAVNCGAIPAELIESELFGHTKGSFTGADRDRRGLWEEANGGTVFLDE
                     ITETTPAFQVKLLRVIQEREIRRVGSNQTLEVDVRIVAASNRNVEEEVSAGRFRNDLF
                     YRLNAVSLVLPPLRERREDIPPLAQSFARRIFSLSPSVTFSPEAVELLERYQWPGNIR
                     ELENAVVRGAAMCDGIIRAKDLPERIRHFREQELTQENSVNADPENEEWPSLAQVEGR
                     YVARVLGKTSGNKQAASRVLGVDRKTLNRMIDRHKITFSRNNGGG"
BASE COUNT         1609 a         2158 c         2093 g         1846 t
ORIGIN      
        1 gctttgaaat tagagtccgt ttgcagaacg cgatacgctt cgcggccgtc agttaccacg
       61 acgggaacgc atccgacctg cttcaggatt gaagtgatta gccgtctgat gatcgggtcg
      121 tcatcagcta ccaacacgcg agaacatttt gttgtgattg tgaatgacac ttagtgaccc
      181 cttttcattg cgcggcaact ggcgcgaacc tttctgcgag gaagactttg atccgcgcaa
      241 actcgatacc aacctgctcg gtcacacggg cggcccccgt caattcattc tcgcggccca
      301 ttcgctcgag ctcgcgaaag tgatcgacga cggcgaccat gccgcaattt gcgctggtac
      361 ctccgcagtt gtgggcgatt agatcgactt cgctggtgtt tccggagctt atggccaggt
      421 ccagcttgat taggttccct tccataccgg agagatacag attcaatatt tcgagcacct
      481 cttcaggatc ttcacccatg gcctgatgga gccggtccag atcaacgggc agatcaaccg
      541 caggctctgc gttagcggca ctggccagga aacgctcgag tactcttgat agttgcgcac
      601 gatccaccgg tttggtgatg tgatcgtcca tgccagccgc gagagacttc tcacgatcgc
      661 cgctgagcgc gtgggcggtc atagcgatga ttggtgtgtg tttcctggtt ccctccaggc
      721 gccggatttc ggtgctggct tcgtaaccat ccatttccgg catctggcaa tccatcagca
      781 ccagatcgta ggcgatacga cttaaagctt cgatcgcctc gcggccattg gccacggcat
      841 cggcgcggta gccaagcttt tgtaattgcc gcaccgctac tttttgattc acgatgttat
      901 cttcggcgag caggattaat ttgtcggaca tatgctttgc ctcccgcaaa gtgtgcctgg
      961 tgacaagcgt agtaacagga actgaagctg ctgatgactt gctcaccagg gttgtgagac
     1021 agtcaaacaa ctgagattga cgaataggtt tggttagata tgcggccacg cctgcggcct
     1081 gcgctctggc gccatctcca cggaccccgg aagaggtcaa caggatgagc cgggctgccg
     1141 caatcgccgg atcagattta atcgtgcgag ctaattcaaa accatccata tcaggcatca
     1201 agagatccaa aataacgaga ttgtaagcag cgccatcggc ggccgcagct cttagtaact
     1261 caatcgccgc cggtcctgag tctgccgcgg cgtgagtcat gccccacgaa ccaatctggt
     1321 gggacagaat ctttcggttt gtggcattgt catcgacgat cagcacgcgt aacttctcaa
     1381 ggctttccag ctctggagat gggggggcca ttaccgtaag ctgcttctct aatttcgcgg
     1441 tgaaccaaaa agtcgatcct tcgcccggct tactggttac gccaattttc ccgcccatta
     1501 gttccaccaa ttgctttgag atcgacaggc ccaaaccggt accgccgtac ctgcgtgtcg
     1561 ttgagccatc agcctgcgta aatgctcgga acagcctgtt ttccgcctcg cggctaatcc
     1621 caattccggt gtcactgata gaaaaccgga tgctcacttc ggtgtcgctt tcactttcct
     1681 tctcgcctcg aacaatgact tcgccccgct ccgtaaactt cagtgcgttg ccgatcaggt
     1741 tcgtgagtac ctgccgcaat ctgcccggat cgccgcgcaa agcagtaggc acgtcgtgat
     1801 atatcaagga cgcgaattcg agttgcttcc cccgagcccg ctcagcgaac acgtcaatgg
     1861 tttcttcgac cgcattgcgc agatcaaaat cgacggtttc aaactccaat tttcctgctt
     1921 caattttcga gaaatcgagg atgtcattaa tgatggttag caacgcgtca ctgctgccgc
     1981 ggatggtttc agcaaagtcg cgctggtctt catcaagctg cgtatcgagc aagagaccag
     2041 tcattccaat aacgccattc attggcgtgc ggatttcgtg gctcatgttg gcgaggaact
     2101 cagatttgag ccgggctgac tcaagcgctg catctcgcgc ctcttccagt tcccgttccc
     2161 cgcgctttcg ttcgatggcc agggcgatct ggttgccgac cgcggaaaga aactcgagat
     2221 cgcgctcggt ataggcggat tccgtctcat agttctgtac aacaagcaca ccgatcacac
     2281 ccgcaggcgt tcgcagcggc actcccagcc atgaagcgct gtcggtccca ctcatcctga
     2341 taccttgttc agacatccgc tgcttggcgg cctctgtcaa caatattggt tggccggtcc
     2401 gcagcacata gctgctgaac ccggccccca ctggcatcgg ttccggaacg ggatcaaatt
     2461 tgtcggccca aaattcaaaa tgcatcaagc tggtcttcgg gtcgtagaga gtaacgaagc
     2521 aattctcagc gtagatgagt ttacgtaatg atctatgagt cagctggagt aactcgtcca
     2581 gattcgcggt tgtgattacc ccttgaacga tgtcagaaat aatttggcgc tccgcttcag
     2641 cgcgccggcg ctcggtcatg tcacgcccga tgccctgaat gccaacgacc acgccgtcct
     2701 ggaaaatcag acgactgctg atgtcaatcg ttacgctgcc cccgcctttg acaaagatct
     2761 ccagttctaa atcgggcagg ctaccgcctg acagtttcgt tgcaagcctc gcgcgtacta
     2821 gttccgcatc ctccggccgg atcacgtcag cgatgttcat ccgcagggct tcctcgcgcg
     2881 tgtatccggt gatccgctca ccagctttgt tgaacgaggt aaaccttccg gtcgagtcca
     2941 ttgtgtagat aatatcgccc gcattctcga tcagttcgcg gtacttctcc tcgctctggc
     3001 gcagcgcgtt ctctccttgc atgcgctcgg taatgtcctg gatggttccc caaaggctcg
     3061 tcaagcgtcc ggtctcatcg gcgcccacct cgccagtaat ctgaagcact cgcaccgctt
     3121 gatctttttg cacaatccga aagttgaaac tgggtatgac gccatgccta agagcctttg
     3181 tgatggctct tttcaccagt tttatatctt ccgggtgaac ctgagcgaag aactcggcca
     3241 ccgaggggcc aaattcccct ggctgaagac cgaaaatgcg gaagagctcg tcggaccaat
     3301 gtaagttttt cttaacaaca tcccattccc agttcccgat atgggcaatc tgttgggctg
     3361 ccgtgagctg cctctcgttc gtcttaagtt caatatcaat ccgcttgcgc tcaatagcta
     3421 agccaagctg atcgccgacc gacgaaagaa atgcggtgtc gcgctggctg taagtatgct
     3481 cttgctcata gtcctgcacc acgagaacgc caattgtgcg cgaattcgtc cgcagcggaa
     3541 cgcccatcca cgaaggagcg tcggttccac tcagctcggt ttcgttcgct tcatctattt
     3601 ggcttccaaa gccttctttc agcaggagcg gctgaccggt gcgcaacata taactgcaga
     3661 ggcctttgtc gacagggtgc ggcgacggga ccggatcaaa ctggtcgacc caatattcat
     3721 agtggatttg gtcagtactc aggttatgaa gagcgatgaa gcaattctct gcggaaagga
     3781 ttttattgat tgcctggtgg gcgagcttaa acaactcatc aagattagct gtcgtgataa
     3841 cgctctggac tatctcaccg atagcttgta gttccgcttt agcccgccgg cggtcggtga
     3901 tatcgcgggc catgccctgc accccggtgg gttttccatc ctcgtaagtg aggcgagagg
     3961 tcacttcgag cattatgcgg cggccgtctt tggccatgat ttcaagctca tacggagacg
     4021 gcgtcgcgcg agtcttacgt gcaagcaact gggaggcttc ctccaggtat tcaggtgcaa
     4081 taacctgagt gaggttcatg ccgagagctt cctgctttgt atagccaacg atcctttcac
     4141 aggccttgtt aactgaggtg taattaccgg agaggtcatg ggtgtagata atgtcgttgg
     4201 cgttctcaaa cagatcgcgg tatcgctcct cgccccgacg gagggctgct tcgacacgcg
     4261 tccgttcact aacctgctca gtgagcgagg tattggctat agtcagttcg gaagttcgct
     4321 cccggacacg ttcttctaat tcgcgctgag cttttcgcaa agctttttcc gtctcttcac
     4381 ggctggctat gctgctcaaa aggagcgcgt gtgacttata catccggcgt atgatcgcca
     4441 gccaggtgaa tagcaatatg gcaagcacgg cgacgccggc gccggcggag aagaccgccc
     4501 ttctgcgttg cgaccgttgc gtagcctcga gttgaacctg gagttgatcg aggaagctgg
     4561 tcattccaag ggcgtagatc cctttctgct tctcgtattg ctggctggat agaatggctc
     4621 tggcttcggc agtcctgccg tcgcgcacca aagtgaaggc gtggttttcc atctccacta
     4681 atcgcatgtt ggccgcgtcc gtctggacta gtctttccga gggggccagc ttcaaaatct
     4741 ctttgaacgc tttgtccaac tgcggctcaa atttacggta gcgcgcttcc cattgaggtt
     4801 cacctgtggc tgccgccatc ctggcggaca tcgtcaggac ttcgtcgaga tcgacgatga
     4861 tgccgtgcag ttcctcagtg cgccagatct gccctttgat gactgaatcc tccccgtaaa
     4921 agcggtaggt gctccaactt aaccaggcta acgccgcccc ggtgaagaca cacgcaagaa
     4981 taaataactt aatcgaaaac cgattgccgg cggtggtggg atttaactgt tgcatcactt
     5041 ctgaagatga cagtcgaagt gtcgctgaga tctcctgggg ttgctttaca aattacgggt
     5101 acggcgcggc ttgatcgttt tcaatcggcc gtgttcctga cctgccgtcg tggtttcgtc
     5161 ctgggggact tctcttcaac aatcggtgta tcgcccgttt cgccggcgat tgctttgacc
     5221 tgctcctgtg cggcggtggg cggcattctc cagggatagt aattacagaa aacaccgaaa
     5281 gcggagatca gaattatgaa aagactggcg agagctcgag gtccgagccg ctggtttgag
     5341 ctgatggggt ggatgctcac ttcaatttcg ccgggcacgg cgacgaacgt gtaatcgtcg
     5401 tagtggtccg gggtgacgct ggttgatgtc gtttcatcga tgcggcccac ccgtcgcaat
     5461 gcttcccgaa attctccggc actggcgtaa cgctcgtcag ggttctgggc catagcgcaa
     5521 tcgaggatcc ccgctaattc gggccccacg acgctattga cttcgtttgc cggcttaagc
     5581 ggattcggtc tggcgctaac cagcgccgcg gctcgggcta acgcatcagg tggcttgatt
     5641 ccggtgagca aatgataaag cgtggcgccc agcgcataga tatcgctttg gggactggtg
     5701 cccaggtcct gaatttgttc gaggggcgcg taccggggcg tgtaaccata aacgctggtg
     5761 caacttatcc cgctatccga gttgtgggat tgggactttg ccagcccgaa gtcgagaagc
     5821 actatatggc cctcaggagt gatcttgaga ttgtggggtt tgatgtcgcg gtgaatgatc
     5881 tgccgctcgt gcgcgtgtag ataaatcagg gcatcaagta actggtcggc ccaggcaact
     5941 accgcattac gcggaaacgg tccgggttgc tgcgcaatca tctcagccag gtcggcgccc
     6001 tcgacaaatt gcatgacaag aaatgcgcga tttccttcgg tgaagtagtc agagacgcgg
     6061 ggcagaacga agtgattcag cccggccatc aggcgcgctt cacgctcgaa ttgtttccac
     6121 atttgcggat cgctggtaag ggtttgcttc agcgccacgg tatggccgag cctgaggtcg
     6181 atggcttcat agacagcgcc catcccccct ttaccgaggt gacgaacgac ttgatagcga
     6241 ctttgtaaga tggtatctgc tccgagcagc agcgtagctg cgtcggattt gctttcgtcg
     6301 gagaacattt gctggatcct ttgaagactg aaggtgaaag gacttccagg aagattgggg
     6361 ctttcctgga aagaaactac ggggcagact aacgatcagg cgcttggagt ttgcttgatt
     6421 tgaaaatggc aaaaaggcct gaactggctt tccttttgcg atgagaacga ccgggcagcc
     6481 gtggtagaga aatcatggca gcgcggtcag cgccgttagg agcaacacgg caagaggcgc
     6541 gctgccatgc ctctcttctt acccgccgcg gagaaatcac gcggctctcg ttaagcttcc
     6601 ctgagcaaga agcattccgc cggcaatcgg caccaaagac aatcacatat caaggaaaat
     6661 taggttttct tgcgcgatga tctgcccggg tgggtcattt gtctgaggca atattcgccg
     6721 gtgggcattt cggggcagct taaccgccac cgttattcct gctgaaggta atcttgtgcc
     6781 gatcaatcat ccggttaagg gtcttgcgat ccacgccgag cacgcgtgaa gcagcctgtt
     6841 tgtttccgct cgttttcccc agcacgcgcg ccacgtaacg tccttcgacc tgggccagcg
     6901 acggccattc ctcgttttcc ggatcagcat tgactgaatt ctcctgtgtc agctcctgtt
     6961 cgcggaaatg gcgaatacgc tcaggcaaat ctttggcccg gattattcca tcgcacatcg
     7021 ccgcccctcg gaccaccgcg ttctccagct cgcggatatt tcccggccac tgatatcgct
     7081 cgagcaattc cacggcctca ggagagaagg taacgctcgg actcagcgaa aatatgcgac
     7141 gggcaaagct ctgggccaac ggaggaatgt cttcgcggcg ttcgcgcagc ggcggcagca
     7201 ccagagatac agcattgagt cgatagaaga ggtcgttgcg aaatcgccct gcggaaactt
     7261 cttcttcgac gttacgattg ctggcggcaa cgatgcgcac gtccacttcc agcgtttgat
     7321 tcgatccgac gcgacgaatt tcgcgctcct ggataacgcg taacagcttt acctggaaag
     7381 ccggagttgt ttccgtgatc tcatccagaa aaactgtgcc gccgttggcc tcctcccaaa
     7441 gcccgcgccg atcccgatcc gcgccggtaa aggaaccttt cgtgtgtccg aacaactctg
     7501 attcgattag ttctgcgggg atggcgccgc agtttaccgc gacaaaaggt ttgtcagccc
     7561 ggccactgcg acgatggatg gccgccgcga ttaactcctt gccggtgccg gactctccgg
     7621 ttaacagcac cggcaaattg gtggccgcga cgcggcccac ttgtttcatt acttcaatga
     7681 aaacctggct ccgcccaatc aggttg
//
LOCUS       DATDBY010000464         2733 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1395798, whole genome shotgun sequence.
ACCESSION   DATDBY010000464 DATDBY010000000
VERSION     DATDBY010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395798"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1228
                     /locus_tag="VIT19_08660"
     CDS             <1..1228
                     /locus_tag="VIT19_08660"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5839093.1"
                     /translation="KGFEGIGSRRGTLVVWLSALATLSVIVAGITTAQERPRTTTASP
                     TPTPTSPAPTPLQTGPGRRIAPQLGEPPPPPILRPKPTPTPDASTAEIDEGSTLRINA
                     DLVTLNVRVIDRNNRPINGIRQDEFKVFEDGVPQSIFSFTQEEVPVIYGLAVDTSGSL
                     RPAFDQVINAAKTIIDSNKPGDETFIERFISSDKIETVQDFTSSKDALMDALDTLYIE
                     GGQTAVIDGVYLAAEHVANYKKSRDDDRRRRALIVITDGEDRASYYAQEQLFRQLREQ
                     DVQIYVIGFVNELEAERGLIRKSPRGKATDLINKLATETGGRAFFPQSISELPQIANE
                     IVRDLRTQYVISYDPSNKTPDGTYRAIRVVVNQPTGSEKRIALTRSGRTAIAPGSAAR
                     PPTPANRQPTPRRPPQ"
     gene            1355..1891
                     /locus_tag="VIT19_08665"
     CDS             1355..1891
                     /locus_tag="VIT19_08665"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEY5839094.1"
                     /translation="MPSIETDRLLLRMIRADDLDHLASLLSDPDVVRYVGDGKPAGRE
                     EAARALESIIKHWDTHGFGRWAVVEKSTGEFIGFGGLRSLFGTPEVVYHLTKAHWGKG
                     YATELARAALRFGFQERGFDRIVAITKPQNAGSIHVMDKLGLRFEKHARYYDIDVVQY
                     EINREEFPSGEAAFKVLA"
     gene            complement(2290..>2733)
                     /locus_tag="VIT19_08670"
     CDS             complement(2290..>2733)
                     /locus_tag="VIT19_08670"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEY5839095.1"
                     /translation="AILVQRQYQVWQPRGVEAAGRPFAGYFGPKVVLQNWRSASNAEM
                     FPAGFRALGLGKVIGTPTMGAVIGTGSYSLIDGSTVRTPGVGVYLADAKRTNMENYGV
                     QPDILVDNPPADNLAGRDRQLEVAVEDLLKQLGTTRRNIATKEQQ"
BASE COUNT          622 a          829 c          769 g          513 t
ORIGIN      
        1 taagggtttt gagggtattg gctcccgtcg cggcacgttg gtcgtttggt taagcgcgct
       61 cgcgaccctg tctgtaattg tggccggcat tacgactgcg caggaacgtc cgcggacaac
      121 gacggcgtcg cctaccccga caccgacgtc acctgcaccg actccgctgc agaccggccc
      181 gggccgccgg atcgcgccgc aactcggcga gccgccacca ccgccaatcc tgagaccgaa
      241 accaacgcca acccctgacg cttcgaccgc ggagatcgac gaaggcagca cgctcaggat
      301 taacgctgac ctggtgacgc tgaacgtgcg cgttatcgac cgcaacaacc ggccgatcaa
      361 cggtattcgc caggacgaat tcaaagtttt cgaggacggc gtaccgcaat cgattttctc
      421 gttcacgcag gaagaagtcc cagtcattta cggcctggcc gtggatacgt ccgggtctct
      481 gcgacccgcg ttcgatcagg tcatcaacgc cgccaagacg atcatcgaca gcaacaagcc
      541 gggcgatgaa actttcatcg agcgcttcat cagcagcgac aaaatcgaaa ccgtgcagga
      601 tttcacctca agcaaagacg cgctgatgga tgctctcgac actttgtaca tcgaaggtgg
      661 acagacggcc gtcatcgacg gcgtgtatct cgcggcagaa catgtagcga attacaagaa
      721 atccagagac gacgatcgcc gccgtcgcgc gctcatcgtg ataactgatg gtgaagatcg
      781 cgccagctac tatgcgcagg aacagttgtt caggcaattg cgcgaacagg acgtgcaaat
      841 ctacgtgatt ggatttgtga atgaactcga agccgaacgc ggtctgattc gcaagagccc
      901 gcgcggcaaa gcgacggatc tcatcaacaa gctcgcgacc gaaaccggcg ggcgggcctt
      961 cttcccgcaa tcaatttctg agctgccgca gattgccaac gaaatcgtgc gcgacctgcg
     1021 aacgcagtac gtgattagct atgatccgtc gaacaagact cccgacggga cgtatcgcgc
     1081 aatcagggtc gtcgtgaatc aaccgacggg atccgagaag cgcatcgcac tgacgcgctc
     1141 gggaagaaca gccattgctc ccggcagcgc cgcgcgaccg ccaactcccg cgaaccggca
     1201 accgacaccg cgtcgtccac cgcagtaagc gcgttcccgc gtttgactca caatccgcaa
     1261 attcagtatt gtccgaaaga acgttgggta cgcacgcctc tggcgtgctt tgtcaaaaaa
     1321 agcgggcacg ccagaagcgt gcgtaccgag ctacatgcca tcaatcgaaa ccgaccgatt
     1381 gctgctgcgc atgatccggg cagacgatct ggatcacctg gcctcattgc tgagcgatcc
     1441 tgacgtagtc agatacgtcg gcgacggcaa gcctgccggt cgagaagaag ccgcgcgcgc
     1501 gctcgaaagc atcatcaaac attgggacac gcacggattc ggacgctggg ccgtggtgga
     1561 aaaaagcact ggcgagttca tcggcttcgg cggattgcgt tcgctcttcg gcacaccgga
     1621 ggtcgtttac cacctcacca aagcgcattg gggaaaaggc tacgcgactg agctggcccg
     1681 cgcggcgctg cggttcggat ttcaggagcg tggttttgat cgaatcgtgg cgattaccaa
     1741 gccgcagaac gcggggtcga tacatgtgat ggacaaactt ggcctgcgct tcgagaagca
     1801 cgcgcgttac tacgatattg acgtcgtgca atacgagatt aaccgcgagg aattcccgtc
     1861 gggtgaagcc gcattcaaag tgcttgccta atattcacgt gtgagtgact atctgacaac
     1921 atcacgtgcc gttttgcgct ttgccgcctc gctgtgcgga aaggcccaca ttcgtcagcc
     1981 ccgttagggg ccaaatattt atagtcccaa agtccaacct aaataatcgg ctcctttagg
     2041 agcgaaatat gcctccgcct gtttcgctcc taaaggagcg aagtgatctc gtccacaccc
     2101 gactataaac atctcgctcc tgacggagcg aagacccggt ccttccgcac agcgaggcga
     2161 caaagtcgca cacggaaaac gccttgaccc aaccgctagg cgggacaaaa aaatagaggc
     2221 gggacttgtc ccgcctcttg taacgcaaga tgaaatcttg cgcgcaatcc cgaaccaatc
     2281 ggtattgcct tactgctgtt ccttggtcgc gatattccgc ctggtagtcc cgagctgctt
     2341 caacagatct tcaaccgcaa cttccagttg gcgatcgcgg cccgccagat tgtctgccgg
     2401 ggggttgtcc accaggatgt caggctgcac gccatagttt tccatgttcg tgcgtttcgc
     2461 atccgccagg tagacgccga cgccaggcgt gcgcacggtc gaaccgtcaa tcaggctgta
     2521 gctgcccgtg ccgatcaccg cgcccatggt gggcgtgccg atcactttgc ctaagcccaa
     2581 ggcgcggaag ccggccggaa acatctcggc attcgaagcc gagcgccagt tttgcaaaac
     2641 gacctttggc ccgaagtatc cggcgaaggg acgaccggcg gcttcgacgc cgcgcggttg
     2701 ccagacctga tactgccgct gcacgagaat ggc
//
LOCUS       DATDBY010000465         2135 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2896268, whole genome shotgun sequence.
ACCESSION   DATDBY010000465 DATDBY010000000
VERSION     DATDBY010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2896268"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..473)
                     /locus_tag="VIT19_08675"
     CDS             complement(<1..473)
                     /locus_tag="VIT19_08675"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY5839096.1"
                     /translation="MSLLLEGKRAFITGGTRGIGAALCEVFAREGADVAFSYNSRDDL
                     AEEIKQKIEALGRKARSFKVSVTDRFGMKHLTRELVQEWGGMDILVNNAAINRGDNFA
                     TTTDRAWDEVIGTNVGSLFAVTKPMYKQMIRQRAGAILNITSIGAIRALPTAVHYA"
     gene            complement(755..1948)
                     /locus_tag="VIT19_08680"
     CDS             complement(755..1948)
                     /locus_tag="VIT19_08680"
                     /inference="COORDINATES: protein motif:HMM:NF018613.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5839097.1"
                     /translation="MNPNNPKILILSSDTGGGHRSAAAAIVAGIQSFVHGESYAIRTI
                     RAVEESHHLAAKMVAVYNWLLRNRQGWMKYYYWFINRFRPDTREFFYKRTVGYVAGQF
                     EKWCPHVVVSVHPLTQHMFARVLKELGLAHRIPLVTVVTDPYYGFWKGWACDDVTLYL
                     VATEDARRQLIDYGISPQRIKISGMPVHPKFDFPGEHAAQTARIALGLDPDKFTVFVN
                     AGWEGGGNIPLIFRELVRGELDVQAIFLAGRNEELRGEAEQIASEAKFPVKVIGYSDE
                     VEKLMRAANVMISKLGGLTTFEALACRVPIIADSTTEPMPQEAGTAAMVAKSGAAVML
                     QKPSDVVPVIRRMIDDSKHYASLRAATITLGIPNATRRIVEEIVSLIPEQATPSAEAL
                     AERAA"
BASE COUNT          459 a          630 c          582 g          464 t
ORIGIN      
        1 gcgtaatgaa cggcagtcgg cagcgcgcga atcgccccga ttgaagtgat gttgagaatc
       61 gcgccggcac gctggcgaat catctgcttg tacatgggct tggtgacggc gaacaggctg
      121 cccacgtttg taccgatcac ctcgtcccac gcgcggtcgg tagtcgtcgc gaaattgtcc
      181 ccgcgattga ttgccgcgtt gttcacgaga atgtccatgc cgccccattc ctgcaccagc
      241 tcgcgcgtta aatgcttcat gccgaaccgg tcggtgacgg agactttgaa tgatcgcgct
      301 ttacgtccga gcgcttcaat cttctgctta atttcttccg cgagatcgtc gcgcgagttg
      361 tagctgaatg cgacgtccgc gccttcgcgc gcaaacacct cgcacagcgc ggcgccaatg
      421 ccgcgcgtgc cgccggtaat gaatgctcgt tttccttcga gtaaaagact catgctgtta
      481 cggtagcaca gagagattac agaaccgcga ccgataggga gcgggttaaa ttctcaagtt
      541 gcgtattcga tccgctcgcg accactcgcg gttctgtaac tctccacaga ctgaagtctg
      601 tgccacttaa ttgtttcaag tttgttcgga gtgtaaaacg acgggattaa accgcgaaca
      661 gagcgcgcca gtcaagaagg gttagcgcaa gacgctctct tgtgggcgca agttaccaac
      721 ttgcggtaca cgccagaggc gggcgtgccg gtcgctacgc tgcacgttca gcgagcgcct
      781 cagcactcgg agtcgcctgc tcaggaatca aggaaacgat ctcttcaaca atccgcctcg
      841 tcgcattggg aatcccaagc gtgatcgtgg ccgcgcgcag agacgcgtag tgcttggaat
      901 catcaatcat gcgacgaatc acgggcacca catccgacgg tttctgcaac attacggcgg
      961 cgccgctctt tgcgaccatc gcagccgttc cggcttcctg cggcatgggt tcagtagtcg
     1021 aatcggcaat gattggaacc cggcaggcca aagcttcaaa cgtggtaaga ccgcccagct
     1081 tcgaaatcat cacgttcgcg gcccgcatca gcttttcgac ttcgtctgag tatccgatga
     1141 ctttcacggg aaactttgct tcggaagcga tttgctcggc ttcgccgcgg agttcttcgt
     1201 tccggccggc gagaaagatt gcctgcacgt cgagctcccc gcggacgagt tcgcggaaga
     1261 taagcgggat gttgccgccg ccttcccacc cggcgttcac aaaaaccgtg aacttgtccg
     1321 ggtccaaacc taaagcaatg cgcgcagttt gggcagcgtg ctcgccggga aaatcaaact
     1381 tcggatgcac gggcatgccg gaaatcttga tccgctgagg cgagatcccg taatcgatca
     1441 actgccggcg cgcatcttcg gtggcgacga gataaagcgt cacgtcatcg caggcccagc
     1501 ctttccaaaa tccgtagtaa ggatcggtga cgactgtgac caacggaatg cgatgcgcca
     1561 atccaagctc tttcaacacg cgcgcaaaca tgtgctgcgt tagcggatgc acgctcacca
     1621 cgacgtgcgg acaccacttc tcaaactggc cggctacgta tccgactgta cgcttataga
     1681 aaaactcgcg cgtatcggga cgaaaccgat tgatgaacca gtagtaatac ttcatccaac
     1741 cctggcggtt acgcagcagc cagttgtaaa ccgctaccat cttcgccgcc agatggtggg
     1801 attcttcgac agcgcgaatc gtgcgaatcg cgtacgactc gccgtgcacg aacgactgaa
     1861 tgccggcgac gatcgccgcc gccgccgaac gatgcccgcc tcccgtgtca gaggaaagaa
     1921 tcaggatttt tgggttgttt gggttcactt tgatcagcga gtcagagtac cagctttagc
     1981 tgggcagttg ttgaccgaga gcccgactaa agtcggtact ctaacgctgt cttacacatt
     2041 cacggcaatt ccgtcaggct gctcggcagc accacgcttt tccaattccc tgctcgcctt
     2101 tttcatctcg cgctcgatct tcttgatctg gatca
//
LOCUS       DATDBY010000466         2119 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2478753, whole genome shotgun sequence.
ACCESSION   DATDBY010000466 DATDBY010000000
VERSION     DATDBY010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2478753"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..965)
                     /locus_tag="VIT19_08685"
     CDS             complement(<1..965)
                     /locus_tag="VIT19_08685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839098.1"
                     /translation="MERAENIPIATWSPVTVRERGRVSAKTFAAILIGSALLSAAFAS
                     WVPLTASIATVFLFAGPHNWFELRYFLARLPVRFGRSRNFFIVAFSGIFALTLAYVSL
                     PALYYANLWSGENWPTAIAAWNTGLLLWIAVLVAMRGKQTSRRDWSWAFPVAFGLCAI
                     NWLVPDLFSLGIVYLHPLVALWFLDRHLRRTKPEWLKTYRRCLMLLPVLLAGMLWQLS
                     RTPSLAEDNGLFWRITQHAGAELLPNVSSHMLVSTHVFLEMLHYGVWIVALPLIGATG
                     AIWKVKTIPVAGHSRGFPKLIASVLVFSLFIVAVLWLGFSMDYNAT"
     gene            complement(1142..1726)
                     /locus_tag="VIT19_08690"
     CDS             complement(1142..1726)
                     /locus_tag="VIT19_08690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839099.1"
                     /translation="MRRTLISMAAVGALLTGFVFAFGDIARPKPTTPTEPHGQIVLHS
                     GLTIMSDSKTWDARLQIPAETLKAINEAAQRKDGSASLMQSITHSSTRTMMAGLFMFL
                     AVSFAGVWLARSNQRRNVKAIAAVLVIAFVFGAATVIVRANAGPPGYVRWQNLPQALK
                     DGRATSAGVDVEIVPGNGEIKLIVPLRKTNQPGE"
BASE COUNT          527 a          626 c          555 g          411 t
ORIGIN      
        1 gtggcgttgt agtccatcga aaagcccagc cacagtaccg ccacgataaa caggctgaag
       61 acaagaacac tggcgatcag tttcggaaaa ccacgcgagt ggccggcaac cggaatggtc
      121 ttaaccttcc aaatcgcgcc ggtcgcgcca atcaacggca gcgccacgat ccagacacca
      181 tagtgaagca tctcgagaaa cacgtgcgtc gagacaagca tgtgactcga aacgttcggc
      241 agaagctctg cgccggcgtg ttgcgtgatg cgccagaaca aaccgttgtc ttcagccagc
      301 gacggcgtgc gcgaaagctg ccagagcatg ccggccaaca gtaccggcag aagcatcaga
      361 cagcggcggt acgttttcag ccattccggt tttgtgcggc gcaagtgccg atcaagaaac
      421 cagagcgcta cgagcgggtg taggtagacg atcccaagac tgaacaaatc gggcactaac
      481 cagttgattg cgcacaggcc aaacgcgacc gggaaagccc atgaccaatc acgtcgcgag
      541 gtttgcttgc cacgcatcgc gaccagcact gctatccata acaagagccc cgtattccac
      601 gccgcaatcg cagtgggcca gttctcgccc gaccaaaggt tcgcgtaata gagcgccggg
      661 agcgaaacgt aagcgagggt gagcgcaaaa attccgctga acgcaacgat gaagaagttt
      721 cgtgagcggc caaatcgcac ggggagacgc gcgaggaagt agcgcagctc aaaccagttg
      781 tgcggaccgg cgaaaagaaa cacagtcgcg attgacgcgg tcaacggcac ccaactggca
      841 aacgcggctg ataaaagcgc gctgccaatc agaatggccg cgaacgtttt cgcagacacc
      901 cgcccgcgct cgcgtactgt aacgggcgac catgtcgcga tcggaatgtt ttcagctcgt
      961 tccatttaac gtttgtactt tgttctttgt gctttgtact ttgatttctt aatcacagcg
     1021 acactttgaa cacacatcaa agctcaaagt actaagtaca aagcacatct gccctgtcgt
     1081 aggccctcac cctagccctc tccaaaaggg agagggaaca acaccgctgg ctgttctgac
     1141 cttactcgcc aggttgattc gttttccgca gcggaacgat cagcttaatc tctccattgc
     1201 ccggaacgat ctcaacatcg acacccgcgc ttgtcgctct gccgtccttc aaagcctgcg
     1261 gcaagttctg ccagcgaaca tatcccggag gtccggcatt cgcgcgcaca ataaccgtcg
     1321 ccgcgccgaa tacgaacgca atcaccagca ccgccgcgat ggctttcacg ttgcgacgct
     1381 gattcgaacg cgcgagccaa acaccggcga acgagacagc gagaaacatg aacagtccgg
     1441 ccatcatcgt ccgcgtcgag ctgtgcgtga tgctttgcat cagtgaggcc gaaccatctt
     1501 tcctttgcgc ggcctcattg atcgccttca aagtctccgc cgggatttgc agtcgcgcat
     1561 cccaggtttt gctgtccgac ataatggtta gtccactgtg aaggactatt tgtccgtggg
     1621 gttcagtcgg cgtcgtcggc ttcggccgcg cgatgtcgcc gaacgcgaaa acaaaaccgg
     1681 tcagcaaagc gccaaccgcc gccatcgaaa tcaaagttcg tctcatgatg ccctcctaaa
     1741 ttcggcgcag tatagcgcag tactcttggg tcttgggtct tgggtctttg gtcttaggtc
     1801 ttaggtcctg gcattctcaa tctggttacc cacgccacca aagtcctaag tcctaagacc
     1861 aaaggccaaa gtccaaagac caaagaccaa agcacccctt ggatgctgat tccgagacgc
     1921 ggatgctaga atgtttttgc acactttgag gcaaacaaaa cttggcccgc gaacttcgag
     1981 tcctaaacac caaacctcgt cagcctaaac ctgattggct gcggatccgt ctgggcgatc
     2041 cgacgaatca gaatcacctg ctgaagctga tcgaagggtt gaacctgcac acggtctgtc
     2101 aggaagcacg gtgcccgaa
//
LOCUS       DATDBY010000467         3647 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_428061, whole genome shotgun sequence.
ACCESSION   DATDBY010000467 DATDBY010000000
VERSION     DATDBY010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3647
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428061"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VIT19_08695"
     CDS             complement(<1..296)
                     /locus_tag="VIT19_08695"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5839100.1"
                     /translation="MMASSSSNLSLAGRVRNFSGWRPLALRDFRLLFVGQAVSLLGDQ
                     FYLVALLWLVLQMTGSDLAVGTIMMAATIPRMVFLLVGGAVSDWVSPHKLMVAS"
     gene            complement(396..1091)
                     /locus_tag="VIT19_08700"
     CDS             complement(396..1091)
                     /locus_tag="VIT19_08700"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5839101.1"
                     /translation="MSTPVSALIRLENVTKIFYTDELETHALSAVSLEIAAGEFVSIA
                     GPSGCGKSTLLSILGLLDTPTAGQYWLSGEAVADLPMSERARIRNRQVGFIFQSFNLV
                     GDLSVFENVELPLTYRGMDRAERKQRVMQALEKVGMAHRAKHLPAQLSGGQQQRVAVA
                     RAIAGEPAILLADEPTGNLDSANGEAVMKLLTNLHEAGSTICMVTHDQRYAGQASKEI
                     HLFDGRVVDQPAQ"
     gene            complement(1122..2378)
                     /locus_tag="VIT19_08705"
     CDS             complement(1122..2378)
                     /locus_tag="VIT19_08705"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEY5839102.1"
                     /translation="MDVPIRKSSRRSRRTQIIVYSVVGLFAISIITFGVSRLRPASPS
                     LERSTALIETVKRGPMLRDVRGSGTLVAEDIRIIAASTAGRVERVLVQPGTEVGPGTV
                     LLELSNSELKQSAVDAEYQVKAAEAEQKNLKVKLESERMTQQSVTATVKAEYQQARLQ
                     LDADEALAKKGVLPALSVKISQVRTQDLANRYEIEQKRLAVVTRSADAQVAAQQARVS
                     QLRALLNLKNEQVNNLRVLAGTRGVLQQMTVEEGQQVAPGTNLARVVAPEHLKAELKI
                     AETQVKDVQIGQRAQIDTRNGIIPGHVSRMDPAAQQGTFTVDVALDGALPAGARPDLT
                     VEGTIELERLDDVIYITRPAFGQAHSTIKLFKLDPDGNNATRVQVKVGRSSVNALEVL
                     EGLQPGDRVIISDTSALDTFERIRLN"
     gene            2894..3409
                     /locus_tag="VIT19_08710"
     CDS             2894..3409
                     /locus_tag="VIT19_08710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839103.1"
                     /translation="MPQSPRKNDDTSYLVTYKAALEDLAEMMAEREELDAKRDDIDKR
                     IIRLRDAITGLGGLCNMNAESIAKEHPELFPDRVTPDVGFTDAIRMVFKKNPDYFHSP
                     VWIRDALEEDGFDVDKYKNVLASIHSIVKRLKIKGDVMEANREGKAVYKLNPKGELAK
                     TIIVSDDDVPF"
     gene            3444..3519
                     /locus_tag="VIT19_08715"
     tRNA            3444..3519
                     /locus_tag="VIT19_08715"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3477..3479,aa:Ala,seq:tgc)
BASE COUNT          811 a         1030 c          989 g          817 t
ORIGIN      
        1 ttcgacgcga ccatcaactt gtgcggcgaa acccagtcac tcaccgcacc gcccaccaga
       61 agaaaaacca ttcgcgggat ggtggccgcc atcatgatgg tgccgaccgc cagatccgat
      121 cccgtcattt gcagcaccag ccacagcagc gccacgagat aaaactggtc acccagcagc
      181 gagactgcct ggccgacaaa cagcaatctg aagtcgcgta acgcgagggg ccgccatcct
      241 gaaaagttgc gcactctgcc ggcgagggaa agattcgatg aggaactcgc catcattttc
      301 aaataatcca gaacgccaac cgctgtggca cagactttag tcagtgattc tcatcgatcg
      361 aaaccacaga ctgaagtctg tgccactgag ctaatctatt gcgcgggctg atcaactaca
      421 cggccatcga ataaatggat ttctttgctg gcctggccgg cgtagcgttg atcgtgggtg
      481 accatgcaga tcgtcgatcc cgcctcatga agattcgtca gaagtttcat gaccgcttca
      541 ccgtttgctg aatcgagatt acccgtcggt tcatccgcta aaagaatcgc aggttcaccg
      601 gctatcgccc gggcgactgc gacgcgctgc tgctggccgc ccgaaagttg cgcgggcaga
      661 tgtttggccc ggtgcgccat tccaactttt tccagtgcct gcatcacgcg ctgtttgcgt
      721 tcggcgcgat ccatgccgcg atacgtcagc ggcagctcga cgttttcaaa aacgcttaga
      781 tcgccgacca gattgaagct ttgaaagatg aatccgacct ggcgattacg aatgcgcgcg
      841 cgctcactca tcggaagatc ggcaacggct tcaccgctca accagtactg acccgcggtg
      901 ggcgtatcca acaatcccag gatcgacaac aaggtagatt tgccacagcc cgaaggcccc
      961 gcgattgaaa caaactctcc ggcagcgatc tcaaggctaa ccgccgacaa cgcgtgcgtc
     1021 tcgagctcgt cggtgtagaa aatcttcgtc acgttctcga gacgtattaa cgcagagaca
     1081 ggggtgctca taatggtgcg tttgctatcg ccgcgcgtcg gttagttcaa gcgaattcgc
     1141 tcgaacgtgt ccagcgcgga cgtatcagaa ataatgacgc ggtcgccggg ctgcaatcct
     1201 tcgaggactt ccagcgcgtt gacggagctg cgcccaacct tcacctgaac gcgggttgcg
     1261 ttattgccgt ccgggtcaag cttgaacaac ttgatggtgc tgtgcgcctg tccgaacgcg
     1321 gggcgcgtga tgtagatgac gtcgtccaga cgttccagtt cgattgtccc ctcaacggtt
     1381 aaatctggac gtgcgccggc tggaagcgcg ccatccaatg ccacatcgac cgtgaaggtg
     1441 ccttgttgcg ctgccggatc cattcgcgag acgtgtccgg ggatgattcc gtttcgcgtg
     1501 tcgatctgtg cgcgctgccc gatctgaaca tccttgacct gagtctcggc aatcttcaat
     1561 tcggctttaa ggtgctcggg cgcgacgacg cgcgccaggt tcgttcctgg cgcaacttgc
     1621 tggccttctt ctacggtcat ttgctggagc acgcccctgg ttccggccaa cacgcgcagg
     1681 ttattaacct gctcgttctt caggttcagc agggcacgaa gttgtgagac gcgggcctgc
     1741 tgtgcggcga cttgcgcatc ggcagagcgc gtcacgacgg caagccgctt ttgctcgatc
     1801 tcataccgat tagcgaggtc ctgcgtgcga acctgcgaaa ttttcacact gagcgccggc
     1861 agcacgcctt ttttcgcgag cgcctcatca gcgtcgagtt gcagcctcgc ctgttgatac
     1921 tcggccttga ccgtggcagt caccgactgc tgcgtcatgc gctcgctttc aagctttacc
     1981 tttaaattct tttgttcagc ttccgcagcc tttacctggt attcagcatc aactgcggat
     2041 tgctttagct cggagttgct caactcaagt agcaccgtcc ccgggccgac ttccgtcccc
     2101 ggctggacca gaacacgctc aacacgtccg gctgtcgagg cagcgatgat gcggatgtct
     2161 tccgcgacga gtgtgccgga tccgcgaacg tcgcgcagca taggaccgcg cttgactgtt
     2221 tcgattagtg ccgtcgaacg ctcaagcgaa ggcgacgcgg gtcgcagtcg cgaaacaccg
     2281 aacgtgatga tggaaatggc aaagaggccg acgacgctat agacgatgat ttgcgtccgc
     2341 cgactgcgtc gggaagattt cctgatgggt acgtccacta cagatgggcc acaaaaacat
     2401 tcaagctgcg cagctgttct aattagtaca agcacgatca gaagtcaact tcattctcag
     2461 cgcgcgtcgt attcgtaagt ttagctaaaa gctttacatg tgatcgtttg aaatctgtcg
     2521 cgcaactgcc ggcgcatcct tggctgacga ctgagttgac gtcacaagtg ggcacgcacg
     2581 acggcagcgt tccctgggct ttgcctaaaa aattccatgg gctttgcctc ataagtcgat
     2641 tttgacccag aaccctccgc caagtccgaa tcttgaccca aaacggtgct gttgccttta
     2701 ggccaaggct ccccggagtc ccgcatagcc ttgaaagccc taatggcccg ttggagttgc
     2761 gggattttag accgagcttc cgtcagtaat ttttcggctt cggcgatggc tgtgtcccat
     2821 tgatttacac tatttagaca cgaccgcaga atagttgttg actttgattt agacatcgct
     2881 ataatggcct cccatgccac aaagtccccg taaaaacgac gatacttctt atctggtgac
     2941 gtacaaagcc gcgttggaag atttggccga gatgatggcc gaacgtgaag aactggacgc
     3001 gaagcgggat gacattgata aacggattat ccgtctcagg gacgcgataa ctggcctggg
     3061 cggcctctgc aacatgaacg ctgaaagcat cgcgaaagag catcccgagc tgtttccaga
     3121 ccgcgtcact ccagacgtcg gctttactga cgctattcgc atggtgttca aaaagaaccc
     3181 cgactacttt cactcgccgg tctggattcg ggacgcgttg gaggaggacg ggtttgacgt
     3241 ggacaagtat aagaatgtat tggcctcgat ccacagcatc gtgaagagac tgaagataaa
     3301 aggcgatgtt atggaagcaa accgagaggg aaaggctgtc tacaaactca accctaaggg
     3361 cgagttggca aagaccatca ttgtgtctga cgacgacgtg ccgttttagt tttggatttg
     3421 aggctctttg aaagttaatt agaggcgggg atggcgaatg gcaagccgcc acgatttgca
     3481 atcgtggata tgccggttcg attccgaccc ccgcctccaa ctttgcattt ccggcaggtg
     3541 cgctaacacc cgccggaatg ttcaaccaca acacagtcga agctgcatcg tggcctaagc
     3601 aaccgagatt ataccgcttc tgcctgtgtt ttttccaaaa aggagat
//
LOCUS       DATDBY010000468         2825 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1466350, whole genome shotgun sequence.
ACCESSION   DATDBY010000468 DATDBY010000000
VERSION     DATDBY010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2825
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1466350"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2270)
                     /locus_tag="VIT19_08720"
     CDS             complement(<1..2270)
                     /locus_tag="VIT19_08720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839104.1"
                     /translation="MSLEELYSAVQSLARGGKLNLWDLADKCGGLPELVTHLPFVHEL
                     SLYSGLKITPISDGKFSVSGTGKSGLLDGITATIEFQGGGNATAAELTLFSGKWSAAG
                     GPLKSPDLFAAFGLTSALSNPPPWDLTLTAVSFTDDLGAKKLDLEIDGQLSIAATNLP
                     FTLSDKSGGWTIDAKTGGGLAINFTAVVTEVFGKFGLDLPDHLPSFSLGNLDFNYDFA
                     TGAAMFTGASTVPTPVQLGTQTHDVDTNLDLTVRTEANGKRSFAGYLRGTITIGTAVF
                     AGAYDFGDATVLKASWNGASGTLGYQDLAAAHGIQHALQVPGDMALPLTRASFEYEVA
                     KGRFLLGADSKYGEAFFVASNANTTWDFAFGILIEPSQIPGFPNLEVLQLNDTMLVLS
                     TVQDDNFVVPTLPGVLQPGMLSAPPPHTFPTIGTTKMPLKPGVSLVALLELGNGNSNV
                     IVKNLRAAVGRSQLLIQASVESLNQISFMSELDGSLAIAGAGKDKLVLSDVYVQLSES
                     GAAVSATVGGSVLIPFNHVTLQATGAMAISETSMEAMFQLKAQQDGQPAAIPSPFGLA
                     GVALDELDIEVGVDFEPPGVDLGIEGKFNIKGQQVDANDFTIVLDLEGEVPNSTYLST
                     HIQSLTIADAITALTNQTLSHAPSVITAVQGQDISMYWSESAGIVLPDGTLSQGGFGF
                     NGILLIGGFTAHGSLAVSTASGVSGDAELSPIQLGKVFSLTGSGKGVTVKQVQTADGQ
                     WEAMAVPPQPGQKLTTR"
     gene            complement(2508..>2825)
                     /locus_tag="VIT19_08725"
     CDS             complement(2508..>2825)
                     /locus_tag="VIT19_08725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839105.1"
                     /translation="FQPTLEDKRTLLLEYFEMLQQDMPKIAAMGRMKQLAGQFTRGLQ
                     GGALFRTALYHSHSVEEILGRISEYFEAINNGRPYYGEGRPPGEIIEAPVLDSCEAAT
                     AAV"
BASE COUNT          628 a          808 c          798 g          591 t
ORIGIN      
        1 cgcgtggtca acttttgccc gggctgaggc gggaccgcca tagcttccca ctggccatca
       61 gcagtctgta cctgcttgac cgtcacccct ttgccggaac ccgttagcga aaacaccttg
      121 cctagttgaa tcggcgacaa ctcggcgtcg cccgaaacac cagacgcagt actcaccgca
      181 agcgaaccat gagcggtgaa accgccgatt aagagaatgc cgttaaagcc gaagcctccc
      241 tgcgaaagcg ttccgtccgg aagaacaatc cccgcgctct ctgaccagta catcgagatg
      301 tcctggccct ggaccgccgt gatcacactc ggcgcatgcg acaaagtctg gttggtcagc
      361 gccgtaattg cgtcggcgat cgtcagcgat tgaatgtgag tcgaaagata agtggagttt
      421 ggaacttcgc cttcaaggtc gagcacgatg gtgaaatcgt tggcatcgac ttgttggccc
      481 ttgatgttga acttgccttc gatgcccaaa tcgacgcccg gcggctcgaa gtccacgccg
      541 acttcgatgt ccaactcatc gagcgccaca ccggccaggc caaaaggcga aggtatcgcc
      601 gccggttgtc cgtcctgctg tgcctttaac tgaaacattg cctccatcga tgtctcagaa
      661 atagccatcg cgcccgtcgc ctggagcgtc acgtggttga aaggaatcaa cacgctgccg
      721 ccgaccgtgg ctgagacggc cgctccactt tcactaagct ggacatagac atctgaaaga
      781 accaacttgt ctttgccggc ccccgcgatc gcgagactgc cgtcgagctc tgacataaaa
      841 ctgatctggt tgaggctctc gaccgatgcc tgaatcaaga gttgtgaacg gccgacggcg
      901 gcgcgcaggt ttttcactat aacgttcgaa tttccattac cgagttcgag caaggcgacg
      961 agactgacgc ctggcttcaa aggcatcttc gttgtgccga tggtcggaaa cgtgtgcggc
     1021 ggtggcgcgc tgagcatgcc cggctggaga actcccggca aagttggcac cacgaagttg
     1081 tcgtcctgca ccgtcgagag cacgagcatc gtgtcgttca gttgcagaac ttcaagattg
     1141 ggaaacccgg gaatttgcga aggctcaatc aagattccga aagcaaaatc ccaagtcgta
     1201 ttcgcattgc tggcgacaaa gaatgcttcg ccgtattttg aatcggcgcc cagcagaaag
     1261 cgtcctttcg ccacttcata ttcgaaactc gcccgggtca aaggcaatgc catatcgccc
     1321 gggacttgca gcgcatgctg gatgccgtgc gccgccgcga gatcctggta acccagcgtg
     1381 cccgacgcgc cgttccatga ggccttcagc acggtcgcat cgccgaaatc gtacgctccg
     1441 gcaaacacag ccgttccgat ggtgatcgtt ccgcgcagat aaccggcaaa cgatcgcttt
     1501 ccatttgcct cggttcgaac cgtgaggtcg aggttcgtat caacatcgtg cgtttgagtt
     1561 ccgagctgca ccggcgtcgg cacggtgctg gcgccggtga acattgcggc cccggtcgcg
     1621 aaatcgtaat tgaaatcaag attgccgagc gaaaagctgg gcagatgatc cggaaggtca
     1681 aggccaaact tcccgaatac ctccgtcacc accgcggtaa agttgatcgc tagtcctcca
     1741 ccagtcttcg cgtcgatcgt ccagccgccg gacttgtcgg aaagcgtgaa gggtaagttc
     1801 gtggcggcga ttgacagctg gccgtcgatt tcaagatcaa gtttcttcgc gccgagatcg
     1861 tcggtaaatg aaaccgcagt cagcgtcagg tcccagggcg gcggatttga cagcgcgctg
     1921 gtaagaccga aagccgcaaa cagatctggc gattttagcg gcccgcccgc cgctgaccac
     1981 ttgcccgaaa acagcgtgag ttctgccgcc gttgcattgc caccgccctg gaactcgatc
     2041 gtcgcggtga ttccgtcaag caatcccgat ttgccggttc cgctgacgga aaattttccg
     2101 tcgctgatcg gtgtgatttt caggcccgag tagagagaaa gttcatgaac aaacgggagg
     2161 tgagttacga gctcaggaag gccgccgcac ttgtccgcca aatcccaaag attcagtttt
     2221 ccgccccggg cgagagattg tacggcgctg tagagttctt ccaatgacat gtcaaagcac
     2281 ggccaatggg tacgacggaa cgccggagca acgcacggaa cgacgctgct attcgagagc
     2341 taacgcaaac tcctatttcg cgggaacctg tggatgcttg gctaaaggca gggcgcagaa
     2401 tagtcggatt acgattttgc gtcaatggtt tgttttagag gttgctgcga ccggtaaccc
     2461 actgcataag ttcagtgcaa ggcgcgttag aagaaccgaa aatcgggcta gacggcggca
     2521 gttgcggctt cgcaggaatc gagcacaggc gcttcgatga tttcgcctgg aggacggcct
     2581 tcgccgtagt agggacgacc gttattgatg gcttcgaagt attccgagat gcgtccgaga
     2641 atttcttcga ctgaatgtga atgatagagc gcggtgcgaa acagcgcgcc gccctgcaag
     2701 ccgcgcgtaa actgtccggc caactgtttc atccttccca tcgccgcaat cttcggcatg
     2761 tcctgttgca gcatttcaaa gtactcgagc agcagcgtgc gcttgtcttc cagtgtcggt
     2821 tgaaa
//
LOCUS       DATDBY010000469         2435 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2116737, whole genome shotgun sequence.
ACCESSION   DATDBY010000469 DATDBY010000000
VERSION     DATDBY010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2116737"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1244)
                     /locus_tag="VIT19_08730"
     CDS             complement(<1..1244)
                     /locus_tag="VIT19_08730"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016693.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY5839106.1"
                     /translation="MTANTNYDVIVIGGGPAGSSVASILAREGCKVVLFEKEKFPRHH
                     IGESLMTDTYWTFQRMGFLEKLKSSAFTQKYSVQFANQAGKESHPFYFFEAVHNESAV
                     TWQVTRAVFDKMLMEHAAEQGAHVHQGVAVKQVLFELDKATGVEVEMPDGLRQSFFAK
                     VIVDATGQSAMLSNKFRWRVRDPKLKKAVLYTYYKGAHREKDLNGGATLVLRTPKGSE
                     GWFWYIPLEDDITSVGIVANADYLLKGRGQDLAKIFEEEVQKTESCRRRVAEGERVDK
                     IYSILDYSYRSKKNAGNGFMIIGDAYGFLDPIYSSGVLLALKMAELAADAIHDAFRHD
                     DFSAERLGQFQPKLDRGIESMRKLVYAFYNEGFSFAQFLRKYPEHRVSIINLLIGDVF
                     KDGVDEVYGPMSEFAEIPPPLY"
     gene            complement(1250..>2435)
                     /locus_tag="VIT19_08735"
     CDS             complement(1250..>2435)
                     /locus_tag="VIT19_08735"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="coproporphyrinogen-III oxidase family protein"
                     /protein_id="HEY5839107.1"
                     /translation="VDDPLGLYIHIPFCRKRCKFCYFKVYTDKNASDIEIYLDALIKE
                     NELYSRTPAFQGRQLRFAYFGGGTPSYISEKQLHYLVDGLNRHVSWENAEEVTFECEP
                     GTLQKSKLQALKEIGVTRLSLGIEHFDDQILEANGRAHLSPEIYRAYGWAREVGFPQI
                     NIDLIAGMRGETEEKWRDTVRRALELEADSVTIYQMELPYNTVISQEMIKEGSASPIA
                     GWETKRRWLNYAFEQFQERGYEIASATVLTKTSKPCRFIYTDALWHGGDMIGLGVASF
                     SHFGGVNFQNVHNFEEYVRVLKTDNLPLLRAVTLTAKQRLIREMILQLKTGSLDTGYF
                     LNKFGVDVWREFQRVYERLDVEDLLNRQNGTIKLTRRGLLEVDEILWEFFEPELKTVR
                     YA"
BASE COUNT          549 a          683 c          626 g          577 t
ORIGIN      
        1 tcgtacagcg gcggtggaat ctcggcaaat tctgacattg ggccatagac ctcatcaacg
       61 ccatccttga aaacgtcgcc gatcaagagg ttgataatgc tcacccggtg ttcagggtat
      121 ttccgcagga actgtgcgaa gctgaatccc tcgttataga acgcgtaaac cagcttgcgc
      181 atcgattcga tgcctcgatc caactttggc tgaaactgtc ccagacgctc ggctgagaag
      241 tcgtcgtggc ggaaggcgtc atggatcgcg tcggcggcca gctcggccat cttaagcgcc
      301 agcagaacac cggaggaata gatgggatcg agaaagccgt acgcgtcgcc gataatcatg
      361 aatccattgc cggcgttctt cttcgagcga tatgagtagt caaggattga ataaatttta
      421 tcgacgcgct caccctcggc cacgcgccgg cggcagcttt cggtcttctg aacttcctct
      481 tcaaaaatct tcgccaaatc ctgaccgcgc cccttgagca aataatcagc gttggcgacg
      541 atgccgacac tggtgatgtc atcttcgagc ggaatgtacc agaaccagcc ttcgcttcct
      601 ttcggagtgc gcaataccag cgtggcgccg ccgttaagat ctttttcccg atgagcgcct
      661 ttgtaatagg tgtaaaggac tgccttcttg agcttcggat cgcgcacgcg ccaacgaaat
      721 ttgttcgaca acatcgcact ctggccggtc gcatcgacta tgactttggc gaagaacgac
      781 tggcgcagcc cgtcaggcat ttccacctca acaccagtgg ccttgtcgag ctcgaagagc
      841 acctgtttga cggcgactcc ctgatgaacg tgggcaccct gctcagctgc gtgttccatc
      901 agcatcttgt cgaagactgc gcgggtgact tgccaggtga ccgcgctctc attgtgcacg
      961 gcttcgaaga aataaaaggg gtgtgattct ttcccggcct ggttggcaaa ctggacactg
     1021 tatttttgcg tgaacgcact cgacttaagc ttttccaaaa agcccatgcg ctgaaaggtc
     1081 cagtaggtgt ccgtcatcaa ggattcgccg atgtgatgac ggggaaattt ttccttttca
     1141 aatagcacga ccttgcagcc ttcccgcgcg agaatgctgg cgaccgagct accggcggga
     1201 ccgccgccga ttacaataac gtcgtaatta gtattagctg tcatctggtt taagcgtaac
     1261 gaacagtctt taattcaggt tcaaaaaact cccaaagaat ttcatccact tcgagcaacc
     1321 cgcgccgcgt cagcttgatc gttccgttct gtcgattgag taagtcttcg acatccagcc
     1381 gctcataaac acgctgaaat tcgcgccaca cgtccacgcc gaacttatta agaaaatatc
     1441 cggtgtccaa tgatccggtt ttcagttgga ggatcatctc ccgaatcaag cgctgtttcg
     1501 ccgtcaaagt caccgcccgc aacaggggca aattatcggt cttcaggacg cgaacatact
     1561 cctcgaagtt gtgcacgttc tgaaaattca ccccgccgaa atgcgagaac gatgcgacgc
     1621 cgagtccgat catgtcaccg ccatgccaga gtgcgtcggt gtagatgaag cggcatggct
     1681 tactggtttt agttaacaca gtggcgctgg cgatctcgta accacgttcc tgaaactgct
     1741 cgaacgcgta gttcaaccaa cggcgtttcg tctcccaacc ggcgatcggc gacgcgcttc
     1801 cctctttgat catctcctgc gaaatgacgg tgttataagg aagctccatc tggtaaatcg
     1861 tcaccgagtc ggcctcgagt tctaaggctc gccggactgt atcgcgccat ttctcttccg
     1921 tctcgcccct catccccgcg atcagatcga tgttgatttg cggaaagccc acttcacgcg
     1981 cccaaccgta agcacgataa atctcaggcg acaggtgcgc gcggccgttt gcctcgagga
     2041 tctgatcgtc gaagtgttca atcccgagac tcaggcgggt gaccccgatc tctttaaggg
     2101 cttgaagctt cgatttctgc aacgtgccgg gctcgcattc gaacgtgact tcttcggcat
     2161 tttcccaact gacgtggcga ttgagtccat cgaccaggta atgaagctgc ttttcgctga
     2221 tgtaagaggg cgtgccgccg ccgaagtaag cgaatctcag ttgccggcct tgaaacgcgg
     2281 gcgtgcggct atacagttcg ttttccttta tcagcgcatc cagatagatc tcgatgtcgg
     2341 acgcgttctt gtccgtatag actttgaaat agcaaaactt gcagcgcttg cgacagaaag
     2401 gaatgtggat gtagaggccg agcggatcat ccacc
//
LOCUS       DATDBY010000470         2367 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2269354, whole genome shotgun sequence.
ACCESSION   DATDBY010000470 DATDBY010000000
VERSION     DATDBY010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2269354"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..591)
                     /locus_tag="VIT19_08740"
     CDS             complement(<1..591)
                     /locus_tag="VIT19_08740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839108.1"
                     /translation="MKKFLALFALVSVALACNLMNRKGSNTNSSSSSGTSTTSDGEPV
                     EKANPTAAQQAAIANGQTVTWEQQGITWTLPANWKKIDARNESASYGGNGAFLTVAVS
                     IMPQMASLVDTSIKAMYQGAKTEQKVGKYDEVRWLELDGVRGVTFRQSVQERPDDIRR
                     LEWQAYRTYAGSTQLITMILSTNSGDFAKHQDALYGV"
     gene            771..1667
                     /locus_tag="VIT19_08745"
     CDS             771..1667
                     /locus_tag="VIT19_08745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839109.1"
                     /translation="MFTNTKRIVLRIGLLGAAASLLFLIGCQPAANTNVNVNVNANAS
                     PSNANANTNSSSTTSGLDTAEPEKYSATLVFTLQTSGGDKAMGIPPLAVQVARNAADR
                     RVEFKLPDGTPLVYLDHDNRHYVIVPSKKQYAELSKESTGAQLQKLMTPGQIVADLKN
                     KSGVEKVGEEQINGRTAEKYRYAASKDTKTQAGEVTAEAFVFIDKETRLPLRTEVNAE
                     SSGEVKGVNAARIVAEMRDLKTDVDAAQFQIPEGYSQVAPEKIKQQIDALTNAVASIL
                     RAIMSNMQVGSSPSPSPTGSPK"
     gene            1669..>2367
                     /locus_tag="VIT19_08750"
     CDS             1669..>2367
                     /locus_tag="VIT19_08750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839110.1"
                     /translation="MKRVLLGLVAGLLIGVLATLYYFGRSGKASLPGTPLRPPDATAA
                     NAGSVSVTLEEKFFDALLGTIFQQLGPPQLKLGQLSSEPAFQTIAFQDACSNVVILNA
                     ESGSVKTGVRFTGGKIVVPLAFTGSYSVLGKCIQFKGTGKATVELSFEQTRQTVFGAL
                     IMEEVNLENVPPLISAFVTAFVRQTIAAQVNPFEVLRASQLALSLPIKTTGGSVKANV
                     KDVRSEVQEGSLRIV"
BASE COUNT          537 a          690 c          656 g          484 t
ORIGIN      
        1 cacgccgtac agcgcatcct gatgcttcgc aaagtcgccc gagttcgtgg aaagaatcat
       61 cgtgatgagc tgagtgctgc ccgcatatgt acgataggcc tgccattcca gacggcgaat
      121 gtcatcgggc ctctcctgca cagattggcg gaacgttacg ccgcgtacac cgtccagctc
      181 aagccagcgc acctcgtcat acttaccgac cttttgctca gtcttcgcgc cttggtacat
      241 cgctttaatg ctcgtatcaa ccaagctcgc catctgcggc atgatcgaaa ccgctaccgt
      301 cagaaacgcg ccgttgccgc cgtaactggc tgactcgttc cgcgcatcga tctttttcca
      361 gttggcggga agcgtccagg taatcccctg ctgctcccag gtgacggttt gaccgttggc
      421 gatcgcggcc tgctgagcgg ccgtcggatt cgccttctcc acgggttcac cgtctgaagt
      481 cgtcgatgtg ccgcttgacg aagaggaatt tgtgttgctc cccttccggt tcattaagtt
      541 gcacgccagc gccacggata ctagcgcaaa gagcgccagg aattttttca ttcgaattgc
      601 acctttttcg gaaacttgaa aatcacacgc gttttacgac agtgccgcat cagtgtcaat
      661 gcgggccgat ttcggaagtc ctcgtccggc gtgctattct tactccacaa aaccccccgt
      721 aacacaatca ttttaaccaa cgcgtgtgat gcgcgttttc agaggcacct atgtttacga
      781 acactaaacg aatagttttg agaatcggac tgcttggcgc cgcggcgtcc ttgctgtttt
      841 taatcggctg tcagccggcc gcaaatacga atgtgaacgt gaacgttaac gcgaacgcgt
      901 caccctcgaa tgcgaacgcc aacacaaact caagcagtac gacttcaggt ctggatactg
      961 cggaaccgga aaaatacagc gcgacgctcg tctttacact gcagacttcg ggcggcgaca
     1021 aggcgatggg cattccgccc ctggccgtgc aggttgcgcg aaatgctgcg gatcggcgcg
     1081 ttgaattcaa gttgccggac ggcaccccgc tggtttatct cgatcacgac aaccggcatt
     1141 acgtgattgt gcccagcaag aagcaatacg ccgagctgtc gaaggaatcg acgggagcgc
     1201 aactgcaaaa gctgatgacg cccggccaga tcgtcgctga cttgaaaaac aagagcggcg
     1261 tcgagaaagt cggcgaagag cagatcaacg ggcgcactgc tgaaaagtat cgctacgccg
     1321 cgtctaagga cacgaaaacc caagccggcg aagtaactgc cgaggcattc gtgttcatcg
     1381 acaaagaaac gcgcctgcct ttgcgcacgg aagtgaatgc ggaaagctcg ggcgaggtga
     1441 agggtgtcaa cgccgcgcgg atcgtggccg aaatgcgcga cctcaagacc gacgtggatg
     1501 cggcgcagtt ccagattccc gaaggatact cgcaggtggc gcctgagaag attaagcagc
     1561 agatcgatgc gctgacgaac gcggtagcct cgattttgcg cgccatcatg tcgaacatgc
     1621 aggtgggaag cagcccatcc ccgagcccga ccggctcgcc aaaataagat gaagcgcgta
     1681 cttctcggtc tggttgcggg gctgctgatc ggcgtcctcg caaccctgta ttacttcggc
     1741 aggtccggaa aggcgagcct gccgggaacc cctctgcgcc cgcccgatgc gaccgcggcg
     1801 aacgcgggtt cggtgtcagt cacactcgaa gagaaattct ttgacgcgct gctcggcacg
     1861 atctttcagc aacttggtcc accacaatta aagctgggac agctttcgtc cgaaccggcc
     1921 tttcaaacga ttgcgtttca ggacgcgtgc agcaacgtgg tcatcttgaa tgctgagagt
     1981 ggcagcgtga aaaccggcgt gcgattcacc gggggaaaga ttgtcgtgcc gctggcattc
     2041 accggcagct acagcgtgct cggaaaatgc attcaattca aaggcacggg caaggccacg
     2101 gttgagctgt ctttcgagca aaccaggcaa accgtattcg gcgcgctcat catggaagaa
     2161 gtgaacctcg agaacgttcc gccgctcatc agcgcattcg tcaccgcgtt cgtccggcaa
     2221 accatcgccg cgcaagtgaa tccattcgaa gtcctccgtg cttctcaact cgctttgtcg
     2281 cttccaatca aaacgaccgg cggctcagtc aaagccaacg tcaaggacgt gcgatccgaa
     2341 gtccaggaag gttcgctgcg aatcgtg
//
LOCUS       DATDBY010000471         2896 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2287328, whole genome shotgun sequence.
ACCESSION   DATDBY010000471 DATDBY010000000
VERSION     DATDBY010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2896
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2287328"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            18..1145
                     /gene="recF"
                     /locus_tag="VIT19_08755"
     CDS             18..1145
                     /gene="recF"
                     /locus_tag="VIT19_08755"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="All proteins in this family for which functions are
                     known are DNA-binding proteins that assist the
                     filamentation of RecA onto DNA for the initiation of
                     recombination or recombinational repair; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication and repair protein RecF"
                     /protein_id="HEY5839111.1"
                     /translation="MFLRSIAAIQFRNLSGEITWGNGLNILHGNNAQGKTNWLEAVYL
                     LAHAKSFRTHHLKETVQFGERDAVVKGVVSTGKDFERELQVSLSGTTKQTLINGKRES
                     IARYAAHLYAVCFTADELEVIRGGPEARRSFLDRGAISLHPPFAQTIADYNKVIKQKK
                     RLLQQAAEDRVTLDALANLVQPWNEQLISLATQIHRARIRYVELLNEALDHNLFHDDI
                     SIRYVSSLEGKGDLADYRSLITARLQIRMEAELFAGACLIGPHRDDLLVLFGGRDIRS
                     FGSSGQQRSALITLDLAAISVYYSKHQNYPIFLIDDVDAELDGNRINRLLEYLDGRTQ
                     TFITTSKRSHFERFESRANFYEVCAGVATAEQTLSAVSVSA"
     gene            1190..>2896
                     /locus_tag="VIT19_08760"
     CDS             1190..>2896
                     /locus_tag="VIT19_08760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012535740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HEY5839112.1"
                     /translation="MATPTSKLKNKKETYDASTIAVLEGREAVRKRPAMYIGSTGELG
                     LHHLVYEVVDNSIDEALAGYCDAVEVMIHMDNSITVIDNGRGIPVDMMKKEKKSAAEV
                     VMTKLHAGGKFDSNAYKVSGGLHGVGVSCVNFLAETLHLEIWRDGLTYEQEYERGIAV
                     ASLKQTGKTRKRGTKITFKPDSQIFDTTEFSFDKLSERLREKAFLNKGIRIIIKDERE
                     EPEKSHEFYYRGGIAEFVKHLNKNRNVLHDKPIYFEKVADALSIEVAIQYNDGYDEKV
                     YSFANNINTVDGGTHLSGFRSAFTRTINAYAQSSGLAKNFKGSLTGDDVREGLVAVIS
                     CKLPQPQFEGQTKGKLNSDVKGAVESFLNERLTDFLQQNPTVARRIVGKSTDAARARE
                     AARKAREIVRKGALGSTMLPGKLADCQEKDPALSEIYIVEGDSAGGSAKQGRDRKNQA
                     ILPLKGKILNVEKAREDKMLAHGEIKALIMALGTGFGRKSDTGKDDRDGFDVNKLRYH
                     KIILMTDADVDGSHIRTLLLTFFFRQMPQLVEQGFVYIAQPPLYKVKRGKKEEYIKDE
                     TGM"
BASE COUNT          745 a          780 c          769 g          602 t
ORIGIN      
        1 tatgctaaaa ttcatcgatg tttctcaggt caatcgccgc aatccagttc cggaatttgt
       61 ctggcgagat tacctgggga aacggcctca acatccttca cggaaacaac gctcaaggta
      121 aaacgaattg gctcgaagcg gtttacctgc tggcgcacgc aaagtcgttt cgcacgcatc
      181 atctcaaaga aacagttcag ttcggcgagc gcgacgctgt cgtaaaaggc gtcgtcagca
      241 ctggaaaaga tttcgaacgt gaacttcagg tcagcctcag cggaacaacc aaacaaacgc
      301 tgatcaacgg taagcgcgaa tctatcgcgc gctatgccgc gcatctttat gctgtttgtt
      361 ttaccgcgga cgagctggaa gtaatccgtg gaggtccgga ggcccgccga agctttctcg
      421 atcgtggagc gatctcgctt catccaccct tcgcgcagac catcgctgac tacaacaaag
      481 tgatcaagca gaagaagcgt ctgctgcagc aagccgcgga ggaccgcgtc actctcgatg
      541 cgctcgcgaa tctcgtgcaa ccgtggaatg aacagctaat cagtctcgcc acccagattc
      601 atcgcgcgcg aattcgttac gtcgaactgc tgaacgaagc gctcgatcac aatctctttc
      661 atgacgacat ctcaatccgt tacgtctcgt cgctcgaagg caaaggcgat ctcgcggatt
      721 accgatcgct tatcaccgct cggttgcaaa tcaggatgga ggcggaactc ttcgccggcg
      781 cctgcctgat cggtcctcat cgcgacgatc ttctggtgct tttcggtggc cgcgacatac
      841 gtagttttgg cagctctggc caacagcgta gcgcattgat aacacttgat ttagcggcga
      901 tttccgtgta ctattcgaag catcagaatt acccgatttt cctcattgat gacgtggacg
      961 ctgaactcga cggaaaccgc attaaccgct tgctggaata cctcgacgga cgcactcaaa
     1021 ccttcatcac aacatcaaag agaagtcact ttgagcggtt cgagagccgg gcgaattttt
     1081 atgaagtctg cgccggagtt gcgactgcgg agcagacatt gagtgcagta tcagtgagcg
     1141 cgtgatgcta tctgaccaga acgacaagag cagtaaagga aacgacgact tggcgacacc
     1201 aacatcaaaa ctgaagaaca aaaaagagac ttacgacgct tcgacgatcg ccgttcttga
     1261 aggccgcgaa gccgtgcgca aacggcccgc gatgtatatc ggatcgaccg gcgagttggg
     1321 actccatcac ctggtttatg aagtggtcga taattcgatc gacgaagcgc tcgccggtta
     1381 ttgcgatgcg gttgaagtga tgattcacat ggacaactcg atcacggtca ttgataacgg
     1441 ccgcggcatc ccggtggaca tgatgaaaaa ggaaaagaag tcggccgccg aagtcgtcat
     1501 gaccaagttg catgccggtg gaaagttcga ctcgaacgcc tacaaggtgt cgggcggact
     1561 gcacggcgtc ggtgtctcgt gcgtcaactt cctggccgaa actcttcatt tggaaatttg
     1621 gcgcgatggc ctgacatacg aacaggaata cgagcgcgga atcgcagttg cgagtttgaa
     1681 acagacgggc aagacgcgca aacgcggcac gaagattact ttcaaacctg actcgcaaat
     1741 cttcgatacg actgaattca gtttcgacaa attgtcagag cggctgcgcg aaaaagcgtt
     1801 cctcaacaaa ggcattcgca tcatcatcaa ggacgagcgc gaagagcctg agaaatcgca
     1861 cgagttctac tatcgcggcg gtatcgccga attcgtgaag cacctgaata agaaccgtaa
     1921 cgtgctgcac gacaaaccga tctatttcga aaaggtcgcc gacgcgctct cgatcgaagt
     1981 cgcgattcaa tacaacgacg gctacgacga aaaggtctat tcgttcgcga acaacatcaa
     2041 caccgtcgac ggtggcacgc acctctccgg atttcgctca gcgttcaccc gcacgatcaa
     2101 cgcttacgcg caatcttccg gcttggcgaa aaacttcaaa ggctctttaa ccggcgacga
     2161 cgtgcgcgag ggcctggtcg ccgtcatctc atgcaaactg ccgcagccgc agttcgaggg
     2221 ccagacaaaa ggcaagctca attcagatgt taagggcgcc gtcgagtctt ttctgaatga
     2281 acgtctgacg gattttcttc agcagaaccc gacggtcgcg cgccgcattg tcggcaaatc
     2341 taccgacgct gctcgtgccc gtgaagcagc tcgtaaggcc cgcgaaattg tgcgtaaagg
     2401 tgcgctgggc tcgaccatgt tgccgggcaa actggccgac tgccaggaga aagatcccgc
     2461 actctcagaa atttacatcg ttgagggcga ttcggccggc ggttcagcca agcagggccg
     2521 cgaccgaaag aaccaggcga ttctgccttt gaagggcaag attctgaatg tggaaaaagc
     2581 gcgtgaagac aaaatgctcg cgcacggaga aatcaaagcg ctgattatgg cgctcggtac
     2641 cggctttggc cgcaagagtg acaccggcaa agacgatcgc gacggtttcg acgtcaacaa
     2701 acttcgttat cacaagatca tcctgatgac tgatgccgat gttgacggct ctcacattcg
     2761 cacgctgctg ctgactttct tctttcgcca aatgccgcaa ctggtcgaac agggttttgt
     2821 ctatatcgcc cagccgccgc tctacaaagt taagcgaggt aagaaggaag aatacataaa
     2881 agatgaaacc ggcatg
//
LOCUS       DATDBY010000472         2195 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_245409, whole genome shotgun sequence.
ACCESSION   DATDBY010000472 DATDBY010000000
VERSION     DATDBY010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245409"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..1166
                     /locus_tag="VIT19_08765"
     CDS             54..1166
                     /locus_tag="VIT19_08765"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839113.1"
                     /translation="MSDQKSTSNEKAAAKPRHSKAAAKNGDTVKKLRVMVLCHEDLVP
                     PDSVDDLTPKEIAPFKTEWDVISTLKKMGHEVLPVGVYNNLGVIGNGLLEFKPHIAFN
                     LLEEFHGYPLYDQHVVSYLELMKQPYTGCNPRGLTICRDKALSKMVLAYHRIHVPAFA
                     VFHMNRVVKRSKRLKFPLLVKSISEEGSVGIARASIVNDDEKLAERVEFIHRQTKTHA
                     IAEQYIAGREIYVGVLGNQRLQCYTPWELVIEKLPEGAPNIATSKLKWDPAYQEKVGV
                     VTKAADIDKKMREKIERLSKKIYRTLFLSGYARLDYRVTDAGQIFLLEANPNPQIALN
                     EDFADSAQDCGVDYETLLQKIMAAGLRYRTAPEQAK"
     gene            complement(1224..1589)
                     /locus_tag="VIT19_08770"
     CDS             complement(1224..1589)
                     /locus_tag="VIT19_08770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839114.1"
                     /translation="MKTYLFRSFVAVIVLALGTVTAFADKVKKVTLSLADDVMVSGTL
                     VKAGTYDFRFNHDTGELSILKEGKVQAKTTARLEQRSDKARYTAVRTRQAGSVNEFTG
                     LVFDGQKQEVVVTSAATIR"
     gene            complement(1793..>2195)
                     /locus_tag="VIT19_08775"
     CDS             complement(1793..>2195)
                     /locus_tag="VIT19_08775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839115.1"
                     /translation="PTPAVMAQQSEKFYRDKIRSGYRAPYLKELVQRVASGELKVETW
                     LHAQLPHDQFMKELKCVKGVGNYAAENLLKLLGRYDGLALDSWTRAQFAKLRNQSRKA
                     SDKKIARFYSRFNSWRGLALWCDMTRLWLEP"
BASE COUNT          528 a          603 c          585 g          479 t
ORIGIN      
        1 cgctctaaat gtggagggcg gtcccgacac aacgggatcg ccgctttgaa tcagtgagcg
       61 atcagaagtc aacgagcaat gaaaaagcgg cggcgaagcc gcggcactcc aaagccgccg
      121 ccaaaaacgg cgacacggtc aagaaactgc gcgtgatggt cctatgtcac gaagacctcg
      181 tgccgccgga ttccgtcgac gacctgacgc ctaaagaaat tgcgcccttc aaaactgagt
      241 gggacgtgat ttcgacgctg aagaagatgg gccatgaagt tctaccggtc ggcgtttaca
      301 acaatctcgg tgttatcggt aacgggctcc tcgaattcaa accgcacatt gcgttcaatt
      361 tgttggaaga gtttcacgga tatcccctct acgatcagca tgtcgtcagc tatctcgaac
      421 tgatgaaaca gccctacacc ggttgcaatc cccgggggct gacaatctgt cgcgacaagg
      481 cactgtcaaa aatggtcctc gcctaccatc gcattcacgt gccggcattc gccgtctttc
      541 atatgaaccg ggtggtgaaa cgatcgaagc gactgaagtt tccgctgctg gtgaagtcga
      601 tcagcgaaga aggatcagtc gggattgcgc gcgcgtcgat cgtgaacgac gatgagaagc
      661 tggccgagcg cgtcgagttc atccatcgcc agacaaagac gcatgcgatt gctgagcagt
      721 acattgccgg ccgcgaaatt tatgtcggcg tcctcggcaa tcaacggctg caatgctaca
      781 cgccgtggga attggtgatt gaaaaactgc cggaaggcgc gccgaacatt gccacttcca
      841 aactgaaatg ggatccggcc taccaggaga aagtcggcgt ggtcacaaag gccgcggaca
      901 ttgataagaa aatgcgtgag aagatcgagc ggctatcgaa gaagatttac cgcacgctgt
      961 ttctgagtgg ttacgcgcgc ctggactatc gcgtcaccga cgccgggcag atcttcctgc
     1021 tcgaagcaaa tccaaatccg cagatcgctt tgaacgaaga tttcgctgac tcagcccagg
     1081 actgcggagt tgattacgaa acgctcctgc aaaagataat ggcggcggga cttagatatc
     1141 gaacggcgcc tgagcaggca aaatagaaaa gcgccccgat gaaccatcga agcgccttct
     1201 gttttgtttg aaccagcggc cggttaacga atcgtcgcgg ctgacgtcac gacaacttcc
     1261 tgcttttgcc cgtcgaaaac caggcccgtg aattcgttca cactgcctgc ctggcgcgtg
     1321 cgaactgccg tgtaccgggc tttatcgctt cgctgttcca aacgtgctgt ggtttttgcc
     1381 tggacctttc cctctttgag aatggaaagc tcgccggtgt catgattaaa acggaagtcg
     1441 taggttcccg ccttgaccaa agtgccgctc accatcacat catcggccaa cgatagtgtg
     1501 actttcttga ccttgtccgc gaacgcggta actgtcccga gcgccaacac gattactgca
     1561 acgaacgacc gaaatagata cgttttcatt ttcttactct ccctgtttca agcacttcaa
     1621 aatcggttcg aacaacctgc gtcggtcgtt cctatgtgaa ggatgtaacg cggcagcggt
     1681 ctgcgaagtt tcaaaaactt ctttagatcc aatcacttgg atgatcgatc cagattgatg
     1741 gaagatgacg cgcaggcgag accgtccggc acgcgattag gcttttgcgc cctcagggtt
     1801 ccagccaaag gcgagtcata tcgcaccaca gcgctagtcc gcgccaagag ttgaagcgcg
     1861 aataaaagcg cgcaatcttc ttgtcgctgg ccttgcggct ctgattccgc aattttgcga
     1921 actgcgcgcg ggtccaggaa tccagcgcca atccgtcgta acgtcccagc aacttcaaca
     1981 ggttctcagc ggcgtaattt ccgacgcctt tcacgcactt cagctctttc atgaattgat
     2041 cgtgtgggag ttgagcgtgc agccaggtct cgaccttcaa ttcgcctgaa gcgacgcgtt
     2101 ggaccagctc tttcaaatac ggcgcgcgat aacctgagcg aatcttatcg cgataaaact
     2161 tctcagattg ctgagccatc actgcgggcg tggga
//
LOCUS       DATDBY010000473         2206 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_270796, whole genome shotgun sequence.
ACCESSION   DATDBY010000473 DATDBY010000000
VERSION     DATDBY010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_270796"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..609)
                     /locus_tag="VIT19_08780"
     CDS             complement(<1..609)
                     /locus_tag="VIT19_08780"
                     /inference="COORDINATES: protein motif:HMM:NF015522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839116.1"
                     /translation="MDFTELIDLASERLGGTVLYANDEFFAPKENLLKASVPAFIEGK
                     YTDLGKWMDGWESRRRRTPGFDWCIIRLGLAGVIRGVVVDTAHFKGNYPEQCSIEACA
                     VDGLPTTEQLIDGSQQWTGILPRVNLNGDSQNPFPVTSDERWTHLRFNIHPDGGVARL
                     RVYGEVAPQWNRLRQIGGDVDLAAVEHGGMVLTCSDMFFGHRH"
     gene            complement(711..2084)
                     /gene="allB"
                     /locus_tag="VIT19_08785"
     CDS             complement(711..2084)
                     /gene="allB"
                     /locus_tag="VIT19_08785"
                     /EC_number="3.5.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR03178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004038 - allantoinase activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0050897 - cobalt ion binding [Evidence
                     IEA];
                     GO_process: GO:0000256 - allantoin catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="allantoinase AllB"
                     /protein_id="HEY5839117.1"
                     /translation="MHPPDLVIRGRRVVTEHGVGPASVHVTRGYISSISIFEDAPEGA
                     ELVEAFDSIVMPGLVDTHVHVNEPGRTDWEGFETATRAAAAGGVTTIVDMPLNSIPAT
                     TTPDAFDAKLKAATGKLHVDTAFWGGVVPGNTSELAKLWDAGVVGFKCFLIHSGVDEF
                     PNVTEQDLREAMPELARLGALLIVHAEVPGPVEACCRSASEAPARSYETFLRSRPRAA
                     ENEAIATMIRVARETGCRVHVVHHSSADALPMLRQAKSFGLPITAETCPHYLHFAAEE
                     IPDGATEFKCCPPIRESENREHLWDALRDGTIDFVVSDHSPCPPDMKLPDEGDFMNAW
                     GGISSLQLRLPIMWTEAIGRGFAIEDLVRWLCHEPARQVGLKIKGAIKDGFDADIVIW
                     NPDREFKVEPAMLHHRHKLTPYNGEVLRGTVEKTFLRGQMVYDDGRFFGPYGRPVLPE
                     RSQYRER"
BASE COUNT          467 a          664 c          638 g          437 t
ORIGIN      
        1 gtgccggtgg ccgaagaaca tgtcgctgca agtgagcacc attccgccat gctcgacggc
       61 cgcgagatcg acatcaccac cgatttgccg caagcggttc cattgcgggg ccacctcgcc
      121 gtacacgcgc agacgcgcca caccgccgtc cgggtgaatg ttgaatcgca ggtgcgtcca
      181 acgttcgtcg ctggttaccg ggaatgggtt ctgcgaatcg ccgttcagat ttactcgcgg
      241 cagaatcccg gtccattgct gcgagccgtc gatcaactgt tcggtagtgg gcaggccatc
      301 gaccgcgcag gcttcaatcg agcactgctc gggataattg cctttgaagt gggcggtatc
      361 gactacgact ccacgaatta cacccgcgag ccccaaacga atgatgcacc agtcgaatcc
      421 gggtgtgcgc cggcgccgag actcccagcc gtccatccat ttgccgagat cggtgtactt
      481 gccttcgatg aaagcaggaa ccgaagcttt cagcagattc tctttgggcg caaagaattc
      541 gtcattggcg tacagcacgg tcccgccgag tcgttcggat gccaggtcaa ttagttcagt
      601 gaagtccata agaacttgac ggccgcatgc cttgaggtca gtaccgggag cggtagcgac
      661 cgggtagcgt cattggaaac tcgaccgttg cgatgcttga gacccggtcg ctaccgctcc
      721 cggtactgac ttcgctcagg caagaccggg cgaccgtacg gcccgaaaaa tcgcccgtca
      781 tcataaacca tctgtccgcg caggaaagtt ttttctaccg tcccgcgcag aacttcgcca
      841 ttgtacggag tcaacttgtg ccggtgatgc agcatcgcgg gctcgacttt gaattcccga
      901 tccggattcc agatgacgat gtcggcatca aagccgtctt taatcgcgcc tttaattttg
      961 agaccaactt gccgggccgg ttcgtggcat agccagcgaa ccaggtcttc aatcgcgaag
     1021 ccgcggccga ttgcctcggt ccacataatc ggcaagcgca actgaagaga cgagattccg
     1081 ccccaggcat tcatgaaatc gccttcatca ggcagtttca tgtcaggcgg acacggcgaa
     1141 tggtcggaaa cgacgaaatc gatcgtgccg tcgcggaggg cgtcccagag gtgttcgcgg
     1201 ttttcacttt cacgaatggg cgggcaacac ttgaattcag tggctccatc aggaatttct
     1261 tccgcggcaa agtgcagata atgagggcag gtttcagccg tgatcggcag cccgaaactc
     1321 ttcgcctggc gcagcattgg caaagcgtct gccgacgaat gatgcacgac gtggacgcga
     1381 cagccggtct cgcgggccac gcgaatcatc gtcgcaatcg cttcgttttc cgctgcccgc
     1441 gggcgtgaac gcagaaaggt ctcatatgac cgggcaggcg cttcggatgc cgaccgacag
     1501 catgcttcaa ccggccccgg cacttcagcg tgaacaatca gaagcgcgcc gagccgcgcc
     1561 aactcaggca tggcctcgcg caaatcctgt tcggtgacat tcggaaactc atcaacgccg
     1621 gaatgaatca gaaagcactt gaagccgaca acgccggcat cccaaagctt tgccaactcg
     1681 ctcgtgtttc ccggaacgac gccgccccag aacgcagtgt ccacgtgcag cttgcccgtc
     1741 gcggctttta acttcgcgtc gaaagcgtcg ggcgttgtcg ttgccggaat agaatttaga
     1801 ggcatatcca cgatcgtcgt gacacctccg gctgctgccg cccgcgtcgc cgtctcgaat
     1861 ccttcccaat cggtgcggcc aggttcgttg acgtgtacgt gcgtgtcgac caggccgggc
     1921 atcacgatcg agtcgaatgc ttcgaccagt tcggcgcctt cgggtgcgtc ttcgaaaatc
     1981 gaaatggaag agatgtagcc gcgcgttaca tgcactgacg ccgggccgac tccatgttcg
     2041 gtaacgaccc ggcgtccgcg gattacgagg tccggcggat gcattaggcc gcccagcttc
     2101 cgggtggcgg tggcggcaca ggggcaccaa tcggaccggt ttcaggaaaa actcttcgat
     2161 aagccacggc gtaggccgcg aaactgattg gcatcacaaa gaaaac
//
LOCUS       DATDBY010000474         4880 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1262321, whole genome shotgun sequence.
ACCESSION   DATDBY010000474 DATDBY010000000
VERSION     DATDBY010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4880
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1262321"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(205..1509)
                     /locus_tag="VIT19_08790"
     CDS             complement(205..1509)
                     /locus_tag="VIT19_08790"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEY5839118.1"
                     /translation="MSTPELKSSQSDTVRKHKEFLFPAVATYYEEPLALVKGEGAHVW
                     DDKGDKYLDCFGGVLTVSVGHANPRVNEAIINQVNTISHTSTLYCNQPQSDLAEKLAQ
                     ITPGRLKKSFFTNSGTEADDTAVHAAKLATGRHEIVVLRHAYSGRSATSLSAMGHSTW
                     RPLPPQVGGFVHARAPYCYRCPFKLTYPECGLACANDIEELIMTTTTGEIAAFMAEPI
                     LGVGGFIVPPPGYFERAVEITRKHGGLFIADEVQTAWGRTGDKWFGIENWNVEPDIIT
                     SAKGLGNGTPIGITVATPEVADKFPGLTFSTFGGNPVSSAAALAVIKVIEDDDLKKNS
                     AVVGGYFREKLEGLKEKYPVIGDVRGMGLMQAVELVKDRETKEPDPQSVARVFEETRK
                     RHVLVGKGGLYGNVIRTGMMLNSTKDHVDELVEALDGAFAAA"
     gene            complement(1523..2065)
                     /locus_tag="VIT19_08795"
     CDS             complement(1523..2065)
                     /locus_tag="VIT19_08795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839119.1"
                     /translation="MKIMNLGLVVFCILGCAVSASAQSNRSVYTNLGEKSCRTIKADS
                     SNVGSYVGICGGVSGYKLQVEEGDLRQNIQVITPAGQKHSLDLWTVVGSNFSSLGNKA
                     EWRVRTQRGKVVPVALIVRYNLSSPEDSTKLTSYLAVAKITASKICVTDKIAPAADAN
                     VAARAAADNSADKPCLESSN"
     gene            complement(2096..2767)
                     /locus_tag="VIT19_08800"
     CDS             complement(2096..2767)
                     /locus_tag="VIT19_08800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839120.1"
                     /translation="MNQCPACSRVYSDVGLKFCLDDGTELVSTTTDSETPPTAVMSGS
                     EDNVPETIEASTPVIASPEPEISSPVVEPGTANRSLVPLLITIVVLLFIGAVILVAYM
                     VLPAGDNIFSYFLTRVVRRLPMLLLAIGGIVFAFMRWKLHPRASLMTVVALGIYLVDM
                     VVYTLLLYWLPSLVEPMRMSPSASRFFYSVVYFIEDIVFAVTLILLVAAAFANRKATP
                     GSKII"
     gene            complement(2844..3215)
                     /locus_tag="VIT19_08805"
     CDS             complement(2844..3215)
                     /locus_tag="VIT19_08805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839121.1"
                     /translation="MESSQLFNIFQSYLEQLPSFLALIAGIVFAMTRWKHHPRVAMVV
                     VIALGFLLFHMIVFTIVYNVVPRWVIRSSGSYEDFRTVIDRVYLILGLISNGAAAIAF
                     GGLLAAIFMRRRSEPVAETNL"
     gene            complement(3217..4197)
                     /locus_tag="VIT19_08810"
     CDS             complement(3217..4197)
                     /locus_tag="VIT19_08810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839122.1"
                     /translation="MELVLPTVPRSDIRPDGAIPSAFVDPIESFTKDGEIALLWTLKP
                     SKKSANPAWLTIVLEPAAQGLSPQEFRAFALKKFAKGAYDIKHVEHNGIPLARYTTGS
                     LAAGLYAAHGVSTLGAKDTARNLEAFLVGGETWARIKLTADSLGAEEERAFYSAVESA
                     RFVDTSNPATSFDYYSLGRSFSAKKDFARAAGYLASAITLEQNHAQLNAKHWRDLIMK
                     SAEAYVTTSRLPAAAQVLEYGVTRDPTNETFQMQLARTYASMGDMAKTLATLKTTFQL
                     MKKKKEIFEKTSFPGTTSHTMSLPDLNRDPAFKEMMKDKAFREAVKAFKN"
     gene            complement(4329..>4880)
                     /locus_tag="VIT19_08815"
     CDS             complement(4329..>4880)
                     /locus_tag="VIT19_08815"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY5839123.1"
                     /translation="MRIGHGNDPQTEMGPSVDESQFKTVLDYINIGREDGATMTCGGE
                     PATGNGLDKGYFVQPTVFDHVTPDMRIAREEIFGPVLSVLRVKDFEAAMQVANDTEFG
                     LSSSIFTNDAARIFRFVDEIETGMTHINSPTTGGEAHVPFGGIKGTGIGDREQGSTAL
                     DFYTELKVVYVDYTGRKREGNLY"
BASE COUNT         1086 a         1350 c         1325 g         1119 t
ORIGIN      
        1 agtcgactta tcaatgtgca taatcacgtt cagcccattg ggcagagtga attgctcaaa
       61 cttgaccgcc ggcaggttac cgccactttt tgattgagca gcagctaaac ccggcaggaa
      121 aagtgacagt cccaggacaa ccgcaagcaa tctcgttttt ctcattttca ttctccttta
      181 caagccagca ggtcataccg tgccctaggc agcggcgaaa gccccatcca atgcctcgac
      241 cagttcatcg acgtgatctt tcgtcgagtt cagcatcatg ccggtgcgga taacgttgcc
      301 gtaaaggccg cctttgccga ccagcacgtg acgtttccgg gtctcttcaa aaacgcgtgc
      361 gacagattgc ggatcgggtt ccttcgtttc gcgatccttc accagttcga ccgcctgcat
      421 cagccccatg ccgcgcacat cgccaatgac cgggtatttt tctttcaagc cctcgagctt
      481 ctcgcggaag taaccgccca caactgctga attctttttc agatcgtcgt cttcgatcac
      541 cttgatcacg gccagcgccg ccgccgacga aacgggattg ccgccgaatg ttgaaaatgt
      601 caggccggga aatttgtcgg caacttccgg cgtcgccacc gtgattccga tcggcgttcc
      661 attgcccaga cctttggcgg acgtgatgat gtccggctca acgttccaat tttcaatgcc
      721 gaaccatttg tcgccggtgc ggccccaggc cgtttgcact tcgtcagcga tgaagagccc
      781 gccatgcttg cgggtgattt ccaccgcgcg ttcgaagtaa cccggcggcg gcacgatgaa
      841 tccgccgaca ccgagaatcg gctcagccat gaaagcggcg atctcgcccg tcgtcgtcgt
      901 catgatcagc tcttcaatgt cgttcgcgca ggcgagtccg cattcggggt acgtaagctt
      961 gaacgggcag cgatagcaat acggcgcgcg cgcgtgcacg aaaccgccga cctgcggcgg
     1021 tagcggccgc caggtcgagt gtcccatagc agatagcgaa gttgcggaac gcccgctgta
     1081 agcgtgacgc agcacaacga tctcgtgacg gccggtcgcg agcttagctg cgtgaactgc
     1141 tgtgtcgtcg gcttcggtgc cactgtttgt gaagaaagat ttcttcaagc ggcccggcgt
     1201 aatctgcgcc agcttctcag ccaaatcgga ttgtggctgg ttgcaataaa gcgttgacgt
     1261 gtgcgagatg gtgttgactt gattgatgat ggcttcgttc acacgcggat tcgcgtgacc
     1321 aacgctcacc gtgagcacgc cgccgaaaca gtcgaggtat ttgtccccct tgtcgtccca
     1381 aacgtgagcg ccctcgcctt tcaccagggc cagcggctct tcgtaataag tcgcgactgc
     1441 cgggaaaaga aactctttat gtttgcgaac ggtgtcagac tgcgacgatt ttagttctgg
     1501 agtgctcatt attgatcctt ggttagttac tgctttcaag acagggctta tcggcagagt
     1561 tgtcagcggc ggcacgcgca gccacgtttg cgtccgcggc gggtgcgatt ttatccgtca
     1621 cgcaaatttt ggaagctgta attttggcga ccgccaggta ggatgtcagc tttgtggaat
     1681 cctcgggact gctcaggttg tatcgaacga taagcgcaac cggcacgacc ttgcctcgct
     1741 gagtcctgac gcgccactcg gccttattac cgaggctcga aaaattagat ccgacgactg
     1801 tccaaaggtc cagcgaatgt ttttggccgg ccggcgtaat gacttgaatg ttttggcgca
     1861 ggtcaccctc ttcaacctgc aacttgtaac cgctaacgcc gccgcaaatg cccacgtacg
     1921 agccgacatt ggaagagtca gctttgatcg tccggcagct tttctctccg aggttcgtat
     1981 agacgcttcg attggattgt gctgaggcgg agaccgcgca gcctaaaatg caaaaaacaa
     2041 ctagtcccag attcataatt ttcatgtttg ttccctactg gcttgttctc atcgattaaa
     2101 tgattttcga acctggtgtt gccttgcggt tggcgaatgc ggcggcgaca agcaaaatga
     2161 gtgtcacagc aaagacaatg tcctcaatga agtaaaccac tgaatagaag aagcgtgatg
     2221 ctgaaggcga catccgcatc ggctcaacga ggctcggcag ccaatacagg agcaaggtgt
     2281 aaaccaccat gtccaccaga tagataccca gcgcgacgac agtcattaac gatgctcgcg
     2341 gatgtaattt ccaccgcatg aaggcgaaga caattccccc gatcgccaac agaagcatcg
     2401 gaagtctgcg cacaaccctc gtgagaaagt acgagaagat attatcgcct gccggtaaga
     2461 ccatgtaggc gacgagaata actgcgccaa taaacagcaa aacgacgatt gtgataagca
     2521 ggggaacgag gctgcggtta gctgtgcctg gctctacgac cggcgaggaa atttcgggtt
     2581 caggagaggc aatgaccggg gttgaggcct cgatcgtttc gggcacattg tcttcggatc
     2641 cagacatgac ggcagtcggt ggcgtctcgg agtctgtcgt cgtcgagacg agttccgttc
     2701 cgtcgtcgag gcaaaacttc agcccgacgt cagagtagac tcgactgcat gcggggcatt
     2761 ggttcacttc ggtatggctc gtttcgttgt cggtacgcac gcctctggcg tgccagcagg
     2821 ccagaggcct gcgtacctca gaatcacaaa ttagtttcgg cgacaggttc cgacctgcgg
     2881 cgcatgaaaa tagcggccag caacccacca aacgcaatgg cggcagcgcc attcgaaatc
     2941 aggccaagaa tcaaatagac gcgatctata actgtgcgaa agtcttcgta gcttcccgag
     3001 gagcgaataa cccagcgggg gaccacgttg tacacaatcg tgaagacaat catgtgaaat
     3061 aataagaacc ccagcgcaat gaccacgacc atcgcgactc tcgggtggtg tttccagcgc
     3121 gtcatcgcga agacgatacc cgcgatcaac gccagaaagg acggcagttg ctcgaggtaa
     3181 gattggaaaa tgttgaagag ttgactgctt tccatgctag ttcttaaagg ccttgaccgc
     3241 ctcgcgaaat gctttgtcct tcatcatctc tttgaatgcc ggatcccggt tcaggtcggg
     3301 caatgacatt gtgtgcgacg tcgtccccgg aaagcttgtt ttctcaaaaa tctctttttt
     3361 ctttttcatc aattgaaaag tcgtttttaa agtcgcgagc gtcttagcca tgtcccccat
     3421 cgaggcgtag gtgcgggcta attgcatctg gaatgtctcg ttcgttgggt cacgagtgac
     3481 tccgtattcc aaaacctggg ccgcggccgg cagtcgggat gttgtgacgt atgcttcggc
     3541 ggatttcata atcagatcgc gccagtgttt cgcgttaagt tgcgcgtggt tttgctctaa
     3601 cgttatcgct gaagcgaggt agccggcggc tcgggcaaag tctttcttcg cgctaaagga
     3661 ccgcccgagc gaatagtaat caaagctggt tgccgggttt gacgtgtcaa caaacctggc
     3721 agactcgacc gcggagtaga acgctcgctc ttcttcggcg cccaaagaat cggcagtaag
     3781 cttgattcgg gcccaggttt ctccacctac taaaaacgct tcaagattgc gcgcagtgtc
     3841 tttagcgcca agagtgctta cgccgtgcgc agcatacaga cccgccgcca ggctgcccgt
     3901 tgtgtatctc gcgagtggaa ttccattatg ttccacatgc ttaatgtcgt acgcgccttt
     3961 agcgaacttc ttcagcgcga atgctctgaa ctcctgcgga ctcaaaccct gcgccgcagg
     4021 ttcgagaaca attgttagcc acgccggatt ggcagatttt tttgaaggtt tgagggtcca
     4081 caacaaagcg atctcgccat ccttcgtaaa actctcgatc ggatcgacga aggccgaagg
     4141 aattgcacca tccggccgga tgtcagaccg gggtaccgtc ggaagaacta actccaatgc
     4201 ctgattcttt tgcgctacag caaggcgata tcgaatggat gtcggcgctg gttgggcatg
     4261 cgcgttcaag acgcccagcg aaagcagcag agcgcacact agcgcgaacc gagaaaagca
     4321 cttgcgactc aatagagatt tccctcgcgt tttcgccccg tgtagtccac gtaaactact
     4381 tttagttcgg tatagaagtc cagcgctgtc gatccctgct cgcgatcgcc gatgccggtc
     4441 cccttgatgc cgccaaacgg cacgtgcgcc tcgccgccgg tggtcggcga gttaatgtgc
     4501 gtcatgccgg tttcaatctc atcaacaaaa cgaaagatgc gcgcggcatc gtttgtgaaa
     4561 atcgatgacg agagaccgaa ttcagtgtcg tttgccacct gcatggctgc ttcgaaatct
     4621 tttacgcgca gcacgctcag gacaggtccg aagatttctt cgcgcgcgat gcgcatgtca
     4681 ggcgtgacgt gatcaaaaac cgtcggctgg acgaagtaac ctttgtcgag gccgttgccg
     4741 gtcgcgggtt caccgccgca ggtcatcgtc gcgccgtctt cacgtccaat gttgatgtaa
     4801 tcgagcaccg tcttgaactg actttcgtca acactcggcc ccatctcagt ctgcgggtca
     4861 ttgccgtggc cgatgcgcat
//
LOCUS       DATDBY010000475         3106 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1111351, whole genome shotgun sequence.
ACCESSION   DATDBY010000475 DATDBY010000000
VERSION     DATDBY010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3106
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1111351"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="VIT19_08820"
     CDS             <1..541
                     /locus_tag="VIT19_08820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839124.1"
                     /translation="VANNIRVRRASRTLSHANSLNEIFLATQELLEVGDFVYATMQLG
                     RGGNTFRLEHKLAQERESLMMRGKALIMRQAEVRNGAVCWRWQRGEVDPEDIIGSVHY
                     WTLRLPLSTRTAEWGYLNVYREFGGEALHLDINYLCDLFQREMAKAVERVLQTTEEQE
                     TVPGVTQLAVGYGGGNSIA"
     gene            554..742
                     /locus_tag="VIT19_08825"
     CDS             554..742
                     /locus_tag="VIT19_08825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839125.1"
                     /translation="MIKAQRTIIQVSWALGVLSLLSGFIIKLLQLETRLTVAGRTAFI
                     LAGTFFLGALATRELRRD"
     gene            complement(763..1362)
                     /locus_tag="VIT19_08830"
     CDS             complement(763..1362)
                     /locus_tag="VIT19_08830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839126.1"
                     /translation="MRKTTIAILTLLVSSATTFAQEHKEKSAPPTRPPQTQTPPQSEA
                     QPSSLRYTSPEGRYSVLLPAQPTLSTQNVSAPDGRPMTQYMAMASGNGGMMMVAYFDY
                     AADVVFSLDKARDGMVTSIQGILLDEHSMSLGGAPGRQVKISARTEQGMEFIDRARFY
                     DVKPRVYVLQCITPKSIDSAAIAEKCEQFFDSFRVRSTP"
     gene            1493..>3106
                     /locus_tag="VIT19_08835"
     CDS             1493..>3106
                     /locus_tag="VIT19_08835"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HEY5839127.1"
                     /translation="MRRVFLLSLTTAALLWCVLAPAAKVSSQATAPATRSLQVAGLRA
                     PVTVRRDERGIPYIEAANDEDLYFAQGYVTASDRLWQMDLQRRTARGELSEIFGQATF
                     AQDKLHRTFGFGRIIDQAAANLDPNFNIAVTSYAKGVNAFIESLTEQTTPPEFRVLQY
                     KPRPWTPADSLAVGALMAEYLSTTWQLDVMRASLSSLPKEKREALLPETSPLDVLVVG
                     SDRRQAHGSRRTSVPAAVAGGSGRRVSKPTVQDGVTPAILSELNKLNEAQQRSFELLG
                     LTPPAWETIHASNNWVVSGKRSATGKPLLANDPHIPASAPGVWYQTQLIAPGVHVAGV
                     TFPGLPGIVAGHNERIAWGVTNLGPDVQDLYVEKFDKTNPTKYQTPTGLRDAEVRQEQ
                     IKVRQSFSSTATDTQTVDVTVTRHGPIILEKDGMRYALRWSLLDPATLQTGGIFNVNR
                     ARNWKEFTAALSSYRGPTQNFVYADIDGHIGYYGAGRIPIRKSGDGSVPYDGATDDGE
                     WTGFIPFEKLPHLYDPPSGMIVTANQRVVG"
BASE COUNT          666 a          909 c          879 g          652 t
ORIGIN      
        1 ggtcgccaac aacattcgtg tgcggcgcgc gtcccgcacg ctttcgcacg ctaacagcct
       61 gaacgaaata tttttggcca cccaggaact tcttgaggtt ggtgacttcg tttacgcaac
      121 gatgcaactc ggccgcggcg gcaacacatt tcgtctcgag cacaagcttg cacaggagcg
      181 cgagtcgcta atgatgcgcg gcaaagccct catcatgcga caggccgaag ttcgcaatgg
      241 cgccgtctgt tggcgctggc agcgaggcga agttgatccc gaagatatta tcggctcagt
      301 ccattactgg acactacggc tgccgttatc gaccaggacc gcggaatggg gttacctgaa
      361 tgtttaccgg gagttcggcg gcgaagcgct gcaccttgat atcaactatc tgtgcgactt
      421 gtttcagcgc gagatggcaa aagcggtcga acgcgtgctg caaacgactg aggagcagga
      481 aactgttccg ggcgtgactc aattagcggt gggttatggc gggggtaact cgatcgccta
      541 aacaaccaag cacatgatca aagcacaacg aacaatcatt caggtttcgt gggcactggg
      601 agtcctgagt ctcttgagcg gctttatcat taagctgctg caactcgaaa cacgcctaac
      661 cgtggcgggc cgcactgcgt ttatcctggc cggcactttc tttcttggtg cgctggctac
      721 gcgcgagttg cggcgcgact gacttcaaac ccgtcccggg gctcatggcg tagaacgtac
      781 tcggaacgag tcgaagaact gttcgcattt ctcagcgatt gctgcactgt cgatggactt
      841 cggagtgatg cattgcagca cataaaccct cggcttcacg tcataaaagc gcgctcggtc
      901 gataaactcc attccctgct cagtccgcgc gctgatcttg acttgccggc ctggcgcgcc
      961 acccaaactc attgaatgct cgtccagtag aatgccctgg atgctggtaa ccatcccgtc
     1021 ccgcgcctta tcaagcgaga acacaacgtc agccgcataa tcgaagtaag cgaccatcat
     1081 cattccccca ttgcctgaag ccatcgccat atattgagtc atcggcctcc catcgggcgc
     1141 actcacgttc tgcgtcgaga gtgtcggctg ggcgggaagc aaaacgctgt agcgaccctc
     1201 cggcgatgtg tatctaagcg aggacggttg cgcctcggac tgcggtggtg tttgtgtttg
     1261 cggcggccgc gttggtggcg cagatttctc tttgtgttcc tgcgcgaatg tcgttgccga
     1321 agaaaccagc agagtaagaa ttgcaatagt cgtttttctc atggcggatc cgatcgtaat
     1381 tttaatctga cgggcgaatc ataacagaga ccgcatcgtc ccggacagag taattcaagt
     1441 tcagcctatg ttagtatccc ggctcatcaa attccgctcg agggttcaat taatgagacg
     1501 agtattcctt ctgtctttga cgaccgcggc gctgctgtgg tgtgttctcg cgcccgccgc
     1561 aaaagtttcg tcccaggcca cggccccggc aactcggtcg ctgcaagtgg ccggcttgcg
     1621 cgcgccggtt accgtgcgtc gtgacgaacg cggcattccg tatatcgaag cggcaaacga
     1681 cgaagatttg tactttgcgc aaggctacgt caccgcgagc gatcgtctct ggcagatgga
     1741 tttgcagcgt cgcacggcgc gcggcgagct ttctgaaatc tttgggcaag cgacatttgc
     1801 gcaggacaag ctacatcgca cgttcggttt cggccgcatt atcgatcagg ccgccgcgaa
     1861 tcttgacccc aacttcaata tcgccgtcac gtcctatgca aaaggggtga acgccttcat
     1921 cgaatccctg actgagcaaa caacgccgcc tgaatttcgc gttcttcaat acaagccgcg
     1981 cccgtggact cccgcggatt ccctcgcggt cggcgcgtta atggctgagt acctgtctac
     2041 gacgtggcag ttggacgtga tgcgcgcgtc actgtcttcc cttcccaaag aaaaacgcga
     2101 agcgctgctg cctgagacat ctcccctgga tgttttggtc gtaggttcgg atcggcggca
     2161 agcgcacggc agtcgccgaa cgtcagtacc agctgcggta gcgggtgggt cggggcgccg
     2221 cgtcagtaaa ccgaccgtac aggacggcgt tacaccagcg atcctctccg aactcaacaa
     2281 actcaacgag gcgcagcaac gttcgtttga gctgctcggt ctcactccgc cggcatggga
     2341 aacgattcac gccagcaaca attgggtcgt gtccgggaaa cgcagcgcca ccggtaaacc
     2401 gcttttggcg aacgatccgc acattcccgc atcagctcca ggcgtctggt accaaactca
     2461 actgatcgcg ccgggagtgc atgtcgccgg cgtgacattc cctggcctgc cgggaattgt
     2521 cgccggccac aacgaacgca tcgcctgggg cgtgacgaat ctcgggccag acgtgcagga
     2581 cctttacgtc gagaaattcg acaagacgaa tccgacgaaa taccaaacgc ccacaggctt
     2641 acgtgacgct gaagtgcgac aggagcagat caaagttcgc cagagcttca gcagtaccgc
     2701 gaccgatacg cagactgtcg acgtcaccgt cacgcgccac ggtccaatca ttcttgagaa
     2761 ggacggcatg cggtacgcgc tgcgatggag cttgctcgat ccggcgacat tacaaaccgg
     2821 cggcatcttt aacgtgaatc gcgcgcggaa ttggaaagag ttcacggccg cgctcagcag
     2881 ctatcgtggg ccaacacaga atttcgtcta cgcagatatt gacggccaca tcggttatta
     2941 cggcgcgggt cggattccga ttcgcaaatc cggcgacggc agcgtgccct atgacggcgc
     3001 gaccgatgac ggcgagtgga ccggtttcat ccccttcgaa aagctgccgc atctttacga
     3061 cccgccgtcg ggcatgatcg tcaccgcgaa tcaacgcgtc gtggga
//
LOCUS       DATDBY010000476         2700 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2266628, whole genome shotgun sequence.
ACCESSION   DATDBY010000476 DATDBY010000000
VERSION     DATDBY010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2266628"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..286
                     /locus_tag="VIT19_08840"
     CDS             <1..286
                     /locus_tag="VIT19_08840"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY5839128.1"
                     /translation="TRSLALEVATNGITVNAICPGYVETDMTTRGIQNIVAKTGKSAD
                     SALAALKKMSPQNRLVTPEEVAAVALLLASEEGRGINGQAINVDGGTVLF"
     gene            411..2258
                     /gene="aspS"
                     /locus_tag="VIT19_08845"
     CDS             411..2258
                     /gene="aspS"
                     /locus_tag="VIT19_08845"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF001750.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEY5839129.1"
                     /translation="MIENLGDLQRTHSCGALRKDNVGESVTLMGWCARRRDFGPLTFI
                     DLRDRDGITQIVVNQENAPDAHAKAKDVRGEYVLAVIGEVVLRDETARNPKLATGEVE
                     VQATEVRILNDARTLPFQLDPDAHKPDLRENVRELRSGLAAEDLRLKYRYLDLRRPQL
                     QSNLRLRHRMILEINRYMDEQGFTQIETPNLIKSTPEGARDYIVPSRVQPGKFFALPQ
                     SPQILKQICMIAGLDKYYQIARCFRDEDLRADRQPEFSQLDVEMSFATPDQVYALVEG
                     LFERIFKLIDVELPTPFPRLTYAEVMRRFGSDKPDLRIQGMELQDLSPALAETAFAPY
                     ATVLSAGGQIKGIVVSGGASLSRKALDEFQEFAKRYGASALAWIKLGDELSSSLLKAL
                     GNDKIVELAGVAGAQKGDAVLIVAGKSDVVSASLGALRNEIAKRENLIPEGVYAPLWV
                     IEFPMFEYHEDDDRYYAMHHPFTSPLDEDVPTLERAVNGTKELFGKLRAKAYDAVING
                     VEVAGGSIRIHRRDVQSLVFKALGMTEEQTRARFGFFLDALAYGTPPHGGIASGIERT
                     LMVLVPTDNIRDVMAFPKTASAQDLMIDAPGEVDPKQLEELHLKIVDED"
     gene            2346..>2700
                     /locus_tag="VIT19_08850"
     CDS             2346..>2700
                     /locus_tag="VIT19_08850"
                     /inference="COORDINATES: protein motif:HMM:NF025819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M67 family metallopeptidase"
                     /protein_id="HEY5839130.1"
                     /translation="MSSIIALLPERFRFQEGEFYKHFAPDGAKTVDGSLVVNIQLTPG
                     QLETIIAHAREASPHECCGLIGGLIEGQAQTIYRSRNVASDPLTSYEAAPEDLFAAQR
                     AMRERGEQLLAIYHSH"
BASE COUNT          607 a          748 c          779 g          566 t
ORIGIN      
        1 gacgcgatcc ctggcattag aagtcgcgac aaacggaatc acggtgaatg cgatctgtcc
       61 gggctacgtt gaaacagaca tgacgacgcg cggcatccag aacatcgtgg caaagaccgg
      121 taagtccgcc gacagcgcgc tcgccgcgct aaaaaagatg agcccgcaga accgtttggt
      181 gacgccggaa gaagtcgctg ccgtagcgct tctgctcgct tctgaagaag gccgcggcat
      241 taacgggcag gcgataaatg ttgacggcgg gaccgtcctc ttctaattgg ttggagtccg
      301 tttttgtgct ttgatctttg tgctttgtac tttgtttgct tgggaaagta acctgcctca
      361 gagccaggcg aactaagtcc aaagtacaaa gaccaaagca cgtttttctt atgattgaaa
      421 acctcggaga tctgcaacgc acgcattcct gcggcgccct gcgtaaagac aacgtcggcg
      481 aaagcgtgac attgatgggc tggtgcgcgc ggcggcgtga tttcggtccg ctgacgttca
      541 tcgatttgcg tgaccgcgac ggcatcaccc aaatcgtcgt caatcaggaa aatgcgccgg
      601 atgcgcacgc gaaggctaag gacgtgcgcg gcgaatatgt gctggcggtg atcggtgaag
      661 tagttctgcg cgacgaaacc gcacgcaatc caaaactcgc caccggcgaa gtcgaagttc
      721 aagccactga agtccgcata ctcaacgatg cgcgcacgct cccctttcaa ttagatcccg
      781 acgcacacaa acctgactta cgtgaaaacg tgcgcgagct acgatccggg ttggccgccg
      841 aagatctgcg tctgaaatac cgttatctcg atctgcggcg gccgcagctt cagtcgaatc
      901 tgcgtctgcg tcatcgcatg attctcgaaa tcaatcgata catggacgaa cagggcttca
      961 cgcagatcga aacgccgaac ctgatcaaat ccacgcccga aggggcgcgc gactacatcg
     1021 tgccgtcgcg ggtgcagccc gggaagttct tcgctttgcc gcaatcaccg cagattctga
     1081 aacagatttg catgatcgcg ggactggata agtactatca gatcgcgcgc tgtttccgcg
     1141 atgaagacct gcgcgccgac cggcaaccgg aattttcgca gctcgacgtt gagatgagct
     1201 ttgcgacgcc ggaccaggtg tacgcactgg tcgaaggtct gttcgaacgc atctttaagc
     1261 tgattgacgt cgagttgccg acgccatttc cacgactgac gtatgcggaa gtcatgcgcc
     1321 gcttcggctc agacaagccg gacctgcgca ttcaagggat ggagttgcag gacctttcgc
     1381 ccgcgcttgc cgaaacggct ttcgcgccct atgcaaccgt tttgtcggcc ggtggacaaa
     1441 tcaaaggaat cgtcgtcagc ggcggtgcat cgctgtcgcg caaggccctc gatgaatttc
     1501 aggagttcgc gaaaaggtat ggcgcgagcg ctctcgcctg gatcaaactt ggcgatgaat
     1561 tgtcgtcgtc gcttttgaag gcgctcggca atgacaagat tgtcgaactc gctggtgtcg
     1621 caggcgctca gaagggtgat gccgtgctga tcgtcgccgg aaaatccgat gtcgtatcgg
     1681 cgagtctcgg cgctctgcgc aatgaaatcg cgaaacgtga gaacctgatc cccgaaggcg
     1741 tatacgcacc gctctgggtc attgagttcc cgatgttcga gtatcacgaa gacgatgacc
     1801 gctactacgc gatgcatcat ccgttcactt caccactgga tgaagacgtg ccgacgttgg
     1861 agcgcgcggt gaacggaacg aaggaactgt tcggaaaact tcgcgcgaag gcttacgacg
     1921 cagtcatcaa cggagttgag gtggctggcg gctcgattag aattcatcga cgcgacgtgc
     1981 agtcgctcgt gttcaaagcc ttagggatga ctgaagaaca gacgcgcgcc cgtttcgggt
     2041 tctttctcga cgcgcttgct tacggcacac cgccccacgg cggtatcgcg tcgggaattg
     2101 agcggacgct gatggtgctg gtgcccaccg acaacattcg cgacgtgatg gcctttccca
     2161 agactgcttc cgcccaggac ctgatgatcg atgcgccggg cgaagtcgat ccaaagcagt
     2221 tggaagagct gcacctgaag attgttgacg aggactaggt cgagagtgcc tttcgtcccg
     2281 tagggacgag atgtttatag ccatcaagac cgaaaagatt ctgttagctc cggtaggagc
     2341 gtgaattgtc ctcaattatc gcgctcctac cggagcgctt tcgatttcag gagggcgagt
     2401 tctataaaca tttcgctcct gacggagcga aaaccgtgga cggctcgctt gttgtgaata
     2461 ttcaattaac cccaggacag ctcgaaacga tcatcgcgca cgcacgcgaa gcctctcctc
     2521 acgaatgttg cggcctgatt ggcggcctaa ttgaaggcca agcccaaacc atttaccggt
     2581 cgcgtaacgt cgccagcgat ccgctgacct cgtacgaagc tgctcccgaa gatctattcg
     2641 cggcgcagcg cgccatgcgc gaacgtggcg agcaactgct ggcgatttat cactcgcatc
//
LOCUS       DATDBY010000477         3691 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_444133, whole genome shotgun sequence.
ACCESSION   DATDBY010000477 DATDBY010000000
VERSION     DATDBY010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3691
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444133"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..263
                     /locus_tag="VIT19_08855"
     CDS             <1..263
                     /locus_tag="VIT19_08855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839131.1"
                     /translation="SVVHHGAQFSLQRWTSMEKLRVQIQSNFQYNRYCLSRGQSIAYL
                     LATCFVTFIQKTWYKLRGRPAEATQIIWELNRAELKRTLTGN"
     gene            343..1374
                     /gene="gmd"
                     /locus_tag="VIT19_08860"
     CDS             343..1374
                     /gene="gmd"
                     /locus_tag="VIT19_08860"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017944086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008446 - GDP-mannose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEY5839132.1"
                     /translation="MKKALITGITGQDGSYLAELLLDKGYEVHGTIRRASSFNTARID
                     HLYTDPHINGVRLFLHYGDIADSTNLIKLLYRIQPDEIYHLAAQSHVRVSFDIPEYTG
                     DVTGLGTIRILEAIRETGLKSKFYQASSSEMFGKVRETPQTELTPFYPRSPYGAAKVY
                     AYWATVNYREAYGMFAANGILFNHESPRRGETFVTRKITRAVARIKANLQDKLYLGNL
                     DAKRDWGYAKEYVEAMWLMLQQDKPDDYVIATGETHSVSEFLEEAFSYADLDWRDYVE
                     MDSKYLRPSEVELLVGDASKARNVLGWEPKVAFKDLVRLMVDADMSLVTVAEPREVFG
                     DVQKIGTGA"
     gene            1410..2366
                     /locus_tag="VIT19_08865"
     CDS             1410..2366
                     /locus_tag="VIT19_08865"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HEY5839133.1"
                     /translation="MTFPYRRVVVTGGAGFLGRVIVSRLRDYADVEVTVPRSSEYNLI
                     EAADVTRLLSQTQPDLVIHLAAVVGGIGANQKNPGKFFYENLMMGTQLIEQSRLHGVK
                     KFVALGTVCAYPKFTPTPFREDDLWNGYPEETNAPYGLAKKMMLVQGQSYRQQYGFNT
                     IFLLPANLYGPGDNFDLENSHVIPALIRKCIEARDQGLPFIEAWGTGNASREFLYVDD
                     CARGILLAAANYNEGEPVNIGTGNEIKISELVETIARLSRFEGEIRWQHDKPDGQPRR
                     RLDVSRAFEKFGFQAITSLEEGLQQTIDWYEKNALASAAAEG"
     gene            2391..3263
                     /locus_tag="VIT19_08870"
     CDS             2391..3263
                     /locus_tag="VIT19_08870"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY5839134.1"
                     /translation="MPPKLSIITPSFNQAQYIEQTILSVLDQNYEPLEYIIIDGGSTD
                     GSVDIIKKYEDRLAFWVSEPDRGQAHAINKGFQRATGDIVAFLNSDDLYLPGAFAAVE
                     RYFSEHPGVEWICGDTLMFGDGKKDEVITAQVPKTAADCLCWAYLAPQPGMFWKRELL
                     RDGFAERWRYCFDHELYVRLLIEGRRCEHLDFTLAAYRLHAASKTVAEAALFDREFDE
                     IVDIYEKQLRNPGRRWCAATRHMRGSFAASNSGNRGAALGSLLRAALIHPEGLLHRPF
                     WGCLHRIISPHSPR"
     gene            3427..>3691
                     /locus_tag="VIT19_08875"
     CDS             3427..>3691
                     /locus_tag="VIT19_08875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839135.1"
                     /translation="MRSGLVLRSAGVCALAVITLGSASVESRETAKANSTEPVVAISR
                     ESLASPTTVPKVKADTQLEPPAPVESETEATDAGVALFTIRPTG"
BASE COUNT          894 a          965 c         1020 g          812 t
ORIGIN      
        1 cctcggtcgt gcatcacggg gcccagtttt cgttacagcg ctggaccagc atggagaaac
       61 tgcgagtgca aattcaatcg aactttcaat ataatcgtta ctgcctatcg cgcggacaaa
      121 gcattgctta cctgctggcc acctgtttcg tcacatttat ccaaaagacc tggtacaaac
      181 ttcggggccg cccggctgag gcgacgcaaa ttatttggga gctgaatcgg gccgaattaa
      241 agcggactct taccggcaat taagcgccgt cagtccaatt tattaatcag gtatgcgtat
      301 aatggcggat gattttgaaa gcttgcccgg ttcgatgatg agatgaaaaa agcactgatt
      361 acaggaataa cgggccagga cggttcttac ctggcagagt tactgctcga taaaggttac
      421 gaggtgcacg gcacaattcg gcgtgcttca agtttcaaca cggcacgcat cgatcacctt
      481 tacacggatc cacacattaa tggcgtgcgt ttgtttctcc actacggcga cattgcagac
      541 tctaccaatc ttattaagct gctctaccgt atccagcccg acgagatcta tcatctggcc
      601 gcgcaatcgc acgtgcgagt cagtttcgat atcccggaat acaccggtga cgtaaccggg
      661 ttgggcacaa ttcggatcct cgaagcgatt cgcgagactg gtttgaagtc aaagttttac
      721 caggccagta gctcagagat gtttggcaag gtgcgcgaga cgccgcagac cgagctgacg
      781 ccgttctatc cccggtcacc gtatggcgcg gccaaggtgt atgcctactg ggccacggtc
      841 aactaccgcg aagcctatgg catgtttgcc gccaacggga ttctcttcaa tcacgagtcg
      901 ccacgccgag gcgagacctt cgttaccaga aagatcactc gtgccgtagc acgcatcaaa
      961 gcgaatctcc aggacaaact gtatcttggc aacctcgacg ccaaacgcga ctggggctac
     1021 gcgaaggaat atgtagaggc aatgtggctt atgcttcaac aagataagcc ggacgattac
     1081 gtgattgcga cgggagagac gcattcggtg agcgagtttt tagaggaagc cttctcatac
     1141 gcggacctgg attggcgtga ttacgtggag atggattcga agtacctacg cccatccgaa
     1201 gtcgagttgc tggttggtga cgcgagcaaa gcaaggaacg tgcttgggtg ggaacccaag
     1261 gtcgctttca aagatctagt gcgtcttatg gttgacgctg atatgtccct ggtgacagtt
     1321 gccgaaccgc gcgaagtttt cggggacgtg cagaaaatcg ggaccggcgc ttagagaaat
     1381 cgaagagtaa agattaggga cagaaggacg tgacgtttcc ttatcgaagg gtggtggtga
     1441 cgggcggggc aggttttctc ggccgcgtca tcgttagccg gctgcgagac tacgctgacg
     1501 tagaggtcac cgttccgcgc agcagtgaat acaatctgat cgaggcggcc gacgtcacgc
     1561 ggttgctttc gcaaacgcaa cccgacctgg taatccacct ggccgctgta gtgggcggaa
     1621 tcggcgccaa ccagaaaaat ccgggaaagt tcttttacga gaacttgatg atgggaaccc
     1681 aactcatcga acagtcgcgt ctgcacggcg tgaagaagtt cgtggcactg ggcaccgttt
     1741 gcgcttatcc aaaattcaca cctacgcctt tccgtgaaga cgatctgtgg aatggctacc
     1801 ccgaagagac caacgctcct tacgggttag ccaaaaaaat gatgctcgtg caaggacaaa
     1861 gttatcgtca acagtacggc ttcaacacga tcttcctttt gccggcaaac ctctacggcc
     1921 ccggcgataa cttcgacctt gaaaactccc acgtgattcc agcactgatc cgcaagtgca
     1981 ttgaggcccg cgatcagggc ctgcctttca tcgaagcgtg gggtaccgga aatgcctcgc
     2041 gcgagtttct ctacgtcgat gattgcgctc ggggaattct gctggctgcg gcaaactaca
     2101 atgaaggcga accggtaaat atcggaacgg gaaacgagat caaaatctct gaactggtag
     2161 aaacgatcgc ccgcctcagt cgctttgaag gcgaaatccg ttggcaacat gataaacctg
     2221 atggtcagcc tcgccgtcgc cttgacgtct ctcgcgcatt tgaaaagttc ggattccagg
     2281 cgattacgtc cctggaagaa ggcctgcaac agacaatcga ttggtacgaa aagaacgcgt
     2341 tggcctcggc ggcagccgaa ggatagagat agaagttttt gaaagatcgt atgccgccaa
     2401 aactcagcat tatcacgccc tcattcaacc aggctcaata tatcgaacaa acgattcttt
     2461 ctgtcctcga tcaaaactac gaaccactcg agtacatcat catcgatggc ggaagcaccg
     2521 atgggagtgt ggacatcatt aagaagtacg aggatcgttt ggctttttgg gtgagcgaac
     2581 cggatcgggg acaagcgcat gcgatcaaca aggggttcca acgagcgacc ggcgacatcg
     2641 tcgcctttct aaattccgac gacttgtatt tgcccggcgc gtttgccgcc gtcgagcgtt
     2701 actttagcga acatccggga gtcgaatgga tctgtggcga cacgttgatg tttggtgacg
     2761 gaaagaaaga cgaggttatt accgcccagg tgccaaaaac ggcggctgac tgtttatgtt
     2821 gggcctatct cgcaccgcag ccgggcatgt tctggaaacg cgagcttttg cgggatggtt
     2881 tcgcggaacg ttggcgttat tgtttcgacc acgagttgta tgtgcgcttg ctgatagaag
     2941 ggcggcgctg cgagcatctg gacttcacgc ttgcggctta ccgcctgcac gctgcgagta
     3001 aaaccgtggc cgaagccgcg ctgtttgatc gcgagtttga tgaaatcgtg gacatctacg
     3061 agaagcaact ccgcaatcca ggacggcgtt ggtgcgcggc gaccagacat atgcggggct
     3121 cgtttgcggc cagcaactca ggaaatcgtg gcgctgcgct tggcagttta ttgcgcgcag
     3181 cacttatcca tcctgagggc cttctccatc gaccgttctg gggctgcctg caccgaatca
     3241 tctcgccgca ttccccgaga taaggcactc gcgcagcagt aactcagaaa gcagacaacc
     3301 gagttcgcca accctgcatc agagccattc tttcagagtt accagttccg gtgagttagc
     3361 tttacggcct ctcacgaaaa ccaatacaac tgatttgaag cagtagctgg aggacgtttt
     3421 atgttcatga gaagtggttt agttctcaga agcgcaggtg tgtgcgcact cgcagtcatc
     3481 acgctcggtt cggcgtctgt cgaatcgaga gaaacagcta aggcgaactc cacagaaccc
     3541 gttgtcgcaa tctcgcggga atctttagcg tcacccacaa ccgtccccaa ggtaaaagcg
     3601 gacacacagc tcgagccgcc tgctccagtt gaaagcgaaa ccgaagcgac ggatgcgggc
     3661 gtagcgctgt ttacgattcg ccccactggc t
//
LOCUS       DATDBY010000478         3751 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1323574, whole genome shotgun sequence.
ACCESSION   DATDBY010000478 DATDBY010000000
VERSION     DATDBY010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3751
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1323574"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..896
                     /gene="hemB"
                     /locus_tag="VIT19_08880"
     CDS             <1..896
                     /gene="hemB"
                     /locus_tag="VIT19_08880"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF006762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEY5839136.1"
                     /translation="TNFNRAQLIQPFFVVEGLKADEPIAGLRGNVRLSVPSALRQIES
                     DLKDGVTHFLLFPVPGNKREKDFDHQFERDVISQIRQQFGSNLCLWVDTCLCAYTTHG
                     HCAVLNDTGIDHPTTLDELANSALAFAEAGADGISPSDMMDGRVGRIRAQLDENGFDL
                     VPVMSYSTKFASNFYGPFRAAADSAPQFGDRKGYQLDVRNRTDALASSRRCADEGADL
                     LMVKPGMTSLDLIVPINEETGLQVGAYQVSGEYAGMSLLADNGLIDFERGLVETWHVF
                     KRAGAQFIITYGARYAKTLGI"
     gene            1091..2428
                     /locus_tag="VIT19_08885"
     CDS             1091..2428
                     /locus_tag="VIT19_08885"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: protein motif:HMM:NF000818.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEY5839137.1"
                     /translation="MSTAKSKQAFEERSSADLFTRSVRISPGGVHSPVRAFKSVGGTP
                     IFFRSAQGAILTSVEGDDYIDFCQSFGPLMLGHRDPEVAEVVKEAIDTAWSFGACEPY
                     SLELAEWITSRVPWAEMLRFVSSGTEAVMSALRVARAATGRSRILKFEGCYHGHADSL
                     LVKAGSGLAGVAASSSAGVSESVASETLVASLDDEDSVRAVFDRHGSEIAAVILEPLP
                     ANYGLLIQRREFIEETVKLARRHGALVIFDEVISGFRVATGGMAEVLGMRPDLVTYGK
                     VIGGGFPVGAYGGRRDLMEMVAPSGPVYQAGTLSANPVGMRAGLATLQKIERASAFET
                     LEKRTAQFCDRLNATFDKRGLPLQITRTASLFWLHAKTDKVIRRLEDIPAHHAENFAP
                     IFHGALSRGVYFAPSGYEVSFMSLAHTEELLENASSAILDAVMEAFPSPKAKH"
     gene            2816..3733
                     /locus_tag="VIT19_08890"
     CDS             2816..3733
                     /locus_tag="VIT19_08890"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEY5839138.1"
                     /translation="MKPGRDRIKILLVALWVTFTVTLAVWWMIFGLRQLNLLDQFHVE
                     QADQLQSHYRMLLWEGGILIASLIGGGLALYYYARREQKRHEQVEEFFAAFTHDAKTA
                     LASLRLQAESLKEDFGANPNPLLDRLLQDTLRLQLQLENSLFLVSLPTGRLLNEPVRI
                     GQIVEALRYHWPNLSIVQKGDGVVRGDSRALTSVLTNLIHNAVKHGEASEIRLTAEPS
                     GNGRLTLRVADNGSGFQGDFGELGKLFVRHARGSGSGVGLYISGQLAKRMNATLSFAP
                     GREGGFIAELSLPSEAQPVLAEQQRHKLA"
BASE COUNT          779 a         1022 c         1137 g          813 t
ORIGIN      
        1 aaacgaattt caatcgcgcg caattgattc agccgttttt cgtcgttgaa ggcctgaaag
       61 ccgatgaacc aatcgccggt ctgcgcggca atgttcgcct cagcgtcccg tccgcgttga
      121 gacagattga aagcgatttg aaagatggcg tgactcattt cctgctcttc cccgttcccg
      181 gtaacaaacg tgaaaaagat tttgaccatc agttcgagcg cgatgttatt tcccagatcc
      241 gacaacagtt cggctcgaat ctttgtctgt gggttgatac ctgcttgtgc gcgtacacga
      301 cgcacggcca ctgcgcggtg ctgaacgaca ccggtatcga tcatccgacg acacttgatg
      361 agctggcgaa ttcggcgctg gcgttcgccg aagctggtgc agacggcatc agccccagcg
      421 atatgatgga tggccgggtg ggccgcattc gcgcgcaact ggacgagaat ggattcgatc
      481 tggtgccggt gatgagttac agcacaaagt tcgccagcaa tttctacggc ccttttcggg
      541 cggcggcgga ttcggcgccg cagttcggcg accgtaaggg ttatcagctt gacgtgcgca
      601 atcgcactga cgcactcgcg tcgagtcgtc gctgtgctga tgaaggcgct gacctgctga
      661 tggtgaaacc gggaatgact tcgctcgatc tgatcgtgcc cattaacgaa gagactggtt
      721 tgcaggttgg cgcgtaccag gtgagcggcg agtacgccgg aatgtctctg ctggctgata
      781 atggtttgat cgatttcgag cgcggcctgg tcgagacgtg gcacgttttc aaacgcgccg
      841 gcgcgcaatt catcatcacc tatggcgcgc ggtatgcgaa aacgttagga atctgagtcc
      901 gcgctagcgg acgcttgaga atagcccagc gatttatcgc tgggaggatg aaagaattcg
      961 gatcttgttc cgcagctcag acaattcgat gaattgtctg agctgcggat agaaaacaaa
     1021 acgtctcgac gaacccagcc ataaatggct gggctacttt caaagcatcc gctacgcgga
     1081 tgcgatcacg atgtcgacag ccaaatctaa acaagctttt gaagaaaggt cctcagctga
     1141 tctcttcacc cgaagcgtcc gtatctcacc cggcggcgta cacagccccg tccgcgcctt
     1201 caaaagcgtg ggcggaacac cgatcttttt tcgcagcgcg caaggcgcga ttctgacgtc
     1261 cgttgaaggt gacgactaca ttgatttctg ccagagcttc gggccgttga tgctcggtca
     1321 tcgcgatccg gaagtcgccg aagttgtgaa agaagcaatc gacaccgcct ggagcttcgg
     1381 cgcgtgcgag ccttactcgc tggaactggc cgaatggatt acttcgcgtg tgccctgggc
     1441 cgagatgctg cgcttcgttt cttcgggcac ggaagcggtg atgagtgcgc tccgcgtggc
     1501 gcgggcggcg accgggcgct cgcgaattct gaaattcgaa ggctgctatc acggccacgc
     1561 cgattccctt ttagtgaaag ccggcagcgg attggccgga gtcgccgcca gttccagcgc
     1621 cggcgtttcc gaaagtgttg cgagcgaaac gctggttgcg tcgctggatg atgaagatag
     1681 cgtgcgcgct gtgttcgaca ggcacggatc ggaaatagcc gcggtgattc tcgaaccact
     1741 gccggcgaat tacggtctgt tgattcagcg gcgcgaattc atagaagaaa cggttaagct
     1801 cgcgcgccgg catggcgccc tcgtcatctt tgacgaagtc atatccggtt ttcgcgtagc
     1861 gacgggcggc atggcggaag ttctggggat gcgacccgat ctcgtgacgt acggcaaggt
     1921 tattggcggc ggattccccg tcggagcgta cggcggccgg cgcgatttga tggaaatggt
     1981 cgcgccttcc ggaccggttt atcaggccgg aacattgagc gcgaaccctg tcggcatgcg
     2041 cgcagggtta gcgaccctgc aaaagattga acgtgccagc gcctttgaaa cgctggagaa
     2101 gcgaactgcg caattctgcg atcgactgaa tgcgaccttc gataaacgag gactgcccct
     2161 acaaatcacg cgcacggctt ccctattctg gctgcatgcg aagactgaca aagtgattcg
     2221 tcgcctcgaa gacatcccgg cacatcacgc agaaaacttt gcgcccatct ttcacggcgc
     2281 cctaagtcgg ggagtttact tcgcgcccag cggctatgaa gtgagtttca tgtcgctggc
     2341 tcatactgag gagctgctgg agaacgcgag cagcgcgatt ttggacgcgg tgatggaagc
     2401 gtttccctct cccaaagcga agcattagga tggttttttc tccctctccc ttggggagtg
     2461 agggtaatca catacttgac tcaccagccc gcgaagcggg cgtcagcgta aagcctgggg
     2521 cgtaagcccc aggatcgagg gcgcaaatgt ttccagcccg cgaagcgggc gacagccgtt
     2581 aatgaactcg ttcgtgtatt ggaattcgta atgccgatga tgaaatgtcc gggcgaagaa
     2641 gttgttctaa gtctgtcgcc cgctccgcgg gctcggcgaa tgctcctgcc gggtccccgg
     2701 ggcttacgcc ccgggcttta tgctctcgcg cgctccgcgc gctgtctccc cactgcggcg
     2761 ctaggtgagt caagtatgga ttactctccc taagggagag ggagaaaaga cggaaatgaa
     2821 acctggtcgc gaccgtatca agattctgct ggtggctctt tgggtcacct tcaccgtcac
     2881 gctcgccgtg tggtggatga ttttcggttt gcgtcaactc aacttgctgg atcagtttca
     2941 cgttgagcag gccgatcaac tgcaaagtca ttatcggatg cttctgtggg aaggcggcat
     3001 tctgatcgcc tcactcatcg gcggcggcct ggcgctttat tactacgcgc gccgggaaca
     3061 gaaacgccac gagcaggtag aagaattctt cgccgcattc acccacgatg cgaaaacagc
     3121 gctcgccagc ctgcgcttgc aggccgagag tctgaaggaa gacttcggcg cgaacccgaa
     3181 tccattgctg gatcgtctgc tgcaagacac gctgcgttta caactacaac tcgagaattc
     3241 tctgtttctg gttagccttc ccactggcag gctcttgaac gagcccgtgc gaatcgggca
     3301 aatagtggaa gcgctccggt atcactggcc gaacttgtcg atcgttcaga aaggcgacgg
     3361 cgtagttcgc ggtgacagcc gcgcgctcac cagtgtgttg accaacctga ttcacaacgc
     3421 ggtcaagcac ggtgaagcgt cggaaatccg gttaactgcc gagccgagcg gcaatggccg
     3481 gttgacgttg cgcgtcgccg acaacggctc cggctttcag ggcgacttcg gggaattggg
     3541 gaagctgttc gtacgccacg cgcggggcag cggcagtggc gtcggccttt acatctcagg
     3601 gcaactggcg aaacgaatga acgcgacttt gagttttgcg ccgggtcgtg aaggcgggtt
     3661 tatcgcagag ttgagtttac cgagtgaggc ccaacccgtt ctggcggaac agcagagaca
     3721 caagctggca tgaagtcgat tttgctggtc g
//
LOCUS       DATDBY010000479         4155 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1917039, whole genome shotgun sequence.
ACCESSION   DATDBY010000479 DATDBY010000000
VERSION     DATDBY010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4155
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1917039"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1382)
                     /locus_tag="VIT19_08895"
     CDS             complement(<1..1382)
                     /locus_tag="VIT19_08895"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF006367.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEY5839139.1"
                     /translation="MAISIAVTKFKVQSTKYKARSTKHEVQSTKYKGLSTKLFGKILI
                     ANRGEIAVRIIRACRDLNISPVAVFSEADAAALHVRMCDEAHCIGPAPSTESYLNIPA
                     IIEAAKKSGAEAIHPGYGFLAENAEFARSVGEAGLTFIGPTPDAMEVMGSKTSARLAA
                     IKAGAPVVPGTTEALQNYEEAKQVAARFGYPVMLKAAAGGGGKGMRQVAEESELSSAL
                     EAAQSEAASAFGNSDVYLEKVVAKPRHIEIQVFADAHGNCVHLGERECSIQRRHQKVI
                     EECPSPINDPELRQRMGEAAIKIAQAVNYVGAGTVEFLFSDESSEFYFLEMNTRLQVE
                     HPVTELVTGFDLVREQINVAAGGSLTFTQADVQWHGHAIECRVYAEDTANNFFPSPGK
                     ITFLRVPAGPGIRDDSGVSEGDEVSIHYDPMISKLAAWGRTRAEAIDRMRRALDEYAV
                     GGIRTTLPFFR"
     gene            complement(1523..1810)
                     /locus_tag="VIT19_08900"
     CDS             complement(1523..1810)
                     /locus_tag="VIT19_08900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839140.1"
                     /translation="MSFLARFRRNKEDPEVVRRRILLKFGRIGEASVIEITKDDNGNT
                     MLAYSYTVGGVDYQAWQRQDDDQLRRPHDYFPDARVDLRYDPKRPVNSFVV"
     gene            complement(1814..2683)
                     /locus_tag="VIT19_08905"
     CDS             complement(1814..2683)
                     /locus_tag="VIT19_08905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839141.1"
                     /translation="MEGQLCLGCPACGARAVGPPLAKPEHQLVSFGPAALAALGGGLM
                     LVGFLASTTVVWVVSKGAALNLGTIVAAGQTAAWQLKWISVPVVIAVILSGLRSLRTI
                     RESPADFGGLRIARGGFGAAILATLMVATLIGVTVPERLRRRQWGIEAAELARGYTFH
                     RALLEYRELHGTLPPRDELARELRTLPDPDGSIAEALRNFDASGYEARSVTAAAAAAP
                     TTKPLPRGGALRTVSLNTTSDAPPVSFTNYELRLPGKDKKPNTEDDLVVRDGLILTLP
                     ELRDYRAARSSAP"
     gene            complement(2810..3529)
                     /locus_tag="VIT19_08910"
     CDS             complement(2810..3529)
                     /locus_tag="VIT19_08910"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEY5839142.1"
                     /translation="MFGASIGRAGQRIIDAMVRWLARGHISPNFLTFVGVAINVGSGL
                     LFGWGQFFWAGIILIVANLFDMLDGQVARLSGRVTRFGGFLDSSLDRLSDMVVFVGLM
                     VFYARDTEFHSTLNVFLAGAGLMGSIMVSYASARAESLIPKCDVGFLRRPERVVLFII
                     GALTTHPGSTNFFLNRMPAVLWVLAIGSYWTFAHRMYHTWIELNRTKREAAQSELTAA
                     NGAEQHPGERRPEATLAAKTG"
     gene            complement(3681..>4155)
                     /locus_tag="VIT19_08915"
     CDS             complement(3681..>4155)
                     /locus_tag="VIT19_08915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839143.1"
                     /translation="YINSIFRLHGSRTVEVMLEKVQDTLPATVTRSGGRESFVLHFRG
                     GDVQLPQDTYTLEHPALGNFKLFVVPGGADKNGAQSYVATVNRLSYASKPSAAPKAMP
                     RKAPPESTPKTDSSTPVKVTPETKTPGPAETTKPQAPVKPRRWKVDPDLYPEFDY"
BASE COUNT          932 a         1212 c         1145 g          866 t
ORIGIN      
        1 cgaaagaacg ggagcgtcgt cctgatcccg cccaccgcgt attcatccag cgcgcgccgc
       61 atgcgatcga tcgcttcagc gcgcgtgcgg ccccaggcgg cgagctttga aatcatcgga
      121 tcgtaatgaa ttgagacttc gtcgccttcg ctgacgccgc tatcgtcgcg gatgcccgga
      181 ccggcgggca cccgaagaaa agtaatcttg ccaggcgatg gaaagaaatt gttggccgtg
      241 tcttcggcgt agacgcgaca ctcgatcgca tggccgtgcc actgcacgtc tgcttgtgtg
      301 aaagttagtg atccaccggc cgcaacattg atttgttcgc gcaccagatc aaagccggta
      361 acaagttccg tgaccggatg ctcgacctgc aagcgtgtgt tcatctcgag gaagtaaaac
      421 tcactcgact cgtccgagaa gagaaattca actgtccccg cgccgacata gttgaccgcc
      481 tgcgcaattt tgatcgctgc ctcgcccatg cgctgtcgca gctcgggatc attgattggc
      541 gacggacatt cttcaatcac cttctgatgg cggcgttgga ttgaacactc gcgttcaccg
      601 agatggacgc agttgccgtg cgcgtcggcg aagacctgga tttcgatgtg gcgtggtttc
      661 gcgacaacct tttcgaggta aacgtctgaa ttgccgaacg ccgaggcggc ctctgattgc
      721 gcggcctcaa gagccgaact caattcgctc tcttcagcaa cctgccgcat gcctttgcca
      781 ccaccgcccg cagcggcttt tagcatcacc ggataaccga acctggcggc aacttgtttg
      841 gcttcttcat aattctgcaa agcctcagtc gtacccggga cgaccggcgc gcccgcttta
      901 atcgccgcca gacgcgcgct ggtcttcgag cccatcacct ccatggcgtc gggcgtcggg
      961 ccaatgaagg tcaatccggc ttcgccgacg gagcgggcaa actcggcatt ctcagccaaa
     1021 aagccgtagc cgggatgaat tgcttcagcg ccggatttct tagcggcctc aatgattgcc
     1081 ggaatgttca gataactttc ggtcgaagga gccgggccga tgcagtgcgc ttcgtcacac
     1141 atgcgcacgt gcagggcggc tgcgtcggct tcggaaaata ccgcgaccgg cgagatgttc
     1201 agatcgcggc aggcgcgaat gatgcgcacg gcgatctcac cacgattggc gattaggatt
     1261 ttcccaaaca acttcgtact tagtcctttg tacttcgtgc tttgtacttc gtgctttgta
     1321 cttcgtgctt tgtacttcgt gctttgtact ttgaactttg tcacggcgat tgagatcgcc
     1381 accaacgcct agagtactaa gtacaaagca cgaagtacaa agtactaggc actaagcact
     1441 acgcacggag aaatctcaga tttaagatct ccgatatgag atttaagatt caagatttca
     1501 aattcaagat ccaggtaggc gattaaacca cgaatgaatt gactggtcgt ttgggatcgt
     1561 agcgcaagtc aacccgcgcg tcagggaagt agtcatgtgg gcggcgcaac tgatcgtcgt
     1621 cctgacgttg ccacgcttga tagtccacgc cgccgactgt gtagctgtac gccagcatcg
     1681 tattgccgtt gtcgtctttg gttatctcga tcacgctcgc ttcgccgatg cggccgaatt
     1741 tcagaagaat tctgcggcga acaacttcgg gatcttcttt gttacgacga aagcgggcca
     1801 ggaaggacat tagctatggc gcgctggagc gcgcagctcg gtagtcgcgc agttccggca
     1861 aggtaagaat caagccgtcg cgaaccacca gatcgtcttc agtgttaggt tttttatctt
     1921 tgccgggaag gcgcaactcg taattcgtga acgagacggg tggtgcgtca gaggtagtgt
     1981 tcagcgaaac agtgcgcaac gcgccgccac gtggaagagg cttggttgtc ggcgcggcgg
     2041 cggccgcagc cgtcaccgac cgtgcttcgt agccacttgc gtcgaagtta cgcagcgctt
     2101 cagcgatcga accgtccggg tcgggcagcg ttcgaagctc gcgagcaagt tcgtcacgcg
     2161 gcggcaaagt tccgtgcagc tcgcgatact caagcaaagc gcgatgaaac gtgtagccac
     2221 gcgcgagctc ggccgcttcg attccccatt gccggcgtcg tagtctttcc ggaacagtga
     2281 caccgatcaa cgttgccacc atcagggtcg cgagaatcgc tgcaccgaat ccgccacgag
     2341 cgatgcgcaa tccgccaaag tccgcgggcg actctcgaat cgttctcagc gatcgcaagc
     2401 cgctcaaaat aacggcaatt actaccggca ccgaaatcca cttcaactgc cacgccgccg
     2461 tttggccggc tgcgacaatc gtccctaagt tgagcgccgc gcccttgctc acgacccaca
     2521 cgacggtcgt tgacgccaaa aaaccaacga gcatcaaacc gccgcccaat gcggcgagag
     2581 cggcaggacc aaaggagacg agttgatgtt caggtttggc gagcggcgga ccgacggcgc
     2641 gcgcgccaca agccggacaa ccaagacaaa gttgtccttc cacggaagat ccacatgcgg
     2701 ggcagatgat caagattgct ttacctttta gaaaattgcg cggactaaat tagaccgaga
     2761 ttgcaggttc gtcaagagtt atctcacaga aaacattcag acgctaactc taacccgttt
     2821 ttgccgccaa agtcgcctct ggacgtcgct cgcctgggtg ttgttccgcg ccattagcag
     2881 ccgtcaactc actctgcgcc gcttcacgtt tggtgcgatt cagctcaatc caggtgtgat
     2941 acatgcggtg cgcaaacgtc cagtacgagc caattgccag aacccataaa accgccggca
     3001 tccggttaag aaagaagttg gtcgagcccg ggtgcgtcgt cagcgcgccg atgatgaaca
     3061 gcaccacccg ctccggacgg cgcagaaagc caacatcgca tttcgggatc aggctttcgg
     3121 cgcgggcgct cgcgtaactc accatgatcg agcccatcaa cccggcgccc gcgagaaaca
     3181 cattcagcgt tgagtgaaac tcagtatcac gcgcgtagaa aaccatcagt ccgacaaaca
     3241 ccaccatgtc ggacaaccga tcaagcgatg aatcaaggaa cccaccaaac cgggttacgc
     3301 ggccggacaa gcgggctacc tgcccatcga gcatgtcgaa caagttcgcg acgatcagga
     3361 tgatgccggc ccagaagaac tggccccatc caaacagcaa gcccgaccca acatttatcg
     3421 ctacgccgac gaacgttaga aagttcggac taatatgccc gcgggcaagc catcgcacca
     3481 tcgcgtcgat aatgcgctga cctgcgcgcc cgatgctggc tccaaacata cttacgcttt
     3541 cttaagctgc gttactaaac ctttgagatc gatccgctgc cgaagggaac ttcaaacagg
     3601 atgatagaaa cgcactctaa gagtgtcaag aaaacgtcta gctagtcggg atcacgccag
     3661 cgggctgaaa tgtccactta ctagtaatcg aattccgggt aaaggtccgg atcaaccttc
     3721 catcttcgag gcttaaccgg tgcctgaggc ttggttgttt cggccgggcc gggagttttt
     3781 gtctcaggag taaccttcac tggcgtcgat gaatcagtct ttggcgttga ttccggaggc
     3841 gccttacgcg gcatggcctt cggtgcggcg ctgggtttgg acgcgtacga gagccgattg
     3901 accgtcgcga cataactttg cgcgccgttc ttgtcggccc cgccgggaac cacaaacaat
     3961 ttgaaatttc caagcgccgg gtgttccagg gtgtaagtgt cctggggaag ctggacatcg
     4021 ccgcctcgga agtgcagcac gaatgattcg cgtccaccgc tgcgcgtcac cgtcgcgggc
     4081 agcgtgtcct gcactttttc caacatcacc tcgacagtcc tggatccgtg cagccgaaag
     4141 atcgaattga tgtat
//
LOCUS       DATDBY010000480         2227 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2474285, whole genome shotgun sequence.
ACCESSION   DATDBY010000480 DATDBY010000000
VERSION     DATDBY010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2227
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2474285"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            127..>2227
                     /locus_tag="VIT19_08920"
     CDS             127..>2227
                     /locus_tag="VIT19_08920"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEY5839144.1"
                     /translation="MLDGATTVKVAVTKKKTRTVEAGGKKQVANVYLARLATVEFDVY
                     LTEAGQFAAWDIPSQRLQAVASGREGFLVDPTTLYPELSQPVMTTRAEKAVKIKMRDG
                     VDLVAEIVRPADDAKHPVILERTPYGRETTSQLGGEWWAKRGYVHIVSDVRGRNDSDG
                     EWKPFVHERKDGYDTIDWITKQSWSDGNVGMIGGSYVGLVQWQAAVEAHPALKCIVPQ
                     VSPPDPFFNFPIDHGVPMLFGALWWANFVKDKKVPAQPATPKDIEKLKTLPLSKVDDE
                     TFGQDIPFFNEWLEKQTPSQFAGANFMSDMDKVKIPVLHISGWWDGDGIGTKLNWARM
                     RSLGSKNQWLIYGPWTHIFNSTSRMGDVDYGPDAIIDLDSVYLRFFDTWLKKKQVAWE
                     QQPKVRVFVTGINQWRELNDWPDSRSREMTLFLSSRGPANGIASVGELVPSAPRKQSP
                     DRYTYDPAAAEIPAQMKNIKDFGDLLAAGSSVVKIDGAEKDVLIYRSAPMTEPLEIGG
                     PIELDLRFATTARDTDFFASLVDIDEKGTMRVIGIGGKIRARYLSGWEKPSLLTPGKV
                     YKATLALWDTAHQVKKGHRLAVIITSDAFPGYARNLNTGEPLINATRMVPAHQTIYHD
                     AMQPSALRFRVLMQNRELQSNHGSDPEAGAGREVLAIVTKIEPKAYTDDLGNGKVLVS
                     DIIRFAVVEPTGLKHVTV"
BASE COUNT          494 a          629 c          663 g          441 t
ORIGIN      
        1 aacagccgca ccgtcgacta caaaccggcg agcgtcctgt tcggaaacct ccacccggtc
       61 ctgactcaaa cgtgggccaa agttctcgat cccaccaagg agggcgttca gcacatcgag
      121 gtcttcgtgc tggacggcgc caccaccgtc aaagtcgcgg tcacaaaaaa gaagacgcgc
      181 accgttgaag caggtggtaa aaaacaggtc gcgaatgttt acctcgcgcg tctcgcgacg
      241 gtcgagttcg atgtgtacct caccgaagcc gggcaattcg ccgcgtggga tattccgtct
      301 caacggttgc aagccgttgc ctcaggtcgt gaaggcttcc tggttgatcc aacgacgctt
      361 tatccggaac tgagtcaacc ggtgatgacc acgcgggctg agaaggccgt caagatcaaa
      421 atgcgcgacg gcgtcgatct cgtcgccgag atcgtgcgcc ccgctgatga tgccaaacat
      481 ccggtcatcc tcgagcgcac gccatatggc cgcgaaacca cgtcgcagct gggcggcgag
      541 tggtgggcta agcgtggtta cgtgcacatc gtttctgacg tgcgcggccg caacgacagc
      601 gacggcgagt ggaagccttt tgtccacgag cgcaaagacg gttatgacac gatcgattgg
      661 attactaaac aaagctggtc tgacgggaat gtcggaatga ttggcggcag ctacgtcggt
      721 ctggtgcagt ggcaggccgc ggtcgaagcc catccggcac tgaaatgcat cgtgccgcag
      781 gtctcgcccc ccgatccttt tttcaacttc ccgatcgatc atggcgtgcc gatgctgttt
      841 ggcgcgctct ggtgggccaa cttcgtcaaa gacaagaagg tgcccgccca gccggcaacg
      901 cccaaagaca tcgagaagct aaagaccctg ccgctatcaa aagttgatga cgaaacattt
      961 gggcaggata ttcctttctt taacgagtgg ctcgagaagc aaacaccgtc tcaatttgcc
     1021 ggtgcgaact tcatgtccga catggacaag gtcaagattc ccgtgctgca catcagtggc
     1081 tggtgggacg gcgacggcat cggcacgaaa ctcaactggg cccgaatgcg ctcgctcgga
     1141 agtaagaacc agtggttgat ctatggtcca tggacgcaca tttttaacag cacttcacgc
     1201 atgggcgacg tcgattacgg acccgacgcc atcatcgatc tcgattccgt ctatttgcgc
     1261 ttcttcgaca cctggctgaa gaagaaacag gtcgcctggg agcagcagcc gaaggtgcgc
     1321 gtgttcgtca ccggcatcaa tcagtggcgt gagctgaacg attggcctga ttcacgttcg
     1381 cgcgagatga ccctctttct gagttcgcgc ggcccggcca atggaattgc gagcgtcggc
     1441 gagttggtgc cgtcggctcc ccggaagcag tcaccagatc gctacacgta tgatccagcc
     1501 gcggccgaga ttcccgcaca gatgaaaaac attaaggact tcggcgatct gctcgcggcg
     1561 ggctcaagcg tggtgaaaat cgacggagcg gaaaaagacg tgcttatcta ccggagtgcg
     1621 cccatgaccg agccgttgga gattggcggt ccgattgaac tcgatctgcg ctttgcgacg
     1681 acggcgcgcg atacggactt ctttgcttca ctggtggata ttgatgaaaa ggggacgatg
     1741 cgtgtgatag gtattggcgg aaagattcgc gcgcgttatt tgtccgggtg ggaaaagccg
     1801 tcactgctga cgccgggcaa ggtgtataag gcgaccctcg cactctggga caccgcgcat
     1861 caggtgaaga aaggacatcg cctggcggtg attatcacga gcgacgcgtt tcctggctac
     1921 gcgcgcaacc tgaacaccgg cgaaccgctt atcaatgcga cgcggatggt acctgcgcac
     1981 cagaccatct accacgatgc gatgcagccg agcgccctgc gctttcgcgt gctgatgcaa
     2041 aaccgcgagt tgcagtccaa tcacggctcc gatcctgagg caggcgcagg tcgtgaggtt
     2101 ctggcgatcg tgacgaagat cgaaccgaag gcttacaccg acgatctcgg aaacggaaag
     2161 gttttggttt ccgacatcat tcgttttgca gtggtcgagc ccaccgggct caagcacgtc
     2221 accgttg
//
LOCUS       DATDBY010000481         2864 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_853801, whole genome shotgun sequence.
ACCESSION   DATDBY010000481 DATDBY010000000
VERSION     DATDBY010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2864
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_853801"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..254
                     /locus_tag="VIT19_08925"
     CDS             <1..254
                     /locus_tag="VIT19_08925"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEY5839145.1"
                     /translation="GIGITRREQTKIFEKFYRTGDPLVHNTKGSGLGLSLVRHITNAH
                     GGSVSVESTPGKGSKFILSLPLNGRQTPDRQGERSNGIS"
     gene            264..1016
                     /locus_tag="VIT19_08930"
     CDS             264..1016
                     /locus_tag="VIT19_08930"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5839146.1"
                     /translation="MSSKVKSNGHSNGDAAVVEVLNGKKTRILIVEDEPAMVAGLRDN
                     FEYEGYEVISASDGVEGLERALAEDPDLIVLDVMMPRMSGLDVCKQLKAKKPSLPIIM
                     LTARGQEVDKVVGLELGADDYVTKPFSIRELMARVKAVLRRASPHSPEPEIYRFSDVE
                     VNVRRNEVMRNGSRVELSAKEFALLAYFVAHPAETLSRDRLLDAVWGYENYPNTRTVD
                     THIVHLRQKLEPNPEEPRFILTVHGTGYKFVG"
     gene            1216..2079
                     /locus_tag="VIT19_08935"
     CDS             1216..2079
                     /locus_tag="VIT19_08935"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HEY5839147.1"
                     /translation="MTHSLNNRSAAKPALDVRTYGPRRTISRKPGRQELESKLAELQR
                     DYAELHTSIFEAAQVHRRLCAPRLVRFGDFEIASEIFAVRQLPGDFFTVEQSANDIVM
                     ALGDVCGKGLAAGMWTPHLVGLVRAHTTPVAAPHSIVTDVNRDACRTAPLGPLASLFL
                     ARLDPLTGLLSYCSAGHPPVMLLRANGELELLTEGGLLLGVLDDAEYTCGSCVLGKGD
                     TLLIYSDGITESRNSTAEEFGNARLERHLRDSQASSADAALFSVLGAVQDFAATRSLA
                     DDVSLAIIRRN"
     gene            complement(2142..>2864)
                     /locus_tag="VIT19_08940"
     CDS             complement(2142..>2864)
                     /locus_tag="VIT19_08940"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY5839148.1"
                     /translation="WRDQIPEFAKHYRVIALDLPGHGKSDKPQFTKESVPKNQPRKPF
                     VYSMDHFARAVEAVMRDAKVSRAVLAGHSMGTPVARQFYRNYPEKTLGIIVVDGSLRP
                     FGNPAILDQLIANLRGPDYNVAIDQMFGMMFGAGLAAEAQQRIKASTANTPQYVLVSA
                     FEGMADSGIWGADKINLQVLAIMAKNPFYPPNVEESFRGIAPKMEFHLWDSVGHFLMM
                     EKPKEFNAAVIAWLDKNGLLKK"
BASE COUNT          603 a          803 c          842 g          616 t
ORIGIN      
        1 gcggcatcgg tatcacgcgc cgagagcaga caaagatttt cgaaaagttc tatcgcaccg
       61 gcgacccgct cgtgcataac acaaaaggga gcggcctcgg cctgtcgctg gttcgacaca
      121 tcaccaacgc gcacggcggc agcgtttcag tcgagagcac gccgggcaag ggaagcaagt
      181 tcattctgtc gctgccgctg aacggcaggc agacgcctga ccgtcaggga gagcgcagta
      241 acggtatttc ttgaggagcc aacatgagca gcaaagtgaa atctaacgga cactcaaatg
      301 gcgacgccgc cgtcgtcgaa gtgttgaacg gcaagaagac gcgcatttta attgtcgagg
      361 acgagccggc aatggtcgcc ggtctgcgtg acaattttga atacgaaggc tacgaggtca
      421 tcagcgcgag cgatggcgtg gaaggtcttg agcgcgcgct ggctgaggat cctgacctga
      481 ttgtgctcga cgtgatgatg ccgcgcatga gcggcctgga tgtgtgcaag caactcaagg
      541 cgaagaagcc ttcgctgccg atcatcatgc tgacggcgcg cggtcaggaa gtcgacaaag
      601 ttgttggact ggaacttggc gccgatgatt acgtgacgaa gccgttttcg attcgcgagc
      661 tgatggcgcg cgtcaaagcc gtcttgcgtc gcgcttcacc gcattcgcct gagcccgaga
      721 tatatcgatt cagtgacgtc gaagtgaatg ttcggcgcaa cgaagtgatg cgcaacggct
      781 cgcgcgtgga gctttccgcg aaagagtttg cgttgctcgc ctatttcgtc gcgcatccgg
      841 cggaaacttt gagtcgcgat cggctgttgg acgccgtttg gggttacgaa aactatccga
      901 acacgcgaac cgtggacacg cacatcgtgc acctgcggca gaagttggaa ccgaacccgg
      961 aagagccgcg tttcattctt accgtgcacg gaactggata taagttcgtc ggttaaatct
     1021 tcgctccgtt aggagcgaga tatttatagc ttagatgtaa ttcagtttgg tggtcagcgt
     1081 tcggaggagc gaacccggcc gttgtttttc agacgcaact cgaattcgct cctccgaacg
     1141 ctgagactct aattagtcag ctgtatctat aaacatttca ctcctggcgg agtgagaaca
     1201 caggcaggcg ctttcatgac gcactctctc aacaatcgct cagcagccaa acccgctctc
     1261 gatgtccgca cttacgggcc acgccgcacg atttcacgca agccgggccg tcaggaactc
     1321 gagtcgaaac tggcagagtt gcagcgagac tacgctgaac tgcacacgtc aatcttcgaa
     1381 gcggcgcagg tgcacaggcg actgtgtgcg ccgcggttgg tccgtttcgg tgacttcgaa
     1441 atcgcgagcg agattttcgc ggtgcgccaa ctgcccggtg atttcttcac cgtcgagcaa
     1501 tcagccaatg acatcgtgat ggcgttagga gacgtttgcg gtaaaggtct cgccgccggc
     1561 atgtggacgc cgcacctggt cggcctggtg cgcgcgcaca ccacgccggt cgcggcgccc
     1621 cactcgatcg ttacggatgt aaatcgcgac gcatgtcgca ccgcgccgct cggcccactg
     1681 gcgagcctgt tcctggcgcg attggatccg ctcacgggct tgctcagcta ttgcagtgcc
     1741 ggacatccgc cggtgatgct gctgcgcgcg aatggagaac tcgagttgct gacggaaggt
     1801 gggctgttgc ttggagtgct ggacgacgcg gaatatacat gcggctcgtg cgtgctcggc
     1861 aaaggcgaca cgttgctgat ttattccgac gggatcactg aatcacgtaa cagcacggcg
     1921 gaagagttcg gtaatgctcg tctggaacgg cacctgcgcg actcgcaggc aagttcggct
     1981 gacgctgctc tgttttcagt cctgggcgcc gtacaggatt tcgctgcgac gcgatcactc
     2041 gcggatgacg tgtcgctcgc gatcatccgg cggaattaat ccgcagaatt ggtacgcacg
     2101 cctcaggcgt gcagcatgcc agcggcatgc gtaccggcgg attacttctt cagcagtcca
     2161 ttcttgtcca accacgcaat aaccgcggcg ttgaactcct tcggcttttc catcatcaga
     2221 aaatgtccga cactgtccca taagtgaaac tccatcttcg gggctatgcc gcggaatgat
     2281 tcttcgacgt tcggcgggta gaacgggttc tttgccataa tcgccagcac ttgcagatta
     2341 attttgtctg ctccccaaat ccctgagtca gccatgcctt cgaacgcgct taccaaaaca
     2401 tattgcggcg tgtttgcagt tgaagctttg attcgctgct gagcttcggc cgccagccca
     2461 gcgccaaaca tcattccaaa catctgatca atagctacgt tgtagtccgg accgcgcaag
     2521 tttgcgatca actgatccag gattgccggg ttgccgaaag gcctgagcga gccgtcaacg
     2581 acgataattc cgagcgtctt ctccggatag ttgcgataga actgacgcgc gaccggcgtt
     2641 cccatgctgt ggccggcgag cacggcacgg ctcacttttg cgtcgcgcat cacggcctca
     2701 accgcgcgcg cgaaatgatc catcgaataa acaaatggct tgcgcggctg atttttcggc
     2761 acagattcct ttgtgaactg gggtttgtcg ctcttgccgt ggccgggaag gtcgagcgca
     2821 atcacgcggt agtgcttcgc gaattccgga atctgatcgc gcca
//
LOCUS       DATDBY010000482         3199 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1479485, whole genome shotgun sequence.
ACCESSION   DATDBY010000482 DATDBY010000000
VERSION     DATDBY010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3199
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1479485"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..900)
                     /locus_tag="VIT19_08945"
     CDS             complement(<1..900)
                     /locus_tag="VIT19_08945"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF020892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEY5839149.1"
                     /translation="MKTFYVTTPIYYANSLPHLGHLYTMIAADTIARSKRQQGIETFF
                     LTGTDEHGINIERAAQRNNRAPKEQADYVVSYFTKMTAAFGLDTAHGGYDIFMRTTNP
                     FHYESVSELWRRVSKAKTPKGNDALYKGHYEGWFCAPCAGYKTEDEYAPPANPGEPPT
                     CLVHETKLDRISEESYFFRLSDYDEALLNLYNSSSDFVRPEARRNEVKSFVAGGLQDL
                     SVSRLKSSVSWGVPVPDDPNHTMYVWFDALSNYITAIGFGNEQQNRAIGFEKFWPALH
                     LVGKDILRFHAVYWPAFLMAGGIP"
     gene            complement(907..1155)
                     /locus_tag="VIT19_08950"
     CDS             complement(907..1155)
                     /locus_tag="VIT19_08950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839150.1"
                     /translation="MSNKTEVPRLAVCIQTDDPDLLTPRMIYQVLQDESAAKSDCVRV
                     IDNEGQDYLYPAKYFMFVDLPSEVQRALIDAPQSHAAR"
     gene            complement(1483..2109)
                     /gene="folE"
                     /locus_tag="VIT19_08955"
     CDS             complement(1483..2109)
                     /gene="folE"
                     /locus_tag="VIT19_08955"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: protein motif:HMM:NF006826.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEY5839151.1"
                     /translation="MNAKLTALKSKRERAPKARRADLARIAEGVRLILEGIGEDPNRE
                     GLRDTPKRVAEMYEELTAGMREDPSEHIVPLSGNKHDEMVIVKDISIASLCEHHLAPF
                     VGKCHIAYIPKNGNILGVSKLARLAETFARRLQLQERLTSEIANTLYEKLGALGVMVV
                     IEAEHTCMTLRGVKKPGAQTVTSAVLGGFRKDPRTRAEAMSLIIGNRK"
     gene            complement(2112..2912)
                     /locus_tag="VIT19_08960"
     CDS             complement(2112..2912)
                     /locus_tag="VIT19_08960"
                     /EC_number="2.3.1.286"
                     /inference="COORDINATES: protein motif:HMM:NF001753.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0017136 - NAD-dependent histone
                     deacetylase activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacylase"
                     /protein_id="HEY5839152.1"
                     /translation="MIREIAGVRRALLPSDFLMQAFASAKVISDELRQRFARARNVLV
                     LTGAGVSAESGVPTFRGGGQSAVWKGMPFDVISSGAMIERDLPAVWEWFNYRRGVLRT
                     LKPNAAHETIAGWQDRFEQFTLVTQNVDGLHWLAGSRDVIELHGSVWRARCLSCHAGI
                     SLRELDHQDGVPECLECGSSMRPDVVLFGEMLPAGAFEKAARRAAACDLCFVIGTSAV
                     VYPAAAIPEIAREAGAYVVEVNPEPTPLSGICNEVLTGKAGEILPLIQ"
BASE COUNT          701 a          939 c          836 g          723 t
ORIGIN      
        1 cggaattcca ccggccatta gaaaagcggg ccaatagaca gcatgaaagc gcaaaatgtc
       61 tttaccgacc aggtgcagcg ccggccaaaa cttctcgaaa ccgatggcgc gattctgctg
      121 ttcgtttccg aatccgatcg cggtgatgta gttcgacagc gcgtcgaacc aaacgtacat
      181 cgtgtgattc ggatcgtcgg gcacgggaac gccccaactg acggatgatt tcagacggct
      241 gaccgaaaga tcctgaagac cgcccgcgac gaaacttttt acttcattcc gtcgcgcttc
      301 cggtctcacg aaatctgaac tggagttgta caggttgagc aaagcctcgt cgtaatcaga
      361 caaccggaag aaataactct cttccgaaat gcgatcgagt ttcgtttcgt gaaccaggca
      421 agtgggcggt tccccgggat tagctggtgg cgcgtattca tcctcagttt tgtaacccgc
      481 acaaggggcg cagaaccagc cttcgtagtg acctttgtac aacgcgtcgt tgcctttcgg
      541 cgtcttcgct ttcgacaccc gccgccaaag ttcgctcaca ctctcatagt gaaacggatt
      601 cgtcgtccgc atgaagatgt cgtaaccccc atgcgcggta tcgagcccga acgcggccgt
      661 cattttagtg aagtagctga cgacgtagtc ggcttgttct ttcggagcac gattgttgcg
      721 ctgggctgcg cgctcgatgt ttatgccgtg ttcgtctgtg ccggtgagga agaacgtctc
      781 aattccctgc tgccgtttcg accgcgcgat cgtgtccgcc gcgatcatcg tatagagatg
      841 accgaggtgc gggagactgt tggcgtagta gatcggggta gtgacgtaga aggttttcat
      901 cgcgcgctag cgagccgcgt gagactgagg agcgtctatc agcgcacgtt gcacctcgct
      961 cggtaaatcg acgaacatga agtactttgc tgggtaaaga taatcctgac cctcgttgtc
     1021 gatgacccgc acacagtccg actttgccgc gctctcatct tgcagaacct gataaatcat
     1081 gcgcggcgtt aacagatcgg gatcgtcagt ttgaatacac actgcgagac gcggaacttc
     1141 cgtcttgtta ctcatgtcgt ctcaatccaa gaaccgtttg attctcatct tcttcttacc
     1201 gatgccgtgc gcctcgaacc aatgaatctc ggctggacgt atcgtaccat cggacagtct
     1261 aactgtggca atacctttca attttcgcca tcgccgcccg ccgaagcgtt tccttaagag
     1321 cgacgaatgc gaacgctcgg gccggcagca ataatttcga tgtccgagat gtttccaaca
     1381 atctcgaaat acatgggagt gtcgggccgg tctaatcgtt ataggctaaa ccaacttgct
     1441 attgccgtga tccatttgcg cattaccaaa tctttatatt cactactttc tattgcctat
     1501 tatcaacgac atcgcctcgg cacgcgtgcg cgggtctttg cggaaaccgc cgagcaccgc
     1561 tgaagttacc gtctgcgcgc ccggcttctt aacgccgcgc aaagtcatgc acgtgtgttc
     1621 cgcctcgatc acaaccatca cgccaagcgc gcccagcttc tcgtaaagag tgttcgcaat
     1681 ttctgaagtc agtcgctcct gcaattgcag acgccgcgcg aaggtttcgg ccagccgcgc
     1741 cagcttcgag acgccgagaa tgtttccgtt cttgggaatg tatgcgatgt gacatttgcc
     1801 gacgaacggc gcgagatgat gttcacaaag cgaagcgatc gaaatgtcct tcacgatgac
     1861 catctcatcg tgcttattcc cggacagcgg cacgatgtgc tcgctcggat cttcccgcat
     1921 gccggcagtg agttcctcat acatttcggc aacgcgtttc ggcgtgtcgc gcaagccctc
     1981 gcgattcgga tcttcgccaa tgccttccag aatcaggcgt acgccttccg cgatgcgcgc
     2041 aagatcggcg cggcgcgctt ttggtgcgcg ctctcgcttc gatttcagag ctgtgagctt
     2101 tgcattcata actattgaat caacggaaga atctcaccgg ctttgccggt cagcacttcg
     2161 ttacagatgc ctgacagcgg cgtcggttcc ggattgactt cgacaacgta cgctcccgcc
     2221 tcgcgcgcga tttccggaat cgctgctgcc ggataaacga cagccgaagt gccaatcacg
     2281 aaacagaggt cgcaggctgc cgcacgtctt gcggccttct cgaacgcgcc ggccggcagc
     2341 atctcgccaa acaggacaac atccgggcgc atcgagctgc cgcattcaag acactcaggt
     2401 acgccgtcct gatgatctaa ctcgcgaaga cttatccccg catggcagct cagacagcgc
     2461 gcgcgccaga cactgccgtg aagttcaatg acgtctcgcg agccggccag ccaatgaagt
     2521 ccatccacat tctgcgtcac cagagtgaat tgctcgaatc gatcctgcca acccgcaatc
     2581 gtctcgtgcg ctgcattcgg cttcaaggta cgcagaacac cacggcgata gttgaaccac
     2641 tcccaaaccg ccggaaggtc cctctcgatc attgcgccgg aggaaatcac gtcgaacggc
     2701 atgcctttcc agaccgctga ctgccccccg ccgcgaaacg ttggcacgcc cgattcagcc
     2761 gaaacgcccg cgccggtcag cacgagtacg ttcctggctc gtgcgaaccg ctggcgcagc
     2821 tcatctgaga tcacctttgc acttgcgaac gcctgcatca ggaaatcgga tggtaacaga
     2881 gcgcggcgca cgcccgcaat ttcgcgaatc atcggcgatt cactacaata gcggctttgt
     2941 ttagttccct ctccgtctgg gagaagctag cggaaaaaag ttttctctgt gcaggctctg
     3001 tggtgctctg tgtctctgtg gtgaaagagc ctaataaaca caccacaaag gcacggagat
     3061 cgacagagag agtcacagag ttccttcttc ccagagggag agggcttttt ttggatttcc
     3121 atgaacttgc tcgatcttca aaacacaatc aagggcgcga tccgcgaaga agctcgcgcg
     3181 caattcgatg tcgaactcg
//
LOCUS       DATDBY010000483         2781 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2288539, whole genome shotgun sequence.
ACCESSION   DATDBY010000483 DATDBY010000000
VERSION     DATDBY010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2781
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2288539"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..667
                     /locus_tag="VIT19_08965"
     CDS             <1..667
                     /locus_tag="VIT19_08965"
                     /inference="COORDINATES: protein motif:HMM:NF012956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HEY5839153.1"
                     /translation="TKTITVKAALSKFNPFVAAGNAAIAGGSVLTGLRGSASIAAAGN
                     AGRSDNTRGGTQFLIPVPRINVALSANGGVVSASSTHLSGLYPALAVINGDRKGNNWG
                     TVNGGWNDGTRAAYPDSLEITFNSAKTIDEINVVTLQDNWQSNPGDPTLTTSASGEGI
                     LDFAVEYWNGDAWVAISNVTGNDKAWRQFTFAPVSTTKIRLVVTASRNNWSRVVELEA
                     FGQ"
     gene            699..>2781
                     /locus_tag="VIT19_08970"
     CDS             699..>2781
                     /locus_tag="VIT19_08970"
                     /inference="COORDINATES: protein motif:HMM:NF024972.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease family protein"
                     /protein_id="HEY5839154.1"
                     /translation="MTRRKSIRIAAFTVAIVAIVATSILIFSSSPGVEAAQGSPDRIW
                     NEVNVSSLVAPAGTRVIAPVKYRAVSINTSALQTTLARAPMEFTPAALAGRVEITLPK
                     PDGGYARFAAEESPVMEPVLAAKFPLIKTYRAQGIDDRSATARFGVSPSGFHAIVLSP
                     SGTYYIDPFRRGDTLNHISYFTRDYPNLSAEPFECQVFDKNGQPAPGLSAASAASLTA
                     AARPNGGNLKTYRLALAADFEYCDFHSDDTIPDKAEVMANGIIPTVNRVNSIYEREVA
                     VHMNLVANNDLILFNTPADPYVDNNGIQMLAANQATCDAIIGTLNYDIGHVVSTGGGG
                     VAFLGVICSVQKARGVTGLPQPTGDPFHVDYVAHEMGHQFGGNHTFNGTSGSCSGNEG
                     ASTAYEVGSGSTIQAYAGICTGQNLQSNSDDYFHGASYDEILDHIGSDGGTCAVTTST
                     GNNAPAVEAGTNYNIPKLTPFTLTATGSDPDGDSITYCWEEFDLGPGNDGRTDNGSSP
                     ILRSFNPTASPSRTFPRLGDLLNNTMRYGEILPMTERELNFRVTVRDNRASGGGVNYD
                     SMKVNVTDDAGPFVVSYPNGGEIWDQGQTRTITWDVANTNAAPVNAANVDIALSLDGG
                     LTFPVVLAAGVPNDGSQDVTVPSDSSGSARVRVMGSGNVFFDLSNANFMINPPPLPPI
                     ALNDVATTPFRT"
BASE COUNT          597 a          840 c          810 g          534 t
ORIGIN      
        1 gaccaaaacg atcacagtca aggcagcact cagcaagttc aacccatttg tcgcggcggg
       61 caacgcagca atagccggcg gctcggtgtt aactggtctg cgtggttcag catcgattgc
      121 cgctgcgggc aatgccggac gctccgacaa cacgcgcggc ggtacgcagt ttctgatccc
      181 agtgccccgc attaacgttg cccttagcgc gaatggcggc gttgtaagcg cttcgtccac
      241 gcacctgagc gggttgtacc cggcactcgc ggtcatcaac ggagatcgaa agggtaacaa
      301 ctggggaacg gtcaacggcg gctggaacga cggtacgcgc gccgcgtatc ccgattcgct
      361 cgaaatcact ttcaacagtg cgaagacgat tgatgaaatc aacgtcgtga cgctacagga
      421 caattggcaa agcaatccgg gcgacccgac gcttactaca tcagccagcg gcgaaggcat
      481 tctcgatttc gcggttgagt actggaacgg cgacgcctgg gttgccatca gcaacgtcac
      541 gggcaacgac aaggcttggc gccagttcac gttcgcgcct gtttcgacga cgaagatccg
      601 cctcgtcgta acggcatcca gaaacaactg gagccgcgtc gttgaactcg aggcgtttgg
      661 acagtaaagg cgcgttacgc aaacgcagga ggagaagaat gacccgacgg aaatcaattc
      721 gaatcgcagc attcacggta gcgatcgttg cgattgttgc aaccagcatt ctgattttct
      781 cttcttcgcc gggtgttgaa gccgcccaag gcagcccgga tcgcatttgg aatgaagtga
      841 acgtttcaag tctggttgct ccggcaggca cgcgagtgat cgcgccggtg aaataccgcg
      901 ccgtttcaat caacacttcc gccttgcaga cgacacttgc gcgcgcgccg atggaattca
      961 cgccggccgc gcttgccggg cgcgttgaaa tcactcttcc caaacccgat ggcggctacg
     1021 cgcggttcgc ggccgaagag tctccggtca tggaacctgt gctggccgcc aaatttccgt
     1081 taatcaaaac ctatcgcgcg cagggaatcg acgatcgttc ggcgacggcc cggttcggcg
     1141 tctcgccctc cggctttcat gcgatcgttc tctcgccgtc aggcacgtac tacatcgatc
     1201 cattccgccg gggcgacacg ctcaatcaca tcagctactt cacgcgcgac tatccaaacc
     1261 tgagcgcgga acccttcgag tgtcaggtgt tcgacaagaa cggccagccg gctcccgggt
     1321 tgagcgcggc cagcgccgca tcgctcaccg cggcagcccg cccgaatggc ggcaacctca
     1381 aaacgtaccg gctcgcgctc gcggcggact ttgagtactg cgattttcac agcgacgaca
     1441 cgattcccga caaggccgag gtgatggcga acggaattat tccgacggtg aatcgcgtga
     1501 actcaattta cgagcgcgaa gtcgccgtgc acatgaacct ggtcgcgaac aatgatctga
     1561 ttctcttcaa cacgccggcc gatccatacg tcgataacaa tggcattcag atgctggcgg
     1621 cgaaccaggc tacgtgcgac gcgatcatcg gcacgttgaa ttacgacatc ggtcacgtgg
     1681 tctcgactgg cggcggcggc gtcgcgtttc tcggcgtgat ttgcagtgtg cagaaggccc
     1741 gcggcgtaac cggattacca caaccgaccg gcgacccgtt ccatgttgat tacgtcgccc
     1801 acgaaatggg ccatcagttc ggcggcaatc atacgttcaa cggcaccagt ggttcgtgct
     1861 cgggtaacga aggcgccagc accgcttacg aagtcggaag tggctcgacg attcaggcct
     1921 acgccggtat ctgcaccggg cagaacttgc agtcgaatag tgacgactac tttcacggcg
     1981 ccagttacga tgagattctc gatcacattg gttcagatgg cgggacctgc gcggtcacga
     2041 cttcgaccgg taataacgcg ccggctgttg aagccggaac gaactacaac ataccgaagc
     2101 tgacgccgtt cacactgacg gcgaccggga gcgatcctga cggcgactcg atcacctact
     2161 gctgggaaga attcgacctg gggccgggca atgatggacg cacggacaac ggcagctcgc
     2221 caattttaag atccttcaac ccaaccgcca gcccttcacg cacatttccg cggctcggag
     2281 atttgcttaa caacacgatg cgctacggcg agattctgcc gatgaccgaa cgcgagctca
     2341 attttcgggt caccgtgcgt gacaaccgcg cgagtggcgg tggagttaac tacgactcga
     2401 tgaaggtgaa cgtcaccgac gacgctggtc cgttcgtcgt ctcttatccg aacggcggcg
     2461 aaatttggga ccagggtcag acgcggacga tcacctggga cgtcgcgaat accaacgccg
     2521 cgccggttaa tgcggccaac gttgatatcg cactgtcgct cgacggtggt ctgacgtttc
     2581 ccgtcgtgtt ggccgcaggc gtgcccaacg atgggtcgca ggacgtgacc gtaccgtctg
     2641 attccagcgg cagcgcgcgc gtgcgcgtga tgggaagcgg caacgttttc ttcgatctgt
     2701 cgaacgcgaa tttcatgatt aatccgccgc cgttgccacc aatcgccctg aacgatgtgg
     2761 ccacgacgcc gttccgcacg c
//
LOCUS       DATDBY010000484         2312 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2674298, whole genome shotgun sequence.
ACCESSION   DATDBY010000484 DATDBY010000000
VERSION     DATDBY010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2312
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2674298"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..844
                     /locus_tag="VIT19_08975"
     CDS             <1..844
                     /locus_tag="VIT19_08975"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY5839155.1"
                     /translation="TTTQDYPRMLTTIRQRERREGIRLSVIKIPIPPKNIEEITAAFE
                     RAITPRTRLIQISHQVNITGQITPVKAVCEMARRRGIETIVDGAHSFAQFDFKQADLN
                     CDYFGTSLHKWLYAPKGTGMLYVKRDKIAKIWPLFPAEEKQEADIRKFEEVGTHSAAP
                     RLAIGEAMLFHNGVGGKRKEARLRYLSRYWMDQLKGISGIRFNTSFDPAQMCAIANVR
                     VEGLDPVKIGSYLFARHRIFTTPIVHEEFQGLRITPNLYTTLKELDRFCGVMADIARK
                     GVPA"
     gene            complement(858..>2312)
                     /locus_tag="VIT19_08980"
     CDS             complement(858..>2312)
                     /locus_tag="VIT19_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839156.1"
                     /translation="EFRLSGPGGSEDDYIELYCNRDTDCDISGMSLRGYDPTQQGDFS
                     LTFPGQTVIPARYYLLVADSRGYTLVDYGFPDFDVALMQPSPDPPFLFYDNEGIQLIG
                     AGDPIIIDSVGFAGGGNDIQYVEGVGLQRASSRPADQYAYVRKRTIATIGLPQDTNDN
                     ANDFVLVSVTGDLHAGITNPPVLGAPGPQGLSSPISLTNAQLTGALTDPTKSTEVDPN
                     RVRVGSGNSGTLSLRRSFTNNSPYDGFFYISFRVIETSTLNSPNTPGGPQADLRLITS
                     NGTSAEVPSRGGTIPIFGTVLEYDELCACSEPQQPNGGGLNSTVYVDPGVSEGFPSTF
                     DAQFLFNVNKAGIYRFFVYAEAIPFSIFDESTAELTSSPARTGTTRPRSKSTTPRKFA
                     SAKRPQLAVSRKETLRTPVLTPMTGASTPPATSPATPPLTRLSAPRVIIINRGIAEGE
                     KKPRKKTRVRRKSSAALQKKAEEKFAVASEKPQN"
BASE COUNT          494 a          613 c          705 g          500 t
ORIGIN      
        1 gacgacgacg caggactatc cgcggatgct caccacgatt cgtcagcgcg aaagacgcga
       61 aggcatcagg ttgagcgtga tcaagattcc gatcccgccg aagaacatcg aagaaattac
      121 ggcggcgttc gagcgtgcca tcacgccgcg cacgcgtctg attcagatct cgcatcaggt
      181 caacatcacc gggcaaatta cgccggtcaa agcggtctgc gagatggcgc gaagacgcgg
      241 tatcgaaacg attgttgatg gggcgcactc gtttgcgcag tttgatttca agcaggcgga
      301 tttgaactgc gattatttcg gcacttcgct tcacaagtgg ttgtacgcgc ccaaaggaac
      361 gggcatgctc tatgtgaagc gcgacaagat tgcgaagatc tggcccctgt tcccggccga
      421 agaaaaacag gaggccgaca ttcgcaagtt cgaagaggtc ggcacgcatt cagcggcgcc
      481 gcgtctggcg atcggtgaag cgatgctgtt tcacaatggc gtcggcggca aacgaaagga
      541 agcgcgcctg cgttatcttt cccgctactg gatggatcaa cttaaaggaa tttcgggaat
      601 ccgcttcaac acatcattcg atcctgcgca gatgtgcgcg atcgcgaacg tgcgggttga
      661 aggtttggat ccggtgaaaa tcgggagtta tctattcgcc aggcaccgca tctttacgac
      721 gcccattgtc cacgaagagt ttcagggcct gcgcatcacg ccgaacctct acacgacgct
      781 gaaagaactc gatcgtttct gcggcgtgat ggcggacatc gcgcgcaaag gggtgcccgc
      841 ttagcccgcc cccaggttta gttctgtggc ttctcagacg cgactgcgaa tttctcttca
      901 gctttctttt gcagagccgc ggaactcttt cttctgacgc gggtcttctt ccgcggcttc
      961 ttctcgcctt cagctatccc tcgattaatg atgatgaccc gcggcgccga gagcctggtt
     1021 agcggcggag tggccggcga agttgccgga ggagtgctgg cccccgtcat cggcgtcaag
     1081 actggtgttc gcagtgtctc tttcctggag acagctaatt ggggtcgctt tgcgctggcg
     1141 aacttgcgtg gcgttgtcga cttggagcgg gggcgcgtgg tgccggtccg cgcgggcgaa
     1201 gacgtcaact cggccgtcga ttcgtcgaat atgctgaaag gaattgcttc agcgtataca
     1261 aagaaccggt aaatgccggc tttgttgacg ttgaacagga attgagcgtc gaaagttgaa
     1321 ggaaagccct cgctgacacc agggtcaacg tagaccgtgc tattcagccc gccgccgtta
     1381 ggctgctgag gttccgagca cgcacaaagc tcgtcgtatt cgagcaccgt gccaaaaatc
     1441 gggatcgtcc cgccgcggct tggcacctca gcggaggtgc cgttggaagt aatcaaacgg
     1501 aggtcggcct gaggaccacc gggggtgttc ggtgaattga gtgtgctggt ttcgatgacg
     1561 cggaaggaga tgtagaaaaa accatcgtag ggcgagttgt tggtaaagct gcggcggagc
     1621 gacaacgttc ctgagtttcc tgaccccacg cgcacgcgat tcggatctac ttctgtggac
     1681 ttggtcggat cggttagcgc ccctgttagc tgggcgttgg taaggctgat cgggctggat
     1741 agtccctgag gaccgggtgc gccgagcacg ggtggattgg taatgccggc atgaagatcc
     1801 cccgtgaccg ataccaggac gaaatcgtta gcgttgtcgt tggtgtcctg cggcagacca
     1861 atggtcgcta tcgttctttt ccgcacgtag gcgtactggt cggcgggacg agacgaggcg
     1921 cgctgtaagc ccactccttc gacgtactgg atgtcattac ccccgcctgc gaacccgact
     1981 gaatcaatga taatcgggtc gcccgcgccg ataagttgga ttccttcgtt gtcatagaac
     2041 aaaaagggcg ggtccggcga tggttgcata agagccacat caaagtctgg aaaaccataa
     2101 tctacgagtg tgtagccgcg gctgtcggcg actaagaggt aataccgtgc cggaattacc
     2161 gtttggcccg gaaacgtcaa cgagaaatca ccctgttgtg tcggatcata accgcgcaaa
     2221 gacataccgc tgatgtcgca gtcggtgtcg cgattgcagt agagctcgat gtaatcgtct
     2281 tcggatccgc ccggacccga taaacgaaat tc
//
LOCUS       DATDBY010000485         3136 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_854395, whole genome shotgun sequence.
ACCESSION   DATDBY010000485 DATDBY010000000
VERSION     DATDBY010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3136
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_854395"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..398
                     /locus_tag="VIT19_08985"
     CDS             <1..398
                     /locus_tag="VIT19_08985"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HEY5839157.1"
                     /translation="ELAFLNAGHNPPLIVHASGTMEQLAAGGLPLGIMADADFREGRT
                     TLNPGDVLVIYSDGVSEATSPTGEEFGPTRLYEAVARNLDASAAGIRDRIESALTKFA
                     QGTPAGDDITMVIVKRLAEASAVAAGTPS"
     gene            complement(453..1634)
                     /locus_tag="VIT19_08990"
     CDS             complement(453..1634)
                     /locus_tag="VIT19_08990"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5839158.1"
                     /translation="MRREIDNASGMTAETYDVAVIGAGAFGAWTAYRLQQLGNRVVLI
                     DGYGPGNSRSSSGDESRIIRMGYGGDEIYSRSAWRSLQVWKELFAHTGENLFHETGVL
                     WLAHEGDPYPASTFETLTNLHIPVEKLTLPELSTRYPQICHEGIGGAFLEPESGVLLA
                     RRAVQTVVREALKSGVEYLQDSIESPNNTGRVDKLVTGGGERISAAVYVFACGAWLPK
                     IFPDLLAERIHPTRQEVFYLGAPAGKRFQSPALPGWIDFKNEAYALPDIEGRGVKVAI
                     DRHGEAFDPDTNDRVASREGLAEVRRYLARRVPELQDAPVNESRVCQYENTSNGDFVI
                     DRHPDFENVWLVGGGSGHGFKHGPFVGEYVAARIDGRNEGVEPRFSLATKKREQKRVV
                     Y"
     gene            1850..>3136
                     /locus_tag="VIT19_08995"
     CDS             1850..>3136
                     /locus_tag="VIT19_08995"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HEY5839159.1"
                     /translation="MIKNELINSIKTQRARVGVIGLGYVGLPLVTEFARGGFNGTGFE
                     VDTEKAAKINGGESYIGDVESSQVKELIDNGKLHATTNFDELKDCDAIIICVPTPLRK
                     TKEPDVSYILAAAEEIQKRLRRGQLVILESTTYPGTTDEVLLPMLEGTGLKLDEDFLL
                     AFSPERVDPGNPEFKTHNIPKVVGGVTDDSTEAAAMLYGQIVRDVHAVSSARVAEAAK
                     LLENTFRAVNIGMANEMARLCYALGIDTWEVIRAAATKPFGFMPFYPGPGIGGHCIPL
                     DPHYLSWKARQHGFDSRFISLAEEVNSRMPEHVVQLVSDGLNDARKPMNGSRILLLGV
                     AYKKDIDDVRESPALSIIDRLRLKGCDVRYHDPFVAEIRFDDAHTDSGGEPLSSVGLN
                     DQEISAADCVVIVTDHSGIDYARVIELAPLVVDTRNA"
BASE COUNT          668 a          915 c          911 g          642 t
ORIGIN      
        1 gagagctggc gtttcttaac gcgggccaca atccaccgct tatcgtccac gccagtggca
       61 cgatggagca actggctgcc ggcgggttgc cgctgggaat catggcggat gcggattttc
      121 gcgaaggtcg cacgaccttg aaccccggtg atgtgctggt gatttattcg gatggagttt
      181 ctgaagcgac cagtccgacc ggcgaagaat tcgggccgac gcgtttgtat gaagccgtcg
      241 cgcgcaatct cgacgcttcc gcggccggca ttcgcgatcg aatcgaatcg gccctcacca
      301 agtttgccca aggtacgccg gctggtgacg acatcacgat ggtgatagtg aaacggctgg
      361 ctgaagcctc ggcagtagcg gctggtactc cgagttaatt gcaacaaact taagcgacac
      421 acgacacgca tactccgacg ccgtcaaact cactaataaa ccaccctctt ctgttcccgc
      481 ttctttgtgg ccaaactgaa tcgcggctca acaccttcgt ttcttccatc aattctcgcg
      541 gcgacgtatt cacccacaaa gggcccatgc ttgaacccgt gacctgagcc gccgcccacc
      601 agccaaacat tttcaaaatc gggatggcga tcgattacga agtcgccgtt tgaagtgttt
      661 tcgtattggc agacgcgcga ctcgttcacc ggcgcgtcct gaagttccgg aactctacgc
      721 gccagatacc ggcgcacttc ggccagacct tcacggctcg cgacgcgatc gttcgtgtcc
      781 ggatcgaatg cttcaccgtg gcgatcaatc gcgactttaa cgccgcggcc ttcaatgtcc
      841 ggcagggcgt aagcttcatt tttgaaatca atccaccccg gcagagccgg cgattgaaaa
      901 cgctttcctg cgggtgcgcc aagatagaaa acttcctgcc gggtcggatg aattctctcc
      961 gccagcaggt caggaaagat tttcggtagc catgcgccgc acgcgaacac ataaacagct
     1021 gctgaaatcc gttcaccacc gccggtgaca agcttgtcga cgcgtcccgt attattgggc
     1081 gactcgattg agtcctggag atactcgact ccggacttca acgcctcgcg cacgaccgtc
     1141 tgcacggccc gtcgcgccag cagcacgccg ctctcgggtt cgaggaacgc gccgccgatt
     1201 ccttcatggc agatctgcgg atagcgagtt gagagttccg ggagcgtcag tttttctacg
     1261 gggatgtgta ggtttgtcag agtctcgaag gtactggccg ggtaagggtc accctcgtgc
     1321 gccagccaaa gcacgccagt ctcgtgaaag aggttctcac cagtgtgcgc gaacaactcc
     1381 ttccatacct gtagcgatcg ccacgctgac cgcgagtaaa tctcgtcgcc gccgtaaccc
     1441 atccggatga tgcgcgattc atcgcccgag cttgagcggc tgttgcccgg gccgtaaccg
     1501 tcgatcagca cgacgcgatt gcctaattgc tgaaggcgat acgccgtcca ggcgccgaac
     1561 gcgccagcgc cgatgacagc aacgtcgtaa gtttcggcgg tcatgccgct tgcattatca
     1621 atttcgcggc gcaaaagtaa atgaactcgg ctgaccccct ctccgcaagc ggagaggggg
     1681 aagggggaga ggttggccgc ggcttaaccc caccccaacc cctccccaca cgtggggagg
     1741 gcgaagtacg tcgcgccggc ggaaccttga ctctgctgcg ggggctcatt aggcttggac
     1801 ttcatatatt cctgcccgta tgaaatcaat taagttggca taaacgttaa tgatcaaaaa
     1861 cgaacttatt aattcaatta agacccaacg cgcccgcgtg ggtgtgatcg gactgggtta
     1921 tgtcgggttg ccgctggtga cggaattcgc gcgcggaggc ttcaacggaa caggtttcga
     1981 ggtagatacc gagaaagccg cgaagataaa tggcggcgaa tcttacatcg gcgacgtgga
     2041 atcgtctcag gtcaaagagc tgatcgataa cggtaagctg catgccacga cgaatttcga
     2101 cgagctgaag gattgtgacg cgatcatcat ctgcgtgccg acgccgttgc ggaaaacgaa
     2161 agagccggat gtgtcgtaca tcctcgccgc ggccgaagag atccagaagc gtctgcgtcg
     2221 tggccaacta gtcattctcg agtcaacgac gtatccaggg acgaccgatg aagttttgct
     2281 gccgatgctg gaaggcacgg gactgaaact cgacgaagat tttctgctcg cgttctcgcc
     2341 tgagcgcgtc gatccgggca atcccgaatt caagacgcac aacattccga aagtcgtggg
     2401 tggcgtgacc gacgattcga ctgaagccgc cgcgatgctg tacgggcaga tcgtgcgcga
     2461 cgtgcacgcc gtcagctcgg cgcgcgtggc tgaagccgcg aagctcctgg aaaatacttt
     2521 tcgcgcggta aacatcggca tggcgaacga aatggcgcgg ctttgttatg cgctcggcat
     2581 cgacacgtgg gaagtgattc gcgccgcggc caccaagcct ttcggattca tgccgtttta
     2641 tcccggtccc gggatcggcg gccactgcat cccgctcgac ccgcactacc tttcatggaa
     2701 agcgcggcaa cacggtttcg actcgcgttt catcagcctg gccgaggaag tgaactcgcg
     2761 catgcccgag catgtggtcc aactcgtgtc cgacggcttg aacgatgcgc gcaagccgat
     2821 gaacgggtcg cgtattttgc tgctgggcgt cgcgtacaag aaagacatcg acgacgtgcg
     2881 cgagagtccg gcgctttcaa tcatcgaccg gctgcgcctg aaaggctgcg acgttcgtta
     2941 ccacgatccc ttcgtcgccg aaatacggtt cgatgatgcg cacacggata gcggtggcga
     3001 acctttgtcg tcggttgggt taaacgacca ggaaattagc gcggctgatt gcgtggtcat
     3061 cgtcacggat cacagcggca tagattacgc gcgcgtgatc gagcttgcgc cgctcgtcgt
     3121 cgatacgcgc aatgcg
//
LOCUS       DATDBY010000486         3217 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1876872, whole genome shotgun sequence.
ACCESSION   DATDBY010000486 DATDBY010000000
VERSION     DATDBY010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3217
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1876872"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..714)
                     /locus_tag="VIT19_09000"
     CDS             complement(<1..714)
                     /locus_tag="VIT19_09000"
                     /inference="COORDINATES: protein motif:HMM:NF044507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839160.1"
                     /translation="MSIYEAKPISLEKVKTYPLASRPSKVTIQDFARPITEESSLRDY
                     LSSLPNILAVQNLRELAARMRQARSLKKPIIWGLGGHVIKTGLAPIIIDLMKRGLVTA
                     IAGNGSVLVHDAEIAMVGSTSEDVDATLGEGVFGGADETGKLLNDAARSGASEGLGLG
                     ETVGRALMETKPRHAEHSLLCAAYENQVPFTAFITIGGDIAHFHPSADGGALGATSHT
                     DFRLLAELVRQMNGGGVYLN"
     gene            complement(771..1346)
                     /locus_tag="VIT19_09005"
     CDS             complement(771..1346)
                     /locus_tag="VIT19_09005"
                     /inference="COORDINATES: protein motif:HMM:NF024969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HEY5839161.1"
                     /translation="MTDRISTIVADSIETKRRFFAAHGSEVERAAEMISATLASGGKL
                     LIFGNGGSAADAQHIAGELVNRFLQERKALPAIALSTDGGILTCIANDTGFANVFARQ
                     IEALGREGDVCVAISTSGLSENIVVACEQARSQGIKVIGLLGRGGGKVATLCDLALIV
                     PSDDTQRIQETHNLIGHILCELIEVAMFPTK"
     gene            complement(1339..1797)
                     /locus_tag="VIT19_09010"
     CDS             complement(1339..1797)
                     /locus_tag="VIT19_09010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839162.1"
                     /translation="MDLALPNDFKEFLRLLRARGVEYLVVGGWAVIYHGYPRATDDLD
                     IWIAISPTNAERIVNVFREFGFDVPELSADLFLKDDSLIRIGVEPVRIEVMTSISGVN
                     FEECYSRRLETELNEEPVSLIDLRHLRQNKKASGRLKDLSDLENLPPAND"
     gene            complement(1965..>3217)
                     /locus_tag="VIT19_09015"
     CDS             complement(1965..>3217)
                     /locus_tag="VIT19_09015"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY5839163.1"
                     /translation="ETIRRADYVVDLGPGAGTHGGIVVARGTADDVARNPNSVTGLYI
                     SGERKIPVPTDRRLSNGKAIAIRGAHHNNLKDIDVSFPLALLTVVTGVSGSGKSTLVQ
                     DILYRALAKELYGSLAEPGAHQAIDGLEHLDKVIEIDQSPIGRTPRSNPATYTGLFTP
                     IRELYAMLPESRERGYKPGRFSFNVKGGRCEGCEGEGLKRIEMNFLPDVYVLCDVCRG
                     ARYNRETLSVKYKGKSIAELLDTTVEEALPVLENVPQIKQKLQTLLDVGLGYIKLGQS
                     ATTLSGGEAQRIKLAKELSKRATGRTVYILDEPTTGLHFADVHKLLDVLQRLVSLGNT
                     VIVIEHNLDIIKSADFIIDLGPEGGAHGGRVVACGTPEEVAAVKRSHTGQVLKPLLNG
                     TAKRDGAKHTSDPAHIAEESKKVA"
BASE COUNT          661 a          967 c          875 g          714 t
ORIGIN      
        1 attcagataa actccgccgc cgttcatttg ccgaaccaat tcagccagca aacgaaagtc
       61 cgtatgggat gtcgcaccca gcgcgccgcc gtcagcgctc ggatgaaagt gagcaatgtc
      121 tccgccgatc gtgatgaacg cggtgaacgg gacttggttc tcgtaagcgg cgcaaagcag
      181 agaatgttca gcatgtcgcg gtttggtttc catcaacgcg cggcctacgg tctcgcccaa
      241 acctaagcct tcgcttgcac cgctccgtgc ggcgtcattt agaagttttc cggtctcgtc
      301 agctccgcca aaaactccct cgcccagcgt tgcatcaaca tcttccgaag tcgaaccgac
      361 catcgcgatc tcggcgtcgt gcaccaggac cgaaccgttg ccggcaatcg ccgtgaccag
      421 cccgcgtttc atcaggtcga tgataatcgg tgccagaccg gtcttaatca catggccgcc
      481 aaggccccag ataatcggct tcttgagact gcgcgcctgg cgcatacgcg ccgccagctc
      541 gcgcagattt tggacggcca aaatgttcgg cagggacgaa aggtagtctc ttaacgatga
      601 ctcttcagtt atcggtctgg cgaaatcctg aatggtgact ttgctgggac gcgaagccaa
      661 cggataggtt ttcaccttct caagactaat tggcttggct tcgtaaattg acatggtggc
      721 tggtcggagc gcacgcatcc tgcgtgcggt gcgccggcat cctgccggcc ctacttagtc
      781 ggaaacatcg ccacttcgat cagctcacaa agaatgtggc cgatcaaatt gtgggtctcc
      841 tgaattctct gcgtgtcgtc gctgggaaca attaacgcca ggtcgcaaag cgtcgcaact
      901 tttccaccgc cccggcccaa taagccgatt accttgattc cctgcgagcg cgcctgctca
      961 cacgcaacga cgatgttctc tgacaggccc gacgttgaaa tcgccacgca gacgtcgcct
     1021 tcgcgcccca gcgcttcgat ctggcgcgcg aagacgttcg cgaatcctgt gtcgttggca
     1081 atacaggtga gtatgccgcc gtctgttgac agcgcaatcg ccggcagcgc cttccgctcc
     1141 tggaggaaac gatttaccaa ctcgccggca atgtgctgcg cgtcggccgc agatccgcca
     1201 ttgccgaaaa taagcagctt cccgcccgac gcaagcgtcg cagagatcat ctcggccgcg
     1261 cgctcaactt cggagccgtg cgcagcgaaa aagcggcgct tcgtttcaat gctatcggca
     1321 acgattgttg aaatgcgatc agtcattggc tggtggcagg ttctccagat cgctcaggtc
     1381 ttttagccgg ccgcttgcct tcttgttctg tcgcaagtgg cgcaaatcga ttaaactcac
     1441 gggttcctcg ttaagttcgg tttccagtct gcgagaataa cattcttcga aattcactcc
     1501 cgatattgag gtcatcactt cgatgcgcac tggttcgacc ccaattcgga taagactgtc
     1561 atccttaagg aatagatctg cggacaattc gggaacgtca aacccaaact ctctgaagac
     1621 attaacaatt cgttcggcgt tggtaggtga gatagcaatc cagatgtcca gatcgtcggt
     1681 tgcgcgcggg tatccatggt atataaccgc ccaaccgcca accaccaggt attcaacccc
     1741 tcgggcgcgt agcaatctca agaactcttt gaagtcgttc ggtagcgcga gatccatagt
     1801 tgattcgtct cagatattcc gcgtggcgca cgcgttcctg aggcgtgcgt gagtgccaat
     1861 aggctctatc agcggcgtcc gcttcttcga aggacgaaaa gacttcaaac actgagcggt
     1921 ccaacctgat tgagtcgata tccgaatcca tgcactgaat tatatcacgc gaccttcttg
     1981 ctttcttcgg caatgtgcgc cgggtccgaa gtgtgtttcg cgccgtcgcg cttcgcggtc
     2041 ccgttgagca gcggcttgag gacctggccc gtatgcgatc gcttcacggc ggcaacttct
     2101 tccggcgttc cgcacgcgac aacccttccg ccatgcgccc cgccttccgg cccgagatcg
     2161 atgatgaagt ccgcgctctt gatgatgtca agattgtgct cgatcacgat gaccgtgttg
     2221 ccgagactga cgagccgctg cagcacatcc agcagtttgt gaacgtcagc gaagtgcaaa
     2281 ccggtggttg gctcgtcgag gatgtaaacc gttctgcccg tcgcgcgctt cgacagctcc
     2341 ttggccagtt taattcgctg cgcttcgccg ccagacaagg tcgtggccga ctggccaagc
     2401 ttgatgtaac caagtcccac gtcgagcagc gtctgaagct tttgcttgat ctgcggcacg
     2461 ttctcgagca ccggcagggc ctcttcgacc gttgtgtcca acagctccgc gatcgattta
     2521 cctttgtact tcaccgaaag tgtctcgcgg ttgtaacgcg cgccccggca gacgtcgcac
     2581 agcacgtaaa cgtccggcag gaaattcatt tcgattcgct tcagcccttc gccctcgcag
     2641 ccctcgcagc ggccgccttt gacgttgaac gagaagcgac ccggtttata gccgcgctcg
     2701 cgcgactcag gcagcatcgc gtacagctcg cgaatcggtg tgaacaaacc ggtgtacgtc
     2761 gcggggtttg aacggggcgt ccggccaatt ggtgactgat cgatttcgat cactttgtcg
     2821 agatgctcaa gcccgtcgat cgcctggtgt gcgcccggct cagcgagcga accatagagc
     2881 tctttcgcca gcgcgcgata aagaatgtcc tggaccagcg tagatttgcc tgaacccgac
     2941 acgccggtaa caacagtcag caacgccaac ggaaaagaga catcaatgtc ctttaagtta
     3001 ttgtggtggg cgccgcgaat tgcgatggct ttgccgttcg acaggcggcg atcggtggga
     3061 acggggattt tcctttcgcc gctgatatag agaccggtta cggagttggg attgcgcgcc
     3121 acatcgtctg ccgtgccgcg cgccaccaca attccgccgt gcgtgcccgc gccgggacca
     3181 agatcgacaa catagtctgc gcgacgaata gtctcct
//
LOCUS       DATDBY010000487         2849 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2093848, whole genome shotgun sequence.
ACCESSION   DATDBY010000487 DATDBY010000000
VERSION     DATDBY010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2849
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2093848"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..855
                     /locus_tag="VIT19_09020"
     CDS             <1..855
                     /locus_tag="VIT19_09020"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEY5839164.1"
                     /translation="IYMVAEAVGGWWTGSLALMADAGHMLADVAALTLALMAVWFGSR
                     PATPGKTFGYHRLEILAAFINGVALVLIALFIFYEAYLRWFAPTPVRSGVMTAVAAGG
                     LAINLICARLLHSERHDDLNVRGAWLHIMSDALGSVGAIVAGVIITLTGWYAADALIG
                     MLIGLLIIWSSWHLIREATNILLEGTPAHISLAAVEDAILETDGVSNVHDLHIWTITS
                     GRDALSAHVIHAHSISQAVLLKELRTKLHDRFGVDHLTLQMETPDFEDDTFHFCHAGT
                     ACFRSERE"
     gene            885..2249
                     /gene="larA"
                     /locus_tag="VIT19_09025"
     CDS             885..2249
                     /gene="larA"
                     /locus_tag="VIT19_09025"
                     /inference="COORDINATES: protein motif:HMM:NF033504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050043 - lactate racemase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent lactate racemase"
                     /protein_id="HEY5839165.1"
                     /translation="MRWQAQRDTALDYSNREGYRKVKAPSSLRSAGALQIMPTIQLGY
                     GRNSIGFDYDPARFEVLAPGDHARPLTDGEIGAAIDHPIDSPPLEELIDAGDTVLIVA
                     SDATRATGSAQIINLLVRRLIQFGVMPADIAVIFATGIHRPVRDEEKAELLTPFIAQR
                     IRTIDHDAYDEGKLVQIGTAPDGTPIEVNRALKEFSKVILTGAVGFHYFAGFTGGRKS
                     ICPGLASARTIEGTHLLALDFERGGRRAGVGSGLLKGNAVSEECERVAAIIDPAFLVN
                     TIVDERGRPEQVFAGHWRSAHERACAAYAATHSQTIAEKREVVIVSCGGAPYDINMIQ
                     AHKALDMAAHACVDGGMIVLLAECGDGMGRPDFLKWFESEDSRALETRLREHYEVNGQ
                     TAWALLTKTERFRVHIVTALPEADTLKMHMSPTQAITSVMSELSPDARGYIMPRGAAL
                     LPLG"
     gene            2347..>2849
                     /locus_tag="VIT19_09030"
     CDS             2347..>2849
                     /locus_tag="VIT19_09030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839166.1"
                     /translation="MKTLCLLPLLLMLVLPVQNPPTPPPDGSQIAVLSFKWSKSRQAA
                     GASESDKPVPSRAVTSADKNLDRNARTNDPAGKRDPNADTLDARGQALEASVRSVEKK
                     DKTVDGFAYQVKLHNTSKQTVEVVFWEYQFIDAANPGNVARRQFLCGVKIKPDKEKEL
                     QAFEMSGP"
BASE COUNT          599 a          817 c          847 g          586 t
ORIGIN      
        1 atctacatgg tcgctgaagc ggtgggtggc tggtggaccg gatcgcttgc tttgatggcg
       61 gacgcgggcc acatgctcgc cgacgttgca gcgctgacgc tggcgttgat ggccgtctgg
      121 tttggctcgc gcccggcgac gcccggaaaa acttttggat atcaccggct tgaaattctg
      181 gcggccttca tcaatggcgt ggccctggtt ctcattgcgc tgttcatttt ttacgaagcc
      241 tacctgcgtt ggtttgcgcc gacgccggtg cgcagcggag taatgactgc ggtagcggcc
      301 gggggtctcg cgattaatct gatctgcgcg cggctgctgc acagcgaacg tcacgacgat
      361 ttgaacgtgc gcggcgcgtg gctgcacatc atgagcgacg cgctgggttc agtcggtgcg
      421 attgtcgccg gcgtcatcat cactctgacc gggtggtacg cggctgatgc gctcatcggc
      481 atgctgatcg ggctgctcat catctggagt tcgtggcact tgatccgcga agcgacgaac
      541 attctgctgg aaggaacgcc ggcgcacatt agcctcgcgg ccgtcgaaga cgccatcctg
      601 gaaacggacg gagtctcaaa cgttcacgat ctccacatct ggacgattac ttccggtcgc
      661 gatgcgttga gcgctcatgt catccacgct cattcgatat cacaggcggt gctgttgaaa
      721 gagttgcgga ccaaacttca cgatcgtttc ggcgtcgatc acttaacgtt gcagatggaa
      781 acgcccgact tcgaagacga cacctttcac ttctgccacg ccggcacagc gtgttttaga
      841 tcggaacgag agtaggagcg cccgcgagcg aagcgagctt tggagtgcgg tggcaagcgc
      901 agcgcgacac cgctttggat tactcgaacc gcgagggcta tcggaaagtg aaagcgccgt
      961 cgtcgcttcg ctctgccggc gcactccaaa ttatgcccac catccagctc ggttacggcc
     1021 gcaattcaat cggctttgac tacgacccgg cgcgattcga ggtcctcgct ccaggcgatc
     1081 acgcgcgccc attgaccgac ggcgagattg gcgccgcaat cgatcacccc atcgactcac
     1141 caccgctcga agaactaatc gacgccggcg acacggtttt aattgtcgcg tccgatgcga
     1201 cgcgcgccac gggcagcgct cagattatca atctgctcgt gcggcgtctg attcagttcg
     1261 gagtcatgcc ggctgacatt gccgtcatct tcgccaccgg gatccatcgt ccggtccgcg
     1321 acgaagaaaa ggctgagttg ctgacgcctt tcattgcgca gcgcatccgc accatcgatc
     1381 acgatgccta tgacgaagga aaactggttc aaatcggaac ggctcctgat ggcacgccca
     1441 tcgaagtcaa tcgggcactg aaggaattct ctaaagtgat tttgacgggg gcggtagggt
     1501 ttcactattt cgcgggattc accggcggcc gcaaatcaat ctgtcccggg ctcgcgtcgg
     1561 cccgcacaat cgaagggacg cacctgctgg cgttggattt tgagcgcggc ggacgtcgcg
     1621 ccggggtcgg ctcgggtttg ctgaaaggca atgcggtcag cgaggaatgc gaacgagtcg
     1681 ccgccatcat cgatccggca tttctcgtca acaccatcgt tgatgaacgc ggccggcccg
     1741 aacaagtctt tgccggccac tggcgaagcg cgcacgagcg ggcctgcgca gcctacgcgg
     1801 caactcactc gcaaacgatt gccgagaagc gtgaggtagt tatcgtcagt tgtggcggcg
     1861 cgccttacga catcaacatg attcaagcgc acaaagccct cgacatggct gcgcacgcct
     1921 gcgttgatgg cggcatgatt gttttgctgg ccgagtgtgg cgatggaatg ggccggccgg
     1981 actttctaaa atggtttgaa tctgaagatt cgcgggcgct ggagacgcgt ttgcgggagc
     2041 actacgaagt aaacggccag actgcctggg ctttgctgac gaagacggaa cgctttcgcg
     2101 ttcatatcgt caccgcgctg cccgaagcag acacgctgaa gatgcatatg agtccaactc
     2161 aagcaatcac atcagtaatg tcggaactct caccagacgc gcgcggctac atcatgccgc
     2221 gcggggcggc gttgttgccg ctaggctaaa gctttctcga aaacaccttg atgaagttac
     2281 ccgcaaagag ggacaatccg tccgccgaaa catctggcag aaacccaaat tgaaaggaga
     2341 cgtttgatga agactctttg cctgcttcca ctgctcctga tgttggttct tccggttcag
     2401 aatccgccaa ctccgccgcc ggacggaagc cagatcgcgg tgctcagttt caaatggtcc
     2461 aagagccgtc aggccgccgg tgcgtcggag tcagacaagc ccgttccgtc acgtgccgta
     2521 acttcagccg acaagaatct cgaccgcaat gcgcgtacta acgatcccgc cggcaagcgc
     2581 gatccaaacg cggacacgct tgatgctcga gggcaggcgt tggaagcgag tgtccgctct
     2641 gtggagaaga aagataaaac ggttgacggc tttgcttatc aggtgaaact ccataacacc
     2701 agcaagcaaa cggtggaggt cgttttctgg gaatatcaat tcatcgatgc agccaatccg
     2761 ggcaacgtcg cgcggcggca gtttctttgc ggcgtcaaga tcaaacctga caaagaaaaa
     2821 gagctacagg cttttgaaat gtcgggacc
//
LOCUS       DATDBY010000488         4419 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2537577, whole genome shotgun sequence.
ACCESSION   DATDBY010000488 DATDBY010000000
VERSION     DATDBY010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4419
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2537577"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1116
                     /locus_tag="VIT19_09035"
     CDS             <1..1116
                     /locus_tag="VIT19_09035"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5839167.1"
                     /translation="VSLVEGFNHYVDEKIADIGTNAFAVRKFSIDDFSSVAALNAARR
                     RNKDIRLEDVEALRVRGGAIGDVGAKAEVLGDIKYASTTLSRVRISATTANIADIERI
                     DAGTGRYFNKGEDDTRRRVCFIGADVAEKLFPRSEPLGQTIRMDGHAFQVIGVGKALG
                     SVFGQPRDMYVAVPLSTFLALYGSRRSLGIIATATSEETYQHAVDEARTVMRIRRRLG
                     PNEKDNFGIITPSAINELRDKIFGTIQVAAIGVTSISLVVGGIVIMNIMLVSVTERTK
                     EIGLRKSIGARRGDILKQFLAESTMLSLFGGAIGISIAYALAKLVAVITPVPTSLPLP
                     AVTAALLVSASVGLASGVYPAWRAAKLDPIEALRAET"
     gene            1200..2468
                     /locus_tag="VIT19_09040"
     CDS             1200..2468
                     /locus_tag="VIT19_09040"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5839168.1"
                     /translation="MKLFNSDIWENLWMALDTLRQHKLRSLLTILGVVIGTMTVIVIA
                     AFVSGIDARVSKEIEGFGTNSIYIYRFDPGFNFNPTQEERQRKPISYEDTLAIQNECP
                     SVTHAAAFMSPVDFFGGSFTPRVHVRYRDIEMTNATVQGASPTYFKMGVTNIAEGRYF
                     TEEDNAQRASVVVIGPDVANTLFPFSNAIDQSVTINGRLYRVVGVLTVRDVFLSGGED
                     PNNENKAVYMPYLTLRKLYPDVDDNFVVAQARPGMMKEAVEEVRDLLRRRRKVAFDAA
                     DNFGISTSEQIITQFKAITGGVFALMVAISSVGLLIGGIGVMNIMLVSVTERTREIGV
                     RKAIGARRRDIIVQFLIEAATLTGLGGLVGILLGSGIALLIKTIMPTYIPLWAPIVGF
                     VVSVGLGVGFGLWPAWKAARLNPIEALRFE"
     gene            complement(2471..3034)
                     /locus_tag="VIT19_09045"
     CDS             complement(2471..3034)
                     /locus_tag="VIT19_09045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839169.1"
                     /translation="MNKIILRMVFALSLLLAAIGVAAAQTPTQNINVTVHPASTVEER
                     VANEMKEKELRKAAEEKLAAAESARIAATNPKTVLGRARTVYVYSGTSFFEGVQLENE
                     LRKQEEIDAWQMAITEKGNIADIHIDIDRPLFTYTFTYKVTHRSTGIILATGKVTAFD
                     GNAAAPKLADRIIEEIRNAKGEVKPKK"
     gene            3261..3950
                     /locus_tag="VIT19_09050"
     CDS             3261..3950
                     /locus_tag="VIT19_09050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="NADAR family protein"
                     /protein_id="HEY5839170.1"
                     /translation="MTRHLFILAVFGVLLVGAFSVRSEAVGQRITRDARYPAHWWTPV
                     EDLKKPVWEILPQEAKPGEVILSKRNELGLLSNFAATPFTFHDKRYASLEGFWQAMLY
                     PEGPRDPRATYPGIEWKFTREQVSQMTAFEAKRAGDLAEENMRRMKIGWVSFEERRFA
                     YRPKQAGRHYRLIVAATRAKVLQNSEVKKVLLATGDLILRPDHHQEPNAPAAWRYFEI
                     LMNIRKELRRK"
     gene            4000..>4419
                     /locus_tag="VIT19_09055"
     CDS             4000..>4419
                     /locus_tag="VIT19_09055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839171.1"
                     /translation="MRLRIVLVTASLLVCFASTTAQKRRSTPPDPASLRASFLATFGN
                     DFELVQDKITSRSNESGGGDFWLAFVKARQPGYFTLQYSFKRDDKHYSHEEREIHITI
                     APRGCRRGPPSSGVYPRFCMGDTIIVPVLLSGGSGFEF"
BASE COUNT          924 a         1194 c         1257 g         1044 t
ORIGIN      
        1 gtgtcactcg ttgaaggctt caatcactat gtcgatgaga agatcgccga tatcgggacg
       61 aacgctttcg ccgtgcgaaa gttttcgatt gatgacttct caagtgtggc cgcgctgaac
      121 gcggcgcgcc gtcgtaacaa agacatccgc ctggaagatg ttgaagccct gcgcgttcgg
      181 ggcggcgcga ttggcgatgt gggtgcgaaa gcggaggtgc tcggggacat caagtacgcc
      241 tcgaccacgc tgtcacgtgt gcgtatcagc gccaccaccg cgaacattgc cgacatcgaa
      301 cgaatcgacg caggtactgg ccgctacttc aacaagggcg aagacgatac gcgccggaga
      361 gtgtgcttta tcggcgccga cgtggccgag aaattgtttc cgcgatctga gccgcttggg
      421 caaaccattc gcatggatgg tcacgccttc caggtaatcg gcgtcggcaa agccctgggc
      481 tcggtttttg gccagccgcg cgacatgtat gtggccgttc cgctctcaac ttttctcgcg
      541 ctgtacggtt cgcgccgctc gctgggcata atcgcgacgg ccaccagcga agagacgtat
      601 cagcacgcgg tcgacgaagc gcgcacggtg atgcgcattc gccggcggct gggaccgaat
      661 gaaaaggaca acttcggcat catcacacct tcggcaatca acgaactgcg cgacaaaatc
      721 ttcgggacaa ttcaagtcgc cgccatcggc gtgacgtcga tttcactggt cgtgggcggc
      781 atcgtcatca tgaacatcat gctggtcagc gtcaccgagc gcacaaaaga aatcggtttg
      841 cgtaagagca ttggcgcgcg acgcggcgac attttgaagc agttcctggc ggaatcaacg
      901 atgctctcgc tgtttggcgg cgcgatcggc atcagcatcg cgtacgcact ggcgaaactg
      961 gtggcggtga tcacgccggt gccgacgtct ctcccgctgc cggcagtgac tgccgcattg
     1021 cttgtttccg cgagcgtcgg attggcgtcg ggagtctatc ctgcgtggcg cgcggcaaaa
     1081 ctggatccga ttgaagcgct ccgtgccgag acctgatctt tgtactttgt actttgacgg
     1141 ctgattcaac gcgagctaca cgtcaaagta caaagtacga agtacaaagc acgacacgaa
     1201 tgaagctttt caattccgac atctgggaaa atctttggat ggcgctcgac acgctgcgtc
     1261 agcacaagct gcgctcgctg ctgacgattc ttggcgtggt gatcggcaca atgaccgtga
     1321 ttgtgatcgc ggcattcgtc tctggcatcg acgcgcgcgt ttcgaaagag atcgaggggt
     1381 tcggtacgaa ttcgatttac atctatcgtt ttgatcccgg cttcaacttt aatccgaccc
     1441 aggaagagcg gcagcgcaag ccaatctcgt acgaagacac cctcgcgatt caaaacgaat
     1501 gcccgtcagt gacgcatgcg gccgcattta tgtcaccggt tgatttcttt ggcgggagtt
     1561 ttacaccacg cgtccacgtg cgttatcgcg acatcgagat gacaaacgcg acagtgcaag
     1621 gcgcctcgcc cacgtatttc aaaatgggtg tgacaaacat cgccgaaggc cgctacttca
     1681 ctgaggaaga caacgcgcag cgtgccagcg tcgtggttat tgggcccgac gttgcgaaca
     1741 ctctgtttcc tttttccaac gcgattgatc agagcgtcac gatcaacggc cggttgtatc
     1801 gagtggtcgg cgtgctcacg gtacgtgacg tgtttctctc cggcggtgaa gatccgaaca
     1861 atgaaaacaa agcggtgtac atgccttacc tgacgctgcg aaaactgtac cccgacgttg
     1921 acgacaattt cgtcgtggcg caggcccggc ccggcatgat gaaagaagcc gtggaagagg
     1981 ttcgcgacct gctgcgccgt cgtcgaaagg tggcgttcga cgcggcggat aattttggta
     2041 tttcgacttc tgaacagatc atcacgcaat ttaaagccat caccggcgga gtgtttgctt
     2101 taatggtggc gatctccagc gttggcttgt tgatcggcgg catcggtgtg atgaacatca
     2161 tgctggtaag cgtgactgag cgcacccgtg aaatcggcgt gcgcaaggcc atcggtgcgc
     2221 gccgccgcga catcatcgtt caatttttga tcgaggcagc gacgctgacc ggcctgggcg
     2281 ggttggtcgg aattctgctc ggctcaggta tcgcgctgct catcaagacg atcatgccga
     2341 cttacattcc tctctgggcg ccgatcgtgg gttttgttgt ttccgtcggc ctgggcgtcg
     2401 gcttcggttt gtggcccgcc tggaaagccg cgcggctgaa tccgatcgag gctttgcggt
     2461 tcgaatgact ttacttcttt ggtttgacct cgcctttggc gtttctgatt tcttcgataa
     2521 ttcggtccgc aagtttcggt gccgccgcat tgccatcaaa cgcggtgacc ttgccggtcg
     2581 ccaaaatgat tccagtgctg cgatgagtga ctttgtaggt aaacgtgtac gtgaagagcg
     2641 gccggtcaat gtcgatatga atgtcggcga tgttcccctt ctcggtgatc gccatctgcc
     2701 aggcgtctat ctcttcctgt ttgcgtagtt cattttccag ttgaactcct tcaaagaacg
     2761 aggtgcctga atagacataa acggtgcgcg cgcggcccag tactgtcttg ggatttgtcg
     2821 cggcgattct tgcggattcc gcggcggcaa gcttttcttc agccgctttc cgcagttcct
     2881 tttccttcat ttcgttcgcc acgcgctctt cgacggtgct cgccggatgg acggtaacgt
     2941 taatgttctg agtcggggtt tgggccgctg cgactcctat cgccgccagc aacaagctca
     3001 acgcgaaaac cattctcagg attattttgt tcatcttcgt accccttcag tttagaatga
     3061 cgcttcttcg cgtcgctttt aaaatctgaa gctggttgag caacgctcgt gccgttggcc
     3121 cgtcgatgga attacgacag tctttcccgc tgagaagatt cagaaagatc gtgagcacaa
     3181 gaaaaaggaa tcaagtggag ccttattgct gcggctttga tcgctttggc gcatctttac
     3241 tttaaccagc acgatttaca atgactcgac atctcttcat cctggccgtc tttggagttt
     3301 tgcttgtcgg cgctttctct gtgcggtccg aggccgtagg ccaacggatc actcgcgacg
     3361 cgcgttatcc tgcgcattgg tggacgccgg tcgaagatct taaaaagcct gtttgggaaa
     3421 ttctgccgca ggaagctaaa ccgggcgaag tcattctctc aaagcgcaat gaacttggct
     3481 tactttcaaa tttcgcggcg acgcctttca catttcacga caaacggtac gcaagcttag
     3541 aaggcttctg gcaggccatg ttgtatcccg aggggccacg tgatcctcgc gcgacctacc
     3601 cagggatcga atggaaattc acgcgtgagc aagtgagcca gatgactgcg tttgaagcga
     3661 agcgcgcggg cgacctggcg gaagagaaca tgcggaggat gaaaatcggg tgggtcagtt
     3721 ttgaagaaag acgtttcgct taccggccga aacaagccgg ccgacactat cgtcttatcg
     3781 tggcggccac gcgggcaaaa gtgttgcaga attccgaagt gaagaaggtg ctcctcgcga
     3841 ccggcgatct aatcctgagg ccggatcatc atcaggagcc caacgcaccc gcagcctggc
     3901 gctactttga gatcctcatg aatattcgaa aggaactacg aagaaagtga gttttgtcgg
     3961 cttcctgcaa gaggtttccg tttctccgtt caacctaaga tgagacttcg aattgttctg
     4021 gtcacagctt ctttgctggt gtgtttcgct tcaaccaccg cgcaaaagcg gcgttccaca
     4081 ccaccggacc ctgcttcgct gcgggcgagt ttcctggcga ctttcggaaa tgatttcgaa
     4141 ctcgtacagg acaaaatcac ttcgcgttca aacgaaagtg gcgggggcga tttctggtta
     4201 gccttcgtaa aggcccggca accaggctat ttcactctgc aatacagctt caaacgtgac
     4261 gacaaacact attcacacga ggagcgtgaa atacatatca ctatcgcgcc cagggggtgt
     4321 cgccgcgggc caccgtcgtc gggggtctat cccagattct gcatgggcga cacgatcatc
     4381 gtgccggttt tgctttcagg aggatccggc tttgagttc
//
LOCUS       DATDBY010000489         7320 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1725292, whole genome shotgun sequence.
ACCESSION   DATDBY010000489 DATDBY010000000
VERSION     DATDBY010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 7320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7320
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1725292"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..922)
                     /locus_tag="VIT19_09060"
     CDS             complement(<1..922)
                     /locus_tag="VIT19_09060"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEY5839172.1"
                     /translation="MLEFSQMRVTIGQINTTNGDCEGNVGRILSAIERAKKDRSDLVV
                     FPEVTIQGYTSFDWFLDPDVVRHALDPLTKIIEATDGITAIVGTVRPSDQPTGRRLFN
                     SAAVIRDRKLIGFADKTLLPEYDVFDDPRYFEPARERRLFNLDMCAPAKLRTLTQPLP
                     EGEEQGGSDTTKLGIAVCEDFWNDKTFWKQRLYQNDPAQELIEMGANLLVSINASPFN
                     KGKMRVRCDMVSHRAKTARVPIVFVNLVGANDGIIFDGASIVSDAEGRIVLQAPPFEE
                     FVETVELECGVPDARCLSGEDIDTVHQALVL"
     gene            complement(1107..1709)
                     /locus_tag="VIT19_09065"
     CDS             complement(1107..1709)
                     /locus_tag="VIT19_09065"
                     /inference="COORDINATES: protein motif:HMM:NF014041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inosine/xanthosine triphosphatase"
                     /protein_id="HEY5839173.1"
                     /translation="MSTRQSPRTRIKRIALGSDRAAKIMAVRASIARIAEIDSGWRDA
                     TVVARPVKTDAPAMPLTDWELMSGARQRALAVRDQLIQQRLEVDLYVGLEGGFHSISV
                     EGEWHTFLRGWAYATDGERGSFGMSPSIEVPDAIVKDVIQGKRELGIVIDEFAGLRDV
                     RSRQGAWDVLSRDLITRSMSFEAALIAAFAPFYNAALYGR"
     gene            1849..3063
                     /locus_tag="VIT19_09070"
     CDS             1849..3063
                     /locus_tag="VIT19_09070"
                     /inference="COORDINATES: protein motif:HMM:NF012885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LeuA family protein"
                     /protein_id="HEY5839174.1"
                     /translation="MSVSELIYDWNTIEPQLQNPGRHIGFDDETLRDGLQSPSVSEPP
                     VEQKIELLHLMDALGIDTADIGLPGAGGAHAAGVEAMAREIVDQKLKIRPNCAARTHK
                     NDIIPILEISQRAGIPIEVCTFIGSSPIRFYAEDWTLDKLLQMTEEAVTFAVSEGAQV
                     MFVTEDTTRADPETIRALYTTAIRYGARAVCVCDTVGHATPDGAREVVKFVRGIIDEQ
                     GEKIRLDWHGHQDRGLGVINSIAAIQGGADQVHGSALGMGERVGNTPMDQLLVNLKLM
                     GWINNDLTRLREYCDKASEACEWTVPLNYPVFGKDAFRTATGVHAAAVIKSYRKGDTE
                     LADLIYSGVPAGLFGLKQVIEVGPMSGKSNVVYWLETRGVEATEDRVNRIYERAKQAS
                     SVLSEEELMTLV"
     gene            complement(3070..5016)
                     /locus_tag="VIT19_09075"
     CDS             complement(3070..5016)
                     /locus_tag="VIT19_09075"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEY5839175.1"
                     /translation="MGKRFYEFGEFRVDAIERVLLREGTPVTLPPKVFDTLLALVERN
                     GHIVEKEELLRQLWPDTFVEENNLSQYISAIRKALGDGRHEQRYIETVPRRGYRFAGG
                     VREVWEDREQLIGVSHTKMSLRIHEETGTSEAIVPVAVVQRAGIRRAVIAAAVIVLVF
                     STVFVTATILRRGDSVAASPLPIKTLAVLPLASGAGEDQFLGLSIADQLIAGFNQNLD
                     INIRPTNSVYRYLSIQRDAATAGRELKTDAVFAGEVQKIGDRIVVTIRLIATSDGKVL
                     WQAKQEGELKNTSKLTSTLVDKAAREVFAVSASSLKSVLAKPNTTSTAAHEAYVKGRY
                     YWNNRTAEGLHKSIGLFEQAITQDPNFALAHAGLADAYAFDHVEWTKAEAAARKALEL
                     DGALGQAHATIGFVRWFWLWDWAGAGREFKLAIAMSPDHATAHQWYGGYLASRYYARE
                     AKAELQRALELDPFSLPINADLAQMMYFLGDFDSAIEQCKQTLALDPNFVNAHMYLYQ
                     AYTLKGMYDEAVNEYFKVREIVGKNPNFEGEHEKALRSAYAANGIRGFWREKLKIDEP
                     VPVKINDPYQRAEYLALLGEKDEALTMLAEAIKRHDPPALFAKVNPMFKGLYEDSRFI
                     ALINRVDNLSQKTLETRTNGVGGE"
     gene            5326..5568
                     /locus_tag="VIT19_09080"
     CDS             5326..5568
                     /locus_tag="VIT19_09080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839176.1"
                     /translation="MRTIEVTVERSEVFIRRQARAPVFDWCEICGRRVRMITADEAAR
                     LAGVSVRVIYQKVESGELHVVEEPERSLLVCLDSIV"
     gene            5599..>7320
                     /locus_tag="VIT19_09085"
     CDS             5599..>7320
                     /locus_tag="VIT19_09085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839177.1"
                     /translation="MRNLTSLMFVALFVLVPVNLRPASAQGTLERSILGAVVEQQEQD
                     KTKDRTVVVEIKLDTTVDGVEVTLPEELVKAAMVVPLDGSKTVKGKDGITWTSDLPTT
                     TVRLRIDFPQSIADKLDKALKDGLKLKFKLGDEVIGTQTFKVTNAAPTSVFVELDKVG
                     MFPPKFHPGINSFSPYDGYTNEDGTWDVKLKTDKGPLDLPVSPVVTNEAFMRGAGYTP
                     PKRDLSLDQTYFDTPKKPKEPGPLGFIVPPDLPADAFIELKFVDQFGRLRVGAVVTAD
                     KFVDLGQPPFLITCTPKIFMGDKLCVCGFFPNQFTRGQLMLDGKPLGALAGSLDTIVF
                     QPKGLRPGRHIIDWNVDAFKSPTYSEFGRRQPPSTLEQVEFVLLEVQGTIDQNALYTG
                     QGTALRLKIIGSEEKLNIQLDNLTPEIVEVEGGASQVVTTSGGANNTVEKNVRGTKRG
                     NFNIKYRLALPPCPCNPGLTAETMELVGKVPDPPATSDAQPNTPPTPPRDNCELIFQE
                     CAKAEAEVYQLESDFEKAINGCRKGRGANDPAFYASCIDRTRARYRLKLKEAYQKELE
                     CYQRYQAC"
BASE COUNT         1655 a         2044 c         2033 g         1588 t
ORIGIN      
        1 cgagcaccag cgcctgatgc accgtgtcga tgtcttcgcc ggacaggcag cgcgcgtccg
       61 gaacgccgca ttccagttcg acggtctcga cgaattcttc gaacggcggc gcctgcaaga
      121 cgattcgacc ttcagcatct gaaactatgc tcgcgccgtc gaaaatgatt ccgtcattcg
      181 cgcccaccag gttcacgaag acaatcggga cgcgtgcagt cttcgcgcga tgcgaaacca
      241 tgtcgcaacg cacacgcatc ttgcctttat tgaagggcga tgcgttgatc gaaaccagaa
      301 ggttcgcgcc catctcaatc aactcttgcg ccggatcgtt ttgatagagc cgctgcttcc
      361 agaacgtctt gtcattccaa aaatcttcgc agacggcgat accgagcttc gtcgtgtcag
      421 aaccgccttg ctcctctccc tctgggagag gttgggtgag ggtgcgaagc ttagccggcg
      481 cgcacatgtc cagattaaac agtcggcgct cacgggcggg ttcgaagtaa cgcggatcgt
      541 cgaacacgtc gtactccggc aagagcgtct tgtccgcgaa accgatcagc ttccgatcgc
      601 gaatcactgc ggccgagttg aatagccggc gtcccgtcgg ttgatcgctc ggacggacgg
      661 taccgacgat cgcggtgatg ccatccgtcg cctcaatgat tttcgttagc ggatcgagcg
      721 catgccgaac gacatccgga tcgagaaacc aatcaaacga cgtgtaaccc tggatcgtta
      781 cttcaggaaa gacgacgaga tcggatcgat ccttctttgc ccgttcaatc gcgctcagga
      841 ttcgcccgac gttgccttcg caatctccgt tggtcgtgtt gatctggccg atggtaacgc
      901 gcatctgtga gaattctagc actgatgcgt gcctgttctt gagtgcgaca tgcggctttg
      961 ccgcagcaca ttgcggtaag cctatggctt accggtcgtc acgcaatgca ttcgaggctc
     1021 tgcctcgaat cggaggcgca gcctcagatc aatcacgacc ttccggaaag gcaaagcctt
     1081 tccgcagtgt gctgcggaaa agccgcttat cttccataca acgcggcgtt ataaaacggc
     1141 gcgaaggccg cgattaatgc cgcttcgaaa ctcatcgagc gagtaatcaa gtcgcgcgac
     1201 agcacatccc aggcgccctg acggcttctc acgtctcgga ggccggcaaa ctcgtcgatc
     1261 acgattccca attcacgctt cccctggatt acgtccttaa cgatcgcgtc cgggacttcg
     1321 atcgatggcg acatgccaaa gctgccgcgc tcaccatcag tcgcgtaggc ccaaccacgc
     1381 aggaatgtgt gccactcgcc ttcgacagag atcgaatgga atcccccttc gagaccgacg
     1441 tacagatcca cctcgagcct ctgctgaatc aactggtcgc gcacagccag tgcgcgttgg
     1501 cgcgcgccac tcatcaactc ccaatccgtg agcggcattg ccggggcgtc cgttttcacg
     1561 ggccgcgcca cgacggtcgc atcccgccat ccgctgtcga tttcggcgat gcgcgcaatg
     1621 ctggcacgca cggccatgat cttcgcggcc cggtctgaac caagcgcgat tcttttaatt
     1681 cttgttcgtg gcgattgtcg agttgacatc aacttcgcgc gttgttgtaa tcgaaacgac
     1741 gatggtcaga gtaccgactt cagtcgggct tttcgcgaga aacgaaagac ccgagacgtt
     1801 agcactctaa caaaagacaa actaaagttt gtactctaaa cacatctcat gtcggtctca
     1861 gaactaatct acgactggaa cacgatcgag ccgcaactgc aaaacccggg gcgtcacatt
     1921 ggctttgacg atgaaacttt gcgggacgga ttgcagtctc catccgtgtc cgagccgccg
     1981 gtcgaacaga agattgagct gctgcatttg atggatgctc tcgggatcga cacggcggac
     2041 atcggtctgc cgggcgccgg cggagctcat gctgccgggg tggaagcgat ggcccgcgaa
     2101 attgtcgatc agaaactgaa gattcggccc aactgcgccg ctcgaactca taaaaacgac
     2161 atcattccaa ttctggaaat ctcgcaacgt gccggcattc ccatcgaagt atgcaccttt
     2221 atcggctctt cgccgattcg tttttatgcc gaagattgga cgctcgacaa actcctccaa
     2281 atgaccgaag aagccgtcac gtttgcggtg agcgagggcg cgcaggtgat gttcgtcact
     2341 gaagacacga cccgcgcgga tccggaaacg attcgcgcgt tgtacacgac ggcgattcgg
     2401 tacggcgcgc gcgcagtatg cgtctgcgac acagtcggtc acgcaacccc tgatggcgcc
     2461 cgagaagttg tgaagttcgt gcgcggaatc atcgacgaac agggcgagaa gattcgactg
     2521 gactggcacg gccatcagga tcgcggcttg ggcgtcatca attcgatcgc ggcaattcaa
     2581 ggcggcgcgg atcaagtcca cggctcggca ctcggcatgg gcgaacgcgt cggcaacacg
     2641 ccgatggatc aactgctcgt gaatctgaag ctaatgggct ggatcaacaa cgaccttacg
     2701 cgcctgcgcg aatactgcga taaggcgtcg gaggcgtgtg aatggacggt cccgttgaac
     2761 tacccggtgt ttggcaagga tgcgtttcgc accgcgaccg gcgtccacgc tgcggccgtg
     2821 atcaagagtt accgcaaagg cgacaccgaa ctcgcagatc tgatctactc aggtgtgcct
     2881 gctgggctgt tcggactcaa gcaagtcatc gaagttggcc caatgagcgg caaatcgaat
     2941 gtcgtttact ggcttgaaac ccgcggcgtc gaagcaactg aagatcgagt caatcgaatc
     3001 tacgaacgcg cgaagcaggc ttcatcagtg ctcagtgaag aagagttgat gacactcgtt
     3061 tagaaacttt tattctccgc ccacaccgtt cgttctcgtc tctaatgtct tttgcgacag
     3121 gttatctacc cgattgatga gagcgataaa gcgcgaatct tcataaaggc ccttgaacat
     3181 cggattgact ttggcaaaga gagccggcgg atcatgcctc ttaattgctt cagccagcat
     3241 cgtgagggct tcatctttct cacccagcag agcaaggtat tctgctcgct gataaggatc
     3301 attgattttg accgggaccg gctcatcaat cttcagtttt tcacgccaga agcctcgaat
     3361 gccgttcgct gcgtaggctg agcgaagagc cttttcgtgt tcaccttcaa agttgggatt
     3421 cttgccgacg atctcccgaa ccttgaagta ttcatttacg gcctcgtcgt acatgccctt
     3481 caacgtgtag gcctggtaga ggtacatatg cgcattaaca aagttcggat ccagggccag
     3541 ggtttgtttg cattgctcga tcgcactgtc gaagtctccc aggaagtaca tcatctgggc
     3601 caggtcggcg ttaatgggca aggagaaagg atctaattcc aaggctcgct gcaactcggc
     3661 ctttgcctcg cgcgcgtaat accgagaagc gagatagccg ccataccatt gatgcgcggt
     3721 ggcgtgatca ggactcatgg caatcgccaa tttgaattcc cgacctgcgc ccgcccaatc
     3781 ccaaagccag aaccagcgca caaagccaat ggtggcgtgc gcctggccca gagctccgtc
     3841 cagttccaga gctttacggg cggcggcctc agcttttgtc cactcgacat gatcgaaagc
     3901 gtaggcatca gccaggccgg catgtgccaa cgcaaaattt ggatcttgag taatcgcttg
     3961 ttcaaagagg ccaatgctct tgtgcaaacc ctcagccgtg cgattgttcc agtaataccg
     4021 tccttttacg taggcttcgt gagcggccgt actcgtcgtg tttggtttgg ccagcacgct
     4081 tttaagcgaa ctggcggaaa ctgcgaagac ctcgcgagct gctttatcga ccagcgtact
     4141 tgttagcttt gaagtattct tcagctcacc ctcttgtttg gcttgccata aaactttgcc
     4201 gtcgctggtg gcgatcaggc gaatagtcac tacgatccgg tcgccgatct tttggacttc
     4261 gccagcaaac acggcatccg tctttaattc acggccggcg gttgcggcat cgcgctggat
     4321 cgacaggtag cggtacacag aattggtggg tcgaatatta atgtccaggt tttgattgaa
     4381 tccggcaatc agttggtcgg caatactgag accgagaaac tgatcttcgc cggcgccact
     4441 cgccagtggg agcacggcca gcgttttgat cggcaacggt gaagctgcga cggaatcacc
     4501 ccgtcgcagg atggtggcgg tgacaaagac cgtgctgaaa accagaacta tcaccgcggc
     4561 tgctatgacc gcccgtcgaa ttcctgctcg ttgcacaacg gcgacgggaa cgattgcctc
     4621 cgatgttccc gtctcttcat ggatccgcag gctcatcttt gtgtgggaga cgccgattag
     4681 ttgttctcga tcttcccaaa cttcacgcac tccgccggcg aagcgataac cacggcgcgg
     4741 cacagtctca atgtatcgct gctcgtgccg cccgtcccca agcgcctttc ggatagccga
     4801 gatgtactgg gaaagattgt tctcttcgac gaaggtgtct ggccagagct gtcgaagcag
     4861 ttcttccttt tcgacaatgt ggccgttgcg ctcgaccagt gccagcaggg tgtcaaaaac
     4921 tttaggcggc agcgtaaccg gcgtgccttc gcggagcagc acgcgctcaa ttgcgtcaac
     4981 gcgaaactct ccgaactcgt agaaacgctt acccatcggg ttcttcagaa ctaattcaga
     5041 agttcttaaa gacattcttt gcgtgatcgg gctagtttgc gcgacctgaa caccaggagg
     5101 cgggcggcgg acagccccgg atttgccgcg cattatacgt tgagaaaact tttcacagca
     5161 atcaagtcag gacccggaag gacgtgacgc tcaaacggcc gcctggaacc ggacccgatg
     5221 gaaattacgg caggcttgag taattggatt tgccttcgcc gagcggcgca cgcaaaaggg
     5281 accgcagcgc ttacgatttc attgttttag ccgcctatga agactatgag aacaatcgag
     5341 gtgaccgtcg agcgcagcga ggtctttatc aggcgccagg cccgtgcacc tgtctttgac
     5401 tggtgcgaaa tatgcggccg gcgcgtccga atgatcaccg cggacgaggc ggcccggtta
     5461 gcgggcgtta gcgtgcgggt gatctaccag aaggtggaaa gcggtgaatt acatgttgtc
     5521 gaggagccag aacgctcgct tctggtctgc ctcgattcga ttgtttgaag ttgatcgcca
     5581 gctttcggga gagatgttat gaggaacctt acatcactaa tgtttgtcgc gctgtttgtg
     5641 ctcgtgcccg tgaacttgcg gccggcttcc gcccagggaa ctctggagcg gagcattctc
     5701 ggggcggtcg ttgagcagca ggaacaggac aagaccaagg accgcacggt tgtggttgaa
     5761 atcaaactgg acacgacggt agacggcgtg gaagtgacgc tccctgagga gctcgtgaaa
     5821 gcggctatgg tggtcccact tgatggttcg aaaacagtga agggaaagga cggcatcacg
     5881 tggacttccg atctgccgac taccaccgtc cgactgcgaa ttgatttccc ccaaagcata
     5941 gccgacaagt tggacaaagc gttgaaggat ggtctcaagt tgaaattcaa gcttggcgac
     6001 gaggtgatcg gcacacagac cttcaaggtc acaaatgcgg ctccgaccag cgtgttcgtt
     6061 gagttggata aggtcggaat gtttccaccg aagtttcacc ccggaatcaa ctcgttctcg
     6121 ccttacgacg gatatacaaa tgaggatggg acgtgggatg tcaaactcaa aactgataaa
     6181 ggcccccttg accttcccgt gtctccggtg gtgaccaacg aagcctttat gcggggcgcg
     6241 ggctatacgc cgcccaaaag agatctttct ctcgaccaaa cttattttga cacgccaaag
     6301 aaaccgaagg agccgggtcc attaggcttt attgttccac cagaccttcc tgcggatgcc
     6361 ttcatcgaat tgaaattcgt ggaccaattc ggccggctcc gcgtgggcgc cgttgtgaca
     6421 gcggacaaat tcgtagatct tggtcagcct ccgttcctga taacctgcac gccaaaaatc
     6481 tttatgggcg acaagctttg cgtctgcggc ttcttcccaa accaattcac tcgcggccag
     6541 ttgatgctcg atggcaaacc cctcggcgcg ctcgccggat cgctcgacac gatcgtgttt
     6601 cagcctaagg ggctaagacc gggtcgccat atcatcgact ggaatgtaga tgcttttaaa
     6661 agcccgacat actctgagtt cgggcgccgt caaccgccat cgaccctgga acaggtagag
     6721 tttgtcctgc tggaggttca gggaacgatt gaccagaacg cgctttatac cgggcagggc
     6781 acggcgctgc gcctgaagat catcggcagc gaagagaagt tgaatatcca gttggataac
     6841 ctgacgccgg aaatcgtcga ggtggaagga ggcgccagcc aggtggttac gacctccggg
     6901 ggcgcgaaca atacggtcga aaagaacgtc cgaggaacca aacgcggcaa cttcaatatc
     6961 aagtatcggc tggcgctgcc gccttgtccc tgtaatccag gactaactgc agaaacgatg
     7021 gaactggtgg gaaaggtgcc cgatcctcca gctacttcag atgctcaacc gaacacgccg
     7081 ccaacaccgc cgcgcgacaa ctgcgaattg atctttcagg aatgcgcgaa agccgaggcc
     7141 gaggtatatc aacttgaaag tgattttgag aaagccataa atggttgccg caaaggccgc
     7201 ggagctaacg atcctgcgtt ctacgcgagc tgtatagatc gaacgcgcgc tcgctatcgg
     7261 ctcaaactga aagaggcata ccagaaggaa ttagagtgtt atcagcgtta tcaggcttgc
//
LOCUS       DATDBY010000490         3145 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2933761, whole genome shotgun sequence.
ACCESSION   DATDBY010000490 DATDBY010000000
VERSION     DATDBY010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3145
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2933761"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..909
                     /locus_tag="VIT19_09090"
     CDS             <1..909
                     /locus_tag="VIT19_09090"
                     /inference="COORDINATES: protein motif:HMM:NF012640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HEY5839178.1"
                     /translation="TERIDNLLGEPLTVPPSQPTIGQTTVHFQSNWPRPRFEAAVEKV
                     KEHIAAGDCYQAVISQKFAKPTAADPLAIYRALRATNPSPYMFLLRMGDETIIGSSPE
                     MLVRCHGQRLDYRPIAGTRRRGATEAEDWMLGEEMSSDEKEVAEHTMLVDLGRNDLGR
                     VSDYGSVKVEELMSIERYSHVQHLVTSLRSRLRDDLDRFDALRSCFPAGTVTGAPKIR
                     AMQIIDELEPAKRGVYAGSVLYVDYADNLDSCIAIRTIHLRDGVATVQAGAGIVADSV
                     PEREYEECVNKARALFRAIELAEKGL"
     gene            906..1556
                     /locus_tag="VIT19_09095"
     CDS             906..1556
                     /locus_tag="VIT19_09095"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0016018 - cyclosporin A binding [Evidence
                     IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY5839179.1"
                     /translation="MTLAKLFLFLAAMATAVFAQNPAPSADTLKKANARPVASPTPKV
                     EPFVGASVEQMTGQCVSLETEQGLIVFELLPNKAPETVRGFLNLAASGALDTTTFSRT
                     VKGFVIQGGNLSTSEKWSGELSARMQRSLPDEPNDVKHVRGIVSMARGDEPNSATTHF
                     FILVGDGPHLDGKFAAFGRVLRGIEVADSINRAPAEEEKPVSPVRITHATVSRCEK"
     gene            1546..2376
                     /locus_tag="VIT19_09100"
     CDS             1546..2376
                     /locus_tag="VIT19_09100"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY5839180.1"
                     /translation="MKSKRTLGQSASCVAVVFGLCLSACTGTFSDQPTPEAAKRFLKL
                     RGYNFDQPSFFRAASDGDVLAVNGFISAGIDINAKDGNDDTALTASSIRGDAKVVEAL
                     LRGGADVNAKGRNGWTALLLALSKKDGRIADLLLAQQHLDLKAQAPDGMNALMLAVWH
                     QQERAVQTLLARGVDVNHQDKDGDAAVHGAALYGNMKLLRLLLDGGADPNVKNELGGT
                     SLMWAAAYGHEGIVSMLLNRGADPKIQDVDGVTAAGWAAKNSRGSIELMLKAAERSRQ
                     "
     gene            2570..3133
                     /locus_tag="VIT19_09105"
     CDS             2570..3133
                     /locus_tag="VIT19_09105"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEY5839181.1"
                     /translation="MLLVIDNYDSFTYNLVQYLGELGERIEVRRNDEVTVEQIEAMKP
                     DRMLISPGPGTPAEAGVASAVIEKFAGQLPILGVCLGHQAIGQVFGGRVVRAAQLFHG
                     KSSQVQHDGRTIFNGLENPFPAGRYHSLIVERETLPDELEISATTPNGTLMGLRHRRL
                     KIEGVQFHPESIMTTEGKKLLANFLSL"
BASE COUNT          704 a          814 c          959 g          668 t
ORIGIN      
        1 actgagcgaa tcgacaacct gcttggtgag ccgctaactg ttcctccaag tcagccgaca
       61 atcggacaaa caaccgttca cttccaatcc aattggccaa ggccacggtt cgaagcggcg
      121 gtcgaaaagg tgaaagagca catcgcggcc ggcgactgtt atcaggcagt catctcccag
      181 aaatttgcca agccgacggc cgctgatcct ttggcgattt atcgtgcgct gcgtgcgacg
      241 aacccttcgc cttacatgtt cctgctgcgc atgggcgacg agacaatcat cgggtcatcg
      301 cctgagatgc tggttcgctg tcacggtcag cgtttggatt accgtccgat tgcgggaacg
      361 cggcgacgtg gcgcgactga agcggaagac tggatgctcg gcgaagagat gagcagcgat
      421 gagaaagaag tcgccgagca cacgatgctt gtggatctgg gtcgaaacga tttgggacgt
      481 gtttcagatt acggctcggt gaaagtcgaa gagctgatgt cgatcgaacg ttattcgcac
      541 gtgcaacatc tggtgaccag cctgcgctcg cgcttgcgtg acgacctcga tcgattcgat
      601 gctttgcgtt cgtgttttcc agcgggcaca gtcaccggcg caccaaagat tcgggcaatg
      661 caaatcatcg atgagctgga acccgcgaag cgcggcgttt acgcaggatc cgtgctttat
      721 gtcgattacg ccgacaacct ggattcgtgt atcgccatcc ggacgatcca tctgcgtgac
      781 ggcgtcgcaa ccgtccaggc gggcgccggc attgttgccg actcagttcc cgagcgtgaa
      841 tacgaagaat gcgtcaacaa agcgcgtgcg ctatttcgcg cgatcgagtt ggctgagaaa
      901 ggcctatgac actcgctaaa cttttcttgt tcctggcggc tatggcgacg gcggtctttg
      961 cgcagaaccc cgcgccgagc gcggacactt tgaagaaagc gaacgcgcgc ccggttgcgt
     1021 cgccaactcc aaaggttgag ccattcgtcg gcgcttcagt tgagcagatg acgggccagt
     1081 gcgtatcact cgaaaccgaa caaggcctga tcgtgtttga gctgttgccg aacaaagctc
     1141 ctgaaaccgt gcgcgggttt ttgaacctgg cggcttcggg cgcgctggac acgacaacct
     1201 tcagccgcac ggtgaaaggt tttgtgattc agggtggcaa tctttcaacg agcgagaagt
     1261 ggagcgggga actgtcggca agaatgcaac gttcgttgcc cgacgagccg aacgatgtga
     1321 aacacgttcg cggaatcgtt tcgatggcgc gtggcgacga gccgaatagc gcaacgacgc
     1381 acttctttat tcttgtcggc gacgggccgc acctggacgg aaagtttgcg gcgttcggtc
     1441 gagtgctgcg cgggattgaa gtcgccgact cgatcaaccg ggcaccggcg gaagaagaga
     1501 aacccgtttc gccggtcaga atcactcatg caacggtttc gcgctgtgaa aagtaaacga
     1561 acgctgggtc agtccgcgag ttgcgtcgca gtcgtattcg gcctgtgcct gagcgcctgt
     1621 accggcacct tcagtgacca gccgacgccg gaagcggcga agcgatttct aaaactgcgc
     1681 gggtataact tcgaccagcc gtccttcttc agagccgcat ccgatggtga tgttctcgcg
     1741 gtaaacggtt ttatcagcgc cgggattgac atcaacgcga aggatggaaa tgacgacacg
     1801 gctttaaccg cgagctcgat tcgaggggac gccaaagtgg tggaagccct gctgcgcggc
     1861 ggcgccgatg tgaatgctaa gggtcggaat ggatggaccg cccttctgct ggccctttca
     1921 aaaaaagatg gcaggatcgc cgatctcttg cttgctcaac agcatctcga cttgaaagct
     1981 caggcgccgg acggtatgaa cgcgctaatg ctggcagttt ggcatcagca ggaacgagcg
     2041 gtgcaaacat tgctcgcccg tggcgtagat gtgaatcatc aggacaagga cggcgacgcg
     2101 gctgtgcacg gtgcagcgct ttacggaaat atgaagctgc tcaggttgct gctcgacggc
     2161 ggagcggatc cgaacgtcaa gaacgagttg ggaggcacgt ccctaatgtg ggcggccgca
     2221 tacggacacg aggggattgt aagcatgctg ctaaatcggg gtgccgatcc gaagattcaa
     2281 gatgtagatg gcgtgacggc ggcgggttgg gcggcgaaga atagtcgcgg cagtatcgaa
     2341 cttatgttaa aggctgcgga acgcagccgt cagtagtcag tagtcagtag tcagtagtca
     2401 gtagttcgtt gtcagttgtc ctattgttct ttgtacttgg ttctttgtac tttgatgtgt
     2461 catcccacag ccctttaaat tgagggcggg cctggctgaa gaaatcaaag taccaagtac
     2521 gaagtacaaa gcactaacga tcgtgcaact gacaactgac caatgaccca tgcttcttgt
     2581 aatcgacaac tacgattcgt ttacttacaa cctcgtacag tacttgggtg aactaggcga
     2641 gcggatcgag gtgcggcgta atgatgaggt caccgtcgag cagatcgagg cgatgaagcc
     2701 tgatcgaatg ctgatttcgc cgggaccggg aacgcccgcc gaggcaggcg tcgcctcggc
     2761 cgtgatcgag aagtttgccg gccaacttcc tattctcggc gtttgtttgg ggcaccaggc
     2821 aatcgggcag gtgtttggcg gacgagtggt gcgggcggcg cagttattcc atggaaaatc
     2881 gtcacaggtt cagcacgacg gccgaacgat cttcaacggt ttggaaaacc ctttcccggc
     2941 gggccgatat cactcgctga tcgtcgagcg agagactctc ccggacgaat tggagatttc
     3001 tgcgaccaca ccgaatggaa cactcatggg tttgcgccat cgcagactta agatcgaagg
     3061 cgttcagttt catccggaat cgatcatgac gacggaaggt aagaagttac tcgcgaattt
     3121 tctgagtctc taagtctgaa gttcg
//
LOCUS       DATDBY010000491         2578 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1659886, whole genome shotgun sequence.
ACCESSION   DATDBY010000491 DATDBY010000000
VERSION     DATDBY010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2578
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1659886"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..482
                     /locus_tag="VIT19_09110"
     CDS             <1..482
                     /locus_tag="VIT19_09110"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEY5839182.1"
                     /translation="IGLYIPAIESAYINIQAPNEAGSLGMFQFTQKTGAHFGLTPLDL
                     LDVDKSADAAARYIMRSMKTFKNDPMKEALAILAYNRGGGNVERDLALLVTSENAACS
                     ICALTANSHKLDATFQNENVYYVPRFFAAAIIGENPQAFGLQTQPLSSFEASRSRLW"
     gene            881..1102
                     /locus_tag="VIT19_09115"
     CDS             881..1102
                     /locus_tag="VIT19_09115"
                     /inference="COORDINATES: protein motif:HMM:NF041212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin"
                     /protein_id="HEY5839183.1"
                     /translation="MALVIYTKPGCPYCQQAREYYNSKGLTFVDRDAQTDKEFRAQML
                     KYSGGDPTVPCIVKDGKYVQSGWGDPLRG"
     gene            1231..>2578
                     /locus_tag="VIT19_09120"
     CDS             1231..>2578
                     /locus_tag="VIT19_09120"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839184.1"
                     /translation="MKRTISLLFLLLSISLVNSLTALAQDGNGNSSGKLNPPMTEKKA
                     KVTDIHGEKLMDNYFWLREKKNPAVIAHLESENAYTTAMMKHTEALQEKLYNEILSHI
                     KQTDVNVPYKRGDYFYYTRTVEGQQYPIFCRKLRSLDAPEQIVIDVNELAKGHKFMSV
                     GAFVPSDDGNLLAYSTDSTGYRQYTLQIKNLTTGELLPERIERINNVAWVADNKTIFY
                     VTEDAVTKRNDKLFRHVLGTDKYDLIYEEKDELFDIGVGKSRDNAVIMLGSYSKTSTE
                     GRYIPANNPNAEWKIIIPRQKDHEYDVDHRDGLFYIRTNKGAKNFRVVTAPVSDPSEK
                     NWKEFVAHRPAVKVEGIDTFADHAVLSEWENGLQHIEIVEFKSNKRHRIAFPEPVYAA
                     GLTSNAEFNTAVLRYNYQSLTTPSSVFDYDMNSRQAVLKKQTEVPGGFDKNNYKAER"
BASE COUNT          633 a          730 c          693 g          522 t
ORIGIN      
        1 tgatcggtct ttacatcccc gcgatcgaat ccgcttacat caatattcag gctccgaacg
       61 aggcgggttc gttaggcatg tttcagttca cacagaagac cggcgcgcat ttcggattga
      121 cgccccttga ccttctcgac gttgataagt cagccgatgc cgccgctcgt tacatcatgc
      181 ggagcatgaa gacattcaaa aatgatccga tgaaagaagc tttggcgatc cttgcctaca
      241 accgcggtgg aggaaacgtc gaacgcgatc tcgccctgct ggtgacgtct gaaaatgcgg
      301 cttgcagtat ttgtgcgctt accgctaaca gccacaagct ggatgctacg tttcagaatg
      361 agaatgtcta ttacgtaccg cgattttttg ccgcggccat cattggcgag aacccacagg
      421 ctttcggctt gcaaacacag cctctctcgt cgtttgaggc gtcgcgaagc cgtttgtggt
      481 gaaacggccc gcgcgttaag cccgtcagta ccgtaacgga cgctggaact ccctctccct
      541 tttgggagag ggaacaaaca aacactcgca tctgagaaat tctcgtccct ctggggttgc
      601 ggcgcgtcaa atatccggcg cggctaaaag tttcatcccg gaggggctaa tccggaaaac
      661 ctactggctg cgccaaagga cgagcgatga ggcacgctcg tcctttttct ttggagtgcg
      721 tgccggagcg cggccatcct ggccgcaagc gtgcggagcg cgttcaaggt attcgcgcta
      781 tgcgctcagg cgggcaggat gcccgcgctc cagtgtgcgc tccaaatctc ctacccactc
      841 tgctagaatc agccttcgca attcgggagg tgttccagcg gtggcattag tgatctacac
      901 aaaacccggc tgtccttact gccagcaggc ccgcgagtac tacaactcga aaggcctcac
      961 gttcgtcgat cgtgacgcgc aaaccgacaa agaatttcgc gcccagatgc tcaagtattc
     1021 aggcggcgat ccgaccgtac cctgcatcgt aaaggacggt aagtacgttc agtccggctg
     1081 gggcgacccg ctgcgcggtt gaaccgtaca cgactgacga gcggtcgctc gccaaacaaa
     1141 atggaactgc ctgacgggcg cgcggttcaa ctaatcgact taatctaaga actcgccggc
     1201 taccgcgggc ggttttacct ggagacttca atgaaacgca ccatctctct tctgttcttg
     1261 cttctctcga tttcgctggt aaattcgttg actgcgctgg cgcaggatgg aaacggaaat
     1321 tcgtccggca aactcaatcc gccaatgact gaaaaaaagg ccaaggttac tgacatccac
     1381 ggcgaaaagc tgatggacaa ttatttctgg ctgcgcgaaa agaagaaccc ggccgtgatc
     1441 gcgcatctcg aatctgagaa cgcgtacacg acggcgatga tgaagcacac cgaagctttg
     1501 caggagaagc tctataacga gattctcagc cacatcaaac aaaccgacgt gaacgtgccg
     1561 tacaagcggg gcgattactt ctattacaca cgcacggtcg aagggcagca gtatccgatc
     1621 ttttgccgca agctgcgcag cctggacgcg ccggaacaga tcgtgatcga cgtgaatgaa
     1681 ctcgcgaaag gccacaagtt catgtccgtg ggggcgtttg ttccgagcga cgatggcaat
     1741 ctgctggcgt actcaaccga cagcaccggc tatcgccagt acaccctgca gattaagaac
     1801 ctgaccacgg gcgagctgct gccggaacgg attgagcgca tcaacaacgt agcgtgggtc
     1861 gcagacaaca agacgatctt ctacgtcacc gaagatgccg tcaccaagcg caacgataaa
     1921 ctgttccgcc acgtgctggg caccgacaaa tacgatctga tttatgaaga aaaggacgag
     1981 ctgttcgata tcggcgtcgg caaatcgcgc gacaacgcgg tcatcatgct cggatcgtac
     2041 agcaagacct caaccgaagg tcgttacatt ccggcaaaca atccgaacgc ggaatggaag
     2101 atcatcatcc cgcgacagaa ggaccacgag tatgacgtcg atcaccgcga tggtctgttc
     2161 tacattcgca cgaacaaggg cgccaagaac tttcgcgtcg tgacggcgcc ggtcagcgat
     2221 ccttccgaaa agaactggaa agaattcgtc gcccaccggc cggcggtaaa agtcgagggc
     2281 atcgatacgt ttgcggacca cgccgtcctt tccgagtggg aaaacggctt gcagcacatt
     2341 gagatcgtcg aattcaaatc caacaagcga catcgcattg cgtttcctga gccggtttat
     2401 gccgccggcc tgacctcgaa tgccgaattc aacacggcag ttctgcgtta caactatcag
     2461 tcgctgacga cgccgagttc agtgttcgat tacgacatga attcgcgtca ggcggtactc
     2521 aagaaacaga ctgaagtgcc cggcggcttc gacaagaaca actacaaagc tgagcgcg
//
LOCUS       DATDBY010000492         3431 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2084653, whole genome shotgun sequence.
ACCESSION   DATDBY010000492 DATDBY010000000
VERSION     DATDBY010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3431
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2084653"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..367)
                     /locus_tag="VIT19_09125"
     CDS             complement(<1..367)
                     /locus_tag="VIT19_09125"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839185.1"
                     /translation="MKFVDDSQNLRTRLGIVQAVVLLLLAVLAVRLYFLQVVKGAKYA
                     EVAVNQRLRRLPSPAQRGAIIDRNGLLLVDSRPIYNILLSREDTKNIDRNSLIQPLAH
                     GLNIDPQMLRERFDQVKTQP"
     gene            complement(451..1011)
                     /gene="mreD"
                     /locus_tag="VIT19_09130"
     CDS             complement(451..1011)
                     /gene="mreD"
                     /locus_tag="VIT19_09130"
                     /inference="COORDINATES: protein motif:HMM:TIGR03426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HEY5839186.1"
                     /translation="MRQLKIAIVLLVAIALPSALAAIWKPLASFDFVLVLVVYFALQR
                     EPLNALFIGAVGGLATDALTRGLLGAYGFSHVVTAYAVYFVASRVMLDTTLLRIPVLA
                     AAALIDNLVYFGMNRLLGQSTSMPFAQALSYKLVATTVLGTLLLYVHDNYFSDKARHR
                     RQFSTRRRDARRSSGLFGRKRRTTSR"
     gene            complement(1167..2069)
                     /gene="mreC"
                     /locus_tag="VIT19_09135"
     CDS             complement(1167..2069)
                     /gene="mreC"
                     /locus_tag="VIT19_09135"
                     /inference="COORDINATES: protein motif:HMM:TIGR00219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEY5839187.1"
                     /translation="MAAIRTQREIRQRAPWWFFGLLALNFALMTFDARDESTKQRKIR
                     TVAQSIAYPFQWTAFSIGNLVGGLFGGVGELRRASTENHQLRAQVEQMQNELRDTRQK
                     ASEAERLEKLLKLNEQTTYTAITAQVIARDPSLWFDSITINKGRGAGVEINMPVVTAD
                     GIVGRIVSTSPLSAQIMLITDEKSGAGAVVGQLGQSNAIGSIKGMGENGLLDMRYVSG
                     LEKVQLGDIVYTTGQDGIYPPGYSVGPVVELRSGTATQAQVIHIRPSAGLDRLKEVVV
                     LQYRPTKTPELDQSLPNVEKPSRQ"
     gene            complement(2159..3205)
                     /locus_tag="VIT19_09140"
     CDS             complement(2159..3205)
                     /locus_tag="VIT19_09140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002621977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEY5839188.1"
                     /translation="MAFKSIFSLFSSDLAIDLGTANTLVYAKGRGIVVSEPSIVAINK
                     VTNAVEAVGRDAKEMLGRTPGNIVAIRPMKDGVIANFEVTEKMLQHFIRKAHNGKTWV
                     SPRVVIGIPSEITQVERRAVEDSAYRAKASEVYLVEEAMAAAIGAGLPITEPHGNMVV
                     DIGGGTTDIAVISLSGIVYSRSVRVAGNEMDEAITQYIKRKYNLLIGERTAEAIKIEL
                     GSAFPLDEELSYEVRGRNLIEGIPKTVTITDEEIREALADSISTIINAVRVALERTPP
                     ELSADIVERGIVLTGGGALLKNLDKRLSIETGLPVSVAEDPLASVVLGTGKMLSDFDL
                     LKRVKWDNSLTTGT"
BASE COUNT          758 a          950 c          945 g          778 t
ORIGIN      
        1 ccggttgtgt cttcacctga tcaaatcgct cgcgcaacat ttgcggatcg atattgagcc
       61 catgcgccag cggctgaatc agcgaattgc gatcgatgtt cttggtgtct tctcgggaaa
      121 gcagaatgtt gtagatgggt cttgagtcaa ccaacaacag tccgttgcga tcgatgatcg
      181 cgccgcgttg cgcgggactt ggcaatcgtc tgaggcgttg gttgacggca acctcggcgt
      241 atttcgcgcc tttgacgact tgcagaaagt agaggcgcac ggccagaacg gcgagcagca
      301 acaacacgac ggcctgcacg atgccaaggc gcgtcctaag attttgcgag tcatcgacga
      361 acttcatatc tagtttagag taccaacttt agttgggctt ttcaccaggc cagaaccgac
      421 taaagtcggt acgctggacg cctgttacca ctaacggctg gtggttcttc tttttctgcc
      481 gaacaatccg gaactgcgac gagcgtcgcg ccgccgggtt gagaactggc gacggtgtct
      541 cgctttgtcg ctgaagtaat tgtcgtgcac gtaaagcagg agcgttccca ggacggttgt
      601 cgcgactagc ttgtacgaca gcgcctgcgc aaacggcatt gacgtcgact gtcctaacag
      661 ccggttcatt ccgaagtaaa cgagattgtc gatgagcgcc gccgccgcca gcaccggaat
      721 tcgcagcagc gttgtgtcca gcatgacgcg cgacgcgacg aagtaaacgg cgtaagccgt
      781 cactacgtgc gagaaaccgt acgctcccaa caatccgcgg gttaacgcgt cagtcgcaag
      841 tccgccgacc gctccgatga aaagggcgtt cagcggctcc cgctgcaacg cgaaatacac
      901 gaccagcacc aacacgaaat caaaggatgc cagcggcttc caaatcgccg ccaacgccga
      961 tggcaaagcg atggcgacca gcagcactat ggcgattttc agttggcgca tagctgaaag
     1021 agtgagcagt gagcagtgag cagtgaacag taaaagctcg tttgtaacca ggcgtcggga
     1081 ctaaatcgat tcagcttctt cacgaattga ttacctgagg agtgttgata attcgatagc
     1141 agaggtcgcc ctcttctgcc ccctgcctac tgcctgctgg gtttttctac gttcgggaga
     1201 gattgatcca gctccggagt cttcgtcggg cgatactgaa gaactacaac ttctttcaaa
     1261 cgatcgaggc cagcgctcgg ccggatgtga attacctggg cctgtgtagc agtgccggac
     1321 cgcagttcaa caaccggccc gaccgagtag ccgggaggat aaatcccgtc ctggcccgtc
     1381 gtgtaaacaa tgtcgccgag ctgcaccttc tcaagcccgg aaacataacg catgtccaac
     1441 agcccattct cgcccatgcc cttgatggac ccgatggcgt ttgattggcc taactgtcca
     1501 acgacggcgc cggcgcccga cttctcatcg gtgatcagca tgatctgagc gctcaagggg
     1561 ctggttgaaa cgatgcgacc gacgatgcca tcggccgtga cgaccggcat attaatttcc
     1621 acgcctgccc ctcggccttt gtttatggtg attgagtcga accacagcga aggatcgcga
     1681 gcgatgacct gcgccgtgat tgcggtgtac gtcgtctgct cgttcagctt cagaagtttt
     1741 tcaagacgct cagcctctga ggctttctgt cgcgtatcgc gcaactcgtt ctgcatctgc
     1801 tcgacttgtg cgcgaagctg gtggttttcg gttgaggcgc gccgtagttc gccgactccg
     1861 ccgaagagac ctccgaccag gttgccgatt gaaaaggcgg tccactgaaa gggataggcg
     1921 atgctttgcg cgaccgtacg aatctttcgc tgtttcgtcg attcatcgcg cgcatcgaag
     1981 gtcatcagcg caaaattcaa cgccagcagc ccaaaaaacc accagggggc gcgctgtcga
     2041 atttcgcgtt gagtccgaat tgccgccatt gtggaatttc gaattttgaa tttcggattt
     2101 cgaatttact tccggcagcg gcgacaattc gcaatccgaa atccgcaatt cgcaatggtt
     2161 atgtgccggt cgttaaacta ttgtcccatt tcacgcgttt gaggagatcg aaatctgaaa
     2221 gcatcttgcc ggtgcccagc acgactgacg cgagcggatc ttcagcgacc gaaacgggca
     2281 ggccggtttc gatcgatagt cgcttgtcga ggttcttcag taaagcgcct ccaccggtca
     2341 gcacaatgcc gcgttcgaca atgtccgccg acaattccgg aggcgtacgt tccagggcta
     2401 cgcgtacggc gttaatgatg gtggagattg agtccgccag cgcttcgcga atttcttcgt
     2461 cggtaatcgt gacggttttc ggaatacctt cgatcaggtt gcgaccgcga acttcgtatg
     2521 acagttcctc atccaacgga aacgccgagc cgagttcaat cttgatcgct tcggccgtgc
     2581 gctcgccgat cagcagattg tattttcgtt tgatgtactg cgtgatcgct tcatccattt
     2641 cgttgccggc gacgcgcacc gaacgcgaat agacgatgcc gctcagactg atcacagcga
     2701 tgtcggtcgt cccgccgcca atgtccacaa ccatgttgcc gtgcggctcg gtgatgggca
     2761 gaccagcccc gatcgcggca gccatcgctt cttcaaccag ataaacttcg gacgctttcg
     2821 ctcgatacgc cgaatcttca accgcgcgtc gttcgacctg ggtgatttca gatgggatgc
     2881 cgatgacaac gcgtgggctg acccaggttt tgccattgtg agctttgcga atgaagtgct
     2941 gaagcatctt ctccgtcact tcaaagttcg caattacgcc atctttcatc ggccggatcg
     3001 cgacgatatt gcccggtgtg cggcccaaca tctctttcgc gtcgcgcccg acagcttcga
     3061 ccgcgttggt gactttgttg atcgcgacga tcgacggttc agaaacgaca atgccgcgac
     3121 ccttggcata aaccagcgtg tttgcggtgc cgagatcgat cgcgagatcg ctggaaaaaa
     3181 ggctaaaaat agatttgaaa gccatctatt aagatttccc tgactggaga ttggaacgcc
     3241 ggaagaggtg agcggtgatt tttccgtacc aacttgaagc cgtctgactt cgcgagcggg
     3301 ttcttcgaaa gccgcaaaca actcaccgag ggcaaacaaa gatacaacta ttcgttctgt
     3361 aatgctatcg gtaaatgaaa gcagcgacga aaagttttgt ggctttgcgc gatgtttggc
     3421 ccaggagcaa c
//
LOCUS       DATDBY010000493         2030 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_940865, whole genome shotgun sequence.
ACCESSION   DATDBY010000493 DATDBY010000000
VERSION     DATDBY010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_940865"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1282
                     /locus_tag="VIT19_09145"
     CDS             <1..1282
                     /locus_tag="VIT19_09145"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEY5839189.1"
                     /translation="VSFFLLLALTFLATVDMAFGQLSDVGLRRLAAEAEEHPKARYAP
                     LLNEILENRSRFSFTLSAAIQILLVAFTVLVTFVSLRWFSRAAVGLIVSLAVTLVLAA
                     IFRQFIPRLISLRNPESKLVRLLPWVAPFYRVLGFAAEPWHRSFDRMRKDDVEEDVSE
                     EDEEDNGDDIEALIDVGEAEGIIEEEERELIQSAIEFGDTRVGEVMTPRTEIVGLPSN
                     ATVRQARDLIIESRHSRLPVYRDQIDNIEGIVYVRDLLPLLSLGKSDSPITPFIRPVY
                     FVPETKPVDKQLQEMQKARTYMSIVIDEYGGVAGLVTVEDILEEIVGEIEDEDISGQE
                     LEIVPAGDGVYEVLGSTEIGKIERLFDMEIEADDFTTIAGLVMAEKGSVPRTGEQLTL
                     RGLEVEVLDADEKRIGRLRLKQATESQPVGKATG"
     gene            1380..>2030
                     /locus_tag="VIT19_09150"
     CDS             1380..>2030
                     /locus_tag="VIT19_09150"
                     /inference="COORDINATES: protein motif:HMM:NF014027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HEY5839190.1"
                     /translation="MAKKQSKFLRGRRIDPKPITRTTKLVDLVDNAFVAYNAARLREA
                     CGLFAEKMLEPDTTVGVTLTGALTPAGLGMSALIPLIKAGFIDWIISTGANFYHDTHF
                     GLGLSMHEGSAQTSDVVLREEEVVRIYDIFFDYSVLLDTDAFFRRMIEADEFQKAMST
                     AEFHYRAGRYVLERERKLGIKNKSLLAAAHEHAVPLYTSSPGDSSIGMNVAAKALQG"
BASE COUNT          420 a          551 c          614 g          445 t
ORIGIN      
        1 cgtcagcttt ttcctgctgc tggcgctgac atttctcgct acggtggaca tggctttcgg
       61 ccagttgagc gacgtcggat tgcgtcgtct cgcggccgaa gccgaagaac atccgaaagc
      121 gcgctacgcc ccgctgctca acgagattct cgagaatcgt tcgcgattca gtttcacact
      181 ttcagccgcg attcagatcc tgctggtggc cttcacggtc ctggtcacgt tcgtgtcctt
      241 gcgttggttt tcacgtgcgg ccgtgggcct gatcgtgtca ctcgccgtga ccctcgtcct
      301 cgcggcaatc tttcgccaat tcatcccgcg gctgatctct ttgcgtaatc ccgagtccaa
      361 acttgtcagg ctgctgccct gggtcgcgcc gttttatcgc gtgctgggtt ttgcggccga
      421 accctggcat cgctcgttcg atcggatgcg caaggacgat gtggaagaag acgtttcgga
      481 agaggatgaa gaagacaacg gcgacgacat cgaagctcta atcgatgtcg gtgaggcgga
      541 aggcatcatc gaagaggaag agcgcgaact gattcaatcg gcgatcgaat tcggcgacac
      601 gcgcgtgggc gaggtgatga cgccgcgcac ggaaattgtc gggctgccga gcaacgcgac
      661 cgtgcgtcag gcgcgcgatc tgatcatcga atcgcgtcac tcgcgcctgc cggtttatcg
      721 tgatcagatc gacaacatcg agggcatcgt ttacgtgcgt gacttgttgc cgctgctgtc
      781 cctcggtaaa tcggattcgc cgatcacgcc ttttattcgg cccgtttact ttgtccctga
      841 gaccaagccg gtcgacaagc agctgcagga aatgcagaag gcgcgcacgt acatgtcgat
      901 cgtgatcgac gaatacggcg gcgttgcggg tctcgtgacc gtcgaagaca tcctcgaaga
      961 aatcgtgggc gagatcgagg acgaagacat cagcggtcag gagttggaga tcgtgcccgc
     1021 gggcgacggg gtgtacgagg ttctgggcag cactgagatt ggaaagatcg aacggctatt
     1081 cgacatggaa atcgaagcgg acgacttcac gaccattgcg ggtttggtca tggctgagaa
     1141 gggaagcgtg ccgcggacag gtgaacaact gacgcttcgc ggtctcgaag tcgaagtgct
     1201 cgacgctgat gagaaacgga tcgggcgact gaggttgaag caagcgactg agtcccagcc
     1261 tgtcgggaag gcgactggct gatccgttta ccggcacgta agtgtttttt acgttgacaa
     1321 caattcactc ctcgccgact atcgttcttc gcgataattc actcctcaac tgagaagcgt
     1381 tggcaaagaa gcaaagtaaa tttctgcgcg ggcggcggat cgatccgaaa cccatcacgc
     1441 gcacgacgaa gctggtcgat ctggtcgata acgcgttcgt cgcttataac gcggcgcgtc
     1501 tgcgggaagc gtgtgggttg tttgccgaga agatgctcga gcccgatacc accgtcggtg
     1561 tgacattgac gggcgcgttg accccggcgg gcctcggtat gtcagcgctg attccgctta
     1621 tcaaagccgg ttttatcgac tggatcatct caaccggcgc caacttttat cacgatacgc
     1681 actttggtct cggcctctcg atgcacgaag gcagcgcaca gacgtcggac gtcgtgctgc
     1741 gagaagaaga ggtggtcagg atctatgaca tcttctttga ttactcagtt ctgctcgaca
     1801 ccgacgcgtt ctttcgccgg atgatcgaag cggacgaatt tcaaaaggcg atgtccaccg
     1861 ccgagtttca ctatcgcgcc ggccgttatg tgctggaacg cgaacgaaag ctggggatca
     1921 agaacaaatc gttactggcg gcggcgcacg aacacgcagt gccgctctac acttcatctc
     1981 ccggcgattc gtcgattggc atgaacgtcg cggcgaaggc tttacaaggc
//
LOCUS       DATDBY010000494         2501 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1257272, whole genome shotgun sequence.
ACCESSION   DATDBY010000494 DATDBY010000000
VERSION     DATDBY010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2501
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1257272"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VIT19_09155"
     CDS             complement(<1..332)
                     /locus_tag="VIT19_09155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839191.1"
                     /translation="MMKSIALALTFLIPDRLPSLIVLVGFWIPPAVAGWIAAEFLSHS
                     TKRYRAAVTYAALAIFVLGSAAAWFFFNLSRIPPYLPGATMDPTFAPPEAVAGLAVVT
                     CALILPGSS"
     gene            complement(473..859)
                     /locus_tag="VIT19_09160"
     CDS             complement(473..859)
                     /locus_tag="VIT19_09160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839192.1"
                     /translation="MRDNHEGMPEIVQAFEREGQYFGVVGITLGDTSKQFQFGVSVDG
                     YRALTKILQLRPFDFMPGLKHRHFFAQSYGKIPGSSDYKTDIRVELGRDGKQIEVRVP
                     KDLLTNLVWFSEIKDLDEAAHLPEFT"
     gene            964..1758
                     /locus_tag="VIT19_09165"
     CDS             964..1758
                     /locus_tag="VIT19_09165"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011996181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEY5839193.1"
                     /translation="MLLVIDIGNTNTSLGVFDGDKLLTHWRLTTARARTVDEWGVHAR
                     NLFALADLDFKQISGIAIASVVPPVNFTLKRMAETYFHLTPMFIDDTVDTGVPILYEP
                     PSDVGADRIVDAVAAIKKYGAPCIVVDFGTATTFDAINPKGEYLGGVITPGITISSDA
                     LFERAAKLPRVEIKRPQKVIGSATVEAMQSGLYHGYVGLVDGILKKMIDELGRNPRVI
                     ATGGLAPLIARGSKFIQEVDETLTLEGLRLVYERTCQKSSVGAKSL"
     gene            1887..>2501
                     /locus_tag="VIT19_09170"
     CDS             1887..>2501
                     /locus_tag="VIT19_09170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839194.1"
                     /translation="MNYFSYFSEIEDTFIRRRGKHLMLSPIDWALIESWKERGVPLHV
                     AVRGIEHSFDSYESKKHKRTVKTLLYCQEEVEAQYAEWRESRVGSHEPADEASALPAD
                     KSPFSRDAILDHLARSLEEIQQLATNRKQEDSFGEALTRAVALLTEIRDDYSSSANPN
                     TRKLEESLTGIDRLLDDSIRAVLKETELASILSEIDSQIKPYKRH"
BASE COUNT          591 a          696 c          688 g          526 t
ORIGIN      
        1 gagctgccag gcagtatgag cgcgcacgtt acgacggcga gtcccgcgac ggcctctggt
       61 ggggcgaacg ttggatccat tgtggctccg ggcaagtacg gagggatgcg gctgaggttg
      121 aagaagaacc acgccgccgc agagcccaag acgaaaatcg ccagggctgc gtacgttact
      181 gccgctcggt agcgcttggt gctgtggcta agaaactcgg ccgcgatcca gccagctacc
      241 gcggggggaa tccagaagcc gacaagaaca atgaggctgg gaagtcgatc agggatcagg
      301 aaggttagtg ccaaagcgat tgacttcatc atgaaccctt cgaagtgttg cgggctagcg
      361 tctgagttgg cctgccggcg cgaatcaaag cacccgccgc cgcaccaaga agtcagtacc
      421 gggagcggta gcgaccgggt atgtctttca cgttcgtgcg gcagaacgaa cattacgtga
      481 attcgggcaa gtgcgccgct tcgtcaagat ctttgatctc cgagaaccaa accaggttag
      541 taagcaagtc cttcggcacg cgaacctcaa tttgcttgcc gtcgcggccc agctcaacac
      601 gaatatcggt tttgtaatcc gagctacctg gaatcttgcc gtacgactgc gcaaagaaat
      661 gtctatgttt cagtcccggc ataaaatcaa aaggtcggag ttgcagaatc ttcgtcagcg
      721 cacgataacc gtcaactgag acgccaaact gaaattgctt agatgtgtct cccagcgtta
      781 ttccgacaac accaaaatat tgaccctccc tttcgaacgc ttgaacgatt tcgggcattc
      841 cctcgtgatt gtcgcgcata tctcggatgt agagatggaa tccaactaca tattatccgt
      901 actcgccttg ataatactcc tcttccgcat tatcttgccc cgtcctgcta atatcctgaa
      961 ttcatgcttc tggtaatcga catcggcaac acgaacacgt cgctcggcgt ttttgacggc
     1021 gacaagctgc tgacgcattg gcgtctgacg acggcgcgtg cgcgcacggt tgatgagtgg
     1081 ggcgtccacg cgcggaatct cttcgcgctc gccgatctcg atttcaaaca aattagcggg
     1141 atagcgattg cctcagtcgt gccgccggtt aacttcactc tgaagcggat ggccgaaacg
     1201 tactttcacc tgacaccgat gtttatcgac gacaccgtcg acacaggcgt tccgattctt
     1261 tacgagccgc cttccgacgt tggcgccgat cgcatcgttg acgcggtcgc ggccattaag
     1321 aaatacggcg cgccgtgtat cgtcgtcgat ttcggaacag caacaacttt cgacgcgatc
     1381 aatccaaagg gcgaatacct cggcggtgta atcacgcccg gcatcacgat ttcttccgac
     1441 gctctgtttg agcgcgccgc gaaattgccg cgtgttgaaa tcaagcgccc ccagaaagta
     1501 atcgggtcgg cgacggtgga agcgatgcag tccggcctgt accacggcta cgttggcctc
     1561 gttgatggca tcctgaaaaa gatgattgac gaactggggc gcaacccacg tgtgatcgcg
     1621 accggtggct tggcgccgct gattgcgcgc ggctcaaagt tcattcagga agttgacgag
     1681 acgctcacgc tggagggatt gcgcctcgtg tacgaaagaa cgtgccagaa aagctccgta
     1741 ggagcgaaat ctttatagat cagggttgca gcctatacca aagctccgta ggagcggcat
     1801 gtgggatgcc gctcctgcgg agctttgaat tgaataacga tactggtgct ataaacattg
     1861 cgctcctacg gagctgaaaa aagcgcttga attacttttc ctacttctcc gaaatcgaag
     1921 acactttcat tcgccgtcgc ggcaagcact taatgctcag cccgatcgac tgggctctga
     1981 tcgaaagttg gaaagaacgt ggtgtgccgc tgcacgtggc ggtgcgaggc atcgaacact
     2041 ctttcgattc gtacgaatcg aagaagcaca agcgcaccgt caagacgctt ctgtactgtc
     2101 aggaagaggt tgaggcgcag tacgcagaat ggcgcgaatc cagagtaggc agccacgaac
     2161 ctgcggacga ggcgtccgcg ctcccagctg acaagtcccc gttctcgcgc gacgcgatcc
     2221 tcgatcacct cgcccgatct ctcgaggaaa tccagcagct cgcaaccaat cgaaaacagg
     2281 aagactcgtt cggcgaagcc ttaactcgtg cggttgcgtt gttgaccgaa atccgcgacg
     2341 actactcaag cagcgcaaac cccaacacgc gcaagctgga agaatcttta acggggatcg
     2401 atcgtttgct cgatgactcg atccgcgcgg tcctaaagga aactgaactt gcctcgatcc
     2461 tttccgagat cgattcgcag ataaagccgt acaaacgtca c
//
LOCUS       DATDBY010000495         6538 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_869416, whole genome shotgun sequence.
ACCESSION   DATDBY010000495 DATDBY010000000
VERSION     DATDBY010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6538
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_869416"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="VIT19_09175"
     CDS             <1..372
                     /locus_tag="VIT19_09175"
                     /EC_number="4.2.2.n1"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEY5839195.1"
                     /translation="RFGVTNIFDPKQNIDAGSRYMKWLLNRFQGNLSLALAGYNAGEG
                     AVDKYGWRIPPYAETQEYVRRISRRYNLLRDPNAAIYAPTVSRSQVARLNSKEPAPLT
                     MYERSVLTVRLPDGRLQLMTQ"
     gene            502..1098
                     /locus_tag="VIT19_09180"
     CDS             502..1098
                     /locus_tag="VIT19_09180"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEY5839196.1"
                     /translation="MRCANCGSFLDSDSRFCKNCGTVVRDPEETRIVRTAAPSAPQRH
                     AEDDDIENVVFTVRPTLLFVKIGYVAAIVGAIVLTILLAMVSFIDIPIYLSLPIALAL
                     LLIPAYYHIKRNMVRYTLTDSKVEIDYGFIARTTRNLPLSKIQDVTVSASIPQRILGF
                     GDVVIDNASEIGGSTILHNINNPRHYADLLLRELRRWH"
     gene            1188..1943
                     /locus_tag="VIT19_09185"
     CDS             1188..1943
                     /locus_tag="VIT19_09185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839197.1"
                     /translation="MGRFLFAAIFTVLVAAFAVGQPQPASPAPVTAEDETPILIKHLP
                     QWETVAKNAKYSVTLDDLKRNVANQPILDSVSFEGGTEAVAANYGQGQLVIVEFSTPH
                     FSVENDQRIAAKIQELKSQAQPVPTAYRRVGNYSVFVFNGSDEASANQLIDQVRYEKV
                     VQWLGEDPHLYEKLQRYFAEKSAGVLVTVLKGSGLSLLACLAMGGLFGFLLFRQRRAR
                     SAAFYSDAGGSVRLNLDELTKTSDPSRLLDSPK"
     gene            complement(1957..2118)
                     /locus_tag="VIT19_09190"
     CDS             complement(1957..2118)
                     /locus_tag="VIT19_09190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839198.1"
                     /translation="MGDDNGGGGSSVGVVAILVIFLIVVVAVVFAWRGGLFGGNKTQV
                     NVNVTTPSR"
     gene            complement(2161..2355)
                     /locus_tag="VIT19_09195"
     CDS             complement(2161..2355)
                     /locus_tag="VIT19_09195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839199.1"
                     /translation="MADDNGGGSGSTGVVAVLVIFLVVVILAVLAWRGGWFGGRKTQV
                     NVNVTVPQQQQQPAAPRSSP"
     gene            complement(2541..3575)
                     /locus_tag="VIT19_09200"
     CDS             complement(2541..3575)
                     /locus_tag="VIT19_09200"
                     /inference="COORDINATES: protein motif:HMM:NF019911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEGA domain-containing protein"
                     /protein_id="HEY5839200.1"
                     /translation="MTKKNFMVTPMFKFAITAMIALAFALVCTSSTAYAKKRVKHGTL
                     EFSTTPAGMPISIDGKPEGTTTSDVRVLQLEPGHHTVEITLPNGGRWVREFEIERSRR
                     LCLNLNFIPKKYTVATSPCPYPVIVSSPPTVNDGDLITFAADVSYGGNTPLNYTWTVS
                     PAEARVVSGVGTPTITVDSTGLGNQRVTAVLVVDDGSGEPACRQTAQAATNVTKIIPV
                     PECRMFDQFPSTAFDDTKARLDNLAIELQNNQDITAYVFVYAGRTSRVGQADALGRRA
                     MDYLVNERGVDSQRINMINGGYREEDYIEIWVCPPGAKAPQPSPTVQPGDAQPSGERT
                     RPRRPRRPRG"
     gene            complement(3578..4234)
                     /locus_tag="VIT19_09205"
     CDS             complement(3578..4234)
                     /locus_tag="VIT19_09205"
                     /inference="COORDINATES: protein motif:HMM:TIGR02595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HEY5839201.1"
                     /translation="MIGRIFRQLSTIASLLLLVAVPTEASPIKFADVVNVMGDLHRGH
                     QNEQLRLRVTQDPAAPLNVRSNVTTSNATGVSPATDENVVTASNELAATENSSTSASL
                     VAGTDIAPQQPQGDVQVFDQDQVAGTICDCGEIPAVGGGFPKWPFLLLIPLVCLTGIC
                     FDDDKKKIPPPTPEKTPPIPEPASLLLLGSGIAALSAGARRRYAKMKAAKDAAAMAEV
                     "
     gene            complement(4504..>6538)
                     /gene="pnp"
                     /locus_tag="VIT19_09210"
     CDS             complement(4504..>6538)
                     /gene="pnp"
                     /locus_tag="VIT19_09210"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR03591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEY5839202.1"
                     /translation="VIRYGDTMLLCAAVGALTPREGVDFFPLTVEYREAFFAAGRIPG
                     NYFRREGRPNEKEVITCRLIDRPCRPLFTEGYRNETQVVASVVSADPDNNPDVIAITG
                     ASCALYLSDIPFPTPIAGVRVGLIDGRYVVNPTYAEIRESKLNLIVAGTEEAIVMVEA
                     GAQEVSEAIMVEALMLAHKEINRLCRWQKELYKALGIEKRAVEPPVLNEEMVGEIERN
                     YAERLRTALDTTGQEKRSSYAAVDALKKEVVEGYPADEPEKRQMAKKVFDRLKEKIFR
                     DDILNQRRRPDGRRFSEIRAINCEVGWLPRTHGSALFTRGETQALVTTTLGTKEDEQY
                     MDDLEKGEIKRRFMLNYNFPPYSVGETGRFGSPGRREVGHGALARRALEAVLPDDTTF
                     PYTIRVVSDITESNGSSSMASVCGGALSMMDAGVPLKASVAGVAMGLVMEGNKYAILT
                     DIAGAEDHYGDMDFKVAGTHEGITALQMDIKITGVNAQIMAEALEQAKKGRLHILGLM
                     DQALPEGRASISEHAPRIIKIKINPDKIRDVIGPGGKVIRALVEETGAKIDVEDDGTV
                     SIATSDSAAAEAAVARIKGLTADAEVGATYVGTVSRIVDFGAFVEIFPGTDGLLHISE
                     IADRRIRDVRDELKEGQQIMVKCIGKEGNKIKLSRKAVLRDEGQQADAASGHE"
BASE COUNT         1369 a         1878 c         1851 g         1440 t
ORIGIN      
        1 cgcttcggcg taacgaatat cttcgatcca aagcaaaaca ttgacgccgg ttctcgctac
       61 atgaagtggc tgctgaatcg ttttcagggg aatttgtcgc tggcgctggc gggttataac
      121 gccggtgaag gcgcggtcga caagtatggt tggcggattc cgccgtatgc ggaaacccag
      181 gaatatgtgc gacgcatctc gcgccgctat aatttgctgc gcgacccgaa cgccgcgatc
      241 tacgcgccga ccgtgtcgcg ttcgcaagtg gcgagattaa actcgaaaga gccggcgccg
      301 ctgacgatgt atgaacgcag cgttttgact gtgcgtctgc ccgacggtcg cttgcagttg
      361 atgacgcagt agccgctttt aagaagtagt atctccctgg acgaggcgat gtcgaaccgg
      421 acgtcgcctc gtttcgtatt tggagaaaga gttcagttat gtatgattag ccctgcctaa
      481 cgatacaggg gccaaattaa gatgcgctgc gcaaactgtg gttcattcct cgattcggac
      541 agccggttct gcaagaactg cgggacggtc gtgcgcgatc ctgaagaaac gcggatcgta
      601 agaacggcgg ccccgtccgc gccgcaacgg catgccgaag atgacgatat cgaaaacgtg
      661 gtcttcaccg ttcggcctac tctgctattc gtaaagatcg gctacgtcgc cgcaatcgtg
      721 ggcgcgatag tgttaactat tctgctcgcg atggtcagct tcatcgatat cccaatctat
      781 ttatcgctgc caatcgcgct cgcactgctc ctgattccgg cttactacca catcaagcgc
      841 aacatggttc gttacacgct gactgactct aaggtagaaa tcgattacgg ttttatcgcg
      901 cgaacgacac gcaacttgcc gctttcgaag atccaggacg tcaccgtttc tgcgtcgatt
      961 ccgcagagaa ttctcggctt cggcgatgtc gtcatcgata acgcgagcga gattggcggc
     1021 tcaaccattc tgcacaacat caacaatcct cgtcactacg ccgacctgct tttgcgcgag
     1081 ctgcgccgct ggcattaaac tcacaccgga aggactcgca acttgttcac gatccgggaa
     1141 catcgcattg gtggcgggtt ctaaacggtc tggctgaggt aaatgaagtg ggtaggtttc
     1201 tgtttgcagc aatatttacg gtacttgtcg ccgcgtttgc ggtcgggcaa ccccagcctg
     1261 cctcgccggc acccgtgacg gctgaggatg agacgcccat cttaatcaag caccttccgc
     1321 agtgggagac cgtcgccaaa aatgccaaat acagcgtcac gctggatgat ctgaagcgga
     1381 acgtcgcgaa tcagcccatt ctggattcag tcagctttga aggtggcacg gaagcggttg
     1441 cggccaatta cgggcagggg caactcgtga tcgtggaatt cagcacgccg catttttcgg
     1501 tcgagaacga tcagcgaatc gcggcgaaga ttcaggagtt gaagagtcag gcgcaacccg
     1561 tgccgactgc gtaccggcgc gtcgggaatt actcagtctt cgtctttaac ggatcagacg
     1621 aagcttccgc caaccagctc atcgaccagg tccggtacga aaaggttgtg cagtggctgg
     1681 gagaggatcc gcatctctac gaaaagttgc aacgctattt cgccgagaaa tcagccgggg
     1741 ttttagtcac cgtgctgaaa ggttcaggtc tgtcgctcct ggcgtgtctg gcgatgggcg
     1801 gcctgttcgg atttcttcta ttccgtcaac gccgcgctcg aagcgcagct ttctattcag
     1861 acgccggtgg ctcagttcgc ctcaacctcg acgaactgac caagacaagc gatccttcgc
     1921 gcttgctcga cagccctaag taaatcaaga aaagtcttag cgactcggtg tagtaacgtt
     1981 gacgttgacc tgggtcttgt tgccgccgaa caatccaccg cgccaggcga aaacgactgc
     2041 aaccactaca atcaggaaaa ttacgaggat ggcaacaacg cccacgctgc taccgcctcc
     2101 gccattatca tcacccattt ttgaagtccc tccagaaatt aaagttgagt tgcccagaag
     2161 ttacggcgac gatcgcggcg ccgctggttg ttgctgctgc tgaggcacag tcacgttgac
     2221 gttgacctgc gtctttctgc cgccgaacca gccgccgcgc caggccagca ctgccagaat
     2281 caccacgacc aggaaaatca ccaacaccgc aactacacca gtgctgccgc ttcctccgcc
     2341 attatcgtca gccatagtta gcctccgtcc gggggaatca attaattgct aaggggtgga
     2401 aagggggaag gttactgcac tgagattctt agcacagggc tggaaatacc gtcaactacc
     2461 cgtcaaaaca aaagcaggtg acaacggagg gcgtcgtcac ctgctttcgg gaatggccca
     2521 cgttcaaggg cgctcagttg ttaacctcgt gggcggcgcg ggcgtcgggg ccgcgtccgt
     2581 tctccacttg gctgcgcgtc accgggctgg accgtcggcg aaggctgcgg tgctttcgct
     2641 cccggcgggc aaacccagat ttcaatgtag tcttcctcgc ggtagcctcc attgatcatg
     2701 ttgatgcgct gtgaatccac gccacgctcg ttgacgaggt agtccatcgc gcgccggccg
     2761 agtgcatcgg cctgacccac gcggctcgtg cggccggcat agacgaagac gtaagccgtg
     2821 atgtcctgat tgttttgcag ctcgattgcc agattgtcga ggcgagcttt cgtgtcatcg
     2881 aaagcagtcg acgggaactg atcgaacatg cggcattcag gcaccgggat tatctttgtc
     2941 acgttcgttg cggcctgggc cgtttgacgg caagccggtt cgcccgaccc atcatcaaca
     3001 accaggacag ccgtgacccg ttgattcccg agtccggtcg aatcaactgt gatcgtcggc
     3061 gtgccgacac cgctgactac gcgcgcttca gccggcgaaa cggtccaggt gtaattcaat
     3121 ggagtgtttc cgccgtaaga aacatcggcc gcgaatgtaa tcagatcgcc gtcgttaact
     3181 gtcggtggcg aagaaacgat taccggatag gggcaaggag acgtggcgac tgtgtatttc
     3241 ttcgggatga aattcaggtt gaggcaaaga cgtcgcgagc gttcaatttc gaattcccgc
     3301 acccagcgtc cgccattagg cagagtgatc tcgaccgtgt gatggccggg ctcgagttga
     3361 aggacgcgaa cgtcagacgt cgtcgtgcct tccggtttgc cgtcaatgct gattggcatg
     3421 ccggcgggcg ttgtcgaaaa ttcaagcgtg ccgtgcttca ctcgtttctt cgcataagcg
     3481 gttgacgagg tgcaaaccag ggcgaacgcc agcgcaatca ttgcggtgat tgcaaactta
     3541 aacatcgggg tgaccatgaa gtttttctta gtcatcgtta cacctccgcc atggccgctg
     3601 cgtctttcgc tgccttcatc ttggcgtagc gacggcgagc accagcgctc agggccgcga
     3661 ttccggaacc cagcaacaac aacgaagccg gctcaggaat gggcggagtc ttctccggcg
     3721 tcggcggcgg aatctttttc ttgtcgtcgt cgaagcagat acccgtcaga caaaccaagg
     3781 gaatcaacag caggaatggc cactttggaa agccgcctcc tactgccgga atctcgccac
     3841 agtcgcaaat ggtaccagcg acctgatcct ggtcaaagac ctgtacgtca ccttgcggct
     3901 gttgcggcgc gatgtcggta cccgcaacca gcgacgcgga cgtactggaa ttctcagtcg
     3961 ctgccagttc gttcgaagcc gtgacgacat tttcatccgt ggctggtgaa acgcccgttg
     4021 cgtttgacgt cgtgacgtta cttcggacgt tcaaaggggc ggctgggtct tgtgttaccc
     4081 gcaagcgcaa ctgttcgttc tgatggccgc ggtgcaggtc gcccatgaca tttacgacat
     4141 cggcgaattt gattggactc gcctcggtgg gcacggcgac caacaacaaa aggctggcga
     4201 ttgtgctcag ttggcggaaa atacgaccta tcatctggtt aggcaactcc ctcctgaagt
     4261 cttggctgcg ttttgtctct agcactcggg ttaagaattt cagtcatttt ttgagacaca
     4321 gcgaggcagc ctgctgcggg tacaagcctg caaaacccaa aggggcttgt tttccttcta
     4381 ggaaaagagg ctgaatgtga gggctattcc agtttcagga aggacttact gaggaaaaac
     4441 gccacaaaat aagagcgggt gaaaccgcga ttgcgcgaat cacccgctcc aggtgttgca
     4501 gtattactcg tgaccgctgg ccgcatcagc ttgctggcct tcgtcgcgaa ggacggcctt
     4561 gcgggaaagc ttaattttgt tgccttcctt gccgatgcac ttaaccatga tttgctggcc
     4621 ttctttaagc tcgtcacgca cgtcgcggat gcgccggtcg gcgatttcgg agatgtgcag
     4681 caggccatca gtgccgggga agatttcgac gaaggcgccg aaatcaacga tgcggctcac
     4741 cgttccgacg tacgtggcgc cgacttcggc atcagcggtc agacccttaa tccgagcgac
     4801 cgcggcttca gccgccgccg aatcagaagt tgcgatggaa acggtgccgt cgtcttcgac
     4861 gtcgatcttc gcgccggttt cctcaaccag tgcgcggatg actttaccgc ctggtccgat
     4921 gacgtcgcgg atcttgtctg gattaatctt gatcttgatg atccgcggcg catgttccga
     4981 aatggaggcg cgcccttcgg gtagcgcttg atccatcagg ccgaggatgt gcaggcggcc
     5041 tttctttgcc tgctccagcg cctcagccat gatctgagcg ttaacgccgg tgatcttgat
     5101 gtccatctgc aaggcagtga tgccctcatg agtgccggcg actttgaaat ccatatcacc
     5161 gtagtgatct tcggcgccgg cgatgtccgt cagaatcgcg tacttgttgc cctccatgac
     5221 caggcccatc gccacgcctg cgacggacgc tttcagcggc acgcccgcat ccatcatcga
     5281 gagcgctccg ccgcaaaccg acgccatcga cgaagaaccg ttcgactcag tgatgtctga
     5341 gacgactcga atcgtgtacg ggaaagtcgt gtcgtcgggg agcaccgcct cgagcgcgcg
     5401 acgcgcgagc gcgccgtggc cgacttcgcg gcgacccgga ctgccaaagc ggcccgtttc
     5461 gcctaccgag tagggcggaa agttatagtt cagcatgaag cgtcgcttga tctcgccctt
     5521 ttcgagatcg tccatgtact gttcgtcctc tttcgtaccc agcgtcgtgg tgaccagcgc
     5581 ctgggtctcg ccgcgcgtga acagcgccga accgtgcgtg cgggggagcc aaccgacttc
     5641 gcagttgatg gcccgaattt ctgagaagcg acggccgtcc ggacggcgac gttgattcaa
     5701 gatgtcgtcg cggaaaatct tttccttcag acgatcgaaa accttcttcg ccatctgccg
     5761 cttctcgggt tcatcggccg gataaccttc gactacttcc ttcttcagcg catcgacggc
     5821 ggcataactc gaacgcttct cctggccggt tgtgtcgagc gccgtgcgca gacgttccgc
     5881 gtaatttcgt tcgatctcgc cgaccatttc ttcgttcagg accggcggct cgaccgcgcg
     5941 cttttcgatg ccgagcgcct tgtatagctc tttctgccaa cggcacaggc gattaatttc
     6001 cttgtgtgcc aacattaacg cttcgaccat gatggcttcg gaaacttcct gagcgccggc
     6061 ttcgaccata acgatggctt cttccgttcc cgccacgatc aggttgagtt ttgattcgcg
     6121 aatctcggcg taagtcggat tcaccacgta ccgtccgtca atcaagccga cgcgcacgcc
     6181 ggcaatcgga gtgggaaacg gaatgtccga aaggtaaagc gcgcaggacg cgccggtaat
     6241 cgcgatcaca tccgggttgt tgtccggatc ggcggaaacg accgacgcca ccacctgggt
     6301 ttcattccga taaccttcgg taaatagcgg ccggcaaggc cgatcgatca acctgcaggt
     6361 aatgacttct ttttcattgg gccggccttc gcgccgaaaa tagttgccgg gaatgcggcc
     6421 cgcggcaaag aacgcttcgc gatactcaac ggtgagcggg aagaaatcca ccccctcacg
     6481 cggcgtcaaa gcaccgacgg cggcgcacaa caacatcgtg tctccataac ggatcaca
//
LOCUS       DATDBY010000496         3486 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_977029, whole genome shotgun sequence.
ACCESSION   DATDBY010000496 DATDBY010000000
VERSION     DATDBY010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3486
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_977029"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="VIT19_09215"
     CDS             <1..412
                     /locus_tag="VIT19_09215"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY5839203.1"
                     /translation="ERAQAIMQGNRDRLRPILMTTLALVAGMLPLALGTGPGAEERRS
                     IAVVVIGGQTLSLLLTLIATPVAYSLLDDLGSTARWKRWVRGARTLTEPIRARIPSFR
                     RAPATEAQSTDHAPERERIHTTDGLKTRPVGGGK"
     gene            705..1091
                     /locus_tag="VIT19_09220"
     CDS             705..1091
                     /locus_tag="VIT19_09220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839204.1"
                     /translation="MSSKSPRNGVGLCLALFLLFAAVLACSRGSNKCTATLTYQGKTY
                     TGIGKKDDAVSFACNKYCIADDSEYDAMYRIWLDSPEGRAKGLPSKDKAIYESKRLLD
                     FVTITCANRCVGWTKSGRAQAETKCE"
     gene            complement(1122..1634)
                     /locus_tag="VIT19_09225"
     CDS             complement(1122..1634)
                     /locus_tag="VIT19_09225"
                     /inference="COORDINATES: protein motif:HMM:NF025268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEY5839205.1"
                     /translation="MSPKIIHVVLALAAVGALAAVAPQPAAAQSSYTPVKKYDPKRDA
                     ARDIDDAVAEAKRTNRRILLVVGGEWCSWCHILENYFAAQPDLKARRDKAFVTVKINF
                     SDENPNEAVLSRYPPSEGYPHIFVLDSDGKFLHSQGTAVLESGKSYNLEKMNNFLTQW
                     APPVKPATAP"
     gene            complement(1762..3312)
                     /locus_tag="VIT19_09230"
     CDS             complement(1762..3312)
                     /locus_tag="VIT19_09230"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY5839206.1"
                     /translation="MNRTEMFRLVQHRLVAVLVGALIVTSASFAPLMAQQRRKPTPAA
                     SNTVLQPNRSPLITFRILFMTGSAFDPEGKEGLAALTAAMLAEAGSRQMSYEQIQDAF
                     YPMASDFDWQIDKEMTAFTGTTHRDNLDKYYSIISQMLLDPGFRQEDFTRLKTDAINF
                     LKVSLREANDEELGKEQLYNMIYAGHAYGHHNIGRLTALDRLTLDDVRAFYRQNFTRA
                     NLVLGLAGGYPRTFVGKVRADFNKLPAGKPSTAKFGAPKVAPGMRIEIIKRETISTAI
                     SLGFPISVTRSHKDWPALALVASYLGQHRSSSSYLYQRLRELRGLNYGDYAYIEYFPR
                     GMFQFQPDPNLGRQQQIFQIWIRPVEPQNGHFTLRAALYEYDKLMRNGMTPDDFESTR
                     QFLSKFVNILTATQDAQLGYALDSRYYKIKDFPAYMREQLAKLTLADVNRALRAHLKS
                     DAMRVAIITKDAEGLSQAIVTNKPSPITYNAPKPKEITDEDKLIERYQIVVKPADVTI
                     VPVDKVFQ"
BASE COUNT          762 a          964 c          991 g          769 t
ORIGIN      
        1 ggaacgtgcg caggccatca tgcagggcaa tcgtgatcgt ctacgaccga ttctgatgac
       61 gacgcttgcg ctggtcgcgg gcatgttgcc gttggcgctc gggaccgggc ctggggctga
      121 agaacgccga tcgatcgcgg tagtggtcat cggcggacaa accctgtcgt tgctgctgac
      181 gctgatcgcc acgccggtcg cttattcact gctggatgac cttggatcga cagcgcgctg
      241 gaagcgttgg gtgcgcggcg ctcgtacgtt gaccgagccg atccgcgcgc gcatcccgag
      301 cttccggcgt gcccctgcca ccgaagcgca gtctactgac cacgcgcccg aacgcgagcg
      361 cattcatacg actgatggcc tcaagacgcg gcccgtaggc ggggggaaat aacgcgtagg
      421 tcaccagccg tcgcgccatt cggggcttgg tagtcgttaa ccttaagacc aaaccaaaag
      481 caccatccag gtagtcagca ctcgacggtg aggcaagcct caccgcactg cggcgcggaa
      541 gagccgtcgc gccccctcgg cgcttggtag ccgttaaacc ttaagaccaa accacaagca
      601 gcatccaggt agtcagggat tctaatccgc attgacaaga cttgccgttg caaatatttt
      661 taccaccgcc aaacagaaca gtctcaactg aaaaggagag cgtcatgtcc tccaaatccc
      721 cccggaacgg tgtcggcttg tgcctcgcac tgttccttct attcgctgcc gtactcgctt
      781 gcagtcgcgg ctcaaacaaa tgcacggcga ccctgactta tcagggcaag acttacaccg
      841 gcatcggcaa aaaggacgac gccgtcagct tcgcctgcaa caagtactgt atcgctgatg
      901 attcggaata tgacgcgatg tatcgcatct ggctcgattc accggaaggc cgagccaagg
      961 gtttgccgtc gaaggataaa gcaatctacg agagcaagcg tttgctggat ttcgtaacga
     1021 tcacttgcgc gaaccggtgt gtgggctgga ccaagagtgg ccgggctcaa gcagaaacga
     1081 agtgtgagta gttaaggagt tcgccgaaag aactgaagcc gctacggtgc ggtcgcgggc
     1141 ttgaccggtg gcgcccactg cgtcagaaag ttgttcatct tttccaggtt gtaagacttt
     1201 ccactttcga ggacagcggt accctgcgaa tggaggaact tgccgtcgga atcgagcacg
     1261 aaaatgtggg gatagccttc cgacggcgga taccgtgaaa ggacagcctc gttaggattc
     1321 tcgtcgctga aattaatctt caccgtcaca aaggccttat cccgacgagc cttcagatcg
     1381 ggttgcgccg caaagtagtt ctccaggatg tgacaccaac tgcaccactc gccacccacg
     1441 accagcagga tgcgccggtt ggtacgtttg gcttccgcga ccgcgtcgtc aatgtcacgc
     1501 gcggcgtcgc gcttcggatc gtactttttg accggggtgt aagacgattg cgccgcagcc
     1561 ggctgtggcg cgacggctgc tagagcgcca accgctgcga gcgccagaac gacatgaatt
     1621 atttttgggc tcatcaaaaa ccggttctcc gtactttgta ctttgtgctt tgtactttga
     1681 tctctagtgg acatggcgca ttcgtttcaa acggcgaaca aagcaccaag tacaaagctc
     1741 aaagtacaaa cgagacacta ctcactgaaa caccttgtcc accggcacaa tcgtcacgtc
     1801 cgcgggcttg accacaatct ggtagcgctc gatcagcttg tcttcgtccg tgatctcttt
     1861 cggcttcggc gcgttgtagg taatcggcga aggcttgttt gtaacgattg cctggcttaa
     1921 gccttccgcg tccttggtga taatcgcgac gcgcattgcg tcagatttca aatgcgctct
     1981 aagcgcgcgg ttgacgtcag ccagcgtcag cttcgccagc tgctcgcgca tatacgccgg
     2041 aaagtcctta atcttgtagt agcgactgtc cagcgcgtag ccgagctgcg cgtcctgcgt
     2101 ggcggtcagg atgttcacga atttcgacag gaactgtcgc gtcgattcga aatcgtccgg
     2161 ggtcattcca ttccgcatca gcttgtcata ttcgtaaagt gcggcacgca aagtgaagtg
     2221 accattctgc ggctcgaccg ggcgaatcca gatttggaaa atttgctgct ggcggcccag
     2281 gttcggatcg ggctggaact gaaacatgcc gcgcggaaaa tattctatgt aagcgtagtc
     2341 gccgtaattc aatccccgca attcacgcaa acgctgatag agatacgagc tgctcgaacg
     2401 atgctgaccc aggtatgaag cgacgagtgc cagcgccggc cagtctttgt gactgcgagt
     2461 caccgagatc ggaaagccca gcgagatggc cgtcgaaata gtctcgcgct taatgatctc
     2521 aatgcgcatc cccggcgcga ctttcggggc tccaaacttc gcagtgcttg gcttgcccgc
     2581 cggcagtttg ttgaaatccg cgcgcacttt gccgacaaag gttcgcggat aaccgcccgc
     2641 cagacccaaa accagattcg cgcgcgtgaa gttctggcga taaaaggcgc gcacgtcatc
     2701 aagcgtcaat cgatcgagtg ccgttagtct gccaatgttg tgatgaccat aggcgtggcc
     2761 ggcgtaaatc atgttgtaga gctgttcctt gccaagctct tcatcgttgg cttcgcgtag
     2821 agagaccttc aggaagttga tcgcgtcggt ctttaagcgc gtgaaatctt cctgtcgaaa
     2881 acctggatcg agcaacatct ggctgatgat tgaatagtat ttatccaaat tgtcgcggtg
     2941 cgtcgtcccg gtaaaggccg tcatctcttt gtcgatctgc caatcgaagt cgctggccat
     3001 cggatagaac gcgtcctgga tctgttcgta agacatctgc cgcgagccgg cttccgcaag
     3061 catcgcggcg gtcaaagccg cgagtccttc tttaccttcc gggtcgaaag ccgaaccggt
     3121 cataaaaagg atgcggaagg tgattagcgg cgagcgattg ggttgaagaa cagtgtttga
     3181 tgccgccgga gttggttttc gtctttgttg agccatcaga ggtgcgaatg aagccgaagt
     3241 gacaatcaga gcgccaacca gaactgcgac caggcgatgt tggaccaggc ggaacatttc
     3301 ggtgcgattc attatctgcc cgcctccttt ttcttgtcag tcgccaaggt cacgatggtg
     3361 cgatttcggt caacgaaata ttttgcggca gtactgcgga catcttgcgg cgtaatctgc
     3421 gtgtaaacat cgaacaattt gttcagcgtc tcgggcgtgc gcttgagcgc gatgtagggc
     3481 gccaaa
//
LOCUS       DATDBY010000497         6447 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2904371, whole genome shotgun sequence.
ACCESSION   DATDBY010000497 DATDBY010000000
VERSION     DATDBY010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6447
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2904371"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            288..977
                     /locus_tag="VIT19_09235"
     CDS             288..977
                     /locus_tag="VIT19_09235"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HEY5839207.1"
                     /translation="MRFVIVISTGGSVINQLLDNDFFKSRIHSVVSDRECAAIPKAAA
                     HGTRTAIIPEPDKAKFSALVLEYLKQHTIDYAISFYSKLFVGEILNEYQDRIINLHPS
                     LLPAFKGLHGFDDAIDYGVCYVGSTIHLIDENMDEGKIIQQTVCRVDQTRPIAFTRHR
                     IFEQQCRSLLQVMKWIEDGRLRVNDGRVKVEGATFMGGEFSPDLDFSEAIELEVPAPN
                     WLTLNDGVKVG"
     gene            978..1937
                     /locus_tag="VIT19_09240"
     CDS             978..1937
                     /locus_tag="VIT19_09240"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY5839208.1"
                     /translation="MKISVAIAAYNAAEYLREAIESVVAQTLPPYEIVVVDDGSADHT
                     AQVCRSFGERVRYFYRENDGTAGIGARWQSLNESKGDWIALLDHDDRWLPAKLERQCE
                     AVKTFPETGVVFTKYRNIDDHGKPLDPTSAPAATGEMRQYNSHDALHHLLRSNPYCPS
                     SALILRRALVDDGPPSNTSCGDWSDWLRITRRYSMTVVDEYLTEYRVTAEQFCANKDL
                     LARRMRETLMAQRPHLFARCPECRLAFREGRAHVAQVFSVAARAYLDQYHEAVRSADT
                     ANARRLMGQVIRTAPFEVLRPRRLAAASRNYVRAILKKGGNGN"
     gene            complement(1958..2725)
                     /locus_tag="VIT19_09245"
     CDS             complement(1958..2725)
                     /locus_tag="VIT19_09245"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY5839209.1"
                     /translation="MSTLASLSTSARYRIRALGRRVGTPALSSFSEGVREALSNVANE
                     LRISRIVKKSQRQFRQWQGQHNLKLNLGCGGDLKPGWINVDLSLDSADPRPEGSEAIF
                     INYDLRREIPLDSGSCEIIYSSHFFEHLDYKVGLRQLRECYRLLKPNGTFRISLPDFK
                     GACRAYLNNDADYFKLVDTDVFLPEVEPGTLTLIDYVNFAAYQSGEHKRMYDEEKVVL
                     LLQQIGFSAVKVAAYENTIDPPAPLRIDYSFYVQATK"
     gene            complement(2743..4029)
                     /locus_tag="VIT19_09250"
     CDS             complement(2743..4029)
                     /locus_tag="VIT19_09250"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5839210.1"
                     /translation="MRPIIKVENLSKQYRIGARDSAYTTLREALVAKARAPFSRRNGH
                     SEQTIWALRDVSFEVEPGEVVGIIGRNGAGKSTLLKILSRITEPTEGFIDLYGRVGSL
                     LEVGTGFHPELTGRENIFLNGSILGMSHHEIQSRFDEIVAFAEVEQFLETPVKRYSSG
                     MYVRLAFAVAAHLQPEILVVDEVLAVGDAQFQRKCLGKMGQVAREGRTVLFVSHNMTA
                     IQSLCRRAVWLDGGRVCADADAGQVVADYLQRSFSALGQQNWDEIESAPGNDKVRIRS
                     ARVRVEGGAPDGRITVHTPLNLEFEYWNLVPDTCLNLSLVLHNEEGVLVLNTGPVKEP
                     VWHGRPFPAGLFRSVCRIPGDLLNDSPYRVTLYVIKDQSTAVFVYPDILMFEVVDTAE
                     RAGWYGKWPGVVRPDFVWTTEQAATSQLSQHLSNGR"
     gene            complement(4040..4996)
                     /locus_tag="VIT19_09255"
     CDS             complement(4040..4996)
                     /locus_tag="VIT19_09255"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5839211.1"
                     /translation="MQVSKLSSNVETSFENRIAQSTDQSTHTIKTTSDNQASNSFADT
                     LPEQPLVKIAPGKSGALRVKDLWAYRELLYFLTWRDVKVRYKQTSLGSAWAILQPLLT
                     MLIFTLLFGKLAGIQSGDIPYPLFSFAGLVIWTFFANAITNSGNSLVSSANLITKVYF
                     PRLIIPAAAVIAGLVDLAIALVVLVPLMIYYRVSVGFGLVMIPLLVVICALLALGIGM
                     WLSALNVKYRDIRYAIPFLIQLWMFASPVIYPASLLPEKWRWILLLNPLTGIIVNFRI
                     ALFGGQSFEWKSLGVSAVVTIFILFYSAYSFRRMERHFADIV"
     gene            complement(5684..6034)
                     /locus_tag="VIT19_09260"
     CDS             complement(5684..6034)
                     /locus_tag="VIT19_09260"
                     /inference="COORDINATES: protein motif:HMM:NF022140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2489 domain-containing protein"
                     /protein_id="HEY5839212.1"
                     /translation="MTKNENYIRGKIVAICEATLAEEMGIIAASRRLSALGLELFDGR
                     HADFVTFDAIDSETDHLPVDTERKNWSSEALERKDREIAEAEAFYKNDVFAACRQLIE
                     RFAIRDGFTVQRVD"
BASE COUNT         1557 a         1759 c         1674 g         1457 t
ORIGIN      
        1 gaagtaagta ggctcgccgc ggaccaccag gaaccgattg cgatttatcc atccgtactg
       61 gatgtaattc aggttgtcgt aaatgatgaa ccggtcaacg gctgaaacca actggtagaa
      121 gccaagatac gggaaaaagt acggctgatt cattccgagc ttcatctatg gttggcaggc
      181 ggagacaacg gtcatgcgca ggtgaattga ggttactcta atcagaacgc gcgggtttcg
      241 caagttggga cagcgccgtg ttgtggctat acttcgatcg cacacatatg agatttgtaa
      301 tcgtgatttc gaccggcggc tcggtgataa accagctgct cgataatgac tttttcaagt
      361 cccgcattca ttccgtagtg tcggatcgcg aatgcgcggc gatcccgaaa gcagcggcgc
      421 acggaaccag aaccgcaata atcccggaac cagacaaagc aaagttctca gcgctggtgc
      481 ttgagtattt gaaacaacac acaatcgatt atgcgatctc gttctacagt aagctgttcg
      541 tgggtgaaat ccttaacgag tatcaggatc gaattatcaa tctgcaccca tctttgctgc
      601 cggcgttcaa gggactgcat ggatttgacg acgctattga ctatggtgtg tgttacgtgg
      661 gcagcaccat tcatctaatc gacgagaata tggacgaggg caaaatcatc caacagacag
      721 tgtgccgcgt cgatcagacc agacccatcg cgtttacccg acaccggatt tttgagcaac
      781 agtgccgttc gctcttacag gttatgaaat ggatcgagga tggccgtttg agggttaatg
      841 acggccgggt taaggtcgag ggcgctactt ttatgggcgg cgaattctct ccggatctgg
      901 atttttctga agcgatcgag ttagaggtgc cggcgcccaa ttggctgact ctgaatgacg
      961 gcgtaaaggt tggttaaatg aaaatcagtg tcgccattgc ggcttacaat gcggctgagt
     1021 atctgcgcga agcaatcgag agcgtggtgg ctcagacctt gccgccgtac gagatcgtgg
     1081 tggtggatga tggctcggct gaccacactg cgcaagtctg ccgttcattc ggcgagcgcg
     1141 tgcgatactt ttatcgcgag aacgacggca ccgccggcat cggcgccaga tggcagtcac
     1201 tcaacgagtc aaaaggcgat tggattgctt tgttggatca cgacgatcgc tggctgccgg
     1261 cgaaactcga acggcaatgc gaagcggtga aaacttttcc cgagaccgga gttgttttta
     1321 cgaagtatcg caacatcgat gaccacggca aaccactgga cccaaccagt gcgccggccg
     1381 ctaccggcga aatgcgacaa tacaattcac acgatgcgtt gcaccatttg ttacgttcca
     1441 atccatactg tccgtcgtcg gccttaatcc tgcgccgcgc cctcgtcgac gatggtccac
     1501 ccagcaatac ttcgtgtgga gactggtcgg actggttgcg aataactcgc aggtactcga
     1561 tgacagtggt tgatgaatac ctcaccgagt accgcgttac cgcggaacag ttttgcgcca
     1621 ataaggattt gttggcgcgg cgaatgcgcg aaacgctaat ggcgcaaaga ccccatcttt
     1681 ttgcgcgatg tcctgagtgt cggctggctt ttcgcgaagg ccgggcccat gtggcccagg
     1741 tattctcggt tgcggcccgc gcttatcttg atcaatatca cgaggccgtt cgatcggcgg
     1801 atactgcgaa cgcccggcgg ctcatgggtc aagtgattag aacggcgccg ttcgaggtat
     1861 tgcgcccccg ccgtttggcc gcggcttcgc ggaattatgt cagggcgatt ctaaaaaagg
     1921 gtggcaatgg aaattgattc gtgcccggcc gccacaatca ttttgttgcc tgcacgtaaa
     1981 aagaatagtc gattcgcagc ggtgccggcg gatctatcgt attttcgtat gcagctacct
     2041 tgaccgcgct aaatccgatc tgctgtagca acaagactac tttttcttcg tcgtacatgc
     2101 gtttgtgctc gccggactga taggcagcaa aattaacgta atcaatcagg gtcagagttc
     2161 ccggctcgac ttccgggaga aacacgtcgg tgtcgaccaa cttgaaataa tcagcgtcat
     2221 tgttgagata ggcccggcaa gcgcctttaa aatccggcag cgaaattcgg aaggtcccgt
     2281 tgggtttgag cagccggtaa cattcgcgca actggcggag cccgactttg tagtccaggt
     2341 gctcaaaaaa gtgagacgaa taaattatct cgcacgagcc agagtcgagc gggatttcac
     2401 gacgcaaatc gtaattaata aaaatggcct cagacccttc aggcctggga tccgccgaat
     2461 ccagcgagag atctacattg atccagcccg gtttcaggtc gccaccacaa ccgaggttca
     2521 acttgaggtt gtgttggcct tgccactgcc ggaattggcg ctgagatttt ttaacgatcc
     2581 gcgaaatcct gagttcattc gcgacatttg aaagcgcctc gcgcacccct tcggaaaacg
     2641 agctcaatgc cggtgtcccc actctccggc ccagtgcgcg aattcgatat cgcgcacttg
     2701 tgcttagact tgccagcgta ctcatctcac ttttcggttc gattatcggc cgttacttag
     2761 gtgttgtgat agttgcgagg tcgccgcctg ctcagtcgtc cacacaaaat cgggacgaac
     2821 cacgcccggc catttcccat accacccggc gcgttcagcc gtgtcgacca cctcgaacat
     2881 aagaatatcc gggtaaacaa acaccgccgt actctggtcc ttgatcacat agagcgttac
     2941 ccggtaggga gagtcattca aaagatcccc gggaatacgg cagacgctgc gaaacagacc
     3001 ggccgggaac ggccggccat gccagaccgg ctctttgacc ggcccggtgt tcagcaccag
     3061 cacgccttct tcgttgtgca gaaccaggct taggttcaaa caagtgtccg gcaccaggtt
     3121 ccagtactca aactcgaggt tgagcggtgt gtgaactgta attcgaccat caggcgcgcc
     3181 cccttccact cgcacgcgcg cgctgcgtat ccgcaccttg tcgttgcccg gagcgctttc
     3241 aatttcatcc cagttctgtt gccccaacgc cgagaaagaa cgctggagat aatcggctac
     3301 tacctgaccc gcatctgcat ccgcacaaac tcgtccgcca tccagccaaa ccgcccggcg
     3361 gcaaagactc tgaatcgccg tcatattatg actcacaaaa agcaccgtgc gaccctcgcg
     3421 cgcaacctgc cccattttgc cgagacattt cctttgaaat tgcgcatcac cgaccgccag
     3481 cacctcgtca accaccagta tctccggctg caaatgagcc gccaccgcga aggccagtcg
     3541 cacgtacatc ccgctgctgt agcgtttgac cggcgtctcg agaaactgct cgacttcggc
     3601 gaacgcaaca atctcatcga accggctttg gatttcgtgg tggctcatcc ccagaatcga
     3661 cccattcaga aagatgttct cgcgcccggt cagctccgga tggaaaccag tgcccacttc
     3721 caatagactg ccgacccgtc cgtagagatc gataaaacct tcggtgggct cggtaatgcg
     3781 cgaaagaatt ttgagcagcg tcgacttgcc ggcgccgttg cggccgataa tcccgacaac
     3841 ttcaccgggt tcaacttcaa aggaaacatc gcgaagcgcc cagatggtct gttcggaatg
     3901 gccgttgcga cggctgaatg gcgcgcgggc tttcgcaacc agagcttcgc gcagcgtggt
     3961 ataggccgaa tcgcgcgcgc cgatgcggta ttgcttactc agattctcga ctttgatgat
     4021 tggtcgcaat tgaaaacccc tagacgatat cggcaaaatg tctttccatg cgccggaacg
     4081 aatacgcaga ataaaacaga atgaagatcg tcaccaccgc cgaaactccg agcgatttcc
     4141 attcaaaact ctgaccgccg aacagggcaa tccgaaaatt aacgataata ccggtaagcg
     4201 gattcaataa caggatccag cgccacttct ctggcaataa gctcgcggga taaataaccg
     4261 gcgacgcaaa catccaaagc tgaatcaaaa aagggatggc gtaacgaatg tcgcgatatt
     4321 ttacgttcag cgctgacagc cacatgccga tgcccagcgc cagtaatgcg caaatgacca
     4381 ccagcaaggg aatcattacc aaaccgaagc cgacgctcac gcggtaatag atcatgagcg
     4441 gaaccagcac taccagtgca atcgccagat ccacgagacc cgcaattacc gcagccgcag
     4501 gaataatcaa tcgcggaaaa taaaccttgg tgatcaggtt cgcgctacta accaggctgt
     4561 tgccactgtt ggtgatcgca ttcgcaaaga aagtccagat aactaacccg gcgaaagaaa
     4621 acaacggata gggaatgtcg cctgactgaa ttccagccag cttcccaaac agcagcgtga
     4681 agatcagcat ggtcagcagc ggctgaagaa ttgcccacgc ggatccgagg ctggtttgtt
     4741 tgtaccgaac tttaacgtcg cgccacgtca ggaaataaag aagttcccgg taagcccaca
     4801 aatctttgac gcgaagcgca cctgacttgc ccggcgcgat tttaaccagc ggctgttcgg
     4861 gcaaggtgtc ggcaaagctg tttgaagcct gattgtctga ggtggttttg atggtatggg
     4921 tgctctggtc ggtactctgg gcgatccggt tttcaaaaga tgtttcgacg ttcgaactta
     4981 gcttcgatac ttgcacagga agaaaccgga gtgcctcagt ctagctacac ccgtgataag
     5041 gcgtcaagta tgttatccga cggcaaggct gctgtgaaat gctgtctgtg ctctttgacc
     5101 aaatcgcaat atcgcaggcc tgcggatctg aaaaagctct aaccaacaaa ataaaaggag
     5161 gccaggttgt ttctattgtc accccaactc aagctcacca aaccacccga gtaggtgtgg
     5221 cagataccag tacgcttgac ttgcggatca actcatagat gaccctagtt ttagttttcc
     5281 cttttctgaa ctagctcgga tttccaagga aaaggccgga aagtgggtta gcgagtcgta
     5341 atcaacaggt cgaaagaaag ctcggcagtc gctgttttca aatttagatc ggaggaactt
     5401 ctggtggtcc tcgggagctt cgaagattgt gcgccggcta ttgctgcaag tgatgacgca
     5461 gcaaaggccg actcgcagtt tcacgccatc tccgaaaatg gcgtcttagc tcttggccct
     5521 tacctcttag cgcataggaa tcgaaggcct gacccggttc ttagtttttt cgccgccgct
     5581 gcatcacttg cggctcttat ttccacgctc aaactgacgg tgtgaataaa gttctcgatc
     5641 agagtcagag aggtaaagat cctcgccgtc gtcgaagcct tcatcaatca acacgctgaa
     5701 cggtgaagcc gtcgcggatc gcaaagcgct cgattagttg tctgcacgct gcgaatacgt
     5761 cgttcttgta gaaagcctcc gcctcagcga tctctctatc ttttcgttcg agggcttctg
     5821 aactccaatt cttgcgctca gtgtcaacgg gaaggtgatc cgtttctgaa tcgatggcat
     5881 cgaacgtcac aaagtctgca tggcgaccat cgaacaattc caatcctaat gcgctaagcc
     5941 gtcgggacgc tgcaatgatt cccatctctt cagctaatgt tgcttcacag atggcgacga
     6001 tcttgccccg aatgtagttc tcgttcttcg tcattggagc ttagtcttca actccacaac
     6061 tttgcccgta ctcacattct ggtaggcgtg aatctggaat ccgtccttgg ctttgtaagc
     6121 ccaactgcga accttcgccc actgcgaagc gctaccacca tactcggcaa ccaggcgtgg
     6181 tgcatctcgc aaaaacaaca ttggtgccag cgccagcaaa agcttggcct tgaccggcca
     6241 ttacctgagc atgagcagct tgcgattcgc tggcaagctg cttgtttaat agagtaagtc
     6301 ccgagaagcg catcagaagg ggtcaggcct gcaattctgc aattctcaaa gtgcggcttt
     6361 cccagtaaag tttttcgatg tcatcggcga acttccgatt ctctgccgcc tctagtttag
     6421 cgcgcgcaga atcatgacgc cggctca
//
LOCUS       DATDBY010000498         2091 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_653613, whole genome shotgun sequence.
ACCESSION   DATDBY010000498 DATDBY010000000
VERSION     DATDBY010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_653613"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VIT19_09265"
     CDS             complement(<1..320)
                     /locus_tag="VIT19_09265"
                     /inference="COORDINATES: protein motif:HMM:NF016142.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HEY5839213.1"
                     /translation="MTRNDFLTISSVVESAVAANQPVVALESTVIAHGLPRPQNLETA
                     VRLEEIVRAEDSTPATVAVIEGMLCVGLDSEQRELIANESDIKKLSTRDLPIAVARRW
                     NGATT"
     gene            complement(531..>2091)
                     /locus_tag="VIT19_09270"
     CDS             complement(531..>2091)
                     /locus_tag="VIT19_09270"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5839214.1"
                     /translation="ATAGVFFWDGKEARTETALENLKGDAVWSALADSDGLWLASARG
                     LYFFKSGELRELAPGVHARALFPSADNSRAGQVWCATVGNGLLRVSLDDQFGAVVSRF
                     DIEQGLPSQRVFGVVSTRGQNGSEQVIAATNRGVVRYQPSRGTPTVLPSRVIGQRIHQ
                     QSELAAGLHLDYPQNSLLLDVTAISSRTFPEQFQYAFALYDNTGKIIRQKLSHDSQFP
                     MEQLSAGKYKVIARAFTKDLTPAVPLSFEFTVARAPFPWTSTALGVLLLLALIALVWG
                     YAQNRRIHRTSAELAGANRELADARLRLANETEAERRRIARDLHDQTLADLRHLALLV
                     DQIPLNATTARPNRAPSAPNALRAEIESISHEVRRICEDLSPSALENVGLSAALQFAL
                     AHAVEQAAPECKFEYDFVCDDASEEKLQLSQSTQIQIYRIAQEALSNICRHANAKRVK
                     MSAGIAAGNQFELQIEDDGRGYDEADTRKNSGRGVANIRTRASMIHADASWAKRNGGG
                     TVFSLRKNEAS"
BASE COUNT          419 a          642 c          584 g          446 t
ORIGIN      
        1 gtcgttgctc cgttccaccg gcgcgccacg gcgatcggca gatcgcgcgt gctgagcttc
       61 ttgatgtcac tttcgttggc gatcagttcg cgttgctcgc tgtctaatcc gacgcacagc
      121 attccttcaa ttaccgcaac ggttgccgga gtcgaatctt ccgcacgcac aatctcttcc
      181 agacgaaccg cggtctccag attctgcggc cgcggcaaac cgtgcgcgat gactgtggat
      241 tccagcgcga cgacgggctg gttggcggcg acggcggatt caactacgga gctgatggtg
      301 aggaaatcat tacgtgtcat ttcggtatga gcggaatcac gaatgccttc gctccgtcag
      361 gagcgagatg tttatagcac agtgatggcg agtgaaatca aaagctcctt taggagcgaa
      421 atgcgattcg agatcgttat ttcgctccta acggagctaa cacttcttgc actaacccgc
      481 gttctataaa cattcggctc cgacggagcc taaaagatgt cattcgcgcc tcacgaagct
      541 tcattcttgc gcagcgagaa caccgtcccg ccgccgttgc gctttgccca ggatgcgtcg
      601 gcgtgaatca tgctggcgcg cgtgcgaatg ttggcgacac cccggcccga attcttgcgc
      661 gtgtcggctt catcatagcc gcgtccgtca tcttcaattt gcaactcgaa ctgattgccg
      721 gccgcgatgc ccgcgctcat cttcacgcgc tttgcgttgg cgtggcgaca gatgttgctc
      781 aacgcttcct gcgcaattcg atagatctga atctgcgtgc tctgcgacaa ctgaagtttt
      841 tcctcactcg cgtcgtcaca gacaaagtca tattcaaact tacattcagg cgccgcttgc
      901 tcaactgcgt gcgcgagtgc gaactgcaac gccgcagaca gcccgacatt ttcgagcgcc
      961 gatggactca ggtcttcgca tatgcgcctt acctcgtgtg aaatcgattc gatctcggcg
     1021 cgcaaagcat tgggagctga gggcgctcga ttcgggcgcg ccgtcgttgc gttcaacggt
     1081 atctgatcga caagcaaggc aagatgccgc aaatccgcca gcgtctgatc gtgcaggtcg
     1141 cgcgcgatgc gccgccgctc agcttccgtt tcgttcgcga gtcgcaggcg cgcgtcagcc
     1201 agctctcgat tggctcccgc gagttccgca ctcgtccgat gaatgcgccg gttctgcgcg
     1261 taaccccaca ccagcgcaat cagcgccaac agcaggagaa ctccgagcgc cgtcgaggtc
     1321 catgggaatg gcgcgcgggc aacggtaaat tcaaacgaca gcggaacggc cggcgtcaga
     1381 tctttcgtaa atgcgcgcgc gatgactttg tatttgcccg cgctcaactg ctccatcgga
     1441 aactgcgaat cgtgcgaaag cttctggcga ataatctttc ccgtgttgtc gtacagagcg
     1501 aacgcgtact gaaactgctc gggaaaggtt cggctgctga tcgcagtgac atcgagcagc
     1561 aaactgttct gcggataatc gagatgcaac ccggccgcga gttcgctctg ctgatgaatc
     1621 ctttgaccaa tgaccctcga aggcagaacg gttggcgtgc cgcgactcgg ttgatagcgc
     1681 actacgccgc gattcgtcgc tgcgatcacc tgttcgctgc cattttggcc gcgcgtactg
     1741 accacgccga acacacgctg cgacggcagg ccctgctcga tgtcgaaacg cgaaacgacg
     1801 gcgccgaatt gatcatccag cgagacgcgc aggagtccgt tgccaactgt cgcgcaccag
     1861 acttgtccgg cgcgggaatt gtcggcactc ggaaaaagag cgcgggcgtg cactccggga
     1921 gcaagctcgc gcagctctcc tgatttgaag aaataaagcc cacgcgcgct cgccagccac
     1981 agcccatcac tgtccgccag cgccgaccaa actgcgtcgc ctttcaggtt ttccagcgct
     2041 gtttcggtac gcgcttcttt gccgtcccag aaaaacactc ccgccgtggc c
//
LOCUS       DATDBY010000499         3128 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2989001, whole genome shotgun sequence.
ACCESSION   DATDBY010000499 DATDBY010000000
VERSION     DATDBY010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2989001"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..411)
                     /locus_tag="VIT19_09275"
     CDS             complement(<1..411)
                     /locus_tag="VIT19_09275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839215.1"
                     /translation="MSVGIAIRVTSLRSVAAQTTQPSPSIPVRPNEGAVIGRPDAASS
                     PAPRADLQCQGCHAPGKQLPYLAGSLFHNQPHEDYDKGFHAKSLQTGSKAASCVDCHA
                     RNRDLSTMLPASDPRSTINRANIAETCGRCHADKS"
     gene            complement(646..963)
                     /locus_tag="VIT19_09280"
     CDS             complement(646..963)
                     /locus_tag="VIT19_09280"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY5839216.1"
                     /translation="MMSRLIKLMFLAAAVIVAAAFLIIATPARATDDETATLYNTKCK
                     MCHGAAAEKKFDATKADDVLIQTTLDGKAAEKPPNMPAYKDKGMTPEQAKALVTHMKS
                     LKQ"
     gene            complement(1259..1837)
                     /locus_tag="VIT19_09285"
     CDS             complement(1259..1837)
                     /locus_tag="VIT19_09285"
                     /inference="COORDINATES: protein motif:HMM:NF014176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEY5839217.1"
                     /translation="MKLITIFALLLFSLALVSTQSLPHEASAQDAKKMPETMVLSKEA
                     KLGGVSFNHLKHATEKRSPDGTQMIACVECHHTAQPAAEALKHPPHKTVWPADRTTTL
                     TAELIEKDATTAVNVCTDCHARAEAKPKLLPEIPSVKFEGAAEATVLNNQQAFHRNCG
                     GCHDEVVKARPALDPAPPTSKKCTACHKKTAA"
     gene            complement(1943..2833)
                     /locus_tag="VIT19_09290"
     CDS             complement(1943..2833)
                     /locus_tag="VIT19_09290"
                     /inference="COORDINATES: protein motif:HMM:NF025875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEY5839218.1"
                     /translation="MLLRSFRQNLGGRFYKHLAPPAMLIAIAIVFAATMTGSRASEPA
                     GAVETFESPQQQMQFPEGLDYSKFLHNTQNHARLPCLLCHRRESNAPVPRRPGASQHL
                     PCAGCHAQQFTSSDSPICTICHTDVKSGALKGFPRLRSFRVKFDHARHTRMGNISCTN
                     CHRPSRGGVAMSIPTGFNAHTTCYRCHTPRAQSGGRDISSCGTCHQLGRYARTPQFTQ
                     AFRVGFSHAKHDKMTCNECHQVRAGMPQRRQVTNPAPLNHHATGGGQSCMTCHDGKRA
                     FGGDDFSACKRCHTRPTWHF"
BASE COUNT          615 a          881 c          929 g          703 t
ORIGIN      
        1 cgacttgtcc gcgtggcaac gcccgcatgt ttcggcgatg ttggcgcgat tgatcgttga
       61 gcgcggatcg ctcgccggca gcatggtgga caggtcgcgg ttacgagcat gacagtcgac
      121 acaactcgcc gccttgctgc ctgtttgcag agatttggcg tggaaaccct tgtcgtaatc
      181 ctcgtgcggc tggttatgaa aaagcgatcc ggcgagatag ggaagttgtt tgcccggcgc
      241 gtgacagccc tggcattgaa gatcagctcg tggagcagga gacgacgcag catccggccg
      301 gccgatgacc gctccttcat ttggtctgac tggaattgat ggggatggtt gagtggtttg
      361 tgcggccacc gaacgcagac tggtgacccg aatcgcaatg ccaactgaca ctgcggctac
      421 gacgacagca gctatgaggc agcgtttcac agacttaaac caggctgcac attatagcgg
      481 catgggggct gttcgcggag accaaaatca cattcgaaca atgcgctcag aaagaaatct
      541 gcgacccgcc cgacttctcg gaaggggtcg cagccaaggc tcggtcgctg gccgcgactg
      601 accgcggacg agcgagcgac taggggggcg gattttgccc gagggctact gcttcagtga
      661 cttcatatgg gtgaccagcg cctttgcctg ctcaggagtc atgcctttgt ccttgtacgc
      721 cggcatattg ggcggcttct cggccgcctt gccatcgaga gtagtctgaa tcagcacgtc
      781 atcagctttc gtcgcgtcga atttcttctc agccgctgcg ccgtggcaca tcttgcactt
      841 tgtgttgtag agcgttgccg tctcgtcgtc cgttgcgcgc gcgggcgtcg caatgattag
      901 gaacgccgcg gccacaatca ctgccgccgc caggaacatc aacttaatta accgactcat
      961 catgattgcc tccaataaac ctgtatccgc gcctttcggc tgcacggtcg gtttcgcaat
     1021 gcctgtgccg gggggatttg cttggttttt gccgcaggcc gggcgaatag ctgcgaagtt
     1081 ttgcgctgag atagcgggaa actcccacag taattcgttc catctctctc agggaggggt
     1141 ttgggtgagg gccttagcgc acgaagtttc tccgattaca cttagagaaa atcaggtaga
     1201 acctcagcca ggaccgtcat ccgcaaccct tctcccaaag gaaaacggcg taagacagtt
     1261 aagctgcggt ctttttgtga caagccgtgc acttcttcga agtcggcggc gccggatcga
     1321 gcgctggcct ggccttaacc acttcgtcgt gacagccgcc gcagttgcga tggaacgcct
     1381 gctgattatt cagcaccgtc gcttccgccg cgccctcaaa tttcactgac ggaatttccg
     1441 gcagcagctt cggcttcgcc tcggcgcgcg cgtgacagtc ggtgcagacg ttgaccgcag
     1501 tggtggcgtc tttctcgatc aactcagcgg tcagcgtcgt cgtgcgatca gccggccaaa
     1561 ctgtcttatg cggcggatgc ttcaaagcct cggcggcggg ctgcgcggtg tgatgacact
     1621 cgacacacgc aatcatctgc gtgccgtccg ggctgcgctt ttcggtggcg tgcttaagat
     1681 gattaaaact gaccccgccc agcttcgcct cttttgaaag aaccatagtc tccggcatct
     1741 tcttggcgtc ttgcgccgaa gcttcatgcg gaagtgattg agttgaaacg agcgcgagtg
     1801 agaacagaag caatgcaaag atggttatga gtttcatgat gagcctccgt ttggagtgcg
     1861 gtggcttgac gccgctttcc tattccacat tgagtgtaca ccctgacctt acaaaaacgc
     1921 cgtcaagccg gcgcattcca aatcagaaat gccaggtcgg gcgggtgtgg caccgcttac
     1981 aagctgaaaa gtcatcgccg ccgaaagcgc gtttgccgtc gtggcatgtc atgcaacttt
     2041 ggccgccacc cgtggcgtgg tggttgagcg gcgcggggtt cgttacctgc ctgcgctgcg
     2101 gcatgccggc gcgcacttga tgacattcgt tacaagtcat cttgtcgtgc tttgcatggc
     2161 tgaagccgac gcgaaatgcc tgtgtgaatt gcggcgtgcg cgcgtagcgg cccaactgat
     2221 gacacgtgcc gcatgaagaa atatcccggc cgcccgattg cgcgcgcggc gtgtgacatc
     2281 gatagcaggt cgtgtgagcg ttgaagccgg tcggaataga catcgccacg ccgccgcgcg
     2341 acggccgatg acagttggtg caactgatgt tgcccatgcg cgtgtgccgc gcgtgatcga
     2401 acttcacacg gaagctgcgc agacgtggaa agcctttcag cgcgcctgat ttcacgtccg
     2461 tgtgacaaat ggtgcaaatg ggactgtccg aactcgtaaa ctgctgcgcg tgacagccag
     2521 cgcaaggtag atgttgcgaa gccccaggcc gccgcggcac cggcgcgttc gattcgcgtc
     2581 ggtgacagag cagacaaggc aggcgcgcgt ggttttgcgt gttgtgcagg aacttcgaat
     2641 agtcgagccc ctcaggaaat tgcatctgtt gctgcggtga ttcaaaggtt tccacagcgc
     2701 cggccggttc cgacgctcgt gacccggtca tcgtcgcggc aaaaacgatc gcgatagcga
     2761 tgagcatcgc cggaggcgcg agatgtttat agaaccgtcc gcccaaattc tgtcgaaagc
     2821 tccgtaggag cacgatgtgt cgacgacacc ggaacattcc gctcctgcgg cgctttggat
     2881 tctctttact ttcgggttct ataaacattc ggctcttacg gagctaatca aacgcttgcg
     2941 tgtcgcaagc ccattcatca acttttcggc ttcggtgtcg gaatcgcctg cggatgactg
     3001 acaggcatcg cttctttccc aaacgtcacg tgacatttcg tgcagacgaa cttcgaatct
     3061 ttttgcttac tggcgatttc gtaattcaac gcgccgccgt catcagccgt ctgggtgata
     3121 tgacagcc
//
LOCUS       DATDBY010000500         3718 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2294035, whole genome shotgun sequence.
ACCESSION   DATDBY010000500 DATDBY010000000
VERSION     DATDBY010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3718
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2294035"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2555
                     /locus_tag="VIT19_09295"
     CDS             <1..2555
                     /locus_tag="VIT19_09295"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5839219.1"
                     /translation="MEYVDGYTLRQLIHDRQTDLAKLLRWLQHVAVGLAKAHSAGIVH
                     RDLKPDNIMVTREGHAKILDFGLAKLIEPQSLSGQRTSDGSSEVATALMQQHSTPGAV
                     LGTVGYMSPEQAQGKINEIDHRSDVFSFGCILYEVITGRKAFAGKDTIDSLNKIIREQ
                     PEAIATLAPNAPVDLQRIVRRCLAKDPEERYQTIKDVALEIKDVRRELQNAVGINTTV
                     PPSSSSMAHSVASPSSLESQAAVTSLSPAATSAHPSSAEYIASQIGRHKKGILIGIGL
                     GVVAIGLIVGLYHFWWSGERHKPSSGQMKISRLVTGIKGVSNASISPDGKYVAYAVYQ
                     RETVSLHLRQVSTGSDREIVAPVANANINGTVFSPDSELVYYNFHHREDSPLGTLYQV
                     PVIGGREPRKILEHISSIIGFAPDGKRFALFRDHQKTGESEVLIGNLDGGEPQTIAKR
                     KGNDFYLGIPAWSPDGTRIVCPVGTDTGGTKFSLVEIPAGGGSEKPLTSFNWYGDIAR
                     PMWLKDGSGLVVNARERTVSTPQIWRVSYPGGEVSRVTNDLAEYGSSSFGLTADSSTI
                     MTLVTERSSRIWLAAPGATGTTQLTDGKADGENGIAWTPDGHIVYVAKTGDNLDIWIM
                     NGDGTGKRQVTTNAAAEEHIDVSPDGRYIVYTSAQAGGNDEVWRVNLDGTNAIPLARG
                     DYFHHRPRVSPDGKWVVFGSFKTGTPLLWKVSIDGGEPTKVTDLAFQALGFLPDGTRM
                     YGEYFDDQISPPRWRGAIVSFDSGQLVKAFDPPQGANRAVIPDEQTIIYNAKKSDVDN
                     LWSRPIDGGEPKQLTRFTSETIYNFARSRDGKQFAIARGTSSSDIILIKDFQ"
     gene            2784..>3718
                     /locus_tag="VIT19_09300"
     CDS             2784..>3718
                     /locus_tag="VIT19_09300"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family peptidase"
                     /protein_id="HEY5839220.1"
                     /translation="MKKLALFIVAALVSSILFFSSPASSQGWKEKVRKSAKKIENNYV
                     VVLDDSVIGERGEYSIADYMAEDMARNYRGKLKHVYKHAINGFSVEMSEEDAEKMAQD
                     YRVLFVEEDGIFTTDATQTNPPWGLDRIDQRNRPLSATYTYNWTGSGVRVYVIDTGIR
                     TAHSQFGGRASNVFDVNGGNGQDCNGHGTHVAGTVGGSTYGVAKSALLRGVRVFACGS
                     TTSTSNIIAGVNYVTANRILPAVANMSVGGPASSSMDTAVNNLINSGVTVAVAAGNSN
                     GANACNYSPARVANAITVGSTTSTDARSSFSNIGT"
BASE COUNT          860 a         1042 c         1069 g          747 t
ORIGIN      
        1 cgatggaata cgttgacggg tacacgctgc gtcaactgat tcacgaccgg cagacggact
       61 tagcaaagct gctgcgctgg ctgcaacacg ttgcggtagg tttagccaag gcccactcag
      121 ccggcatcgt gcatcgcgat ctgaagccgg acaacatcat ggtcacgcgc gaaggtcatg
      181 cgaagatcct ggactttggc cttgcgaaat tgatcgagcc gcagagcctt tcgggccagc
      241 gcacgagtga cggatcaagc gaagtcgcga cggcgctgat gcagcaacac tcaacgccgg
      301 gcgcggtgct ggggaccgtc ggctacatgt cgccggaaca ggcgcaggga aaaattaacg
      361 agatcgatca ccgctcggac gtcttttcat tcggttgcat tctctatgaa gtaattacgg
      421 ggcgaaaagc tttcgcaggc aaagatacga ttgattcgct caataagatc attcgcgaac
      481 aaccggaggc gatcgccacg ctcgcgccga atgctcccgt cgacttgcag agaatcgtcc
      541 gccgttgtct ggcaaaggat ccggaagagc gttatcaaac gatcaaagac gtcgcgcttg
      601 aaatcaaaga cgtgcggcgt gagttacaga atgccgtggg catcaatacc actgtgccgc
      661 catcgagttc atcgatggct cactccgtcg ctagtccttc gtcacttgag agtcaggcgg
      721 cggtgaccag tctgtcgccg gcggccactt ccgcgcatcc atcgagcgcc gaatacatcg
      781 cgtcgcagat cggccgtcac aagaaaggga ttctcattgg gatcgggctt ggagttgttg
      841 cgatcggact aattgttggg ctctatcatt tttggtggtc tggcgagcga cataaaccat
      901 catcaggcca gatgaagatc tcgcggctcg taacaggaat taagggcgtc agtaacgcat
      961 caatttcacc cgacggaaag tacgtcgcct atgcggttta tcagagagag acggtcagcc
     1021 tgcatctgcg ccaggtttcg accggcagcg atcgtgaaat cgtcgcgcca gtcgccaatg
     1081 ccaacatcaa cggcactgtc ttctctccgg atagcgaact tgtttactac aacttccacc
     1141 atcgcgagga tagtccgctg ggtactctgt atcaggttcc ggtaatcggc ggaagagagc
     1201 cgcgcaagat tctcgaacac attagttcga tcatcggctt tgcgcctgac ggtaagcggt
     1261 tcgcgctttt ccgtgaccac caaaagactg gcgaatctga agttctaatt ggaaacctgg
     1321 acggcggcga gccacaaaca atcgcgaagc gaaaaggcaa tgacttttac ctcggcatac
     1381 cagcctggtc gccggacggg acccgaatag tatgtccggt cggcaccgat accggcggga
     1441 caaaattcag tttggtcgaa atccccgccg gcggcggaag cgaaaaaccg ctcacgtcat
     1501 tcaattggta cggtgatatt gcccggccga tgtggttgaa ggacggaagt ggcctggtag
     1561 ttaatgcccg ggagcggact gtcagtacac ctcaaatatg gcgcgtgtct taccctggcg
     1621 gtgaagttag cagagtcact aacgatctgg cggagtatgg atcatcaagc tttgggctga
     1681 ccgctgattc ttccaccatc atgactctgg tgacagagcg atcatcgcgg atttggttag
     1741 cggcgccggg cgcaaccggg accacgcaac tgacggatgg caaggccgac ggtgagaacg
     1801 gcatcgcctg gactccggac ggccacattg tttacgtcgc gaagacgggt gacaacctgg
     1861 acatctggat tatgaacggt gacggcacag gcaaacggca ggtgaccacc aacgcggcag
     1921 ctgaagaaca tatcgatgtg tcaccagacg gccgatatat cgtctacacc tcggcccagg
     1981 ctggcggcaa cgatgaagtc tggcgggtga acttagacgg caccaatgcc attccgctcg
     2041 cgcgcggcga ctactttcat caccggccga gagtctctcc ggatgggaaa tgggtggtct
     2101 tcggttcgtt caagacaggg accccgctgc tttggaaagt ttccattgac ggtggcgagc
     2161 cgacaaaggt cactgacctg gccttccaag ccctgggatt tttgcctgac gggacgagaa
     2221 tgtacggaga gtattttgac gaccaaatca gtccgccgcg gtggcggggc gcaattgtgt
     2281 cgttcgattc cggtcaactt gttaaggctt tcgatccgcc ccagggcgcg aatcgggcgg
     2341 taatacccga tgagcagacc ataatctaca acgcgaagaa gtcagacgtt gataacctct
     2401 ggagccggcc aattgacggc ggtgagccga agcaactcac acgatttact tccgaaacaa
     2461 tctacaactt cgcgcgttcg cgcgacggaa aacagttcgc tatcgcccgg ggaacctcgt
     2521 cgtcagacat tattctgatc aaagatttcc agtagttccc acgcaaacag aaacgcaaac
     2581 aaatttttct tgcgcggtcg cgaaattcta cctatactgc ccgcgcccat tcccccaaag
     2641 ccttaccaag ttggcctagc gaagcatgtt gtttcgtccg gcaaatcttt tgcagcattc
     2701 gcgggagcgg ctgtcgtgtg tcccaagcgc tcacttcgcc agctctcatc ggaaccaaac
     2761 gtccgcagga taggagcacc taaatgaaga aattagcttt gttcatcgtc gcagcactgg
     2821 tcagctcaat tttgtttttc tcatcgccgg ctagcagcca gggttggaaa gagaaagttc
     2881 gtaagagcgc aaagaagatc gagaataact acgtcgtggt tttggacgac tcggtgatcg
     2941 gcgagcgagg cgagtactca atcgccgact atatggctga agacatggcc cgaaactacc
     3001 gtgggaaact gaagcatgtt tacaagcacg ccatcaatgg cttttcggtg gagatgtccg
     3061 aagaagatgc cgaaaagatg gctcaggact atcgcgtctt gtttgtagaa gaggatggca
     3121 ttttcacgac tgacgctacg caaacgaatc cgccgtgggg cctcgaccgc attgaccaac
     3181 gcaatcggcc gctgagcgcc acctacactt acaactggac tggatcaggc gttcgcgttt
     3241 acgtcatcga cacgggcatt cgcactgccc attcgcaatt cggcggacgc gcctcgaacg
     3301 tgtttgacgt gaacggcggc aacgggcagg actgcaacgg ccacgggacg cacgtcgccg
     3361 gcacggtcgg gggcagcact tacggcgtgg ccaagagcgc gcttctgcgc ggcgtccggg
     3421 tcttcgcctg cggtagcaca acgtcgacct cgaacatcat cgcgggcgtc aactatgtga
     3481 cggccaaccg catcctgccg gcagtcgcca acatgagcgt cggcggcccg gcctcgtcct
     3541 cgatggacac ggcggtcaac aacctcatca actcgggcgt gacggtggcc gtcgccgccg
     3601 gcaacagcaa cggcgcgaac gcttgcaact attcgcccgc gcgcgtcgcc aacgccatca
     3661 cagtgggctc gacgacgtcg acggacgcgc gctcctcgtt ctcgaacatc ggcacgtg
//
LOCUS       DATDBY010000501         4532 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_21889, whole genome shotgun sequence.
ACCESSION   DATDBY010000501 DATDBY010000000
VERSION     DATDBY010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4532
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21889"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1003
                     /locus_tag="VIT19_09305"
     CDS             <1..1003
                     /locus_tag="VIT19_09305"
                     /inference="COORDINATES: protein motif:HMM:NF019040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HEY5839221.1"
                     /translation="AAINLDGFFGLHPSMQSFKSLWDSKRLAIVHASGSPDNTRSHFD
                     AQDYMESATPGVKSTRDGWLNRYLQSKTGSKSLFRGVAMTQQMPRAMQGRAPAIAMSN
                     LAEFRIRAGQTSASMQGGFEEIYDQAVNDTLHGTGKETFEAINYLKQVNPAQYKPENG
                     ANYPANGFGNALRQTAQLIKAGVGLEVAFTEAGGWDTHVNQGNQQGQLSNLLRNFSSA
                     IAALHTDLGQRMDDVVILSMSEFGRTVRENGNRGTDHGHANAMFILGNSVRGGKVYGD
                     WPGLKSSQLYEGRDLALTTDFRDVFGEIAAKHLGASNLKAVFPGYDAGSSKFRGFLG"
     gene            complement(1011..1409)
                     /locus_tag="VIT19_09310"
     CDS             complement(1011..1409)
                     /locus_tag="VIT19_09310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839222.1"
                     /translation="MTRQSARSVDSVNLNVGASNTAATNTTTTAAANTTTTGGSRLAE
                     AVENKKASLREEIRSDPDNPKPHASLAQLLFIQGQYSESEKEAREAIRLDPDFSQPHY
                     TLAFLLKKQNKTAESEAERKRADELAAKGQ"
     gene            complement(1784..2254)
                     /locus_tag="VIT19_09315"
     CDS             complement(1784..2254)
                     /locus_tag="VIT19_09315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839223.1"
                     /translation="MKRITTISLVLLITCFACTKKSANQPTTAGNPASGTMTTSDSKT
                     ANASTGTRDLSGTWIANEGPRVWELVITRVDANTFETTPTLISNSEKDGLIDYGPPGS
                     RGDAMVIITDGPGTFRVRWAKAENFHKAEFWEGTGTYDDNSFNFAGVYTGKRKG"
     gene            complement(2585..3391)
                     /locus_tag="VIT19_09320"
     CDS             complement(2585..3391)
                     /locus_tag="VIT19_09320"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY5839224.1"
                     /translation="MKRVCSLIFVCCLLAGCTQTKTEPVQKIDLAGAKIIDLSHPFDA
                     QTIYWPTEDGFKFEKGFDGTTPQGFYYAANKFSGPEHGGTHIDAPRHFAVSSHTLDQI
                     PVEQLIGNAIVIDVREQSESNRDYQVTVADFTAWESQHGPIPNGAIVLLRTGFAKHWP
                     DRVKYMGTDERGAGAVAKLHFPGLHPDAARWLTLNKSIKAIGLDTPSIDYGQSTLFES
                     HQVLFAKNIPAFENVGDMSALPAKDFLVIALPMKIGGGSGGPLRIVAVVK"
     gene            3682..>4532
                     /locus_tag="VIT19_09325"
     CDS             3682..>4532
                     /locus_tag="VIT19_09325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839225.1"
                     /translation="MFECRHRTSIAMSVFAFLIWASLVFSPVTAQQPQPPTYDPKLIS
                     EIKAIQKAALESDYAYRQLAHLSNNIGARLSGSPQAQKAVEYTAAELRKLGLEVKLEK
                     VMVPHWVRGEETGALVEYPHMAPGTTQKVVLTALGGSVATPANGLTAEVVVVNNFDEL
                     TALGRRRVEGKIVLFNAKFDQRLADNGLSGPAYGQSVIYRGAGASAAARLGAVAALNR
                     SSGGADYRLPHTGGMRYANDAPKIPAASVTAEDADMMADLAAQGRVRMRLLLTPRTLP
                     DAVSYNVV"
BASE COUNT          935 a         1231 c         1330 g         1036 t
ORIGIN      
        1 agcggccatc aacctggacg gtttctttgg gctgcatccg tcgatgcagt cgttcaagtc
       61 tttgtgggat tcaaagcggc tcgcgatcgt tcacgcgtcg ggctcgcccg acaacacgcg
      121 ttcgcatttc gatgcgcagg actacatgga gtccgctaca ccgggggtga aatcaacgcg
      181 cgatggctgg ctgaatcgct acctgcaaag taagaccggc tcgaagtctc tgttccgcgg
      241 ggtcgcgatg acgcagcaga tgccccgcgc gatgcagggg cgcgcgcccg cgatcgcgat
      301 gtcgaatctc gccgagtttc ggattcgcgc gggccagacg tcggcttcga tgcaaggcgg
      361 ctttgaagag atttacgatc aagccgtcaa cgacactttg cacggcacag gcaaagagac
      421 attcgaagca atcaattatt tgaaacaggt gaatcccgcg cagtacaaac cggagaatgg
      481 cgcgaattac ccggcgaacg gtttcggcaa cgcactgcgg cagactgcac aattgatcaa
      541 ggccggcgtc ggattagaag tcgccttcac ggaggccggc ggctgggaca cgcacgtgaa
      601 ccagggcaat cagcagggac agttgagtaa cttgttgcgg aatttcagct cggcgattgc
      661 ggcgctgcac accgaccttg gtcagcgaat ggatgacgtc gtgattcttt cgatgtctga
      721 gtttggccgc actgtccgcg agaacggcaa ccgcggcacc gatcacggtc acgcaaacgc
      781 tatgttcatt cttggtaact cggtacgcgg cgggaaagtg tatggcgact ggcccggcct
      841 gaaatcaagc cagttatacg aaggccgcga cctggcgctg acgacggatt ttcgagacgt
      901 gtttggtgaa atcgctgcca agcatctggg cgcttcgaat ttgaaagccg tgtttcccgg
      961 atacgatgcg ggttcttcga agtttcgtgg gtttcttggc taaaaggaag ctattgacct
     1021 tttgcggcta gctcgtccgc tcttttccgt tcagcttctg actccgctgt cttgttttgc
     1081 tttttcagca ggaaggccag ggtatagtgt ggttgggaaa aatcggggtc gagccgaatc
     1141 gcctcgcgcg cttccttttc agactcagaa tattggccct gaatgaagag aagttgggcc
     1201 aagctcgcat gtggcttggg attatctgga tcggagcgga tttcctccct caggctggcc
     1261 tttttgttct ccaccgcctc ggccagcctg ctacctcctg ttgtcgtcgt gttagcggcg
     1321 gcagtagtcg tcgtgttagt cgcggcagta tttgaggcgc ccacgttaag gttaaccgaa
     1381 tcgaccgatc gggcgctctg tctggtcata attaagatcg ccacgacaac tgcaactaca
     1441 aaaacggcag caaccccaag tacaacataa gcgcgagaat tcgatttggg tgcgtggggc
     1501 gtttctcgag tctctcgagc gtgaagcgct ggagggggag cctgaatcgt cgtgagcggt
     1561 aacgacggag ctgtaggtcg caagtggtgt tgtcctgtgt ccactgttcc aggcgcttgg
     1621 ctcatcacct cagtcggtgg tgggttcaca tcgcgtgtcg gctttgcggc gggatcgtaa
     1681 ggcgcggaca gaaccgatcc gtccatcaga cagaatgcaa gcgtgtcgtc aggataagtt
     1741 cgattgcagg tggggcaact tttcattcct tcaagtgcgg acgttaacct tttcgcttac
     1801 cggtgtaaac gcctgcgaaa ttgaaactgt tgtcgtcgta ggttccggtg ccttcccaaa
     1861 actctgcctt gtgaaagttc tcggccttgg cccaacgcac gcggaatgtt ccgggaccgt
     1921 ccgtgattat gaccatcgca tcgcccctgc tgcccggcgg gccataatcg atcagaccat
     1981 ccttttccga gttgctaatt agcgtcggcg tggtctcaaa cgtgttcgcg tcgaccctgg
     2041 taatgaccaa ctcccacacc cgcgggcctt cgttggcgat ccaagtgccg ctcaagtctc
     2101 ttgtcccggt agaggcgttc gcagttttcg agtcgctggt ggtcatcgtg ccgcttgcag
     2161 gattcccggc agtggttggc tgattcgcag actttttcgt acaggcgaag caggtgatta
     2221 gcagtacaag actgatggtt gtgattctct tcatctgtgg tctttctcgg tgatgtgttg
     2281 tcgagaacgc ggagggtttt ttaccacaaa gacactaaga cacaaagggc ctaaagaacg
     2341 agagttgagg ctaacgccag gctcctagcg ttaatggctc ggccacgccg atgcgcggca
     2401 agtctctgac ttgccgcccg ccctttgccc ggattttcgg gtctcagacc cgaaccacat
     2461 ttcaaaagcc ttcccggtaa gtcggagact tacctcgcat cagtgtggca gagccatttt
     2521 ccagagagag aggcgatact cagagctatg ttgcccagcc ttaaactgat taatccgcgg
     2581 ctaattactt tacgacagcc acaattctta gcggcccgcc gctgccgccg ccaatcttca
     2641 ttggcagtgc aatcacgaga aagtctttgg cgggcagcgc gctcatgtcg ccgacgtttt
     2701 cgaacgccgg gatgttctta gcgaagagaa cctggtgact ctcgaacaga gttgattggc
     2761 cgtagtcgat gctgggcgtg tcgagaccaa tggctttgat cgatttgttc agcgtcagcc
     2821 agcgcgccgc gtccggatgc aggccgggga agtgaagctt cgcaactgcg ccggcgcccc
     2881 gctcatctgt gcccatgtac ttcacgcgat cgggccagtg ctttgcgaag ccggttcgca
     2941 acaggacgat cgcgccattc ggaatcggtc cgtgctgcga ttcccacgct gtaaagtcgg
     3001 ctacggtaac ctggtaatcc cgattcgatt cgctctgttc gcgaacgtca atgacgatcg
     3061 cattgccgat tagctgctca accggaattt gatcgagggt atgcgaactg acggcgaaat
     3121 gtctcggcgc gtcgatgtgc gtaccgccat gttcgggccc ggagaacttg ttggctgcgt
     3181 agtagaaacc ctgcggcgtg gttccatcga agcccttctc gaacttgaag ccgtcttccg
     3241 ttggccagta gattgtttgc gcatcgaacg gatgggacag atcgataatc tttgcgccgg
     3301 cgagatcaat cttctgaacc ggctccgttt tggtctgagt acaaccagcg agcagacaac
     3361 agacgaagat gagtgagcaa actcttttca tttgtgaacc tcggtgtatg tcgttcgaac
     3421 ctattgcgga gcagattatt cacgcgaacg ctttaacgtg caaagcgcgc tggttgatgg
     3481 tattgccgac ttctcacctc cgtgtctctg tgaggtctcg gtgtctccgt ggtgaataat
     3541 ctcgcacgcg ataactcacc acagagacac aaagctccac aaagacacag aggaaaaacg
     3601 attagcgaat gccgggacga ctggcgcggt taaccgcgtt cgtttatgct gcgaagcacc
     3661 ctaattgtcg aggtcgtaac catgtttgaa tgtcgtcatc gaacgtcaat cgcaatgtct
     3721 gtcttcgcat ttctcatttg ggcttcgctg gttttttcgc ccgtcacagc gcagcagccg
     3781 caaccgccaa cttacgatcc aaaactgatc tctgaaatca aagcgattca gaaagcggcg
     3841 ctcgagagcg attacgcgta ccgtcagctg gcgcatctgt ccaacaacat cggcgcgcgg
     3901 ctcagtggct cgccgcaagc gcaaaaggcg gtcgagtaca cagcggcgga gcttcgcaaa
     3961 ctgggtctcg aagtgaaact cgaaaaggtg atggtgccgc actgggtgcg cggcgaagag
     4021 accggcgcgc ttgtcgaata tccgcacatg gcgcccggaa ccacacaaaa agttgtgctg
     4081 acggcgctcg gtggcagcgt cgcgactccg gcgaacggac tgactgctga agttgtggtt
     4141 gtgaacaact ttgacgagtt gacggcgctt ggccgccggc gtgtcgaagg aaaaatcgtt
     4201 ctgttcaatg cgaagttcga tcagcgtttg gcggacaacg gcctttcggg tccagcgtac
     4261 ggtcaatcgg tgatttatcg cggagccggc gcgagtgcag cagcccgtct cggcgcggtt
     4321 gcagccctta accgttcgtc cggaggcgct gactaccggc tgccgcacac gggtggaatg
     4381 cgctacgcga acgatgctcc aaagattccg gccgcgtcag ttaccgcaga agatgcggac
     4441 atgatggctg acctggccgc gcaaggccgc gtgcgaatgc gtttgctgct gacgccccgg
     4501 actttgcccg acgcggtcag ttacaacgtc gt
//
LOCUS       DATDBY010000502         5100 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2467439, whole genome shotgun sequence.
ACCESSION   DATDBY010000502 DATDBY010000000
VERSION     DATDBY010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5100
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2467439"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..503)
                     /locus_tag="VIT19_09330"
     CDS             complement(<1..503)
                     /locus_tag="VIT19_09330"
                     /inference="COORDINATES: protein motif:HMM:NF016032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HEY5839226.1"
                     /translation="MFDQFTLGIEEEFQIVDPVSRELRSHVTEFLDEGKMILGEQIKP
                     EMIQSMIEVGTGICKNIQEARADISNLRGVIASLAEKNGLRIVAASTHPISRWQDQKI
                     FDDERYELLVQELQTVARSLLIFGLHVHVGIPDRERQIHIMNASRYFLPHILALTTSS
                     PFWMGHNT"
     gene            complement(546..1079)
                     /locus_tag="VIT19_09335"
     CDS             complement(546..1079)
                     /locus_tag="VIT19_09335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839227.1"
                     /translation="MAVVIDEQPLAWAEISEEKRQRYREKLSGLYGHEGDEAAYDALT
                     RDKQEALDLLSGRLIGTDLWRHIGRIVNVYGRGGVGMYFSAVSDLETDLQGRRQFTRT
                     FARHRDNTGGFLEKGRPHASLHFLYIDPLEGEREWHVHLDLYGGWGSILTMIQHLFYE
                     RFRKFRPDWRIMKQWMK"
     gene            complement(1083..1415)
                     /locus_tag="VIT19_09340"
     CDS             complement(1083..1415)
                     /locus_tag="VIT19_09340"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEY5839228.1"
                     /translation="MAETEDPEEISTDDRRRFDRSRLIVDVHFDGAESTGVAGTKDIS
                     LGGLYMTTQTRIPVGAMLALRIPIGSDHVIVTGEVVYSNPGEGVGVKFHELTDDTRRA
                     LELGLRPA"
     gene            1563..2738
                     /locus_tag="VIT19_09345"
     CDS             1563..2738
                     /locus_tag="VIT19_09345"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: protein motif:HMM:NF005871.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HEY5839229.1"
                     /translation="MSSRNSAFRASTMGFATTAIHAGNEPDSATGAVSVPIYQTSTYA
                     QDGLGKNKGFEYARTANPTRLALERNIAALEGAQFGYAFASGMAAIDATLRLIKANEH
                     VIVSDNTYGGTFRLFSKILANYCIEFDFVDTSDVTNVEAAIKDNTRMVFIETPTNPVM
                     MVTDLKAVSDVAHAAGARVVCDNTFMSPYLQRPLEFGVDIVVHSTTKFLNGHSDGIGG
                     AVVLNNEDDAAWIQFVQNSAGAILSPFDSWLVLRGTKTLALRMEQHDKSGRAVAAFLE
                     DHPKVQKIYYPGSLSHKQHDLAKRQQKGFGSMVSFDVGSLAAARTVLESAKLCTLAES
                     LGGVETLICHPATMTHASITAESRDRLGITDGLVRISVGIEDTDDIIADLDQALASV"
     gene            2871..3803
                     /locus_tag="VIT19_09350"
     CDS             2871..3803
                     /locus_tag="VIT19_09350"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEY5839230.1"
                     /translation="MLVELHAKSDVGRVRRGNEDNFLLLDLGTQQAWTCSEGADSPSE
                     MNRLDVGEKGLVLVVSDGMGGALAGDVASRMAIESVREVMTGNDGNACDPESSLVDCL
                     KHATLQANRAIHYKSLEDSRCSGMGATLTGAAIRHDMLDLVQVGDSRAYVVRGDQIRL
                     ATKDQSLVQQLVDVGQISEEEAETHMFRNVILQALGAQTELTPATARIQLRQGDVLLL
                     CSDGLSGKLRNEEIRQIVSDSSDDLTAACDALVAAANDRGGEDNITVVLAKFSGEDLQ
                     DSAGDRITIELPAMDDDKTLDETETDTQHRTPSL"
     gene            complement(3906..4397)
                     /locus_tag="VIT19_09355"
     CDS             complement(3906..4397)
                     /locus_tag="VIT19_09355"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEY5839231.1"
                     /translation="MENYFWIVWLILGALLIVAEIFSTGFVLLWFGIGALAAALANLA
                     GVTSLPLQFLIFAVVSIGLTAASRTIFVNYFSREKSGGDLKTGADALPGQVGTVVTSS
                     RGALHEGAVKVFGSTWTAYPADGEEPLEAGDRVQVERVKGASIYVRRTGQVPDWRGKE
                     LKS"
     gene            complement(4613..>5100)
                     /locus_tag="VIT19_09360"
     CDS             complement(4613..>5100)
                     /locus_tag="VIT19_09360"
                     /inference="COORDINATES: protein motif:HMM:NF013761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HEY5839232.1"
                     /translation="FKRLRNEFGLNDVGIVLQSYLRRTYDDAQDLLKIPARIRICKGA
                     YNEPPEVAFPDKKDVDENYMRVMKLLLSSGTYHGIATHDPHMINATIRYARDQGIGKE
                     AFEFQMLYGIRRDLQEKLARDGYNMRVYVPYGKHWYPYFMRRLAERPANIWFVMKNLW
                     K"
BASE COUNT         1155 a         1458 c         1415 g         1072 t
ORIGIN      
        1 gtgttatgtc ccatccaaaa cggcgacgag gtggtgagcg ccaggatgtg cggcagaaaa
       61 tagcgcgagg cattcatgat gtgaatctgg cgctcgcggt ccggaatgcc gacgtgaacg
      121 tgcaagccaa agatcaaaag cgaacgagcc acagtctgaa gttcctggac cagcagctcg
      181 tagcgctcat catcgaaaat cttctggtcc tgccagcgtg aaatcggatg agtggacgcg
      241 gccacaatcc taagtccatt cttctcggcc agagacgcga tgacccctcg caggttcgat
      301 atgtcggccc gcgcttcctg aatgttcttg cagataccgg tgccgacttc gatcatcgac
      361 tggatcatct cgggcttgat ttgctcgccg agaatcatct tgccttcatc gagaaactct
      421 gtgacgtgcg aacgcagctc gcgcgacacc ggatcgacga tctgaaactc ttcttcaatg
      481 ccgagtgtga attgatcgaa cataaaccga gccgtcgttc acgggcaacg cccgcgtcta
      541 aaccgtcatt tcatccactg cttcattatg cgccaatcgg gcctgaactt tcggaaacgt
      601 tcgtaaaaca agtgctgaat catggtcagg atcgatcccc atccgccata caagtcgagg
      661 tgaacatgcc actcgcgctc accttcaagc gggtcgatgt aaagaaagtg cagggacgcg
      721 tgtgggcggc ctttttccag aaagccgccg gtgttatcac gatgtctggc gaacgttcgg
      781 gtgaattgtc gcctgccctg caggtcagtt tcaaggtcgg aaacggcgct gaagtacatc
      841 ccgacgccgc cgcgcccgta aacattaacg attcggccaa tatgacgcca taggtcggtg
      901 ccaatcaacc ggccggaaag aaggtcgagc gcctcttgtt tgtcccgcgt cagcgcgtcg
      961 taggcggcct cgtcgccctc gtgaccatag agcccgctga gtttttcccg gtagcgctgg
     1021 cgcttctcct cggaaatctc cgcccaggcg agcggctgtt catcgatcac gaccgccatg
     1081 gtctatgcag gtcgtaaccc aagctccagg gcccggcgcg tatcgtccgt caactcgtga
     1141 aattttaccc ccacgccttc gccgggattg ctgtaaacga cctctccggt gacgataacg
     1201 tgatcgctgc cgatgggtat tctcagcgcc agcatggcgc cgaccggaat gcgcgtctgc
     1261 gtggtcatgt acagaccgcc aagactgatg tctttagtgc cggcgacgcc ggttgattca
     1321 gcgccatcga aatgcacgtc cacgatcaaa cgcgagcgat caaatcgccg ccgatcatcg
     1381 gtcgaaattt cttcagggtc ctctgtttcg gccatggcct gcccttcgaa ctgtggatgg
     1441 cgttaacgcg cgcgattcta ctagatcata gacaattaaa tctattcgtc tcgcaaaccg
     1501 ggcgcgcgaa ccgcacactt gattgacact aagatcgcgc gaagatacta tcgcctttcg
     1561 caatcagctc ccgaaattcc gcttttcgag cttcaactat gggcttcgcc acaacggcaa
     1621 ttcacgcagg caatgaaccg gactcagcca cgggggcggt gagcgtcccc atctatcaaa
     1681 cgtcaactta cgcgcaggac ggccttggca aaaacaaggg atttgagtac gcgcgcactg
     1741 cgaacccgac tcgtctggca ctcgagcgaa acatcgcggc gctggaaggg gcccagttcg
     1801 gttacgcctt cgcgtcgggg atggccgcca tcgatgcgac gttgcggctg ataaaagcca
     1861 acgagcacgt gattgtttcc gacaacactt atggcggcac gtttcggctc ttcagcaaga
     1921 tccttgcgaa ctattgtatc gagttcgact tcgtggatac gtcggacgtt accaacgtcg
     1981 aagccgcaat caaagacaac acgcgcatgg tgtttatcga gacgccgacg aatccggtga
     2041 tgatggtcac ggatttgaaa gctgtcagcg acgtggcgca tgcagcgggc gcccgcgtcg
     2101 tttgcgacaa cacctttatg tcgccgtacc tgcaaaggcc actagagttc ggtgtcgata
     2161 tagtcgttca ttcgacgacg aaattcctta atggccattc ggacggtatc ggtggcgcgg
     2221 tcgtgctcaa caacgaagac gacgcggcgt ggattcaatt cgtccagaac agcgccggcg
     2281 cgattctttc tccgtttgat tcctggctgg ttttgcgcgg cactaaaact ttagccctgc
     2341 gcatggagca gcatgacaaa tccggacgcg cagtcgccgc gtttctcgaa gatcacccca
     2401 aggtgcagaa gatttattac ccgggatcgc tgtcgcacaa acagcacgat ctggcgaagc
     2461 gccaacagaa gggcttcggc agcatggttt cgttcgatgt cggatcgctg gcggcggcgc
     2521 ggacggtgct cgaatcggca aaactctgca cgctcgcgga aagtctcggc ggcgttgaga
     2581 ctctgatttg tcatccggca acaatgacgc acgcctcgat cactgcggaa tcgcgcgatc
     2641 ggctcgggat taccgatggg ttggtgcgaa tttccgtcgg catcgaagac actgatgaca
     2701 tcattgcaga tttggatcag gcgctcgcct cggtttagac cgcggacttg tccgcgcggc
     2761 ggcacaagta ccgtatgtaa acgtttcctg gttgggtgac aacccagcgg cgacaatata
     2821 aaatccctga cgaattaccg acttcaaatt cgcccttaac gctcctcaaa atgctcgtag
     2881 agctacacgc caaatccgat gtaggccgcg tgcgccgtgg caacgaagat aattttctgc
     2941 tcctcgatct ggggacgcag caggcgtgga cttgttcgga aggcgcagac agtccgtcag
     3001 agatgaatcg actggacgtc ggcgaaaaag gtttggtcct cgtcgtttct gacggcatgg
     3061 gcggggcgct ggccggcgat gtcgccagcc gtatggccat cgagtcggtc cgcgaagtga
     3121 tgaccggaaa tgacggcaat gcctgcgatc cggaatcgtc cctggttgat tgtctgaagc
     3181 acgccaccct tcaagccaac cgcgcgatcc actacaagag cctcgaggac agccgttgca
     3241 gcggcatggg cgcgacgtta accggtgcgg ccatccggca cgacatgctc gatctcgtgc
     3301 aggtcggcga cagtcgggcg tatgttgtgc gcggcgatca gattcgcctc gcgacaaagg
     3361 atcagtcgct ggtgcagcag cttgttgacg tcgggcaaat cagtgaggaa gaagccgaga
     3421 cgcacatgtt tcgaaacgtg attcttcagg ccctcggcgc ccagactgag ctaacgccgg
     3481 cgacggcgcg cattcagctt cggcaaggcg acgtgctgtt gctttgcagt gacgggctgt
     3541 cagggaaact gcgcaatgaa gagattcgtc aaatcgtgag cgactcgagc gacgacctga
     3601 ccgcagcctg cgacgcgctg gtggcggccg caaacgaccg cggcggtgaa gacaacatca
     3661 cggttgtgtt ggcgaaattt tcaggagaag atttacaaga ctcagctgga gaccggatta
     3721 cgatcgagtt gccggcaatg gatgacgata agacgctcga cgaaaccgag acagacacgc
     3781 aacaccgcac gcctagtctc tgaggagcgc acgcatcctg cgtgcggttc gcgggcatcc
     3841 ttgcccgctc aatcaaaaca ccggcaggat gccggtgcac cgcaggcaag atgcctgcgt
     3901 tcccgctaag atttcaattc tttcccgcgc cagtcaggca cctgccccgt acgacgaaca
     3961 taaatcgaag cacccttgac ccgctcgact tgcacgcggt cgccggcttc aagcggctct
     4021 tcaccgtcag ccggataagc agtccaggtt gaaccaaaaa ctttgacggc gccttcatgc
     4081 agcgcgcctc gactggaagt aacgaccgtg ccgacctggc ccggcagcgc atcggcgccg
     4141 gtcttcaaat cccccccgga tttctctcgt gaaaaatagt tgacgaagat tgtgcgcgac
     4201 gccgcggtca gcccgattga aactactgcg aatattagga actgcagtgg caggctggtg
     4261 acgcccgcga gattggccag ggccgctgcc aaagcgccga tgccaaacca cagaagcaca
     4321 aacccagttg agaagatctc agcgacgatt agaagagcgc cgagaatcag ccaaacaatc
     4381 cagaagtagt tttccattag gtagcgtgtg tgtcagtccc gcagaacaaa aatcattttc
     4441 catttggcat ttgacattta tcatctgaca tttgtcatgc ccgtgcacat tcgcatggct
     4501 agacccgggc tagcccaact catgacagaa ctttggaact ttgcactgcc acaaatcgtg
     4561 attgccaatt tcaaatggca gatgtccaat gccaaatgta aaatgatctt ttctacttcc
     4621 aaaggttctt catcacaaac caaatattcg ccggacgttc cgcaagccgg cgcatgaaat
     4681 acggatacca gtgcttaccg tacggcacat agacgcgcat attatacccg tcgcgcgcca
     4741 gtttctcctg caaatcgcgg cggatgccat aaagcatttg aaactcgaaa gcttccttgc
     4801 cgattccctg atcgcgcgcg tagcgaatgg tggcgttaat catgtgcggg tcgtgggtgg
     4861 cgatgccatg ataggtgccg ctggagagta gaagtttcat cacccgcata tagttttcat
     4921 ccacatcctt cttatccggg aatgcgacct cgggtggttc attgtaggcg cccttgcaga
     4981 tgcgtatgcg tgccgggatc ttcaacaagt cctgcgcgtc gtcgtaggtt cggcgaagat
     5041 acgattgcag aacgatcccg acatcattca atccgaattc gttacgcagc cgcttgaaga
//
LOCUS       DATDBY010000503         4309 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1676073, whole genome shotgun sequence.
ACCESSION   DATDBY010000503 DATDBY010000000
VERSION     DATDBY010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4309
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1676073"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..965)
                     /locus_tag="VIT19_09365"
     CDS             complement(<1..965)
                     /locus_tag="VIT19_09365"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY5839233.1"
                     /translation="MTSRSTIAALFLFAAIVFVPSSARAQEGEPVVVDEVIAQVNDGV
                     VTLSQLKREMKERVDTLKQNGMSPEQAQAEVEKRKAELIATLINEQLLLAKGKELDLS
                     ERVEAQVNKRMLEVAVENKLNSIEKLEEAMRQSGVDPVETRQTMRTEMMKQAVLENDV
                     DSKLFYGLSIDDLRKYFEANKTKFVKPETVELSEIFLSLAGKPEADVKARANQLVAQI
                     RGGADFGTLATAYSERSQQSKGKVGLFEVINLRPDLAAAIKNVQAGGVGEPLKTDEGY
                     QILRVDARTAGSSTPTFNENKVREVITMERLPKAREQYLQDLRNDA"
     gene            complement(1148..>4309)
                     /gene="mfd"
                     /locus_tag="VIT19_09370"
     CDS             complement(1148..>4309)
                     /gene="mfd"
                     /locus_tag="VIT19_09370"
                     /inference="COORDINATES: protein motif:HMM:TIGR00580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEY5839234.1"
                     /translation="ARVRWRDERFARSLRDRTVYAAEGESFPGWEWLISLGREHQATT
                     FDYLKEAVLVIDEPVAVENFLSSAFQTLEQRHAETDAADDLGLRPAELYLTAEELRSL
                     IDSKQRVELRALGRTVSATDQELALEAEEPKISVGKERGRRRPLFLFPHKDAGRMPAL
                     PGDRLESGLVPTGRTGTGSKRDHEEAGGTPAYPEVEWKAQSVMRYHGRLPDLARDVIT
                     RYANSKATTLFVMPSRGVAERVTEILREYEVNARLTSFEDQSEAPATAQAVVTFGKLS
                     GGFELPGTHAGTSFSPSPQAERGLGGKVGDARNPTPNPSPHAERGGGLRTEFAGGVRP
                     LVVQVEGDLFDEAAEPALERRSTAIKREKKRRARAAAFLSDFRDLKVNDFVVHIDHGI
                     ARFGGLVTLDLGPAQPSPAAIAAPKRGEFMLLYYAEDAKLYVPVERLDLVQRYSSAEG
                     HQPTLDKLGGIGWQKTKAKAKRAMRDMADELLRLYAERKLVEGHSFPADAPWQREFEE
                     GFEYTLTPDQETAIEDVKKDMETATPMDRLLCGDVGYGKTEVAMRAAFKAVMDGKQTA
                     VLTPTTVLAYQHFETFRQRFAPFPIKVELLSRFRSAKEQKEVVKRVEGGEVDVVIGTH
                     RMLSKDVSFRDLGLVVVDEEQRFGVAHKERLKQLKKRVDVLTLSATPIPRTLNMSLSG
                     LRDMSLIETPPSDRLAIQTQVVQSSDTVIKSAIELELSRGGQIFFIHNRVESIETIAA
                     LVKRLVPACRIAVGHGKMNEKQMERVMLDFIDYKYDVLVATTIIENGIDIPRANTIII
                     NRADNYGLSQLYQLRGRVGRSNRRAYAYLLIPAEQELSPIARRRLAAIREFSELGAGF
                     RIAALDLELRGAGNFLGGQQSGHMDALGFDLYTQMLERTVSELRGEQVEDETSVTINL
                     AVDVAIPETYVSDMGQRLRTYKRVSSARDEEALTAIRAETEDRYGRIPESVEHLFAYA
                     RLRQAAEDVGVVSIDRAPGGIAFKLSEKARVAPEKLMEMVRVREGASFTPSGVLRLEL
                     SEEERDEVLAVARRVLLQIRSDG"
BASE COUNT          837 a         1323 c         1188 g          961 t
ORIGIN      
        1 gcgtcgttgc gcaaatcctg gagatactgc tcgcgcgctt tcggcaggcg ctccatggtg
       61 atcacttcgc gcactttgtt ctcgttgaac gtcggcgtcg aagaaccggc ggttcgcgca
      121 tcgacccgga ggatttgata cccctcgtca gtcttcaaag gttcaccgac gccgccagcc
      181 tgaacgtttt tgatcgcagc ggccaggtcc ggtcgcagat ttatgacttc aaacaaacca
      241 accttgcctt tgctctgctg gctgcgttcc gagtacgccg tggccagggt tccaaagtca
      301 gcgccgccgc gaatctgcgc gacgagttga ttggcgcgcg cttttacgtc cgcttcgggt
      361 ttacccgcga gactcaaaaa gatttccgaa agttcgacgg tttccggttt gacgaatttg
      421 gtcttgttcg cctcaaagta tttccgcaga tcatcgatgc ttaagccata aaacagcttc
      481 gaatcgacgt cgttctcgag caccgcctgc ttcatcattt cggtgcgcat cgtctggcgc
      541 gtctcaaccg gatcgacgcc tgactgtcgc atcgcttctt ccaatttttc gatcgaattc
      601 agcttattct cgacggcgac ttcgagcatg cgtttgttca cttgcgcttc gacgcgctcg
      661 ctcaggtcaa gctccttccc ttttgccagc agcagctgct cgttgatgag cgtggcgatc
      721 agctcagctt tccgcttttc cacttcggcc tgtgcctgct ctgggctcat gccgttctgc
      781 ttcaaggtgt ccacgcgctc tttcatttcg cgtttcaact gtgagagggt gacgacgccg
      841 tcgttgacct gggcgataac ttcgtcaacc acgaccggtt cgccttcctg ggcccgggcc
      901 gacgagggga caaaaacaat ggccgcgaac aggaatagag cggcgatggt ggatcttgat
      961 gtcactttat tactccttat agtgaagctc cgggggagcg aaatatttat agccagcaga
     1021 ctaacgcaaa tgattaagct ccattagggg cgtgatattt cgctcctaca aggagctggt
     1081 tccggatcac taccgaatca ggctataaac atttcgcacc tgacggtgct gacttcgagc
     1141 gccaattcta accgtcgctg cggatttgca gcaacacgcg gcgggccacg gccagtactt
     1201 cgtcccgctc ttcctcgctc aattccagcc gcaaaacgcc gctgggggtg aagcttgcgc
     1261 cctcgcgaac tcgcaccatt tccatcagct tttccggcgc aacccgcgct ttttcgctga
     1321 gtttaaaggc gattccaccc ggcgcccggt caatggaaac gaccccgacg tcctcggccg
     1381 cctgcctcag ccgcgcatag gcgaaaaggt gttcaacgga ttcagggatg cggccgtagc
     1441 gatcttccgt ttcggcacga atcgcggtca aagcctcttc atcgcgcgcg gacgaaacgc
     1501 gcttgtaagt ccgcaggcgc tgtcccatgt cgctgacata cgtttcggga atcgcgacat
     1561 cgaccgcgag attgattgtg acgctggttt cgtcttcgac ctgttcgccg cggagctccg
     1621 aaaccgtgcg ctcgagcatt tgcgtgtaaa gatcgaatcc gagcgcgtcc atgtgaccgg
     1681 actgctgccc gcccaggaaa ttgcccgcac ccctcaattc caaatccaaa gctgcgatcc
     1741 gaaatccagc tcctaattcc gaaaactcac gaatcgcggc caaacgccgg cgggcaattg
     1801 gtgaaagctc ctgttccgcc ggaatcaaaa ggtaggcata agctcggcga ttcgagcgcc
     1861 cgacgcgccc gcgcaactga taaagctgag aaagaccgta attatcggcg cgatttatga
     1921 tgattgtgtt cgctcggggg atgtctattc cgttctcaat aatagtcgtc gcgaccagca
     1981 catcgtattt ataatcaatg aaatccagca tcacgcgctc catctgtttt tcattcattt
     2041 tgccgtggcc gacggcgatg cggcacgccg gcaccaggcg ctttacgagc gctgcaatcg
     2101 tctcgattga ctcgacacga ttgtgaatga aaaagatctg accgccgcgc gacagttcga
     2161 gctcgatggc cgacttgatc accgtgtccg atgactgcac gacctgggtt tggatggcga
     2221 gacgatcgct cggcggagtc tcgatcagag acatgtcgcg caagccgctc agagacatgt
     2281 tcagcgtccg cggaatcggc gtcgctgaca aagtcagcac atcgacgcgc ttcttaagtt
     2341 gcttcagccg ctctttgtgc gcgactccga aacgttgctc ttcatcgacg acgaccaaac
     2401 cgagatcgcg aaagctcacg tctttcgaaa gcattcgatg cgtgccgatc acgacatcga
     2461 cctcaccgcc ttcgacacgt ttaaccactt ccttctgttc tttcgccgat cgaaaacgtg
     2521 aaagtaattc aaccttgatc ggaaaaggcg caaaccgctg acgaaacgtt tcaaaatgct
     2581 ggtaggcgag cacggtcgtc ggcgtcagca cggccgtctg tttgccgtcc atcacggctt
     2641 tgaatgccgc ccgcatcgcg acttcggtct tgccataccc gacgtcgccg cacagcaggc
     2701 ggtccatcgg cgtcgccgtc tccatgtctt tcttgacgtc ttcgatcgcg gtttcctgat
     2761 cgggcgtgag cgtgtattcg aacccttctt cgaactcgcg ctgccagggc gcgtccgccg
     2821 ggaaagagtg tccttccacc agtttgcgct ccgcgtacaa acgcagaagc tcgtcagcca
     2881 tgtcgcgcat cgcgcgtttg gctttggcct tcgtcttctg ccaaccgatg ccgccgagtt
     2941 tatccagcgt cggctgatga ccttcggcgc tggagtatcg ctgcacgaga tcgagccgct
     3001 cgaccggcac gtaaagcttg gcgtcttccg cgtagtaaag cagcatgaac tcgccgcgtt
     3061 tgggcgccgc aatcgctgcc ggtgaaggct gcgccggtcc caggtcaagc gtaacgagtc
     3121 ctccgaaccg cgcgatgccg tgatcgatgt ggacgacgaa gtcgtttact ttgagatcgc
     3181 gaaagtcgga aagaaacgca gcggcacgcg cgcgacgttt cttctcgcgc ttgatggcgg
     3241 tgctgcgccg ttcaagcgca ggttcagcgg cttcgtcgaa cagatcccct tcaacctgga
     3301 cgaccagggg acgaacgccc ccggcaaatt cggtacgcaa gcctcctccc ctctccgcat
     3361 gcggggaggg gttgggggtg gggttacgcg cgtcgccaac ctttccccct agccccctct
     3421 ccgcttgcgg agagggggaa aagctcgtac cggcgtgcgt accgggcaat tcgaagccgc
     3481 cggaaagttt gccgaaggta acgacagctt gcgcggttgc cggagcctcg gattgatctt
     3541 cgaatgaggt tagccgcgcg ttcacttcat attcccgcag gatttctgtg acgcgctcgg
     3601 ctacgccgcg gctgggcatc acaaacagag ttgtggcctt tgaatttgcg tagcgcgtaa
     3661 tgacgtcgcg tgcgagatcc ggcaaacggc cgtggtaacg catcaccgac tgcgctttcc
     3721 actcgacttc cgggtacgca ggcgtcccgc ctgcttcttc atgatcccgt ttagagcccg
     3781 tacctgtgcg gcctgtcggg acaagtcccg actctaaacg atcgcctggg agcgcgggca
     3841 tcctgcccgc atccttatgc ggaaacaaga acagcggccg cctacgcccg cgttcctttc
     3901 cgaccgaaat cttcggctct tcggcctcga gcgcgagctc ctgatccgtt gccgatacgg
     3961 tgcgaccgag cgcccgcagc tccactcgtt gctttgaatc tattagcgaa cgcagttctt
     4021 cggcagtgag atagagttcc gccggccgca aaccgagatc atcggcggcg tcagtttccg
     4081 cgtggcgttg ctcgagagtc tgaaacgcgc tcgacagaaa gttctcgacc gcgacgggtt
     4141 catcgatgac gagaaccgcc tctttcagat aatcaaacgt ggttgcctgg tgctcgcggc
     4201 cgagcgaaat cagccactcc cagccgggga agctttcgcc ttcggcagcg taaacggttc
     4261 gatctcgaag cgagcgcgcg aatcgctcgt cacgccagcg cacgcgcgc
//
LOCUS       DATDBY010000504         2957 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1054190, whole genome shotgun sequence.
ACCESSION   DATDBY010000504 DATDBY010000000
VERSION     DATDBY010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2957
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1054190"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(161..703)
                     /locus_tag="VIT19_09375"
     CDS             complement(161..703)
                     /locus_tag="VIT19_09375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839235.1"
                     /translation="MSGKQKDKLHITETPDTSHIKNIDVTHEKSDVDVGSIAKFVIGL
                     LVLTIVTFIGLWGMFRMLQRSETHQEQTQHRSPLAPTADERKPPEPRLQGAPGFAESL
                     EKAAPGQHEEQRIQTTNKGFDPPKDPLWEIKVLRKQWDHVLEHGPTDEHGQRFGMPIE
                     QAKEEVLKQLEKQKAESKRQ"
     gene            complement(722..1906)
                     /locus_tag="VIT19_09380"
     CDS             complement(722..1906)
                     /locus_tag="VIT19_09380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839236.1"
                     /translation="MIQGYTPPAELARVRNIALGVGVVFTLLMIVGALFDRPRFFHGY
                     LVGYIFWVGITVGSLALLMLQHLTGGAWGLVIRRVLEASTRTLPLMILLFVPIVIGLN
                     HIYTWTDPAVMHKTEALQKKAAAYLNPSFFIIRAAIYFAIWSALAMFLNWLSLQQDRA
                     AGSKVKKKMQMLSGPGLGFLILSVTFAAVDWVMSLDPAWYSTIYGLIFVASWSLSALA
                     FTTLVMTWLSARAPMNTVVQRSHYHDWGNLTLALVMLWTYFAFSQYLIIWSANLPEET
                     TWYVARARGGWGKIALIIVILQFAFPFMTLLSRATKKSAQKLAALAALILVMRILDAI
                     WLVEPTYSHGHFVLNWMDFVAPVAIGGLWIGTFAWQLQKRPLLPINDPQLEQALVAHT
                     GH"
     gene            complement(2070..2774)
                     /locus_tag="VIT19_09385"
     CDS             complement(2070..2774)
                     /locus_tag="VIT19_09385"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY5839237.1"
                     /translation="MLNFREQKAEGGKQKAAKARRLIAFCLLLFAFSLLLTGCRRDMQ
                     DQPRMKPYRANSLYNGQQPLIEGTVPRGYLRENREFFFGKKLTAESLSGEQQSQRPGQ
                     TTPGAGANAFPDDVETIPMTITKADLDRGQERYNIYCSVCHGMTGYGDGIVARRGFNR
                     PSPASYHQDRLREAPVGHFFDVMTNGWGAMPSYASQVPVGDRWRIAAYVRALQLSQMK
                     AGTGGNPTVREGATQH"
     gene            complement(2761..>2957)
                     /locus_tag="VIT19_09390"
     CDS             complement(2761..>2957)
                     /locus_tag="VIT19_09390"
                     /inference="COORDINATES: protein motif:HMM:NF023249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="quinol:electron acceptor oxidoreductase subunit
                     ActD"
                     /protein_id="HEY5839238.1"
                     /translation="VFGMLALNKLPQPYHPVFNAPSFALATRDSFFLVIEAKDLKFNH
                     DEAVRFLKNLDPREVVDVEL"
BASE COUNT          625 a          881 c          805 g          646 t
ORIGIN      
        1 ccgtacaggg gcgagttcgg tcgcggaacg ccgggctgcg caaagcagta ggcggtgggc
       61 agaaggcaga gggcagcaag aagaaggcag ttagacgccg atctaattaa cattgaaatt
      121 gttttggccg ttgaattcat attcaaatac tgctttctgc ctactgcctt ttgctttctg
      181 ccttctgctt ttccagctgt ttcaacactt cttccttcgc ttgctcgatc ggcatgccga
      241 agcgttgacc gtgttcgtcg gtcggcccgt gttcgagcac gtgatcccat tgtttgcgca
      301 ggactttgat ctcccacagc ggatccttgg gcgggtcgaa tcctttgttc gtggtttgaa
      361 ttcgctgctc ttcgtgttgg cccggcgccg ctttttcgag gctttcggcg aaacccggcg
      421 cgccctgcaa gcgcggctca ggcggcttgc gctcgtcagc ggtcggcgct aaaggtgacc
      481 gatgttgggt ctgttcttga tgcgtctcgg acctttgcaa catgcgaaac atgccccaca
      541 agccgatgaa tgtaacaatc gtgagcacca gcagcccgat gacaaacttc gcgatactgc
      601 cgacatcaac gtcgctcttc tcgtgcgtca catcgatgtt cttgatgtgc gacgtgtccg
      661 gcgtctcggt tatgtgcagc ttgtctttct gcttaccgct cactgctcac tgctcacttt
      721 ctcaatgtcc cgtgtgcgcg accagcgcct gctccaattg tggatcgtta atcggcagca
      781 gcggccgctt ctgcaactgc caggcgaacg ttccgatcca gagtccgcca atcgcaaccg
      841 gcgcgacaaa atccatccag ttcaaaacaa aatgcccgtg gctgtacgtg ggttcgacca
      901 gccaaatcgc gtcgaggatt cgcatcacca gaatcagagc agcgagcgcc gccaacttct
      961 gcgcgctctt tttcgtcgcc cgcgacaaaa gcgtcatgaa cggaaatgcg aattgaagaa
     1021 tcacgataat taaggcgatc ttgccccaac ctccgcgcgc gcgggcgacg taccaggtcg
     1081 tttcctcggg caaatttgcc gaccagatga ttaggtactg cgagaacgcg aagtacgtcc
     1141 aaagcatcac cagcgccagc gtcaggtttc cccaatcgtg ataatgcgaa cgctgcacga
     1201 ctgtgttcat cggcgcgcgc gctgagagcc aggtcatcac cagcgtggta aacgccagcg
     1261 cactcaggct ccaggatgcg acaaaaatca gtccgtagat ggtcgagtac caggccggat
     1321 caagcgacat cacccaatcg accgccgcaa acgtaacgct caggatcagg aatcccagtc
     1381 cggggccgct cagcatctgc atcttctttt ttactttgct tccggctgct cggtcctgtt
     1441 gcagcgagag ccagttcaaa aacatggcca gagcggacca gatggcgaaa tagatcgcgg
     1501 cgcgaatgat gaagaacgac ggattcagat acgcggcggc ctttttctgc aacgcctccg
     1561 tcttgtgcat gacggctgga tcggtccacg tataaatgtg attcaggccg atgacgatcg
     1621 gcacaaacag tagaatcatc agcggcagcg tgcgcgtcga cgcctcgagc acgcgacgga
     1681 tgaccagtcc ccaggcgccg cccgttaggt gttgcagcat gagcagcgca agactgccga
     1741 cggtgatgcc gacccagaaa atgtatccaa ccagatagcc gtgaaagaaa cgtgggcgat
     1801 cgaagagcgc gccgacgatc atcagaagcg taaacacaac gccgacgccg agcgcgatgt
     1861 tgcgcacgcg agcgagttct gccggaggtg tgtagccctg gatcatttaa cgtttctcag
     1921 tttcccctcc ccgcacgcgg ggtggggata acggggtggg gttggcggtc gtgtctaacc
     1981 tctccccaac ccctctccgc tcgcggagag gggcttaaag ccgtcgcgtt tgctctccca
     2041 aagggagagg gagtaagaat catctccact caatgttgtg ttgcaccctc cctcacggtc
     2101 gggtttccgc cagtgcccgc cttcatttga ctcaactgca aagcgcgaac gtacgcagcg
     2161 attcgccagc gatccccgac cggaacttgc gaagcgtaac tcggcatcgc gccccagccg
     2221 ttcgtcatta cgtcaaagaa atgtccgacc ggcgcctctc gcagacgatc ctggtgataa
     2281 ctcgccggcg aaggccggtt gaatccgcgc cgcgcgacaa tcccgtcgcc gtaacccgtc
     2341 attccatgac agaccgagca gtagatgttg tagcgctcct gtccgcgatc cagatccgcc
     2401 ttcgtgattg tcatcgggat cgtttcgaca tcgtccggaa acgcattggc cccggcgccg
     2461 ggcgttgttt ggcccggtcg ctgactttgc tgctctccgc tcagactctc ggctgttaat
     2521 ttttttccaa aaaagaactc gcgattctcc cgcaaataac cacgcggcac tgtgccttca
     2581 atgagcggtt gctgcccgtt gtaaagcgag ttcgcgcgat atggtttcat gcgcggctga
     2641 tcctgcatgt cgcgtcgaca accagtgagc agaaggctga aagcaaaaag cagtaggcag
     2701 aaagcgatca aacgacgcgc tttcgctgcc ttctgctttc cgccttctgc tttctgttct
     2761 ctaaagttca acatccacca cttccctcgg atccaaattc tttagaaacc gcacggcttc
     2821 atcgtggttg aacttcaaat cctttgcttc gatcaccaga aagaaactgt cgcgcgtcgc
     2881 cagggcaaag ctcggcgcgt tgaaaaccgg gtgatagggc tgcggcagct tgttcagcgc
     2941 cagcataccg aacacgg
//
LOCUS       DATDBY010000505        14413 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2291615, whole genome shotgun sequence.
ACCESSION   DATDBY010000505 DATDBY010000000
VERSION     DATDBY010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 14413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14413
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2291615"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..752)
                     /locus_tag="VIT19_09395"
     CDS             complement(<1..752)
                     /locus_tag="VIT19_09395"
                     /inference="COORDINATES: protein motif:HMM:NF024915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839239.1"
                     /translation="MNYRNKFFAFAVIAAFAAIAPGQSTSDAALSSIRSSDRAERAAK
                     NKVALPPAEHLRRAGIYLANRLFSDARAHWEALVENYPNDPGVPSALLGMGRSYYVER
                     RYDDARKVYERLARTYPDTKEGREGLNFSASSFLRMGRGAQAAERYAEYIEKYPNGER
                     IDTAHLNAIDGYRESGRLQDAITWVERTRQRFAGTAIERNATFARLRVDIGAKDWPNA
                     VTTADDLLRSRLAGSNTTTDEVLYLKAHALDSA"
     gene            complement(736..1170)
                     /locus_tag="VIT19_09400"
     CDS             complement(736..1170)
                     /locus_tag="VIT19_09400"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY5839240.1"
                     /translation="MPETQHKATIQFAGDDVFVGVSPSGHAQVVETNSQRSMAATPME
                     LLLLALGSCTGVDVISILKKKRQRVTDYRIEVSGERRDDHPRAYTRMFVKHIVHGRGV
                     SPQAVAQAIELSDTKYCSVAATLRGAAEIVTTYEIIEDELPE"
     gene            1460..3019
                     /locus_tag="VIT19_09405"
     CDS             1460..3019
                     /locus_tag="VIT19_09405"
                     /inference="COORDINATES: protein motif:HMM:NF024833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YMGG-like glycine zipper-containing protein"
                     /protein_id="HEY5839241.1"
                     /translation="MRRRLIATALSVTCLLLIPIAAQAQTKTYKGTFQTVRRLIVRIE
                     NRSANFSNSLQNWSSRNPNATYSAAAGEDINLFVRDFDQSARQLRDRFDARQATASDV
                     QDVLNRAARIDVFLGRHTIDARTRNQWTLLRTDLNQLASAFSVRWPQVGTTYPPSNTY
                     PPYDDTQGQFRTGLTGTYRVDVSRSDNARDAAERATRNLALSERRRVLDAVTQRLEAP
                     NELALDVRGRNVTIASTRAPQISFVADGRQRVETSSTGRTIRSRATVSGTQLMVSTTG
                     DRGNDFSVTFDSVDNGRRLNVTRRVYVQGLNSPVVVQSSYDKTANVARFDIHDPRNVP
                     SSTAGGGFVVPDGTRIVGTLENTLSTRTSRVGDRFTMRVTGPREFEGAIIEGHVSQVE
                     RSGRLTGRSVLTLDFDNIRLRDGRSYQFGGIVEEVRETDGDIVRVDTEGTVRDDNQTS
                     RTTTRTAIGTAVGAIIGAIAGGGKGAAIGAIVGAGGGAGSVYVEGRNDLELQSGTEIT
                     LRAGAPNTTRR"
     gene            complement(3074..3844)
                     /locus_tag="VIT19_09410"
     CDS             complement(3074..3844)
                     /locus_tag="VIT19_09410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839242.1"
                     /translation="MELIEQTGKLTQADRRAERMWNAAPWLALMLITLVPPVVLSFIA
                     LLIGGAPLWLLAIASLPVSFLIAVVVAATLLFFRRNWANTVRERLASDGITADEVDWF
                     RSELTKNEKRALKAMEQPQPLLADAYRETIALRLNATRLASNARRELLLVERRLSRAR
                     YLNSPDTKVLMEELNRDRARLEQLKQEGSARRAEAEARLQMIEAAASRGASWDETNFM
                     LQRLDEGRKNIPLGLENERARQQLREDTQRELRKELTP"
     gene            3960..4892
                     /locus_tag="VIT19_09415"
     CDS             3960..4892
                     /locus_tag="VIT19_09415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839243.1"
                     /translation="MPRFPKVFAALPLLVLLLAAQLSAGQGSSRRSRGAPRPVTIPVT
                     IKVNKPETEIRVVDLMVREDGEIQSLLSIRRPADNPVTLAVLLQDDLVSSIASEARGV
                     SNFIRDLPAGSRVMVGYIRSGSLQVRRRFTTDLERAAASVRPPLSSANASPFNPYVEI
                     IEALRRFDSQPLGRRAILVVSDGLDVSRGLDSSSPSASIDLARAIREAQRRGVAIYSI
                     FAPPAVSGNRLLIGNGQSSLQRLSDETGGRAFFQGTSAPVSFQPFLREISSTLERQIA
                     LTYLSTHPNKGFHRLEVKPLDRDVEVRHPAGYAR"
     gene            complement(4896..5162)
                     /locus_tag="VIT19_09420"
     CDS             complement(4896..5162)
                     /locus_tag="VIT19_09420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839244.1"
                     /translation="MPESQRTATHSQTFVAAAETFEFETVEQENGQATVIRFNLDDPR
                     YQAGDVVLVLSGTDVHFHGMIGKIADGTAIATDRRGSLLPATTQ"
     gene            complement(5189..5265)
                     /locus_tag="VIT19_09425"
     tRNA            complement(5189..5265)
                     /locus_tag="VIT19_09425"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5229..5231),aa:His,seq:gtg)
     gene            complement(5352..5427)
                     /locus_tag="VIT19_09430"
     tRNA            complement(5352..5427)
                     /locus_tag="VIT19_09430"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5392..5394),aa:Arg,seq:tct)
     gene            complement(5541..5789)
                     /locus_tag="VIT19_09435"
     CDS             complement(5541..5789)
                     /locus_tag="VIT19_09435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839245.1"
                     /translation="MNLDKGLPLAERLQRLDHIQARRFLKLAGTVLEIATEGILRHLA
                     ACDRMDVNPDISAVREIIDDALNGRRVYAEAAEITRAA"
     gene            complement(6179..6490)
                     /locus_tag="VIT19_09440"
     CDS             complement(6179..6490)
                     /locus_tag="VIT19_09440"
                     /inference="COORDINATES: protein motif:HMM:NF012442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEY5839246.1"
                     /translation="MATTATGKKRMTQSDVINYFAERTDMKRAQVKQLFEDLANLATT
                     EVKSNGEFVLPGFGKLVRSERKAREGRNPATGETIQIPAKTTLKFRVGKAMKDSVLPR
                     K"
     gene            complement(6671..6747)
                     /locus_tag="VIT19_09445"
     tRNA            complement(6671..6747)
                     /locus_tag="VIT19_09445"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6711..6713),aa:Pro,seq:tgg)
     gene            complement(6796..7416)
                     /gene="rdgB"
                     /locus_tag="VIT19_09450"
     CDS             complement(6796..7416)
                     /gene="rdgB"
                     /locus_tag="VIT19_09450"
                     /inference="COORDINATES: protein motif:HMM:TIGR00042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEY5839247.1"
                     /translation="MKPTELLVATGNHGKLREIRALLNDLPITLVSLADFPTIEEVAE
                     TGSTFAENAALKAFGYARQSGVLTLADDSGLEVDALDGAPGVRSARYLGDHASYVDRM
                     NALLIALKSANDVARTARFVCALAIASDKQEMLYTTEGTCEGRIADSPRGSGGFGYDP
                     VFLPEGFTQTFGELSAGIKNGISHRGRALAKAHEFLASLTATSTTG"
     gene            complement(7413..9026)
                     /locus_tag="VIT19_09455"
     CDS             complement(7413..9026)
                     /locus_tag="VIT19_09455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839248.1"
                     /translation="MSAYVPAESLAFVEVNDLMDVADGITGTEAWRVLAPPLGAPSQL
                     IPYSWSIKLARWTGIGSAEAVLLARSQFGLFFTQAQATESANTLTIKPLAALVIETHT
                     SQRRMKGVVEKHVGQFAQRSFRGVSIARKQIDGVELVEWKSPDNTRQLILAVVDTVAI
                     VGNDESVVLRCIEVRRGRQPSLATNQQLQTMKQQLRGSQAPVFGFVPKAGVKAVIQAW
                     AFARAGNAADAAAIAPLISNAFGNLIDGFAWTSRLDQSGAEDQSRVALAQGISQQLSD
                     DLTPDPPGDKLDFSFVPAEAISVTSYQLRNPASFWRELNAVVSSRSDVLTAVASRPLL
                     KALLEPYGISDPDNFFPAIGPRLQLVRLDTSTPAVLIAQTFDKLALRKLTEQRLGRQP
                     KTEKFDDTEILAGPDGWSFAFAGEYFLTGPADAVRRCLDAKARGQSIATNGSFTRARS
                     TIDVSLPVVSLTLSPDGPTAISFVELFSSQERSAFSTNAAVIQQGAASLPHSVSVTMM
                     KGDAIEWSSRSSFGLLGSLFTAFAPERLR"
     gene            9529..10590
                     /gene="pilM"
                     /locus_tag="VIT19_09460"
     CDS             9529..10590
                     /gene="pilM"
                     /locus_tag="VIT19_09460"
                     /inference="COORDINATES: protein motif:HMM:TIGR01175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus assembly protein PilM"
                     /protein_id="HEY5839249.1"
                     /translation="MMFKRGKKSMVGVDIGSSSVKAVELQGRGKDLQLLSLGFEALEA
                     DSVVDGQIIELNAVSNAISNIFNEHKIKTTQVAAGVNGHSVIVKNIVLPQMSDGELQE
                     SFAWHAEEHIPFDISDVNLDYHVMDRSGDAIHVLMAACKRDKVANLKQTIQLAGKQPT
                     IIDVDAFALQNCYELNYDPQPGQVVALLNIGASTTNINILNGVRSVFTRDATFGGNQY
                     TSLLQKELGLTFDQAESVKRGMPLPEGAEVREVGPIMDTVSDILALEIQKTMDFYRAT
                     VEDGDSAVQKILVSGGGSKLTGLADFLARRFEVSVEMFDPFRKIKVDARGFDPDYMRE
                     IVPEMAIAVGLALRGVDAR"
     gene            10587..11276
                     /locus_tag="VIT19_09465"
     CDS             10587..11276
                     /locus_tag="VIT19_09465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839250.1"
                     /translation="MIKVNLLDSITDRSVGVAFVEDKVSSARTQTFLVALTVMALLIL
                     GVGYDYVSTNRKHQDAVQELDRQTRINTQMNAVKKEQGELEKKIADINLRVQAIQKLR
                     ASQQGPSAVLEEIKLRFDGVPGLYLRSVELKESEIIIKGESPNEAAVTRFGQSMEFSS
                     GLFTNLNIETAREMLVSKSAGGSSSTAATAAADSALPQPEVVAFTIKATYGQNKQQSS
                     NPAPNGQVAKK"
     gene            11298..11930
                     /gene="pilO"
                     /locus_tag="VIT19_09470"
     CDS             11298..11930
                     /gene="pilO"
                     /locus_tag="VIT19_09470"
                     /inference="COORDINATES: protein motif:HMM:NF016253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HEY5839251.1"
                     /translation="MKIGSLNNIPWYARLSIFVALAVGFYAGFWYFVTRGKRQETKEL
                     TARIEVLKKQNVEAQIASQRLSEFRTQYKNKQQELDELRALLPEQRELTNVLQGIQDR
                     AKASSLQVRKFTPKDDVQQDFYSGKKIEVAVQSSFSGLRQFFDQMAKYQRIVSITNFE
                     IKQMDKQMANKTVEARFDLTAYYVSSEKLQKQAPPPPPQGTQPAPPAPGK"
     gene            11962..12576
                     /locus_tag="VIT19_09475"
     CDS             11962..12576
                     /locus_tag="VIT19_09475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839252.1"
                     /translation="MNYERIIRLSLALVIAATTITASAVLVSAQEATKPEAPAKQTRK
                     GGRDPFKKYQPPVRLVKATTKLDAPPIQVRIERYRAQKLAAAAAHVPPPKPTTALLIS
                     EMQVTGIFRTPRGWAAMIEATPIKLSYVIYPGEAFFDGQLVAIEEGSLTFRRDVVWLD
                     GRREKSTEVKQLRKPSPVEDMTAKAAPANAPATEAPKPAAPEKQ"
     gene            12764..>14413
                     /gene="pilQ"
                     /locus_tag="VIT19_09480"
     CDS             12764..>14413
                     /gene="pilQ"
                     /locus_tag="VIT19_09480"
                     /inference="COORDINATES: protein motif:HMM:TIGR02515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HEY5839253.1"
                     /translation="MPKQSLKLKVAKACAIACIVGMSGNTFVVAGKSIAIKSETAAVA
                     RTDFSPQPQPTPPADSPAAQNQTRQSDEGRRYGAPGFLGEPINLNVVNADIRDILNYI
                     TEQYGINFVIDSSVGAVPVTVNVQDVPWNYALDALLRANRLGVEVNGNILRVATSDIL
                     AKEAEVQKIISDARLDNSPLVTEFVRLNYARASGTLAQAAGSTAGYSGGATSTSFSGG
                     SGGDATGGGGDQGLLPIIKRRLSRRGAVEVDGRSNTLIITDVKENIEAVRQLVAILDQ
                     PEPQVEIEVRVIIAQRNFSRDLGAQMSLSVANPLSGAVGSFSTLPQPSLGGGNSGQQD
                     GVAPRNQDPIRDATSRFMGPFQPNGNLSAASPNTVIGLTTGLFGTAQIGLLITAAENR
                     GEAKTVATPRVTALNNRPAQIESGTQIPVQTTQATGGGTTVTTTFVSVPLRLSITPQI
                     TDAGTVVLRVTIENNTLNPAIAVGGVPGIDTQRMQSEVLVPDGGTTVMGGVLADIDST
                     SRHRTPGAASIPILGNLFKRKSVIKSSLEILFFITPKIYRPD"
BASE COUNT         3246 a         4184 c         4020 g         2963 t
ORIGIN      
        1 gcactgtcca gagcgtgagc tttcagatag agcacctcgt cagtggtcgt gttggatcca
       61 gccaaccgcg accgcaacaa gtcgtctgca gtggtgaccg cgttcggcca atctttggca
      121 ccgatgtcca cgcgcagtcg cgcgaaggtg gcgttgcgtt caattgcagt gcccgcaaat
      181 ctttggcgcg tacgttcgac ccaggtgatt gcatcctgca atcggccgga ttcgcgatat
      241 ccgtcgatcg cgttcaaatg cgccgtgtcg atgcgttcgc cgttcggata tttttcgatg
      301 tattcagcgt aacgttcagc ggcttgcgcg ccgcggccca tgcgcagaaa cgacgacgcc
      361 gaaaagttca ggccttccct gccctctttc gtatcgggat aggtcctcgc gagccgctcg
      421 taaaccttac gcgcgtcgtc gtaacggcgc tcgacgtagt acgaacggcc catgccgagc
      481 agtgctgagg gcacgccggg gtcgttcgga tagttttcga ccagcgcttc ccaatgcgca
      541 cgcgcatcgg aaaacagccg gttcgccagg taaatgcccg cccgccgcag atgttccgcg
      601 ggcggcaacg cgaccttgtt cttcgcggcg cgttcagcgc gatcgctcga acgaattgag
      661 ctcaacgccg catcactcgt ggactgacct ggagcgattg cggcaaaagc cgcgatgaca
      721 gcgaaagcga aaaatttatt ccggtaattc atcttcgatt atttcgtaag tcgttactat
      781 ttcagcggcc ccgcgcagcg tcgcggcaac gctacagtac ttcgtgtcag agagttcgat
      841 cgcctgtgcg accgcctgtg gcgatacgcc acgaccgtgc acgatgtgct ttacaaacat
      901 cctggtgtaa gcgcgtggat gatcgtcgcg acgctcgccg cttacttcga tgcggtaatc
      961 cgtcacgcgc tgtctcttct tcttgagaat tgagataacg tcgacgccgg tgcagcttcc
     1021 caacgcgagc aacagcaact ccatcggtgt ggcggccata ctccgttgcg aatttgtctc
     1081 gaccacctgg gcatggccgg acgggctgac accgacgaaa acgtcgtcac cggcgaactg
     1141 aatcgtcgct ttatgctggg tctcaggcat tttaatcgcc agatttcaat ctcaacgaaa
     1201 gaataacacg gctgttttta aaacgcctga tgcacgatga tcgtactgaa tccccgcaac
     1261 aaaaacacca tctgcactaa ctttgtaaca gagctttcga caacgcgcct ggttttagcc
     1321 gaatcacatc tttaggcctc caactacttt caaatctctc tcacgttccc tccccaggtg
     1381 gtacagcatt tgattactac ctggtctggc cccttgggcc ctccccgatt caatacgcga
     1441 ttaatgagga ggaagtaaga tgagacgacg cttgattgca acagctttat cggtgacctg
     1501 cctgctgctg atacctatag cagcgcaggc acaaacaaaa acttacaaag gaacattcca
     1561 aacggtgcga cgactgattg tccggattga gaatcgatcc gcgaacttca gcaatagcct
     1621 tcaaaattgg tccagccgga acccaaacgc gacatactcg gcggccgctg gtgaagacat
     1681 taaccttttc gtgcgtgact tcgatcagag cgcgcgccaa ttgcgcgatc gctttgacgc
     1741 gcgccaggcg acggcttcgg atgttcagga cgtgctgaac cgggccgccc ggatcgatgt
     1801 gtttctgggc cgccacacca tcgatgcgcg gacgcggaac cagtggacgc tgctgcgaac
     1861 tgatctaaat cagctcgcga gtgcattcag cgtgcgctgg ccgcaggtgg gcacgacgta
     1921 tccgcccagc aacacgtatc cgccatacga cgacacacag ggtcaattcc gcaccggtct
     1981 gaccggtacg tatcgcgtcg atgtctcacg tagtgataat gcgcgtgacg cggcggaaag
     2041 agccacgcgg aatttggcgc tgagcgagcg ccgccgcgtg ctcgatgcgg tgacgcagcg
     2101 actcgaagcg ccgaacgagc tggcgcttga tgtacgcgga cgcaacgtga cgattgcttc
     2161 gacacgtgca ccgcagattt cattcgtggc cgacggccgc cagcgggtcg aaaccagctc
     2221 gacaggtcgg acaattcggt cgcgcgccac agtgagcggt acgcagttga tggttagtac
     2281 gaccggcgat cgtggcaatg actttagtgt tacgttcgac tcggttgaca acggccggcg
     2341 tttgaacgtc acgcgccgcg tgtacgtgca gggtctaaac tcgcctgtcg tggtccaaag
     2401 ctcgtacgac aagacagcca atgtcgcgcg ctttgatata cacgatccgc gcaacgtccc
     2461 gagctcaact gcgggcggcg gtttcgtcgt gcccgacggt acccgcatcg tcggaacttt
     2521 ggagaacact ctttcaaccc ggacaagtcg cgtcggtgat cggttcacca tgcgcgtcac
     2581 aggtcctcgt gaattcgaag gggcaatcat cgaaggtcat gtgtcccagg tcgaacgcag
     2641 cggccggctg acgggacgat cagtcctgac gttggacttt gacaacattc gactgcgcga
     2701 cggtcgcagc tatcagttcg gcggcatcgt tgaagaagtg cgcgaaacgg atggcgatat
     2761 cgtgcgggtc gacacggaag gaaccgtgcg tgatgacaac cagacgtcgc gaacaacgac
     2821 gcggactgcg atcggcacgg ccgtgggtgc aattatcggc gccattgccg gtggtggtaa
     2881 gggtgcggcg atcggggcca tcgtcggcgc aggcggcggc gccggttcgg tgtacgtcga
     2941 gggccgaaac gatctcgagc ttcagtcagg aaccgagatt acgctgagag ccggggcgcc
     3001 aaacacgaca cgtcggtaac tctcgattga tttgttatga aggcgagatc gagcgatcgg
     3061 tctcgcctct tttttatggg gttagttctt ttcgaagttc tcgctgcgta tcttcgcgaa
     3121 gctgctgtct cgctcgctca ttctcgagac cgagtggaat gttcttacga ccctcgtcca
     3181 aacgctgaag catgaaattc gtttcgtccc agctggcgcc gcgactggcc gccgcttcga
     3241 tcatctgcaa acgagcttcg gcttccgcgc ggcgtgccga accctcctgc ttcagttgtt
     3301 ccagccgcgc gcgatcgcga ttcaactctt ccatcagcac tttcgtatca ggcgaattga
     3361 gatagcgcgc gcgactgagg cggcgctcaa ccagtaacaa ctcgcgccgc gcatttgacg
     3421 ccagacgcgt cgcgttaagt cgcagcgcaa ttgtctcgcg atacgcgtcg gccaggagtg
     3481 gctgtggttg ctccattgcc ttcagcgcgc gcttttcgtt tttcgtcagc tcagagcgga
     3541 accagtcaac ctcgtccgcc gtgatgccgt cggacgctaa ccgttcgcga acggtgttgg
     3601 cccaattgcg acgaaagaag agcagagtgg ctgcgacaac gacggcgatt aaaaacgaaa
     3661 cgggcagcga ggcaattgcc agcaaccaga ggggcgcgcc gccgatcagc agcgcaatga
     3721 acgagagcac gaccggcggc accagcgtga tcaacatcaa cgccagccac ggtgctgcat
     3781 tccacatacg ctcggcgcgg cggtcggctt gggttagttt gcctgtttgc tctataagtt
     3841 ccatcgacca gtaattgtaa aatcataccc tgcctgacat ttcaggccaa cgaacggcgt
     3901 tttggttgaa tcagaccctt gtaatatgat tcctgcccgt taagatacga ttcaaacgca
     3961 tgccccggtt tccaaaagtg ttcgccgctc tgccgctgct ggttctcctg ctcgcggcgc
     4021 agctctccgc tggccagggc agctcgcgcc ggtcgcgtgg cgctccacgt ccggtcacga
     4081 ttcctgtaac cattaaagtt aataagcccg agaccgagat ccgtgtggtc gatctgatgg
     4141 tccgcgaaga cggcgagatt cagagcctgc tttccatccg ccggcctgcc gacaatcccg
     4201 tgacgctggc ggtgttgtta caggacgatt tagtgtcgtc gattgccagc gaggcgcggg
     4261 gcgtcagtaa tttcatccgc gacttacccg ccggatcacg cgtgatggtg ggctacattc
     4321 gcagcggcag tttgcaagtg cggcgccggt tcaccaccga tctggagagg gcggcggcaa
     4381 gtgtgcgacc gcctctcagc agtgcgaatg ccagtccatt caatccttac gtcgagataa
     4441 tcgaggccct acgccggttt gattcacaac cgctcggacg ccgagcgatc ctggtagtct
     4501 ccgacgggtt ggatgtttcg cgcgggctcg acagctcttc tccgtccgcc agcatcgatc
     4561 tcgcccgggc gatccgcgag gcccaacgtc gcggcgtcgc tatttattca atcttcgctc
     4621 cgcccgcggt ttcgggtaac cggctcctga tcgggaacgg acagagttcc ctacaaagac
     4681 tttctgacga gacaggcgga agagcttttt tccagggcac atcggccccc gtcagctttc
     4741 aaccattttt gagagagatt tcttcaacgc tcgagcggca gattgcgctg acttatttgt
     4801 caacgcatcc gaacaaggga tttcatcggc tggaagtgaa gccgctcgac cgtgacgtag
     4861 aggttcgtca ccccgccggc tacgcgcgtt gaggcttact gagttgttgc aggcagcagc
     4921 gagccccgac gatcagtagc gatcgccgtc ccgtccgcaa tcttcccaat cattccgtga
     4981 aaatgaacgt cggtgccgga taacaccaga acgacgtcac ccgcctggta gcgaggatca
     5041 tccagattga accgaatcac agtagcctga ccattttcct gttcgacggt ttcgaattcg
     5101 aaagtctcgg cggccgcgac aaatgtttgc gaatgagtag ctgttcgttg agattctggc
     5161 atttaatctc ccgtgggatt tttcgtggtg gggcggctag tgggacttga acccacgacc
     5221 tcctgatcca caatcaggcg ttctaaccaa ctgaactata gccgccacaa ataaaagggc
     5281 ttagaattgc aatcaactct tgtttacaac actcgcgtag tttcgacaag cgagcgtgga
     5341 tacttcacaa gtggtgcccc cggcaggact cgaacctgcg gccctctgct tagaaggcag
     5401 atgctctatc cgctgagcta cgggagccca agttgcgccg agatgttagc acgcaccgtt
     5461 actcgcgaaa actgactgag caaaacaaga ggccgcccca atggggcagc ctcggttcaa
     5521 attgaattgc gaagtctcga ttaagctgcg cgcgtaattt ctgccgcctc agcgtacacc
     5581 cgtcgaccgt tgagcgcgtc gtcgatgatc tctcgcaccg cagaaatatc cggatttaca
     5641 tccatccgat cgcacgcggc gagatgtcgc aggatacctt cggtcgcaat ctccaaaacc
     5701 gtgccggcga gcttcaaaaa gcgccgtgcc tgaatgtgat cgagtctctg aagccgctca
     5761 gccagcggca ggcccttgtc aagattcacg atttaatatt ctctctttct aaacagccaa
     5821 atatcagctt gttgatttgt ataaccatag atgccgccga aacttcgcag gatgcaaagt
     5881 ccttgccgtt tcggttattt tgcacagtac gaacccagtc gaacccaaaa agaggggcca
     5941 cagaacgcct aaactgtgac tttgaaaccc gaaactataa catggaggcg cgcttacgaa
     6001 aagatttttt taagcaggaa ttgtaaattc tttgtcacgg actaaagtgg ccaaattggc
     6061 cggaaaggcg cgggtttcat aggctgcggt aaagaaaaca ccggcgaagc gcccgctcag
     6121 ggacactacg ccggtgcaga actgctcgcc gcgatactga ggttcggcga aaagcgtgtt
     6181 acttacgtgg cagaacggaa tccttcatcg ctttgccaac gcggaatttc agcgtggttt
     6241 ttgcggggat ttgaatcgtc tcgcccgtcg ccggattccg gccttcgcgg gcttttcgct
     6301 ctgagcgaac gagctttccg aatcccggaa gaacgaattc tccgttcgac ttaacttcag
     6361 tggtcgcaag gtttgcgagg tcttcgaaca gctgcttaac ctgcgccctt ttcatgtcag
     6421 tccgctcagc aaagtaatta atcacatcgg actgggtcat gcgtttcttt ccagttgccg
     6481 tggtcgccat ttgtggtttc ccacctccaa aacttcagca aaattgaaaa actgcctgca
     6541 agatatacca cagaccgtcg ataaagtctg caaaaaagcg caaatttccg gccttttttg
     6601 cagggcaagt tggggaaagg aaccggtggc gcgggcctga aacccgcccg tgaggtcttc
     6661 tctaacgtgt tggtcggggc gagaggattc gaacctccga cctctcggtc ccaaaccgag
     6721 cgcactacca ggctgtgcta cgccccgtct tgttcagcaa acggttgttc agaattactt
     6781 aacggacgcg ccattctagc cagtggtaga agtagcggtc aaggaagcca aaaattcgtg
     6841 agctttagcc aaagcgcggc cgcgatggct gatgccgttc ttgatgccgg ccgacaactc
     6901 gccgaatgtt tgcgtgaaac cctcagggag gaagactgga tcgtagccga acccgccgga
     6961 tcctcggggc gagtcggcaa tccgtccctc gcacgttcct tcagttgtat agagcatctc
     7021 ttgtttgtca gacgcaatcg caagggcgca aacaaatcgt gcggttcgcg caacgtcatt
     7081 tgcggatttc agggcaatca acaaagcgtt catccgatct acgtaagaag cgtggtcacc
     7141 cagatagcgc gcggagcgca ccccgggcgc gccatcaagc gcatcaactt ctaaccctga
     7201 atcgtcagcg agcgtaagaa ccccagattg tcgagcgtag ccgaaagctt tgagcgcggc
     7261 attttctgcg aacgtggatc cggtttcagc gacttcttcg atggttggaa agtcagccag
     7321 gctgaccagc gtaatcggta agtcgttaag taaggcacga atctctcgca gcttgccgtg
     7381 gttcccggta gccaccaaca gttctgtagg cttcaacgaa gtctctccgg agcgaacgct
     7441 gtaaagagcg accccaacaa tccgaacgat gatcgtgacg accactcaat cgcgtcacct
     7501 ttcatcatgg ttacgctgac ggagtggggc aatgatgcgg cgccttgctg aatgaccgca
     7561 gcgtttgtcg aaaacgccga ccgctcctgg gatgaaaaca gctcaacgaa tgaaatggct
     7621 gtcggcccgt ccggactgag ggtgagcgaa acgacgggaa gcgacacatc tattgtcgaa
     7681 cgagcgcgcg taaaagaacc gttagtcgcg atcgattgcc cgcgtgcctt tgcatcgaga
     7741 caacgtcgca cggcatctgc gggacccgtc aaaaaatatt cgccggcaaa tgcgaaactc
     7801 cagccgtcgg gaccggccaa aatctcggtg tcatcgaatt tctcggtttt cggctgacgt
     7861 cctaaacgct gctccgtaag cttgcgcagt gcaagtttgt cgaaggtttg cgcaattaac
     7921 actgcaggcg tgctggtatc gagccgcacc aactggagac gcgggccgat cgcggggaag
     7981 aaattatcgg gatcgctgat gccatatggc tcaagcagcg cttttaataa cggtcttgaa
     8041 gccaccgccg tcaacacatc tgaacgcgac gatacgaccg cattcaattc ccgccagaaa
     8101 ctcgctgggt ttcgcagctg ataagacgtg acggaaatcg cctcggctgg aacaaaggaa
     8161 aagtccagct tgtcacccgg cgggtccggt gtcagatcgt cagagagttg ctgacttata
     8221 ccttgtgcga gagcgactcg agattgatct tcggctcccg actgatccag ccgggacgtc
     8281 caggcgaacc catcaatcag gttaccgaat gcattcgaga taagcggcgc gatcgctgcg
     8341 gcatcggccg cgttgcctgc acgagcaaac gcccacgcct gaattaccgc tttgacccct
     8401 gccttcggca cgaagccaaa cactggcgcc tgcgagcctc gcagctgctg tttcatggtt
     8461 tgaagctgct ggttggtcgc cagtgatggc tgccggccgc ggcgaacttc aatacaccgc
     8521 agcacgaccg actcgtcgtt gcccacaatc gcaacggtgt cgacgaccgc gaggatgagt
     8581 tggcgagtgt tatctggcga cttccactcg acgagctcta cgccgtcaat ctgcttgcgc
     8641 gcgatgctta ctcctcggaa agaacgttgc gcaaactgac ctacgtgttt ttcaaccacc
     8701 cctttcatcc gacgctgcga tgtgtgcgtt tcaatgacta aggccgcgag cggtttaatt
     8761 gtgagggtgt tggcgctttc agtcgcctgc gcctgggtga aaaagagacc gaactgcgat
     8821 cgcgcgagca gcacagcctc tgccgaacca attcccgtcc agcgggcgag tttgatcgac
     8881 caactgtaag gaattagttg tgatggcgcg cccaaaggcg gcgccaatac ccgccaggcc
     8941 tcggttcctg tgatcccgtc tgcaacgtcc atcaggtcgt tgacttcgac gaaagcgagc
     9001 gactcggcgg ggacataggc gctcatctcc gttcttggcg tgctgttcca aaacagccag
     9061 gtcgccccga acgcgactaa aaccagcagt aatatcagcg ctttgcggta tcgttttagc
     9121 aagcgcgcat cgtaacccct ccacaccgcc cggacaaacc gatgcaccac gattaccacc
     9181 gttcgggacc gttacaataa gattggttaa acacggcaaa atgctgttga caatgtttca
     9241 acccgtactg tagtctccct atggcggttg agcaccgagt ctttcgacca ggttgctctt
     9301 gatctttcac ctccgccgac tctcgcggga acacccgcca aaccgagcgc cccgccttcg
     9361 caaagcgaag cctcaaaaaa caaagcattt gccgagagaa ccaatgaaga aagcaagcta
     9421 ttcctgccga atccgattag tccgcgcacg cttgtcgcgc gcccgtcgcg cacgcctccg
     9481 cttgcggcgt caacgccttt taacggtaaa actcgtaagg agtcacgcat gatgttcaaa
     9541 cgtggaaaga aaagcatggt gggcgttgac atcggctcaa gttcggtgaa ggccgtcgag
     9601 ctgcaaggta gaggtaaaga cctccaactg ctcagcctgg gttttgaggc tctggaggcc
     9661 gactcagtcg tcgacggaca aatcatcgag ttgaacgccg tctcgaacgc cattagcaac
     9721 atcttcaacg agcacaagat caaaacgacg caggttgcgg ccggcgtcaa cggtcactca
     9781 gtcatcgtaa agaatattgt gctgccgcag atgagcgatg gcgaacttca ggaatcgttc
     9841 gcgtggcatg ccgaagagca catccctttc gatatttccg atgtcaatct tgactatcac
     9901 gtcatggatc gatcaggcga tgcgattcac gtcctgatgg ccgcgtgcaa acgcgataag
     9961 gttgcgaacc tgaagcaaac gattcagctc gctggcaagc agcctacgat tatcgatgtc
    10021 gatgcgttcg cgcttcagaa ttgctacgaa ctgaactacg acccgcaacc gggacaggtg
    10081 gtagcgttgc tgaacattgg cgcttcgact acgaacatta acattctgaa cggcgttcgc
    10141 tcggtattta cgcgtgacgc gacgttcgga ggtaatcagt acacttccct gctccagaaa
    10201 gaattgggcc tcacgttcga tcaagccgaa agcgtgaagc gcggcatgcc tttacccgaa
    10261 ggcgctgaag tccgcgaggt tggcccgatc atggacacgg tctcagatat cctcgccctc
    10321 gaaattcaaa agacgatgga cttttaccgc gcgacggtcg aagacggcga ctccgcggtc
    10381 cagaagattc tcgtttcggg cggtggctca aaacttaccg gcctggcgga ttttctcgca
    10441 cggcggtttg aagtctcggt cgagatgttc gacccgttcc gcaaaattaa agttgatgct
    10501 cgcggtttcg atcccgacta catgcgcgag attgttcctg aaatggctat tgcagtcggc
    10561 ctggcgctga gaggagttga cgcgcggtga tcaaagttaa ccttttagat tcgattacag
    10621 atcgttcggt gggcgtagcc ttcgtcgaag acaaagtctc gagcgcgcgc acacagacgt
    10681 tcctggtggc attaaccgtg atggcgttgc tgatactcgg tgtcggctat gactatgtga
    10741 gcacgaaccg caagcatcag gatgcggtgc aggagcttga tcgtcagacg cgcatcaaca
    10801 cccagatgaa cgcggtgaag aaagagcaag gcgaacttga aaagaaaatc gccgacatca
    10861 atcttcgcgt gcaggccatt caaaaactgc gcgcatcgca gcaaggcccc agcgccgtgc
    10921 tcgaagaaat caaactccgc tttgacggcg ttcccggcct gtatttgagg agcgtcgaac
    10981 tgaaagagag cgagatcatc atcaagggtg agtcgccgaa cgaagccgcg gtgacacgct
    11041 tcggtcaaag catggaattc tcgtccggcc tgttcacaaa cctgaacatt gaaacggcca
    11101 gagaaatgct ggtgtcgaag agtgccggtg gcagttcttc caccgccgcg acggcagcgg
    11161 ccgactcggc cttgccgcag cccgaagtcg tggccttcac gattaaggcc acctacggac
    11221 aaaacaaaca gcagagttcg aatccggcgc ccaacggtca agtcgccaag aagtaacgca
    11281 ctgccgagga accaaacatg aaaatcggaa gcttaaacaa cattccctgg tacgccagac
    11341 tcagcatttt cgtcgcgctt gcggtcggtt tctacgccgg attctggtac ttcgtaaccc
    11401 gcggcaagcg ccaggaaacg aaggaactta ccgcaagaat cgaagtgctt aagaagcaga
    11461 atgtcgaagc gcagattgct tcgcagcgct tgagcgagtt ccgcacccag tacaagaaca
    11521 agcagcagga gctggacgag ttgcgggcgt tattgccgga acagcgcgag ctaacgaacg
    11581 tgctgcaggg cattcaggac cgcgcgaagg cgtcgagcct gcaagttcgc aagttcacac
    11641 cgaaagacga cgtgcagcag gatttctaca gcggcaagaa gatcgaggtg gccgtgcaga
    11701 gttcgttctc aggcctgcgc cagttctttg atcagatggc gaagtatcag cgcatcgtct
    11761 cgatcaccaa tttcgaaatc aagcagatgg acaagcagat ggcgaacaag actgtcgaag
    11821 cccgctttga tctgactgcc tactacgtct cgagcgagaa acttcagaag caggcgccgc
    11881 cgccaccgcc gcaaggcacg cagcccgcgc cgccggcacc cggaaaataa ccaccagttc
    11941 aactgattag gaacaataga aatgaactac gaacgcataa tcagactgag tttagccctc
    12001 gtcatcgccg ccacgacaat cactgcctcg gcagtgctgg tcagcgccca ggaagctacg
    12061 aaacctgagg cgcccgcaaa acagacaagg aagggcggcc gcgatccatt caagaaatac
    12121 cagcccccgg tgaggctggt taaggcaaca acgaaactcg atgcgccgcc gattcaagtt
    12181 cgcatcgagc gttatcgcgc gcagaaattg gcggccgcgg ccgcgcatgt gccgccgccg
    12241 aagccgacca cggcgctgct gattagcgag atgcaggtta ccggaatctt ccgcacgccg
    12301 cgcggttggg cggcgatgat cgaagcgact cccatcaaac tctcctacgt aatctatccc
    12361 ggcgaggcct tctttgacgg tcagctcgtc gcgattgaag aaggcagtct caccttccga
    12421 cgagacgtcg tttggctcga tggccgtcgt gaaaagagca ccgaagtaaa acagctgcgc
    12481 aagccgagtc cggtagaaga catgacggcc aaagcagctc ccgccaacgc cccggctacc
    12541 gaggctccca agccagccgc gccggaaaag caataacaag ttccggcagt caacaccgac
    12601 tgtcgtaatc cgtcgaatga ctaagccgtc ctggcccaat ggttcgattt tgacaactta
    12661 aatgactgaa ctatcgcttt agtgcggcgc gttcgaatgt tcgtacaggc atttcgaacc
    12721 aacgtgtagc ggtgagtgaa gtcgaatccc tgaggaggga ataatgccta agcagtctct
    12781 gaaacttaaa gtcgcgaaag catgcgccat cgcgtgcatc gttggaatgt cgggtaacac
    12841 gttcgtcgtg gccggcaaat ctatcgctat caaaagcgaa actgccgcgg tcgcgcggac
    12901 tgatttcagt cctcagccgc agccgacgcc gcccgcagat tctcctgcgg cgcagaatca
    12961 gacgaggcag tccgacgaag gccgccgcta cggtgcgccg ggctttctag gcgagccgat
    13021 caacctgaac gtcgtcaacg cggacattcg cgacatcctg aactacatca ctgagcagta
    13081 tggcatcaac tttgtcatcg acagctcagt cggcgccgtg ccggtgacgg tgaacgtgca
    13141 agacgtgccg tggaactatg cgctcgacgc tctgctgcga gcgaaccggc ttggtgtcga
    13201 agttaacggc aacatcctgc gcgtagcgac ttccgacata ctcgcaaagg aagccgaagt
    13261 tcagaagata atcagtgacg cgcggctcga taattcccct ctggttactg aattcgtgcg
    13321 tttgaattac gcgcgcgcct cgggcacgtt ggcccaggca gccggctcga ccgcgggata
    13381 ctccggtggt gccacgagca ccagctttag tggcggatcg ggcggtgatg cgactggcgg
    13441 cggcggcgat caaggactgc tgcctatcat caaacgccgt ctctcccgtc gtggcgcagt
    13501 cgaagtcgac ggccgcagta atactctgat catcaccgac gtcaaagaaa atattgaagc
    13561 cgtgcgccag ctcgtcgcca tcctcgacca gccggaaccg caggttgaga ttgaagtgcg
    13621 cgtaatcatt gcgcaacgca acttcagccg cgacctcggc gcgcaaatgt cgttgtcggt
    13681 tgccaatccg ctcagcggcg cagttggttc gttcagcacc ctgccccagc ccagcctggg
    13741 cggcggcaac tctggccaac aggacggcgt cgcgcctcgc aaccaggatc cgattcgcga
    13801 tgcgacgtcg agattcatgg ggccgttcca gccgaacgga aacctctcgg cagcgagtcc
    13861 caacaccgtg attggcttga ccaccggtct gttcgggaca gcccagattg gacttttgat
    13921 taccgccgcg gaaaatcgcg gtgaggccaa aactgtagcg acaccgcgcg tcactgctct
    13981 gaacaaccgt ccggcgcaga tcgaaagcgg cacccagatt ccggtgcaga cgactcaagc
    14041 taccggcggc ggcacgaccg tgacaaccac cttcgtgtcg gttccgctgc gcctgtcaat
    14101 caccccgcag attaccgatg ccggcacagt cgtgctgcgc gtcaccatcg aaaacaacac
    14161 cctcaacccg gcgattgcgg ttggcggcgt cccgggtatc gatacgcaac gcatgcagtc
    14221 cgaagtgctc gtgcccgacg gcggcaccac cgtcatgggt ggcgtgctcg cggacatcga
    14281 cagcaccagc cgacaccgga cgcctggcgc ggcttcgatt ccgattctcg gcaatctctt
    14341 caagcgcaag tccgtgatca agagttcgct cgagattctc ttcttcatca cgccgaagat
    14401 ttatcggcct gac
//
LOCUS       DATDBY010000506         2313 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_447191, whole genome shotgun sequence.
ACCESSION   DATDBY010000506 DATDBY010000000
VERSION     DATDBY010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447191"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1040)
                     /locus_tag="VIT19_09485"
     CDS             complement(<1..1040)
                     /locus_tag="VIT19_09485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEY5839254.1"
                     /translation="MQTFRKNTERKSDGVVIHISSMNDRSTEVVMGDRIMIGATDECD
                     VKIRLTEAAAAKATGPVIELARANGVYRIASYDSNLEVTLNGRPIRSNKAIDDGDEIW
                     IGPGGPSIHFFPIQANTSLVPGRRGGAHVAPFIEQAAMEASTSSRRDDAKIFLREFTR
                     ELVREINPSTKIIAFAILIALVIGSLYIGFGVVNELRRTRRINDDLRAQTEAAKAELE
                     RTNQQLKQLGESNNNIIRSLSLAAKLRADYGSGVALIYGSYMFVEAGTGRPLRYPESQ
                     ANESGNNIQSGSDSTTLTPEGNGAIAEYDFVGTGFHVGNGYLITNRHVVQPWDTDDRA
                     QSLNSTVRGQPRL"
     gene            1232..1675
                     /locus_tag="VIT19_09490"
     CDS             1232..1675
                     /locus_tag="VIT19_09490"
                     /inference="COORDINATES: protein motif:HMM:NF013426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S) ferredoxin domain-containing protein"
                     /protein_id="HEY5839255.1"
                     /translation="MAQSGFIENSERLRSLAPVTAAPLSHHVFVCTGKSCAARDSAAV
                     RDAFEHELKQRGILFGKEAKGKNPKGSIIVTECASVGFCSIGPTVLIYPDGVWYAQVQ
                     PKDVAEIIEEHLVNGRVVERLALMRVPSAPGAINDQPTNAEDWEA"
     gene            1840..2247
                     /locus_tag="VIT19_09495"
     CDS             1840..2247
                     /locus_tag="VIT19_09495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839256.1"
                     /translation="MPQKPFKAIGFGVLIWLVGFVWGSIVFMTPALKATSPIPYISNN
                     PAISFPILLIWIPLIYFLAKAYLSKVNDPDREGFKLGLIFAATNFILDLVVLVMLLKA
                     GAGYFAAASIWFAYTLLIIIPWLTGRSLQKALP"
BASE COUNT          476 a          640 c          661 g          536 t
ORIGIN      
        1 agacgcggct gtccgcgcac cgtgctgttc agactttgcg cgcgatcgtc ggtgtcccac
       61 ggttgtacga cgtgacggtt cgtgatcaag taaccgttgc ccacatgaaa acctgtgccg
      121 acgaaatcgt attccgcaat cgcgccgttg ccttcaggcg tcagcgtcgt cgagtctgaa
      181 cctgattgaa tattgttacc cgattcgttg gcctgtgatt ccggatatcg tagcggccgg
      241 ccggtgcctg cttcgacaaa catgtaggaa ccgtagatca gcgccacgcc acttccgtaa
      301 tcggcgcgca gcttcgccgc cagcgaaagg ctgcgaatga tgttgttgtt cgactcgccc
      361 agctgcttca gttgctggtt ggtgcgttca agctcggctt tcgccgcttc cgtttgcgcg
      421 cgcaggtcgt cattgattcg gcgcgtccgg cgcagctcgt tcaccactcc gaagccgatg
      481 tacagcgagc caattaccag agcgatcaga atggcgaagg cgattatttt cgtgcttggg
      541 tttatctcgc gcaccagttc gcgcgtgaac tcgcgcagaa agatcttggc gtcatcgcgg
      601 cgggacgaag tcgaagcttc catcgccgcc tgctcaatga agggcgcgac gtgcgctccg
      661 ccgcgccggc cgggcacgag cgatgtgttt gcctggatgg gaaaaaagtg gatcgaaggg
      721 ccaccgggtc cgatccaaat ttcgtcgccg tcgtcgatcg ccttgttcga tctgatcggg
      781 cggccgttaa gcgttacttc gagattcgaa tcgtagctgg cgatgcgata aacaccgttc
      841 gcgcgtgcca attcgatcac cggaccggtg gctttggctg ctgccgcctc agtcaggcga
      901 atcttcacgt cgcactcgtc cgtcgcgccg atcataattc gatcgcccat gacgacctca
      961 gtggagcgat cgttcatcga cgagatgtga atgaccacgc cgtcggactt gcgttcagtg
     1021 tttttgcgaa aagtctgcat ccgcttacta aatcaggcgt ccaccacccg tccccgccca
     1081 atatccgcgg cgtcggtcag tggtcgcctg tgtgcaaaag aatcttacaa tgaaaatagg
     1141 tgcacgcaaa gaacttagcc ccctggaaga cgcgcgcgga cgcgctgttt gccaaataaa
     1201 acggcgcaat cgttcgtggt aggatggtgc catggcgcaa agtgggttta tcgagaattc
     1261 tgaaaggctg cgctctctcg cgccggtgac ggccgcgcca ctcagccatc acgtgttcgt
     1321 ttgcaccggc aagtcctgtg cggcgcgcga cagtgcggcg gtgcgtgacg cttttgaaca
     1381 cgagttgaaa cagcggggaa ttctttttgg caaagaagcg aagggaaaga acccgaaggg
     1441 gagcatcatc gtcactgaat gcgcgtcggt tggcttttgc tcgatcgggc cgacggtttt
     1501 gatctatccg gatggggttt ggtacgcgca ggtacagcca aaggatgtag ccgaaattat
     1561 cgaggaacac ctggtaaacg ggcgcgtcgt tgagcgactc gcgttgatgc gagtgcccag
     1621 tgcgcccggg gccattaacg accagccgac aaatgccgaa gactgggaag cttagctgtc
     1681 taccgtgaag tcatcagtct tctctctgtg tctctgtgaa gtgctcggtg cctctgtggt
     1741 gaaatctgtc aacaataacc caccacggag caactgagat cacacagaga cacggagttg
     1801 ccgcctcgac agcggctagc gcacgttata tccacgcaga tgccgcaaaa acctttcaaa
     1861 gcgattggat tcggcgtcct gatttggctt gtcgggtttg tctggggcag catcgtcttc
     1921 atgacgccgg cgctgaaagc gacctcgccc attccctaca tttcaaacaa tccggcaatt
     1981 agtttcccca ttttgttaat ttggattccg ctgatctatt ttctggcgaa agcctacctg
     2041 tcgaaggtca acgatcccga tcgggaagga ttcaagcttg gcctgatctt cgcagcgacg
     2101 aatttcattc tcgacctggt tgtcctggta atgctcttga aggctggtgc aggctatttc
     2161 gccgcggcct ccatttggtt tgcttacact cttttgataa taattccatg gctcacgggc
     2221 cggtcgctgc aaaaggcgct gccgtgaggt tcattttgag aggacggata tggcttacac
     2281 acacaacgaa ctgaagcaca aaacagtcga cga
//
LOCUS       DATDBY010000507         2175 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2171242, whole genome shotgun sequence.
ACCESSION   DATDBY010000507 DATDBY010000000
VERSION     DATDBY010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2171242"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..955
                     /locus_tag="VIT19_09500"
     CDS             <1..955
                     /locus_tag="VIT19_09500"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY5839257.1"
                     /translation="AAVAFLQRKNNANAIANVAYSSLLYGKDHPYGRSLAGDEESLKA
                     LTRDDLQKFYDSYYRPNNSVLIVAGETDAKTLMPKLEKAFAAWKGASVTATAVPPAPR
                     FEHPGIYIVDRPGAAQSVVTIGQIGVDRSNPDYFSLLVMNSILGGQFSSRVNMNLRED
                     KGYTYGARSGWSFRRGAGPFSASADVQTAVTRESIQEFMKELNGIRGSIPVTQKELDY
                     NKQSIIRRYPGAFETVGQISNQLSNLVVFGLPDSYFNEYISKVNAVTVADINRVANKY
                     LDPSRMAILIVGDRKVIEPKLKELNGYTIAYLDVDGKRVAE"
     gene            1148..>2175
                     /locus_tag="VIT19_09505"
     CDS             1148..>2175
                     /locus_tag="VIT19_09505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839258.1"
                     /translation="MKFLKFRTAFLALALAIVCLGASSASPVLAQPASGLPPLIDREL
                     FFGDPEISGAQISPDGKFVAFVKPLKGTRNIWVKRTDEPFDKAKPITADTQRPIPQYF
                     WSRDGKYILFVQDKGGDENYLVYAVNPAETPAAGQEVPVARNLTDMKGVRAQIVGVPR
                     TDPDALYVSINDRDKAWHDLYKLKISTGEKTLVRENKDRIVGWTFDLKDQLRLATRVA
                     DNGDTEVLRLDEKGFTKVYSCNVFESCGPVRFHKDGKRVYFTTNKGANQDLAKLVLLD
                     PVTGKEEFVEQDPLNRVDFGNAAFSEVTDEIILTSYEDERERLYFKDKAIEADYKLLQ
                     KQLPGKDIG"
BASE COUNT          528 a          591 c          596 g          460 t
ORIGIN      
        1 ggcggcggtg gcttttctgc agcgcaaaaa caatgcgaac gcgattgcca acgtagctta
       61 cagttcactg ctttacggga aggatcatcc ctatggcaga tctttggcgg gcgatgaaga
      121 gtcgcttaag gcgctcacca gggacgacct gcaaaagttt tatgacagtt actatcggcc
      181 aaacaactca gtcttgattg tggctggaga aaccgatgcg aagacgttga tgccgaagct
      241 ggaaaaggct tttgcagcct ggaagggtgc cagtgtgacc gcaacggcgg ttccaccagc
      301 gccgcggttc gagcaccctg gaatctacat cgtcgaccgg cctggcgccg cgcagtcggt
      361 cgtaacgatc ggtcagatcg gagtggaccg gagcaacccc gattactttt ctctgttggt
      421 gatgaactcg atcctgggcg gacagttttc gtctcgtgta aacatgaacc tgcgggaaga
      481 caagggttac acctacggcg cgcgcagcgg gtggagtttc cgcagaggcg ccggaccgtt
      541 ttccgcctcg gccgacgttc agaccgctgt tacccgggaa tccattcagg agttcatgaa
      601 ggaactcaat ggcattcgcg gttcaattcc ggtgacgcag aaagagctcg attacaataa
      661 gcagagcatt attcggcgct atccgggtgc ttttgaaacc gtgggccaaa tctcgaatca
      721 gttgtccaac ctggttgtgt ttggactgcc ggatagttac ttcaacgaat acatctctaa
      781 ggtcaatgcc gtaactgtcg ccgacatcaa ccgggtagcg aacaagtacc tcgacccgtc
      841 caggatggcg attctgattg ttggcgaccg gaaggtaatc gaaccgaagt tgaaggaatt
      901 gaacggatac acgatcgcgt acctggatgt tgacggcaaa cgagtggccg aataggcagg
      961 aaacgtaaga gacaccgtac tttgtactta gtacttggtg cttggtgctg cggcttggtt
     1021 ttcaatacca agtacaaagc actaagtacc aagtacgcaa tcttctctga aaccgttctc
     1081 cccaactgtg cgtaatagtt tcttcgctca gtctctatat ctcaaccacc accgaaagag
     1141 gtaattaatg aagtttttga agttccgcac cgcctttttg gcgctggccc tggccatcgt
     1201 ttgcctcggc gcctcatcag catcccccgt tctggcgcag ccggcatccg gcctgccgcc
     1261 gctaatcgat cgcgaactat tcttcggcga ccccgaaatc tcgggcgcgc aaatctcacc
     1321 cgacggcaag ttcgtcgcgt tcgtcaagcc gctcaaaggc acacgcaaca tttgggtcaa
     1381 gcgcaccgac gagcctttcg ataaagcgaa gccgattacg gccgacacac agcggccaat
     1441 tccacagtac ttctggagcc gtgacggcaa gtacatcctg ttcgtccagg acaaaggcgg
     1501 cgacgagaac tatctcgtgt acgccgtcaa tcctgccgaa acgccggctg ccggtcagga
     1561 agttcccgtc gcgcgcaacc tgacggacat gaagggtgtt cgcgctcaaa tcgtgggcgt
     1621 gccgcgcacc gatccggacg cgctctacgt gtccatcaac gatcgagaca aagcctggca
     1681 cgatctctac aaattgaaga tctcaactgg agagaaaacc ctcgtccgcg aaaacaagga
     1741 tcgaatcgta ggctggacgt tcgatctcaa ggatcagctg cggctcgcca cgcgcgtggc
     1801 agacaacggc gacactgagg tgctgcgcct cgacgaaaag ggattcacga aagtttattc
     1861 ctgcaacgtg ttcgaaagct gtggaccggt tcgctttcac aaggatggca aacgcgtcta
     1921 tttcaccacc aacaaaggcg cgaatcagga cctggcgaaa ctagtgctgt tggatccggt
     1981 taccggtaaa gaagaattcg tcgagcagga tccgcttaac cgagtggatt tcggcaacgc
     2041 ggccttctcg gaagtcacgg acgagataat tctgacttct tacgaagacg agcgcgaacg
     2101 tttgtacttt aaggacaagg cgatcgaagc cgattacaaa ctgttgcaga agcaactgcc
     2161 cggcaaagac atcgg
//
LOCUS       DATDBY010000508         2140 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2307930, whole genome shotgun sequence.
ACCESSION   DATDBY010000508 DATDBY010000000
VERSION     DATDBY010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2307930"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            269..1126
                     /gene="dapF"
                     /locus_tag="VIT19_09510"
     CDS             269..1126
                     /gene="dapF"
                     /locus_tag="VIT19_09510"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEY5839259.1"
                     /translation="MPRFTKFHGFGNDYLVFEADQLANVADLGRFAHRICNRHYGAGG
                     DGIAVVAGSSDAKSDFNVRIFNPDGSEAGMSGNGTRCAAAYLHHHKLWSAEELCLQTR
                     NGIKRYYLLEHSGGAFTFRSELGQPKFDSASIPMTTDEPLEKVIDYPLTVGDETLKVT
                     ALQMGNPNCCVFVDDFKELDWRRLGPLIENHPQFPARTNVIFIRVRDRASIEERIWER
                     GVGETESSGTCSCAAMVASVINGKTGRAVDVHPPGGILPIEWRDDGEVVLTGRAELVY
                     NGDWLGPTT"
     gene            1195..1671
                     /locus_tag="VIT19_09515"
     CDS             1195..1671
                     /locus_tag="VIT19_09515"
                     /inference="COORDINATES: protein motif:HMM:NF024959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5839260.1"
                     /translation="MIVVCALACGGGLLGCGGKAAVEIKAGPVEKPKPPSAVPMWLGN
                     GERNFYGTGPWKDGELTVIWEVETGFISGRLHKDPWGGTSWPGQPSIKDNRVYFPSAD
                     GNVYCLDKDDGSVIWKFKGKDSFKATPAIFGDRIIASGLDHSIYCINANDGTLIWE"
     gene            1702..>2140
                     /locus_tag="VIT19_09520"
     CDS             1702..>2140
                     /locus_tag="VIT19_09520"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5839261.1"
                     /translation="MLVGDRLYFGAEDRNFYCLNFTDGSLVYKVPVGSVEGNITMKDG
                     RAYFSTEQGDLYCVDPADGRTIWKTRIGADSDSTPAVVNGLVYTAAEDGVVRAYKQDT
                     GELVWQYVTEGGRVGHASERNGIWASPIYYKDRIYIGAGNHHLY"
BASE COUNT          468 a          589 c          630 g          453 t
ORIGIN      
        1 cggcaaggag atgacgaagc tgggcttcat gtcatttgcg attgcgcacg agatgtatca
       61 tcgcgggcaa ctcaccgttt acgtgcgtct gctcggcatt gagccgatgc tgacgcagaa
      121 gtttcgcaag gcctttgggg cgtcgcctcc ataggccgaa aacccgatcg taaggcagaa
      181 acccgaccgt gagggagggt gcaagataac gtatcgcaga gcagcaccct ccctaacggt
      241 cgggtttctg catcacgccg tacttcagat gcctcgtttc acaaaatttc acggtttcgg
      301 caacgactat ttagttttcg aagccgatca gttggcgaac gtcgctgacc tgggtcgctt
      361 cgcgcatcgc atttgtaatc ggcattacgg cgccggcggc gacgggattg ccgtcgttgc
      421 gggttcgtcc gacgcgaaat ccgatttcaa cgttcgtatc ttcaatcccg acggcagtga
      481 agccggcatg tccggcaacg gcacgcgctg cgcagccgcg tacctgcacc atcacaagct
      541 ctggtcggct gaagagctgt gtctgcaaac gcggaatgga atcaagcgtt attatttgct
      601 cgaacactcc ggcggagcct ttacctttcg atcggaactc gggcagccga aattcgattc
      661 agcttcgatt cccatgacga cggacgaacc gttggagaag gtgattgact atcccctcac
      721 cgtcggtgac gaaacgctca aagtgacggc actgcaaatg ggcaatccga actgctgcgt
      781 cttcgtcgat gatttcaaag aacttgattg gcgacggctg ggaccgctga tcgagaacca
      841 tccgcaattt cctgcacgga ctaacgtcat attcattcgt gtgcgtgacc gcgccagcat
      901 tgaagagcgc atttgggagc ggggcgtggg cgaaaccgaa agttccggca cctgctcgtg
      961 cgcggccatg gtcgcgtcag tcatcaacgg aaagaccggc cgcgcggttg acgttcaccc
     1021 gccgggcggc atcttaccca tcgaatggcg cgacgacggc gaggtcgtgc tgacgggccg
     1081 agccgaactg gtttacaatg gcgactggct cgggccgaca acctagcctc gctgatttac
     1141 cgaggattcc ttctcttgcc acatctgaat tttcccctcc gtttttctcg actgatgatt
     1201 gtcgtctgcg cgctggcgtg cggcggcgga ttgttaggct gcggcggcaa agctgccgtg
     1261 gagatcaaag ccggtccggt cgagaaaccg aaacctccga gcgcggtgcc gatgtggctc
     1321 ggcaacggcg aacgtaattt ctacggcacc ggtccgtgga aagacggcga actgacagtc
     1381 atctgggaag ttgaaacggg cttcatctcc ggtcgtctgc acaaagatcc ctggggtggc
     1441 acgtcctggc cgggccaacc ttcgatcaaa gataatcgcg tttactttcc ttcggccgat
     1501 ggcaacgttt actgcctcga caaagatgac ggcagcgtca tctggaagtt caaaggcaaa
     1561 gacagcttca aagcgactcc ggcaatcttc ggcgacagga tcattgccag cggtctggat
     1621 catagtatct attgcatcaa cgcgaacgac ggcacgctga tttgggaata aaagactggc
     1681 ttcgaaatcg atggctcgac cgtgctggta ggcgatcggc tttacttcgg cgccgaagat
     1741 cgaaacttct attgtctgaa tttcacggac ggttctctcg tttacaaagt gccggtcggc
     1801 tcggtcgaag gcaacatcac gatgaaagac ggccgcgctt acttcagcac tgagcaaggc
     1861 gatctctact gcgtcgatcc ggccgacgga cgaacgattt ggaagacgag gattggcgct
     1921 gattccgatt caacaccggc agtcgtgaac ggcctggttt acacggcggc ggaagacggc
     1981 gtggtgcgcg cgtacaaaca ggacacgggc gagttggttt ggcagtacgt gactgaaggc
     2041 ggtcgcgttg gtcacgccag cgagagaaac ggaatctggg cgagcccgat ttactacaaa
     2101 gaccgcatct acatcggagc gggaaatcac catctctact
//
LOCUS       DATDBY010000509         2296 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1368055, whole genome shotgun sequence.
ACCESSION   DATDBY010000509 DATDBY010000000
VERSION     DATDBY010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2296
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1368055"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VIT19_09525"
     CDS             <1..368
                     /locus_tag="VIT19_09525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839262.1"
                     /translation="VQQPAPVATASQTTATTPTGSDTTDATTPTDGGVQTVSNVTPRR
                     SRAGSRVASEDHSLRPAGVIYQSDQAYVNAPSKPVEFALEDARGTKRKISLPPVSFGS
                     QSLVNNRVPVSYTGNSRVW"
     gene            376..2037
                     /locus_tag="VIT19_09530"
     CDS             376..2037
                     /locus_tag="VIT19_09530"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEY5839263.1"
                     /translation="MRSGLKSFVLFILTCVTTSLLCASVTAQTVQTPAPVAPTRPLTT
                     VEPAQQPSAKAQKSVRKPPQRPSRVTMVPDQEPVAPQIVTIVHRLSGVKLLRYLLRER
                     NEPGSIATIAPEAVNANAHASIIAGVALEDGKTIVARLPQVAAEMQIQRSSLLVPPDK
                     PDESRDPAARWRLPRPPSMQPDLTVITQDGKTFRARYIGVDGSTGLSVLQLTQPATTA
                     DISGAVHKKINDGQNVQLFAPERVATETPYTILVRIGKTDAKIAAKFAKAKADLESVM
                     VRATKLSPNVIGGVACDQAGNTLGIVDAVEGNDARLLTAEAMRAATKRVLEHQSSVPR
                     PLLGIRGEEIDLSAKKSLMAFGWNEQELEDLIDNEVGILLTFVLPGTPAAMAKLKPGD
                     VIVRVNGRDVKGAEEFSEMLTKVGSGEDVKFTVERPQLKQPLSVEVKLGGAFQPVFDF
                     QFEMPKVPRWTGGLKTLGIEAVTLSDKYYSQWGGSGVLVVGVEPESAAARAGLKERDV
                     IEMINGRVVGRGTWPFTYRFNSKEKHVLAVVRHKEKKQLVIEPVE"
     gene            complement(2043..>2296)
                     /locus_tag="VIT19_09535"
     CDS             complement(2043..>2296)
                     /locus_tag="VIT19_09535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839264.1"
                     /translation="RGAHPKDAGMTALKRIQANTIEKRLLNSRGLPSFGINFYILNAK
                     GEYAGVTMYQDVRAQFAICNDKGPQTLPCDGLLPGKPGD"
BASE COUNT          509 a          647 c          699 g          441 t
ORIGIN      
        1 cagtgcagca acctgcgccg gtagcgactg ccagccagac aactgccacg acgcccaccg
       61 gcagcgacac caccgacgcg accacgccga ctgatggagg cgttcagacc gtttcaaacg
      121 ttacgcctcg gaggagccga gcgggttctc gtgtggcgtc agaggatcac agtttgcggc
      181 cggccggggt tatctaccag agcgatcagg cttacgtgaa tgctccttcg aaaccggtcg
      241 agtttgcgct tgaagatgca cggggcacaa aacggaagat ttctttgcct ccggttagtt
      301 ttggctcgca aagtttggtg aataaccgcg tcccagtgag ttacacaggc aatagtcggg
      361 tttggtagta ctgaaatgag aagtggtttg aaatcatttg tgttgttcat cctgacctgt
      421 gtcacgacgt cgctattatg cgcgagcgtt acggcacaga ccgtgcagac gcccgcgccg
      481 gttgcaccaa cccggcccct gacaacagtt gaaccggctc agcagccgtc ggcaaaggcg
      541 cagaaaagcg ttcgcaagcc accgcagcgg ccttcgcggg tgacgatggt gccagatcag
      601 gaaccggtcg cgccgcagat cgtgacgatc gtgcatcgtc tgagtggtgt gaagttgctt
      661 cggtatctcc tgcgcgaacg aaacgaacca ggctcgatcg cgacgatcgc gccggaagcc
      721 gtcaacgcga acgcgcacgc cagcatcatc gccggggtgg cgctcgaaga tggaaagacc
      781 atcgtcgcgc gcctgccgca ggtcgccgcc gagatgcaga ttcagcgatc cagcctgctg
      841 gtgccgcctg ataaacctga tgagtcacga gaccccgccg cgcgctggcg tttgccgcgt
      901 cctccgagca tgcagcccga ccttacggtg ataacgcagg acggcaagac ctttcgcgcg
      961 cgctacatag gcgtggatgg ctcaacgggt ttgtcggtgc tgcaactcac gcagccggcg
     1021 acgaccgcag acatctcagg cgccgtacat aagaaaatta acgacggcca aaacgtgcag
     1081 ttgttcgctc ctgagcgggt agcgaccgag acgccctaca cgattctggt gcggatcggc
     1141 aagaccgacg cgaaaatagc cgccaaattt gcgaaggcca aagctgatct tgagagtgtt
     1201 atggtgcgcg ccacaaagct gtcgccgaat gtcatcggag gcgtcgcctg cgatcaggcc
     1261 ggtaacacac tggggattgt tgacgcggtc gaaggtaacg atgcgcggtt gttgacggct
     1321 gaggcaatgc gcgcagcgac aaaacgcgtg ctcgaacacc agtcgagtgt gccacgtcct
     1381 ttgttgggca ttcgaggtga agagatcgat ttgtcggcga agaaatcgct gatggccttc
     1441 ggctggaacg agcaagagct tgaagacctg atagacaacg aagtcggcat cctgctgact
     1501 tttgtgctgc ctggcacgcc ggccgcgatg gcgaagctca aaccgggcga cgtcatcgtg
     1561 cgcgttaacg gccgcgacgt gaagggtgcg gaagaatttt ccgagatgct gaccaaagtc
     1621 ggcagcggcg aggacgtgaa gttcaccgtc gaacgacctc agttgaagca gccactttca
     1681 gttgaagtga agcttggcgg cgcgtttcaa ccagtcttcg atttccaatt cgaaatgccg
     1741 aaagttccac gctggacggg cggcttgaag acgctcggca ttgaagcggt cacgctctca
     1801 gacaagtatt attcgcaatg gggcggctca ggcgttttgg ttgtcggcgt ggaaccggaa
     1861 agcgctgcgg cgcgcgccgg attaaaagag cgtgacgtga tcgagatgat caacggacgg
     1921 gtggtcggcc gcggcacctg gcccttcact tatcgcttca acagtaaaga gaagcacgtg
     1981 ctcgcagttg tccgacacaa agaaaagaaa cagctcgtga tcgaaccggt ggaataactg
     2041 gcctaatcgc ccggtttacc cggcaataaa ccatcacacg gcagcgtctg cgggcctttg
     2101 tcgttgcaaa tggcaaattg agcgcggaca tcctgataca tcgtcacgcc ggcgtactca
     2161 cctttcgcat tcagaatgta aaagttaatc ccgaagctcg gcagcccgcg actgttcagc
     2221 agacgcttct cgatcgtatt tgcctggatt cgcttcaacg ccgtcatgcc ggcatctttc
     2281 gggtgcgcgc cgcgcc
//
LOCUS       DATDBY010000510         3678 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_20538, whole genome shotgun sequence.
ACCESSION   DATDBY010000510 DATDBY010000000
VERSION     DATDBY010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3678
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20538"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1166)
                     /locus_tag="VIT19_09540"
     CDS             complement(<1..1166)
                     /locus_tag="VIT19_09540"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEY5839265.1"
                     /translation="MDDPASSLLALFAADAASGSSLIGIAIKFAAVLFFLLINAFFVG
                     AEFALIAVRRPRLEARAAAGNHRAASALRLLDNPTLFINASQLGITIASLVLGALGEP
                     AFAALIEPLALRVTPQPQAAYLAHLMAMVIALSLMTFLHMVLGELLPKMIALERAESL
                     ALFSSRTLEIFARLFRAPLWIFNRTGAGLARLFGLKSSLHHTAVYSEEELRQLVDISR
                     ESGHLRAEERRLIHRVFEFSDTLVREAMVPRTEMAAISIDCSLQDIRDAFQKHGYSRL
                     PVYDGKLDNVAGFIHSKDLMPFLLKPEAFQLEYVLQPPMYIVDTARLEAVLRQMQTAK
                     SHFGFVVDEHGGIEGIITLEDLLEEIVGDISDEHDEEVNEQITKVDDRTYLLDGA"
     gene            complement(1275..1829)
                     /locus_tag="VIT19_09545"
     CDS             complement(1275..1829)
                     /locus_tag="VIT19_09545"
                     /inference="COORDINATES: protein motif:HMM:NF044704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HEY5839266.1"
                     /translation="MGFKVGQKVVYPNHGIGTIEQIEQKQIGATALPFYTLRLAATNT
                     LVLVPVTNATEVGLRKPITTGECDTLFHTLSSNFAAPAHDWKDRFKDFSEKMRTGNIF
                     EVAEVLKHLNYLSHSKPLSFREQRMLERAHYLVVSELAAVCRQPECNIEPRVNDALAQ
                     ACLCHDGKSNGNGTLRRAAAAGAH"
     gene            complement(2036..3625)
                     /locus_tag="VIT19_09550"
     CDS             complement(2036..3625)
                     /locus_tag="VIT19_09550"
                     /inference="COORDINATES: protein motif:HMM:NF016190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM44-like domain-containing protein"
                     /protein_id="HEY5839267.1"
                     /translation="MKRFESGISNLKLIGDRLRSIRFTTRVVSFVFAAVMLAVFATEA
                     LARVGGGGGYGGGGGGGDGDGEGLGVIIYLIFRLLLWLTIEYPAIGIPLDIIVIGAII
                     YWFTRRSRKPASVVSSSPVLGLSTGPGGQPQPDIQRAFNQLRRFDPNFSEIIFTDFCY
                     ALYGRAHDARGKGQAALDDLSPYLSDAARGSLWQLNSPQLKAVQGIIVGAMQIADVRG
                     LTTPAVEVSVDFEANYTEFTPREGDPRGEMSYYVRERWELERKRDLLSPPPEEATALH
                     CPSCGAPLQKDTNGACAFCHTKVESGEFQWYVRSVRTLGREARGPLLTSNVPEVGTLN
                     PTIMQPNFPQVRAAFEHNNPTFKWAEFQARARMIFNELQEAWSSLNWERARPHETDNI
                     FQMHQYWIEAYRRQKLRNVLERYQITGMQPTKIKQDNFYQSVTLRIFAEGYDYTINEG
                     GHVVAGSRTNLRKWSEYWTFIRNSKATPAAARADLNCPNCGASLKVNATGICEFCGGK
                     MTSGEFDWVLSKIEQDESYVG"
BASE COUNT          838 a         1037 c         1036 g          767 t
ORIGIN      
        1 gcgccgtcga gcaaatacgt gcggtcatca accttcgtga tttgctcgtt gacctcctcg
       61 tcatgctcgt cagagatgtc gccaacgatc tcttccagca gatcctcaag cgtgatgatg
      121 ccttcaatcc cgccgtgttc gtccacgacg aagccgaagt gtgatttggc cgtctgcatt
      181 tgtcgcagca ccgcttccag gcgggccgtg tccacgatgt acatcggcgg ctgcaaaacg
      241 tattcgagct gaaatgcctc aggcttcagc agaaatggca tcaggtcctt gctgtgaatg
      301 aaacctgcga cgttgtccag tttcccgtca taaaccggca gccgcgaata accgtgcttc
      361 tggaaggcgt cgcgaatgtc ctgaagcgag caatcgattg agatcgcggc catctcagtg
      421 cgcggcacca tcgcttcgcg caccagggtg tcggaaaatt cgaagacacg atggatcaag
      481 cgccgttctt cggcacgcag gtgaccgctt tcgcgcgaga tatccaccaa ctggcgcagt
      541 tcttcctcac tgtagacggc cgtgtggtgc agtgacgact tcaatccgaa gaggcgcgcg
      601 agcccggcgc cggtgcgatt aaaaatccaa agcggcgcgc gaaacaatcg ggcaaaaatt
      661 tcaagcgtcc ttgaagaaaa taacgccagt gattcggcac gctcgagcgc gatcattttt
      721 ggcagcaatt cgcccagcac catgtgcagg aaggtcatca gtgataacgc gatcaccatt
      781 gccatgagat gggccaggta tgcagcttgc ggttgcgggg tgacgcgcag cgcaagtggt
      841 tcaatcaatg cggcgaaggc cggttcgcca agcgcaccca acaccaacga ggcaatggtg
      901 attcccagtt gcgatgcatt gatgaaaagc gtcggattgt cgagcaagcg aagcgccgag
      961 gcggcgcggt gattcccggc cgcggcgcgc gcttccaacc ggggacgacg cacggcaatt
     1021 aacgcaaact cagcgcccac gaaaaacgca tttatgagta ggaagaaaag aactgccgca
     1081 aatttgatcg ctatcccaat gaggctggag cccgaagcgg cgtcggcagc aaacaaggcg
     1141 agcaagctac tagcaggatc gtccatcgta atcgtaatca ggagtaaaag ttttccggca
     1201 tgatatcacg gcagaaaaaa gcgcgcagtc ggacacgtcc ggactgcgcg cttccatgaa
     1261 atcaacttca atgatcagtg agcgccggcc gcagccgcgc gccgcagggt gccgttgccg
     1321 ttggatttac catcgtggca caaacacgcc tgggccaagg catcatttac gcggggctcg
     1381 atgttgcact cgggttgacg gcaaacggcc gcgagttcag aaacgacgag gtaatgcgcg
     1441 cgctcaagca tccgctgctc gcggaacgaa aggggtttgc tgtgactaag atagttgaga
     1501 tgctttaaga cttcggcgac ttcaaaaata ttgccggtgc gcatcttctc ggaaaaatcc
     1561 ttaaaccgat ctttccaatc atgtgccggg gcggcaaagt ttgaactcaa cgtatggaaa
     1621 agcgtgtcgc attcgcctgt tgtaatcggt ttccgaagac cgacttccgt cgcgttggta
     1681 actggaacta atacgagggt attcgtagct gcgagccgga gcgtataaaa cgggagcgcg
     1741 gtcgcaccga tttgtttctg ctcgatttgc tcgatggtac cgataccgtg atttgggtaa
     1801 acaaccttct ggccgacctt gaagcccacc tttacacctc cagagtttga aacgtcacca
     1861 aggtaagtcg cattgcgcgg ctaggaaccg aaagttatgc gagacaataa accgatcggg
     1921 tgttctagaa ccgagttgtc cgtgaactga ctggagaata ccaaggccag ttgaggggcg
     1981 tcaagtatta cagctcaggt tgattggacc agagcaaaag ctgggccaaa accacttatc
     2041 cgacatagct ttcatcctgc tcaatcttcg aaagcaccca atcgaattcg cctgaagtca
     2101 ttttcccgcc gcagaattcg cagatcccgg tggcatttac cttcaacgac gcgccgcagt
     2161 tcggacagtt tagatcggcg cgggccgcgg ctggggtggc tttgctgttg cgaataaaag
     2221 tccagtactc actccactta cgcaaatttg ttcgcgagcc tgccaccacg tggccgcctt
     2281 cgttgatggt gtagtcatag ccttcggcga agatccgcag cgtgacggat tgataaaaat
     2341 tgtcctgctt gatcttcgtc ggctgcatcc ccgtgatttg ataccgctcg agcacattac
     2401 gaagtttctg gcgccggtag gcctcgatcc agtactggtg catctggaaa atgttgtccg
     2461 tctcgtgcgg tcgggcgcgc tcccaattca aagacgacca ggcttcctgc aattcgttga
     2521 agatcatgcg cgcgcgcgcc tggaactctg cccatttgaa ggtcggattg ttgtgctcga
     2581 aggccgcgcg cacctgggga aagttcggct gcatgattgt cgggttgagt gtcccgacct
     2641 caggaacgtt tgaggtgagg agcggtcccc tcgcttcgcg accaagcgtg cgcacgctac
     2701 gcacgtacca ttgaaactcg ccgctctcca ccttcgtgtg acagaacgcg cacgcgccgt
     2761 tcgtgtcttt ctgcaaaggc gcgccgcaac ttgggcagtg cagcgcggtc gcttcttcgg
     2821 gtggcggcga aagcaaatcg cgtttgcgct ccaactccca gcgctcgcga acgtagtagc
     2881 tcatctcgcc gcggggatcg ccttcgcgcg gcgtgaattc cgtgtagttc gcttcgaagt
     2941 cgacgctgac ttcaactgcc ggcgtcgtga gaccgcgcac gtcggcgatt tgcatcgccc
     3001 ccacgataat gccctgcacg gctttcagtt gcggcgagtt caattgccac agcgatccgc
     3061 gcgccgcgtc cgacaaatag ggcgacaggt catcgagcgc ggcctggcct ttaccccgcg
     3121 catcgtgtgc gcgtccgtaa agcgcgtaac agaaatcggt aaaaatgatt tccgaaaagt
     3181 taggatcaaa gcgtcggagt tggttgaagg cgcgctgaat gtccggctgt ggctgtccac
     3241 cgggcccggt tgataagccg agtactggcg aagaagaaac gaccgacgcc ggtttcctgg
     3301 aacgtctggt aaaccaatag atgatcgcgc cgattacgat gatatcgagc ggaattccaa
     3361 tcgcgggata ctcgatcgtc agccaaagca gtaaccggaa aatcagatag atgatgacgc
     3421 cgagaccttc accgtcgccg tcacctccgc ctccaccacc gccgtagccg ccgccaccgc
     3481 ccacacgcgc cagggcttcg gtggcgaaca ccgcgagcat cacggcggca aacacaaacg
     3541 acaccacgcg cgttgtgaag cgaattgatc tgagccggtc cccgatcaat ttcaaattcg
     3601 agattccaga ttcaaaacgc ttcatttcaa ttcgatgcgt gggccgtcaa ccagttcgtt
     3661 aggattttcg ccggtaca
//
LOCUS       DATDBY010000511         3903 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1677439, whole genome shotgun sequence.
ACCESSION   DATDBY010000511 DATDBY010000000
VERSION     DATDBY010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3903
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1677439"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2221
                     /locus_tag="VIT19_09555"
     CDS             <1..2221
                     /locus_tag="VIT19_09555"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5839268.1"
                     /translation="EVERRGDQRLFLPKLDWHVNDSNVLTVTYNRLRWNSPNGIQTQA
                     TNTRARDNFGDDLVDIDWLTTRLSSTLSSNLLNEFRFQWGRDNETQFSRAPQAGEPTN
                     SIDGRSPQTFITNGLSFGIPEFLDRPAFPDERRWQFANTTTWTQGKHSLKFGGDINFV
                     KDIINNLRFIGGEFSYTGGNAINDFIFDYTNFTTSGAIRALPAGAGFVGVCPRLATTT
                     AVAARIRAGQCYAGNFTQGIGPAGLTMKTTDFNFFIQDDWRITPRLTLNLGLRYEYQA
                     NPDAVAPNPALPQTANKVDDKNNFGPRVGFAFDMTGDGKTSLRGGWGLYYGRVINSTV
                     YSALTNTGLGPTISQQQLTIANNNLPPATGTCNGNPVNAQNCLPIYPNLLVPIGSSTT
                     NIVVRPAVQFFDDDFQLPQIHQGDLIFEREVGRNTVVSASYLFSFGNSLPTFVDTNLP
                     PPARTVTLNIVGGPLAGQNYITPIFVGPRPNTTYAQLTEIRSTIISKYHALVLQANRR
                     LTSGLQFQVNYTLSRAMDNGQGSQTFVANNSPFNAFDPEAEDALSNFDRRQKFVASLV
                     YNTDFAGLRDNVAGHIFNGWTIAPILNAFSGARVTGFISGGISPTAFGFSGSACTPGV
                     IPTATGCSTPGGGANGSGGANRFAGLPRNYFKQPNIWYVDLRLSRRFKITEGTKLEIL
                     GEAFNLFNRTQVTGVNSTVYNLSGTTLTANGTFLSTTAADSTLFRERQVQLAVRFEF"
     gene            2343..3329
                     /gene="queG"
                     /locus_tag="VIT19_09560"
     CDS             2343..3329
                     /gene="queG"
                     /locus_tag="VIT19_09560"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEY5839269.1"
                     /translation="MSVTPQHIPGDAKQRTNAIKAKALELGFQPVGIARADVLIEERQ
                     RLEEWLRRGFHGEMPYLARDPEQRTNLQKIFPEALSVVVVAMNYYTPHQHVEDGNVGR
                     VSRYAWGDDYHDVVAERLRELRNWIKQQWPEAEGKVCVDIQPVMDKAWAVRAGLGWMG
                     KHTNVITRDYGSWVFIGELLLNLELEYEEDQLADQCGSCTLCIDACPTSAIVEPYVVN
                     ANLCISHATIESRADTIRADVAERLDGWLYGCDVCQDVCPWNHTTPVSGETRFEPRDR
                     NVNASLVETLELTPESYAARFRGSAMKRAKLTGLQRNARALLENSAKNSSAP"
     gene            complement(3346..>3903)
                     /locus_tag="VIT19_09565"
     CDS             complement(3346..>3903)
                     /locus_tag="VIT19_09565"
                     /inference="COORDINATES: protein motif:HMM:NF013357.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 25 protein"
                     /protein_id="HEY5839270.1"
                     /translation="IHKATQGIGMFDSRYETNRQQAQAAGLLWGAYHFGTKANGAAQA
                     DFFLSKADADNQTLLVLDYEPNGNSTMTLDQARAFVLRVKAASGRFPGLYSGNLIKEQ
                     LGGQPADPILSQCFLWLAQYATQPNNIPGTWPSWTLWQYTDGVAGPNPHSVDGIGPCD
                     RNQFNGTVEQLQKLWGVAADAAGGN"
BASE COUNT          840 a         1110 c         1095 g          858 t
ORIGIN      
        1 cgaagttgag cgtcgcggcg atcaaaggct gttcctgccg aagctcgact ggcacgtgaa
       61 tgacagcaac gtcctaacgg tgacttataa ccgtctgcgt tggaattcgc cgaatggcat
      121 tcagacgcag gccaccaaca cgcgcgcgcg cgacaacttc ggcgatgact tagttgacat
      181 cgactggttg accacgcggc tcagctcaac gctttcgtca aacttgttga atgagttccg
      241 tttccagtgg ggacgcgata acgaaactca gtttagccgc gctcctcagg ccggcgagcc
      301 gacgaactcg atcgatggcc gctctccaca aacgttcatt acgaatggcc tgagcttcgg
      361 tatacctgaa ttcctcgatc ggccggcgtt tccggacgag cggcgctggc aattcgctaa
      421 caccacgacc tggacgcaag gtaaacattc gttgaagttc ggcggagaca tcaacttcgt
      481 taaggacatc atcaataacc ttcgttttat cggtggcgag ttcagctaca ccggcggtaa
      541 cgccatcaat gactttatct ttgactacac caacttcacg actagcggag ccatccgcgc
      601 tctgccggcc ggggccgggt tcgtcggcgt ctgcccgcgt ctagctacga cgaccgccgt
      661 cgccgcccga atccgcgcgg gtcagtgcta tgcgggcaat ttcactcagg gcatcgggcc
      721 ggccggtctg acgatgaaga ccacggattt caactttttc attcaggacg actggcggat
      781 tactccgcgc ctgacgctga acctcggttt gcgctacgag taccaggcga acccggatgc
      841 cgttgcgcct aacccggcgt taccgcaaac ggccaacaag gtggacgaca agaacaactt
      901 tggtccgcgc gtcggattcg cgttcgacat gacgggcgat ggtaagacgt cgctccgtgg
      961 cggctggggc ctgtactacg gtcgcgtgat caattccact gtttacagtg cgctcaccaa
     1021 cacgggtctt gggccaacta tttcacagca gcaattgacg atcgccaaca ataacctgcc
     1081 accggccacg ggcacatgta acggtaatcc agtcaacgcc caaaactgtc tgccgattta
     1141 tccgaacctg ctggtgccaa ttggctcgag tacaacgaac atcgttgtgc gtccggcggt
     1201 ccagttcttt gatgacgact tccagttgcc gcaaatccac cagggcgatc tcatcttcga
     1261 acgtgaggtt ggtcgcaaca cggttgtgtc ggcttcgtat ctgttcagct tcggaaattc
     1321 cctgccgacc tttgtcgaca cgaatttgcc gccgcccgcg cggacggtga cgctgaacat
     1381 cgtgggcgga ccattggccg gtcagaatta catcacgccg atcttcgtgg gcccccggcc
     1441 aaacacgact tacgcacaac tgacggaaat ccgcagcact atcatctcga agtatcacgc
     1501 gctggtgctt caggcgaatc gtcgtctgac gagcggcttg cagtttcagg tgaactacac
     1561 cttgtcgcgg gcgatggaca acggccaggg atcgcaaacg ttcgtcgcga acaatagtcc
     1621 gttcaatgcg ttcgatcctg aggcggaaga tgccctgtcg aattttgacc ggcgacagaa
     1681 gttcgtggcg agcctcgttt acaacacgga ctttgcaggc ttacgagaca acgtggctgg
     1741 acacattttc aacggctgga cgatcgctcc gattcttaat gcgttctctg gcgcgcgtgt
     1801 gactggcttc atcagcggcg gaattagtcc caccgccttc ggtttctcag gcagcgcgtg
     1861 tacacctggt gtgatcccga cagcaactgg ttgttccacg ccgggcgggg gagctaacgg
     1921 ttcgggcggc gcaaaccgct ttgcgggtct gccgcgcaac tacttcaaac agccgaacat
     1981 ttggtacgtt gacctgcgcc tctcgcgacg gttcaagatt accgaaggaa cgaagctgga
     2041 aattttgggc gaagcgttca atctcttcaa ccgcacgcaa gttacgggtg ttaacagcac
     2101 ggtctacaac ctttcgggta caacgttaac cgctaacggt acgttcctct cgacgaccgc
     2161 ggctgacagc acgctcttcc gcgagcggca ggttcagctt gccgtcaggt ttgagttcta
     2221 accaaaacta atcctttaca ctcaaggcgc gtctcgaaaa ggggcgcgcc ttttttttac
     2281 cgacagctcg tgtcacgctt aagaggtcgc cgctggtcga gttgctatac ttatcgaact
     2341 ctatgtcagt cactcctcag cacatcccag gcgatgcgaa gcagcgaacc aacgctatta
     2401 aggcgaaggc gctggaactc gggtttcagc ccgtgggaat cgctcgtgcc gacgttctga
     2461 tcgaagaacg tcaacggctc gaagagtggt tgcgccgcgg atttcacggc gagatgcctt
     2521 acctggcgcg tgatccagag cagcgaacca acctgcaaaa gatttttcct gaagcacttt
     2581 cagtcgtggt cgtcgcgatg aactactaca cgcctcatca gcatgttgag gacggcaacg
     2641 tcggtcgagt gtcccgctac gcctggggcg atgactatca cgatgtagtc gccgagagac
     2701 tccgcgaact ccgcaactgg atcaaacagc aatggccgga ggcggaaggt aaggtttgcg
     2761 tggatattca gcccgtcatg gacaaggcat gggctgtgcg cgcgggactt ggttggatgg
     2821 ggaaacacac gaacgtgatc acgcgcgact acggctcatg ggttttcatc ggcgagttgt
     2881 tactgaacct ggagcttgag tacgaagagg atcaacttgc ggatcaatgc ggcagttgca
     2941 ctctgtgcat cgatgcatgt ccaactagtg cgattgtcga gccgtacgta gtgaatgcga
     3001 atctttgcat ctcacatgca acgattgaat cacgcgccga cacgattcgt gctgatgtgg
     3061 ctgaacgcct ggacggctgg ctttacggct gtgacgtgtg tcaggacgtg tgtccctgga
     3121 accacacaac gcccgtatcg ggtgaaacgc gttttgagcc tcgcgacaga aacgttaatg
     3181 catcgctggt agagactctt gaactgacgc ccgaatccta cgcggctcgt tttcgaggga
     3241 gcgcgatgaa gcgcgctaag ctcacaggtt tacagagaaa tgcgcgggca ttgcttgaaa
     3301 actcagcgaa aaactcgtcc gcgccgtgag aagggcctct atgattcagt tgccaccggc
     3361 tgcgtcggcc gccactcccc aaagcttttg taattgctcg accgtgccgt tgaactgatt
     3421 gcggtcacat gggccaatac catcgaccga atgcggatta ggccccgcta caccgtccgt
     3481 gtattgccaa agcgtccagc tgggccacgt tcccggaatg ttatttggtt gggtggcata
     3541 ttgcgccagc caaagaaagc actgtgacaa gatcggatcc gcaggctggc cgcccaactg
     3601 ttctttaatc aagttgcctg agtagaggcc gggaaatctg ccgctggctg ctttcacacg
     3661 caaaacaaat gcgcgcgctt gatcgagcgt catcgttgaa ttgccgttag gttcgtagtc
     3721 cagtaccagc agcgtctggt tgtcggcgtc ggccttgctg aggaagaaat cggcctgcgc
     3781 tgcaccattg gctttcgtgc cgaaatgata ggcgccccac aacagtccgg cagcctgagc
     3841 ttgctgacga ttggtttcat accggctgtc gaacatcccg attccctgag tcgctttgtg
     3901 gat
//
LOCUS       DATDBY010000512         2882 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1587459, whole genome shotgun sequence.
ACCESSION   DATDBY010000512 DATDBY010000000
VERSION     DATDBY010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1587459"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..818)
                     /locus_tag="VIT19_09570"
     CDS             complement(<1..818)
                     /locus_tag="VIT19_09570"
                     /inference="COORDINATES: protein motif:HMM:NF013705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HEY5839271.1"
                     /translation="MAKEDYYKTLGVKRDAKPDEIKKAYRRLARKYHPDVNPGDKAAE
                     ERFKQMSEAFDVLSDPKKRTVYDRFGQYSDNLAEAAARGATPGSPYTRGAPPFDFSGF
                     DWGSTATGGGGSGSSFRDIFSDLFGGAKAEREPPRPQPQRGADIEMPLSLSFEEAITG
                     LTTNLTVNRSDQCSRCHGAGDTGGAVTTCSTCKGAGQVQRAGGRLRFTQECPDCGGTG
                     KARPPCSLCKGRGTLPKTETVKVRIPAGVDTGSRVRVPGKGAGGRLGAPPGDLF"
     gene            complement(906..2831)
                     /gene="dnaK"
                     /locus_tag="VIT19_09575"
     CDS             complement(906..2831)
                     /gene="dnaK"
                     /locus_tag="VIT19_09575"
                     /inference="COORDINATES: protein motif:HMM:NF001413.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEY5839272.1"
                     /translation="MSKIIGIDLGTTNSVVAVMEGGEPTVITNSEGGRTTPSVVAFAK
                     DGNRLVGQVAKRQAVTNPENTIYSIKRFMGRRFNEVSEEIKQHPYKVQGTGTGGDVRI
                     VAGGKEWSPPEISAMILQKMKQSAEDYLGQKVEKAVITVPAYFNDAQRQATKDAGKIA
                     GLEVMRIVNEPTAAALAYGLDKKKDETIAVFDFGGGTFDISILEVGEGVVEVKSTNGD
                     THLGGDDIDEALVDWIIDEFKKDQGIDLSKDKMALQRLKETAEKAKIELSSTMETEIN
                     LPFITADQSGPKHLVMKLTRARFEQLGEPLFKRLMGPVEQALKDAGVDAKKIDEVVLV
                     GGSTRIPKVSELVKNFFGKEPNRSVNPDEVVAVGAAVQAGVLSGEKTDILLLDVTPLS
                     LGIETLGGVATKLIERNTTIPTRKSEIFSTASDNQTSVEVHVLQGERPMAADNRTLGK
                     FHLIGIPPAPRGMPQIEVAFDIDANGIVNVSAKDMGTGREQKITITSSSGLGKDEIDK
                     MMRDAESHSTEDATKREEIEARNRLDGLVYQMEKTLNENREKVSAVAGEVETAIADAK
                     KAVEEGGVERMNNAFNALQTVSHKMAEALYQQTSSTPEGETTEQSSAAGASSTGQPGG
                     EDNVIDAEYVDVDEDKK"
BASE COUNT          508 a          888 c          790 g          696 t
ORIGIN      
        1 atgaaaagat cgcccggtgg tgcgcccaga cggccgcctg cacctttgcc aggcacgcgc
       61 acgcgcgaac cggtgtcaac gcccgcggga atgcgtactt tcaccgtttc agtcttcggc
      121 agagtgcctc tgcctttgca gagcgagcac ggcggacgag ctttccccgt gccgccgcaa
      181 tccggacact cttgcgtgaa gcgcagacga ccgccggctc gttgcacctg cccggcgcct
      241 ttgcaggtcg aacaagtggt taccgccccg cccgtgtcgc ccgcgccgtg acagcgtgaa
      301 cactggtccg atcgattgac cgtaagattg gtcgtaaggc cggtgatggc ttcttcaaaa
      361 ctgagcgaga gcggcatctc gatgtcggcg ccacgctgag gctgcggccg gggcggctcg
      421 cgttccgctt tcgcgccacc gaagagatcc gaaaagatgt cgcggaagct gctgcctgag
      481 ccgcctcccc cggtggccgt cgagccccag tcaaacccgg agaagtcaaa aggaggagcg
      541 ccgcgcgtgt agggggagcc gggagttgcg ccgcgcgcag ccgcctcggc cagattgtca
      601 gagtactgcc cgaagcgatc gtaaacagtc ctctttttgg gatcagagag aacgtcaaac
      661 gcctcactca tctgcttgaa gcgttcctcg gcggctttgt cgcccgggtt gacgtcaggg
      721 tggtacttgc gcgccagccg ccggtacgcc ttcttgattt cgtccggctt ggcgtcgcgc
      781 ttgacgccca gggtcttgta ataatcctct ttagccattt aaaagcagtg aatagtaaat
      841 ggtgacaggt aacaggaaag ttctagtcct gtcacctgtc acccatcacc tgttacctgc
      901 cttgcttact tcttgtcttc gtctacgtcc acgtactccg cgtcgatcac attgtcttcg
      961 ccgccgggtt ggccggttga cgatgcaccg gctgccgatg actgctcagt cgtttcacct
     1021 tccggagtgg atgacgtctg ttgataaaga gcttcggcca tcttgtgcga gaccgtctgc
     1081 agcgcattga acgcattgtt catccgctca acgccgcctt cttcaaccgc cttcttcgca
     1141 tcggcaattg ccgtttcgac ctcgccggcg accgcgctga ctttctcgcg gttctcgttc
     1201 agcgttttct ccatctgata aaccaaacca tcgagacgat tgcgcgcttc gatctcttca
     1261 cgcttcgtcg cgtcctcggt cgagtgtgat tcggcgtcgc gcatcatctt gtcgatttcg
     1321 tccttgccga gaccggagga cgaagtgatc gtgatcttct gctcgcggcc tgtgcccatg
     1381 tcttttgctg acacgttcac gatgccgttc gcgtcaatgt cgaaggccac ttcgatttgt
     1441 ggcatgccgc gcggtgccgg tggaatgccg atcaggtgga acttgccgag cgtgcgattg
     1501 tccgccgcca tcgggcgttc gccctgcaac acgtgaactt cgaccgacgt ctggttgtca
     1561 gaagccgtcg agaaaatttc cgacttgcgc gtgggaattg tcgtgttgcg ctcaataagt
     1621 ttcgtagcaa cgccgccgag ggtttcgatg ccgaggctga gcggcgtcac gtcgagcagc
     1681 aggatgtcgg tcttctcacc cgacagtact ccggcttgca ccgctgcgcc cacggcgacc
     1741 acttcatcgg ggtttacact tcgattgggc tctttgccga agaagttctt caccaactcc
     1801 gagactttcg gaatgcgggt cgagccgccg accagaacca cttcatcgat tttcttggca
     1861 tcgaccccgg cgtctttcaa agcctgctca accggaccca tcagacgctt gaagagtggc
     1921 tcgcctagct gctcgaaccg cgcccgcgtc agtttcatca ctaaatgttt cggtcccgac
     1981 tgatcggcgg tgatgaacgg aagattgatc tccgtctcca ttgtgctcga caactcaatc
     2041 ttggctttct cggctgtttc tttcagacgc tgcaaagcca tcttgtcttt ggacaagtcg
     2101 atgccctggt ccttcttgaa ctcgtcgatg atccaatcga ccagcgcttc atcaatgtca
     2161 tcgccgccca ggtgcgtgtc accgttcgtt gatttcactt cgacgacgcc ttcgccaacc
     2221 tcgagaatcg aaatgtcgaa ggtgccaccg ccaaagtcga acacggcgat ggtttcgtct
     2281 ttctttttgt cgaggccgta cgcgagcgcg gctgcggtcg gctcgttcac aatgcgcatc
     2341 acttccagtc cggcgatctt gccggcatcc ttggtcgcct ggcgctgcgc gtcgttaaaa
     2401 taggccggaa ccgtaatgac cgccttctcg accttctggc cgaggtagtc ttcggcagac
     2461 tgcttcattt tctgtaggat catcgccgag atttccggcg gactccattc tttgccgccc
     2521 gcgacaatac gcacatcgcc gccggtccca gttccctgga ctttgtaggg atgttgcttg
     2581 atttcttcgg acacttcgtt gaatcgccga cccatgaacc ttttgattga ataaatcgtg
     2641 ttttccgggt tggttacggc ttgacgcttg gccacctggc cgaccagccg gttgccatct
     2701 ttggcgaacg ccacgactga aggggttgtc cgaccgccct cagagttagt gattacggtc
     2761 ggctcgccgc cttccatgac cgccacgacc gagttggtcg ttcctaagtc gattcctatg
     2821 atcttgctca tcttaaacgc tccaaaaatt gattccgctc accgagacac ggggttaaat
     2881 gc
//
LOCUS       DATDBY010000513         4163 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1082910, whole genome shotgun sequence.
ACCESSION   DATDBY010000513 DATDBY010000000
VERSION     DATDBY010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4163
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1082910"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2974)
                     /locus_tag="VIT19_09580"
     CDS             complement(<1..2974)
                     /locus_tag="VIT19_09580"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEY5839273.1"
                     /translation="MHKSVTPGFAHLAKAFVIGLFVLAMAVGAYAQTQSTTGTIQGTV
                     LDEQGGAVPGATVEIKNLATNATRTLTTDDEGRFVALALQSGAYSVTITKQGFAISEA
                     PRVEVTVGQAVNLPVAMKVSGVEARVTISGAPTVDTVKTESSTTLNEKAVNNTPILGR
                     KFEDLLTLTPGVSITQGPDGDEINFNGQRGVFNNVTLDGGDYNNGFFGEQLGGQRAAI
                     DVPLDAVKEFQVVATGASAEFGRTAGGIINVISKSGTNDVHGSAFYFLRHENLSANTE
                     DGKPLKDFSRSQFGGTIGGPIQRDKAFFFLSFEGVREKLTRENLSVPLGTPCALTTPV
                     ITNPAHEAAIDASPDCQRVALLNFFRASRNQEEGLPTQHEINNNAFLGKLDWELNSAN
                     KLAASYNFDYSRNENQTFDVPTYGNSANGIEGPSKINNFNLNLFSTVSTTKLNEAHFS
                     YTREDRPRSAVTSNIPADTAMGFGTTFRFGHPFFLGPTVDELFWRTHLKDNFSIISGN
                     HNLKFGGEWVHSFNEQVFRGFFEGRYIFDSVTGFLHYATPGAPGSGFGPNAGRCTNGV
                     WTDLTLALPPCAGATTPLLLFLQGAGPNGPATDAAGASAIKNEDFALFVQDKWQVRPN
                     FTLNLGLRWEAQIFPEPTVAPSATAYGMFLSDPRFPSDGTLHSPKKQFQPRVGFAWDI
                     GSNGKSVLRASYGIYYGRQNMLSQVGSITTNGVQQQTIAGGLFANPTVRPTWPGLVTP
                     TASTCTAGGRTNPFPCFSGVRVFSRDYANPRIYTVNAAFEQELLTDLSLYFDFTHSKG
                     VHLTRFLDYARTGFFAPFLGETMVASAVGKASYQGFTVGMRKRFSKGYQFEWNYTLAK
                     DKDDDSNERDPFTDRSFNIFNLALDYAQSDRDIRHKFNFYMFAELPWGFEFVPRLQGR
                     TAQPATPATRTATNRNTLRKDNEFFSFDWRLSRRFTFGERYALIPTVEMFNTFNSKNR
                     INSLSGAGNQNSLTAPSLF"
     gene            3258..>4163
                     /locus_tag="VIT19_09585"
     CDS             3258..>4163
                     /locus_tag="VIT19_09585"
                     /inference="COORDINATES: protein motif:HMM:NF021355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller domain-containing protein"
                     /protein_id="HEY5839274.1"
                     /translation="MKPHIRPVRTFVISATSFLFTLAATLLVLTALAACTGTPTNTAA
                     AGNAKKTDKKTMRAFASEEELKAYFRKLAEERKQAARRNRAESSGLANTSPPPAPPAK
                     AAEAKAGAAKDEDSVTNTQHAGVDEGGIVKLHGDHLVVLRRGRLFTVAVGDNALKPIS
                     AVDAFGPEINPRSTWYDEMLVSDDTVVVIGYSYERGGTEVGLFNIDGAGNLSYRSTYH
                     LRSNDYYSSRNYASRLIGSKLIFYTPLYMNPYAEDPTVTFPAVRKWHKGATPQEFQRI
                     VSATRVYRPEREINPNSGLALHTVTV"
BASE COUNT          916 a         1150 c         1192 g          905 t
ORIGIN      
        1 cgaacaggct gggcgcggtt agtgaattct gatttccggc gcccgacagc gaattgattc
       61 tgttcttaga gttgaaagta ttgaacatct caacggtcgg gattaacgcg taacgctcgc
      121 caaacgtgaa ccgccgcgac agccgccaat caaacgagaa aaactcgttg tccttgcgga
      181 gcgtattgcg attggtagcc gtccgcgtcg cgggtgtagc cggttgcgcg gttcggcctt
      241 gaaggcgcgg aacgaattca aaaccccagg gcagttcggc gaacatgtag aaattgaact
      301 tgtgccggat gtcgcgatct gactgagcgt agtccaaagc caagttgaag atgttgaacg
      361 agcgatcggt aaacgggtcg cgctcgttag agtcgtcatc cttgtctttc gccagcgtat
      421 agttccattc gaactgataa cctttgctga accgcttcct catgccgacc gtaaagccct
      481 ggtaagacgc ctttcctacc gcgctcgcta ccatagtctc gcccaggaat ggcgcaaaga
      541 aaccggtacg cgcgtagtcg agaaagcggg tcagatggac gcccttcgag tgggtgaaat
      601 caaagtacaa cgatagatcg gttagcaatt cctgctcgaa cgcggcgttc accgtgtaga
      661 tgcgcggatt ggcgtaatcg cggctgaata cccgcacgcc agagaagcac gggaaaggat
      721 tcgtgcgccc cccagccgta catgtgctgg cggttggcgt cacgagtccg ggccaggtcg
      781 ggcggacagt ggggttggcg aaaaggccac cggcgatcgt ctgctgctgt acgccattgg
      841 tagtaatcga acctacctgc gaaagcatgt tttgcctgcc gtaataaatt ccataactgg
      901 cgcggaggac agactttccg ttgctgccga tgtcccaggc aaaccccacg cgcggctgaa
      961 actgcttctt cgggctatgc agcgttccat cggatggaaa tcgcggatca ctcagaaaca
     1021 ttccataagc agtcgcggac ggcgcgactg taggttcggg aaagatttgg gcttcccagc
     1081 gcaggcctaa gttaagcgtg aagttaggcc gaacctgcca tttgtcctgc acgaagagtg
     1141 cgaagtcttc attcttaatg gcagaagcgc cggcggcgtc ggtcgccgga ccgttggggc
     1201 ctgcgccctg gaggaagagc aacaatggcg tggtcgcccc tgcgcatggt ggcagggcta
     1261 aagttaagtc agtccaaacg ccattggtgc agcgaccggc attgggccca aaaccggatc
     1321 cgggagcgcc cggcgtcgcg tagtgtaaaa agcccgtcac gctatcaaag atgtagcgcc
     1381 cctcgaagaa cccgcggaag acttgctcgt taaacgaatg cacccactcg ccgccgaact
     1441 tgaggttatg gttacctgaa ataatcgaga agttgtcctt gaggtgggtt cgccaaaaca
     1501 actcgtccac agttgggccc agaaagaacg gatgaccgaa acggaaagtg gtcccaaatc
     1561 ccatggccgt gtccgccggg atgttcgaag taacggctga acgcggtctg tcctcgcgcg
     1621 tgtaggaaaa atgagcctcg ttgagctttg tcgtcgagac ggtactgaag agattcaagt
     1681 tgaagttgtt aatttttgac gggccttcaa tgccgttcgc cgagtttcca tatgtgggca
     1741 catcaaaagt ctgattctcg ttcctcgagt agtcgaagtt atacgaagcc gcaagcttgt
     1801 tcgccgagtt aagttcccaa tccagtttgc caagaaacgc gttgttgttg atttcgtgtt
     1861 gggtcggcag accttcttcc tgattacgac tggcgcggaa gaaattcagg agggctacgc
     1921 gttgacaatc cggactggcg tctatcgctg cctcgtgcgc cgggttagta atcaccggag
     1981 tcgtcaatgc gcacggcgtc cccagcggca cgctcaagtt ttcgcgggtg agtttttcgc
     2041 gcacaccttc gaacgagagg aaaaagaaag ccttgtccct ttgaatggga ccgccgatgg
     2101 tgccgccgaa ttgcgagcgg ctgaagtcct taagcggctt tccatcttca gtgttggcgc
     2161 ttagattctc gtggcgcaga aaatagaagg cacttccgtg aacgtcgttg gttcctgact
     2221 ttgagatgac attgataatc ccaccggcgg tgcggccgaa ctctgcggaa gcgccggtgg
     2281 ccacgacctg aaattcttta accgcatcga gaggcacatc gatggccgcg cgttggccgc
     2341 cgagctgctc gccaaaaaag ccattgttgt aatcgccgcc atcaagggtc acgttgttaa
     2401 aaacgcctcg ctggccgttg aagttaattt catcgccgtc cgggccctgg gtgatgctca
     2461 ctcccggagt cagggtcagc aggtcctcaa atttccttcc cagaatcgga gtgttgttga
     2521 cggctttttc attcaaggtc gtgcttgact ctgtcttcac tgtgtcaacg gttggcgcac
     2581 cgctgattgt gacgcgcgct tccactccgg aaactttcat cgccacgggc aggttgacgg
     2641 cctgaccgac cgtcacttca acccttggcg cctcggagat ggcgaagccc tgcttggtga
     2701 ttgtgaccga ataagcgccg gactgaagcg ccaacgccac gaaccgacct tcatcgtcag
     2761 ttgtcagggt gcgcgtggcg ttggtcgcga gattcttaat ctcgacggtc gcgccgggta
     2821 ccgctccgcc ttgttcatct aagacggttc cttgaatcgt tccggtggtg ctttgcgttt
     2881 gggcataggc accaactgcc attgctaata cgaacagacc gatgacgaag gcttttgcca
     2941 agtgggcaaa gccgggggta actgatttgt gcatgctctt ctccgtttcc gagttaggtt
     3001 ggatctgaca atctggatac cgattttctg ctgaaccctg cgaggaaacg acaattcagc
     3061 ggacgatctt caagtgtcga agcatgttag ttaagcacgt tcgtcgtgtc aatttttttg
     3121 tttgcgaaac ggcctggcat cccagcggac gcagaacacc caggccaaag cggacacttc
     3181 cgccgcaagt tttggaattc cgcccgttct tcaagcggtt gtaaatgatt acgcacccgc
     3241 aaggagagat cgaaacgatg aaaccgcata tccgacccgt ccggacattc gtaatttccg
     3301 cgacgtcatt tctgttcact ttggccgcga cactgctcgt gcttacggcg ctggccgctt
     3361 gtaccggcac gccgaccaac acagccgccg ccggcaacgc gaagaaaacc gacaaaaaga
     3421 cgatgcgtgc cttcgcgtca gaggaagagc tgaaggctta ctttcgaaaa ctcgcggagg
     3481 agcgaaagca ggcggcgcgg cgcaaccgcg ccgagtccag tggcctcgca aacacgtcgc
     3541 cgccgcccgc gccgcccgcc aaggccgccg aagcaaaggc cggagctgct aaagatgagg
     3601 actcggtcac gaacactcag cacgccggcg ttgacgaagg cggcattgtt aagctgcacg
     3661 gcgatcacct cgttgtgctg cgacgcggcc gtttgttcac agtcgccgtg ggcgataacg
     3721 ccctcaagcc gatctcggca gttgacgcgt tcggacctga gatcaatccc cgctccacct
     3781 ggtacgacga gatgctcgtg tcggatgaca cggtggtcgt aattggttac agctacgaac
     3841 gcggcggcac ggaagtcggt ctcttcaaca tcgacggagc gggaaatctt tcgtatcgat
     3901 caacgtatca cctgcgttcg aacgattact attcgtcacg caactatgcg agccgcttaa
     3961 ttggcagcaa gttgatcttc tacacgccgc tgtacatgaa tccgtacgcg gaagatccaa
     4021 ccgtcacgtt tccagccgtg cgcaagtggc ataagggcgc gaccccccag gaatttcagc
     4081 gaatcgtttc cgcgacgcgc gtctatcgtc ctgaacgtga aatcaatccg aattccggac
     4141 tcgcgctgca cacggtaacg gtt
//
LOCUS       DATDBY010000514         4889 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_655364, whole genome shotgun sequence.
ACCESSION   DATDBY010000514 DATDBY010000000
VERSION     DATDBY010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4889
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_655364"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="VIT19_09590"
     CDS             complement(<1..330)
                     /locus_tag="VIT19_09590"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEY5839275.1"
                     /translation="MTAVFKAEDRKRRAIWPMFGLVSVLLLATTASAQTPVANNSITA
                     PAKAGAATRASEHYRIGPGDVLDVRVFNKPQFSRDGVRVDGRGMIRMPFIDGEIQAAC
                     MTEQQLAD"
     gene            782..4522
                     /locus_tag="VIT19_09595"
     CDS             782..4522
                     /locus_tag="VIT19_09595"
                     /inference="COORDINATES: protein motif:HMM:NF014869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M4 family metallopeptidase"
                     /protein_id="HEY5839276.1"
                     /translation="MKKLTRSRAIALATLIVAAAALAIFGSTLLLSDSGAVTSAAPSQ
                     GIVEPADSAIATQAISALRLANSQIDARVSRKTGVYTLVRAQSGVLAASSALLSPEAR
                     ARAFLSTKGGVLGMTDTERALAATPGPASPLQLVRVFNDVLGGTHVKFDQRYHGLRVY
                     GAQVVVHMKSTGITAVSGDYVPAINAGTNPKVTAARAAEVALKQQIGAAPYTVASSEL
                     MIYRTGLLEGFRGQSRLAHAVTVTNGKANRDLIVIDALKGDILNRIALNPHALDRIIY
                     TPIYGDPFAVRHEGDPYTPGNPPGTTGADPLNNLYLFAGETYNLFSSAFGRDAYDGQG
                     HTMHSVLLANNNCPNAYWNSVSTNYCPDFDADDVVSHEWGHAYTEHTHGLIYSYQSGA
                     LNESYSDIFGETHDLHNGVDAEGGSNNAEPMPNGQRWQMGEDVNGFNQPALGILRDMW
                     DPTTFGQPDKVSSANYSCGSGDNGGVHGNSGVPNHAFAMLVDGKTFNGQNVQAIGFTR
                     ALAIYYRAMTVYQGPTSDFQFHALALNASCNDLIGAPLKNLSTSSATGVTSTDVITAT
                     TCQQVSKAMLAVEMSSPPPCPITILLDPDEPAACAGAADIFSENWEDGNMDGWTKNSA
                     GTFPEWEDASRPVRDFALDSTPPAPVVGNVAAAKAPAVGETGGGDCTPVAGTDYSGQF
                     SIDSPTITIPPGNDDVKLSFDHYVDSEGGVDGGQLELSVNGGAFQLVPESDYVFNYPK
                     TAYSLPPPAGNNTNPNPGEAAWTGANVGTPASAPRSSWGTTIVNLANLTNPGDTVKVR
                     FNWSQDGCNGTDGWYVDNIRVYNCSLLEAPTLSLGADYQNPDPNGSYTLNWTRPAGAT
                     GPDVLQESSVCAPLLTSDGSSLTGWTAAKDNEFAATWGTDSAKPQHAPNSAFKATPNE
                     QGFDSATLTYNSPIQIPATGITTLRFSQWYFNEDDDRGFVEVSTNGGTSWTPIYTNAR
                     SMGDLPDVGATAFADEGLTPQDLDLTIYSGQSIRLRFRYFQGESDFFFFVQYGWYIDD
                     ISITNDSWLDLTSADVISFLVSGRSDGTRCYRARTTYPSSIPSPYSNVVTAVTDIVCT
                     VQNVALSAAGSISSATSSHSSGLYPAGGAINGNHTGSDWNNGGGWNDGTRAEWPDTLE
                     VDFGQSRTIDEISVYTLQNDWLNAVEPTETTSASAEGILDFTVEYWNGSAWVNLASVT
                     GNDKAMRVFQFPQVTTTKIRVVVTAARNNWSRIVEVEAKGCN"
     gene            4609..>4889
                     /locus_tag="VIT19_09600"
     CDS             4609..>4889
                     /locus_tag="VIT19_09600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839277.1"
                     /translation="MKGKLIWFGVLLTVSVVSALPAVAKDPPRDVLGVRPNMSMNEAR
                     RRLNKIGRQQTAERMKHEVWEVKDSRISHVGIRFDSKTHVVRWVTAIARA"
BASE COUNT         1077 a         1420 c         1429 g          963 t
ORIGIN      
        1 gtcggccagc tgctgctcag tcatgcaggc cgcctggatt tcgccgtcga taaacggcat
       61 ccgaatcatc ccgcggccgt ccacccgcac gccgtcgcgc gaaaactgcg gcttgttgaa
      121 gacgcgaacg tccagaacat cgcccgggcc gattcggtaa tgttcgctgg cgcgggtagc
      181 cgcgcccgcc tttgccggcg cggtgatgct gttattggcg actggcgttt gagctgacgc
      241 cgtggttgcc aggagcagca ccgaaaccag cccaaacatg ggccaaatgg cccttcgttt
      301 tctgtcttct gctttgaaaa ctgctgtcat tgtcttgcct cccaaatgcc agtcgctggg
      361 gtgagtaaaa aattttgtgc gaacggccct cagattattg aaaacgcttg agaaatactt
      421 gagcgggact tgagcgggta ggccgtagcg cgtgagccgt tcttttgggc gggtttccgg
      481 ttggaaagcc ggtggttcga gtgtctggga gtcgagttgc gctggcgatc acgcggggaa
      541 atgaaatccg ttcgcaagct cgtcgcaaca cacgacgggg acgcgggcgc cgcgaccgtc
      601 taaaaaacct gaagtgacct aactcgcccg gctattccct caagtttttc tcaacccggc
      661 ttaattagtc tctcaccatc gcaagcacag atttcacaaa ttcgagtcca aagacgctgc
      721 acggttctct cgtgagccgt tccgctatgt ctgaattcaa caaaggatgg gaatgattcc
      781 gatgaaaaaa ctcacacgtt cacgcgcaat agctctggcg acattaatcg tggcagccgc
      841 cgcgctcgcc atttttggat ccacgctgct tttgtctgat agcggagcag taacctcggc
      901 ggcgccgtca caaggcatcg tcgagcccgc ggattccgcg atcgcgacgc aggcgataag
      961 tgctctgcgg ctggccaaca gccaaatcga tgcacgcgtc tcgcgcaaga ccggtgtgta
     1021 cacattggtg cgtgcccagt ctggcgtttt ggcggcgagc agtgctttgc tttcgccgga
     1081 agctcgtgcg cgggcattcc tcagcacgaa gggcggagtg ctcgggatga cagacaccga
     1141 gcgcgcgctt gcggctacgc cgggaccggc gagcccgttg cagcttgttc gtgttttcaa
     1201 cgatgtcctt ggcggcacgc acgtgaagtt cgatcagcgg tatcacggcc tcagggtgta
     1261 cggcgcgcaa gtcgtggtgc acatgaagtc gaccggaatc acagcggtca gcggcgatta
     1321 cgttcccgcg attaacgcgg gcaccaaccc gaaggtcacg gcggcgcgag cagccgaagt
     1381 ggcgttgaag cagcaaatcg gggcagcgcc gtacaccgtg gccagctcag agctaatgat
     1441 ttatcggacc ggcttgcttg aaggctttcg tggccagagc aggttggcgc atgcggtgac
     1501 ggtgaccaac ggtaaagcga accgcgattt aatcgtgatc gacgcgctga agggggacat
     1561 tcttaatcgt atcgccctga acccgcacgc tctcgatcgg attatctaca cgccaatcta
     1621 tggcgatcct ttcgccgtgc gccacgaagg cgatccctat acgcccggca atccgccggg
     1681 aacaactggc gctgatccac tcaacaatct ctacttattc gccggcgaga cctacaacct
     1741 ctttagctcg gcttttggac gtgatgctta cgatggccag gggcatacga tgcacagcgt
     1801 tttgctggcg aacaacaatt gccccaacgc ttactggaac agtgtctcaa ccaactactg
     1861 ccctgacttc gacgccgacg acgtggtatc gcacgagtgg ggtcatgctt atacagaaca
     1921 tacccacggc ttgatttatt cataccagtc gggcgcactc aatgaatcct actcagacat
     1981 attcggtgag acgcacgatt tgcataacgg cgtcgatgcc gaaggcggca gcaacaacgc
     2041 tgagccgatg ccgaatggcc agcgctggca aatgggcgag gacgtgaatg gcttcaacca
     2101 gcctgcgctc ggaattctgc gcgacatgtg ggacccaacc acgtttggcc aaccggacaa
     2161 agtcagttcc gcaaattact cctgcggttc gggagacaat gggggcgtac atggtaattc
     2221 gggcgtgccc aatcacgcgt tcgcgatgct ggtcgacggc aagactttta acggccagaa
     2281 cgtacaggcc attggcttta ctcgggccct ggccatctat taccgcgcaa tgacggtcta
     2341 tcaggggccg accagcgact tccagtttca cgctttggcc ttaaatgcat cgtgcaacga
     2401 tctgatcggc gcaccgctca agaacctctc taccagttcg gccactggcg tgacttccac
     2461 tgatgtaata acggcgacca cttgtcagca ggttagcaag gcgatgctgg cagtagagat
     2521 gagtagccca ccgccatgcc caataaccat tttgcttgat cccgacgagc cggcagcctg
     2581 cgctggcgca gccgatatct tcagcgagaa ttgggaagat ggaaacatgg atggctggac
     2641 caagaacagt gccggaactt ttccggaatg ggaagacgct tcgcggccgg taagagattt
     2701 cgcgcttgat tcgacaccgc cggccccagt tgtcggaaat gtcgccgcgg ccaaagcccc
     2761 ggcagtcggc gaaaccggtg gcggtgattg cactccggtc gcgggcacag attattccgg
     2821 ccagttctca atcgacagtc cgacaatcac gatcccacca gggaatgatg acgtgaaact
     2881 gagcttcgac cattacgtcg atagcgaagg aggcgtggac ggaggtcagt tggaactgag
     2941 cgtaaacggt ggggcattcc agctcgtgcc ggaatccgac tatgtattta actaccccaa
     3001 gactgcctac agcctgccgc cgcctgcggg caacaacacc aatcccaatc cgggtgaagc
     3061 ggcctggacc ggagctaacg tcggcacgcc ggcgtcggcg ccgagaagct catggggaac
     3121 gactatcgtt aaccttgcga acctaaccaa tcccggcgac accgtgaagg ttcgcttcaa
     3181 ctggagccag gatggttgta acggcaccga cggttggtac gtggacaaca tccgcgtgta
     3241 caactgctcc ctgcttgagg ctccaacact ctctctgggg gcggactatc agaacccgga
     3301 tccgaacggc agctacacgc tcaactggac tcgcccggca ggggcaaccg gaccggacgt
     3361 gcttcaggag tcgtccgtct gcgcaccact actgacgagc gatggcagca gccttacggg
     3421 atggacggcg gcgaaagata acgagttcgc cgcgacgtgg gggaccgaca gcgccaaacc
     3481 gcagcacgca cctaacagtg cctttaaggc gacaccaaac gagcagggct tcgattcggc
     3541 tacgctgact tacaacagcc cgattcagat acccgcaacc ggtatcacca cgttgagatt
     3601 ctctcaatgg tatttcaacg aggacgacga tcgaggcttc gttgaggtgt cgacgaatgg
     3661 cggaacgagt tggacgccaa tctacactaa cgcccgctcg atgggcgacc tgccggatgt
     3721 cggtgcgact gccttcgctg acgagggcct aacaccgcag gacctggatc tgacgatcta
     3781 cagtggacaa tcgattcgcc tgcgcttccg ctatttccag ggtgaatccg acttcttctt
     3841 ctttgtccaa tacggctggt acatcgatga catctcgatc accaacgata gctggctcga
     3901 cctgaccagc gccgatgtca tctcgtttct ggtgagcggc cggagtgacg gcacgcgctg
     3961 ttaccgagcc cgcaccacct atccgtccag cattccaagt ccgtacagca atgtggtaac
     4021 cgccgtgacg gacattgttt gcacggtgca gaacgtcgcg ctgtcggcgg cagggtcaat
     4081 ctcgagcgcg accagttcgc attcgagcgg cttgtacccg gcgggtggcg ccatcaatgg
     4141 caaccacaca gggtccgact ggaacaacgg cggcggctgg aacgacggca cgcgcgccga
     4201 atggccggac acgctcgaag tggacttcgg acagagccga acgatcgacg agattagtgt
     4261 ctacacactc cagaacgatt ggctaaacgc ggttgagcca accgaaacga cttcagcatc
     4321 agccgagggc atcctcgatt tcaccgttga gtactggaac ggttcagcct gggtgaacct
     4381 cgccagcgtc accggtaatg acaaagcgat gcgcgtcttc cagttcccgc aggtcacgac
     4441 gacgaagatt cgcgtcgtgg tcacagccgc gagaaacaat tggagccgca tcgtcgaagt
     4501 cgaggcgaaa ggctgtaact gagaaaggac gcattcggcc cacctggtta tcacgacccg
     4561 gtgggccgaa agcgcttttc agattcttga acggagaagc cattgattat gaagggtaag
     4621 ttgatctggt ttggtgtcct gctcacggtt tccgtcgtga gcgcattacc tgcggtcgct
     4681 aaagatccgc cccgcgatgt gctcggcgtt cgccccaaca tgagcatgaa cgaggcgcgc
     4741 cgccgattga acaagatcgg tcgccagcag acagccgaga gaatgaaaca tgaagtgtgg
     4801 gaggtgaagg acagccgcat ctctcatgtc ggcataaggt tcgacagcaa gacacacgtc
     4861 gtgcgctggg tcaccgcaat tgcgcgggc
//
LOCUS       DATDBY010000515         3228 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1318121, whole genome shotgun sequence.
ACCESSION   DATDBY010000515 DATDBY010000000
VERSION     DATDBY010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3228
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1318121"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..577
                     /locus_tag="VIT19_09605"
     CDS             <1..577
                     /locus_tag="VIT19_09605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839278.1"
                     /translation="RHMKYFTYELIAASNGWIEQDKRAVNRATKRMETAVRQYQQELE
                     SLKTRISQPAWKFFRYGFEDKGLHDARLLSFQIGDGLDYKPDGKAPFRLNAQRTSVEL
                     EFLNYEQDLHYLFQLRGISSVSCNLFREEHSYAKSIGDLYIYELTQADKDNLRLGFLF
                     ASGATIVAEFQRLVFRMTRLQRRYEIGEMYD"
     gene            610..1161
                     /locus_tag="VIT19_09610"
     CDS             610..1161
                     /locus_tag="VIT19_09610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839279.1"
                     /translation="MKNDLVTGGAGIFEFMRRSRIFFHPLFVLTCAAGAMAMYAATMK
                     WRFAGGDLRGHFMYVLPIIVPFVAFLFDRAAQLRTAGWPEWVIDFTVIAASILRALGV
                     IPLISGHALFLTYAIARPGSRLTKITALVVMVQVLYLKIFVWNDTVTPFTGIAAGLTA
                     ALIVRGLGARMNTRPLQALPNSE"
     gene            1158..2123
                     /locus_tag="VIT19_09615"
     CDS             1158..2123
                     /locus_tag="VIT19_09615"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEY5839280.1"
                     /translation="MKNILVTGGAGFIGSHLVERLLGEGDWRITVIDDFNNFYSPAIK
                     RENVGPHLSNPNFKLIEADIRDANALASAFDDTKYDCIVHLAARAGVRPSLKEPRLYV
                     ETNVNGTVNLLELARGHGVKQLVFGSSSSVYGVNPKVPFSEDDPIFNPISPYAATKAA
                     GELICHAYSHLYDMRIVCLRFFTVYGARQRPDLAIHKFAKLISEGKSIPVFGDGTTRR
                     DYTYVDDIIAGVRAAIDYDGTNYEVINLGESRTVELRELISLIETELGTRAQIDWQPP
                     QPGDVPQTFADISKARKLLRYDPQTQIEAGIQRFVEWFTQNHARR"
     gene            2166..2999
                     /locus_tag="VIT19_09620"
     CDS             2166..2999
                     /locus_tag="VIT19_09620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839281.1"
                     /translation="MKRCPTCKRTYHDDSLNFCLEDGTSLSLWPDKTLVLPGAEQSNL
                     APTGVSGQPEDAYGRQPAEPTLTVNQNAQAHLPQQGVGPAQPYYAQGYAAPPRKRSAA
                     LWLIPITAIALLAIAAIVYSMSGRQSAGNAGSSDNSSSRGTSTSSVKTASPTPTPPEF
                     GFIKGKMAYPSEGIPGGMVACAENIETKETICSQKRKDWEEGVSYNLRLPPGKYYVYG
                     KLLPGDDSAGDLQNERAYYTDYMKCGMGATCTSHRRIQLEVRPDETLNGITVGDWWAN
                     L"
BASE COUNT          765 a          843 c          870 g          750 t
ORIGIN      
        1 taggcacatg aagtatttca cttacgagtt gatagcggcg tccaatggct ggattgagca
       61 agataaacgg gccgtgaacc gggccacaaa gcgcatggag acagccgttc gtcagtatca
      121 acaggaactg gaaagcctta agacgcgaat aagccagccg gcatggaaat tctttcgata
      181 cggattcgag gacaaagggc ttcacgacgc gcgactgctt tcgtttcaaa taggcgacgg
      241 acttgattat aagcctgacg gtaaagcacc ttttcgatta aacgcacagc gaacgtcggt
      301 cgagctcgaa tttctcaact acgaacagga tttgcactat ctgtttcaac tgcgaggaat
      361 atcatcggtt agctgtaatc tctttcgcga agagcactcg tacgcaaaga gcataggcga
      421 cctatacatc tacgagctaa ctcaagctga caaagacaat ctgagattgg gcttcctgtt
      481 tgcgtcaggc gcgacgattg ttgctgagtt tcagagatta gtttttcgaa tgacgcgact
      541 acagcgtcgt tatgaaatag gtgagatgta tgactaagtt cgtcaccatc tcaatccgat
      601 tacattccta tgaagaatga tctggtcact ggcggcgcag gcatctttga atttatgcga
      661 cgaagtagaa tctttttcca tccgctgttt gttttgactt gcgccgcggg ggcgatggcg
      721 atgtacgccg cgacgatgaa gtggcgattt gcggggggcg atctgcgggg ccatttcatg
      781 tacgtgcttc ccatcatcgt gccgtttgtc gctttcctgt tcgaccgtgc cgctcaactc
      841 cgaacggcgg gatggccaga atgggtaata gacttcacgg taattgcagc gtcgattctg
      901 cgtgcactcg gcgtaattcc tttgatttcc ggccatgctc tgtttctgac ctatgcgata
      961 gcccggccag ggtcgcggct aacgaaaatc accgcgctcg tggtcatggt gcaggttctc
     1021 tatctgaaga tctttgtctg gaatgacacg gtgacgccct ttactggaat tgccgcggga
     1081 cttacggcgg cattaatagt ccgcgggctg ggcgctcgaa tgaatactcg gcctctgcaa
     1141 gctttaccga atagcgaatg aaaaacattc tggtcactgg cggcgcaggc ttcatcggat
     1201 cgcacctggt cgagcgattg ctcggcgagg gcgattggcg aatcacagtc atagacgact
     1261 tcaacaactt ctactcgccc gcaatcaaac gcgagaacgt gggcccgcat ctttcgaatc
     1321 cgaacttcaa gttgattgaa gctgacattc gcgatgcgaa tgcgctcgcg tcggcatttg
     1381 acgacacaaa gtacgattgc attgtgcatc ttgcggcgcg cgccggcgtt cgtccgtctt
     1441 tgaaagaacc gcgtttgtac gtcgagacta acgttaatgg cacggtgaat ctgctcgaac
     1501 tggctcgagg tcatggggtg aagcagcttg tgttcggatc atcgtcctcc gtttacggcg
     1561 tgaacccgaa agttccgttc agcgaagacg atccaatttt caatccgatc tcgccgtatg
     1621 ccgcgacgaa agcggcgggc gagttgatct gtcatgctta ctcgcatctg tacgacatgc
     1681 gaattgtctg cctgcgattc tttaccgttt atggtgcgcg ccagcggcct gacctggcga
     1741 ttcacaaatt cgctaagctg attagtgaag gaaaatcaat acccgttttc ggcgacggca
     1801 ccacacgccg cgattacaca tacgttgatg acatcatcgc cggcgttcgc gcggcgattg
     1861 attacgacgg aactaactac gaggtcatta acctcggcga atcgcgcacg gtggaattgc
     1921 gcgaactgat ctcgttgatt gaaacggagc ttggcacgcg tgcccagatt gattggcagc
     1981 caccacagcc cggcgacgtg ccgcaaacat tcgcggacat ttcaaaggcg cgtaaactgc
     2041 tccggtacga cccccagaca caaatcgaag ccggcattca aaggtttgtt gagtggttta
     2101 cgcaaaacca cgctcggcgc taacttcggc tattttgagt gagtcgccct ttctggtgtt
     2161 cgataatgaa gagatgcccg acctgcaagc gcacttatca tgacgatagc cttaacttct
     2221 gtttggagga cggcacgtct ctttcccttt ggccggacaa gactttagtt ctgccgggcg
     2281 ctgagcagag caaccttgcg cctactggcg tctcagggca gccggaggac gcttacggca
     2341 gacagccggc tgagccgaca cttactgtca accagaatgc acaagcacat ttacctcaac
     2401 agggagtcgg gcctgctcaa ccatactacg cgcagggcta cgcggcgccg ccacgcaaga
     2461 gaagcgctgc tctctggcta attcccataa ccgcgattgc tcttctcgca atcgcagcta
     2521 tcgtctattc gatgtctgga agacaaagtg ctggcaatgc aggcagtagc gacaattctt
     2581 cgtcgcgcgg aacatcaaca tcctcagtta agacagcttc gcccactcca acgccgcctg
     2641 agttcggatt tatcaaaggg aagatggcct atccgagcga aggcattccg ggcggcatgg
     2701 tcgcctgcgc tgagaacata gagacgaaag aaacgatctg ttctcaaaag cgtaaggact
     2761 gggaggaggg ggtcagctac aacctgcggc ttccgcccgg aaagtactat gtgtatggaa
     2821 agcttctgcc cggcgacgat tctgctggtg acttgcagaa cgaacgcgcc tactacacgg
     2881 attacatgaa atgcgggatg ggagcgacct gcacatcgca tagacgcatt caactggaag
     2941 tgcgcccaga cgagactctt aatggaataa ctgtgggaga ctggtgggcc aacctttagg
     3001 ttctgctaga gatttagaac tagcgcgtgc gcactacctc cagggctcgc cagtcgtaaa
     3061 catgtgctca atcaaagccg tctggatcta aagctcttta tgggcgaaat atcattgacc
     3121 cgccatgcaa tcccgcgcca ttcagtttaa aatgcgacgg ttcaaaggag ttgcatttga
     3181 ttacgactga attcaaagcg ccgccacgtc tggccgaatc ctcgcagg
//
LOCUS       DATDBY010000516         2312 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2880327, whole genome shotgun sequence.
ACCESSION   DATDBY010000516 DATDBY010000000
VERSION     DATDBY010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2312
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2880327"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..660
                     /locus_tag="VIT19_09625"
     CDS             <1..660
                     /locus_tag="VIT19_09625"
                     /inference="COORDINATES: protein motif:HMM:NF014027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HEY5839282.1"
                     /translation="VLERERKLGIKNKSLLAAAHEHAVPLYTSSPGDSSIGMNVAAKA
                     LQGNKLAFDPSLDVNETASIVLAAKRGFIRDRVSTRSGGDGIKSSSKKKSGGKSAIFI
                     LGGGSPKNFALQTEPQIQEVLGIDERGHDYFLQVTDARPDTGGLSGATPGEAVSWGKV
                     DPDRLPDAVVCYLDSTVALPIITAYALAKHKPRPPRRLYDRREEFMDLLLREYKRSTR
                     R"
     gene            728..1135
                     /locus_tag="VIT19_09630"
     CDS             728..1135
                     /locus_tag="VIT19_09630"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HEY5839283.1"
                     /translation="MSEIKTVPNRSYYNCSSCPAYCCAIYERVQVTPRDIKRLARHFT
                     VDYATAEKRFTTTWQGERILRRKSDPILGEACKMLDLETRRCTIYDARPLTCREFPAR
                     KRCAYYDLLTFERSQQNDRTVLPLVQITFRDED"
     gene            1177..1392
                     /locus_tag="VIT19_09635"
     CDS             1177..1392
                     /locus_tag="VIT19_09635"
                     /inference="COORDINATES: protein motif:HMM:NF041655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MM0924 family protein"
                     /protein_id="HEY5839284.1"
                     /translation="MEKLLAKLIGREVDVICSGTSALRGECVSVENGVLQLKNDEGEV
                     FYIAVDKIIAVWEKKDKSRHPGFVFKT"
     gene            1413..1844
                     /locus_tag="VIT19_09640"
     CDS             1413..1844
                     /locus_tag="VIT19_09640"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEY5839285.1"
                     /translation="MALIGDASKGRIAAFIIDNLLACVVSLLAVAALDTDNPVIAGPT
                     LCLAYLGYFFLFESALSTTPGKFLHGLVVRKIDGTKCGVREHAIRALVRMFEANPLLF
                     GGLPAGMAIFASERKQRIGDSLAGTVVISKKALAAESEPIN"
     gene            complement(1901..>2312)
                     /locus_tag="VIT19_09645"
     CDS             complement(1901..>2312)
                     /locus_tag="VIT19_09645"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEY5839286.1"
                     /translation="IESHMGAPYRFNTTGPNTFDCSGLVWRTFNEIGVNFTRGPARSY
                     WAVFEAPPVEEQFKAGTLVFFSGLAHVGIVADEKGFYHASRSKGVIYSPFSEYWLSRI
                     DGFRRVPSEGLQPIAMKRQTKPAVVNISDEGAPR"
BASE COUNT          526 a          622 c          660 g          504 t
ORIGIN      
        1 gtgctggaac gcgaacgaaa gctggggatc aagaacaaat cgttactggc ggcggcgcac
       61 gaacacgcag tgccgctcta cacttcatct cccggcgatt cgtcgattgg catgaacgtc
      121 gcggcgaagg ctttacaagg caacaagctc gctttcgatc cttcgctgga cgtgaatgaa
      181 accgcatcga ttgtgctggc ggcgaagcgc ggattcattc gcgatcgtgt cagtacccgg
      241 agcggtggcg acgggatcaa aagctcaagt aagaagaaat ccggaggcaa gtcggccatc
      301 ttcattcttg gcggcggctc gccaaagaat tttgctttgc aaaccgaacc gcagattcag
      361 gaagtcttgg gcatcgatga gcgcggtcac gattatttcc tgcaagtcac cgacgcgcgt
      421 ccggacacgg gcggtctttc cggtgccacg ccgggcgaag ccgtctcatg gggcaaagtc
      481 gatcctgatc gtttgcccga tgcggtagtt tgttaccttg attcaacagt ggcgcttccg
      541 attattacgg cgtacgctct ggcgaagcac aagccgcggc cgccacgacg cttgtacgac
      601 cggcgtgaag agttcatgga tttgcttttg cgagagtaca aacgatcgac aaggcgatga
      661 ggtcagtacc acctgcggta gcgggtgggt cagagggacc atgcgaaaca acggacgcct
      721 aaagcctttg agcgaaatca aaacggtccc gaatcgcagc tactacaact gttcaagttg
      781 cccggcgtac tgttgcgcga tctacgagcg cgtccaggtg acgccgcgcg acattaagcg
      841 gctggcgcgg cacttcaccg tcgattacgc gaccgcggaa aagcggttca cgaccacttg
      901 gcaaggcgag cgcatcctgc gccgcaaatc agatccgatc cttggagaag cttgtaagat
      961 gcttgatctg gaaacgcgcc gctgcacgat ttacgacgcg cgcccgctga cctgtcgcga
     1021 gtttcccgcg cgcaaacgtt gcgcctacta tgacctgctg actttcgaac gtagccagca
     1081 gaacgaccgg acggttctgc cgttggtgca gattaccttt cgtgacgaag actgagtcag
     1141 aatcccgatt tatcgggata gcgtcgggac gataaaatgg aaaaacttct cgcaaaactg
     1201 atcggacgcg aagtcgatgt tatttgttca ggcacctcag ccctgcgcgg cgaatgtgtg
     1261 agcgtggaaa acggcgtgct gcagttgaaa aatgacgagg gcgaggtttt ttacatcgcc
     1321 gtcgataaga taattgcggt ctgggaaaag aaagacaaaa gccgccatcc gggtttcgtg
     1381 ttcaaaacct aatcatcatt cctgggactg aaatggctct catcggtgac gccagcaaag
     1441 gaagaattgc cgccttcatc atcgacaatc ttttggcttg cgtagtctcg ctcttagccg
     1501 ttgccgcttt ggacactgac aacccggtta tagcgggacc gacgctgtgt cttgcttact
     1561 tagggtactt ttttctcttt gagagtgcct tgtccacaac ccccggcaag ttcctacacg
     1621 ggctcgtagt gcgaaagatt gacgggacga agtgcggtgt aagagaacac gcaattcgtg
     1681 cgcttgtcag aatgtttgag gcgaacccgc tgttatttgg cggattaccg gcggggatgg
     1741 ccatctttgc ttctgagcgg aagcagcgaa tcggcgattc gttagcgggc acagtcgtaa
     1801 tatcgaagaa agcccttgct gccgagtctg agcctatcaa ctaaaaaagc cgtcgcgatt
     1861 cctcgtgacg gcttttttca cttaaagaag tctccaggtc ttaccgcggc gctccttcgt
     1921 cgctaatatt aacgactgcc ggtttcgttt gacgcttcat ggcaattggt tgcagccctt
     1981 ccgaaggcac gcgccggaag ccatcaattc gcgaaagcca atactcacta aagggggaat
     2041 agatcacacc cttgctccgc gaggcgtgat agaagccttt ttcgtcggcg acgatgccca
     2101 cgtgcgccag gccgctgaag aaaaccagag tgccggcctt gaattgctct tcgactggcg
     2161 gcgcttcgaa tactgcccag tacgagcgcg ccgggccacg cgtgaagttc acgccgatct
     2221 cgttaaatgt gcgccacacc aaacccgagc agtcgaaagt gttcggcccg gtggtgttaa
     2281 agcgatatgg cgcgcccatg tgcgattcga tc
//
LOCUS       DATDBY010000517         2108 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_448680, whole genome shotgun sequence.
ACCESSION   DATDBY010000517 DATDBY010000000
VERSION     DATDBY010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448680"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VIT19_09650"
     CDS             <1..432
                     /locus_tag="VIT19_09650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839287.1"
                     /translation="APGALLEALDIYRRTFKPSKQLDRPYAMVGVNVVAAETDEEAHR
                     LFTTVQQSFTNLVRGSGGKLQAPIDNIEEYWTPAEKRAASRMLQHSIVGSRETVRRGL
                     ESFVELTNADELMVVTSLFDHAARVRSYEIVGEIGEIGETK"
     gene            844..>2108
                     /locus_tag="VIT19_09655"
     CDS             844..>2108
                     /locus_tag="VIT19_09655"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEY5839288.1"
                     /translation="MNQTSIAFNKVRFLTLASCLVLTAISPTALAQSDKAKKIDALMK
                     SFVQANQFSGVVLASENGKVIYEKAFGLANADYRIPNQVNTRIGIASITKLMTSVILT
                     RLIEQNKIAAADKLAKYIPDFPNGDKITIEMLARHRSGIPHRVMPPEMESVAFTSAEF
                     VNKVKQAKLAFEPGTARLYSSAGYAVLARALEIASGKTYAQLLHENVFTPAAMTDSVD
                     FDGEAVIERRAQDYYLSPDGLVNVPLKNYSFLVGAGSVYGTARDVYRFAEAVLDIKFG
                     PGVKAAFQGQGPFSGSGSTNGHRSYFELARDKKFGFVIVSNNAGVFDLISQGVKEILE
                     GKEATVKSFTVPTIVPNPNKNLEEFVGHYKRADGGETDVVLKGGFLYSSDIKLYPIKP
                     DCFFEYRFFGEACFIRDEAAKIKEIKWKG"
BASE COUNT          490 a          544 c          627 g          447 t
ORIGIN      
        1 gcgcccggcg cgctgttgga agctctcgat atttatcgca gaacgttcaa gccttcgaaa
       61 cagcttgatc gtccctatgc gatggttggg gtgaatgtcg tggcggcgga aacggatgaa
      121 gaggctcacc gtctgttcac cacggtgcag cagtcattca caaaccttgt gcgtggcagc
      181 ggcgggaagc tgcaggcccc aatcgacaac atcgaagagt attggacgcc ggcggaaaag
      241 cgcgcggctt cacgcatgct gcaacactcg atcgtcggtt cgagagagac ggtgcgcaga
      301 ggtctggaaa gctttgttga actgactaat gcggacgagt taatggtggt cacgagccta
      361 tttgatcatg cggcgcgtgt caggtcgtat gagatcgtcg gggagattgg ggagattggg
      421 gagacaaaat aatccacaga ttacacagat tcaatagagt aggcggtagg cagtgagtgc
      481 gcggcgcgca cgaaagcata aagcccgggg cgtaagcccc gggtgggcgt tgcgtctaaa
      541 atcacgagcc cgcgaagcgg gcggcagatg ttgcttcgaa ccacctgtcg cccgctccgc
      601 gggctctgcc tcctggacgc gcgatcctgg ggtttgctcg ctttcgctcg ctgcacccca
      661 ggctttatgc cgtcgtgcgc ttcgcgcact gaaatgagca gtgcgcaagc cgcgcaagat
      721 gcaattcaga gtgacccgcg tccgccagtt tttgaaactg gagacgattc gggtggtgaa
      781 aggagtaagc acaaagcagt aagcagtaag cagtaggcag aaagcagaaa agcagggggc
      841 ccaatgaatc agaccagcat cgcatttaac aaagtccgtt tcctcactct cgcatcatgt
      901 ttggtcttga ccgcgatctc gccgaccgcg cttgcgcaat ccgacaaagc caaaaagatt
      961 gatgcgctga tgaagtcctt cgtgcaggcg aatcagtttt cgggtgtcgt gctggcttct
     1021 gaaaacggca aggtcatcta tgaaaaggcg tttgggctgg cgaatgccga ctacagaatt
     1081 cctaaccagg tgaacacgcg catcggcatt gcttcgatta ccaaactcat gacgtcagta
     1141 atcctgactc gcctcatcga acagaacaag attgccgccg ccgacaagct cgcgaaatac
     1201 attcctgatt ttcccaacgg cgacaagatc accatcgaga tgctggcgcg gcatcgttcc
     1261 ggtattccgc atcgcgtcat gccgccggaa atggagtcgg tcgctttcac ttcggccgag
     1321 ttcgtcaaca aagtgaaaca ggcgaagctt gcattcgaac cgggcacggc gcggctctac
     1381 agctcggccg gctacgcggt cctggcgcgc gcgctggaaa ttgcttcggg caaaacttat
     1441 gcgcagctct tgcacgaaaa cgtttttact ccagccgcga tgacggactc agtcgatttt
     1501 gacggtgaag cggtgatcga aagacgcgcg caggattatt acctttcgcc ggacggcctg
     1561 gtgaacgtgc ctttgaagaa ttattcattt ctggtgggcg cgggttcggt gtacggcacg
     1621 gcgcgcgacg tttatcgatt cgccgaagcc gtcctcgata tcaagttcgg tccgggggtg
     1681 aaggcggcgt ttcagggcca gggtcctttc agcggcagcg gcagcacaaa cgggcatcgc
     1741 tcgtatttcg aactagcgcg cgacaagaag tttgggttcg tcatcgtctc gaacaatgcc
     1801 ggagtgtttg atttgatttc gcagggcgtg aaagaaattc tcgaagggaa agaagcgacg
     1861 gtgaagagct ttaccgttcc cacgatcgtc cctaatccga acaagaacct tgaagaattt
     1921 gtcggccact acaagcgcgc tgacggcggt gaaacggacg tcgtcttgaa gggcggattc
     1981 ctgtattcat cggacatcaa actctatccg attaaacctg actgcttctt tgaataccgg
     2041 ttcttcggcg aagcatgttt cattcgcgac gaggcggcga agatcaaaga gatcaagtgg
     2101 aagggcat
//
LOCUS       DATDBY010000518         6704 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_293102, whole genome shotgun sequence.
ACCESSION   DATDBY010000518 DATDBY010000000
VERSION     DATDBY010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6704
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293102"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..1167
                     /locus_tag="VIT19_09660"
     CDS             124..1167
                     /locus_tag="VIT19_09660"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEY5839289.1"
                     /translation="MKKKLLVLFAAFAVLSVTAFAQTQSGSGDSQISSSVDNQGIRRY
                     RIGPGDILDVRVYGQADLNSTAEVDENGNVSSLPFIEEPIPAKCRNEKEVQKLITDAY
                     SKYILKPRVSVRILERRSRPPAIVFGAVRMPSRIPMNRRLRLHEVLVTAGGVTQSANG
                     TIDVLHTEREVCLEPEDTITTAPVASAVAANHSKESDIGTLETFKIVDLKGGSAANNP
                     YIRPGDIVIVNEGQPIFITGMVVKPGDILIKDQLTLTRAIAMVGGMQKMANTSQVHVY
                     RKVEGKLSPEPMRYDYDAIRKGKAPDVLLQAYDIIDVRPAGTFSAKGLGELLKGIGTG
                     TLGQLPTRVLMPY"
     gene            1222..1494
                     /locus_tag="VIT19_09665"
     CDS             1222..1494
                     /locus_tag="VIT19_09665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839290.1"
                     /translation="MSQRIQAKKTGKRRWLTYLWIVGILLVVSFLIYFERTALLYVLA
                     TLGVTALLLVVAFADLGGDERSDATPLEAQAAGGGLGTGQPNLAKK"
     gene            1618..3789
                     /locus_tag="VIT19_09670"
     CDS             1618..3789
                     /locus_tag="VIT19_09670"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEY5839291.1"
                     /translation="MKKTKYAFLFLALVGVLSLSVASRLTQAQKNGDGGASSPIKYPE
                     TKKVETVDDYFGTKVADPYRWLENNDSPEVAAWVEAQNKVTFGYLDQIPYRGAVKDRL
                     TKLFNYPKYSSPSRRGEWFVFSKNDGLQNQSVYYIQKGLTGPPELLLDPNKFSGDGTS
                     RLGAFSWSKSGKYIGYGISKGGSDWNDVHVLDVATKKPLSDVVEWMKVSGVAWRGDEG
                     FFYSRYPAPEKGKELTTKNEFHTIYYHKLGTPQSEDELVYEDKKNAQRFHTASVTEDE
                     RYVLLYISERGKGMDGNALFFRDLKKGDKTFTPIMADITNDSYSVIDTVGDKFLIETN
                     HGAPNSKVVLYDPATKTWKDVIAEKTEPLQQSGTAGGKMFVTYLKDVTTRAYVYSLAG
                     KLENEIILPGLGSAGGFGGWQDDKFVFYSFTSFNYPPTIFKYDIATKKSSVFRTVEIP
                     GFIATDYEVKQVFYNSKDGTRVPMFLTYKKGLKLDGNNPTVLYGYGGFNVNTSPGFSA
                     LRIALLEQGVVYASANMRGGGEYGEKWHEAGIKLKKQNVFDDFIAAAEWLIKSKYTSS
                     NKLAIQGASNGGLLVGAVANQRPDLFKVVHQHAGVMDMLRYHTFTIGWNWAADYGRSD
                     ANEAEFKALYAYSPIHNTKAGTKYPAVLITTADHDDRVVPAHSFKYAAAMQAAQGGDN
                     PIVIRIDTKSGHGASSTTKALEQNADIFSFMFYNLGVTPKL"
     gene            complement(3821..4429)
                     /locus_tag="VIT19_09675"
     CDS             complement(3821..4429)
                     /locus_tag="VIT19_09675"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEY5839292.1"
                     /translation="MKRRLLPLALIITALAILSYLAGDKLILVARIAQLYSAEPDQQL
                     AMPVAGVSKDKVNDSWHAPRSAGERQHEGQDIFAARGTPVLSATNGYVVSVAENKLGG
                     RTISVVGAGGRIYYYAHLDQYVDDMSVGKQVTPETVLGYVGTTGNAAGTPPHLHFGVY
                     SSSGAINPLPLLSDRPEVKTAPAKNEIQRKRPASKRRPSSAK"
     gene            complement(4706..>6704)
                     /locus_tag="VIT19_09680"
     CDS             complement(4706..>6704)
                     /locus_tag="VIT19_09680"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEY5839293.1"
                     /translation="GGVPRFDLVKVEFFKPAMESAMAENLAEIDKIANNTAAPTFENT
                     IVAMERAGEGLNRVGPLYNVWLTTMSTPDFQVVQKEMAPKLAAFSDKITQNEALFKRI
                     EAVYNSPDKAKLSAEQQRLVWLRYTNFVRAGAKLDAKAKARLTEINQQLAGLFTKFST
                     NVLYEENNQFVQLKSEADLAGLPQSIKDAAAAAAAEKKQEGWLIVNTRSSVDPFLTYS
                     DRRDLREKVWRMFIMRGDNGDERDNNAAITQILQLRTERAKLLGYTTHAHWRVENSMA
                     KTPDRAMELMLAVWKPSVKRVNEEVADMQALVAKEGLSFQIAPWDYRYYMERVRKAKY
                     DLDQNQVKPYLQLDKLREAIHWVSGELFNFKFTPADVPVAHPDIKVWEVTDKTSGKHI
                     GLWYFDPFARQGKRSGAWMNAYRTQERVNGEITTIVSNNSNFVKGKPGEPTLISWDDA
                     VTMFHEFGHALHGLNSNVTYPSLSGTAVARDYVEFPSQLMEHWLSTPEVLQKFALHYE
                     TGKPIPQELVAKIDRSKTFNQGFATVEYLAAAILDMKLHLLGDKKVDARTFEKEALAE
                     IGMPKEIVLRHRLPHFLHVFSSDAYSAGYYSYLWSDVITADAFGAFTEGGGAYDKKVS
                     ERLRKNIFSVGNTIDPALGYRNFRGRDPKVEALMKKRGFGT"
BASE COUNT         1488 a         1845 c         1879 g         1492 t
ORIGIN      
        1 caactggtta ttcacaggtt tcggtatctt gctgtctccc cgaccatcca agcgccgagt
       61 gtagaacgtt atcccaaacg aagacgtctt tggctgattt caggcgcttc tcgaggtttt
      121 gctatgaaaa agaaactcct agttttgttc gcggctttcg cggtcctcag tgtcactgct
      181 tttgcgcaga cgcagagtgg cagcggtgat tcccaaattt catcgtccgt tgataatcag
      241 ggcatcagac gatataggat cggcccgggt gacatcctcg atgttagagt ctatggccag
      301 gcggacctca actcgaccgc tgaagtggac gaaaacggaa acgtctcttc gctgcccttc
      361 atcgaagaac cgattcccgc caaatgccgt aacgagaaag aagtccagaa gctcatcact
      421 gatgcgtatt caaaatacat cctgaaaccg cgcgttagtg tccgcattct tgaaagacga
      481 agccggccgc ccgcaatcgt attcggcgcg gtgcgaatgc cgtcgcgcat tcccatgaat
      541 cgccgtctac gactgcatga ggtgctcgtg acggcgggcg gtgttactca gagcgcgaac
      601 ggcactatcg acgttctgca cactgaacgt gaggtgtgtt tggaacccga ggacacgatt
      661 accactgccc cggttgcttc cgcagtcgcc gctaaccata gcaaagagtc agatatcgga
      721 acgcttgaga ccttcaagat cgtcgatctg aagggtggat cggctgcgaa caatccctac
      781 ataagaccgg gggatatcgt aattgtgaac gagggccagc ctattttcat tacgggcatg
      841 gtggttaagc cgggtgacat tctaatcaag gatcagttga cgctgacgcg tgccatcgca
      901 atggtcggtg gaatgcagaa gatggccaac acgtcccagg ttcacgtcta ccgtaaagtg
      961 gaaggcaaac tcagtccgga accgatgcga tacgactacg acgccattcg caaaggaaaa
     1021 gcacctgacg tgctgctcca ggcttacgac atcatcgatg tgagacccgc cgggacattt
     1081 tcggctaagg gcctgggtga gctgctcaag ggaatcggaa ccggtacgtt aggacagttg
     1141 cctacgcgcg tgctgatgcc gtactaaaat ttacgtcgct tctcgaaagg taaaaggcaa
     1201 cagttttctg ttgtgggatc tatgagtcaa cgaatacaag caaagaaaac tggaaagagg
     1261 cgttggctta cctacctttg gattgtcggg attttgctcg tcgtctcatt tctcatttat
     1321 ttcgaacgca ctgcgctgct ttacgtgctc gccacgctcg gggtgacggc gctacttttg
     1381 gtcgtagcgt ttgctgatct gggcggtgac gagcgttcgg acgcgacgcc gctcgaggcg
     1441 caagctgcgg gcggtggcct cggaaccggc cagccaaatc ttgccaagaa ataagtccta
     1501 acatcgcgtt tgtaattgtc ggccaaagcc cgcgaatgct ttggcttttc tggctgtgtc
     1561 gattacagta tgcagcgttc ccgacatcag ttttcagctt ttccggaggt ttaattaatg
     1621 aagaagacga agtatgcgtt cctgttcctc gcgctggtgg gcgtgctgtc cctatctgtt
     1681 gccagtcggc tgacccaggc gcagaagaac ggtgatggcg gcgccagttc cccaattaag
     1741 tatcccgaaa caaagaaagt cgaaaccgtc gacgattact ttggcactaa ggtagccgac
     1801 ccatatcgat ggctcgagaa caacgattca cccgaagtgg ccgcctgggt cgaagcccag
     1861 aacaaagtga cgttcggtta tcttgaccag attccgtatc gcggcgcggt caaagatcga
     1921 ctgacgaagc ttttcaacta cccgaagtac agctcacctt cgcgccgcgg agagtggttc
     1981 gtcttttcga agaacgacgg tctgcaaaac cagagcgtct actacattca gaagggcctg
     2041 accggtcccc cggaattact gctggatccc aacaagtttt ccggcgacgg cacgtcgcgc
     2101 ctgggcgcct tttcgtggtc aaagagcgga aagtacatcg gttatggaat ttcgaaaggc
     2161 ggctcagact ggaacgacgt gcatgtcctg gatgtcgcga ccaaaaaacc gctttctgat
     2221 gttgtcgagt ggatgaaagt ttcaggggtc gcctggcgtg gggatgaagg cttcttttat
     2281 agccgctatc ccgcaccgga aaaaggcaag gagctgacga caaagaacga gttccacacg
     2341 atctactacc acaaacttgg cacgccgcaa tccgaagacg agttggttta cgaagataaa
     2401 aagaacgcac aacggttcca cacggcctcc gtcaccgagg atgagcgtta cgtgctcctt
     2461 tatatttctg agcgcggcaa gggaatggac ggcaacgctc tgttcttccg cgatctgaag
     2521 aagggcgaca agactttcac gccgatcatg gcggacatca ctaacgacag ctacagcgtc
     2581 atcgacaccg tcggcgacaa gttcctgatc gaaaccaacc atggcgcgcc gaacagcaag
     2641 gtcgttcttt acgacccggc gacgaagacc tggaaagacg ttattgcgga aaagacagag
     2701 ccgctgcagc agtcaggcac cgcaggcgga aaaatgtttg tcacgtatct gaaggacgtc
     2761 acgacgcgcg cgtacgtgta cagcctcgcc ggcaagctcg agaatgaaat tattttgccg
     2821 ggattgggat ccgccggtgg ctttggcggc tggcaagacg acaagttcgt cttctatagc
     2881 ttcacgtcat tcaactatcc gccgacgatt ttcaagtacg acatcgcgac gaagaagtct
     2941 tctgtctttc gcaccgtcga gatcccaggc ttcattgcca cggattacga agtgaagcag
     3001 gttttctaca acagcaagga cggcacgcgc gtgccgatgt tcctcactta taaaaagggc
     3061 ctgaagctgg atggcaacaa cccgacggtg ctgtacggtt acggcggttt caacgtcaac
     3121 accagtccgg ggttcagcgc gctcaggatt gcgctgcttg aacagggtgt tgtctacgcg
     3181 tccgcgaaca tgcgtggcgg cggcgagtat ggcgagaagt ggcacgaagc cggcataaaa
     3241 ctcaagaagc agaatgtgtt cgatgatttc attgccgcgg ctgagtggct gattaagagc
     3301 aagtacactt cctcgaacaa gctggcgatc cagggcgcct caaacggtgg tttgctggtc
     3361 ggcgcagtcg cgaatcagcg tcccgacctg ttcaaagtag tgcaccagca cgcgggcgtg
     3421 atggacatgc tgcgttacca cacgttcacg attggctgga actgggcggc ggattacggt
     3481 cgcagcgacg cgaatgaagc tgagttcaaa gcgctgtatg cgtactcgcc catccacaac
     3541 accaaggcgg ggacgaagta tccggcggtg ctgatcacta cggccgatca cgatgatcgc
     3601 gtggtgccgg cgcactcatt caagtacgcg gcagccatgc aggcggcgca gggtggcgac
     3661 aatccgattg tcatccgcat cgacactaag tcgggtcacg gcgccagcag caccaccaag
     3721 gctttggaac agaacgccga catcttctcg ttcatgttct ataacctcgg cgtcacacct
     3781 aagttgtaat cccgggagcg cgggccattc ctggccgcaa tcatttagct gaggagggcc
     3841 ggcgtttcga cgctggcctt tttctttgga tttcgttttt cgccggcgcc gttttcactt
     3901 ccggcctgtc actcaacaac ggcaaaggat tgatcgcacc actgctcgaa taaacgccga
     3961 agtgaaggtg cggcggcgta cccgcagcat tcccagtcgt gccgacgtaa ccaagcacgg
     4021 tctcaggtgt aacctgcttg ccgacgctca tgtcatcaac atactgatca agatgtgcgt
     4081 agtaataaat tcttcctccg gcgccgacga ccgaaatcgt ccgtccgccg agcttgtttt
     4141 cggcgacgct gacgacgtag ccgttggtgg cggacagtac gggtgtaccg cgagcggcga
     4201 agatatcctg accttcatgc tgtcgctcgc ccgcgctgcg cggggcgtgc caagagtcgt
     4261 tgaccttatc ttttgaaacg cccgctactg gcattgccag ttgctgatca ggttccgcgg
     4321 agtagagctg tgcgatgcga gcgacgagga tcagcttgtc gcccgctaaa tagctcaaaa
     4381 tcgccagcgc cgtaatgatc aatgcgaggg gaagtagacg tctcttcatg ttgagtgtac
     4441 gacgcaaaag aaggccagtt cgttgtgccg atagcaaagc gcaaaatgat tagaatctga
     4501 ggccaaggta ggtccggaaa agcggggcgg ctctgccgca gcacattgcg gaaaggctgt
     4561 ggctttccgt gagacgtcac ccaatgaaac aaatgcggcg aggctaagcc tcgccgcatt
     4621 atcttttggg tggacttatc ggaaaggcag agcctttccg cactgtgcgg cggcggagcc
     4681 gcaaagaacc cgccgaagat gccagctatg taccaaatcc gcgcttcttc atcaacgctt
     4741 cgacctttgg atcgcggccg cgaaagttgc ggtagccaag cgccggatca attgtgttgc
     4801 ccactgagaa gatgttcttg cgcagacgct ctgagacctt cttgtcgtac gctccgccgc
     4861 cttccgtgaa ggcgccgaac gcgtccgcgg taattacatc cgaccaaagg tagctatagt
     4921 aaccggccga atacgcatcg ctcgagaaca cgtgcaggaa gtgcggcagg cggtgacgca
     4981 gcacgatttc cttcggcatg ccgatttccg ccaacgcctc tttttcaaac gtgcgcgcgt
     5041 cgaccttctt gtcgcccagc aggtgcagtt tcatatcgag aatcgcggcc gccagatact
     5101 caaccgtcgc gaatccctga ttgaaggtct tagaccgatc aatcttggca accaactcct
     5161 gcgggattgg tttcccggtc tcgtaatgca aggcaaactt ttgcagcacc tcgggagtgg
     5221 acagccaatg ttccattaac tgtgaaggga attcgacgta gtcgcgcgcc acggccgttc
     5281 ccgacagcga cggataagtg acgtttgaat tcaagccgtg cagcgcgtga ccgaattcgt
     5341 ggaacatcgt aactgcgtcg tcccacgaaa tcagcgttgg ctcgcccggc ttgcccttca
     5401 cgaagtttga attgttggaa acgatggtcg tgatctcgcc attgacgcgc tcctgagtgc
     5461 ggtaagcatt catccacgcg ccggaacgtt tgccctgacg cgcgaacgga tcgaagtacc
     5521 agaggccgat gtgcttgccc gaagtcttgt ccgtcacttc ccaaaccttg atgtcgggat
     5581 gcgcgacggg aacatcagct ggggtgaact taaaattgaa cagctcgccc gagacccagt
     5641 gaatcgcttc gcgcagcttg tcgagttgca ggtaaggctt cacctggttc tgatcgagat
     5701 cgtatttcgc cttgcgcaca cgctccatgt agtagcgata atcccagggc gctatttgaa
     5761 aggacaaacc ctctttcgca actagtgcct gcatgtcggc gacttcttcg ttcacgcgct
     5821 tcaccgacgg cttccacacg gccaacatca gctccatggc gcggtcaggc gtttttgcca
     5881 tcgagttctc gacccgccag tgcgcatgcg tcgtatagcc gagcagcttg gcgcgctcgg
     5941 tgcgcagttg cagaatctgc gtgatcgcag cgttgttgtc gcgctcgtcc ccgttgtcgc
     6001 cgcgcatgat gaacatgcgc caaacttttt cgcgcaggtc tcgtcgatcg gagtacgtga
     6061 gaaacggatc gacggaggat cgcgtgttca cgatcagcca gccttcctgt ttcttttccg
     6121 ccgccgccgc tgcggcagca tctttgatgg attgcggcag gcccgcgaga tcagcttcac
     6181 tcttcagttg cacgaactga ttattttctt cataaagcac gttggtgctg aacttcgtaa
     6241 acaggccggc gagttgttgg ttaatttcag tcaaccgggc cttggctttc gcgtccagct
     6301 tggccccggc gcgcacaaag ttcgtatagc gcagccagac caatcgctgc tgttcagcgc
     6361 tgagctttgc cttgtcgggc gagttataga cggcttcgat tctcttaaag agtgcttcgt
     6421 tctgcgtgat cttgtcgctg aacgctgcca gcttcggcgc catctctttc tgtacaactt
     6481 gaaagtcggg tgtactcatg gtcgtcagcc acacgttgta aagtggcccg acgcggttga
     6541 ggccctcacc cgcgcgttcc atcgcgacaa tcgtattctc aaacgtcggg gccgcggtgt
     6601 tgtttgcaat cttgtcgatc tccgcgaggt tctcagccat cgccgattcc atggcgggct
     6661 tgaagaactc gaccttcacg agatcgaagc gcggcacgcc gccg
//
LOCUS       DATDBY010000519         3090 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2701946, whole genome shotgun sequence.
ACCESSION   DATDBY010000519 DATDBY010000000
VERSION     DATDBY010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3090
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2701946"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1507
                     /locus_tag="VIT19_09685"
     CDS             <1..1507
                     /locus_tag="VIT19_09685"
                     /inference="COORDINATES: protein motif:HMM:NF019912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839294.1"
                     /translation="AKVDTAGVVTAVARGNATITAAAGEAKTTTKVTVSGNTLSSIKV
                     EPASANARTGDVVSLKAMGTPNNPFTPRWTVSGAGATVYPDGAFVAEQPGTYVVTATA
                     GNVSATSSIIVSPRSAERQLQIVGRAMFKDVQGAEVWLIGNYAYYSTIADRFFVYDIS
                     DPAHPKLTDTVKVDARIINDISTTADGKILVISRENASSRKNGIAFYDTSDPAHPKLI
                     SEYTATVTGGVHSAFIDGHYVYLTDDATGSMRVIDFADVKNPKEVARWQTEPQHATYI
                     RTKEAETTAGRYLHDLQVKDGLAYLAYWHDGLVILDVGAGIKGGSPENPKLVSQLRFN
                     HYELYGDGWLAGTHSVFRYKNYVFVGDEVFPSFFDIQSRKRIPVRGTTHVIDVSDINN
                     PRKVAEYEVPEGGAHNMWVENDVMYMGYYSGGARVVDVSGELRGDLYRQGREMGRLFT
                     ADPEGYRPNLPLAWGAQPHKGLIYFNDINSGLWVVKVGEKIEKGSTTSPGQ"
     gene            1791..2237
                     /gene="tnpA"
                     /locus_tag="VIT19_09690"
     CDS             1791..2237
                     /gene="tnpA"
                     /locus_tag="VIT19_09690"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HEY5839295.1"
                     /translation="MPATYCSLHYHAVFSAKDRYPLITKDWRNNLHAYIGGIAKNIGG
                     VPVAIGGIEDHVHVLMGLRATHRLDYVMRDLKSGSSEWVHQTVGKTSFVWQPGYFGAT
                     VSPSQVEAVTRYILNQEEHHRHKSFQDEYIEMLKLAGIEYDERYVW"
     gene            2372..2845
                     /locus_tag="VIT19_09695"
     CDS             2372..2845
                     /locus_tag="VIT19_09695"
                     /inference="COORDINATES: protein motif:HMM:NF039391.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6265 family protein"
                     /protein_id="HEY5839296.1"
                     /translation="MKTLLLIGVLLMLVCSASAQSPKPSINDLAWLAGCWEANLRGRE
                     VSEQWMKPGGGIMLGMARTVAQGKAAEFEFTQIREDKDGSIYYVAKPSGQAETSFKLV
                     KLQNKAAVFENPQHDFPQRIIYRLEAGGSLFARVEATENGKTRGIDYPYKRAKCE"
     gene            complement(2898..>3090)
                     /locus_tag="VIT19_09700"
     CDS             complement(2898..>3090)
                     /locus_tag="VIT19_09700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839297.1"
                     /translation="KVLHGVVISPDDLYAFVTVEGVGNEPGTVEIIDLKAMKTVATVD
                     VPRQAAGIDFYKIEFVTRQ"
BASE COUNT          694 a          879 c          880 g          637 t
ORIGIN      
        1 cgcgaaagtt gatacggcgg gcgttgtcac cgcggtcgcg cgtgggaatg caaccatcac
       61 ggcagcggcc ggcgaagcga aaacaacgac taaagttacc gtctccggaa atactctgag
      121 ttcgatcaag gtcgagccgg catcggctaa cgcacgcacc ggggacgtgg tcagcctcaa
      181 ggcaatgggt actccgaata accctttcac accgcgctgg acggtgagcg gcgccggcgc
      241 gacggtgtac ccggacggcg cgttcgtcgc tgaacaacca ggtacgtatg tcgtcactgc
      301 caccgccgga aatgtttccg cgacgtcatc aattatcgtt tcgccgcgca gcgcggaacg
      361 acagctacag atcgtcggcc gcgcgatgtt caaagacgtt cagggcgcgg aagtctggct
      421 catcgggaat tacgcttact actcgaccat cgccgatcgc ttctttgtct acgacatctc
      481 cgatccggcg catccgaaac tgactgacac ggttaaagtg gatgcgcgga tcatcaacga
      541 tatcagcacg accgccgacg gaaagatcct cgtgatttcc cgcgagaacg cttcgagtcg
      601 caaaaacggc atcgcgttct acgacacctc tgatcccgca cacccgaaac ttatttctga
      661 atacacggcg accgtcaccg gcggagtcca cagcgccttt atcgatggcc actatgttta
      721 cctgaccgac gacgcgaccg gctcgatgcg cgtcatcgac tttgcggacg ttaagaatcc
      781 gaaggaggtc gcgcgctggc agaccgaacc tcagcacgcg acgtacattc gcactaaaga
      841 agccgagact accgccgggc gttatctgca cgatcttcag gtgaaggacg gtctggctta
      901 tctcgcttac tggcacgacg gcctggtgat tctcgacgtg ggggccggca tcaaaggcgg
      961 cagccctgag aatccaaagc tcgtcagtca attgcgcttc aatcactacg agctttacgg
     1021 cgatggctgg cttgcgggta cgcactcagt tttccgttac aagaattatg tgttcgtcgg
     1081 cgatgaagtc ttcccatcct tcttcgacat tcagtcgcgg aagcgaatcc cggtgcgcgg
     1141 cacaactcac gtgatcgacg tttccgacat taacaatccg cgcaaggttg ccgaatacga
     1201 agtgcccgaa ggcggcgcgc acaacatgtg ggtcgagaac gacgtcatgt acatgggcta
     1261 ctacagtggc ggcgcgcgcg tggtcgatgt ttccggcgag ctgcgcggcg atctctatcg
     1321 acaaggccgc gagatgggcc ggctgttcac cgccgatccc gaaggttacc ggccgaacct
     1381 gcctttggcc tggggcgcac aaccacacaa aggcctgatc tatttcaatg acatcaactc
     1441 cgggctgtgg gtggtgaagg tcggagagaa aatcgaaaaa ggatcgacga caagcccggg
     1501 acagtgatag cgtttcgctc ctcgatcttc atcttccatt gcaatttttg ttggatacgc
     1561 cgatgcgaga gaaggtgcta agctgacttt tttcagcagg cgccacgtct catgtgtcac
     1621 ggtccggagt aacgagttgt cctcgcaaat cgtcggatct cgccacgtcc aaaacaatga
     1681 gcgccgctgg cgcggcagat ggtagccagt ggcaagcgcg tcgcgccgcc actggttaag
     1741 caggaacccg caaaccgcgc tctgcaggag cgcgcagaag ggagactctc atgcccgcca
     1801 cctattgcag tcttcactat catgctgtgt tctcggccaa ggatcgatat ccgttaatca
     1861 ccaaagactg gcgcaacaat cttcacgctt acattggcgg catcgctaag aatattggcg
     1921 gcgtgccggt cgcgatcggc ggaattgaag accacgtcca tgtcctgatg ggcctgcgcg
     1981 cgacacatcg cctggactac gttatgcgcg atttgaaaag tggatcttcc gaatgggttc
     2041 atcagacagt cggcaagacc agctttgtct ggcaaccggg atactttggc gctactgtga
     2101 gtccatctca ggttgaggcc gtaacgcgat atattcttaa tcaggaagaa catcatcggc
     2161 acaagtcatt tcaagatgaa tacattgaaa tgctcaaact cgcggggatt gaatacgacg
     2221 aacggtatgt gtggtgatat tcttcgcgcc ccgcccgggc gcgattgact tgtttatttg
     2281 ggaccagtgg ctgcgctgcg cttgccactg gctaccatcg tccgcgcctg cggcgctcgt
     2341 tgcgtctatg agtaaaggaa tcgaatcggg aatgaaaacc ttattgttga ttggcgtcct
     2401 tctgatgctg gtgtgttctg cctccgccca atcgccaaaa ccttccatca acgatctcgc
     2461 ctggctcgcc ggatgttggg aagcgaacct gcgcggccgc gaagtgagcg aacagtggat
     2521 gaaacccggc ggcgggatca tgctcggaat ggcgcgcacg gtggctcaag ggaaggctgc
     2581 cgaattcgag tttacgcaaa tccgcgaaga caaggacggg tcgatttact acgtcgcgaa
     2641 accgtctggc caggccgaaa cttctttcaa gctcgtgaag ctccagaaca aggcagctgt
     2701 ctttgaaaat ccgcagcacg actttccaca gcggatcatc tatcgcctcg aagccggcgg
     2761 gtcgttgttc gcgcgcgtcg aagcgacgga gaacgggaag acgcgcggca tcgactatcc
     2821 ctacaagcgc gcgaagtgcg agtgacggta gcggggcagt agcccgaccg tgagggaggg
     2881 cgttaagcgc gattgaatca ctgtcgcgta acgaactcga tcttatagaa atcaattccc
     2941 gccgcctggc gaggaacgtc aaccgtcgcg accgtcttca tcgctttcaa atcgattatc
     3001 tcaaccgtgc cgggttcatt tccgacgcct tccaccgtaa cgaatgcata aaggtcgtca
     3061 ggcgagataa cgacgccgtg cagcactttt
//
LOCUS       DATDBY010000520         2126 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1472964, whole genome shotgun sequence.
ACCESSION   DATDBY010000520 DATDBY010000000
VERSION     DATDBY010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2126
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1472964"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..1572)
                     /locus_tag="VIT19_09705"
     CDS             complement(109..1572)
                     /locus_tag="VIT19_09705"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY5839298.1"
                     /translation="MSCRRGPSALDAIDPIDRRSNLPLGDPISRDLSEIRERGALVVL
                     APYNSTTYFIYQGEPLGYEYELLRAFAKDLGVPLKMVVVTDPKSMFPLLNSGDGDIAA
                     SRLIPPKQPDVQSHVAFTNALYRTEPALVQQEQAPSAAGEGTEKALAAGPPQPLPELD
                     IQARLVTNPAQLAGRTVTLAQESAYRRTLLELSDEISGDIHIVEMGEKIQDETLAQKV
                     ARGEIQFTVMQKNLAELKEVEFKNLKIRPVLGASHSVAWAVRKNSPELANELNRWIDE
                     KKNGPLFDNLYKKYFIDRRRYLERVTSEYLTSKTGKLSEFDALIKQHAGELNWDWRLL
                     ASQAYQESRFRPAARSWAGATGLLQLMPKTAKEFGVTNALDPADNVQGAVKFLKWLQR
                     YWERRIPDENERLKFVLASYNTGAGHVEDAQRLTEKYGGNPKKWDDVSYWLLQKSTQQ
                     YASDTVVKFGFCRGLEPVNYVTNILERFDHYKQFVVT"
     gene            complement(1784..>2126)
                     /locus_tag="VIT19_09710"
     CDS             complement(1784..>2126)
                     /locus_tag="VIT19_09710"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY5839299.1"
                     /translation="NTGSITGLEGSKHLLDYASTKGAIHAFTKSLAQNLVEKGIRVNC
                     VSPGPVWTPLNPSDKPPEKVAQFGADTPMKRPAQPEEIAPAYVYFASDIDSSYVTGEV
                     LTLLGGETTAA"
BASE COUNT          473 a          596 c          581 g          476 t
ORIGIN      
        1 cttaaaagcc ggcattgccg cgtcagagga ggtggatttg aatgcaatgc agcaaccggc
       61 gtaaccgctg atttaactca ccctccctca cggtcgggtt tctgccaatc aagtaacaac
      121 aaactgttta tagtgatcga accgctcgag gatgttggtg acgtaattaa ccggttcgag
      181 gccgcgacaa aagccgaact ttaccactgt atccgaagcg tattgctgcg ttgacttttg
      241 caatagccag taggaaacgt cgtcccattt tttcggattg ccaccatatt tctcggtcag
      301 tcgctgagcg tcttccacat gacctgcgcc tgtgttgtac gaagccagca caaacttgag
      361 ccgctcgttt tcgtcaggaa tacgccgctc ccagtaacgc tggagccatt tcaagaactt
      421 caccgcaccc tgaacattgt cggctggatc gagcgcattg gtaaccccaa actcctttgc
      481 tgttttgggc atcagttgca aaagtcccgt ggcgcccgcc cacgaacgcg ccgccgggcg
      541 aaaccgtgat tcctgatatg cctgcgaggc caacaaacgc cagtcccaat tcagctcgcc
      601 tgcatgctgc ttaatcaaag cgtcgaattc gctgagcttg ccggtcttcg aagtgagata
      661 ttcactggtg acgcgctcca gatatcgacg gcggtcgatg aaatactttt tatagagatt
      721 gtcgaagagc ggcccgttct tcttctcgtc aatccagcga ttcagctcgt tcgccaactc
      781 aggcgaattc tttctcacgg cccaggcgac gctgtgagac gcgcccagga caggccgtat
      841 cttcaggttt ttgaattcaa cttctttgag ttcagcaaga tttttctgca tcacagtgaa
      901 ttgaatttca ccgcgtgcga ccttctgcgc caacgtctca tcctggatct tttcgcccat
      961 ctcgacgatg tgaatgtctc ccgagatttc atcggacaat tcgagcagcg tgcggcgata
     1021 ggctgactct tgagccagcg tcaccgtgcg gccggccaat tgcgcaggat tcgtgaccag
     1081 ccgcgcctgg atatctaact ctggcagcgg ctgcggaggt ccggccgcca gtgccttctc
     1141 tgttccttca ccggccgccg acggagcctg ctcctgttgc accagcgctg gctcggtacg
     1201 atagagcgcg ttcgtgaatg ctacgtgtga ctgaacatcc ggctgtttgg gaggaataag
     1261 tcgggaggct gcaatatcgc cgtcgccgct gttgagcaaa gggaacatgc tcttcggatc
     1321 agtgaccaca accatcttca aggggacccc gaggtctttg gcaaaggcgc gcaacagttc
     1381 gtattcgtaa ccgagcggct cgccctggta gatgaaataa gtagtcgagt tgtaaggagc
     1441 gagaaccact aaggcgcctc gctcgcgaat ctctgacagg tcgcgactga taggatcgcc
     1501 caaaggtaga ttcgagcgcc gatcgatcgg atcgatcgca tcgagagcag atgggcctcg
     1561 tctacacgac aatccggacg agatgaggag ggaaattaga acaagcagca gcaatctaat
     1621 ctggagcttc atgacgccag tctcagccga aacagtaagc aagtcgttag gcggcctact
     1681 gcccgccaac ggacgcgcaa acaagactgt taagagcaaa ggggctatta gccaagtcag
     1741 agggcgaaaa aagagtcccg tttcaacgcg tcgagaagtg gccttacgcc gccgtcgtct
     1801 cgccgcccaa cagcgtcaga acttcgccag tcacgtaact cgaatcgata tcggaagcaa
     1861 aataaacgta agccggcgcg atctcttccg gctgggcggg gcgtttcatc ggggtgtcgg
     1921 cgccgaactg cgcgaccttt tccggtggtt tgtcggatgg atttagcggc gtccagacgg
     1981 gcccgggcga aacgcagttc acgcgaatgc ctttctcgac caggttctgc gccagcgatt
     2041 tcgtgaacgc gtgaatcgca cccttggtcg atgcgtagtc cagcagatgt ttgctgcctt
     2101 cgagaccggt gatggaaccc gtgttg
//
LOCUS       DATDBY010000521         6426 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_859835, whole genome shotgun sequence.
ACCESSION   DATDBY010000521 DATDBY010000000
VERSION     DATDBY010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6426
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_859835"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..756)
                     /gene="rnc"
                     /locus_tag="VIT19_09715"
     CDS             complement(46..756)
                     /gene="rnc"
                     /locus_tag="VIT19_09715"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR02191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEY5839300.1"
                     /translation="MENLDHLEDVIGYHFRDRDLLTQAMTHRSWAHEQVSPRAATQAR
                     RLHNEALEFLGDSVLGLLVADYLFRANPHATEGELSRMKHRLVSAPTLAKASKALGLG
                     EFLRFGRGEEKSGGRRKGALLADVLEAVIGAIFMDGGLSAAKDFITRTLGEELRRADP
                     VAAAAADPKTMLQERLQANHEPAPQYTVIETLGPPHHRTFHVELKWDGGSARGEGRTI
                     KAAEAAAAQLALEQMEAK"
     gene            complement(838..2016)
                     /locus_tag="VIT19_09720"
     CDS             complement(838..2016)
                     /locus_tag="VIT19_09720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839301.1"
                     /translation="MKFINRATILVAVLTLSAVSAWAQAKECTDDFKTATYSKWYDNR
                     KDNQDAAYAAAKEYVAVCTTDDQYSAVLKKFIADYDKLHSNQKLATDFDAAVKAKNYA
                     EQNRLGKQLVAMPSYADNAVIYLLMAGAGLGDPNLLSESAQAAKKAIELVEAGKTFDK
                     SGYTTRDQALAAMNYLIAKSTMKTSPTDAIPFYIKAAKYQSDLQKSPVVYNELATAYG
                     EGPVAKYARDYAAIAAAGKSVDDPETKLVVANLNQALDRQIDAFARAAAVSTAEADKK
                     AFLDILAAMYKDRHKKDPAQNELNTMVASALSRPLPDAPTPITTLPTPAGPAPVGTGA
                     APTSGAPSSAGAGTNGAGSAAPSTTKPAPSGTAAPTTAPAKPTATPKPKPRRANHRRG
                     "
     gene            complement(2325..4103)
                     /locus_tag="VIT19_09725"
     CDS             complement(2325..4103)
                     /locus_tag="VIT19_09725"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEY5839302.1"
                     /translation="MTRTSPLDVQSSNEVLLGSPRAELDFVSFHEELLMNQMGFPRVA
                     RVSFVFFIFFAFILSVSVETSAKGKRSKGKAARSSKSTRARASARTSRNRRGRVQVAR
                     SSRRRGRVQLSRREVRAERARAAREQAAHIAKLQRRLGRKLTRRELAAESRRIGGSRR
                     RALEEARRRAEAARQAAIARQRAIDEGFRRETQANIANDSSIGEDMEVRAAAVSALGN
                     TAGTVVVMDPKTGRVYTVVNQEWGLRRGFKPCSTIKLVTGVAGISEKVIAPVEAVSDG
                     GRHRLDLTDALAYSNNTYFQHVGGQVGFDKMISYAREMGLGEKTGINYTNESPGKVPL
                     FKSGWALNRMSSHGDDFEVTAIQLGTMVSAIANGGKLLVPHLPRSIEETAHFKTEVRR
                     KVGVEKETYNRLLPGMIGAVNYGTGRRSYRPEQTVAGKTGTCIDQHERAWIGLFTSYA
                     PVVNPKLAVVVITRGSAGRSKHAAAIAGNIYRTLSPRFGTQIDFQVAEADDETQNTNG
                     KAALNEEAAETKAATEAEEAGEELDANGTPQTAAPNATSPDLKIKATTMPVENKPKTG
                     TPAKTTPKEATDGRTRRIQPQPQPQP"
     gene            4332..5870
                     /locus_tag="VIT19_09730"
     CDS             4332..5870
                     /locus_tag="VIT19_09730"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEY5839303.1"
                     /translation="MALSRLLNSFRVRLLLLLALLLVVTVSVQYYVNLRAVRSNKQFI
                     VEQQQAIMAGVALGVNSITNGEWLDDMRKEANSPLFGDRADRVQNVLIVDEHGYVKDS
                     LDQNQIPVQLPDKSRRYVNVKDIGLPPLKSAVDLHEFNIPLPQGMKRAPAGPRLDLPA
                     FYFPVDTTSGRYYVIVVLGSANNLATGLQQQSRRSLLWTVAVLLAMTALTAVVVWQFT
                     RPVKSLSTAARRVAGGDFSFRVPSNGRRDEMGELTELFNDMTVQLGRTRELEAQLNSA
                     EKAVVVSRLASAIAHEIRNPLNYINLTLDHLRTSFAPADPQKQEKFDSLTSQLKTEVA
                     RINQRITEFLNYSRPPKLEPRQLDLGDLAHDALRTVEVQASENNVELVVEEVGGKHSV
                     MADAESLRSALTNLVINSLQSMDGEGGRISIVISRETGDRSVRINVTDTGRGISADDI
                     SKIFEPYYSTKETGTGLGLAIVRKAIDDHGGSISVKSKEDEGTTFTIMLPSESRPVGI
                     ATGS"
     gene            5890..>6426
                     /locus_tag="VIT19_09735"
     CDS             5890..>6426
                     /locus_tag="VIT19_09735"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5839304.1"
                     /translation="MPRKSILVVDDDKPQRDILHDILTEAGYDVTSAASGEAALKFAK
                     ERDFDLALTDLKMTGMDGIELLQHLLTMNKSIIVILLTAHGTIESAKEALRRGAFDYL
                     QKPFDRDALLATIKRALGTLDQIDVEILSADPKMEAVKKMILKVARSSSTVLIRGESG
                     TGKELIARAIHNQSPRASE"
BASE COUNT         1300 a         1883 c         1819 g         1424 t
ORIGIN      
        1 tagaggttgc taacttgttg cgcaagctgc cccagcggtg cagcttcact ttgcttccat
       61 ctgttccaaa gctagttgcg cggcggccgc ttccgctgct ttgatcgttc gcccttcacc
      121 gcgcgccgag ccgccgtccc acttcaactc cacatgaaac gtccgatgat gcggcggccc
      181 gagcgtttcg atgaccgtgt attgcggcgc cggttcgtga ttcgcttgca gacgctcctg
      241 caacatcgtt ttgggatccg cggccgcggc ggcaacagga tcggcgcgcc gcaactcctc
      301 gccaagcgtt cgagttatga aatcctttgc ggccgacaac ccgccgtcca taaaaatcgc
      361 gccgatgaca gcctcgagaa cgtccgcgag cagggccccc ttgcgccggc ctccgctttt
      421 ttcttcgccg cgcccaaacc gcagaaattc gccgagccca agcgcctttg aagctttcgc
      481 tagcgtcggc gcgctcacca aacggtgctt cattcgcgac aactcgcctt cggtcgcgtg
      541 cggattcgcg cgaaacaagt agtccgccac cagcagaccc agcaccgagt cacccagaaa
      601 ttcgagcgct tcgttgtgca agcggcgcgc ctgcgttgcg gcgcgcgggg acacctgctc
      661 gtgtgcccac gaacgatgcg tcatcgcctg ggtgagcaaa tcgcgatctc gaaagtgata
      721 gccgatgacg tcttcgaggt ggtcgaggtt ttccaagagc gtgattctag caaaacgccg
      781 aacgcagcgt cgaagtgact ttgcgttcgg cgtgaagatt cggaagctta attgagtcta
      841 accgcgacga tgattagcgc gacgcggctt tggcttcggc gtggcggtcg gtttggctgg
      901 cgccgtggtc ggtgcagccg tgccgctcgg agcaggcttg gtcgtgctcg gcgcagcact
      961 tccggctcca ttggtccccg cgccggctga cgaaggtgca ccactcgtgg gcgccgcgcc
     1021 ggtgcctacc ggtgccggac cagccggcgt cggcaaggtc gttattggcg tcggagcatc
     1081 gggtaaaggc ctcgataaag ccgatgccac catagtgttc agttcgttct gggcaggatc
     1141 tttcttgtgg cgatccttgt acatggctgc aagtatgtcc aggaacgcct ttttgtctgc
     1201 ttcagcagta ctcaccgctg ctgcacgagc aaaggcatca atttgacgat caagcgcctg
     1261 gttcagattc gcgactacta atttggtttc tggatcatca actgactttc ctgctgccgc
     1321 aatcgccgcg taatctctgg cgtatttcgc aaccggacct tcgccgtacg ccgtggcgag
     1381 ttcgttatag accaccggac tcttttgaag gtcgctctgg tatttcgcag ccttaatgta
     1441 gaaaggaatc gcgtccgtcg gcgacgtctt catcgtcgat ttcgcaatca gatagttcat
     1501 cgcggccagc gcctggtccc tggttgtgta gcctgactta tcaaacgttt tgccggcttc
     1561 aaccaactcg atcgccttct tcgcggcctg cgccgattca gacaggagat tcggatcgcc
     1621 caatcccgcg cccgccatca gcaggtaaat cacggcgttg tcagcgtaag atggcatggc
     1681 caccaattgt tttcccagcc gattctgttc agcgtagttt ttcgccttga ccgccgcgtc
     1741 aaaatccgtc gcaagtttct ggttggaatg aagcttgtcg tagtccgcga tgaatttctt
     1801 cagcaccgct gagtactgat catcggtagt acaaaccgct acgtactctt tggccgctgc
     1861 atacgcggcg tcctggttgt ccttgcggtt gtcataccac ttggaatacg tggccgtctt
     1921 aaagtcgtca gtgcactctt ttgcctgcgc ccacgcggaa accgcagaca aggtgagcac
     1981 cgctacaagt attgttgctc gattaatgaa tttcattgaa gtatctaaag cctccgatcg
     2041 atccttttca atccgttttg aacctgtcga aacttatccg cgcaagtgtc ggccaataag
     2101 atgcgccttt cgacttgctc gttgtaacga agagcaactg cggtgccacg cagcgcgatg
     2161 aatcagggaa gattcattgg aacgagcggc aataatcctg caacacgcga gcggtgtcaa
     2221 gcgggaacac gcgcatattg gcgttgcctt cgaactgcat gaaaaatgcc gaactctcgc
     2281 aaaaaacgtg agttcggcat tgtcttgtcg actttgttgt tatgttaagg ctgcggctga
     2341 ggttgcggtt gaatgcggcg cgtccgaccg tccgtggcct ctttcggggt tgtcttcgcc
     2401 ggagtacccg ttttcggttt gttctcaacc ggcatggtcg tcgccttgat tttcaggtct
     2461 gggctcgtgg cgttgggcgc cgctgtctgc ggcgtgccat tcgcatccag ttcctcgccc
     2521 gcttcttcag cttcagtcgc cgctttcgtc tcggcagcct cctcgttcaa ggcagccttc
     2581 ccgtttgtgt tctgggtttc gtcatcagct tcggcgacct ggaaatcgat ctgcgtgccg
     2641 aaccgcggac ttaacgtgcg atagatgttg ccggcgatgg ccgccgcgtg tttgctgcga
     2701 cctgcggaac cgcgcgtaat caccacgact gccaacttcg gattaaccac cggcgcgtaa
     2761 gaggtgaaca gcccgatcca ggcgcgttcg tgctggtcaa tacaagttcc cgtctttccg
     2821 gcaaccgttt gctcgggacg ataggagcgg cggcctgtgc catagttcac tgcaccgatc
     2881 atgccgggca gcagccggtt gtatgtttcc ttctctacgc cgaccttgcg acgaacttca
     2941 gttttgaagt gagcagtttc ttcaatcgag cgcggcaggt gcggtacaag caatttcccg
     3001 ccgttcgcga ttgccgacac cattgttccc aactggatcg cggtaacttc gaagtcatcg
     3061 ccgtgtgaac tcatgcgatt cagcgcccag ccagacttga acaacggcac cttacccggt
     3121 gactcgtttg tgtaattgat gcccgtcttt tctcccaagc ccatttcccg ggcgtaagag
     3181 atcattttgt cgaatccgac ctggccgccg acgtgttgga aataggtgtt gttcgaatac
     3241 gccagggcat cggtgagatc cagccggtgg cggccaccgt cgctcaccgc ttcgaccggc
     3301 gcgataactt tctcgctaat gccggcgacg ccggtgacga gtttgatagt cgaacaaggt
     3361 ttgaatccac gccgcaggcc ccactcttga ttgaccaccg tgtacacgcg gcccgtcttg
     3421 ggatccatca cgactactgt cccagcggta ttaccgagtg ccgaaacagc tgcggcgcgg
     3481 acctccatgt cctcgcctat tgatgagtcg ttcgcgatgt tcgcctgagt ctcgcgacgg
     3541 aagccttcat cgatcgcacg ctggcgagcg atggcggcct ggcgagcagc ttccgcacgg
     3601 cgacgcgctt cttcaagcgc gcgacggcgg ctgccaccaa tgcgccgcga ctcagcggcc
     3661 agctcacgcc gggtcagttt gcggccaagt cgccgctgca acttggcgat atgtgcggct
     3721 tgctcgcgcg cagctcgggc tcgctcggcg cgcacttctc gccgcgagag ctgaactcgc
     3781 ccgcgccggc gactcgaacg cgccacctgc acgcgaccgc gccgattccg cgatgtccgc
     3841 gcactggcgc gcgcgcgtgt gctcttggaa gagcgcgcgg ctttcccttt actgcgtttt
     3901 cctttggcgg atgtttctac ggaaacagaa agaatgaagg cgaaaaaaat gaagaagacg
     3961 aaagataccc gtgcgacccg ggggaaaccc atttgattca tcagcaactc ctcgtgaaaa
     4021 cttacaaagt ccagttccgc tcgaggcgaa cccagtaaaa cttcgttgct tgattgcacg
     4081 tcgaggggcg acgtgcgcgt catgtttatg aactagaaac tctgaagggc gtttaagttc
     4141 ccgttcacgg ctgtcaaact ctgctcactc gcgccaactg aggtgtcggc tccacttgcg
     4201 accccgagtg gagagtttgc cttgaggtcg ggccaactat aacatcagcc cacaacaatc
     4261 ggcaacacaa aaaggacatg aatattggcg cactttcgcg atgcccatgg cctgcgtctt
     4321 gctagaaagc gatggctctg tcgagattac ttaatagttt ccgtgttcgg ctgcttttgc
     4381 tgctggctct gctgctggtc gtaaccgtaa gcgtgcagta ctacgtcaat ttgcgcgcgg
     4441 ttaggagcaa caagcagttc atcgtcgagc aacaacaggc gatcatggcg ggcgtcgcgc
     4501 tcggggttaa tagcattacc aacggcgagt ggctcgacga catgcgcaaa gaagccaact
     4561 cgcctctgtt tggcgaccgg gctgatcgcg tccaaaacgt cctaattgtc gatgaacacg
     4621 gctatgtgaa agatagtctg gaccaaaatc agataccggt gcagcttccg gataagtcgc
     4681 gtcggtacgt caatgtgaag gacattggcc ttccgccctt gaagagcgcg gtagacctgc
     4741 atgaattcaa tataccgctt ccgcaaggca tgaagagggc acctgcaggc ccccgattgg
     4801 atctaccggc tttttacttt ccagtggata cgaccagtgg gcggtactac gtaattgtgg
     4861 tacttggatc cgcgaacaac ctggcgacgg ggcttcagca acagtcgcgc cgttcgttgc
     4921 tctggacggt cgccgtactg ctggccatga cggctttgac ggccgtagtc gtctggcagt
     4981 tcacacggcc ggtcaaatct ctttcgaccg cggcgcgacg tgttgccggg ggggattttt
     5041 cttttcgggt gccgtcgaat ggccgccggg acgagatggg cgaactgacg gaattgttca
     5101 atgacatgac ggtgcaattg ggacgcacgc gcgaacttga ggcccaactg aacagcgctg
     5161 agaaagccgt cgtcgtgagc cgcctggcgt cggcaatcgc acacgagatc agaaacccgc
     5221 tgaactacat caacttgacg ctcgatcatc tgcgcacgag cttcgcgccg gccgatccgc
     5281 aaaagcagga aaagttcgac agcctgacaa gccaactaaa gactgaagtc gcacggatca
     5341 atcagcgcat caccgagttt ctgaactact cgcggccgcc gaagctcgag ccgcggcaac
     5401 tggacctcgg cgatctcgcg cacgatgcgc tgcgcacagt cgaagttcag gcttcggaaa
     5461 acaacgtcga actggtggtg gaagaggttg gcggaaaaca ttcagtcatg gctgacgctg
     5521 aatcgctgcg atcagcacta acgaacctgg tcatcaacag tcttcagtcc atggatggag
     5581 agggcggcag gatttcgatt gtaatctcgc gcgaaactgg cgaccgcagt gtgcggatta
     5641 acgtcacaga caccggccgc ggcatcagcg ccgacgacat ctcgaaaatt ttcgagccct
     5701 actattcgac gaaggagacc ggaaccgggt tgggcctcgc gattgtccgc aaggccattg
     5761 acgatcacgg cggatcgatt tccgtgaaat ctaaagaaga cgaagggacg acgtttacga
     5821 tcatgttgcc gtcagaatcc cggccggtcg ggatcgcgac gggatcatag ggaaactttg
     5881 tagaaaacca tgccacgcaa atcaatactt gtcgtcgatg acgacaaacc acaacgcgac
     5941 atcctccacg atattttaac cgaggccggc tacgacgtta cgtccgcggc ttccggcgaa
     6001 gctgcgctga agtttgcgaa agagcgcgac ttcgatctgg ccctgaccga cctgaagatg
     6061 accggcatgg acggcatcga gctgttgcag catctgctga ccatgaacaa gtcgatcatc
     6121 gtcatcctgc tgacggcgca tggcacgatt gagtctgcca aggaagcgct gcgtcgcggc
     6181 gccttcgatt acctgcagaa gcctttcgat cgcgatgcgc tgctggccac gatcaagcgc
     6241 gcgctcggaa cgctcgatca aatcgacgtc gaaattcttt ccgccgaccc caagatggaa
     6301 gcggtcaaga aaatgattct gaaagtcgcg cggtccagct cgaccgtttt gattcgcggc
     6361 gaatccggca ccggcaaaga gctgatagcc cgcgcgattc acaatcaatc tccgcgcgcg
     6421 tcggaa
//
LOCUS       DATDBY010000522         3746 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_860317, whole genome shotgun sequence.
ACCESSION   DATDBY010000522 DATDBY010000000
VERSION     DATDBY010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3746
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860317"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..2331)
                     /locus_tag="VIT19_09740"
     CDS             complement(34..2331)
                     /locus_tag="VIT19_09740"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839305.1"
                     /translation="MVLDKAKTLRAAEKYLESGKIAAAIKEYSQIVAVDADDFTALNM
                     LGDLYTRVGNTAEAIVCFHRIAEHYREQGFGLKAIAMYKKIDRLQPNDIEIATNLADL
                     YAQQDLIVEARAHYLAVVDAHNRAGAPQSALETLRKIADLDPQNTQIRTKLADGYLNL
                     GLKREAAECFAEAGQAMVARGACDEALEVFGRALVIQPDDYATLKGVLAAHSARGTAD
                     EAAELIEEALKSNPEDHELLSLLADAYFEAEEPEQAERATSSLVGSEPGSYLRFTEVA
                     RLYVRHGKIAEAVSVVAKITEQMLAERQQPQLLELIDELLASDADNVQALRLVARANW
                     WLRDMDGLKASLERLAEAAQAQDLNEDERYALTQLTRLDPAQEEHVARLNELGGAIEE
                     EVVDALPEFEVVSEREPEPVPSAEEFVSNSQEFAAGSDETAFEWNPVAEVSEDATAPA
                     DAEFETGFSFESIVAEELPTITSETATDQPAEDDRVAAMLRQELESVDFYIAQGYIDI
                     AIDTLELLEQQCGAHPDIISRREQINQLQTGAVPDTGASPVIEHGETMITSDLEIAPV
                     SPEPVPEIALDVPVAAAPDNGAEPVIMGIDAGLAEIFEEYRASSESEGEAAANGDYET
                     HYNLGLAYKDMDLFEDALEEFQMAANLTSPADGTGRYLQCCNLLGHCFVQTGAPEVAV
                     KWFAKGLSATHVSDEERMALTYEIGAAYEQAGDLHHALESFTEVYGNNVSYRNVNERV
                     KTLKTRLGEKSTITPPATRSEQLVN"
     gene            complement(2509..3333)
                     /locus_tag="VIT19_09745"
     CDS             complement(2509..3333)
                     /locus_tag="VIT19_09745"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5839306.1"
                     /translation="MISAQTARRAVWRPLWELPRRFDLIWSLAKRELAARYKGSVLGI
                     VWAVLTPVVMIAIFTLLFAGIFKAKFNASDSQWDFALYLFCGLLPWNAFQEALNMSAS
                     AVVNRANLVKRVVFPLETLPVSQTVAAIANQMFGTVALLLGILVIRHELHLTMLYLPI
                     LLIPQMLLMLGGAWLLASLGVFIRDIVQGISLVLMAWMYLTPIIYPETIVPEAYRPFL
                     NLNPFTPLIRSYRRIMLDGAAPDWAGLAYFFAFALIAFVFGYWWFARTRKNFADVV"
     gene            3480..>3746
                     /locus_tag="VIT19_09750"
     CDS             3480..>3746
                     /locus_tag="VIT19_09750"
                     /inference="COORDINATES: protein motif:HMM:NF017321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY5839307.1"
                     /translation="MANSATAGPLADRMRPQELSEFVGQEHLVGEGRVLRRLIEGGGT
                     LPSMIFWGPPGTGKTTLARLLADRTSANFVALSAVFSGVKELRGA"
BASE COUNT          801 a         1075 c         1040 g          830 t
ORIGIN      
        1 atgatgccga ataaatgccg gaaagagaaa tgctcagtta accagttgtt ctgatcgagt
       61 ggcgggcggc gtaatcgtgc tcttttcgcc gaggcgcgtc ttcaatgtct ttacgcgctc
      121 gttcacgttc cggtatgaaa cgttatttcc gtaaacttcg gtaaatgatt ccaaggcgtg
      181 atgcaaatcg ccggcttgtt cataagcagc cccgatttca tacgtcagcg ccatgcgctc
      241 ttcgtctgaa acgtgcgtgg cgctcaagcc tttcgcaaac catttgacgg ccacttcggg
      301 cgctccggtc tggacgaaac aatgtcccag caggttgcag cattgcaggt agcgccccgt
      361 gccgtctgcc ggcgacgtca gattcgcggc catctgaaat tcttcgagcg cgtcttcgaa
      421 caaatccatg tccttgtacg cgagtcccag attgtagtgc gtttcgtagt cgccatttgc
      481 agccgcctcg ccttcgcttt cgctcgacgc gcggtactcc tcaaagattt cagccaggcc
      541 tgcatcgata cccataatca cgggctcggc cccattatct ggcgcagcgg ctaccggcac
      601 atcgagtgca atttcaggca ctggctccgg tgacactggc gcgatttcga ggtcgcttgt
      661 gatcatcgtc tcgccgtgct cgataacagg cgatgcacct gtatccggaa ctgccccggt
      721 ctgaagctgg ttgatctgct cgcgacgcga aatgatgtcc gggtgggcgc cgcattgctg
      781 ctctagcaac tccagcgtat caatcgctat gtcgatgtag ccttgcgcga tgtagaaatc
      841 gacgctctcg agctcctgcc gcagcatcgc ggcgacacgg tcatcctcgg cgggttggtc
      901 ggtcgccgtt tcagacgtta tggtgggaag ttcttcggca acgatgctct cgaaactaaa
      961 gccggtttcg aactcggcat cggccggcgc cgttgcgtct tccgaaactt cggctactgg
     1021 gttccactca aaagctgttt cgtcactgcc cgcggcgaac tcctgcgagt tcgacacgaa
     1081 ctcttccgcg gatgggacgg gctccggctc gcgctcggaa actacttcga actcgggcaa
     1141 agcatcaacc acttcctctt cgatagcgcc gccgagttcg tttagccttg cgacatgttc
     1201 ctcctgggct ggatccaggc gcgtgagttg tgtcagagcg tagcgctcat cctcattgag
     1261 atcctgagcc tgtgcggctt ccgccagccg ctcgagcgag gccttaagtc cgtccatgtc
     1321 gcgcagccac cagttcgcgc gcgccaccag acgcaaggcc tgaacgttgt ccgcgtcgct
     1381 ggcgagcagc tcgtcaatca gctccaacaa ttgcggctgc tggcgttcgg ccagcatctg
     1441 ctcagtgatc ttggcaacga cgctcactgc ctcagcgatc ttgccgtgac gcacgtaaag
     1501 gcgggcgacc tccgtgaatc gtaagtacga acccggctcg ctcccgacta atgatgacgt
     1561 agcacgctca gcttgttccg gctcttccgc ttcgaaatac gcgtcggcca gtaacgacaa
     1621 caactcgtgg tcttcagggt tgctcttgag tgcttcctca atcagctccg cagcctcgtc
     1681 ggcggtgcca cgtgcgctgt gggccgcgag cacacctttg agcgtcgcat aatcatcggg
     1741 ctgaatcacc agggccctgc caaaaacttc cagggcttcg tcgcatgccc cgcgcgcgac
     1801 catcgcctgg ccagcttccg cgaaacattc ggccgcttct cttttcaatc ccaggttaag
     1861 gtagccgtcg gccagcttcg tgcgaatctg tgtgttctgc ggatcgaggt cggcaatctt
     1921 cctaagtgtt tccaacgcgc tttgcggtgc gcccgcgcgg ttgtgagcat cgacaactgc
     1981 gaggtaatgc gcgcgcgctt caacaatcag atcctgttgc gcgtagaggt cggccaggtt
     2041 cgtagcaatc tcgatatcat tcggctgtag gcgatcgatc ttcttgtaca tcgcgatcgc
     2101 ttttagacca aatccctgct cgcggtagtg ctcagcgata cgatgaaagc agactatcgc
     2161 ttcagccgta ttaccgacgc gcgtatacag atcgcctaac atgttgagcg cagtaaagtc
     2221 atccgcatca acagcaacga tctgagagta ttcttttatg gcagccgcga tctttcccga
     2281 ttcgagatac ttctcggctg cgcgcagagt ctttgctttg tcaagaacca tttgaaaccg
     2341 aaggactgga gactattgaa ctgtcgtgag ggtggagggc ttggagctag ccgtgaatca
     2401 cgccgcgtga agccctttgc ggcactacct aaactaacac ttcccaacgg ggggtgtcaa
     2461 cgatgttgtt cgccgaaaag ccaataaata cgggcgaaaa atgcatagtt acactacatc
     2521 tgcgaagttc ttgcgggtcc gcgcaaacca ccagtaacca aagacaaagg caataagcgc
     2581 aaaggcaaaa aaatatgcca gtcccgccca gtcgggggct gcgccatcaa gcatgatgcg
     2641 ccggtaactg cgaatgagcg gcgtaaatgg attgaggttg aggaagggac ggtaagcctc
     2701 aggcacgatc gtttcgggat aaatgattgg cgttaggtac atccaggcca tcagtacgag
     2761 gctgattccc tgcacgatgt cccgaatgaa gacgcccagc gacgccagaa gccacgcgcc
     2821 cccaagcatc aaaagcattt ggggaattaa gaggatgggc aagtaaagca ttgtcaggtg
     2881 cagttcatga cgaatcacca gaatgccaag taataaagcg accgtgccga acatttgatt
     2941 cgcgattgcc gccaccgttt gtgagaccgg caaagtttca agcgggaaga caacccgttt
     3001 gacgagattc gcgcgattaa ccaccgcact cgccgacatg ttgagggctt cctgaaaagc
     3061 attccagggc aagagaccac agaaaaggta cagcgcgaaa tcccactggg aatcgcttgc
     3121 gttgaatttg gctttgaaga ttcccgcgaa caggagagtg aagattgcga tcatcaccac
     3181 cggcgtcagt actgcccaga cgattccgag gaccgatcct ttgtagcgtg ctgccaactc
     3241 tcgcttcgcg agcgaccaaa ttagatcgaa tcgccgaggc aattcccaca gcggtcgcca
     3301 aacggcgcgt cgtgcagtct gagcggaaat cattcgcgat attgtaggtt gtcagcagaa
     3361 ggttgtcagg tgtgcgtcgg atcacgactt aactgcgcac tgtggtacgc tttttcaacg
     3421 caatgccaaa accgcgatct tcaagacttt tcccggaaat gtctgagccg aacaacacaa
     3481 tggcaaattc ggcaacggct ggtccgctcg cggatcgcat gcggccgcaa gagttgtcag
     3541 agtttgtcgg gcaggaacat ttagtcggtg aaggccgcgt cctgcgccgg ctgatcgaag
     3601 gcggcggcac actgccgtcg atgatctttt ggggtccgcc cggcactggt aagacgacgt
     3661 tggcgcggct gctggctgat cgaaccagcg ccaactttgt ggccttgtcc gcagtcttct
     3721 ctggcgtgaa agagttgcgc ggcgcg
//
LOCUS       DATDBY010000523         2760 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1858652, whole genome shotgun sequence.
ACCESSION   DATDBY010000523 DATDBY010000000
VERSION     DATDBY010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2760
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1858652"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /locus_tag="VIT19_09755"
     CDS             complement(<1..252)
                     /locus_tag="VIT19_09755"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEY5839308.1"
                     /translation="MATQVVMPKLSPTMEEGQVARWLKKEGDKVSMGEPIAEIDTDKA
                     TMEMQALSAGVLRKVLVQEGESAPLGQPIAIIGEPDEDIS"
     gene            complement(325..1305)
                     /locus_tag="VIT19_09760"
     CDS             complement(325..1305)
                     /locus_tag="VIT19_09760"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: protein motif:HMM:NF006667.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HEY5839309.1"
                     /translation="MAVITMRDALNDALREELARDPNVFLMGEEVAEYQGAYKVTRGL
                     FEEFGGKRVIDTPITELGFAGLGVGAAMVGLRPIIEFMTFNFSILAADQMVNSAAKML
                     YMSGGQYKIPIVFRGPGGSAYQVSSQHSQALESWYAYFPGLKVVMPSTPADAKGLLKS
                     AIRDDDPVIFIEQERMYGMKGEVPEDEDFTIPLGVADVKREGTDATIVARSLMVPTAL
                     KAAEELEKEGVNCEVIDPRTIRPLDIDTIITSVQKTNRVVVAEESHPFCGVAAEIAAQ
                     IQERAFDYLDAPVKRVSGVDVPTPYAKNLELLAFPGVPQIVAAVREVAYL"
     gene            complement(1312..2376)
                     /gene="pdhA"
                     /locus_tag="VIT19_09765"
     CDS             complement(1312..2376)
                     /gene="pdhA"
                     /locus_tag="VIT19_09765"
                     /inference="COORDINATES: protein motif:HMM:TIGR03182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEY5839310.1"
                     /translation="MSSQTTDRRQNANATASVIDQPTTTRDGAGALTEDRDTLVKLFH
                     QMLLIRRFEEKCAESYSLGKIGGFCHLYIGQEAVGVGAISALRTDDYVITSYREHGQA
                     LAKGMSPDAVMAELYGKATGCSKGKGGSMHLFDASVNFLGGHAIVGGQIPLATGAAFA
                     SKYKETDQVTVCFFGEAAVNQGAFHESLNMAQLWRLPCIYLCENNMYGMGTSAQRAMS
                     FQDIAGKACAYELASEVVDGMDVMAMREATQRAVERARKESLPTLLEARTYRYMGHSM
                     SDPGKYRTRAEIEKYQERDPIKLFRARLEENGMLTDDDVAAMEAEVREQVEQAVQFAE
                     ESPEPAPEELMTNVYASPLR"
     gene            complement(2512..>2760)
                     /locus_tag="VIT19_09770"
     CDS             complement(2512..>2760)
                     /locus_tag="VIT19_09770"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF013180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEY5839311.1"
                     /translation="AMAEAAADRIRNAVQQQKFSVRTGKYVEVGLSAGIACFPVDGET
                     SEELLTTAARNMQKDKHARKNLLSLTTMPTHAGIDQYT"
BASE COUNT          551 a          857 c          747 g          605 t
ORIGIN      
        1 tgagatgtct tcgtcaggct cgccgatgat cgcgatgggc tgacccagtg gcgcgctctc
       61 gccttcctgg acaagcacct tacgcaaaac gccggccgac agcgcctgca tctccatggt
      121 ggctttgtca gtatcgattt cggcgattgg ctcgcccatc gagaccttgt cgccttcttt
      181 tttcagccag cgcgcaacct gcccctcttc catggtgggc gacagtttcg gcatgacgac
      241 ttgtgtagcc atttggtcag tggtcagtgg tcagtggtca gtggtcagtt gcgaactaca
      301 actgacaacg gacaactgac cgttctacaa gtaagcaact tctctaaccg cggcgacgat
      361 ctgcggcact cccggaaacg cgagcagttc gaggttcttc gcgtaaggcg tcggcacatc
      421 cacgccggaa actcgcttca cgggagcatc aagataatcg aacgcccgct cttgaatctg
      481 agccgcaatc tcggcggcaa cgccgcagaa cggatgcgac tcctcggcaa cgacgacacg
      541 attcgtcttc tgcacggaag tgatgatcgt atcgatgtcg agcggccgga tcgtgcgcgg
      601 atcgatcact tcgcagttga ccccctcttt ctccagctcc tctgccgctt tcaaagccgt
      661 cggcaccatc aacgagcgcg cgacgatcgt ggcgtcggtt ccctcccgct ttacatcggc
      721 gacaccgagc ggaatcgtga agtcttcgtc ttccggaacc tcgcctttca ttccgtacat
      781 gcgctcctgc tcgatgaaga tcaccggatc gtcgtcgcga atcgcactct tcagaagtcc
      841 tttggcatcg gccggcgttg aaggcatcac gactttcaaa ccgggaaagt acgcgtacca
      901 cgattccaaa gcctgcgagt gctgcgaaga aacctggtag gccgacccac ccggaccgcg
      961 aaacacgatc ggaatcttgt attggccccc cgacatgtaa agcatcttgg cggccgagtt
     1021 caccatttga tccgcagcga gaatcgaaaa gttgaaagtc atgaactcga tgatgggccg
     1081 caggccgacc atcgccgcgc ccacgccaag accggcgaaa cccagttcag tgatgggcgt
     1141 atcgatgacc cgcttgccac cgaactcttc aaacaatccg cgggtaactt tgtaggcgcc
     1201 ctggtattca gcgacctctt cacccatcag aaacacattt ggatcgcgcg ccagctcctc
     1261 gcggagagcg tcgttcaagg cgtcgcgcat tgtgattaca gccattggat tctagcgcag
     1321 cggactcgcg taaacgttcg tcatcaattc ttccggcgcg ggctcaggac tctcttccgc
     1381 aaactgaact gcctgctcaa cctgctcgcg cacttcggct tccatcgcgg ccacgtcatc
     1441 gtcagtcaac attccgttct cttccagccg ggcccggaaa agcttgatcg gatctcgctc
     1501 ctgatacttt tcaatctcag cgcgcgtccg gtacttgccc ggatcggaca tcgagtggcc
     1561 catgtaacga taggttcttg cttcaagcag tgtcggcaaa gactctttcc gcgctcgctc
     1621 gaccgcccgc tgcgtcgcct cgcgcatggc catgacatcc atgccatcaa caacttcaga
     1681 ggcaagttcg tacgcacatg ccttcccggc aatgtcttgg aaagacatcg ctcgctgcgc
     1741 cgaggtgccc atcccgtaca tgttgttctc acagaggtag atgcatggca gccgccagag
     1801 ctgcgccatg ttcagcgact cgtggaacgc accctgattg acggccgcct cgccgaagaa
     1861 gcaaaccgta acttgatcag tttccttgta tttagaagcg aaggccgcgc cggtggccag
     1921 aggaatctgc ccgccgacaa tcgcgtgacc gccgagaaag ttcacgctcg cgtcgaacaa
     1981 gtgcatcgag ccgcctttcc ctttcgagca gcccgtggct ttgccgtaga gttcggccat
     2041 gaccgcatca ggcgacatgc ctttcgccag ggcctggccg tgctcccgat aactcgtgat
     2101 gacgtaatcg tctgttcgga gagccgagat ggcgcctacg ccgaccgcct cctggccaat
     2161 gtacagatgg cagaagccgc caatttttcc aaggctgtac gactcagcgc acttctcttc
     2221 aaagcgccga atcaacagca tctggtggaa tagcttgacc agcgtatcgc gatcttcggt
     2281 cagcgctccc gcgccatcgc gcgtggttgt cggttgatcg atgacgctag cggtagcgtt
     2341 cgcgttctgt cgccggtcag tcgtctggct gctcatgctt cgctgctcgc ttagtgcgaa
     2401 tcggccagct atgagctggc cgtgcacata cttgcggagt tcgacacgat tatacgcgac
     2461 acttgcatcg aggcaagtgc acgaatgtcg gaatgctaaa gcagggcgag attaagtgta
     2521 ttgatcgatt cctgcgtgcg tcggcatcgt cgtcaggctg agcagattct tgcgcgcatg
     2581 cttgtctttc tgcatgttgc gagcggccgt ggtgagcagc tcttcgctcg tttcgccgtc
     2641 cacggggaaa caagcaatgc ccgcgctgag cccaacttca acgtacttgc cagtgcgcac
     2701 ggaaaacttt tgctgctgga ctgcgttgcg aatgcgatcg gcagcggctt cagccatggc
//
LOCUS       DATDBY010000524         3428 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_449907, whole genome shotgun sequence.
ACCESSION   DATDBY010000524 DATDBY010000000
VERSION     DATDBY010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3428
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449907"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..433
                     /locus_tag="VIT19_09775"
     CDS             <1..433
                     /locus_tag="VIT19_09775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839312.1"
                     /translation="IGQVAPAFWSFCGFIPDAARFVEQTIPQLLDRLNRYDVQAALLI
                     PASRLCHQSVALAARAIEQTGVPTMCLSVDREALNSVRPPRAGYYEGRFGSVAGEPNG
                     PEHQRRVLDEALRWFEPMGQPGIRKLAVELQTKVQAARGER"
     gene            549..1622
                     /locus_tag="VIT19_09780"
     CDS             549..1622
                     /locus_tag="VIT19_09780"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEY5839313.1"
                     /translation="MKRIILRLLITATLGILGYLLLWPVPIDPVAWDPPPAPDLTGVY
                     AQNNELAKTVRLAVNHQAPEDVAFDKQDRIYTGADDGYIYRLQPDGTAPEAFTRTYGR
                     PLGLAFDGAGNLIVADADRGLMSVAPDGNITLLSNQSDGVPFRCTNDLDIAADGTIYF
                     TDASYKFPLKELKADLFEHRPNGRLLAFDPKTGQTRTVLRDLHFANGVAVSPDQSFVL
                     VNETGTYAIKRVWLKGEKQGQAETFIDNLPGFPDGIMSNGRDMFWLAIVNRRDEKLDS
                     LLRRPFLRKVVMRLPNFLQPNIKRYGFVLGLDMNGKVVRNLQDASPEGFAQIANVVEH
                     KGNLYFGSIGENAIGRFPLTPSQ"
     gene            complement(1774..2748)
                     /locus_tag="VIT19_09785"
     CDS             complement(1774..2748)
                     /locus_tag="VIT19_09785"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY5839314.1"
                     /translation="MSKLKIGFLGAGYIAGVHASILARDERVQIAAVHDVVKNRAKQL
                     ASSAGAQVAHSVAEVLALCDTIYITTPNTQHTELAVLAVEERKHVFCEKPMATSIADA
                     QRVLKAVQDCQTVFQVGHNRRFAPVYAELKRMLTETHRPHSAHIKMNRGELLKPEWVG
                     APKITGGFLYETTIHMFDMMRFLFGEVKTLQAVGSKHEYEETDDFSVLLTFENGMHAT
                     LASSADASWLFPFERVEVFCHHATLVTREMESLICSEGLEGKHSEYSTHQFSKEEKWG
                     YAQENRAFIDSIMNDKPPAVTADDGYKSVELVNAVYDSVKTGNSIVFE"
     gene            complement(2888..>3428)
                     /locus_tag="VIT19_09790"
     CDS             complement(2888..>3428)
                     /locus_tag="VIT19_09790"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEY5839315.1"
                     /translation="CPYVVVVPGKIPPGGLSSYEVIEESVTVLRELAAIGERHGVALA
                     FEFLGQKDCSVQTLDVANEIVEKTNRRNIGLVIDSFHFYTGGSTTRMIDVLDAKRLFI
                     FHIDDAEDLPRDQLTDAHRLLPGLGILPLKEIIAAFKRIGYDANASVEIFRPEYWERD
                     PFELAREAKAAVEKVLSEV"
BASE COUNT          711 a         1011 c          947 g          759 t
ORIGIN      
        1 catcggccag gtcgcgccgg cattctggag tttctgtggg ttcattcccg acgccgcgcg
       61 tttcgttgag cagacgattc cgcagttgct cgatcggctg aatcgttatg acgtgcaggc
      121 cgcgctgctg attccggcat cacgcctctg ccatcaatcc gttgcattgg ccgcgcgcgc
      181 gattgaacag accggcgtac cgacaatgtg cctgtcagtt gatcgcgagg cgctgaacag
      241 cgttcgcccg ccccgcgccg gttattacga aggtcgcttt ggcagtgtcg ccggcgaacc
      301 aaacgggccg gaacatcagc ggcgcgtact tgacgaggcc ctgcgctggt tcgaaccgat
      361 gggtcaaccc ggcattcgca aactcgccgt cgagcttcaa acgaaagttc aagccgcgcg
      421 cggggaacgc taaacaagtg atgagtcatg agtgatgagt catggtcgag aactcgatgc
      481 taatcactct tctactcact gctgatcagc actcattact catcacccat tactcatcac
      541 tgtcgtaaat gaaacgcatc attcttcgtc tgctgatcac cgccaccctc gggatccttg
      601 ggtatctttt gctgtggccg gtgccgatcg acccggttgc ctgggacccg ccgcccgcgc
      661 ctgatctcac cggcgtttac gcgcaaaaca atgaactcgc gaaaacggtt cggctcgcag
      721 tcaatcatca agcgcccgaa gacgtcgcgt tcgacaaaca ggatcgcatc tataccggcg
      781 cagacgacgg atacatttac cggctgcaac ctgacggcac ggcgccagag gccttcaccc
      841 gtacgtacgg ccggccgctc ggtctggcgt tcgacggagc cggaaatttg atcgtggctg
      901 acgctgacag gggattgatg tcggttgcgc ctgatggaaa cattacgctt ttgagtaatc
      961 aatcggacgg cgtgcctttt cgttgcacta acgatctgga catcgccgcc gacgggacca
     1021 tctatttcac cgacgcgtct tacaagttcc cgctgaaaga actaaaagct gacctcttcg
     1081 agcaccggcc gaacgggcgc ttgctcgcat tcgatccgaa gacgggacag acgcgcacgg
     1141 ttctccgcga tttgcacttt gccaatggcg tggctgtgag tcccgatcaa tcgttcgtgt
     1201 tggtcaacga aaccggaaca tacgcaatca agcgtgtctg gttgaagggc gagaagcagg
     1261 gccaggcgga aacctttatc gataatcttc ccggcttccc tgacggcatt atgtcgaatg
     1321 gccgcgacat gttctggctg gcgatcgtga accggcgcga tgagaagttg gactcgctgc
     1381 tgcggcgacc gtttctgcgc aaggtcgtca tgcgtttgcc aaattttctt cagcccaata
     1441 tcaagcgata cggattcgtg ctcgggctcg acatgaacgg caaagtagtg cgcaatcttc
     1501 aggacgcttc gcccgaaggt ttcgcgcaaa tcgcgaatgt ggtcgaacac aaggggaact
     1561 tgtacttcgg cagcatcggc gagaacgcca tcggccgctt tccgctcacg ccgtcgcagt
     1621 aaacggcaaa atttttggag tgcgctggca gagcaaccgg ggtccccggc gcggcagccg
     1681 cgctggggtg gtcgtagcgg cgacagcgct ttggatcgag ttctgtgata atccaaagcg
     1741 gcgtcgcgct aacgcttgcc gccgcactcc aaattactcg aacacgatcg aatttccggt
     1801 cttaaccgaa tcgtagaccg cattcaccaa ttccaccgac ttgtagccat catcggctgt
     1861 taccgccggc ggcttgtcgt tcatgatcga atcgataaac gcccggttct cctgcgcgta
     1921 gccccatttt tcctctttcg aaaactgatg cgttgaatac tcagagtgct tgccttccag
     1981 accttcgctg caaatcagac tttccatctc tcgcgtcacg agggtcgcgt gatgacagaa
     2041 gacctcgacg cgctcaaatg gaaacagcca actggcgtcg gccgaagagg cgagcgtcgc
     2101 atgcattccg ttttcaaagg tcagcagcac tgagaagtcg tccgtctctt cgtactcgtg
     2161 ctttgagccg acagcttgca acgtcttcac ttcgccaaac aggaaccgca tcatgtcgaa
     2221 catgtgaatc gtcgtctcgt aaagaaagcc gccggtgatt ttcggagcgc cgacccattc
     2281 cggtttgagc aactcgccgc gattcatctt gatgtgcgcc gaatgcggcc gatgggtttc
     2341 cgtcagcatt cgtttcagtt cagcgtacac cggtgcgaaa cggcgattgt gacctacttg
     2401 aaataccgtc tggcagtctt gaacggcttt caagacgcgt tgcgcatctg cgatgctcgt
     2461 cgccatcggc ttttcgcaga agacgtgctt gcgttcttca accgcgagaa ccgcaagttc
     2521 ggtgtgttgc gtgttgggcg tggtgatgta gatcgtgtcg cacaacgcca gtacttcggc
     2581 gacgctgtgc gcgacctgcg cgccggcgga cgacgcgagt tgcttcgcgc gattcttgac
     2641 gacgtcgtgg accgcggcaa tctgcacgcg ctcatcccgc gcgagaatcg acgcgtgcac
     2701 gcccgcgatg taaccggcgc cgagaaaacc aattttgagt ttggacatag gagactatcc
     2761 gcagatagtg aggtcagtac cgggagcggt agcgaccggg taacgttcta gcctgactga
     2821 ccttggttgt gcgtccgacc cggtcgctac cgctcccggt actgacctca tctgcgtaat
     2881 ctgtggatca aacttctgag agcactttct caaccgccgc ctttgcctcg cgcgccaact
     2941 caaacggatc gcgctcccag tattccggcc gaaagatttc gacactagcg ttggcgtcgt
     3001 agccgattcg tttgaaggcg gcgatgattt ctttcaaagg caaaattccc aggcccggca
     3061 acaaacgatg cgcgtcggta agctggtccc ttggcagatc ttcggcgtcg tcaatgtgaa
     3121 agatgaacag acgcttggca tccagaacat cgatcatgcg agtggtcgag ccgccggtgt
     3181 agaaatgaaa actatcgatg accagaccga tgttgcggcg attcgttttt tcgactattt
     3241 cgttggcgac gtcgagtgtc tgaacgctgc aatctttctg ccccagaaat tcaaacgcga
     3301 gcgccacgcc gtgtctttct ccgatcgcgg ccagctctct cagcaccgtc acggactcct
     3361 cgatcacttc atagctgctc aagccgcccg gcggaatctt acccggcaca accaccacat
     3421 aagggcac
//
LOCUS       DATDBY010000525         4659 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2908473, whole genome shotgun sequence.
ACCESSION   DATDBY010000525 DATDBY010000000
VERSION     DATDBY010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4659
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2908473"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2523
                     /locus_tag="VIT19_09795"
     CDS             <1..2523
                     /locus_tag="VIT19_09795"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HEY5839316.1"
                     /translation="HVCFADDVAYCPDDGAATGPSIAGEPILDGRYNLERRLGQGGMG
                     IVYKGRHIFLKTQHAIKIILPDLVGNDPNLVTRFRQEALAAAAIRHQNIIAVTDFGVV
                     RSTMPFLVMEFVQGKSLQEVMAAEGAMGPVRAFEIMQPICAGIAAAHRQNIVHRDIKP
                     LNIMLQDGLTIAEGTKILDFGLAKIKSGELLGSFVAAQTTGLMGSPFYMAPEQWSDDP
                     PDARADVYSLGVMLYQMLAGEVPFKANAIPAIMKKHLTEEPPPFSSRGIEVPPQIEAV
                     VRHALEKEPEHRTPSADDFLEEFRQAMEAASALLKNTGEARQPDPYQTLVTGPPPATD
                     PQVGRSSYSRPTEDLIAAAISSKSWMEEQDKLSAAREELAREEEGRRQLAAEAERKRK
                     EDAARQEFDRLQQLKQKQEAERVEAERLAAEQRAAEEREREAQRVRDEEARQLREVED
                     ARRQEEQRLEEARRKEEQRLDEERRREEERQRVEELVAQQTKAIEEKLTKLASSIPPA
                     PAAVVTAEATNVRPVGATTVTENSYPALLNVPPAAVAGTRNVLPYVLAGVLSLVLVGG
                     GIGAWVMWPKPTPGIVSNRGDTGAAGDTGAQSDTNPNPGPAPVTFTPEFISVPGGTFD
                     MGRNGATVAEVPIHAASVKPLVIDKHEVTNYEYQQFVEKTGHEAPSHWINKKPIAGQE
                     LLPVTFVSHSDAVAFAKWRSERDGLNWRLPTEEEWEYAARGGDQENIYPWGNTWADGY
                     AITKSSGATAPKAVGSAPNDKTRWGVMDMLGNVYEWTATKASYYAGSNKQVKGEELNW
                     YVIRGASFGTAQAPKPISATRRDWVDGNTKVGAIGFRLVRPQ"
     gene            2686..3924
                     /locus_tag="VIT19_09800"
     CDS             2686..3924
                     /locus_tag="VIT19_09800"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839317.1"
                     /translation="MNKSSIAFSKVRISALIKASLALACLVFASGAVLAQETGGELGG
                     GAGIFRPKNPEAKRSGNPARPPRPRMSPAEIEARFQDALADGNDERDARKFVQAEAAY
                     RRALVLKPRDSRAHYAIGNVLVDQQRWDDAEVSYRKAFDTAATNPEVLMALSFVLVQP
                     RTGALNAKRFTDAEYFARRATQLAPTNAIAFDRLGVAMTARGIYNADAESAFRRATEL
                     DPNFVVAQVHLAGVLARMKRWDEADALFRSAGAKAQDAATLVLIADALQAQQRWNDSE
                     PVLRRALALDARNPGALFLMGRLHSVNQRYAEAAAILKTAAEVNAKSFIVRTVLARAY
                     LGAGSYDDAFRTYEEAAALASAADRKALAGQFGLTGVGDGYMTAGRARDALRAYQRGL
                     ELDPTNAELPAKIAAARARS"
     gene            4008..>4659
                     /locus_tag="VIT19_09805"
     CDS             4008..>4659
                     /locus_tag="VIT19_09805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839318.1"
                     /translation="MRRCPKCNRTYSTDTQKFCTHDGGLLFTLQQELNETVQFDSSKV
                     RDAVAKSTTRDLSEQQAAAFDPEATIVRSAVNDGTQQVKARDTGSLEPPSQTQYYGAP
                     PSEPSTGPVAPPPVTPSGPIPPPPTSAPLPPPQQASGPIPPPPQAQAAAAAHAGQPFP
                     PVAPKKKSKLPMILGILAVVIVLFIGAAVVVGFFVWRNQRPEAAGADRPTSTQPGSS"
BASE COUNT          996 a         1367 c         1494 g          802 t
ORIGIN      
        1 cacgtctgtt ttgccgacga cgtggcttat tgtcctgatg acggcgccgc gacgggtccg
       61 tccatcgccg gcgaaccgat ccttgacggc cgctacaacc ttgagcggcg gctgggccag
      121 ggcggcatgg gcattgttta caaaggccgg cacatctttc tcaagaccca gcacgcaatc
      181 aagatcattc ttcccgatct ggtcggcaac gatccaaatc tcgtaacgcg ctttcggcag
      241 gaagctttgg ccgccgcggc gattcgtcat cagaacatca ttgcggtcac ggactttgga
      301 gtcgtgcgca gcacgatgcc ctttctcgtg atggagttcg tgcagggcaa atctctgcag
      361 gaagtgatgg ccgcagaggg agcgatgggg ccagtgcgcg cctttgaaat catgcagccg
      421 atctgcgccg gcatcgctgc ggcccatcgg caaaacattg tgcaccgcga catcaagccc
      481 ctgaacatca tgcttcagga cgggctcacg attgcggaag gcacaaagat tctcgacttc
      541 ggtctcgcga agattaagtc cggtgaattg ctgggttcgt ttgtcgccgc gcagacgacg
      601 ggattgatgg gctcgccgtt ttatatggcg cccgagcaat ggtcggacga tccgcccgac
      661 gcgcgcgctg atgtgtacag cctcggcgtg atgctctatc aaatgctcgc cggtgaggtg
      721 ccgttcaaag cgaacgcgat tccggcgatc atgaagaagc acctgaccga ggaaccgccg
      781 ccgttttcgt cgcgcggtat agaggtgccg ccgcagatcg aagcggtcgt gcgtcacgcg
      841 ctcgagaaag agccggagca tcgaacgcca tccgccgatg acttccttga agagtttcgc
      901 caggcgatgg aagccgcgag cgcgctgctg aaaaacacgg gcgaagcgcg acagccggat
      961 ccttaccaga cgctggtgac agggccgccg cccgcgacgg atccgcaggt tggcaggtcg
     1021 agttactcgc gtcccaccga agatttgatc gcggccgcca tcagcagcaa gtcctggatg
     1081 gaagaacagg acaagttgag cgcggcgcgc gaggaactgg cccgcgaaga agaagggcga
     1141 agacaactcg cggccgaggc cgagcgcaag cgaaaagaag acgcagcccg gcaggagttc
     1201 gaccggctac agcagctcaa acaaaagcag gaagcagagc gggtcgaagc agagcgcctc
     1261 gccgcagagc agcgcgccgc ggaagagcgc gagcgcgaag cacaacgtgt gcgggatgaa
     1321 gaagcccgac agcttcggga agtagaagat gcgcgtcgcc aggaagaaca acggctggag
     1381 gaagcgcgtc gcaaagagga gcaacgcctc gacgaagagc ggcggcgcga agaagaacgc
     1441 caacgcgtcg aagagttggt cgcgcagcag acgaaagcta tcgaagagaa gctgacgaaa
     1501 ctcgcgtcga gtattccgcc ggccccggcc gccgtggtca ctgcggaagc gacaaacgta
     1561 cgaccagtgg gcgctacgac tgttaccgag aatagctatc cggctttgct caatgtgccg
     1621 ccggcggcgg ttgccggtac gcgaaacgtc ttgccgtacg tgctggcggg tgttttgtcg
     1681 ctcgtgctgg tcggtggtgg aatcggcgcc tgggtgatgt ggccaaaacc tacaccggga
     1741 atcgttagca atcgtggaga tactggagct gcgggggata ccggggccca gagcgatacc
     1801 aaccctaatc cgggaccagc gcccgtcacc ttcacgcccg aatttatttc ggttccgggc
     1861 ggaacgttcg acatgggccg caacggcgcg acggtagccg aggttcccat ccacgccgct
     1921 tctgtgaagc cgctggtgat cgacaagcac gaagtgacca attacgagta tcagcagttc
     1981 gtcgaaaaga caggtcacga agcaccatcg cactggatca ataagaaacc gattgcgggt
     2041 caggaattgc tgccggtcac ctttgtctcg cacagcgatg cggtggcgtt cgccaagtgg
     2101 cgatccgaac gcgatggctt gaactggcgg ctgccgacgg aagaagaatg ggaatacgcc
     2161 gcgcgcggtg gcgatcagga aaacatctat ccctggggaa acacgtgggc ggatggttac
     2221 gcgatcacca aaagttcagg cgctacggcg ccgaaggccg tcgggtccgc gccgaatgac
     2281 aaaacgcgct ggggcgtgat ggacatgttg ggtaacgtct acgaatggac cgcgacaaag
     2341 gctagttatt acgccggcag caacaaacag gtcaaaggcg aggagctcaa ctggtatgtc
     2401 attcggggcg cgtcattcgg tacggcgcag gcaccgaagc caatctcggc cacgcgacgc
     2461 gattgggtcg atggcaatac caaggtgggc gcgatcgggt ttcgtctggt gcgcccgcag
     2521 tgaacttggg tgataggtac gcacgcctct ggcgtgctgc acgcgtgacg cgtgcttacc
     2581 gctagtgggc gcactgcacg ccacgaccgg cgtacctact tgagcctcgc tacctcaccg
     2641 agtattatca cccgcaaaaa tccggagacc ctgagtctta ataacatgaa caaatcctcg
     2701 attgcgtttt caaaagtgag aattagcgcg cttatcaaag cgtcgctggc gttagcctgc
     2761 ctggtctttg cgtcgggtgc ggtactggcc caggagaccg gcggcgagtt gggcggcggc
     2821 gccggcatct tccggccgaa gaatcccgaa gccaaacgga gcggcaatcc ggctcgtccg
     2881 ccgaggccgc ggatgagtcc ggccgagatc gaagcgcgat ttcaggacgc gctcgccgat
     2941 ggcaacgatg agcgtgacgc gcgcaagttc gtccaggccg aagcggctta ccgaagggcc
     3001 ctggtgttga agccacgcga ttcgcgcgcg cactacgcga tcggaaatgt cctggtcgat
     3061 cagcagcgct gggacgatgc tgaagtgtcg taccggaaag ccttcgacac ggcggcgacg
     3121 aatcctgagg ttctgatggc tttgagcttt gtgctggtgc agccgcgaac cggcgcgctg
     3181 aatgcaaagc gatttaccga tgccgagtac tttgcacggc gcgcgacgca actggcgcca
     3241 accaacgcga tcgctttcga tcgtttgggg gtcgcgatga ccgcgcgcgg catttacaac
     3301 gccgacgctg aaagtgcgtt ccggcgcgcg acggaactgg atccgaattt tgtcgtggcg
     3361 caggtccacc tcgcgggcgt gctggcgcgg atgaagcgat gggatgaagc cgatgcgctc
     3421 tttcgctcgg ccggggccaa agcgcaggac gcggcgactc tcgtgctgat tgcggatgca
     3481 ctgcaagccc aacaacgctg gaatgattcc gagccggtgc tgcggcgcgc gcttgcgttg
     3541 gacgcgagaa atccgggggc cttgttcctg atgggccggt tgcattcagt caatcagcgc
     3601 tatgcggaag cggcggcgat tttgaagact gccgctgaag tgaatgcgaa gagttttatc
     3661 gtgcgcacag ttctggcgcg cgcatacctg ggcgcgggct cttatgacga cgcgttcaga
     3721 acctatgaag aagcagccgc gctggcctct gccgctgatc gcaaagcgct cgccggccag
     3781 ttcgggctca ccggcgtcgg cgatggatac atgaccgctg ggcgagcccg cgacgcgctg
     3841 cgcgcctatc aaaggggcct cgagttagac ccaacgaatg cagagttgcc ggcgaagatc
     3901 gccgccgcgc gcgcgagatc gtagaacttt tagatgcagc gcaagctggc agcttgcgcc
     3961 ctcgcaagtt aacaacttgc gttacaaaac cctgagacaa aacagatatg agacgttgcc
     4021 caaaatgtaa ccgcacttat tcaaccgata cgcagaagtt ctgcacccac gacggcggct
     4081 tgttgtttac cctgcaacaa gagctgaacg agacggtaca gttcgattcg tccaaagttc
     4141 gcgacgccgt cgccaaatcg acgacccgcg atctcagtga gcaacaggct gccgcattcg
     4201 atcccgaagc gacgatagtc aggagcgccg tcaacgacgg cacgcagcag gtgaaggcgc
     4261 gcgataccgg cagtctcgag ccgccgtcgc agacgcaata ctatggcgcg ccaccgagcg
     4321 agccaagcac aggaccagta gcgccgccac ccgtaacgcc ctcaggtccc attccaccgc
     4381 cgccaacatc agctcccttg ccgccgccgc agcaggcgtc cggcccgatt ccgccgccac
     4441 cgcaagcgca ggccgccgct gccgctcatg ctggtcagcc ttttccgccg gtggcgccaa
     4501 agaagaaatc gaagctgccg atgatccttg gcatcctggc cgtggtcatc gtgctgttca
     4561 taggcgctgc ggttgtcgtt ggtttctttg tctggcgcaa tcagcggccg gaagcggcag
     4621 gggcagatcg gccgacaagc actcaacccg gttccagcg
//
LOCUS       DATDBY010000526         4139 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1882314, whole genome shotgun sequence.
ACCESSION   DATDBY010000526 DATDBY010000000
VERSION     DATDBY010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4139
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1882314"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(385..1194)
                     /locus_tag="VIT19_09810"
     CDS             complement(385..1194)
                     /locus_tag="VIT19_09810"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5839319.1"
                     /translation="MTEAAAQTQMEHAPGTFSWIELATTDGPGAKKFYTDLFGWEIQD
                     NPMGPDMVYTIYKINGKDVAASYQKGPEMEQVPTHWACYVAVESADETAAKAKSLGGT
                     VVQEPFDVMDHGRMAAITDPTGATFCIWQPNQHKGVGIKNENNSLCWNELMTKDSERA
                     KDFYTKLFGWKSKTDGDKGMPYTEWINGEEHIGGMMQIQPDMGPMPPNWGVYFAVDDC
                     DAMVEKATSLGGRTYMPPTDIPNVGRFAVLADPQGAAFNIIKLDMQHNQNK"
     gene            complement(2279..2500)
                     /locus_tag="VIT19_09815"
     CDS             complement(2279..2500)
                     /locus_tag="VIT19_09815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839320.1"
                     /translation="MQNKTMEIVFSVYQETDGGFVAECLSHDIFTQGNSWDELRSNVQ
                     EAVTGYFFDQPKPERIRLHLVRDEVLACA"
     gene            complement(2531..3100)
                     /locus_tag="VIT19_09820"
     CDS             complement(2531..3100)
                     /locus_tag="VIT19_09820"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005934810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEY5839321.1"
                     /translation="MNSPVTPARCQWAKTPLSIEYHDREWGVPVHDERTLFEFLILEG
                     AQAGLSWETILRKRENYRRAFDNFDARKVGKYDQRKVEKLLSDEGIIRNRLKIAAAIQ
                     NAQAFLAVQKEFGSFDAYVWRFVNGKPLRRKRGAPVPVTTTTSEALSRDLLNRGFKFV
                     GPTICYSFMQAVGMVNDHDVNCFRHQQIT"
     gene            complement(3170..>4139)
                     /locus_tag="VIT19_09825"
     CDS             complement(3170..>4139)
                     /locus_tag="VIT19_09825"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5839322.1"
                     /translation="EDLVDISRIVGGKLNLEVVPTELMPIVDASIEVVRPAADAKEIT
                     IDVNYDARVGPVAGDASRLQQIIWNLLSNAVKFTPKGGKVSIDFRRQNGFAEVVISDT
                     GIGISPDFLPHVFERFRQAESTATRSHRGMGLGLAIVRHLIELHGGTVTAASDGENRG
                     STFTIHLPLAAIEKGLASRAESQTTNGDHGHELKGLRILLVEDEPDARELIAMVLQSS
                     GAQVEAVDTAKGAFESLSLSAPDVLVSDIGLPLESGYDLIRKVRAMTSDTRELPAIAL
                     TAFATENDRKLSLSAGFQAHLAKPVEPGDLLKVIKGVINGKHHSRQ"
BASE COUNT          881 a         1156 c         1117 g          985 t
ORIGIN      
        1 tgaggcgagg acgaaacgca gaccggcaaa agtgaatgga ggcagatcgc gcaagccgat
       61 cttgataaac agccaggtcg atccccagat gccgcaaagg atcagccaga cgatgcgggc
      121 tctcatttgc taagttgtac ttgaaacagt ttgcacgatc aaagtccgcg cagcggatgt
      181 ctgaaagtag cccagcgctt cagcgctggg atcaccgtcc agaaaagcaa ctgagcccgt
      241 gaaacgggcg acagaatctc agattcttct gccgtccgct tcgcggactc gaaatcaaaa
      301 accattggta cccagccctg aagcgctggg ctactttcag acatccgcta cgcggactct
      361 taacgccaca accagctcaa gaccttactt gttctggtta tgttgcatgt ccaacttgat
      421 aatgttgaac gcggcgccct ggggatcagc cagcacggcg aaacggccga cgtttggtat
      481 gtctgtcggt ggcatgtacg tgcggccgcc gagcgacgtg gctttttcga ccatcgcatc
      541 gcagtcatca actgcgaaat agactcccca gttgggcggc atcgggccca tgtcgggctg
      601 gatttgcatc attccgccaa tgtgctcttc accgtttatc cattcggtgt agggcatccc
      661 tttgtcgcca tcagtcttgg acttccagcc gaagagcttc gtgtaaaaat cctttgctct
      721 ctcgctgtcc ttggtcatca gctcgttcca gcacagactg ttgttttcat tcttgatgcc
      781 gacgcctttg tgctggttcg gttgccagat acagaaggtg gctccggttg gatcggtgat
      841 cgccgccatc cggccgtgat ccatcacatc gaacggctcc tgcacgacag tcccgccgag
      901 tgacttagcc ttggcggcag tttcgtcggc gctctcgacc gcgacgtaac aggcccagtg
      961 cgtggggacc tgttccatct cggggccttt ttgatatgac gcggcgacgt ctttaccgtt
     1021 gatcttgtaa atcgtgtaaa ccatgtcggg ccccattgga ttgtcctgga tttcccatcc
     1081 gaacaggtcg gtgtagaact tctttgctcc tgggccgtcg gtagtggcca gttcgatcca
     1141 agagaacgtt ccgggggcgt gttccatttg agtttgcgcg gctgcttccg tcattacggt
     1201 atctcctttg ttgttttaat gatggcggtt tgtgggccga gactgtatca gccagcccgc
     1261 aaattttcta gcagcaaacg gggaagtgcg tgtaaaaagt tgtgaagttt gaggggaagg
     1321 agagagcgcg ccggcgccgc gcgtacccta aaaacgaaat cgcgctgctt tcacccgaag
     1381 atgcatagca gcgcaatctc gaagtcttat gaatcaccga agcgattcgt aagatggcag
     1441 cctgtcctcg tcaggcgcaa gccgccattt gtataccggt aagcaatcgg cggtcgatgc
     1501 ttcccggtca gcacacgatt cgcttcagtt aacttcgcgt cccttgcgag ccgcaaaatc
     1561 tgtttccgca aatctcacat caaagccgac aagtcggtat caacgtggtg ccgttaggta
     1621 gtcttttttg gtggctgtcc tccaccgccg gttacgttcc ggcaacgagg ctcggatttc
     1681 tccgagcgac atagctcacc actagcgggt ccttcccagt ggttgctacc cgtttttatc
     1741 cgggcgctca ggaaaatctt tcgactctcc ctggcagacc tttcggtctc aacgaaaggc
     1801 gtcatagcaa ctgcaaaccg ctctgccttt gctctctctc agagtctcgc gactccgttc
     1861 gccgtcctct cgttggtctc gatagccgtg accgtcgtga cgatgtggtt tataccgaaa
     1921 acaaattttc tggtcaaagt tctgtgtgtt ttatttttcg aaaggggatt tattttgctt
     1981 gatgtgcgaa aaaacgctga gtgttttcag aagattcatc tcctgaaata aaacagttcg
     2041 ccgattacag aaaacgcagg atctgtttct tgtctatgtt ttgagctgta gcgaccgcgc
     2101 ggagaataga gttgagtgtc ccgactctca gtggatcatg atccggtgca gcaatacgat
     2161 gatgagggtc ttcgcgttga agaatgacgt gactccctac ctgatgtacg cgctcgtaac
     2221 caaattcacg gcacaagact gcgatgagtt cggtcccgct tagatcgcgc ggccagcctc
     2281 atgcgcaggc gagaacctca tcgcgaacca agtgcaagcg gattcgttcg ggttttggct
     2341 gatcgaaaaa gtaaccagtt accgcctcct gcacgtttga ccgtagttcg tcccaggaat
     2401 tgccttgagt aaagatgtcg tgagagaggc attctgcgac aaatccgccg tcagtttcct
     2461 gataaacgct gaagacaatt tccatggttt tattctgcat gaacttagaa aagcaagcaa
     2521 gatcgtcggc ttacgtgatt tgctggtgcc gaaaacagtt cacgtcgtga tcattgacca
     2581 ttccgaccgc ttgcatgaac gagtagcaga ttgtcgggcc gacgaatttg aagccgcggt
     2641 ttaagaggtc gcggctcaac gcctcggatg tggtggtggt aacgggaacc ggcgcgccgc
     2701 gcttgcgccg caaaggcttt ccgttcacga atcgccagac atacgcgtcg aaactgccga
     2761 actccttctg tacagcgaga aacgcttgcg cattctgaat cgccgccgcg atctttaagc
     2821 gattacgaat gatgccttcg tcggagagca gtttctcaac tttgcgctga tcgtatttcc
     2881 cgacttttcg cgcgtcaaaa ttgtcgaaag cgcgacggta attctcgcgc ttccgcaaaa
     2941 tcgtttccca gctcaggccg gcttgtgcgc cttcgagaat cagaaactcg aacagggtcc
     3001 gctcgtcatg caccgggacg ccccattcac gatcgtgata ctcgatagac agcggagtct
     3061 ttgcccactg acagcgggcg ggtgtgacag gagaattcaa agtttaacgg agccctccct
     3121 agcgaccacc ccacgcgggc tgcccgcgcg gggaccccgg ttagtcgggc tactgccgcg
     3181 aatgatgttt gccgttgatc acgcccttga tcactttcag caggtcacct ggttcgaccg
     3241 gtttcgcaag gtgtgcctgg aacccggcgg aaagcgacag cttgcgatcg ttttcggtag
     3301 cgaacgccgt caaagcaatc gccggaagtt cccttgtatc cgaagtcatc gcacgcactt
     3361 tgcgaatcaa atcgtaaccg ctctcgagcg gcagaccgat atcactgact aaaacatcag
     3421 gagcggacag cgacaaactt tcgaatgccc ccttcgccgt gtcgacggcc tcgacctggg
     3481 cgcctgagct ttgcaacacc atcgcgatta gctcgcgcgc atcaggttcg tcttccacca
     3541 agagaatgcg caagcccttc agctcgtgac cgtggtcacc gttcgtcgtt tgtgattccg
     3601 cacgcgacgc gagccctttt tcgatcgcgg ccaacggcaa gtgaatcgtg aaggttgatc
     3661 cgcggttctc gccgtcgctg gccgcggtca ccgtgccgcc atgcagctca ataaggtgac
     3721 gcacgatcgc gaggcccaat cccattccgc gatgagatcg cgtcgcggtt gattcggcct
     3781 ggcgaaagcg ttcgaacaca tgcggtagaa agtcgggcga aatgccaatg ccggtgtcgc
     3841 ttatgacaac ttcggcaaat ccattttgac gccggaagtc gatggacacc ttgccgcctt
     3901 tcggagtgaa cttcacggcg ttcgacagaa ggttccaaat aatctgttgc aggcgcgagg
     3961 cgtcgcctgc cacgggtccg accctggcgt cgtagttaac gtcgatcgtg atctctttag
     4021 cgtcggcggc cggccgcaca acttcaatcg aggcgtcaac gatgggcatc aattccgtcg
     4081 gcacaacttc cagattcagt ttgccgccga cgatgcgcga gatatctacg agatcttcg
//
LOCUS       DATDBY010000527         2352 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1242939, whole genome shotgun sequence.
ACCESSION   DATDBY010000527 DATDBY010000000
VERSION     DATDBY010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1242939"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1318
                     /locus_tag="VIT19_09830"
     CDS             <1..1318
                     /locus_tag="VIT19_09830"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HEY5839323.1"
                     /translation="LVEYKEKYPEVQEVDQQIAVLEKQIKDSRNRATTTVTTNLETRY
                     RQAAGREQSLRAAFDRQRGEMLSQNEAAVNYRIIQQEIETNKGLLDGLLQRAKENDVM
                     MAGTPNNIHVVDYAPVPKSPVGPKRAQSMALAALVALILGIALARYLDYLDDTIHSSD
                     DVEKSLRLPALAVIPAIRASTRLRLASSMTGLQLQKNGNVLSNSARPELLLNADSTSP
                     LAEAFRHLRTSILLSNAGGAPQTLLVTSSQPSEGKTTTAINTALILKQTGAKVLVIDA
                     DMRRPRLHSVFDMENKRGLSTILASKMNEEQTLEVIEHHEESGVDVLTSGRVPPNPAE
                     LIGSDSMQRLMALLKTRYTHIVFDSPPIASFTDSVLISSLVDGVLLVVQGDRVSRTIV
                     RRSRQVLSEVGARIFGVVLNNVSLRPSDYYYYKYYGQKYYKAEEAA"
     gene            1396..>2352
                     /locus_tag="VIT19_09835"
     CDS             1396..>2352
                     /locus_tag="VIT19_09835"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5839324.1"
                     /translation="MKILYLSACSQLGGAERVLLDILASIRAANSEVSLHVVTTEDGP
                     LISECDALGVQATVVPLPKRAARLGDATSEQSLLNLFAAAPSIIAHLLRLRRVIRSFA
                     PDVIHTNGFKVHVMGAFAKPRGSALVWHIHDFVSSRPVMAKLLRHLSRCCDLAVANSR
                     AVAADVRAVCTGISVKTIHNAVDLHRFSSTGAAIDVDELAGMRPSVPDTIRVGLIATL
                     ARWKGHETFLRAISLLPRHLPVHGYIIGDAIYQTDGSQHSLGELRALAEKLGVADRVG
                     FTGFIDDTASAMRALDIIVHASIEREPFGLVIAEAAACGNSII"
BASE COUNT          485 a          696 c          683 g          488 t
ORIGIN      
        1 gctggttgag tacaaagaga agtatcccga agtgcaggaa gtcgatcagc aaattgcggt
       61 gctggaaaag caaatcaagg attcgcggaa tcgcgcgaca accaccgtca cgaccaatct
      121 ggaaacgcgt tatcgccagg ctgccggtcg cgaacagtcg ctgcgcgcgg ctttcgatcg
      181 tcagcgcggc gaaatgctga gtcagaacga ggcggcggtg aactaccgca tcattcagca
      241 ggaaatcgaa acgaacaaag gactgctgga cggcctgctg caacgcgcga aagagaacga
      301 cgtgatgatg gccggcacgc cgaacaacat tcacgtcgtc gattacgcgc cggtgccgaa
      361 gagtccggtc ggtccaaagc gggcgcagag catggcgctc gcagcgttgg tcgcgctcat
      421 ccttgggatc gcattggccc gctatctcga ttatctcgac gacacgattc attcctcgga
      481 tgacgtcgaa aagtctctgc gactgcccgc gcttgctgtg attcccgcga tcagagcttc
      541 cacgcggctg cgactggctt cgtccatgac cggtctgcaa ttacaaaaga acggcaacgt
      601 cctcagcaac agcgcgagac ctgagctgct cctgaatgct gactcgactt cgccgctggc
      661 tgaggctttc cgtcacctgc gcacttcgat tcttctttcg aacgcgggtg gcgcgccgca
      721 gactctactg gttacgtcca gccaaccttc cgagggcaag acgaccacgg ccatcaacac
      781 cgcgctaatc cttaaacaaa ccggcgctaa ggttttggta atcgacgctg acatgcgcag
      841 gccgcgcctg cactcggtgt tcgatatgga gaacaaacgt gggctgagca cgattctcgc
      901 cagcaagatg aacgaagaac agacgctgga agtgatcgag catcacgaag aaagcggcgt
      961 tgacgtgctg acgtcgggca gagttccgcc aaatcccgct gaactgattg gctcagactc
     1021 aatgcagcga ctaatggcgc tcctgaagac gcggtacacg cacatcgtgt tcgactcccc
     1081 gccgattgcg tcgttcactg acagcgtttt gatttcgtcg ctcgtcgatg gtgtgttgct
     1141 ggtcgtgcaa ggcgatcgcg tttcgcgcac catcgtgcgc cggtcgcggc aggtcctgtc
     1201 ggaggtcggc gcgagaattt tcggcgtcgt gctcaacaac gtaagtctgc gcccgagcga
     1261 ttactactac tacaaatatt acggtcagaa gtactacaaa gccgaagaag ccgcgtgatt
     1321 ttggagtggt acgcacgcct ccgggcgtgc ctgccgccaa gttttctcgt ggacgcccgg
     1381 aggcgtacgt accatatgaa gatcctttat ctcagtgcat gcagccaact cggtggagct
     1441 gagcgagtct tgctcgacat actcgcctcg attcgcgccg cgaactccga agtttcgctg
     1501 cacgtggtta cgactgagga cggtccgctg atttcggaat gtgacgccct cggtgttcaa
     1561 gcgacggtcg tgcccttgcc gaaacgcgca gcgcgtttgg gtgacgcgac gtccgaacag
     1621 agcctgctga atctgttcgc ggctgctcct tcaatcattg ctcacctcct ccgcctgcga
     1681 cgggtgattc gctcgttcgc gcctgatgtc attcatacaa acggtttcaa ggtgcacgtg
     1741 atgggcgcct tcgcaaagcc gcgcgggtcc gcgctcgtct ggcacattca tgattttgtt
     1801 tcgtcgcgac ctgtgatggc caaacttctg cggcatcttt cgcggtgctg tgacctggca
     1861 gtggcgaatt cccgcgcagt cgcggcggac gtacgcgccg tttgcacagg cattagcgtt
     1921 aagacgattc ataacgctgt tgatttgcat cgattttcgt cgaccggcgc agccatcgat
     1981 gtcgacgagt tggccggcat gcgaccgtca gtccccgaca caatccgcgt ggggttaatc
     2041 gcaacgttag cgcgatggaa aggtcacgag acgtttctgc gggccatttc tctgcttccg
     2101 cgccaccttc ccgtgcacgg ctacatcatc ggggacgcaa tctaccaaac agacggcagt
     2161 caacattcac tcggcgagct gcgcgctctg gcggagaaac tcggggtcgc ggatcgcgtc
     2221 gggtttaccg gtttcatcga cgacaccgcg tcagcgatgc gggcgctcga catcatcgtg
     2281 cacgccagca tcgaacgcga accattcgga ctggtcattg ccgaagccgc cgcgtgcggc
     2341 aactcaatca tc
//
LOCUS       DATDBY010000528         3456 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1680419, whole genome shotgun sequence.
ACCESSION   DATDBY010000528 DATDBY010000000
VERSION     DATDBY010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3456
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1680419"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2463)
                     /locus_tag="VIT19_09840"
     CDS             complement(<1..2463)
                     /locus_tag="VIT19_09840"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY5839325.1"
                     /translation="MKGSVLTGRTLFLLGATALLVAAGVLNFSQRGSHQAPPTDGVSW
                     VDTSEGVVAKAVEPGSAAARARIIPGDRLIAISPNGEPCEPGIEGPRCEPAGNSTRVQ
                     IYLDRARVGGEIHYLIERPSFPAETRFYYADLDNLGSIQTLTPRDLYINLIGVVYLCI
                     GLFVIFKQGARAPFVLHFATLCLTAFVFHFFTSTGSYRDLDLAIAILDNTAFILFAPL
                     FLHFAAIYPVRHRLFDEKHWRAVYLYLPSLLLAAVGTIIFLRDQIVLIAPPLSGVLDY
                     SQTFVARFYRISFIHFVAALVISAAILIRRFVVSKNTVARQQLKWVVWGSALAIAPFT
                     LFYAIVYVLGADTAGPLTDVAFLPLILIPLSFGYSVVRYRLMDVELVVRRAVVYAATT
                     LGIALAVGAVVYIAGLYALAGGVASSGEVTFRLVLSIVLMAAIVMIAAPVKNFLQERV
                     DRLFYGRRYDMRHSLLDFGRTISASTALDPLLDSLISRLREVMNVERVAIFIEDQTDS
                     SGYRVARTAGLSEVSAPPDFREMIRARSAETGVVRADDLELPAESGNFVRRTLHYYLP
                     CVVRGRMVAVIGLGRSSDGALLSSEDVEILRTVSGYIAVAIENSLLYQEQKHRAAELE
                     LLKEFNESIVESINVGLLAVDLNGNITRLNSAMEEIFSMSREEANGKNVEDLFAEDFA
                     DTLRQVLGPEGWHLSQTRQIYKLHTITRAGRSAVLNIALAPLYADTEEQTGALVVLED
                     VTQRLQLEEQLQQREKLSSIGLLAAGVAHEVNTPLTGVSSYTQMLLGMLPESDPKHAL
                     LEKVRRQAERATDIVNNLLNFSR"
     gene            complement(2758..>3456)
                     /locus_tag="VIT19_09845"
     CDS             complement(2758..>3456)
                     /locus_tag="VIT19_09845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839326.1"
                     /translation="NAVFKQPTAQPVAYVGGRAVMARSRRFEIGLERELSNRSNVEAT
                     AFVDMTSSRGVGLLAMPASAFSGVNAAAMMRVANQEGSARGVRVVYSNRLNHVWNASA
                     GYSFGRGQRLSSAGIRNPSQLFDGAFFNTVALQIAGDWSTGTHVQTVFRFSPEATVFA
                     IDPFAGQLAVYDPSLSIQVTQDLPTFGLPLRAQAILDARNLFDVQTTTSNGETLLLLA
                     PSGRSVRGGISLRF"
BASE COUNT          823 a         1024 c          969 g          640 t
ORIGIN      
        1 gcgtgagaag ttcagcaagt tgttgacgat gtcggtggcg cgctctgctt gccggcgaac
       61 tttctccaga agtgcgtgct tcggatcgct ttccggcagc atgccgagca gcatttgcgt
      121 gtaagaagac acgccggtca aaggcgtatt tacctcgtgg gccacaccgg ccgccaacaa
      181 accgatcgaa gaaagtttct cgcgttgctg cagttgttct tccagttgca ggcgctgagt
      241 tacatcttcg agaactacca gcgcgcctgt ctgctcctcg gtatcggcgt acagcggcgc
      301 caaagcgatg ttaagcaccg ccgaccggcc ggcgcgggta atcgtgtgca gcttgtaaat
      361 ctggcgcgtc tggctgaggt gccaaccttc cggtcccaac acctgtcgca gagtgtcggc
      421 gaaatcttcg gcaaagagat cctcgacgtt cttgccattc gcttcttcgc gcgacatcga
      481 gaagatttct tccatcgcgg aatttaaacg cgtgatgttg ccgttcaaat caaccgccaa
      541 caagccgacg ttgatcgatt cgacgatcga ttcgttgaac tctttcagca gctcgagttc
      601 ggccgcgcgg tgtttctgtt cctggtaaag caggctgttc tcgatcgcga ccgcgatgta
      661 gcccgagacg gtgcgcaaaa tttccacgtc ttctgacgaa agcagcgcgc catcactgga
      721 ccgtcctaat ccaatcaccg cgaccatccg gccacgcaca acgcacggca ggtaataatg
      781 cagcgtgcgc cgtacaaagt tgccgctttc cgccggcagc tcaaggtcgt ctgcgcgcac
      841 cacgcccgtc tcagccgagc gggcgcgaat catctcgcga aaatcaggtg gcgcgcttac
      901 ttccgagagt ccggctgtac gggcgactcg atagccggat gaatcggtct ggtcttcgat
      961 aaaaatcgcc acgcgctcaa cgttcatcac ttcgcgcaag cgcgaaatta acgagtcgag
     1021 caaaggatcg agcgccgtgc tcgcggaaat cgtgcgtcca aagtcgagca ggctgtgacg
     1081 catgtcgtaa cggcggccgt agaacagccg gtcaacacgc tcctgaagaa agttcttcac
     1141 cggcgcggca atcatgacga tcgcggccat cagcacaatg gacagcacca accggaacgt
     1201 gacttctcct gacgacgcga ccccgccggc taatgcatac aggccggcga tgtaaacgac
     1261 tgcgccgacg gcgagcgcaa ttcccagcgt cgtcgcggcg taaacaacag cgcgacgcac
     1321 gaccagctcg acatccatca aacgatagcg aacgaccgaa tagccgaatg acaatggaat
     1381 caaaatcagc gggagaaaag cgacgtccgt taacggtccc gccgtgtcgg cgccgagcac
     1441 gtaaacgatt gcgtaaaaca gagtgaaggg cgcaatcgcc agcgctgatc cccaaacgac
     1501 ccacttcaac tgttggcgcg ccactgtgtt cttgctgacg acgaaacggc gaatcaggat
     1561 ggctgcgctg atcactaacg cggcgacaaa atggatgaaa gagattcgat agaagcgcgc
     1621 gacgaacgtc tgcgaataat ccaacacccc gctcaacggc ggagcgatca ggacaatttg
     1681 atcgcgcaga aagataatgg tgccgaccgc cgccaaaagc agcgacggca gatacaggta
     1741 cacggctcgc caatgcttct cgtcgaacaa acgatgacgc accgggtaaa tggcggcgaa
     1801 gtgcaggaac aagggcgcga acaggatgaa ggccgtgttg tccagaatcg caatcgccaa
     1861 atccagatcg cgataacttc cggtcgaggt gaagaaatga aatacgaacg ccgtgagaca
     1921 aagcgtagcg aaatgcaaca cgaacggcgc gcgcgcgccc tgtttgaaaa tcacaaacag
     1981 cccgatgcag agatagacga ctccgatcag gtttatgtag agatcccgcg gcgttaatgt
     2041 ctgaatggat ccgagattgt ccaggtctgc gtaatagaaa cgggtctcag cgggaaacga
     2101 tggtcgctca atcaggtagt gaatctctcc gcccacgcgc gcccggtcga ggtatatctg
     2161 cactcgagtc gagttcccgg ccggctcgca tcttggccct tctatgcccg gctcgcatgg
     2221 ttccccgttg gggctgatcg cgatcagccg atcgcccgga atgattcgag cccgcgcggc
     2281 cgccgaacct ggttcgacag ccttggcaac gacaccttca gacgtgtcca cccaactgac
     2341 gccgtcagtg ggcggcgcct gatggctgcc ccgctgtgaa aaattcagca cgccggcggc
     2401 cacgagcaaa gccgtggcgc ccaacagaaa caacgttcgt cctgtaagta ctgaaccttt
     2461 catcgaacta ttcgaaacgt gcgcttgcga ctaatgtatg cgacacacga aatcgtttat
     2521 ttcaaagcaa ccgatgttcc agcttgcctt tcgcctcgcc ggaacgaaca gccctgacac
     2581 acttcaagct gacactcgct tttggctggg ttccctaacc gcgaagcgct gggcctcaga
     2641 cctgccatac tcccgccgta cgatttttcg tatgcctccg agattttgga gaaaccgcgc
     2701 gcctctggga acaggggtcg gactaagaaa ggataaggag gcgcgtcgct ctcgggtcta
     2761 gaagcggagc gaaattcctc cgcgaactga ccgcccgctc ggcgcgagca gcaacagtgt
     2821 ttcgccgttg ctcgtcgtgg tctgcacgtc aaagagattg cgcgcatcga ggatcgcctg
     2881 cgcccgcaaa ggcagaccaa aagtaggaag gtcctgcgtg acctgaatac ttaacgaggg
     2941 atcgtaaacc gccagctggc cggcgaaggg atcaatcgcg aataccgtcg cctcaggcga
     3001 gaaccggaag accgtctgca cgtgagtgcc cgtagaccaa tcaccggcaa tttgcagtgc
     3061 gaccgtgttg aaaaacgcgc cgtcaaaaag ttgagatgga ttgcgaatgc cggcagatga
     3121 aagacgctgg ccacgcccga acgaataacc ggcggacgca ttccagacgt ggttcaaacg
     3181 gttcgagtaa acgacgcgca cgccgcgagc tgatccttcc tgatttgcca cccgcatcat
     3241 ggcggctgcg ttgactcctg aaaaagcgct cgcgggcatg gccaacaaac caacgccgcg
     3301 acttgaagtc atatccacaa acgcagtcgc ttcaacgttc gagcgattgc tgagttcgcg
     3361 ttccaaaccg atttcaaagc gacggctgcg cgccatcacg gcgcggcccc caacgtaagc
     3421 caccggttgc gccgtgggtt gtttgaaaac tgcatt
//
LOCUS       DATDBY010000529         5309 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_257483, whole genome shotgun sequence.
ACCESSION   DATDBY010000529 DATDBY010000000
VERSION     DATDBY010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5309
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257483"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..300
                     /locus_tag="VIT19_09850"
     CDS             <1..300
                     /locus_tag="VIT19_09850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839327.1"
                     /translation="EAPYAPLASLVKERVRKMILIGEDAPTIESELGSIAPFDYAVSM
                     GDAVQRGFNAAQPGDTVLLAPACASFDMFKSFEHRGRVFKESVQSLKSKVQSPAG"
     gene            345..1547
                     /gene="ftsW"
                     /locus_tag="VIT19_09855"
     CDS             345..1547
                     /gene="ftsW"
                     /locus_tag="VIT19_09855"
                     /inference="COORDINATES: protein motif:HMM:TIGR02614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HEY5839328.1"
                     /translation="MTEKLQIDKWLFSATAGLALFGVVMVYSASAVIAVQENHSQFHY
                     VMKQGIWTLIGFGAMFVMMRFDYQFLNRPWIVYGLLLVTLVLLVAVFAFPAVNGARRW
                     IKGSGFSMQPSELAKLSLAIFVAYFIQRRAGEEQSFWKTFLPCLFVLGIVAALVLKQP
                     DLGTALMLAIIVFTMCYAGGVRVRHMLFAMVPALLFVGNMLIFTPFRMKRLAAFMDPW
                     ADAQGTGYQVVQSLIAVGSGGQNGLGFAQGRQKLLFLPFAHSDFIFAVIGEELGLIGA
                     LIVVIVFAVFLWRGMRAALRAPDRFGMLLGIGIVVGIVAQALLNISVVLALLPTKGIP
                     LPFISYGGSSLVPTLAAVGILLNISQFAGRGSGTAYDDGDYEEDWQPARSTRKKRPVR
                     QRAVARAR"
     gene            1556..2647
                     /gene="murG"
                     /locus_tag="VIT19_09860"
     CDS             1556..2647
                     /gene="murG"
                     /locus_tag="VIT19_09860"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: protein motif:HMM:TIGR01133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEY5839329.1"
                     /translation="MRVLIAAGGTGGHIYPGIAVAKEIMRRDPNSVVRFVGTARGLET
                     RVVPNAGFELSLIESTGLKNVGLAARLRGIVLLPKSFLAARKVIREFRPDIVVGAGGY
                     VSGPVLLTAAFMKRPTLVMDSNALPGFTNRRLARFVDKAAVSFAEAMSFFPGKAVLTG
                     NPVRSEFFEVPAKTGDPQHVSLLVFGGSQGARAINEAMIAALAHLVSEKDRLRVTHQT
                     GTGDVERVQRGYAEAGWSGKAEVKAYIDNMVAEFAKADLIVSRAGATTTAELLAAGKV
                     AIMIPFPLAADDHQRKNAEALQAAGAARMILQKDLSGETLATEIRSLLSTPEKLNEME
                     NAARKLARRDAAEKTVDLMEDLVRARRKN"
     gene            2829..4211
                     /gene="murC"
                     /locus_tag="VIT19_09865"
     CDS             2829..4211
                     /gene="murC"
                     /locus_tag="VIT19_09865"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR01082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEY5839330.1"
                     /translation="MFRPFQHIHFVGIGGIGMSGIAEVLANLGFRVSGSDQKKSEVTA
                     RLEELGCEITEGHAAGNVGDAHVVVRSTAVRDDNPEIVEAQQRSIPVIPRAEMLAELM
                     RMKPYTVACAGSHGKTTTTSMVATVLGIAGLDPTFVVGGIVRSYRSNARLGKSELMVV
                     EADESDRSFLMLTPMIAVVTNIDREHMDYYHDMEDVRKCFADFVNKVPFYGAAVLCLD
                     DPHVQAVIPNVARRRITYGLSAQADISAHDITYDQSFGSSFTVLSGVNALGRVSLRVP
                     GKHNVYNSLAAIAVALELDVPFDTIAHALGEFTGADRRFQFKGEEKGITVVDDYGHHP
                     TEIKATLSAARIAAPNRRIVVLFQPHRYTRTADLLDEFASAFNNADVLFVTDIYAASE
                     VPIDGVTAEILTKRIKSYGHKNAEFIGAVEDAPAIMAEAVREGDLVITLGAGSVSRAS
                     DQLVALLRGD"
     gene            4308..5285
                     /gene="murB"
                     /locus_tag="VIT19_09870"
     CDS             4308..5285
                     /gene="murB"
                     /locus_tag="VIT19_09870"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: protein motif:HMM:NF010480.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEY5839331.1"
                     /translation="MRIDSDSTIEQIAARIGVNAERGRRFAELTSLRVGGAIDWVISP
                     KTEEQAATLVGELEKSDIAWRPLGSGSNVLADDGEHHYVIVSLKDLKAEPKFDGDRVS
                     VSAGYSLPRLCVDAARHDLSGIEGLNGIPGTVGGALWMNAGAYDQEIGTVVETVRVAR
                     DGRVTEIPGSEVQWNYRHTSFRDGELLLGATLRLHRDDPEKIRERMEKAKGQRMATQP
                     HGTRSAGCFFKNAPSSPIGTGKMIDDLGMKGTRRGGALVSEKHANFIVTDGEEAKASD
                     ALALAEEIRERVKREHGIDLEFEVELWSSVSEPGAVATGSEETSKGKNP"
BASE COUNT         1122 a         1324 c         1695 g         1168 t
ORIGIN      
        1 gaagcgccgt acgctccgtt ggcatcgctc gtcaaagaac gcgtgcgcaa gatgattctg
       61 attggcgaag acgcgcccac gattgagagc gaattgggaa gcatcgcccc ttttgattat
      121 gcggtgtcga tgggagatgc agttcagcgc ggatttaacg cagcacagcc gggcgacacg
      181 gttctgctcg cgccggcgtg tgcgagtttc gatatgttca agagtttcga acaccgggga
      241 cgcgtcttta aagaatcagt ccaaagtcta aagtccaaag tccaaagccc ggctgggtaa
      301 cggacattgg acattggacg tcggacttgg gactaactta aagaatgacc gagaagcttc
      361 aaatcgataa atggctcttc tccgcgacgg cggggctggc gctgtttggc gtggtcatgg
      421 tgtacagcgc gtcggccgtg attgcggtgc aggagaatca cagccagttt cattacgtga
      481 tgaagcaggg catctggacg ctgatcggat tcggcgcgat gttcgtcatg atgcgattcg
      541 attatcagtt tttgaatcgc ccgtggattg tttacggctt gctgctcgtc acgctcgtgt
      601 tgctggttgc ggttttcgct tttccggccg tcaatggggc tcgtcggtgg atcaagggaa
      661 gcggcttttc gatgcagcca tccgaactcg caaaactgtc tttggcgatc ttcgttgcgt
      721 atttcattca gcggcgtgcg ggcgaagaac agtccttctg gaagacgttt ctgccgtgtt
      781 tgttcgtgct cgggatcgtc gccgcactcg tgctcaagca acccgatctc ggcacggcgc
      841 tgatgcttgc gattatcgta ttcacgatgt gctatgcggg aggtgtgcgc gtgcggcaca
      901 tgctgttcgc gatggtgccg gcactgctat tcgtcggaaa catgttgatc tttacgccgt
      961 tccgcatgaa gcggttggcg gcatttatgg atccgtgggc cgacgcgcag ggcacgggtt
     1021 atcaggtggt gcagtcgctg attgccgtcg gctcgggcgg tcaaaatgga ctcgggttcg
     1081 cgcagggccg gcagaaactt ctgttcctgc cgttcgcgca ctccgatttt attttcgcag
     1141 ttatcggaga agagttggga ctgatcgggg ccttgatcgt cgtcattgtt tttgccgttt
     1201 tcctttggcg tggaatgcga gcagctttgc gcgcgccgga tcgattcgga atgttgctcg
     1261 gcatcggcat cgtggttggc attgtcgccc aggcgttgct gaacataagt gtcgtgctcg
     1321 cacttttgcc gaccaaaggc attccgctgc cgttcatttc ttatggagga tcttctttgg
     1381 tgccgacgct ggccgccgtg ggaatcctgc tgaacatttc gcagtttgcc gggcgcggca
     1441 gtggaaccgc atacgacgac ggggattacg aagaagactg gcagccggcg cgctcaaccc
     1501 gaaagaaacg gccggttcgc cagcgcgcgg tggcgcgcgc gcgttagggt gaacgatgcg
     1561 tgtgctaatc gcggccggcg gcaccggcgg gcacatttat cccggcatcg ccgtcgccaa
     1621 agagatcatg cgacgcgacc cgaattcggt ggtgagattt gtcggcacgg cgagaggctt
     1681 agagacccgg gtagtgccga atgcaggttt tgaactttcg ctcattgaaa gcacgggact
     1741 gaaaaacgtt gggttggcgg ccaggcttcg cggcatagtg cttttgccga aaagtttttt
     1801 ggcggcacgg aaagtgattc gcgagtttcg tcccgacatt gtggtaggcg cgggcggtta
     1861 cgtctcgggg ccggtgctgt tgacggccgc tttcatgaag cggccgacgc tcgtaatgga
     1921 ctcgaacgcg ctgccgggtt ttacaaatcg acggctcgct cggttcgttg acaaagcggc
     1981 agtttccttc gctgaagcga tgtcgttctt tcccggcaaa gcggtcttga ccggtaatcc
     2041 ggtgcgcagc gagttctttg aagttccggc gaagaccgga gacccgcagc acgtttcgct
     2101 gctagtgttc ggcggttcgc aaggcgcgcg cgcgatcaac gaagcgatga ttgcggcgct
     2161 ggcgcatctt gtatccgaga aagatcgttt gcgcgtgacg catcaaacgg gtacgggcga
     2221 tgttgagaga gtgcagcgcg gttacgctga agcgggttgg agcgggaagg ctgaggtgaa
     2281 ggcgtacatc gataatatgg tggccgagtt tgctaaggct gatttgatcg tttcgcgcgc
     2341 gggcgcaacg acgaccgcgg aactgctcgc ggccggcaag gtggcaatca tgattccgtt
     2401 tccacttgcg gctgacgatc atcagcgaaa gaacgccgag gcgctgcaag cggccggcgc
     2461 ggcccggatg attttgcaaa aggatttgtc gggagagact ttagcaactg aaatcagaag
     2521 tctgttgtcg acgcccgaaa agctcaatga gatggaaaac gccgcacgaa agctggcgag
     2581 acgcgatgcg gcggagaaga cggttgattt aatggaggat ctggtaaggg cgcgacggaa
     2641 gaactgatta tttggcattt gagatttgtc atttgtcatt gaacccaaat gcattcactt
     2701 ggtttggtga tgttcggact actgacaaag acggcgaaca tcgtgaattg aaattacaaa
     2761 tgacaaattt caaatgccaa atgtcagatg atctggttcc gtaacaaacg atagaagtct
     2821 agaaattaat gttcagacct ttccaacaca ttcattttgt cggtatcggc ggcattggca
     2881 tgtcgggcat tgccgaagtg ttggcgaacc ttggtttccg cgtgagtggt tccgatcaga
     2941 agaagtcgga agtgactgcg cgcctggaag agttgggctg cgaaataacg gaaggtcacg
     3001 cggcggggaa tgttggcgac gcgcatgtgg tggtgcgttc aaccgcggtg cgtgacgaca
     3061 atccggagat tgtcgaggcg cagcagcggt cgattccggt gattccgcgt gcggaaatgc
     3121 tcgcggagtt gatgcgcatg aagccttaca ccgttgcgtg tgccggctcg cacgggaaga
     3181 ccacgacgac ttcaatggtc gcgaccgtac tcggcattgc cggattggat ccgacatttg
     3241 tcgtgggcgg cattgtccgc tcgtatcgct cgaacgcgcg actgggcaag agcgaattga
     3301 tggtggtcga ggctgacgag agtgatcgat ccttcctgat gctgacgccc atgattgcgg
     3361 tggtgacgaa catcgaccgc gagcacatgg actactacca cgacatggaa gacgtgcgga
     3421 agtgcttcgc tgattttgtg aacaaggtgc cgttctacgg cgcggcggtg ctgtgtctcg
     3481 acgatccgca cgtgcaagcc gtaattccaa acgtcgcgcg ccggcgcata acttacggcc
     3541 tgagcgcgca agcagacatt tccgcgcacg acatcactta cgaccaatca tttggttcaa
     3601 gtttcacggt cttgagcggc gttaacgcgc tcggtcgcgt ttcgctgcgc gtcccgggga
     3661 aacataacgt ctataactcg ctcgcggcga ttgcggtcgc gctggaactg gatgtgcctt
     3721 tcgacacgat cgcgcatgcc ctaggcgaat tcactggcgc tgatcgccgg tttcaattca
     3781 agggcgaaga aaagggcatc acggttgtcg atgactacgg ccaccacccg accgaaatca
     3841 aagcgaccct cagtgcggcc cgaattgcgg cgccgaaccg gcgcatagtg gtgctgtttc
     3901 agccgcaccg ctacacgcgc acggccgatt tgttggatga gttcgccagc gccttcaata
     3961 acgctgatgt cttgttcgtc actgatattt acgcagccag cgaagttccg attgatggcg
     4021 tcactgccga aatcttgacg aaaagaatca agagttacgg gcataagaac gccgaattta
     4081 ttggcgcggt ggaagatgcg cccgcgatca tggccgaagc tgttcgcgaa ggcgatttgg
     4141 taattacatt gggcgcgggc tcagtttctc gcgcaagcga tcagttggtt gcgttgctgc
     4201 gcggtgatta gtcccatcag tcacatcggg tcccattcgt cgcatgggac acatgggaca
     4261 catgggacat atgggaccaa tggggaccaa gggacacatg gggcgaaatg agaatcgaca
     4321 gcgatagcac catcgaacag atcgcagcgc gaattggcgt gaacgcggaa cgcggacgac
     4381 gctttgccga actcaccagt ctgcgcgtcg gtggcgcaat cgattgggtc atttcgccga
     4441 agaccgaaga gcaagcggcg actctcgtcg gtgagcttga gaaaagtgat atcgcatgga
     4501 ggccgctcgg ctccggaagt aacgtgctcg ccgacgacgg tgaacaccac tacgtgattg
     4561 tgagcttgaa agatttgaag gctgaaccga agttcgatgg cgaccgcgtt tccgtgagcg
     4621 cgggctactc gttgccccga ctgtgcgttg atgcagcgcg gcacgatttg tcgggaatcg
     4681 aaggtctgaa tggaattccg ggaactgtcg gaggcgcgct ctggatgaac gccggagcgt
     4741 acgaccagga aatcggaacg gttgttgaga cggtgcgcgt ggcccgcgac gggcgtgtga
     4801 cagagattcc gggaagtgaa gtgcagtgga attaccggca cacgtctttt cgcgatggtg
     4861 agcttctgtt gggcgcgacg ttgcgactgc accgcgatga tcccgaaaag attcgcgagc
     4921 gaatggaaaa ggcgaagggc cagcgcatgg cgacccagcc gcatggcacg cgctcagccg
     4981 gatgtttctt caagaatgct ccgtccagcc cgatcgggac cggcaaaatg attgacgacc
     5041 tcggcatgaa agggacccgg cgcggcggcg cactggtttc agagaagcac gccaatttca
     5101 tcgtcacgga tggtgaagaa gccaaagctt cggacgcgtt ggctctagca gaagagattc
     5161 gcgagcgcgt caaacgagaa catggaattg atctcgaatt cgaagttgag ctgtggagtt
     5221 ccgtgtcaga acccggagcg gtagcgacgg gatcggaaga aacttctaaa ggcaagaatc
     5281 catgaaagaa caagtcatcg catcacgcg
//
LOCUS       DATDBY010000530         2289 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1637872, whole genome shotgun sequence.
ACCESSION   DATDBY010000530 DATDBY010000000
VERSION     DATDBY010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1637872"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VIT19_09875"
     CDS             <1..382
                     /locus_tag="VIT19_09875"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEY5839332.1"
                     /translation="LKLGLITDRNTEQYRVWFMHGTSHWLGMNVHDVGGGATFEPGMV
                     FTNEPGIYIRPDALDNLPKTAEMEKFIAAVRPAFEKYKGIGVRIEDDMLVTDTGVKWM
                     SAALARSIPDIEAFMARARREGSR"
     gene            457..1275
                     /locus_tag="VIT19_09880"
     CDS             457..1275
                     /locus_tag="VIT19_09880"
                     /inference="COORDINATES: protein motif:HMM:TIGR01533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase, lipoprotein e(P4) family"
                     /protein_id="HEY5839333.1"
                     /translation="MKYTFGQLVRQIAVVGALSLTMVSAASAQKVDNEHQVGGILWTQ
                     TSGEWRALAYQAFAIARLRLDQDLRANRNRRIRRAVIVDVDETVLDNSPYQGMTVKTR
                     TAYESKSWLSWCEKAEAAAIPGAVEFLRYANSRGVRVFYVTNRRESEKQCTAQNLKKV
                     GFPDVSDETVLVRTGVSSKQPRRDGIARKHRVVLLMGDNLNDFAEIFEQSKTIDSRLA
                     ATTQNKSNFGSRFIVLPNVMYGAWEEAMYGDPSKLTEEQKAEKRRNTLKDFKGN"
     gene            complement(1272..1829)
                     /locus_tag="VIT19_09885"
     CDS             complement(1272..1829)
                     /locus_tag="VIT19_09885"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEY5839334.1"
                     /translation="MSANLKNHFTVSEYERMGENGIFPPDARVELIEGEIIEMSPIAS
                     RHAACVKLLNLILIQQVGVDAIVSTQDPIRLSDLSEPQPDVALLKFRQDYYRDGHPRP
                     DDVLLVIEVSDTTVQYDRHTKMPLYARAGISEALLFNLPDDRLEYFSRPEMGEYQVNQ
                     ILNRGERFESTNVAGLTLDIAMILG"
     gene            complement(1909..>2289)
                     /locus_tag="VIT19_09890"
     CDS             complement(1909..>2289)
                     /locus_tag="VIT19_09890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839335.1"
                     /translation="ELFLLAIPIACVAWTVTHEEVFREPREFCKRRSEGCRRWYQRKF
                     FYLFTCEYCFSHYIAAAFLIITRFKLLFPDWRGYLIAFFSLVWIANQYMSVYNRLRLD
                     IKTEKLESEIKEEVAEAAKKKNNR"
BASE COUNT          550 a          599 c          642 g          498 t
ORIGIN      
        1 gctgaagctc ggcctgatta ctgatcgcaa cactgagcag tatcgagtct ggtttatgca
       61 cggcacttcg cactggctgg gcatgaacgt tcacgatgtc ggcggtggcg cgacgtttga
      121 acccggcatg gtgttcacga atgagcccgg tatttacatt cgcccggatg cgctcgacaa
      181 tttgccgaag acggctgaga tggaaaaatt catcgcagcc gtgcgcccgg cgttcgaaaa
      241 atacaaaggc attggggtgc gcatcgaaga cgacatgctg gtcaccgaca ccggcgtgaa
      301 gtggatgtcg gctgccctgg cgcgcagcat tcccgatatc gaagcgttca tggcgcgcgc
      361 gcgtcgtgaa ggcagtcggt aacgcttcag cacaatcaat cttttcaagg cgggctccag
      421 cccgcctttt tgcgagcaaa catcggagga caactgatga aatacacgtt tgggcaactg
      481 gtccggcaga ttgcggtcgt cggcgcgctt tcactgacca tggtctcagc cgcctccgcg
      541 caaaaggtcg ataacgaaca tcaggtcggt gggatccttt ggacgcagac gtcaggcgag
      601 tggcgcgcgt tggcatatca ggcgttcgca attgcgcgac tgcgactaga tcaggatctg
      661 cgcgcaaatc gcaaccggcg aatccggcgc gccgtgatcg ttgatgttga tgagacagtg
      721 ctcgataaca gtccgtacca agggatgacc gttaagacaa gaacggccta cgaatcgaaa
      781 tcctggctct cctggtgtga aaaagctgaa gccgccgcga tccccggtgc cgttgagttt
      841 ctccgctacg cgaattcacg aggcgttcgc gtgttctacg tcaccaatcg tcgcgaatca
      901 gagaagcagt gcactgccca aaatctgaag aaagtgggct tccctgatgt cagtgacgag
      961 actgtgctcg tgcgaactgg cgtctcaagt aaacaaccgc ggcgagatgg catagctcgg
     1021 aagcatcgcg tggtgctttt gatgggcgac aacttgaacg acttcgctga gatcttcgaa
     1081 cagagtaaaa cgatcgatag tcggcttgcg gccaccactc agaataaatc taatttcggt
     1141 agccggttta tcgttctgcc caacgtgatg tacggcgctt gggaagaagc gatgtacggc
     1201 gacccttcga aattgactga ggagcagaag gcggaaaaga gaagaaatac cctgaaggac
     1261 ttcaaaggca actagccgag gatcattgcg atgtcgagcg tgagccctgc gacgttcgtc
     1321 gattcaaacc gttcaccacg attgagaatc tggttcactt gatactctcc catttcaggc
     1381 cgcgagaaat actcaagccg atcgtcaggt aaattaaaca gcaacgcttc tgaaattccc
     1441 gcgcgcgcgt acagcggcat cttggtgtgc cggtcgtact gaactgtcgt gtcggaaact
     1501 tcgatcacca acagaacgtc atccggccgt ggatgaccat cgcgataata atcctggcga
     1561 aactttagaa gcgcgacatc cggctgcggc tcagacaaat cgcttaaccg aatgggatcc
     1621 tgagtgctca cgatcgcgtc gaccccgact tgttgaataa gaatgaggtt caaaagctta
     1681 acgcatgccg catggcggct tgcgatggga gacatttcga taatctctcc ttcgatcagt
     1741 tcgacgcgcg cgtcgggtgg aaaaattccg ttttcgccca tgcgttcgta ctcactgacc
     1801 gtgaagtgat ttttgagatt ggctgacatg gctattgggt acgtgaaact gcgcggagta
     1861 taacacgggg ttgggccgca aaaatgttgc aacgtcaggc tcttgggact agcggttgtt
     1921 ctttttctta gcggcctcgg ctacttcctc tttgatttcg ctttccaact tttcggtttt
     1981 gatatcgagc cgcagccggt tgtaaacgct catgtactga ttcgcgatcc atacaagcga
     2041 aaaaaaggcg atcagatagc ctcgccaatc cggaaacagc aacttaaagc gcgtgatgat
     2101 taggaacgcc gcggcgatgt agtgactgaa gcagtactcg caggtgaaca gatagaagaa
     2161 ctttcgctgg taccaacgcc ggcaaccctc actgcgacgt ttgcagaact cacgcggctc
     2221 gcgaaagacc tcttcgtgcg tcaccgtcca ggcgacgcag gcaatcggaa tcgccagcag
     2281 aaacagctc
//
LOCUS       DATDBY010000531         2289 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1474441, whole genome shotgun sequence.
ACCESSION   DATDBY010000531 DATDBY010000000
VERSION     DATDBY010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1474441"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..403
                     /locus_tag="VIT19_09895"
     CDS             <1..403
                     /locus_tag="VIT19_09895"
                     /inference="COORDINATES: protein motif:HMM:NF014026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HEY5839336.1"
                     /translation="VLDDRSSEAEVKKALDAAGRADVVLVSMYGRVRSGQARSVALPE
                     PGAKALNTLLERRKPLVGISFGNPYLLMNFPKLQTYMVAYGDMPSLQKATAEALLGKN
                     NISGRLPISLPGLYPLGAGIQLKASSTQSQE"
     gene            400..>2289
                     /locus_tag="VIT19_09900"
     CDS             400..>2289
                     /locus_tag="VIT19_09900"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY5839337.1"
                     /translation="MITRHPKLVVALALLLARSISAQVPSGPATAGVSTDRLARIDVV
                     VAESIKNKELPGAVVVAGHRGRVVWRKAYGARAVEPQREAMTTDTMFDLASLTKVVAT
                     ATSIMILVERGEVRLNDPAVKFIPEMKGAGRDAITIAQLLTHVSGFAPDFDLRERWTG
                     HDEAMKRLYREPLRSTPGTRFVYSDIGYIALGEVVRRVSGSPLDEFARRNVFVPLGMR
                     DTGFRPAGNSQRIAPTEKRRGQMNYLGDSGADAGTDGEQWLRGQVHDPTSFRMAGVAG
                     HAGLFSTADDLAIYCQMILNGGSYRGVRILSPMAVATMTRPHAVSETGAARGLGWDFA
                     SSFSVNKGDLFPLGSFGHTGFTGTSLWIDPASDTFVVFLSNRVHPDGKGDVGSLRARV
                     ASIVAGAITDATVAKARAQAADASTELLASLARWNTPRASPPAMVPDAQVLTGIDVLE
                     RDGFKQLAGMRIGLITNHTGRNRAGRSTIDVLFKAPGVKLVALFSPEHGIRGQLDVDK
                     ISDAKDEQTGLPIYSLYGESRRPKPEHLKDLDALVFDIQDVGARFYTYISTLGYAMEE
                     AAKFKLPVYVLDRANPINGVDVEGPIADSDKFSFVVYHAIPVRHGMTVGELARLFNEQ
                     RKIGAD"
BASE COUNT          449 a          635 c          717 g          488 t
ORIGIN      
        1 cgtcctcgac gatcgttcgt cagaggctga agtgaagaag gccctcgacg cggcgggacg
       61 tgccgacgtt gtgcttgttt cgatgtatgg ccgcgtgcgt tcaggccagg cgcgcagcgt
      121 ggcgctgcca gagcccggcg caaaagcact gaatacattg ctcgagcggc gtaagcccct
      181 ggttgggatc agctttggca atccttatct gctgatgaat tttccgaagc tgcaaactta
      241 tatggtcgcg tacggtgaca tgccgagctt gcagaaagcc actgctgaag ccttgcttgg
      301 aaagaacaac atttcgggcc gtttgccgat ttcgcttccg ggtctgtatc ctctcggcgc
      361 tggaattcag ttgaaggcta gttccactca gtctcaggaa tgatcactcg acatccgaaa
      421 ctggtcgtcg cgcttgcgtt gctgctggcg cgttcgatct cagcccaggt tcccagcgga
      481 cctgccaccg caggtgtttc caccgatcgt ctcgcgcgaa tcgacgtcgt cgtcgcggaa
      541 tcaatcaaga acaaagaact gccgggagct gtggtagtgg cgggccatcg cggtcgcgtc
      601 gtttggcgta aagcgtacgg cgcgcgtgcc gtcgagccgc agcgcgaagc gatgaccacc
      661 gacacgatgt tcgatctcgc gagtctcacg aaagtcgtcg ccacggctac gagcatcatg
      721 attctcgtcg agcggggcga agtgcgactg aacgatccgg ccgttaagtt cattccggaa
      781 atgaaaggcg cgggccgcga cgccatcacg atcgcgcaac tgctgacaca cgtgagcggt
      841 tttgcccctg atttcgatct ccgcgaacgt tggacgggtc acgacgaggc gatgaagcga
      901 ctttatcgcg aaccgttacg cagcacgccg ggcacgcgct tcgtctacag cgacatcggc
      961 tacatcgcgc tgggtgaagt tgtgcgacgc gtcagcggaa gtccacttga tgagttcgcg
     1021 cggcgaaatg ttttcgtgcc gctgggcatg cgagacacgg gttttaggcc ggcgggcaat
     1081 tcgcaacgta tcgcgccgac cgaaaagcgt cgcgggcaaa tgaactatct cggcgacagc
     1141 ggcgcggatg ccggtaccga cggtgagcaa tggttgcgcg gtcaggttca cgatccgact
     1201 tcatttcgca tggcgggagt cgccggccat gcgggacttt tttcgactgc tgacgatctc
     1261 gcgatctact gtcagatgat cctgaatggt ggcagttatc gcggcgtgcg aattctgagt
     1321 ccgatggccg tggccacgat gactcggccg cacgcagtca gcgaaacggg cgcagcgcgt
     1381 ggcctgggct gggacttcgc aagttcattc tcagttaaca aaggtgatct ctttccgctc
     1441 ggttcgttcg gtcacacagg attcacggga acgtcgctgt ggatcgatcc cgcgagtgac
     1501 acgttcgtcg tctttctcag caatcgtgtg catcctgatg gcaaggggga cgtgggttcg
     1561 ctccgtgcac gcgtcgcgtc gatcgttgcc ggcgcgatca ccgacgcgac agtcgccaaa
     1621 gcgcgcgcgc aagcagccga cgcgtcaacg gaattgctgg cgagcctggc gcgatggaat
     1681 acgccaaggg cgtcaccgcc tgcgatggtg cctgatgctc aggtactcac gggcatcgat
     1741 gtcttggagc gggacggctt caagcaactt gccggaatga gaatcggttt gattactaac
     1801 cacacgggcc ggaatcgcgc gggccgctca acaattgatg ttctgttcaa agcgccgggc
     1861 gttaagcttg tcgcgctgtt ttctcctgag cacggcatcc gcggtcagtt agacgtggat
     1921 aagatttcgg acgcgaaaga cgagcagacc ggcttgccca tctattcgct ctacggcgag
     1981 tcacgacggc cgaagcctga gcacctgaag gatctcgatg cgctcgtttt cgacattcag
     2041 gatgtcgggg cgcgttttta cacttacatt tcgacgcttg gttatgcgat ggaagaagcg
     2101 gcaaagttta agctgcccgt ttacgttctc gatcgcgcga atccgattaa tggggtggac
     2161 gtcgaagggc caatcgccga cagcgacaag ttttcatttg tggtgtatca cgccattcca
     2221 gtgcggcacg gaatgacagt tggcgaactc gcgcggctgt tcaacgagca gcggaagatt
     2281 ggcgcggat
//
LOCUS       DATDBY010000532         4150 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1680814, whole genome shotgun sequence.
ACCESSION   DATDBY010000532 DATDBY010000000
VERSION     DATDBY010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4150
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1680814"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(413..769)
                     /locus_tag="VIT19_09905"
     CDS             complement(413..769)
                     /locus_tag="VIT19_09905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839338.1"
                     /translation="MFFRLGRYFETEEIVQVILIFTPLTGFYATAVVKYYAEIAEHPA
                     NQATLDFTFCSISIFLCVSFVFAIFYAILDFPEGVIKTKDGLKSTVAGIETALGVLLG
                     IVVTKLFPAAGSSPRT"
     gene            complement(851..2047)
                     /locus_tag="VIT19_09910"
     CDS             complement(851..2047)
                     /locus_tag="VIT19_09910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839339.1"
                     /translation="MFKAVIVAALLSAAISVAQSSRASANDLTQLFSDAEIAQRLQFL
                     DPANRMYFVIDKTGRDWICAINFDPKEVTYHGTETKDCSYNQTTRSFFGRWRGNSPIQ
                     SIEGKVSADKHLIFWRHFLDARVQFKDGRSENIKLRGAQFRLPNKAGCYYRPLTGYTI
                     TSVVLVDIAKTRDAKGYLERLARPRGWGVSDHESTFPQEHLTFKVSVGAFEGLQALEL
                     FSKDDRVICAEFFLDRGGPPPMNVTDITYGKVLDGRKAAHLTSDIHKWLQEFFDAGPV
                     RITSVRQRSSSHYSVAIVAPSRAAKFDDDSSAWVRLEIDIGLGVGYSTKKQDLADLIM
                     VSLLDVKSAKAPINRPEPPEELFVVLPYMAKESVTSWGKKMNRWNETFMTFLARRYDG
                     VVEGFQ"
     gene            complement(2204..2425)
                     /locus_tag="VIT19_09915"
     CDS             complement(2204..2425)
                     /locus_tag="VIT19_09915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839340.1"
                     /translation="MPPRQAGVSVRIKVVANEIFVKEEDLEDHILVLEAKAEKVDLKQ
                     LLPMKPDSGTTNIRNRPRPIKQCRSSGWA"
     gene            complement(2506..2691)
                     /locus_tag="VIT19_09920"
     CDS             complement(2506..2691)
                     /locus_tag="VIT19_09920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839341.1"
                     /translation="MTYQDSYRQQAAKLRRQARREHNVSTRRDLEILAKGYDRLANQA
                     QAHRPEQRRVRARSRSH"
     gene            complement(3346..3741)
                     /locus_tag="VIT19_09925"
     CDS             complement(3346..3741)
                     /locus_tag="VIT19_09925"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEY5839342.1"
                     /translation="MVIDTSALIAILFDEPERRSFEIAIEQDSLRLISAVTLFEAGMV
                     MVGRYDRAGTERLERLIQAIAPTVVAFDEHQAQIARNAFIRYGKGRHRAGLNFGDCAA
                     YALAIAEAEPLLFKGTDFAATDVEVVALG"
     gene            complement(3741..4004)
                     /locus_tag="VIT19_09930"
     CDS             complement(3741..4004)
                     /locus_tag="VIT19_09930"
                     /inference="COORDINATES: protein motif:HMM:NF019324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /protein_id="HEY5839343.1"
                     /translation="MALNIKNAETERLVRELARRRGQGITEALTDVVRREVERERRKP
                     RRESSEEFHRRIQAIVDDVKKLPVLDDRSPDQIIGYNEHGHFD"
BASE COUNT          885 a         1221 c         1105 g          939 t
ORIGIN      
        1 aggtgctgct gccgcagacc aagcagcaga tcacgctgcg gctcgatccc gaggtcattg
       61 gttttttcaa acggaccggc aaaggctatc aatcgcgcat gggcgcggtg ttgcgcagct
      121 acgtggaagc gaagcgcgaa aaaatcagat agcggttcgc ggcgctcttg cggagccgtt
      181 cactcttcgc gatacggcgc ctggctaccg cttggcgtcg gccggctcat ggcgccgtgg
      241 ttcgcacagc tcccttattg aacagggcgg tatgattgcc ccagcattcc cgacacggct
      301 ttgtctcgcg ggcgatagtt caaagtacgg cccgccgacc agacgctcaa tacgatcgcg
      361 gaagcagtca catttgtggc tatcccagcg ccgcttttcg atcccgaggc gcctacgtcc
      421 ttggcgaact gccagctgca ggaaagagct tggtgacaac aattccaagc aagactccga
      481 gcgcagtttc gatacctgcg acagtactct ttagaccatc cttcgtttta atcacgccct
      541 cggggaaatc aagaattgcg tagaagattg cgaaaacaaa agacacgcac aaaaaaatgc
      601 ttatcgagca gaatgtgaaa tcaagcgtcg cctgattggc tgggtgttcc gcaatctctg
      661 cgtagtactt aacaactgca gtcgcataga agcccgttag cggcgtgaat atcaggatca
      721 cttgaacgat ttcttcagtt tcgaaatagc gacccagtct aaaaaacatc aaaaatatcg
      781 ccgcaacgtg gccgccaatt agcaaggcag cgaggaggct tcggactgta ctctgcttca
      841 aacgcttccc ctattgaaag ccctcaacga caccatcata tcgacgtgcc aggaaggtca
      901 tgaatgtctc attccatcgg ttcattttct taccccaaga cgtgacgctc tcttttgcca
      961 tataaggaag aacaacaaac agttcctcgg ggggctcagg tcgattgatg ggcgcctttg
     1021 cactcttcac gtccaataac gacaccataa tcaagtcggc caagtcttgc ttcttcgttg
     1081 aatatccaac ccctaggcca atatcaattt ccaagcgaac ccacgctgac gaatcgtcgt
     1141 caaactttgc ggctcgactg ggcgcgacaa tagctaccga atagtgcgaa ctcgatcttt
     1201 gcctgacgct ggttattcgt acgggaccgg catcaaaaaa ttcttgaagc catttatgta
     1261 tatccgacgt taaatgcgcc gccttgcggc catccaaaac cttaccgtac gtaatgtcag
     1321 ttacgttcat aggcggcggg ccacctctgt ctaaaaagaa ctcagcgcat atgacgcgat
     1381 cgtctttgga gaacaattca agcgcttgca gtccttcaaa agcaccaacg gaaactttga
     1441 aggtcaggtg ctcttgaggg aatgtgctct cgtgatctga cacgccccac cctcgtggtc
     1501 gagcaagtcg ctcaaggtaa cctttggcgt cccgcgtttt ggcgatatcg actaacacca
     1561 ccgacgtgat cgtgtagccc gtcagaggtc gataataaca gcctgccttg ttcggtagac
     1621 gaaattgggc gcctcggagt ttgatatttt cggatcgtcc gtctttgaat tgcactcgcg
     1681 catctaaaaa gtgccgccaa aagattaagt gtttgtcggc agacacctta ccctcgatgc
     1741 tttgaatggg agaatttccg cgccacctgc caaaaaaaga acgggttgtc tgattgtatg
     1801 aacagtcttt agtttctgtc ccatgatagg taacttcctt gggatcaaaa ttgatcgcac
     1861 aaatccaatc cctgcctgtt ttgtcgatga cgaagtacat tctgttggcc gggtcaagga
     1921 attggaggcg ttgagctatt tctgcatcac tgaaaagttg agtaaggtcg ttggcgcttg
     1981 cccttgaaga ttgggcaact gaaattgcgg cgctcagcag cgctgctacg atcaccgcct
     2041 tgaacatgcc aagtctccca tggcgagatg gtacgcgaac gtgcgcaacg aacctatccg
     2101 gctactactg ccacgagcat ttcagcacac gcaggtgttg cggccaagtg ttgtctagcg
     2161 cagcccaacc gccgaggagc gacctaaaca gtgttgtctt tctttacgcc catcctgacg
     2221 atctacattg ttttatcggg cgcggacggt tgcgaatgtt ggtggtgccg ctatccggtt
     2281 tcatcggcag gagttgcttg agatcgacct tctcggcttt ggcttcgagc acaaggatgt
     2341 gatcctccag atcctcctcc ttcacgaaga tctcgttcgc caccaccttg atgcgcaccg
     2401 acacgcccgc ctggcgcggc ggcaaccccc ggtgcctttg ggccaggatt tccgatcaag
     2461 catacactgc ggcagacttc ccacagcggt gcaaccagaa ccgtctcaat ggcttcggga
     2521 tctcgcgcgt acacgacgtt gttccgggcg gtgcgcctgc gcctgattgg ccagccggtc
     2581 gtaccccttg gcgagaatct ccagatcacg gcgcgtcgac acgttgtgct cgcgacgggc
     2641 ctgccgcctc agtttcgcag cttgctgacg atagctgtcc tggtacgtca tggttcctta
     2701 cgtcgattgc atcttgcagc caggcactga tcagccggcc tttggtgacg gttgaaaacg
     2761 tcggcactca cattggcact cgggttggac catcgcaacg agacaagagg ccacgtcccc
     2821 gccgcgtctg ctcgaccagc agccggcaac gatttacctt tccgggatgg gaaaaatttt
     2881 tgtgatcagt cgcctgatca ccgcgcggcg atcgcggcgg cgcgcgtcgc aacgacttcg
     2941 cgaacggtgc aaatggcggg ccgctgaggt ttgcgcccgg acaaaccacc atcgcatctg
     3001 gacgcggtag cgccggatgc ttcctgatgc gttttcgtgg aaccatgcat cgcgcgacga
     3061 ctcaaagatc acgccggcgc gggcgagcag gaggcggccc caccacgggt cggtcgactt
     3121 caagccgacg ccgcggtgag accctgcctc ccccaatggt cccccattca gggtcacagg
     3181 cggcaacacc aacttccggg acggtgaagc cgcgctatcc aagttgcgtg cgcactgtgg
     3241 ttctttggtg gcgttccaat ctgcttcagc gcgttggcgt gacgctcagc attgtgaagt
     3301 caggatcggg cagcttctct caggtcgcgc acggccacag ccagttcatc ccagcgccac
     3361 cacctccacg tctgtcgcag cgaaatcggt gcctttgaac agcagaggct cggcctcggc
     3421 gatggcgagc gcgtaggcag cacagtcgcc gaagttcaag cccgcgcgat ggcgcccctt
     3481 cccgtaacgg ataaaggcgt tgcgggcgat ctgcgcctga tgctcgtcga aggccaccac
     3541 cgtcggcgca attgcttgaa tcaaccgctc cagacgttcg gttcctgccc ggtcgtagcg
     3601 gcccaccatg accatgccag cctcgaacaa cgtcacggcc gatatcaatc gcaacgagtc
     3661 ctgctcgatg gcaatctcga atgaccggcg ctccggctcg tcgaacagga tggcaatcaa
     3721 ggccgaggta tcaatgacca tcagtcgaaa tggccgtgct cgttgtagcc gatgatctgg
     3781 tcgggacttc gatcatcgag aacgggaagc ttcttcacgt catcgacgat ggcctgaatg
     3841 cggcgatgga attcttcgct gctttcgcgc cgtggcttac gccgctcgcg ctcgacctcg
     3901 cgtcggacca cgtcggtcag cgcctcggtg atcccctgcc cgcgccgccg cgcgagttcg
     3961 cgcaccagcc tttcggtttc tgcgttcttg atgttgaggg ccatggcatt atccaaatct
     4021 accttcttcc tatatttctt tattcttcct tctgcaaggc atccatccta atgtattgaa
     4081 atacttgtct ttctgctggc cgatttgagc tggctaatcg tgcgggcgcg ctaccgcttc
     4141 gcgcccttcg
//
LOCUS       DATDBY010000533         2330 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1419155, whole genome shotgun sequence.
ACCESSION   DATDBY010000533 DATDBY010000000
VERSION     DATDBY010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2330
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1419155"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            155..922
                     /locus_tag="VIT19_09935"
     CDS             155..922
                     /locus_tag="VIT19_09935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839344.1"
                     /translation="MILLKEGLLIAIVLWSTICVQAQPNFQGLPKNATIVETRMLPST
                     ARANRMLVLWMLNPRKNPTNYPPDEIYSCPEQTRGSHYSGPTRVSLVDSANGKLINTI
                     KIFTGDDEDSFDLPYQIRKGYYYRVPALVRTGIEAKPNLIWLKDYNGDGKALEFALFD
                     AVACMGLQTTLIGYSGRQDRVIQYPVKLEVIEGANHATRTSLWADYLFGSKPRRPGYW
                     KYEIDYRGRGGSFDKWEVRYNPAKEQFEGKLIMTPGD"
     gene            948..1340
                     /locus_tag="VIT19_09940"
     CDS             948..1340
                     /locus_tag="VIT19_09940"
                     /inference="COORDINATES: protein motif:HMM:NF018684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HEY5839345.1"
                     /translation="MKSIKRPIMLIVALLLSSISIAGQKPKDDPCPGAQSQLEMNQCA
                     GKAYKAADGELNQVYRKLVAMLDAEDKAQLKVVQTAWLKYRDAHCEFVGDMYKGGSIR
                     PMIHAFCLADVTRNRTTELKGQIEDRDQ"
     gene            1345..2109
                     /locus_tag="VIT19_09945"
     CDS             1345..2109
                     /locus_tag="VIT19_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002487914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HEY5839346.1"
                     /translation="MLENKNGIIFGVANKRSIAWATAQALHEAGARLAFAYQGERLKD
                     NVESLTKAEMPDAPLFSCDVTKQEEIDATFQSLGEKFGRLDFVIHSIAFAPREALEGE
                     FMKVDRDGFLTAMEISAYSLTQLARAAAPLMTEGGSIVTMSFHGAEKVYQGYNVMGVA
                     KAALEASVRYLASDLGPKNIRVNAVSAGPIQTLSARGVAGLSTMLKHHAERAPMKRNV
                     EVREVGNTALFLCSPLSSGITGETIYVDCGYNIMGL"
BASE COUNT          567 a          610 c          657 g          496 t
ORIGIN      
        1 tgcggaaagg cttcgccttt ccgagaatca gaccccttaa ccgttcccat tcgcgaggct
       61 gagcctcgcg aatggtttag acagaatttc tttttcgcga cggtaaggcc aagccttacc
      121 gcacatcagc cggcagagcc ggatgtgaaa cccaatgatt cttttgaagg agggcctgct
      181 gatcgccatt gtgctgtggt caacgatctg cgttcaggcc caacccaact ttcagggcct
      241 tcccaaaaac gccacgattg tcgaaacacg gatgctgcct tcgactgctc gcgcaaaccg
      301 catgctggtg ctgtggatgc tgaacccgcg caagaaccca accaactatc ctcctgacga
      361 gatatattcc tgtcctgaac aaacccgggg aagccattat tcagggccaa cgcgtgtttc
      421 gctcgtagac tcggccaacg gcaaactcat taacacgatt aagattttta ccggtgacga
      481 cgaggacagc ttcgatctgc cgtatcagat ccgcaagggt tattattacc gggtaccggc
      541 gttggtaagg accggcatcg aagcaaagcc aaacctgatc tggctgaaag actacaacgg
      601 tgacggtaaa gcgctcgagt ttgccttgtt cgacgcagtt gcttgtatgg gccttcagac
      661 cacgctaatc ggctatagtg gaagacagga tcgagtcatt cagtatccgg ttaagctgga
      721 agtcatcgag ggcgcgaatc acgcgacgcg gacatcgctt tgggccgact atcttttcgg
      781 ttcaaaaccc cggcgcccag gttactggaa atacgagatc gattatcgtg gccgcggcgg
      841 ttcgtttgat aagtgggaag tgcgttataa cccggcaaag gaacagtttg aaggcaagct
      901 gatcatgact ccaggtgatt agaggctttt acatgacgat gcgacaaatg aaatcaatca
      961 agcgcccgat catgcttatt gtggcgctat tactctcgag catttctatc gccgggcaga
     1021 agccgaagga cgatccctgt cccggtgctc aatcgcagct ggaaatgaat cagtgtgccg
     1081 gtaaagcata caaagcggcc gacggcgaat tgaaccaggt ctaccgcaaa ctggtcgcga
     1141 tgctggacgc ggaagataag gcgcagctta aggtggttca gacggcttgg ctgaaatatc
     1201 gagatgccca ctgtgaattc gttggcgata tgtacaaagg cggcagcatc cgaccaatga
     1261 ttcatgcttt ttgcctcgcc gatgtcacca gaaaccggac cactgaactc aagggtcaaa
     1321 tcgaagatag agatcaataa actcatgctt gaaaacaaga acggaattat cttcggcgtc
     1381 gccaacaagc gctcgatcgc gtgggcgacg gcgcaggcgc tgcacgaagc cggcgccagg
     1441 ctcgcgtttg cctaccaggg tgaacggcta aaagacaacg ttgagagtct gactaaagct
     1501 gagatgcctg acgcgccgct gttttcgtgc gatgtaacta agcaggaaga aatcgatgcg
     1561 acatttcaaa gtctcggcga gaaattcggc cggctcgatt ttgtgatcca tagcatcgct
     1621 tttgcaccgc gcgaagcgct ggaaggcgaa ttcatgaagg tagatcgcga cggctttctg
     1681 acggcgatgg aaatcagtgc ctactcgctg acgcagctgg ctcgtgctgc ggcgccgttg
     1741 atgaccgagg gtgggagcat cgtgacaatg agctttcacg gcgcggagaa agtttaccag
     1801 ggttacaacg tgatgggcgt cgcgaaagcg gcgttggagg cgagcgtgcg ctatctcgcc
     1861 agcgacctcg gcccgaagaa catccgcgtg aacgctgtca gtgccggacc gattcaaaca
     1921 ctttccgctc gtggcgtggc gggtctcagc acaatgttga agcaccacgc ggagcgtgcg
     1981 ccgatgaagc gcaatgtcga agttcgcgag gttggcaaca cggcgctttt cctgtgcagt
     2041 cccctctcct cgggcatcac cggcgaaaca atctacgtcg attgtggcta caacatcatg
     2101 ggactataag tggcgcaggt tgctaacttg cgagtaccgc aaggtgttaa cttgcgatga
     2161 tcagcaagat aacatcttgc tttacacgta tgaaaaacga cgactacaga gacattccgg
     2221 gcggcactca tgacgagcgt ctgctcgaga cgccgcggcc ggacgagttc ctgcatacgg
     2281 acacctggcg cgtcttccgc atcatgggcg agttcgttca aggtttcgaa
//
LOCUS       DATDBY010000534         3412 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1691911, whole genome shotgun sequence.
ACCESSION   DATDBY010000534 DATDBY010000000
VERSION     DATDBY010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3412
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1691911"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1624
                     /locus_tag="VIT19_09950"
     CDS             <1..1624
                     /locus_tag="VIT19_09950"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5839347.1"
                     /translation="EVMDVTGLSERRDVPVSQLSGGQRKRVSIAVELITKPSVIFLDE
                     PTSGLDPATEEKIMKLFRQIAESGRTVVLTTHAMENVKLFDKIVVLMRGKLVFYGAPQ
                     DALAHVKAESFKDLYDKLEDPVDQRIAAMPALPPNAPKSQKQAHKQQREQIAEQVADE
                     WKQKFQTTEHYRRNVAEPLSVLPRDGRAAAPPKRHTTVTDSIRQWGTLTRRYMEVLSR
                     DKFNLLILLVQAPIIAFLTYLVVGDTLPRDFPYFVLGLVALWFGTSVASREIIRERAV
                     YTRERMVNLGLMPYVGSKIFVLALIVVVQCLMLFGALKMMHYVGLMSVPGWLVPQLAI
                     VFITAMVGIALGLFVSAIVKTSEMATSLVPLILIPQILFSGLVGVPEGASKAIGTLMP
                     ATWAFDGLKQFSTLDTLDEEGSDPDGENEGKGLYKHYEALNDRNIEQARQDVEDYKKD
                     AEQDLKDYEKKMKDYVKDLQAGRQSDQPDAPKLKDPPEVKGAEKIPEDVSNYISFLHP
                     WGNKIIDPFVLMFMFLALVIATLVTLKAQDIL"
     gene            1678..2031
                     /locus_tag="VIT19_09955"
     CDS             1678..2031
                     /locus_tag="VIT19_09955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839348.1"
                     /translation="MANEQFERHMQFIVEQQAQFAVDIQQLKEAQAELTTKHNHLTEA
                     LTTVVGMVGKLAQAQDRTDEQLAELTNKQAETDDRLNTLIGVVERYFSGNGASPKKPK
                     SKSSSARKPKRGPRG"
     gene            complement(2045..3154)
                     /gene="trxB"
                     /locus_tag="VIT19_09960"
     CDS             complement(2045..3154)
                     /gene="trxB"
                     /locus_tag="VIT19_09960"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEY5839349.1"
                     /translation="MPTQELHRQVVIIGSGPAGLTAAIYSARANLNPLLVDAPADTEK
                     QTTPGGQLMITTEVENYPGFAEGIQGPDLMVQFRLQAERFGTEFLEEWITRVDLSERP
                     FKLFSEDKVITTETLIIASGASAKWLGIPGEAKTPHGFGGNGVSACATCDGPLPAFRN
                     KRLVVVGGGDTAMEEATFLTRYASRVFVVHRRDKLRASKIMQDKALHNEKIEFIWNTG
                     VEEILGTHEQGVTGVRLRNLQTDETTDFECEGVFIAIGHKPNTDLFKGQIDMDDVGYI
                     VTSGRSTATNIPGVFAAGDVQDSVYRQAVTAAGTGCMSAIDAERFLDHLPIAMPTGEE
                     VTIEGEHLSKDHSVLTLPTGEVVSNVPEKPMFEDC"
BASE COUNT          778 a          972 c          954 g          708 t
ORIGIN      
        1 cgaagtgatg gacgtcaccg gtttatcaga gcgccgcgac gtgccggtaa gccaactctc
       61 cggtggacaa cgcaagcgcg tttcaatcgc ggttgagctg atcacaaagc cgtcagtgat
      121 ctttcttgat gaaccaactt cgggtctcga tccggcgacc gaagaaaaga tcatgaagct
      181 ctttcggcaa atcgccgaga gcggccgcac cgtcgtgctg acgacgcatg cgatggagaa
      241 cgtaaagctc tttgacaaga tcgtcgtgct gatgcgcggc aagcttgtgt tctatggcgc
      301 gccgcaggat gcgctggctc acgttaaggc tgaaagtttt aaagacctct acgacaagct
      361 ggaagacccc gttgaccaac gcatcgcggc gatgccggca ctgccgccca acgcgccgaa
      421 atcgcagaag caggcacaca aacagcagcg ggagcagatt gccgaacaag tcgccgacga
      481 atggaagcaa aagttccaga cgaccgagca ctatcggcgc aacgtcgccg agccgctcag
      541 cgttttgccg agagacggcc gcgccgccgc gcctccaaaa cgccatacga cggtcactga
      601 ttcgattcgg caatggggca cgctcacgcg ccggtacatg gaagtcctga gccgcgacaa
      661 attcaatctg ctgattctct tagtccaggc gccgatcatc gcctttctga cgtatctcgt
      721 tgtcggtgac acgctgccgc gcgactttcc atatttcgtg ctcggactgg tcgcgctctg
      781 gttcggcacc tcggtcgctt cgcgcgaaat catccgcgag cgcgccgtat acacgcgcga
      841 gcgcatggtg aatcttgggt taatgcctta cgtcggctcg aagatttttg tgctggcgct
      901 gatcgtggtc gtacagtgct taatgttgtt cggcgcgctc aagatgatgc attacgtcgg
      961 cttgatgagc gttccgggat ggctggtgcc gcaactggcg attgtcttca ttacggcgat
     1021 ggtgggcatc gcgctgggtt tgttcgtctc ggcgatcgtg aaaacgtccg aaatggcgac
     1081 gagcctcgtg ccgctaattc tgatcccgca aattcttttt tccggtctgg tcggcgttcc
     1141 cgaaggcgct tcgaaagcga tcggcacgct catgccggcg acgtgggcct ttgacggatt
     1201 aaagcaattc tcgacgctcg atactctgga cgaggaaggt tccgatcccg acggagagaa
     1261 tgaagggaag ggtctctaca agcactacga agccttaaac gaccgcaaca tcgagcaggc
     1321 gcgccaggac gttgaggatt acaagaagga cgcagagcag gacttgaagg attacgagaa
     1381 gaagatgaag gactacgtca aggacttaca agccgggcgg caatccgatc agccggatgc
     1441 gccgaagctg aaagatccgc cggaggtcaa aggcgccgaa aagattcccg aggacgtcag
     1501 caactacatc tcgttccttc atccctgggg taacaagatc atcgatccgt tcgtcctgat
     1561 gtttatgttc ttagcgctgg taatcgcaac cctcgtaacg cttaaggcgc aggacattct
     1621 gtgacgacct cagcaaagag gcgcgtgata taatcgcgcc aattcggaga cactcacatg
     1681 gccaatgaac agttcgagcg ccatatgcaa ttcatcgtcg aacagcaggc gcagttcgcg
     1741 gttgatattc agcagctaaa ggaagcgcaa gccgaactca cgactaagca caatcatcta
     1801 acggaagcgc tgacgacggt cgttggaatg gtaggcaagc tcgctcaagc tcaggaccgc
     1861 accgacgaac agctcgcaga acttacaaac aaacaggcag agactgacga tcgattgaac
     1921 actctgatcg gcgtcgttga gcgatacttt agcgggaatg gtgcttcacc aaagaaaccc
     1981 aagtctaaat ccagcagcgc gcgtaagccc aagaggggcc caaggggcta gcggcacctg
     2041 cgcgtcagca atcttcaaac atcggctttt ccggaacatt cgaaacaact tcacccgtcg
     2101 gcagggtgag cacgctgtga tccttagaca gatgctcgcc ttcgatagtg acctcttcac
     2161 cggtcggcat ggcgatcggt agatgatcga gaaatcgttc ggcatcgatg gcagacatgc
     2221 agcccgttcc cgccgccgtg actgcctgcc gatagactga atcctgcaca tcgccggccg
     2281 cgaagacacc cggaatgttc gtcgcggtcg agcgacctga ggtgacgatg tacccaacgt
     2341 cgtccatgtc gatctgacct ttgaacaaat ctgtatttgg cttgtggccg atcgcgataa
     2401 agacgccctc gcattcgaaa tcggtagttt cgtctgtctg caaattgcgc agccgcacgc
     2461 cggtcacgcc ttgctcgtgc gttcccaaaa tctcctcaac tccagtgttc cagatgaatt
     2521 cgatcttctc gttgtgaagc gctttgtcct gcatgatctt cgacgcgcgc agtttgtccc
     2581 gccgatgaac gacgaacacg cgcgacgcat agcgcgtcag gaaagtagcc tcttccatgg
     2641 ccgtgtcgcc gccgccgacc acgaccagac gcttgttgcg aaacgcgggc aatggaccgt
     2701 cgcaagtcgc gcaagccgac acgccgttac caccaaagcc atgcggagtc tttgcctcac
     2761 ccggaatccc cagccatttc gccgacgcgc cggaagcgat gatcaatgtc tcagtcgtga
     2821 tgactttatc ctcgctgaac aacttgaaag ggcgctcgct gagatcgacg cgcgtgatcc
     2881 attcttccaa aaactcagtg ccaaagcgtt cagcttgcag gcgaaattga accatcaggt
     2941 ccgggccctg aatgccttcc gcaaaacccg gatagttttc cacttcagtg gtgatcatta
     3001 actgcccgcc cggcgtggtt tgtttctcgg tgtcggcagg cgcatcaacc agcagcgggt
     3061 tcaaattcgc gcgcgcgctg tagatcgcgg cggtcaatcc cgctgggccg gaaccgatga
     3121 ttactacctg gcgatgaagt tcttgtgtgg gcaaggaagg cctcctctac tctgttagcg
     3181 attggcaaat gagccgtttg aaagccgcgt gactgacaca gatggcttaa tgatccggtc
     3241 gctaccgctc gcggatctga cagtaccacg ccggaaaact gttggccttt tgcgttgcgc
     3301 gtgtagtata actagtgctg tacgagttag tcgaaccagc caggccccag ccacatcgtg
     3361 gcctgaattg gcatccacct taagggttcg gccgcctaga ttgcgacgtt ga
//
LOCUS       DATDBY010000535         3225 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1308588, whole genome shotgun sequence.
ACCESSION   DATDBY010000535 DATDBY010000000
VERSION     DATDBY010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3225
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1308588"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..633
                     /locus_tag="VIT19_09965"
     CDS             64..633
                     /locus_tag="VIT19_09965"
                     /inference="COORDINATES: protein motif:HMM:TIGR02999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5839350.1"
                     /translation="MSVATVELTGLLEDWKHGDPTALQKLTPLIYDELRRIAHRYAHR
                     ERNGHTLETTALVNEAYLRLAGGEKRDWQNRSHFFAVTAQVMRHVLIDHARRRHYVKH
                     GGEAQQVPIETALLMKSERAAELIALDEALEEFAVLDPRKARVVELRYFGGLSLEETA
                     EAVGLSLMTVRRDWQAAKAWLYRRLKHDS"
     gene            623..2617
                     /locus_tag="VIT19_09970"
     CDS             623..2617
                     /locus_tag="VIT19_09970"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY5839351.1"
                     /translation="MTPERWQKVDEVLQAALDLPVTERAALLAEVRTGDPELHEEALS
                     LIEAHQEAGDFLEAPAMETDAQVLLEAEQPDREIGPYKIVNRLGKGGMGEVFLAQDRR
                     LGRLVALKTLPAYFVSDDERLRRFQTEARAASALNHPNILTIYEVGESDGTHFIAAEY
                     IEGDTLRELISADNLRLAEVLDIAAQLLSGLSAAHAAGIIHRDIKPENIMRRADGSIK
                     ILDFGIAKLLEPASEETTASFAHNQTQTGALMGTIGYVSPEQVRGLPVDSRTDIWSCG
                     VVLHEMLTGRRPFAGVTNADTIVAILDRPPASLFVNGAKVSPLAQLQRIVSKALSKQA
                     DERYRSAADMLEDLNTIKRSLGHESKKRAAISGETTVNELRTLSAETGSHQGLRRYLV
                     PAVLAIVLLIVAGLLYRQSKRETPNPPTPRKTYAQMNEAEQLTFVSEQEQRISAMMGE
                     RPMKLNDDAVRVIKSHVDYHAAQRAVATSPKGEGLSVRYQRAKPYIPVIARAFEARRI
                     PVVVGIYLAMFESAYQACPENEWGAKGMFQFLPQTAEIYGVARSEMCDVNKMAPAAAH
                     YIADRMAELGDDSQSMTLVLLSYNRGAEAVRDALRQLRESDQNYERNFWTLFANRDKL
                     GETFQKESANYVPGFFAVAIIGENPETFELGTPPLSSLAQ"
     gene            complement(2748..>3225)
                     /locus_tag="VIT19_09975"
     CDS             complement(2748..>3225)
                     /locus_tag="VIT19_09975"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5839352.1"
                     /translation="KPIILGASEGWKIASFLKQKDVPVILDSVLNMPLREDDGYDSLY
                     ENASKLQAAGVRFAISTGDSGAHVRDLPFNAGMAAAYGLPKAEALKSVTLYPAQILGV
                     ADRLGSIEPGKLANLVITDGDMLEARTNVRHLFIAGRQLPLVSRHTMLNDQFKDRK"
BASE COUNT          714 a          907 c          952 g          652 t
ORIGIN      
        1 ccctaacagg tgaatccttc gagcgtttcc gcccggacaa agatgataag attgcgaagt
       61 tttatgtcag tcgcaactgt ggaattaacc gggctgttgg aagattggaa gcatggcgat
      121 ccgaccgcgc tgcagaaatt aaccccgctg atttatgacg agctgcggcg catcgcgcac
      181 cgctacgcgc accgcgaacg taatggccac actttagaga cgacggccct ggttaacgag
      241 gcttacctgc gtctggccgg tggtgaaaaa cgtgactggc agaaccgctc acatttcttc
      301 gcggtcacgg cgcaggtgat gcgtcacgtc ctgatcgatc acgcgcggcg gcggcattac
      361 gtcaaacacg gcggcgaagc gcaacaggtt ccaatcgaga cagctctgtt aatgaagagc
      421 gagcgggctg cagagctaat cgctctggat gaagcgctcg aagagtttgc cgtgctggat
      481 ccacgcaaag cgcgcgtggt cgaacttcgt tattttggcg gattgagttt ggaagagacc
      541 gccgaagcag tcgggctttc tttgatgacc gtgcgccgtg actggcaggc ggccaaagcc
      601 tggttgtacc ggcgactgaa gcatgactcc tgaacgctgg caaaaagtcg atgaggtttt
      661 gcaggcagct ctcgatctgc ctgtcacaga acgcgccgcg ttgctggccg aggtgcgtac
      721 cggcgacccg gaactgcatg aagaagcgct ttcgctcatt gaggcgcatc aagaggccgg
      781 tgactttctc gaagccccgg ccatggaaac cgatgcgcag gttttgcttg aagctgagca
      841 accggatcgc gaaatcggac cctacaagat cgtcaaccgg ctcggaaagg gcggcatggg
      901 cgaggttttt ctggcgcagg atcggcggct cggccggctg gtcgcgctga aaaccctgcc
      961 cgcttatttc gtttccgacg acgaacgtct gcgtcgtttt caaactgagg cccgcgccgc
     1021 ctcggcttta aatcatccga acatcctcac catctacgaa gtgggagaaa gcgacggcac
     1081 tcatttcatc gcggctgaat acatcgaagg tgacacgctg cgcgagctga tcagcgccga
     1141 caatctaaga cttgctgaag tcctggatat tgctgcgcag ttgctttctg gtttgtcggc
     1201 ggcgcacgcg gcgggaatta ttcatcggga catcaagcct gagaacatca tgcggcgcgc
     1261 cgatgggtcg atcaaaatcc tcgacttcgg catcgccaaa ttgctggaac cggcgtcgga
     1321 agaaacgacg gcgtcattcg cgcacaacca gacacagacc ggcgcgctga tgggaacgat
     1381 cggctacgtg tcgcctgagc aggtgcgcgg tttgccggtg gattcgcgca cagacatctg
     1441 gagttgcggc gttgtgctgc atgaaatgtt gaccggccgg cggccattcg ccggcgtcac
     1501 caacgccgac acgatcgtag caattctcga tcgtccgccc gcctcactgt ttgtcaacgg
     1561 tgcaaaagtt tctccgctgg cgcaactgca gcggatcgtg agcaaggccc tcagcaagca
     1621 agccgacgaa cggtatcgat ccgctgcgga catgcttgaa gacctaaata caatcaaacg
     1681 gtcacttggt catgaaagca aaaagcgggc ggcgattagc ggcgagacaa ccgtcaacga
     1741 actgcggacg cttagtgctg agacgggttc gcatcaaggg ctgcgtcgtt accttgttcc
     1801 cgcagtcctg gcgatcgttc tgctaatcgt ggcgggcttg ctttaccggc agtccaaacg
     1861 ggaaacgccc aaccccccaa cgccgcggaa aacttacgcg cagatgaacg aggccgaaca
     1921 actcactttc gttagcgaac aggagcagcg catctctgca atgatgggtg agcgcccgat
     1981 gaagttgaac gatgatgcgg tgcgagtgat caagtcgcac gttgattatc acgctgctca
     2041 gagggccgtc gcgacgtcgc cgaagggaga aggtctttcg gtccgctatc aaagagcgaa
     2101 gccttacatt ccggtgattg cccgggcctt tgaagcgcgg cgaatcccgg tggtagtcgg
     2161 catttatctc gcgatgttcg aatcggcata tcaagcgtgt ccggaaaacg agtggggcgc
     2221 caagggcatg ttccaattcc tgccgcaaac ggccgagatc tatggcgtcg cccgttcgga
     2281 aatgtgcgac gtaaacaaga tggcgcccgc cgcggcgcac tacatcgccg atcgcatggc
     2341 cgagttaggc gacgattcgc agagcatgac gctggtgttg ctcagttaca atcgcggagc
     2401 tgaagcggtg cgcgacgcat tgcggcagtt gcgagagagt gatcagaact atgagaggaa
     2461 tttctggacg ctctttgcca atcgcgacaa gttgggcgaa acgtttcaga aagagagcgc
     2521 caactacgtt cccggcttct ttgcggtcgc catcatcggc gagaatcccg aaaccttcga
     2581 actgggcacg ccaccgctct caagtttggc gcagtgaagt cagtaccggg agcggtagcg
     2641 accgggtaat cgttttaaat ctcgaccgta gtgtgaatcg agacccggtc gctaccgctc
     2701 ccggtactga cctcgcgccg ccacagatct agataacttc tactgattta cttccgatcc
     2761 ttgaattgat cgttaagcat cgtgtggcgg ctgaccagcg gcaactggcg cccggcgata
     2821 aacaaatgac gaacgttcgt gcgcgcttcc agcatgtcac catcggtgat cacgagattc
     2881 gcgagcttac ccggctcgat cgaacccaga cgatcggcca ctcccaaaat ctgagctgga
     2941 taaagcgtca ccgactttag cgcttccgct tttggcaaac cgtaagcggc ggccatgccc
     3001 gcgttgaatg gcaagtcgcg cacgtgcgcg cctgaatcgc cggtcgaaat ggcgaaccgc
     3061 acgccggcgg cctgcaactt cgatgcgttc tcatagaggg aatcgtatcc atcgtcttcg
     3121 cgcagcggca tgttcaaaac gctgtcaaga atcaccggca cgtccttctg ttttaagaac
     3181 gacgcaatct tccagccctc gctcgcaccg aggatgatgg gtttt
//
LOCUS       DATDBY010000536         2193 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2909460, whole genome shotgun sequence.
ACCESSION   DATDBY010000536 DATDBY010000000
VERSION     DATDBY010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2909460"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VIT19_09980"
     CDS             complement(<1..265)
                     /locus_tag="VIT19_09980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839353.1"
                     /translation="MDKLGPAKKSHSGRLAEINRAITTSLQFDQVLDIIVESALQLVE
                     ARACVLLLVEKDGNFRVRAARGTTPEFAAEFSASMDEDAVRKLH"
     gene            complement(276..1652)
                     /locus_tag="VIT19_09985"
     CDS             complement(276..1652)
                     /locus_tag="VIT19_09985"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HEY5839354.1"
                     /translation="MTEKIKTGCAGLDEVLYGGIPTNTISVIMGAPGTGKTILAEQIA
                     FCNATVDAPVLYLTTMSEPLEKFIVHGQHYSFFDQDKIGHSVFYEDLGLMLREQNVQR
                     LPEIVTDLLAARRARFVFIDSFKALNELMEEPQRRNLIFDLATVLSTYDCTSFLIGEY
                     AEAMMTELPEFAIADVVIQMLKLATNVREERFLRVEKLRASKSIPGLHAFSITSDGLE
                     VFPRVLTPPVVPNYTAKPERVNTGIQGLDEMIAEGFWRGTTTLVAGPPGSGKTIMALE
                     FLRSGVTKGEPGIYLGFQENPTQLTRVMRNMGMPVEKLINDGFEIMYQSPVEMQLDRI
                     AAKLFERIRSGKVKRVVIDALGDLERISIDRQRFSDVIYALTQWFAVENVTCFMTYEL
                     ANLFEVHGISDQQISNMSDNLLLLRFQPGPELKRTLRIIKTRGSAHDGHEHEIHITNE
                     GLVIEGIR"
     gene            complement(1656..2069)
                     /locus_tag="VIT19_09990"
     CDS             complement(1656..2069)
                     /locus_tag="VIT19_09990"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5839355.1"
                     /translation="MMNTLADRNALILVVERNPLVQRLEKFFLEQAGYGVEFAADGLT
                     ALGRARELRPTILVTEVLVPKLDGLSLCRQLKSEPATQDTKVLIFSHLHAEQRAREAG
                     ADAFLIKPLNEERLIEMVTKLIEEMDHQAAAGEQN"
BASE COUNT          479 a          608 c          583 g          523 t
ORIGIN      
        1 cgtggagctt gcgcaccgcg tcttcatcca tcgaagcgga aaactctgcg gcaaactccg
       61 gcgtggttcc gcgcgcggcc cgcacgcgaa agttcccatc tttctcgacc agcagaagga
      121 cgcaggctct ggcctcgacc agctgcaagg cactttcgac gatgatgtcg aggacctgat
      181 caaattgaag cgaggtagtt atcgcccggt tgatttcggc cagtcgcccg gaatgagatt
      241 tttttgccgg ccccagctta tccatgatct ccttgctacc gaatcccctc gatcaccaaa
      301 ccttcattgg taatgtgaat ctcgtgttca tgaccgtcgt gtgcgctgcc gcgagtctta
      361 ataattcgca gcgtccgttt cagttcgggg cccggttgaa atctcagcag gaggaggttg
      421 tcactcatgt tcgaaatctg ttggtcgctg ataccgtgga cttcgaagag attagcgagt
      481 tcgtaagtca tgaaacaggt tacgttttcg acggcgaacc attgagtcag cgcataaatc
      541 acatctgaga atctctgccg atcgatgctg atgcgctcaa ggtcgccgag ggcatcaatc
      601 accacccgct tcactttgcc gctgcgaatc cgctcaaaga gtttcgcagc gatgcgatcc
      661 aactgcatct cgaccggcga ctggtacatt atttcaaagc cgtcgttaat gagtttctca
      721 accggcattc ccatgtttcg cattactcgg gtgagttggg tggggttttc ctgaaagccg
      781 agataaattc ccggctcgcc tttggtcacg ccggaacgga gaaactccag cgccatgatc
      841 gtctttcccg atcccggcgg accggccacc aaagtggtgg tgccgcgcca gaagccctcg
      901 gcaatcattt cgtccaaacc ctgaatgccg gtgttgacgc gctcaggctt cgcggtgtaa
      961 ttcggcacca ccggcggcgt gagtacccgc ggaaagactt ccagaccgtc ggacgtgatg
     1021 gaaaacgcgt gcaaaccagg aattgatttc gaagcccgca acttttcaac gcgcagaaat
     1081 ctttcctcgc gcacattcgt cgccagcttg agcatttgga tcacgacatc ggcgatcgca
     1141 aactccggga gttcggtcat catcgcctcg gcgtactcgc caatcaaaaa actggtgcaa
     1201 tcataggtcg agaggaccgt agctagatcg aatatgaggt tgcgccgctg cggttcctcc
     1261 atcagctcgt tgagtgcttt gaacgaatcg ataaagacaa atcttgcgcg acgcgcggcg
     1321 agcaggtcgg tgacgatctc aggcaacctc tggacgtttt gctcgcgcaa catcaggccc
     1381 aggtcttcgt agaaaaccga atggccgatc ttgtcctgat cgaagaagct atagtgttgt
     1441 ccgtgcacga tgaatttttc cagcggttcg gacatcgtgg tcagatacag tacgggcgca
     1501 tcaaccgtcg cgttgcaaaa ggcaatctgc tccgccagga tggtttttcc ggtgcccgga
     1561 gctcccataa tgacgctgat agtatttgtc ggaatgccgc cgtacagcac ttcatccaaa
     1621 ccggcgcatc ctgtttttat cttttccgtc attaattaat tctgctctcc ggccgcggcc
     1681 tgatggtcca tttcttcgat tagcttcgta accatttcga ttagacgttc ttcatttaac
     1741 ggtttgatca gaaacgcgtc cgcgcctgct tcgcgagccc gttgttcagc gtgcaggtgg
     1801 ctgaagatca gcaccttggt gtcctgtgtt gccggctcgg acttgagctg gcgacaaagg
     1861 cttaagccat cgagcttcgg caccagcacc tcggtaacca ggatggtcgg gcgtagctcg
     1921 cgtgcgcgcc ccaacgctgt aaggccatcg gcggcaaact caacgccgta acctgcctgt
     1981 tcgagaaaaa atttttcgag tcgctgaacg agtgggttcc gctcaactac cagaatcagc
     2041 gcattcctgt ccgcaagtgt attcatcatc gagtctggaa agacacgaac gctctactaa
     2101 aaggggaacc gagaattggc tgttggggaa gtgctgctgg gttttatagc aaaccgcgca
     2161 ccgtgataca aggtgcttga aattcttgag atg
//
LOCUS       DATDBY010000537         7716 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_450903, whole genome shotgun sequence.
ACCESSION   DATDBY010000537 DATDBY010000000
VERSION     DATDBY010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 7716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7716
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_450903"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1862)
                     /locus_tag="VIT19_09995"
     CDS             complement(<1..1862)
                     /locus_tag="VIT19_09995"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5839356.1"
                     /translation="MRDFTGETPVTPQEQMLLKGKLFVCAVILLLFAHILVAQQDRQP
                     KTDDVLRISTELVQTGVSVFDKQGRFVEGLAKEDFELQVDRRPVPISFFESIVAGSAR
                     DRSARRITQNDPVTEDRAAAPSVRRRTIVFFVDDRHLSLDGVGRTRKTILNFINKQMG
                     PNDLVAIASASGHIGFLQQFTDNKEVLRAAVGRISHLPYSVTDYGKNPGSPMTEYMAL
                     TIERRDDPAVFEFYVNDCIKWTLKAPGMARRSPRTQCEVEVKNRARQILFQAGAVTSS
                     SYYSLEMLLQSAQRMPGSKLAFFISDGFLADTGPRGGVGRDRLGRITDNARRAGVVIY
                     TIDARGLISGALDATGNVPFDGGGALDSASMREIAATQDALNALAVDTGGRALRNQNV
                     FDQFIDSALDETSRYYLIAWRPDADDEKDAKLRKITVSVIGRPDLTVRSARGFTNRSA
                     VASGADKGESEAENGKSARAKQPDADIQDALKDFYPKQALPVQLSLIYLDAPASGSVL
                     TTSVQAPADSLSYGDEGKDSARLTIAGVVLNDQGKPAASFRTALKVNPASASKSQGNA
                     SNVIYNYPAPLKPGIYQVRVAARDDQSGLIGSAMQWIAIPDLASRQLSMSSLLVG"
     gene            complement(1899..2495)
                     /locus_tag="VIT19_10000"
     CDS             complement(1899..2495)
                     /locus_tag="VIT19_10000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839357.1"
                     /translation="MAEPTTTISDVFELPKPGEPDPKTDRWEAVQKRIKEEVKDVKFP
                     AALSDLGPKICELFNVPLPNVLVTSWKKVDDLRARLEKSRNAPDKVEYLELAQHTINC
                     DQKPYLEMRFKDVPVKKIQFAVKLVFTLKGFVLKIQGGAIQEIQTGACEVKGTISYGG
                     QVIVDKKLSPIKLPGTLSVPAVIGAFQPPAEQAKAAAT"
     gene            complement(2507..3925)
                     /locus_tag="VIT19_10005"
     CDS             complement(2507..3925)
                     /locus_tag="VIT19_10005"
                     /inference="COORDINATES: protein motif:HMM:NF012999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HEY5839358.1"
                     /translation="MRRQARFLLPLLCLVVLCEAVGSQQQPPTVNLRPSSVVSPPGTP
                     QVRVRADKQRVPRGTKVTFTLSPASVVTDYAVTLYFGDRQREVMTGPQATHVYQAVGT
                     YTYSVDVKPRQRCQPRVTLSASASSVPEGEAITFSAQLSGNCPNIQYRFVFGDGSSSN
                     WQSSGGAQHSYAPAGKYLAYVDISDGSSRIGGSPRKRIDVTRREPVVDPRNNVSVSLT
                     AEPLSARPGKPVTFTAKATPARAGTRYLFNFGDRRQTSWQTDPRSTHTYTTRGTYRPY
                     VQVSQLLNNKAVSATSAPAMLTVGRGPGPTPDPDPRPTPTPGPGTSPSPTPFASPTPS
                     PGNGSSSPGDGSPSPGSSPSGSNGTTVTGSEASSSSPSVTSTSNDGAPSNKWWYLLIA
                     AVLLFLIYQASALLFATQPTFAPFADQGVAAVAHKKGAVPIDFELVLDRNVSGGDYSV
                     TTDQARLITNSPKAEDRQIIEI"
     gene            complement(5036..5326)
                     /locus_tag="VIT19_10010"
     CDS             complement(5036..5326)
                     /locus_tag="VIT19_10010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839359.1"
                     /translation="MITKKSIATVVSVMIIIVSAVFIFNLKHEVPKPPEWPANVRIYR
                     TSITGETSVFDGNSGRYLFSYDPEYDPNVRPVKIEQLDGKRWQVIFEDPIAK"
     gene            5467..7122
                     /locus_tag="VIT19_10015"
     CDS             5467..7122
                     /locus_tag="VIT19_10015"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5839360.1"
                     /translation="MASEGSRTAQAAFGTRLWWLIAGRAAVTVLVMLAGGIWARGTFG
                     PNAGDSLQSIKPLLLVVALLTVIHCVAHLLWNNYLVQARFQFFADVLLVTWLVWITGA
                     VRSPYTALYIVVISVASLFIGPRGALITAIGSAAAFNAVSLLLLNGMVPRGGLVTEES
                     LPTVIQSMGLADVSFLVVGLLAAKLAERQLTSDVQLAEATRTLADLRLVHERIVESIR
                     SGLITTDLECRIFTFNAAAEEITGYEADDVRGKNASMFFGEMTRQMADSMTAAAEGKV
                     SPRYEIDSLTQSGFMLHLGYSIAPLFAESGETSGLVITFQDLTDVRVMEETARRQDRL
                     AAVGRMAASIAHEIRNPLAAMRGSIQMLRSEMDNDSDQSQLMEIILRESDRLNKIVTD
                     YLNYARPRAAEMQEVDVRALIGETLRLLRNSPEITDGHSLKEELPGEPLMVKGDAEQL
                     KQVCWNVTRNALRAMPDGGEFRVTAQRTDADRVHITFTDTGCGMTPEQVERLFEPFTS
                     TTGGTGLGLSIVYQIIRDHSGTINVRSREGSGTTITVELPGVG"
BASE COUNT         1690 a         2108 c         2170 g         1748 t
ORIGIN      
        1 ccgacgagca gactgctcat ggaaagctgg cgcgacgcga ggtcgggaat cgctatccat
       61 tgcatagcgc tgccgatcaa cccgctctga tcgtcccggg cggctacgcg gacctgataa
      121 atgcctggct ttaagggcgc aggatagttg tagataacgt tcgaagcatt tccctgcgac
      181 tttgaagcgg aagccggatt aacttttagt gccgtgcgga aactcgcggc tggtttgccc
      241 tgatcgttga gaaccacacc cgcgatcgtc aaacgcgcgg aatctttacc ttcatcgcca
      301 tacgaaagag aatccgccgg cgcctgaacg gacgtggtca gcacactgcc gctggccggc
      361 gcgtccaaat agatcaaaga aagctgcaca ggaagagcct gcttcggata aaagtccttg
      421 agtgcgtcct gaatgtcggc gtcgggttgt ttcgctcgcg cactcttgcc gttttctgct
      481 tccgactctc ccttgtccgc cccggaagcg acggcgcttc tgttcgtgaa tccacgcgcg
      541 gaacgaaccg ttaagtctgg acgcccgata acgcttaccg tgatctttct gagcttggcg
      601 tccttttcat catcagcgtc tggacgccag gcgatcaggt aataccgcga cgtctcgtcc
      661 agggcactgt cgatgaactg atcaaacaca ttctgatttc gcagcgcgcg gccgccggta
      721 tcgactgcca gggcattcaa cgcgtcctgc gtcgcggcga tttcgcgcat acttgcactg
      781 tcaagcgccc cgccgccatc aaacggcaca ttaccggttg catccaatgc gcctgaaatc
      841 agaccgcgcg cgtcgatcgt atagatcacc acgccggcac gacgggcgtt gtcagtaatg
      901 cgtccgagcc gatcgcggcc gaccccaccg cgtgggcctg tatcggccaa aaacccatcg
      961 gaaataaaga aagcgagctt gctgcccggc attctttgcg cagattgaag aagcatctcc
     1021 agcgagtagt agctgctcga ggtgacggcg cccgcctgaa acagaatctg ccgcgcgcgg
     1081 tttttgacct cgacttcgca ctgggtgcgc gggcttcgcc tggccatacc gggtgccttg
     1141 agcgtccact ttatgcagtc attaacataa aactcaaaca ccgccggatc gtctcgccgc
     1201 tcgatggtaa gcgccatgta ttccgtcatc ggactacctg gattcttccc ataatcggtc
     1261 accgaatacg gcaagtgact gatgcgcccg accgctgcgc gcaagacttc tttgttgtct
     1321 gtgaactgct gcaggaatcc gatgtgacca ctggcggaag cgatcgccac cagatcgttc
     1381 gggcccattt gtttgttaat gaagttaagg atggtttttc gtgtgcggcc gacgccgtcc
     1441 agcgaaagat gacgatcatc aacgaaaaag acgatcgttc ggcgccgcac agacggagcg
     1501 gccgcgcgat cttcagtcac cggatcgttt tgagttatgc gccgggctga ccgatcacgc
     1561 gcgctccccg cgacaatgct ttcgaagaac gagatcggca ccgggcgacg gtcaacctgc
     1621 aactcgaagt cttccttcgc cagtccttcc acgaagcgac cttgcttatc aaagacactg
     1681 acacccgtct gcacaagctc agtgctgatg cgcaaaacat catctgtctt aggctggcga
     1741 tcctgttgag caaccaggat gtgcgcaaag agcagcagaa tcaccgcgca gacaaagagt
     1801 ttgcccttga gtagcatttg ttcctgaggg gtgacgggcg tctcgcccgt gaaatcacgc
     1861 acaagatgcg cgtgccactt cgacgttatt cctttggatt aagttgccgc ggctttggcc
     1921 tgctcagccg gtggttggaa ggcaccgatg accgccggca ccgacagcgt gcccggcagt
     1981 ttgattggcg agagtttctt atcgacgatc acctgacccc catacgagat ggtgcccttc
     2041 acttcgcagg ccccggtttg aatttcctga attgctccgc cctgaatctt cagcacaaag
     2101 cccttcaggg taaaaacgag tttcaccgcg aactgaattt tcttaaccgg cacgtccttg
     2161 aaccgcattt ccaggtaggg cttctggtca caattgatcg tgtgctgcgc caactcgaga
     2221 tattccactt tgtcgggcgc gttgcgggat ttttcgagcc gcgcacgcag gtcatcgacc
     2281 ttcttccacg acgtgacgag gacgttcgga agcggcacgt taaacagctc gcagattttc
     2341 ggcccgaggt cactgagcgc cgccgggaac tttacgtcct tcacttcctc tttgattcgc
     2401 ttctgaacgg cttcccaccg atccgttttc ggatcgggct cgccgggttt cggaagttcg
     2461 aaaacgtcgc tgatggtggt cgtgggttca gccattactt ctccctttaa atttcgatta
     2521 tctgccggtc ttcagcttta ggcgaattcg taatcaggcg cgcctggtcc gttgtaacgg
     2581 aatagtcgcc gcctgagaca tttctgtcga gcaccagctc aaaatcgatc ggcacggcgc
     2641 ctttcttgtg cgcgaccgcc gcaactccct ggtctgcgaa cggggcgaag gttggttgcg
     2701 tggcaaacag gagtgccgac gcctggtaaa tcaagaacag gaggacggcc gcaatcagca
     2761 gataccacca cttgttgctt ggagctccgt cattggaagt tgaggtgacg gaaggtgacg
     2821 atgaagatgc ttcgcttccc gtgactgttg ttccattgga gccggacggt gacgaaccgg
     2881 gcgacggtga tccgtcacct ggcgaagatg atccgttacc aggcgaaggt gtcggcgaag
     2941 caaagggcgt cggtgatgga cttgtgccgg gcccgggcgt cggcgtggga cgaggatccg
     3001 ggtccggggt cgggccaggc ccacgtccta ctgtcagcat cgccggtgca cttgtcgcgc
     3061 tcactgcttt gttgttgagc aactgactga cctgcacgta agggcgatag gtcccccgcg
     3121 ttgtgtaagt gtgtgttgac cgcggatccg tttgccagga cgtttgccgc ctatcgccaa
     3181 aattgaacag gtaacgcgtg ccggctcgtg ccggtgtcgc cttcgctgta aaagtaaccg
     3241 gttttcctgg ccgcgccgac aacggttcgg ccgtcagtga aaccgatacg ttgttgcgcg
     3301 ggtcaaccac tggttcccga cgcgtcacat caatccgttt acgcgggctg ccgccgatgc
     3361 gactgctgcc gtcactgata tcaacgtatg cgagatactt tccggctggc gcgtagctgt
     3421 gttgcgcacc cccgctactt tgccaattgc tcgacgaccc gtcgccgaac acaaagcgat
     3481 actgaatgtt gggacaattt cccgagagct gggctgaaaa tgtgatcgcc tctccctctg
     3541 gaactgaact cgctgaggcg ctcaaggtga cgcgcggctg acaccgctga cgaggtttga
     3601 cgtctactga gtaagtgtag gttccgacgg cctggtaaac gtgagtggcc tgagggccag
     3661 tcattacctc tcgctgacgg tcaccgaagt aaagcgtcac agcgtaatca gtgacgacac
     3721 tggcgggtga gagagtgaag gtcactttgg tgccccgcgg cacgcgctgt ttgtcagccc
     3781 ttacacgaac ctgcggagtg cctggcggtg aaacgacgga actcgggcgc agatttactg
     3841 ttggaggttg ttgttgagag ccaacggctt cacacaacac gaccagacag agaaggggca
     3901 agagaaaccg agcctgacga cgcatgatcg agaccgaggg ttgtagtggg cactcttacg
     3961 cttgcggcaa cgtcgcgaag ataagcccgt gggacgggaa agtcaacgct gaggcgagtg
     4021 atggcgctgc taaaagaaac tgcatccccg gaggcttctt ctttaaccaa gccatcgctg
     4081 aaagttctat tgttggctcg tcatcttgga tgattggtgc ggcgtccaaa tcgcgagtgt
     4141 ttgcggcggg tcaatcgcgc tagcgcaaga gccagtggcc tagtctgaac aagccgtaag
     4201 ttactactgc aaacaacaag accatggtta cacccgttgc gattcgcagg agtgagaaac
     4261 ccgactcttc aacactcaat ttggaccgcc cggaaaagat cttgctcgac aaccattctc
     4321 caaaaaagca gtaaggaacc accaataagc cgaaaacaag ccaattatca gtcaaaatcc
     4381 aaagtacaag agttgccgta agaaaaccca gacagcccaa tgcttttttt gggccgctta
     4441 agggtgcgcc attgacctcg gtcatagagt tcccctcatg actgtcatcg cgttgtcttt
     4501 ttcagtattc acgcgggcac cacgcagcat tgatataaag agcgccaatc gcgattccgg
     4561 tttcgtatgg cacgcctaca gcttcggcca tgcggtgtac gcggtataga ggctctgatc
     4621 tcattttcgg agggctagta caaggtaggt tagtcctgcc cctacgggaa tgataatgac
     4681 tgatgcgaga agcacaagaa acacagcaat gccagccgtt gatgaggttg gccggtgcaa
     4741 agcatcatag cgtacgacca aatcaattat cagatacaac agcagaccac cactgagtga
     4801 cagtctaagt ttgctgctta gtttcctttc gatcgacgcg aagaaagtta aaacgtaggg
     4861 aatccagccc ataagtgtcg caggaagcat ttcaagaacg gattctttag ggactgatgt
     4921 gagggtaacc actgaacaca gcaaaatgcc gagggccgaa attagaaggg tcgtcttgtt
     4981 tttgtgcaat tgtacttgtc tccgctttgg cgagttcgat tgaccatcct caaagttatt
     5041 tcgcgattgg atcttcaaat atgacctgcc agcgtttccc gtccaactgt tcgatcttca
     5101 cgggcctaac gttcggatcg tattctggat cataagagaa taggtatctc ccactattcc
     5161 cgtcgaacac actcgtctca ccggttatcg aggttcgata aattcgcacg ttcgccggcc
     5221 actcgggtgg tttcggtacc tcatgcttaa gattgaagat gaaaacagcg ctcacaataa
     5281 taatcatgac gctgacgacc gtcgctatgg actttttggt tatcattggc gttgactaca
     5341 aagctctttg caggctcttg agagacctcg cagcttatta agtcgatttg cttgagtcaa
     5401 taatttgtta agccgacgta gtgtcttctt gagttagtac gcggaaatcc atggtacgct
     5461 ttcggcatgg cgagtgaagg cagccgtacg gcgcaagcag cattcggcac tcgtctgtgg
     5521 tggttgattg ccggacgggc ggcggtgact gtgctcgtca tgctggccgg cggaatctgg
     5581 gcgcgcggca cgtttggacc gaacgccggc gactcactgc aatcaatcaa gccgctcctc
     5641 ctggtagtcg cgttactcac cgtcatccat tgcgttgcgc acctcctctg gaacaattat
     5701 ctcgtccagg cgcgcttcca attctttgcg gacgtgctct tagtcacgtg gctggtttgg
     5761 attaccggcg ccgtccgctc gccttacacc gctctttaca tcgttgtgat ttcggtcgcg
     5821 agcctgttca tcggcccgcg tggcgcgctg attaccgcga ttggcagcgc ggcggcattc
     5881 aatgcggtgt cattgcttct gctgaatgga atggtgccgc gcggtggcct ggtgacggaa
     5941 gagtcgctgc ccacagtcat tcagtcgatg ggtctggccg acgtttcgtt tctcgtggtc
     6001 ggactgttgg cggcgaagct cgccgagaga cagttaactt cagatgtgca actggcagag
     6061 gcgacgcgca ccttagcgga cctgcgcctg gtccacgaac gcatcgtcga atcgatccga
     6121 tcgggtttga ttactacgga tcttgagtgc cgcatcttta cgttcaacgc ggccgcggaa
     6181 gaaatcaccg gctatgaagc cgacgacgtt cgcggcaaga acgcttcgat gttttttggc
     6241 gagatgaccc ggcagatggc cgactcgatg accgcggcgg cggaagggaa agtcagcccg
     6301 cgatacgaga tcgattcact cacgcagagt ggtttcatgt tgcatctcgg ctacagcatc
     6361 gcgcctttgt tcgcggaatc gggcgagaca agcggactcg tgatcacttt tcaggatctt
     6421 accgacgtgc gcgtgatgga agagactgcg cgacgtcagg atcgtttggc ggcggttggc
     6481 cggatggctg cctcgatcgc gcatgagatt cgcaatccac tggcggcgat gcgcggctcg
     6541 attcagatgc tcaggtctga gatggacaat gattccgatc agtcccagct gatggaaatc
     6601 atcctgcgcg aatctgatcg tcttaataag atcgtcactg attatctcaa ctacgccagg
     6661 ccgcgtgcgg ccgagatgca agaggtggat gtgcgcgcat tgatcggtga gaccctccga
     6721 ctcctgcgca atagtcccga gatcacggac ggccacagtc taaaagagga gttgccaggc
     6781 gagcctttga tggtgaaagg cgacgcggaa cagttgaagc aggtctgttg gaacgtcacg
     6841 cgcaacgctt tgcgggcgat gcctgacggc ggtgaatttc gcgtcacggc ccaacgcacc
     6901 gatgccgatc gcgtccacat caccttcaca gacacgggtt gcggcatgac gcccgagcaa
     6961 gtggaacgct tattcgaacc gttcacttcg acgaccggcg gcaccggtct cgggctgtcg
     7021 attgtctatc aaattatccg cgaccatagt ggtacaatca acgttcgcag ccgagagggc
     7081 tctgggacca ctattacggt ggagttgccg ggcgttgggt aacttatttg acatctgaga
     7141 tttggcattt ggcatttgat atttgttgta accgcgcggt ttgaattggg atgaaggaag
     7201 caacggcaat cgcgaaggaa cataggtcgc aagccgatga gttagaggat cggctagtcg
     7261 attttgctgt tcggagagtg agattgtcgg ctgcacttcc gcggactccg gcgggaagac
     7321 atagcggagg gcaaatcctt cgttccggaa cctcacctgc gccaaactat gcggaggcga
     7381 gaggcgcgga aagcactccg gatttcattc acaagatccg gatcgttttt aaggaactaa
     7441 acgaaactct tatctggttg cgcgtgatac accgtagcca gctactaaag tacgagctaa
     7501 tcagcgacat cctcaacgag aaccttgaac tttgcaaaat cttcgcgact accttaaagg
     7561 ccgcgaagca aaatcagaga gaacgcaaat gttaaaatgc caaatctcaa atgccaaatg
     7621 tcaaatagta ttctgatcct atggccaatc ttctaatcgt cgacgatgaa ctaagcatgc
     7681 gccagttcct gacgcatctt ttccagcgcg agggtc
//
LOCUS       DATDBY010000538         3001 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_10772, whole genome shotgun sequence.
ACCESSION   DATDBY010000538 DATDBY010000000
VERSION     DATDBY010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3001
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10772"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..136)
                     /locus_tag="VIT19_10020"
     tRNA            complement(60..136)
                     /locus_tag="VIT19_10020"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(100..102),aa:Asp,seq:gtc)
     gene            complement(177..251)
                     /locus_tag="VIT19_10025"
     tRNA            complement(177..251)
                     /locus_tag="VIT19_10025"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(217..219),aa:Val,seq:tac)
     gene            427..1650
                     /locus_tag="VIT19_10030"
     CDS             427..1650
                     /locus_tag="VIT19_10030"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5839361.1"
                     /translation="MRFVIPSFIVGLWLSLVFAATAANQEPQPNQQQRPRTVGQGNSQ
                     SNSKGNSNSSQPTNTPVEEVDEGDIVRVETQLVSVPAVVTDRNGRPLAGLKLENFAVL
                     EDGKTQTLTNFATTETPFEIALLLDTSGSTREDLGLIRDAANAFIAALRPGDRVAIVA
                     FKNRQDDGIPMATVDLRSSLTDDRGNLRVAIESLGTSNGTPFYDSLAEISKQIFREQP
                     RAEVRGRRAIVALTDGVDSSSNIGFEDARATLARTGVAAYFIQLSTEDYVEDRLLKDC
                     EDDGRLSLSSKQLERFRRLFVPGAQKEDYQDFCRLGQFERMDISRRLYNLARTEMNEL
                     ARGTGGRNFSAATLRDARAAFAQVANEIGTQYSLGYYPSNKTRDGQFRKISVEVRGVK
                     DAQVRAREGYYAPKK"
     gene            1752..1964
                     /locus_tag="VIT19_10035"
     CDS             1752..1964
                     /locus_tag="VIT19_10035"
                     /inference="COORDINATES: protein motif:HMM:NF016167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HEY5839362.1"
                     /translation="MNRDLIVNSDPEILGGTPVFSGTRVPIRSLFDHLEAGDSIDDFL
                     EGFPSVRRDQVIALLEMSQERVLQPA"
     gene            1967..2284
                     /locus_tag="VIT19_10040"
     CDS             1967..2284
                     /locus_tag="VIT19_10040"
                     /inference="COORDINATES: protein motif:HMM:NF037832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5615 family PIN-like protein"
                     /protein_id="HEY5839363.1"
                     /translation="MRILLDENLDWRLERDLAGHDVSSVPRIGWAGIKNGELLHRAEQ
                     QFDVLITLDSGLGHVQNIAGRNLVLILLRARSNRLADTRPLMPAVGAALEKAQSGTLI
                     SVP"
     gene            2284..>3001
                     /locus_tag="VIT19_10045"
     CDS             2284..>3001
                     /locus_tag="VIT19_10045"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF003766.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008973 - phosphopentomutase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA];
                     GO_process: GO:0043094 - cellular metabolic compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HEY5839364.1"
                     /translation="MINEQPIFNRITLIVLDGAGIGAMPDAPEWGDAGSDTFGHICES
                     RQLKLPNLQSLGLGNIRPLNGVAKIEKPRGSYGKCALKSNGKDTTTGHWEMAGIILEH
                     AFPTYPNGFPQTLIDEFVAKTNVPGVLGNFPASGTEIIKDLGAEHVNTGKPIVYTSGD
                     SVFQIAAHEEIIPLDRLYEICETARDMLRGEHEVGRVIARPFLGKPGEFFRTENRHDY
                     AVPPPRENLLPLLSEHGLDVV"
BASE COUNT          684 a          838 c          841 g          638 t
ORIGIN      
        1 agggcatcta aacgaaaaag cggctgccct tcaaaattga aaagcaaccg cttctagaat
       61 ggcggagccg acgggactcg aacccgcgac ctccgacgtg acaggccggc gttctaacca
      121 actgaactac gactccgcat tttcaaatct caggtttgag atttgagatc tcataatggt
      181 gggcgcggag ggactcgaac ccccaacctc ttccttgtaa gggaagccgt ctaccattga
      241 catacgtgcc cattttcaaa aatcagttcg aaatgactgc gtcacgacga actgccatcg
      301 taaggaaaag caacgaagag gtcaagacgt gttcggccag aacgatcccc gctacagccc
      361 ttttcccgcc acgtttttgc ggctatagtt gcctcacccc agcactactc tctaccggct
      421 caggaaatgc gattcgtcat ccccagcttt atcgtcggct tgtggctgtc tctggttttt
      481 gcggcgaccg ccgctaacca ggagccgcag ccaaaccagc agcagcgtcc gcgcaccgtc
      541 ggccaaggaa actcccaaag taactcaaaa ggcaattcca acagttcgca acccacgaac
      601 acccccgtcg aggaagttga cgaaggcgat atcgtccgcg tcgagacgca gctcgtctct
      661 gtgcccgcgg tagtgacgga tagaaatgga cggccgctcg ccggattgaa actcgaaaac
      721 ttcgcggttt tggaagacgg caagacgcag actctgacaa acttcgccac gacagaaacg
      781 cctttcgaga tcgccttgct gctcgacact tcgggttcga cgcgtgaaga cctgggattg
      841 attcgcgatg ccgcgaacgc tttcattgcc gcgttgcgtc cgggcgatcg cgtcgcgatc
      901 gtcgcgttca agaatcgcca ggacgatgga ataccgatgg ccacggtcga tttgcgatcg
      961 agcctgacgg acgatcgcgg gaatttgcgc gttgcgattg aaagtctcgg cacgagtaac
     1021 ggcacgccgt tctacgattc gctggcagag attagcaagc agatttttcg cgaacagcct
     1081 cgagccgaag ttcgcggccg ccgcgcgatc gtcgcgctaa ctgacggtgt tgactcaagc
     1141 agcaacatcg gctttgagga tgcgcgggcg actctggcgc ggactggtgt cgcggcgtat
     1201 tttattcagc tcagcactga ggactacgtc gaagatcggc tgctgaaaga ctgcgaggat
     1261 gacggccgtc tgtcgctctc gtcaaagcaa ctggaacgct ttcgccgcct tttcgtgccc
     1321 ggcgcgcaga aagaagacta ccaggacttc tgccggctgg gtcagttcga acggatggac
     1381 atcagtcgac ggctctacaa tctggcgcgc acagagatga atgagcttgc gcgcggaact
     1441 ggcgggcgaa atttttccgc ggctacgtta cgtgacgcgc gcgcggcgtt cgcgcaagtt
     1501 gctaacgaga tcggcacgca atacagcctc ggctactatc cttctaacaa gactcgcgat
     1561 gggcagtttc gaaaaattag cgtcgaggtt cgcggcgtga aggatgcaca ggtgcgcgcc
     1621 cgcgaaggat attacgcccc gaagaagtga gcaggctggg agcgcgggca tcctgcccgc
     1681 atctgccgcc gcatgaatgc ggtgagcgag tgttgcttga agcgcaatgc tcacaaagct
     1741 acactgtcgt catgaatcga gacctaatcg tcaattctga tcctgagatt ctcgggggta
     1801 cgccggtatt ttccggtacg cgggtaccaa ttcgcagctt gttcgatcat ttggaagccg
     1861 gggattcaat tgacgatttt cttgaaggat ttcccagcgt ccgccgcgat caagtcatag
     1921 ctcttttaga aatgtcgcaa gaacgggttc ttcagcccgc ctgaccttga gaatcctcct
     1981 cgatgaaaac cttgattggc gtttagaacg cgatcttgct ggtcacgacg tctcatccgt
     2041 tccaagaatc ggctgggcgg gaataaagaa tggtgagttg cttcaccgcg ctgagcagca
     2101 attcgatgta ttgatcacac tggattctgg cttaggtcac gttcagaaca tcgcagggcg
     2161 taatcttgtt ctgatacttc ttcgggcgcg ttcaaatcgt cttgctgata cgaggccgtt
     2221 aatgcccgcc gtgggcgcgg cgcttgaaaa ggctcaatca ggcacgttaa tttcagttcc
     2281 ttgatgatca acgaacagcc catcttcaat cgcataactc ttatcgtcct tgacggcgcc
     2341 ggcattggcg cgatgccgga tgcgccggag tggggcgatg ccggctcaga cacgttcgga
     2401 cacatttgcg aatcgcgtca gttgaagttg cctaacctgc aaagcctcgg gctgggcaac
     2461 attcgcccgc tcaacggcgt ggcgaaaatc gaaaaacccc ggggtagtta cggcaagtgc
     2521 gcgctgaagt cgaacggcaa ggacaccacg accggacatt gggagatggc cggcattatt
     2581 ctcgagcacg cctttccaac ctatccgaac ggttttccgc aaacgttgat tgatgagttc
     2641 gtcgcgaaaa cgaatgtgcc gggagtcctc ggcaactttc cggcgagtgg cactgagatc
     2701 atcaaagacc tcggcgcaga acacgtcaac acgggcaagc caattgttta cacttcaggc
     2761 gattccgttt ttcaaatcgc cgcgcacgaa gagatcatac cgctcgatcg tctttacgaa
     2821 atttgcgaga ccgcgcgtga catgctgcgc ggcgaacacg aagttggacg ggtaatcgcg
     2881 cggccttttc tcggcaaacc cggagagttc tttcgcactg agaaccggca cgactatgcg
     2941 gtgccgccac cgcgggaaaa tcttctaccg ctgttgagcg aacacggtct ggacgtagtc
     3001 a
//
LOCUS       DATDBY010000539         5119 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1493101, whole genome shotgun sequence.
ACCESSION   DATDBY010000539 DATDBY010000000
VERSION     DATDBY010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5119
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1493101"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1232)
                     /locus_tag="VIT19_10050"
     CDS             complement(<1..1232)
                     /locus_tag="VIT19_10050"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEY5839365.1"
                     /translation="MLETLKIAAVFFLVLANGFFVASEFALVGVRRSRIATMAAAGDG
                     RAKTLLGLVDNLNAYISATQLGITLASLALGWIGEPAIAHLLEIPLRGRVSETLLHTI
                     AFTVAFSIITFLHIVLGELAPKTIALERAEKTALAIARPMLLFYKTFSYPIRLLDWAG
                     TRTVRLLGLHPTSEHASIYTADELRQLIDVSRRKGHIEVEERLVNSIFEFSDAEVREA
                     MIPRTEVQGIPQTATLDEVKQVFRASGYSRLPVYRERLDDVVGTISRRDLEPYLETPP
                     AEGFDLRQLVRSAQFIPATARLGAALTRMQATRAHLAVVVDEHGGMEGIVTMEDLLEE
                     IVGEINDEFDEEVRSQISKEPDGSYVLSGMLTVRDANRRLKLDLPEDSGYTTLAGFLM
                     AQAGRLLQPNETVTYQDFV"
     gene            complement(1393..1469)
                     /locus_tag="VIT19_10055"
     tRNA            complement(1393..1469)
                     /locus_tag="VIT19_10055"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1433..1435),aa:Arg,seq:acg)
     gene            complement(1673..2707)
                     /locus_tag="VIT19_10060"
     CDS             complement(1673..2707)
                     /locus_tag="VIT19_10060"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5839366.1"
                     /translation="MFVFPGSYLIKASARFGLAALFCASFFLSFSTAVSAQDEILKTD
                     TSLVQLNVGVVDRQGRAITSLAQGDFAIYEDDVKRPIVAFEPTQSPFSLVMLLDMSGS
                     TVNFRQQIQQAAIRFLDALAPEDRVAVIVFNGKGVRELAGFTTDRQKTAYAITLASGS
                     GDSPVYDALKYSLKQLATEGKRRKAIVALTDGLDTQVRKSDRAAVAKATDLEVSTVIK
                     PEATSDLNSVLVDADRQGVTIFPLALPSGDPRRLPLPDPRIIAQYSAARTRLQILADR
                     TGGQVSDIRRLDQMARTYAELAAHLRTLYSIAYQPPNPQTRDGKWRAIRVDVTRPDLI
                     AKTKTGYYAK"
     gene            2963..3439
                     /locus_tag="VIT19_10065"
     CDS             2963..3439
                     /locus_tag="VIT19_10065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839367.1"
                     /translation="MSNSNFCRNCGARLARRGWRLWIRGALCDDCARRPGVNTRSRTI
                     IVIGLLAGTAFAFGRYLRPSPPPLIIQRAANSPLSDAPLDLNSLAKRGPGTSGSNEPP
                     ASPDNEATYICGARTQKGAPCRRRVHVAGERCYQHKGRTAMVALEKLTINPDAPKK"
     gene            complement(3532..>5119)
                     /locus_tag="VIT19_10070"
     CDS             complement(3532..>5119)
                     /locus_tag="VIT19_10070"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEY5839368.1"
                     /translation="PKPAAPPPPRAMTIDFDGIMNRVARVPIGADNFGGLGTKPGFLV
                     YATGPAFYYGRQGDRPSQLKLFSLKDRKETTLIDDVGGATMSRDGSKILARQGPGFSI
                     YDATPVGDRTRKPVSTAGLVVDRVPAEEWNQIFNEVWRRYRDFFYVPNMHGYDWVALR
                     EQYKPLLQYVGHRSDLNYIIGEMIAELTVQHAYIEGGDFLIPPRPRVGLAGARFDVDS
                     ASGRYRISRIFQGQNEEDIYRSPLTEVGINANAGDYVLAIDGEEVKANDDIYRLLRNK
                     ADNPVSLTVNSRPVMDGARTISYRPITDETNLIYLDWITKNRKRVEEATNGRVGYIHI
                     PDMGAAGIREFIKWYYPQIDKEGLVVDVRANGGGNVSRMLIERLRRKMLGVNYARTDD
                     IGNTYPDGVFLGPMVALLDQNSASDGDIFPWMFREAGLGPLIGKRSWGGVVGIQNRGV
                     LIDGGNVFVPGSALANSKGEYIIEGYGVDPDIEVENEPAAEIAGRDPQLERGIAEVMA
                     KLKNPVKLPTRQAPPVKTIR"
BASE COUNT         1081 a         1539 c         1417 g         1082 t
ORIGIN      
        1 acaaaatcct ggtaagttac ggtttcgttt ggctgcaata agcgtccggc ttgcgccatc
       61 agaaatcccg ccagagtcgt gtaaccgctg tcttccggca gatccaattt gaggcgccgg
      121 ttcgcgtcgc gcaccgtcaa catgccgctc aggacgtaac ttccatccgg ctctttcgat
      181 atctgcgacc tcacttcttc atcgaactca tcgttaatct cgccgacgat ctcttccagc
      241 aaatcttcca tcgtgacgat gccttccatg ccgccgtgtt cgtcaaccac gacggcgagg
      301 tgcgcccgcg tagcctgcat gcgcgtgagt gccgcgccca gtcgagccgt cgccggaata
      361 aactgtgccg agcgaaccaa ctgcctgaga tcaaatccct cagccggcgg agtttcgaga
      421 tatggttcca ggtctctgcg agaaatagtg ccgacgacgt catccagccg ttcgcgatac
      481 acaggcaggc gcgagtaacc tgatgcgcga aacacctgct tcacttcgtc gagcgtcgcc
      541 gtttgcggaa ttccctggac ttcggtgcga ggaatcatcg cttcgcggac ttcggcgtcg
      601 gaaaattcga agatgctatt gaccagacgc tcttcgactt cgatgtgtcc cttgcggcgc
      661 gaaacgtcga tcagctgacg cagttcgtct gccgtataaa ttgatgcgtg ttccgaagtc
      721 ggatgcagtc cgagcagacg cacagtcctg gtgccggccc aatcaagcaa ccgaatcgga
      781 taagaaaaag tcttgtagaa gagtagcatc ggcctggcga tagccagtgc agttttctct
      841 gcgcgttcga gggcgatcgt tttcggcgcc agctcgccga ggacgatatg cagaaaagtg
      901 atgatgctga acgcaaccgt gaacgctatc gtgtgcagca acgtttccga gactcttcct
      961 cgcaggggaa tttccaaaag gtgcgcgatg gcgggctcgc caatccagcc gagcgccagc
     1021 gaagccaagg tgatgccgag ctgcgtcgcc gaaatgtaag cgttcaggtt atcgactaag
     1081 ccaaggagcg ttttggcccg gccgtcgccg gccgccgcca ttgtcgcaat gcgcgaccgc
     1141 cgcacgccga cgagcgcaaa ttccgaagcc acaaagaacc cgttggcgag aaccaggaag
     1201 aaaaccgccg cgatcttcag cgtctcaagc atggctaata gtagttagct gaacgcgggc
     1261 gacgcaagaa gactaagcat tgttaccagc gactccgcgc ctggatagtt caacctcgtc
     1321 agaaaacgcc gagccttcgg cactctctaa agctcttacg ccggccgatt cgaatagatt
     1381 attgagtgaa aatggtgcac ccggcacgac tcgaacgtgc gaccccctga ttcgtagtca
     1441 ggtactctat ccagctgagc tacgggtgcg tgaaggaata actggagttt aaagtctcaa
     1501 gtttcaagtt tcaagtgtgc gtgtcagaac cgcgagcggt agcgaccgga tctacatgca
     1561 acctaacaaa cgattgggca acgggcgaaa tcccagcact gaggaccttg tttcttcaag
     1621 gttggcagct tgatccggtc gctaccgctc gcggttctga cacgcgcccg cgctatttcg
     1681 cgtaataccc ggtcttggtt ttcgcaatta gatcaggccg cgtgacgtca acgcggatcg
     1741 ctcgccattt gccgtcgcgc gtctgcgggt ttggtggttg ataagcaatg ctgtagagcg
     1801 tgcgcaggtg cgcggcaagc tcggcatagg ttctggccat ttgatcgagc cgccgaatat
     1861 cgctcacctg ccctccggtg cgatcagcca gtatctgtag acgcgtccgc gcggccgagt
     1921 actgcgcgat gattcgcgga tcaggaagcg gcaaacgtct cggatcgccc gacggcagcg
     1981 ccaaaggaaa aatcgtaaca ccctgacgat cggcatcgac taacaccgaa ttcaagtccg
     2041 aagtggcctc tggtttgatc acagtgctta cttccaagtc tgtggctttt gcgacagccg
     2101 cgcgatcaga cttgcgcact tgagtgtcga gaccgtccgt caacgcaacg atcgctttgc
     2161 ggcgtttccc ctcagtggcg agttgtttca gcgagtattt caatgcgtcg taaaccggcg
     2221 aatcgccgga accgctggcc agcgtaattg cgtaagcagt cttctgacga tcggtcgtga
     2281 agcccgcgag ctcgcgcacc cctttgccgt tgaacacaat caccgcaacg cgatcttcgg
     2341 gtgcgagcgc atccaaaaat ctgatcgccg cctgctgaat ctgctggcga aaattcaccg
     2401 tcgaacccga catgtccagc agcatcacca aactaaacgg cgactgcgtc ggttcgaacg
     2461 cgactatcgg ccgcttaaca tcatcttcgt agatcgcaaa atctccctgt gccagcgaag
     2521 tgatcgcgcg gccttgccga tcgaccacgc cgacgttcaa ctgcacaagc gaagtatctg
     2581 tctttagaat ctcatcctgc gccgagactg ccgttgaaaa gctgaggaaa aaagacgcgc
     2641 aaaataaggc ggccaggccg aacctggcgc tcgctttgat taagtatgat cccgggaaca
     2701 cgaacattta gttgagtttc acccgatttg agttcgctga ggttttgcag tatccgatct
     2761 cgctgccaat gtttgcaact gcgctggatc gggctactgc accgctccta attttgctcc
     2821 tgcggagctt aacccatttt tttcacgaga agccataaac atttggccgc tctgcggcta
     2881 agacaaacga cctgcgtcta tcccatcgca atgcttccaa tcgaaatata atccgcgtgc
     2941 ttcacttccg gaggctccca ctatgagcaa ctccaacttc tgccgaaact gcggtgcgcg
     3001 gctcgcgcgt cggggttggc gactgtggat acgcggcgca ctctgcgacg attgcgcccg
     3061 gcgaccaggc gttaacacac gcagccgaac aatcatcgtc atcggtttgc tggcaggaac
     3121 cgcctttgct tttggccgct atctgcgacc gtcaccaccg cctttgatta ttcaacgtgc
     3181 ggcgaactcg ccgctgtcgg atgcgccgct cgatctcaac tcactcgcaa aacggggtcc
     3241 cggcacttca ggttcaaacg agccacccgc gtcccctgat aacgaggcga cttacatctg
     3301 cggcgcgcgg actcaaaaag gcgcgccatg tcgccgtcgc gtgcacgtcg ccggcgaacg
     3361 ttgctaccaa cacaaaggcc gaaccgccat ggtcgcgttg gagaaattaa ccatcaaccc
     3421 cgacgcgcca aaaaagtagc ccgcgcgaaa tgatcacgcg ggctcttagt cagtcgcaaa
     3481 gtggcacggg cgtcgagccc gtgaaccacg cgcgagatgc gcgtgccact tctaacgaat
     3541 cgtcttcacc ggtggcgctt gtcttgtcgg cagcttcacc gggtttttca gcttcgccat
     3601 aacttcggcg atgccgcgtt caagttgcgg gtcgcgaccg gcaatctcgg ccgccggctc
     3661 gttctcaact tcgatatcgg gatccacgcc gtagccttcg atgatgtact cgcctttgga
     3721 attcgcgagc gctgagcccg gcacgaagac gttgccgccg tcgatcagaa cgccgcggtt
     3781 ttgaatgccg acgacgccgc cccacgagcg tttcccgatt agcggtccaa ggccggcttc
     3841 gcggaacatc cacggaaaga tgtcgccgtc cgaagccgag ttctgatcca gcaacgcgac
     3901 catcggcccg aggaaaactc catcaggata ggtgttgccg atatcgtctg tacgcgcgta
     3961 gttaacgcca agcatcttgc gtcgcaaacg ctcgatcagc atgcgcgaaa cgttgccgcc
     4021 gccattggcg cgcacatcga cgaccagacc ttccttgtcg atctgcgggt agtaccactt
     4081 gatgaattcg cggatgccgg cggcgcccat gtcgggaatg tgaatgtagc ccacccggcc
     4141 gttggtcgct tcctcgactc gcttacggtt cttcgtaatc caatcgagat agatcagatt
     4201 cgtctcgtcc gtaattgggc gataagaaat ggtccgcgca ccgtccatta ccgggcggct
     4261 atttaccgtc agcgaaaccg ggttgtcggc tttgttgcgc agcaggcgat agatgtcgtc
     4321 gttcgccttc acttcttcgc cgtcgatcgc cagcacgtaa tcgccggcgt tcgcgttgat
     4381 gcccacttcc gtcagcggcg aacgataaat gtcttcttcg ttttgcccct gaaagattct
     4441 cgagatgcga tagcgtcccg aagcggaatc aacgtcgaag cgcgctccgg ccagaccgac
     4501 gcgcggccgc ggcggaatca gaaagtcgcc gccttcgatg tacgcgtgct gcacggtcag
     4561 ctcggcaatc atttcgccga tgatgtagtt caggtccgaa cggtgaccga cgtactgaag
     4621 cagcggcttg tactgctcgc gcagcgcaac ccagtcatag ccgtgcatgt tcggtacgta
     4681 gaaaaagtcg cgatagcgcc gccagacttc gttgaatatt tggttccact cttcggcggg
     4741 aactcgatcg acaaccaatc cggccgtcga aacaggtttg cgggtgcggt cgcccacggg
     4801 cgtcgcgtcg tagatcgaaa agcccgggcc ttgtcgggcc aggatctttg agccgtcacg
     4861 cgacattgtc gcgcccccaa cgtcgtcgat cagcgtggtc tcttttcgat ctttcaacga
     4921 gaagagtttg agctgtgaag gacgatcgcc ctggcgtccg tagtagaacg caggcccggt
     4981 ggcgtaaacc agaaatcccg gcttagtccc gagtccgcca aagttgtcag cgccaatcgg
     5041 cacgcgcgcc acgcgattca tgatcccgtc gaaatcgatc gtcattgctc tcggcggcgg
     5101 cggcgcggcg ggtttcggc
//
LOCUS       DATDBY010000540         4394 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_22199, whole genome shotgun sequence.
ACCESSION   DATDBY010000540 DATDBY010000000
VERSION     DATDBY010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4394
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22199"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VIT19_10075"
     CDS             complement(<1..209)
                     /locus_tag="VIT19_10075"
                     /inference="COORDINATES: protein motif:HMM:NF014755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEY5839369.1"
                     /translation="MTARAIWKGNLKLNSTKLPVKLYSAVKDQTVRFHILDVKSKTRV
                     KQHMINPETGDEVSKEEIQKGFEVEP"
     gene            complement(558..779)
                     /gene="infA"
                     /locus_tag="VIT19_10080"
     CDS             complement(558..779)
                     /gene="infA"
                     /locus_tag="VIT19_10080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEY5839370.1"
                     /translation="MAKDDLVPAEGVIIDKQPNAFFKVKLDNSSHVVLAAVSGKMRKH
                     RIRILVGDRVSVEMSPYDLSRGRITYRYK"
     gene            complement(799..1158)
                     /locus_tag="VIT19_10085"
     CDS             complement(799..1158)
                     /locus_tag="VIT19_10085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839371.1"
                     /translation="MENEMHELRSIGPELVTPDRGDDSVGAGGLHAPEVNLAGRKMNG
                     LRVYVNILPEERAKDSGAFYSRRENGPFYRWTLADRHWSASRVSSANFSSKDLSATSW
                     KLVPTALQRSIVDHYQD"
     gene            complement(1222..2115)
                     /locus_tag="VIT19_10090"
     CDS             complement(1222..2115)
                     /locus_tag="VIT19_10090"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HEY5839372.1"
                     /translation="MKTASEKTGPLKKGLNWGTAIFLTISHVLAIGALFFWSWPALIT
                     GVILYCVANLGVGMGYHRLITHRAYKVPRPVEYFLVTCAALSLEGGPIQWVTTHRIHH
                     AHTDRVGDPHTPRDGGWWAHVGWILTGAAQDHDQETLARYTPDMIKDRYYVWLTKYYY
                     VPLIVVGLGLLAFGGFGVMLWGVFLRVTLGLHATWLVNSATHMWGRQRFETGEDSRNS
                     WWVALLTFGEGWHNNHHAHPTSARHGLKWYEIDFNWWGIRALQFLGLARRIKRVRFNS
                     SATMWQLVTGDKKRKPSYERI"
     gene            complement(2118..2384)
                     /locus_tag="VIT19_10095"
     CDS             complement(2118..2384)
                     /locus_tag="VIT19_10095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839373.1"
                     /translation="MIVCEFCLHYTPAGDCRLGIKIPKGMSCREFNPGIQKFCENPAD
                     FVSRNQIVQMATYFGFQRTELKKIKVMAATEELRSAVAPGVGNI"
     gene            complement(2390..2785)
                     /locus_tag="VIT19_10100"
     CDS             complement(2390..2785)
                     /locus_tag="VIT19_10100"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEY5839374.1"
                     /translation="MGIKERRIGSVTILHTDAMLRIKLRFGGSSVPLADAAAALLASG
                     RKHILLSLDGVNSISAKNLGELVATYVAVKNGGGQFKLVNLKPMVRQLMQATNLFAVF
                     QLHDTEANAIKSFLAEAGQTTGNVLSEEA"
     gene            3379..>4394
                     /locus_tag="VIT19_10105"
     CDS             3379..>4394
                     /locus_tag="VIT19_10105"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY5839375.1"
                     /translation="MKVLLVNPEFPDTYWSFRHALPFEGKRCAFPPLGLLTVSALLPA
                     SWERRLVDLNIEKLRASDIEWADMVMATAMLVQEDSLRDVVRRAKARGKRVVIGGPYI
                     TTTIHDLPEADHIFLGEAETTLPQFIEDLARGEAKRSYQAAERPPLSATPLADFELAN
                     MKRYSAMSVQYSRGCPFSCEFCDIIEIYGRVPRTKSNQQMLVEFQALYDLGWRGTLFV
                     VDDNFIGNKKNVRLLLPEIAKWQKERDYPFSLLTEASLNLADDDALLASMRDAGFHRV
                     FIGIETPVAESLHEAQKPQNRGDLLGSVKKIQSYGMEVMAGFIVGFDNDPLDIFERQI
                     DFIR"
BASE COUNT         1037 a         1206 c         1115 g         1036 t
ORIGIN      
        1 ggttcaactt caaagccttt ctgaatttct tcctttgaga cttcgtcgcc tgtctcggga
       61 tttatcatgt gctgcttaac gcgggttttg ctcttaacgt caagaatatg aaagcgcacg
      121 gtctgatcct taaccgccga atacaacttc accggcaact tcgtggaatt cagcttcaga
      181 ttccctttcc agattgctcg cgcagtcatc atgccctcgc agtttgggcc gcctcaaccg
      241 gcggacagcc tgaacaacga atctcgattt cgatcgtcgt ctccacgcac atcacgcaca
      301 gcggcccgtc gcagtccacg caacgaacgt ccgtctggta tgcgtacgcc tgactgcatg
      361 ccggacagat tccgccgtcc tcctccagcc accaaggccg gtttcgctta ggttttggca
      421 ttctccggga actcttagag catttcgagt tccacaaatt cagtttttgg aaagaaggtt
      481 agaaagaaga ataggaaggt ttagagccaa tgcgagtggg aggcccttgt cgtctctaac
      541 tgccgacggg aacgaattta cttgtatcga taagtgatgc gtccgcgcga caaatcgtag
      601 ggcgacatct cgacgctgac acgatcgccg accaggatgc gaatgcgatg cttgcgcatc
      661 ttgcccgaaa ccgcagccag caccacgtgc gagctgttgt cgagcttgac cttaaaaaaa
      721 gcgttgggct gcttgtcgat tatcacgccc tccgctggaa ccagatcatc ttttgccatt
      781 cagtctttct ccttaaactc aatcttgata atggtcaacg atgcttcgtt gcagtgccgt
      841 gggaacgagc ttccaactgg tcgcgctcag gtctttgctt gaaaagttcg ccgatgacac
      901 gcgcgaagcc gaccagtgcc ggtcagccag cgtccatcga taaaaaggtc cattctcgcg
      961 acgactataa aacgcccccg aatctttggc gcgttcctcc ggcagaatgt taacgtaaac
     1021 tcgcagaccg ttcatctttc gaccagctaa attaacttca ggagcatgaa ggccgccggc
     1081 gccaacacta tcgtcgccac gatcaggtgt aaccaactca gggccaatcg accgcaattc
     1141 gtgcatttca ttttccatag cgggagaacc gtgccacacg cggaacatga ccaaatgatt
     1201 ctggtccgcg gcttgggctc ttcagattct ttcataagac ggctttcgct tcttgtcgcc
     1261 ggtcaccagt tgccacatcg tcgccgacga attgaatcga acccgcttta tccttcgggc
     1321 cagccccaga aactgcaagg ctcgaatgcc ccaccagttg aaatcaatct cgtaccactt
     1381 caaaccgtgt cgcgctgaag tcggatgagc atgatgatta ttatgccagc cctcgccgaa
     1441 agtaagtaac gccacccacc aactgttgcg cgaatcttcg ccggtttcga aacgctgtct
     1501 tccccacatg tgggtggctg aattcaccaa ccacgtcgca tgaagaccca gggtcacgcg
     1561 cagaaacact ccccaaagca ttacgccgaa ccctccgaat gcgagcaggc ccaggccgac
     1621 cacgataagg ggaacgtaat aatacttggt cagccagacg tagtaacgat ctttgatcat
     1681 gtcgggagta tagcgggcga gtgtctcctg gtcgtggtcc tgcgccgcgc cggttaaaat
     1741 ccaaccgaca tgtgcccacc agccaccgtc gcgcggtgtg tgagggtcgc caacgcgatc
     1801 cgtatgagca tgatgaatgc gatgcgttgt gacccattga atcgggccgc cttcgaggga
     1861 cagcgctgca caagtgacca ggaaatattc gactggcctt ggaaccttgt atgcgcgatg
     1921 tgtgatcagg cgatgatagc ccatgccaac gccaaggttc gcaacacaat aaagtattac
     1981 tccggtgata agcgccggcc agctccagaa aaagagagcg ccgattgcca acacgtgact
     2041 aatggtaaga aagattgccg ttccccaatt tagtcccttc ttgagaggtc ctgtcttttc
     2101 actcgctgtc ttcatgttca aatgtttccc actcctggag ccacagccga acgtagttct
     2161 tcggtcgcgg ccattacttt gatcttcttc aattctgtcc gctggaaacc aaagtaggtg
     2221 gccatctgga cgatctggtt acgacttacg aaatcggctg ggttttcgca gaacttttgg
     2281 atccccggat tgaattcacg gcagctcatg cctttcggaa tcttgatccc cagtcggcag
     2341 tcgccggcgg gcgtatagtg caagcaaaat tcacagacga tcatctcgtt taagcttctt
     2401 ctgagagcac attaccagtc gtttggccag cctcagcaag aaagcttttg atagcattcg
     2461 cttcggtgtc gtgaagctga aagacagcaa acagattcgt cgcctgcatc aactgacgca
     2521 ccatgggctt taggttgacc aacttgaact ggccaccacc gttctttact gccacgtagg
     2581 tcgccactaa ctctcccaga ttttttgcgc tgatagagtt gaccccgtca agactcagca
     2641 agatgtgttt tcgtccagag gccagaaggg cggccgcagc atcggccaac ggcacgctgc
     2701 tgccaccgaa acgcagcttg attctcagca ttgcatccgt gtgcaagata gtaacgcttc
     2761 cgattcgccg ctctttgatg cccaattcgc tcaatagtat tttcccgtga gcgacgcaca
     2821 cgtacccgcc aacgatttcc gttttacgaa attgagctgc tgccttcagg taatctgggg
     2881 aattccagaa gagctgcgga cggagttagc ttgacccaat ctcttaagaa cactacacgc
     2941 gtgccttgtg tgtgtcaaac atgagatata tgccgttgat taaatattgg acagtcgcgc
     3001 gatataacgt gtatgctgca tcctcgacaa gaaaaggtgg aataatcaga gttcaaattg
     3061 atctcttatt gaaagcgcag ggccgatcgt tttattggct ggcgaaagaa accggggtta
     3121 gccacaccac gctttggcgt ctgaaaaagg acaaggctca gggaatcacc ttcaatacgc
     3181 ttgagagtat ttgccgagct ttaggatgtc agccaggtga tgtgctaaaa gtcacccgta
     3241 acggttcgaa caagcagcgt cgctaaggtc cgcgcgccct ttaaagagca acgcccaccg
     3301 gattttgttt tcccctggcg cagacatggc ccgagcatgc ggtagttaag acaattagta
     3361 aaaggctgga ggaaaacgat gaaagttctg ctcgtcaatc ctgaatttcc ggatacatat
     3421 tggagttttc gccatgcgct gcctttcgaa ggcaagcgat gtgctttccc ccctttgggc
     3481 ctgttaaccg tttcggcttt gttgccggcg tcgtgggaac gacgattggt cgatcttaat
     3541 atcgaaaagc tgcgagcatc cgatattgag tgggccgaca tggtgatggc aactgcgatg
     3601 ctggtgcagg aagactcgct cagagatgta gtccggcgcg cgaaagctcg cggtaagcgc
     3661 gtagtaattg gcggacctta cattacgacg acgattcacg atctccccga ggcggatcac
     3721 attttcctcg gtgaagccga gacaactttg ccgcaattca tcgaagacct ggcgcgcggt
     3781 gaagctaaac ggtcatacca ggctgctgag cgtccgccgc tctctgcgac gccactcgcg
     3841 gattttgagc tcgcaaacat gaagcgctac agcgcgatgt cggtgcagta ttcgcgtggc
     3901 tgtcccttct cctgcgaatt ctgcgacatc attgaaatct acgggcgcgt gccacgaacg
     3961 aagagtaatc aacagatgct ggttgaattc caggcgctgt acgatctggg ttggcgcggc
     4021 accttgttcg tcgtcgatga caatttcatc ggcaacaaaa agaatgtcag gctactatta
     4081 cccgagatcg ccaaatggca gaaggaacgc gactatccgt tttcactcct caccgaagcc
     4141 agtctgaacc tcgctgatga tgacgccttg ctcgccagca tgcgggatgc cggcttccac
     4201 cgcgtattca tcgggatcga aactccggtc gcagagagtt tgcacgaagc gcagaagccg
     4261 caaaaccgcg gcgacttact gggctctgtg aagaagattc agagctacgg aatggaagtc
     4321 atggccgggt tcattgtcgg ctttgataac gatccgctgg acatctttga gcgccaaatc
     4381 gatttcattc gtaa
//
LOCUS       DATDBY010000541         6100 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_344158, whole genome shotgun sequence.
ACCESSION   DATDBY010000541 DATDBY010000000
VERSION     DATDBY010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6100
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_344158"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..377)
                     /locus_tag="VIT19_10110"
     CDS             complement(<1..377)
                     /locus_tag="VIT19_10110"
                     /inference="COORDINATES: protein motif:HMM:NF014884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839376.1"
                     /translation="MRPQDIIRKKRDGAELSRDEIAFFIKGVTSGDIAEYQISAWLMA
                     VFLNGMTDTEQSLLTEAMLHSGEILDFSDIPKPKVDKHSTGGVGDKTSLLIAPFAAAA
                     GVCVPMISGRGLGHTGGTLDKLEA"
     gene            complement(374..856)
                     /gene="ispF"
                     /locus_tag="VIT19_10115"
     CDS             complement(374..856)
                     /gene="ispF"
                     /locus_tag="VIT19_10115"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEY5839377.1"
                     /translation="MFRIGIGQDTHRLVAGRPLILGGVRIPFELGAAGHSDSDALAHA
                     LIDALLGAMSDGDIGSHFPDSNPKWKDADSFDMLAHVLKRVEARGFHVVNTDATVMLE
                     RPKLREFIGSMRVNVARALNVDVDCVSVKAKTGEGLDAVGRGEAVAAQAIVLLSNENS
                     "
     gene            complement(966..1649)
                     /gene="ispD"
                     /locus_tag="VIT19_10120"
     CDS             complement(966..1649)
                     /gene="ispD"
                     /locus_tag="VIT19_10120"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: protein motif:HMM:NF013308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEY5839378.1"
                     /translation="MNVAIVVAAGKGTRLGGARPKQFLELRGVPVIVHTLRQFERCQE
                     IQRVITVLPAEDTAGFESLTKQFELKKAGRHVSGGATRAQSVRNGLNAIDDADIVAVH
                     DGVRPFVTPEEIDQVVAAARESGAAVLTSPVADTIKRVQDGRIIETVSRSELRRALTP
                     QCFRFAILKRAYETLDELESSGPEITDDSLLVERLGVAVVTVEGSARNIKITNEEDLV
                     LADAMLNSL"
     gene            complement(1654..2784)
                     /locus_tag="VIT19_10125"
     CDS             complement(1654..2784)
                     /locus_tag="VIT19_10125"
                     /inference="COORDINATES: protein motif:HMM:NF014047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HEY5839379.1"
                     /translation="MTGWPRRANIRRIMRFDVGLIRLIFTAILLGAGYVLRPIPGNRF
                     ISMGAAGLVALAIIFFEMRIRRSSLKTLIGAAVGSILGIIGAYLIGSLISSQESMAVP
                     PHTKTFLTLALTFFMAYVGLMVGAAKGDYLELSALGGIFSDKAARRDIKVLDTSVIID
                     GRIADVAETGFLTGTLIIPQFILRELQQVADSPDSSKRQRGRRGLDMLQRLRNNSSLD
                     IQIVETDFPSVREVDLKLIELGKQLDAVIVTNDFNLNKVSQLRGVSVLNINELANALK
                     PVVLPGEAMRVFILKEGKEYNQGVAYLDDGTMVVVDNARRLIGKNADIAVTSVLQTTA
                     GKMIFGRLWDDGDAAGNGERPRRPLREVKSAPALTRISDTES"
     gene            2883..3299
                     /locus_tag="VIT19_10130"
     CDS             2883..3299
                     /locus_tag="VIT19_10130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839380.1"
                     /translation="MSEPKYRQRGYMDSDRGREEPKPKQKPQPRDREGPRSPRMMAYG
                     EKVKCSSCSAVVPTNLSADSTCPKCNSDLHTCRQCKYFDPASRFECRKPITARIMNKG
                     GRNTCELFASRTVIERETSSGKPTDARQAFANLFKK"
     gene            3383..5245
                     /locus_tag="VIT19_10135"
     CDS             3383..5245
                     /locus_tag="VIT19_10135"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY5839381.1"
                     /translation="MRNPKLPLNVALMLLSLPIAASAQDSYLCKQLDRIRAEENMPAI
                     GAGVIIPDPGYPSTAAQPFRFIMCASGVEKFGAPKKVTMSTLFPLGSISKPISGLLIA
                     RVIANEKLKANPGLRWNTKLIQIFPEIATLPGSNRCYDQRTVADMMAHTAGFPHVPRT
                     EPSDQWASTGETTVERRRRYVLAAVLDTPFWDYRATPPGPAANCFDNSGQPLPQLEEW
                     YNGGPIIPAHMVEVVTGRSWEDLMRHPGPTTAGPGLMIGSVPDLSVAPEPFAHWHDYA
                     QNGIPASQPNPGPAPTNGPAGNVYLTVPQMARFLTQFMDATKDQVNRQLPDDERADLL
                     TTHGLSRYNRLGWRIRQLDTAHFGNVARWQTNNTLYHNGSNAAMFAEAYIVPSQNAGM
                     FLSLNADGPYDANLDLVIPNRDDARKKVFAELAALRLHYGDAVDIIQQHAKATASING
                     VVTRNASVITDGRLTTEWTAPRGTSSTTITLTYPDPISIDRIVVVEDGGENIKQYELA
                     YQDTSNAWHIVAKNTSGKDLIFPHRIFNVSRPAQQIQKLGGSPLAQAKKIRFRILNSS
                     QPPEIVEIAAANLQGRPHRPLWWRRGFAEALAPKGPIIDPGPRMPMDRVIKRNQ"
     gene            5442..>6100
                     /locus_tag="VIT19_10140"
     CDS             5442..>6100
                     /locus_tag="VIT19_10140"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY5839382.1"
                     /translation="MNRRDFVTTLGIGAVALGMPKLTLPFSDSPQIAITIDDFYLFRA
                     AQPVAEKRNRALLAALRAHSNLKAGAFIAARHVDSETGKSLVREWGTAGHLIANHTYS
                     HWEYHNRSFEEFANDVMRADAVLKDLPGFTKFFRFPMLKEGNTLERRDKMRAFLKQRG
                     YRMGYVTIDASDWYIDQRLRARLAANPKADLNGYRDFYLNHLWDRAIYYDGLSRRALG
                     R"
BASE COUNT         1382 a         1806 c         1647 g         1265 t
ORIGIN      
        1 gcttccaact tgtcgagcgt accgcccgtg tgcccgagac cccgccccga aatcattggg
       61 acgcaaactc ctgccgcggc agcgaagggc gcgattaaca aagaggtctt gtcgccgacg
      121 ccgcccgttg agtgcttatc aacttttggt ttgggaatgt ctgagaagtc gagaatctct
      181 cccgagtgca acatcgcttc ggtgagcaag gactgctcgg tgtcagtcat gccgttcaaa
      241 aataccgcca tcagccacgc cgagatctga tattcggcga tgtcaccgct cgtgacgccc
      301 ttgatgaaaa acgcgatctc atcgcgcgac aattctgcgc catcacgctt tttgcgaatg
      361 atgtcctgag gtctcaactg ttttcgtttg agagtaaaac gatcgcctgg gcagcgacgg
      421 cttcgccgcg accgacggca tccaatcctt cacctgtctt cgctttcacg ctgacgcaat
      481 cgacgtccac gttcaaagca cgcgccacat tgacccgcat cgagccgatg aattcgcgca
      541 gtttcgggcg ttccaacatc acggtcgcgt cggtgttaac gacatgaaat ccgcgcgctt
      601 caacccgctt tagcacgtgc gccagcatgt caaagctgtc ggcatctttc cactttggat
      661 tgctgtcggg aaagtgacta ccgatgtcac cgtccgacat ggcgcccaac agcgcgtcga
      721 tcaaagcgtg cgccagcgca tcagaatcgg aatgacctgc cgcgcccaac tcgaaaggaa
      781 tgcggacgcc gccgagaatc agcggacgtc cggcgacgag gcgatgcgtg tcctgaccga
      841 taccgatgcg aaacattgaa aacgtgtgct ttgtgcttgg tactttgtac ttggtacttt
      901 gtgcttgctt tgctcgtggt gcttcgttga attcacgtca aagtacaaag tacaaagcac
      961 caagttcaga gcgaattgag cattgcatca gctaacacca gatcttcttc gttggtaatc
     1021 ttgatgttac gcgcgcttcc ttcaaccgtg acgacggcaa cgccaagccg ctcaaccaac
     1081 aaactgtcat ccgtgatctc gggccccgag gattccagct catccagcgt ctcgtacgcg
     1141 cgtttaagaa tcgcaaagcg aaagcactgt ggcgtcagcg cgcgtcgcaa ttcagagcgg
     1201 gaaacggttt caattatccg gccgtcttga actcgcttta tggtatcagc gaccggcgac
     1261 gtgagaacgg ctgcgccact ctctctggct gcggcgacaa cctgatcgat ctcctcaggt
     1321 gtcacgaacg gacgcacgcc atcgtgaacc gccacaatgt ccgcatcatc gatcgcatta
     1381 agtccattgc gcaccgactg cgcacgggtg gcgccaccgg aaacgtgccg gccggctttc
     1441 tttagttcaa actgcttagt tagagactca aaacccgccg tgtcttcggc gggtagcacc
     1501 gtgatgactc tctggatttc ctgacagcgc tcaaactgac ggagcgtatg aacaattacg
     1561 ggaacgccgc gcaactcgag gaactgtttc ggccgcgcgc cgccgagccg cgttcccttc
     1621 ccggcagcca cgactatggc gacgttcatc gggctaggat tccgtgtccg agatgcgcgt
     1681 caaggccggc gcggacttca cttcccgcaa gggccggcgc gggcgttctc cgttgcctgc
     1741 ggcatccccg tcgtcccaca accgtccaaa gatcattttg cccgccgtcg tttgcagcac
     1801 gctggtcact gcgatgtctg cattcttccc aattagccgc cgcgcgttat cgacgacgac
     1861 catcgtaccg tcatcaaggt aagccacacc ctggttgtat tccttgcctt ctttcaggat
     1921 aaacacgcgc atcgcttcgc ccggcagcac caccggcttc aaagcattgg ccaactcgtt
     1981 aatgttaagc acgctcacgc cacgtagctg cgagacctta ttcagattga agtcgttcgt
     2041 gacgatcacg gcgtcgagtt gtttgcccaa ctcgatcaac ttcaaatcga cttcgcgtac
     2101 tgacggaaag tccgtttcga cgatttgaat gtcgagcgag ctgttattcc gcagacgttg
     2161 cagcatgtcc aggccgcgcc gccctcgttg ccgcttggat gaatcaggcg agtccgcgac
     2221 ctgctgcaat tcgcgcagaa tgaattgcgg aataatcaac gtgcccgtca ggaaacctgt
     2281 ttcagccacg tctgcaatac gtccatcgat gatgacggat gtgtcgagga cttttatgtc
     2341 gcgacgcgcc gccttgtcgc tgaagattcc gcccagcgcc gacagctcga ggtaatcgcc
     2401 tttcgccgcg ccgaccatta atccgacgta cgccataaaa aacgtgagcg ccagcgtcag
     2461 aaacgtcttc gtatgcggcg gcacggccat agactcctgg ctactgatca gcgatccgat
     2521 caggtaggcg ccgataattc cgagaatgga tccgacggct gctccaatca gcgtcttcaa
     2581 ggacgagcgg cggatccgca tctcgaaaaa gataattgcc aaagcgacca agccggcggc
     2641 ccccatcgaa atgaatcggt tcccgggaat cggacggagg acgtaacctg cgccaagcaa
     2701 aatcgctgta aatatgagcc ttattagacc gacatcaaag cgcatgatgc ggcgaatgtt
     2761 agcacggcgg ggccagcccg tcaccgatta ttcctgagcg gtgggccaaa cctgtcagcg
     2821 ttgtcggcag ttcggttcta gcctatgatg tcggcgctga aaccaagccc aggaggagcg
     2881 atgtgagcga acccaaatac cgccaacgcg gctacatgga cagtgatcga gggcgcgagg
     2941 agcctaaacc caagcagaag ccccaaccgc gtgaccgcga agggccgcgc tcgccgcgga
     3001 tgatggccta tggcgagaag gtgaagtgct cgtcgtgcag cgcagtcgtt ccgacaaacc
     3061 tcagtgccga cagtacctgt ccgaagtgca actcagatct gcacacctgc cgccaatgca
     3121 aatacttcga tcccgcttca cgctttgagt gtcgcaaacc aatcaccgct cgcatcatga
     3181 acaaaggcgg ccgcaacacg tgcgaactgt ttgcgtcgcg aacggtcatt gaacgcgaaa
     3241 cctcctccgg caagccgacc gacgcgcggc aagcgttcgc taatttgttt aaaaagtaat
     3301 tcgttaccca cgcctccgac atgctcactg gagcttaaac gtctcgcttg ttgattcagg
     3361 aaatttcgaa tggagaaaag caatgcgaaa tcccaagctt ccgctaaatg ttgcactgat
     3421 gctgctctcg cttcccatcg cggcttcagc gcaggattct tatctgtgta aacagctcga
     3481 ccgcattcgc gccgaagaga acatgccggc aatcggggcc ggtgtgatta tcccggatcc
     3541 aggatacccg tcgactgccg cgcaaccttt tcgattcata atgtgcgcca gcggtgtcga
     3601 aaagttcggc gcgccaaaga aagtcaccat gtcgacgttg ttcccgctcg ggtcgatctc
     3661 aaaaccgatc tcaggcctgt tgattgcccg agtaatcgcg aacgagaagt tgaaggcaaa
     3721 cccagggctc cgttggaaca cgaagctcat ccaaatcttc cccgagattg ccacgctgcc
     3781 aggttcgaat cgttgctatg accagcgcac ggtggccgat atgatggctc acactgcggg
     3841 ctttcctcat gtcccccgaa ccgagccatc cgatcagtgg gcctcaaccg gagaaactac
     3901 tgtggagcgt cgacgaaggt acgttcttgc tgccgtcctc gacacaccgt tttgggacta
     3961 tcgcgcaacc ccaccgggcc ccgcggctaa ttgctttgac aacagcggcc aaccgctacc
     4021 gcaacttgaa gagtggtaca acggcggtcc gataatccct gctcacatgg ttgaggttgt
     4081 caccggccgt tcgtgggagg accttatgcg ccatcccgga cccactaccg caggtcctgg
     4141 tctaatgatc ggatcggtgc cggatctatc ggtcgctccc gagccgttcg ctcactggca
     4201 tgactatgca cagaatggta ttccggcttc ccagccaaat ccgggtccgg cgccgacgaa
     4261 cggtccggcc ggaaacgtct atctgacagt tccgcagatg gcgcgtttcc tcacgcagtt
     4321 tatggatgcc acaaaggacc aggtgaatcg gcagctacct gatgatgaac gtgcggacct
     4381 cctaaccaca catggcttgt cgcgctataa ccggctaggg tggaggatta gacagcttga
     4441 cactgcgcat ttcggaaatg ttgcccgatg gcaaaccaat aacaccctct atcacaacgg
     4501 cagcaacgcc gccatgtttg cggaagcgta cattgtgccc tctcaaaacg ccgggatgtt
     4561 cttaagcctc aacgccgacg gcccgtatga cgctaattta gacctggtga tccccaaccg
     4621 ggacgatgcg aggaagaagg tctttgccga gctggccgcg ttgcgtctgc attacggaga
     4681 cgcggtagac atcattcaac aacatgcgaa agcaacggca agtattaatg gcgtcgtgac
     4741 gcgcaatgcc tccgttatca ctgacggaag attgaccacg gagtggaccg cgcccagggg
     4801 tacgtcgtcc acgacgatca cgttgactta cccagaccca atatcgatcg atcgaattgt
     4861 agtggtcgag gacgggggag agaatattaa gcagtacgag ctggcttacc aggacacgag
     4921 taacgcatgg cacatcgtag ccaaaaacac ctcggggaaa gatctgatct ttccgcaccg
     4981 aattttcaat gtgtcgaggc cggcccaaca gattcagaag ttaggcggat cgcctttggc
     5041 gcaggcgaaa aaaatccgat ttcggattct gaattccagt cagccccctg agattgtgga
     5101 aatcgcagcg gctaatctac aaggtcgccc tcatcgtccg ctgtggtggc ggcgaggatt
     5161 tgccgaggcc cttgcgccga agggccccat aattgatcca ggcccgagga tgccaatgga
     5221 ccgggttatt aagcgaaatc aataaccccg gaccatctga tacgcacgcg tcccgcgtgc
     5281 aggcacgcca gaggcatgcg taccggctaa cccccgcatg aacacttttg ctcccggata
     5341 tcgctaataa aagtgcgagc ccgcgtcagg caggtcgttt agaggccggc gttgtccgcc
     5401 gatctggaac aattgcagcg gtaaggcact ccggagacac tatgaatcga agagatttcg
     5461 taactacgct aggcataggc gctgtggcct tgggcatgcc gaagttaacc ctgccctttt
     5521 cggattcacc gcagatcgcg atcacgatcg atgatttcta tctgtttcgc gcggcgcaac
     5581 ccgtcgccga aaagcgtaac cgtgcgctgc tcgccgcgct gcgggcgcac tcgaacttaa
     5641 aagccggagc gttcattgcc gccaggcacg ttgatagtga aacgggaaaa agcctggtcc
     5701 gtgaatgggg cacggctgga cacctgatcg ccaatcacac ctattctcat tgggaatatc
     5761 acaatcgcag ctttgaagag ttcgcgaacg atgtgatgcg ggccgacgcg gtgcttaaag
     5821 acctgcccgg gttcacgaag ttctttcgtt ttccgatgct gaaggaaggc aacactctcg
     5881 agcgaaggga caagatgcgc gccttcctca agcagcgcgg atatcgaatg ggctacgtaa
     5941 ctattgacgc gtcagactgg tacatcgacc agcgcctgcg cgcgcggctc gccgccaatc
     6001 cgaaggccga cctgaatggc tacagagatt tctacttgaa tcacctttgg gatcgggcca
     6061 tctattacga cgggttgtcg cgaagagcac tgggtcgcag
//
LOCUS       DATDBY010000542         2339 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1476229, whole genome shotgun sequence.
ACCESSION   DATDBY010000542 DATDBY010000000
VERSION     DATDBY010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1476229"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            45..1739
                     /locus_tag="VIT19_10145"
     CDS             45..1739
                     /locus_tag="VIT19_10145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839383.1"
                     /translation="MMINGAYIKLSVVLALTSFALFSTSAAGQSSANKPNSTDKAIAA
                     AAQEPRPGNSENKITAAEPKPDGGDNNAATEKPKREYLKDEIDAVKAENAAVREQLRR
                     MEEQQKTMLELVDRLQRRLDGAATTDIPPAAPLPDSQPAAAATAPVINPADTSAAPPT
                     VPLQQANDERYRDGIIIWQTPDDAKIPFLLRFNNNTQLRYLNTTSSPDTFTDHLGNVR
                     EVHNRNDITVNRAMFFLNGYIWDKRLGYSLVVWTSAGAASIIVAGDISWRFSKHITVR
                     AGYTGVPGSRSLVNTFPYYTATDRSMADNFFRPGFTQGVWATGEITKGLNYQAFVGNS
                     VNTLNITANKIDTKLLVAGSVWWEPLGKYGEPGKSVNMYDDYFARKKVRIRLGTSFTR
                     SPEDRFSNLDQSAPDNTAIYNSDGVLTFSTGAFAPGVTVSNALYKMWAIDGGLKYNGL
                     AINGQYYFRWLNNFVSDGPIPETSTFDHGYELSASHFVIPKKLLVYGKSSQVFGQFGN
                     SYEYAGGVKWHFLPTERLWLNFELMRVNKSPYSGAFTPYTAGMNGWVPMLQSIIAF"
     gene            1942..>2339
                     /locus_tag="VIT19_10150"
     CDS             1942..>2339
                     /locus_tag="VIT19_10150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839384.1"
                     /translation="MRQTILLLILALVVAVAWVWVGMSKTTAQASKPGRRSASVQEID
                     GGWPRGYSLPSEAQMVIFQPQAMTWADQKHLVAMSAVSYVAKGEQKPAMGVVKFEADT
                     SVSLTERLVKFTALKITQTNFQTLTKEQTQ"
BASE COUNT          575 a          632 c          622 g          510 t
ORIGIN      
        1 taatacgaac ggtttcagag acggatttta gaaggaacgt taacatgatg ataaacggtg
       61 catacatcaa gctctcagtc gtgttggcgt tgacttcatt tgctttgttc tcgacttctg
      121 ccgccggaca gtcttcggca aacaagccca acagtacgga taaagcaatc gccgcagccg
      181 ctcaggaacc gcggccggga aactcggaaa ataaaatcac ggctgcggaa ccaaaacctg
      241 acggcggaga caacaacgcc gcgactgaaa agcccaaacg agagtatctg aaagatgaaa
      301 tcgatgccgt gaaagctgag aacgcggctg tccgagaaca acttcgccgc atggaggagc
      361 agcagaagac gatgctggaa ctggtcgacc gtttgcagcg ccgccttgat ggcgcggcca
      421 cgacggatat tccgcccgcc gcccctctgc cggactcgca gccggcagcg gctgccacgg
      481 cgccagtgat aaatccggct gacacctcag cggcgccacc gactgttcca ttgcagcaag
      541 caaatgacga gcgttatcgg gatggaatta tcatctggca gactcccgac gatgcgaaga
      601 tccctttcct gctgaggttc aacaacaaca ctcagctcag gtatctcaat acaacctcgt
      661 cccccgacac tttcaccgac catctgggca acgtccgcga ggtccataat cgcaatgaca
      721 ttacggtaaa tcgcgcgatg ttcttcttga atggctacat ttgggacaag aggttgggat
      781 atagcctcgt cgtctggacg tcggccgggg cagcatcaat catcgtagcc ggtgacatca
      841 gttggcgctt cagcaagcac attacggttc gggcgggtta taccggtgtt ccgggaagcc
      901 gatcgctggt taacacgttt ccctattaca cagccacaga ccgcagcatg gcggacaatt
      961 tctttcgccc cggctttacc caaggcgtct gggcgacggg cgaaataaca aaaggactga
     1021 attatcaggc gttcgttggt aacagtgtaa atactctgaa tatcacggcg aacaagatcg
     1081 acaccaaatt gctggttgcc ggcagtgtct ggtgggaacc gttggggaaa tacggggaac
     1141 cgggtaaatc agtcaacatg tacgatgatt attttgccag gaaaaaggtt cgcattcgac
     1201 tgggtacctc gtttaccaga tccccggagg accgtttttc aaatctcgat caatctgctc
     1261 ctgataacac tgcgatctac aattccgacg gcgtcctcac gttctcaacc ggagcgtttg
     1321 ccccgggcgt gaccgtctcg aacgctctct acaaaatgtg ggcaatcgac ggcggcctca
     1381 aatacaacgg attggcgatt aatgggcaat actactttcg ttggctaaac aacttcgtat
     1441 ccgacgggcc gattcccgag acatcgacgt tcgaccacgg ctatgaattg tcggcgagcc
     1501 attttgtcat tccgaaaaag ctgcttgtgt acggcaagag ttcccaggtt tttgggcagt
     1561 ttggcaactc gtatgagtac gccggcggcg tcaaatggca tttccttccg actgagcgtc
     1621 tgtggctcaa cttcgagctg atgcgggtta acaaatctcc ttacagcggc gccttcactc
     1681 cgtacaccgc cggaatgaat ggatgggtgc cgatgttgca gtcgatcatc gctttttaag
     1741 atctgtttta cttcatttta agtggaccca gcgggactcc cacaacgcgg ttaattagaa
     1801 acgcctcgaa ggatacctat cctttcctgt caaaactgac agttataccg atagacgtcg
     1861 aaccctagaa ttcgctggag aatagcccgt gcgccccgcg ctcggcccga tcaactggtc
     1921 tattacgggt aagtgaattc catgcgacaa acaatccttt tacttattct ggctctcgtg
     1981 gttgcggtgg catgggtttg ggttgggatg tctaagacga ccgcccaggc ctcaaagccc
     2041 ggccggcgta gcgcctcggt acaggaaata gatggcggtt ggccgcgcgg ctacagcctt
     2101 cccagcgaag cccagatggt catattccaa ccacaagcca tgacgtgggc agaccaaaag
     2161 catctggtcg caatgtccgc ggtttcgtat gtagccaagg gtgaacagaa gccggcgatg
     2221 ggcgtcgtaa agttcgaagc cgacacgtcg gtgtcgctga ccgagcgatt ggtcaagttc
     2281 acggccctca agatcacgca aacgaatttt caaactctga cgaaagagca gactcagga
//
LOCUS       DATDBY010000543         2326 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1476513, whole genome shotgun sequence.
ACCESSION   DATDBY010000543 DATDBY010000000
VERSION     DATDBY010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2326
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1476513"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1827
                     /locus_tag="VIT19_10155"
     CDS             <1..1827
                     /locus_tag="VIT19_10155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839385.1"
                     /translation="DIVKNWYDKTLGTPYEGTEPPELYHKYVGHDNNRDWYAFTQVET
                     QLTVDKLHNAWHPQIVHDIHQQGAFGSRLFLPPYMQPVEPNVPKQIVEGYTELGNWMA
                     GEMRKAGFQGITTNSTYDAWTPARAYSHYHGGVRILSETASARIASPITVKFEQLNSR
                     EGYSPQKESENFGPIWRGGEWRLRDITNYMTTGAMTLMKHAAQNRERWLQRFYEIGKE
                     SVRPRKKGEVFAFIIPRKKSLGAGEDARESLRKILYRAGVDVSIAESFVAQNKRYENG
                     TLVVKMDQPYGSFAQALLQPRIYPDLRDDSGRPIPPYDVTAHALPLLMNVDVVPAMEP
                     IKFEPHRYLMTTSPSRHCMNPAAVAALYRSFSPSMDEGWTRWVFLKRQEWDKCLKYES
                     ITDRELTAGQLTTYKTIIIPDQSRAAILNGHRKGAMPEEYTGGLGEKGVNALREFVEQ
                     GGTLVCLNRASDFAIEEFKLPVRDVTKGLPRTNFFVPGSILRIELDTNHPIAKGMPKE
                     SIAWVENSPVFEVISAGDAQRGSSPTVREGVSAKVIAWYPRDRDPLLSGWLLGADRLK
                     GKAALVEVSYGKGRIILFGFRPQYRAQSLATYPLLFNAISQR"
     gene            complement(1994..>2326)
                     /locus_tag="VIT19_10160"
     CDS             complement(1994..>2326)
                     /locus_tag="VIT19_10160"
                     /inference="COORDINATES: protein motif:HMM:NF013821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin kinase"
                     /protein_id="HEY5839386.1"
                     /translation="ANLRPHNRVIPRAGVYVTATLIEGQWRRSVTNIGVRPTFGDATE
                     PSVETFVMNWSGDLYGDVLRVRFLHRLRAEKKFSSVDELKSQIDRDVARATRYFERAG
                     VKRSLAMA"
BASE COUNT          537 a          643 c          643 g          503 t
ORIGIN      
        1 gacatcgtta agaattggta cgacaaaacc ttgggcacgc cctacgaagg gaccgagccg
       61 ccggagctgt atcacaaata cgtcggccac gataacaatc gcgactggta cgcgttcacc
      121 caggtcgaga cgcaactgac cgtcgataag ctgcacaacg cctggcatcc ccagattgtc
      181 cacgacattc atcagcaggg cgccttcggc tcgcgcctgt ttctgccgcc gtacatgcaa
      241 ccggtcgaac caaacgtgcc gaaacagatc gtcgagggct ataccgagct tggcaactgg
      301 atggcgggtg aaatgcgcaa ggccggcttt cagggcatca ccaccaattc gacttacgac
      361 gcgtggacgc cggcgcgcgc ctattcgcat taccacggcg gggtgcgaat tttgtctgag
      421 acggcttcgg cccgaattgc ctctccgatc acggtcaagt tcgagcaatt gaattcgcgc
      481 gaaggctaca gtccgcaaaa agagtccgag aactttggtc ccatatggcg cggcggtgag
      541 tggcgcttgc gcgacatcac gaattacatg acaacgggcg cgatgacttt gatgaagcac
      601 gctgctcaaa atcgcgaacg gtggttgcag aggttttatg agattgggaa ggaatcggtg
      661 cgtccgcgga aaaaaggcga agtgtttgcg tttattattc cgcggaagaa gagtctgggt
      721 gcaggagaag atgctcgtga gtcactacgg aagattcttt accgcgccgg tgtcgatgtt
      781 tcaattgcag aaagttttgt tgcacagaac aagcgatacg aaaatggaac gttagtagtc
      841 aaaatggatc agccctacgg ttcttttgct caagcattgc ttcaacctcg tatttaccct
      901 gatttgagag acgacagcgg ccgacccatt cctccttatg atgtaactgc acatgcatta
      961 cctctcttaa tgaacgttga tgtcgttccg gcaatggaac ctattaagtt tgagccacac
     1021 cgatatctga tgactacgtc accatcgcgg cattgcatga atcccgcggc agtcgctgct
     1081 ctatatcggt cgttcagtcc ttcaatggat gaggggtgga cacgatgggt ctttctaaag
     1141 cgacaggagt gggacaaatg tcttaagtat gaatcgatca ccgatcgaga actaaccgca
     1201 ggccaattaa caacttacaa aacgatcatc atccctgatc aatcccgcgc cgcaatcctc
     1261 aatggccacc gcaagggcgc gatgcccgaa gaatacaccg gcggtctcgg cgagaagggc
     1321 gttaacgcct tgcgcgagtt tgtcgagcag ggcggcacgc tcgtctgtct caatcgcgct
     1381 tccgattttg ccatcgagga attcaagcta ccggtgcgag atgtgacaaa aggattgccg
     1441 cgcacgaact tcttcgttcc cggttcgatc ttgcggattg agttggacac gaaccatccg
     1501 atcgcgaaag gaatgccgaa ggaatcgatc gcctgggtcg agaattctcc ggtgtttgaa
     1561 gtaattagtg ctggtgatgc gcaacggggc agtagcccga ccgtgaggga gggcgtttcg
     1621 gccaaagtca ttgcgtggta tccgagagat cgcgatccgc tactctccgg gtggctgctc
     1681 ggcgccgatc gcctcaaagg aaaggcggcg ctggtcgaag tatcctacgg caagggccgc
     1741 atcatcctct tcgggtttcg acctcagtat cgtgctcagt ctctggcaac ttatccgctg
     1801 ctgttcaacg cgatcagcca acgataaatt tggagtgcgc cggcagagcg aagcgacgac
     1861 ggcgctttgg attttgctga aaaccaaaat tggaatcgcg ttcgacggat ccaaagcggt
     1921 gtcgcgctac gaccacccca gcgcggctgc cgcgctgggg accccggtgc ttgccaccgc
     1981 gctccaaatt agctcacgcc atcgccagcg accgcttcac tcctgctcgc tcgaaatatc
     2041 tcgtcgcacg cgcgacatct cgatcgattt gcgatttcag ctcgtcaacc gagctgaact
     2101 tcttttccgc gcgcagccgg tgcagaaacc tcacgcgcaa aacgtctccg tacaaatcgc
     2161 ctgaccaatt catcacgaag gtttcgaccg acggttcagt cgcatcgccg aatgtcggcc
     2221 gcacaccgat gttggtgacg ctgcgacgcc attgtccttc gattaaggtc gcagtcacgt
     2281 aaacgcctgc tcgggggatc acccgattgt gaggccgaag gtttgc
//
LOCUS       DATDBY010000544         3852 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_436744, whole genome shotgun sequence.
ACCESSION   DATDBY010000544 DATDBY010000000
VERSION     DATDBY010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3852
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436744"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(283..780)
                     /locus_tag="VIT19_10165"
     CDS             complement(283..780)
                     /locus_tag="VIT19_10165"
                     /inference="COORDINATES: protein motif:HMM:NF020648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839387.1"
                     /translation="MTDASGGVVFNMLNDGVPLQISWTTANSTNAFLVLDRNGNGTID
                     NGQELFGDLSPQPSSPEQNGFLALAEYDKSQNGGNGNSRVDQADTIFGSLRLWQDSNH
                     NGISEASELHMLPSLSIDSISVDYKESKKTDQYGNKFRYRAKVYDAQHTHAGRWAWDV
                     FLLVQ"
     gene            complement(1525..2298)
                     /locus_tag="VIT19_10170"
     CDS             complement(1525..2298)
                     /locus_tag="VIT19_10170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839388.1"
                     /translation="MLKLTRMLKEHRFATITLTSLGVGLISGVLVWSSLATRPQVEPT
                     VASKTPSVRVLASEKISVGGSSILAVKLQNTSSKDIEAYIISRGKSWVTTNYLLTEQS
                     FASGAIVSDLIPLSDNDSQSLNAFADSTGRFFVSAVVFSDGTGDGDARFVKMLSDERA
                     GTRDQAKKISPHLSGLFRPGSDQLRAITDLEAEIRKLPDKGNESASADYEIGLANAKR
                     KLLKDVKDMKEKLQSNRPDEANIKREKLSRIFTRLAESH"
     gene            complement(2491..>3852)
                     /locus_tag="VIT19_10175"
     CDS             complement(2491..>3852)
                     /locus_tag="VIT19_10175"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY5839389.1"
                     /translation="FNFALYTFAHKVFGVGPENAYLLFKFAVVAQVPLAIVMCWILAR
                     DLTRSLLAATLAGLMIAVCPVIVLYGSQVMTEVPSLWLLASALIVHLRGLRSRRVGLV
                     LAGAALLGLAVNLRETNAFYFPWLVFAPFVIGWKFDRRTIGLVAASLFAFILFAVGPF
                     ALWFALSAGYRAQWYVWFESGRSEAARHPLALANLKPFFAYFFLVSPVVFVSLPFAFA
                     NEWRRRGLTVLLLAAGVGLFANAILILNYSTVINWRYFVTGLPALAPLAANYLLSLGT
                     VKLKSPRRAVASITTLILVVALAMGLLLRTRIHDYRERLVFAKDYIEQLRMLPNDAVV
                     MAGFATVAVTYWRGIRVGQWIHIGTGAGFPAGQLQKRIEEHLRAGERVFIDVDPRWWQ
                     PCSWQTGELREIAAIEAHFRFRHAAPTIYEIRLPDDASATDRPHLENLLPENRPEEVK
                     KCF"
BASE COUNT          913 a         1040 c         1034 g          865 t
ORIGIN      
        1 ctccgggtgc tgaattgtca gttcggccag ggctacctgt tctcgcgtcc ggtggaagcg
       61 agcgcaattg acggttggat ttcccgcacg cctgactggc aagtcgcgct gtttcccaaa
      121 ggtgagttca tcgctcccgc ccccgcgccg gtggtgcagc taagatcggc gtgagttcga
      181 cggcgagagg atcggcgtca acgctcgatt gtttgtaagc aaaaacccgc gagctcttgg
      241 agagcctgcg ggttttcgag ttaatatcag ctgacttcga gttcactgca ccaacaggaa
      301 cacatcccaa gcccagcggc ctgcgtgcgt gtgctgtgcg tcgtaaacct tcgcgcgata
      361 acggaacttg ttgccatact gatccgtctt cttcgactct ttgtaatcaa ccgaaatcga
      421 gtcaatgctg aggcttggta acatgtgcaa ctctgaagct tcggagattc cattgtggtt
      481 actgtcctgc cacaatcgca gagagccaaa aatagtgtct gcctgatcga ctcgtgagtt
      541 gccgttaccg ccgttttgtg acttgtcgta ttcggcaaga gcgagaaatc cattctgttc
      601 cggtgaggag ggctgtggtg acaggtcgcc gaatagctct tgaccattat caatcgtgcc
      661 attgccgtta cggtcaagga caagaaaagc gttggtagag ttggcggtgg tccatgaaat
      721 ctgcaacggg actccgtcat tgagcatatt gaaaaccacg ccgccagacg catcggtcat
      781 tgagaagccg ctaccgtcaa catcaacgac gattggcgat gtattaatcc aatccggaca
      841 actacaactt tcggcttcgt agccagttgg gtccgcacat cggctttgaa acgtcgaact
      901 gcgagtgcac ggcccggcga agaacaaacc tgtgatgcag ccgctggacg ggtacgaaaa
      961 ccaatccgcc accgcaagac atgtgcctgg cgtggggcaa gggtgttccc gattaaaacc
     1021 tcggggtatg ccatcctcgc aagaacaaga gaaagtgccg caagaagcta tttttgattg
     1081 cacgaactgg taccagcgcg tgcagtttga aggagaattt tcgacacaag ctagctcggt
     1141 cggctctaaa aaatcaggat aacatttcgt tagttcgcca aatgtaggac ttccacatga
     1201 acctgtaccg aatacttgtt tggtctcagt tcggttgtca ctgaaagtaa tcgtgttgtc
     1261 ttccattttg taaatgacat cgttaaatga ttgaccatct attgttaaag tgacgcactc
     1321 actaatgtgt ggaatgattt gtctaaatag aaccgaacac gcaaatgcgg aacctgctga
     1381 ggaccagcga gaactgcggt gaccaagaag ctcttaagtg cgaggcgagc tatccgttgg
     1441 tttgacatct tttagtcctc cggtgttggt gcgctgaaaa cttcactatc agcacttggt
     1501 cactatcagc acttggttag cgtgtcagtg agattctgca aggcgtgtga agatccgtga
     1561 aagtttctct cgcttgatgt tagcttcgtc gggacgatta gattgaagtt tttctttcat
     1621 atccttcacg tcttttaaaa gcttcctctt cgcattcgcc agcccgattt cgtaatccgc
     1681 cgacgccgat tcgtttcctt tatccgggag cttacggatt tcagcctcta agtcggtaat
     1741 ggcgcggagc tgatcagagc ccggtcggaa aagccccgac aagtgaggcg atatcttttt
     1801 ggcctggtcg cgtgttcccg ccctttcatc ggataacatt ttgacaaaac gcgcatcgcc
     1861 atcaccggtt ccgtcgctga aaacgacagc gctaacaaag aatctgcccg ttgaatctgc
     1921 gaaggcgttc aagctttgag aatcattatc tgaaagcgga atcaggtcac ttacgatcgc
     1981 gccggaggca aaggattgtt ctgtgagtaa gtagttcgtt gttacccagg atttcccgcg
     2041 actgatgatg taagcttcaa tgtccttgct cgaagtgttt tgtagcttta ccgcaagtat
     2101 cgagcttcct cccacgctta tcttttcact cgccagaact cgcacagaag gagtcttact
     2161 tgcaaccgtc ggctccactt gcggtcgagt cgcaaggctg gaccacacta aaaccccgga
     2221 gatgaggcca actccgaggg aggtcagtgt aattgtcgcg aagcgatgtt ctttaagcat
     2281 tctagtaagc tttaacatgg gaacctccta tgtgagtggc agggagccgt ttaggatcgc
     2341 gactatactc tgtcgttaag gctcgtcaaa ctatttgttt ggcgcaactg gtgaaatatt
     2401 gtgggatatc gcgttaagcc agttaccttg cttaggatgc aggttctgga tgtaggttct
     2461 gaaggcccaa ctgcacctgt tccttcccgc ttaaaaacac ttcttaactt cttcgggacg
     2521 attctcaggc aacaagtttt ccagatgcgg ccgatctgtc gctgacgcgt catcgggcaa
     2581 acggatctcg taaatcgtcg gcgctgcgtg acgaaagcga aagtgtgcct cgattgcggc
     2641 gatttcgcgg agctctccgg tttgccacga gcacggctgc caccagcgcg gatcgacatc
     2701 gatgaatacg cgctcacccg cgcgcagatg ctcctcgatt ctcttttgta gctggccggc
     2761 gggaaacccg gcgccggtgc cgatgtgaat ccactggccc acgcggatac ctcgccagta
     2821 agtcacggca acagtagcga acccggccat caccacggcg tcattcggca acatgcgcag
     2881 ttgctcgatg taatcctttg cgaagacgag ccgttcgcga taatcgtgaa tgcgcgtgcg
     2941 caacagaagg cccatcgcca gcgcgacgac aagtatcagc gtggtgatcg acgcaacggc
     3001 gcggcgcgga ctcttcagtt tcactgttcc gagactcaga agataattcg cggcgagcgg
     3061 cgccagcgcc ggcaaacccg tcacgaagta gcgccagttg atcaccgtgc tgtagttaag
     3121 aattagtatc gcgttggcga acagccctac acccgcggcc aacagcaaga ccgtcaaacc
     3181 gcgcctgcgc cattcgttgg cgaacgcgaa tggcaggctc acgaacacaa ccggcgaaac
     3241 caggaagaag tacgcaaaga acggtttcag gttcgcgagc gccagcggat ggcgtgcggc
     3301 ttcgctgcgg cctgattcga accagacgta ccactgcgcg cgatagccgg cgcttaaagc
     3361 gaaccacaac gcgaacgggc cgacggcgaa taagatgaaa gcgaacagcg acgcggcgac
     3421 tagcccaatc gttcgccgat cgaatttcca gccgatcaca aatggcgcga acacgagcca
     3481 cggaaaatag aatgcgttcg tctcgcgtag gtttaccgcc aatccgagca gtgccgcgcc
     3541 cgccaaaacc agccccacgc gccggcttct cagtccgcgc agatgtacga ttaaggctga
     3601 cgccagcaac caaagcgaag gcacttcggt catcacctgg ctgccgtaaa gcacgatcac
     3661 cggacagacg gcgatcatca gcccggcaag cgtcgcggct aacaacgagc gcgtcagatc
     3721 gcgcgccaga atccaacaca tgacgatcgc cagcggcacc tgcgcgacca cagcaaactt
     3781 gaaaagcagg taagcgttct ctggcccgac accgaaaact ttgtgcgcga aggtgtacag
     3841 ggcgaagttg aa
//
LOCUS       DATDBY010000545         7979 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_864478, whole genome shotgun sequence.
ACCESSION   DATDBY010000545 DATDBY010000000
VERSION     DATDBY010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 7979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7979
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_864478"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(194..403)
                     /locus_tag="VIT19_10180"
     CDS             complement(194..403)
                     /locus_tag="VIT19_10180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839390.1"
                     /translation="MFLLLAWAYFTGLMSSSFWYQLEDTIKQTSSEPNNFVVVIVKVL
                     LWATCVTALVRSFQNADKRTVTLQS"
     gene            complement(603..1589)
                     /locus_tag="VIT19_10185"
     CDS             complement(603..1589)
                     /locus_tag="VIT19_10185"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY5839391.1"
                     /translation="MKKLLFLSCLFLCLFPGDRLAQPREGHILTPDGVKLFYKIVGSG
                     PEILVVVHGGPGNTMHSVLADFAPLAAGRTVIYYDQRGNGGSDLIRERDRLGAAKHVA
                     DLEAVRKHFKLDKVTLLGNSWGGLLISFYAVAHPERVERMILHHPAPPTLEFLIEDAH
                     EIQDRIRTRYDAEQEKRYAFVSNRRNWLDAKDPRALCREFFTMLLPTYVASEESTRKF
                     KGDVCAGSEAAVRNQQFVNHQVWQSLGAFNVLPSLSVVKAPVLIIHGAADPIPVRSSE
                     AWATNFSNARLLLIRNAGHVSQVETPEIFFPAVETFLNGEFPAEAKAVRRPN"
     gene            complement(1613..2122)
                     /locus_tag="VIT19_10190"
     CDS             complement(1613..2122)
                     /locus_tag="VIT19_10190"
                     /inference="COORDINATES: protein motif:HMM:NF024645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain-containing protein"
                     /protein_id="HEY5839392.1"
                     /translation="MFCPNCGNQNSADQKFCRSCGLGLQKVAQTLSEQLPTKLDVSLQ
                     QKKERYEKLGVAALSVFGAGVAIPVLYGIFYKMMYTQGKVIAGLGLLALIIVMGCGLL
                     SVILFAKANEVKETSANQPTPEPIDLKSADTRELPEYTAQQTPAFSVTDRTTELLAEE
                     TKAQAKGNR"
     gene            complement(2180..2569)
                     /locus_tag="VIT19_10195"
     CDS             complement(2180..2569)
                     /locus_tag="VIT19_10195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839393.1"
                     /translation="MRFEVIAAFIVGALLPVLETARRGINHWTVEFTTMFEDYVAGAL
                     LLIGAWASYRARSWGAPFLLLAWAYFTGLMSSSFWWQLEETIRQISAEPNSFVVLVVK
                     FLLWVTCVASLVLSFRRVARVPLDVQD"
     gene            complement(2583..3071)
                     /locus_tag="VIT19_10200"
     CDS             complement(2583..3071)
                     /locus_tag="VIT19_10200"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEY5839394.1"
                     /translation="MSNPQISLLLALIDQAFDHRAWHGTNLRGSIRGLRVDDVTWRPA
                     PGRHNIWETVVHAAYWKYIVRRRILSEARGSFSLEGSNWFVRPTDGNSTEADWKNDVK
                     LLVEAHRSMRAAVAGLRDAQLKVTPKGSKVSNVALITGIASHDLYHAGQIQLLKKLRV
                     AK"
     gene            complement(3087..3698)
                     /locus_tag="VIT19_10205"
     CDS             complement(3087..3698)
                     /locus_tag="VIT19_10205"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEY5839395.1"
                     /translation="MDKIDSKLFLPLILGTNRKDRKSVFVAEWLHGEMQKRAEIETRL
                     FDVKDFALPQDDYGTGIKDAFPEWRDAIIRADGLVIVTPEYNHGYPGALKSVLDLLLK
                     EYIHKAVALVGVSGGTFGGTRVVESLVPVVRELGLSVTFADLNFPKVQEKFDQNGVLL
                     DSAYEKRAKDFLDELVWMSRALKWGRENLSSKHHPLQDDDVSQ"
     gene            complement(3720..4574)
                     /locus_tag="VIT19_10210"
     CDS             complement(3720..4574)
                     /locus_tag="VIT19_10210"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:NF025341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pepsin/retropepsin-like aspartic protease family
                     protein"
                     /protein_id="HEY5839396.1"
                     /translation="MNIPLEIDNNIILMQVGVNNSKPLRFIFDTGASHTILHSRRGSE
                     LGLKPEEQVSGTATGGAIEGSLTSGVSLKVVGAEVSNQQIGMIDFPVPPGFEFDGVIG
                     YDFINAFVVEIDYLKKIMNLYDPRTYSYRGRGEVIPLVLDDRRIPLVHVTIIPPAGAQ
                     LNAVLGVDTGADRAFIFNNPFVKKHGLVAAMTNIKESAGRGAGGEQQIVVGRAKAAQV
                     GRFVFTNPTVGLVRDPERDGAAKEGDGVIGGEIFRRFKVIIDYSRRQMILEPNHDLNA
                     PYPVDPGE"
     gene            complement(5118..6224)
                     /locus_tag="VIT19_10215"
     CDS             complement(5118..6224)
                     /locus_tag="VIT19_10215"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5839397.1"
                     /translation="MNVRSLSTPEDFQRYVDFTEDVYRENPHWVPPDAHHLTKLLSGQ
                     GGFGSELKIQPFWVEDGGRVLATVTAVTSPVYDRHWNEKMGHLLFFEALADQNEAVES
                     LLSAACDWLKTTGCEAVRLSMLPGMQLPITIDAYDEVPTIFHTFNPAYYHSYIKNGGF
                     VTETGVVQYQIQFTRELVQSYRDMVERATSSGISLRSCDFERLEQENEALTNIFNEAF
                     SAHFGFMPLPTEVMRGLTVELKDLLVADFMVFAEADGQIAGAVYSLPDLNQALHSMRG
                     RSIEENLTEFQQHLASVDHGVLLIIGVKKEYRGRGVNLALAAKSYLAMIERGYKTASY
                     TVVMDENWPSRKTAEKLGGRVTRNFNVYRKEFKR"
     gene            complement(6250..6870)
                     /locus_tag="VIT19_10220"
     CDS             complement(6250..6870)
                     /locus_tag="VIT19_10220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839398.1"
                     /translation="MDEKLRREMIFKVLGWGTFVYLIVVGYSINQSGLFEFRSDTRQD
                     VVDSKGKLHKAFEELENAQFERADQLESEARESNDRITRRVAEAKASPEDAMEAKDRE
                     KKEQPREDKFSDAAKLKVEAAQLRMDVFLAREQRMDSHQRAQGLIGGALFYGLVLYPV
                     LVWGVYKRTDPGVGTEKDVIPLKWALVYAFAMGILTCVVAYRTAMN"
     gene            complement(6937..>7979)
                     /locus_tag="VIT19_10225"
     CDS             complement(6937..>7979)
                     /locus_tag="VIT19_10225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839399.1"
                     /translation="PANIGGFRETPPDPNLKPDYSERFKLEGYNRIVQEHAHQFYKEW
                     TGPNFPRMLMIEIQHANPYYDDSYAVNSANLGPYGDAITYELIPYIEEKFRGIGKGWA
                     RFMYGGSTGGWEAMAAQVFYPDEYNGAYIACPDPIDFRAYMVVDIYRHKNAYYIDDSW
                     KKTPRPGKRNYLGELAGTIEDMNHMELALGTKSRSGGQFDIWEAVYSPVGADGYPKPI
                     WNKLTGEIDRSVAEYWREHYDLGYILKRDWQKLGPKLAGKLHIYVGEADNYYLNNAVY
                     LVEDFLKTTKDPAYGGEVDYEPRAEHCWNGDHTRPNALSRLRYHQMFMPRAVERMLKT
                     APPGADLKSWRY"
BASE COUNT         1793 a         2309 c         2041 g         1836 t
ORIGIN      
        1 gttccaaatc agttcgacaa cttcatcggt tgtaatgcca tgccgagcca actcattctc
       61 atcaaattct aaatcgaact cgccgggatc gaacttttgc cagaagacca cggggaaata
      121 ttgtatctca ctatccaagc catcagattc agcgtcggca cgttgctgca gctaaaggtg
      181 tttccgcctc tcgctaactt tgcagtgtaa ccgtccgttt gtccgcgttt tggaaggaac
      241 gaaccagggc agtgacgcac gtggcccaca acaaaacctt cacgattacc actacgaaat
      301 tatttggttc ggatgaagtt tgtttaatgg tgtcttcgag ctgataccaa aaactgctgc
      361 tcatcaatcc ggtgaagtaa gcccacgcca ataacagaaa catcgctccc cacgaacgcg
      421 cgcgctagga gcccaagcgc cgatgagcgg caacgcgccg gccacgtaat cctcgaacat
      481 cgttgtgaat tcgaccgtcc agtgattgac acctcgccgg gctgtctcca gcacgggcag
      541 caatgctccg acaacaaacg cggcaattac ttcaaatctc atttggattg aaaccgtctc
      601 tctcagttcg gacgccggac agccttagcc tcggccggaa actcgccgtt caagaaagtt
      661 tcgacagcgg ggaagaaaat ctcaggcgtc tcaacctggg aaacgtgtcc cgcgtttctt
      721 atcagcagga gtcgcgcatt cgaaaaatta gtagcccatg cttcggacga tctcaccgga
      781 attgggtcag ccgcgccgtg aatgatcaga accggggcct taaccacact gagcgacggc
      841 aaaacattaa aggcaccgag cgactgccaa acctggtgat tgacgaactg ctgattcctg
      901 actgcggctt ccgagccggc gcagacgtca cctttgaatt tccgcgtgct ttcttcgctg
      961 gcaacgtacg tgggaagaag catcgtaaaa aactcgcggc aaagcgcccg cggatcttta
     1021 gcgtccagcc agttccgccg atttgaaaca aatgcgtacc gtttttcttg ctccgcgtca
     1081 taacgcgtgc gaatgcggtc ctgaatctca tgagcgtctt ctatgagaaa ctccagcgtg
     1141 ggtggagccg gatgatgaag gatcattcgt tccacgcgtt ccggatgcgc gacggcataa
     1201 aaggaaatca gcagtccgcc ccaggaattt cccaggaggg tcactttgtc gagtttgaaa
     1261 tgcttcctga cagcttccag atcggcaaca tgttttgccg ctccaagtct gtcgcgctct
     1321 ctgattaaat ccgatccgcc gttgccccgc tggtcgtagt aaataactgt tcgcccggcc
     1381 gccagcggcg caaaatccgc caaaaccgaa tgcattgtgt taccaggacc gccgtgaaca
     1441 acgactaaga tttccggccc gctgccgacg attttgtaaa agagtttgac gccgtcgggc
     1501 gtgaggatgt gaccttcacg cggttgtgcc agacggtctc ccgggaaaag gcagagaaat
     1561 aagcacgaaa ggaataacag ctttttcatg agcttgtccg ctggttaatg ttctaacggt
     1621 tccctttggc ctgggctttg gtttcctcag ccagcaattc tgtggtgcga tcagtcacgc
     1681 tgaatgcggg agtttgttga gctgtgtact caggtagctc acgagtatca gccgatttca
     1741 aatctattgg ttccggtgtg ggctggttcg ccgacgtctc tttcacctcg ttagccttgg
     1801 caaacagaat cactgacagc aagccgcacc ccatcacaat tatcagtgcg agcaatccca
     1861 ggcccgcgat gactttgccc tgcgtgtaca tcatcttgta gaagatgccg tagagaacgg
     1921 ggatggcgac gcccgcgccg aaaacgctca acgccgcgac gcctaacttc tcgtaccgct
     1981 cctttttctg ctgaagcgat acgtcgagct tcgttggcag ttgctcactc agcgtctggg
     2041 ccaccttttg caggccaagg ccgcacgacc ggcagaactt ctggtcggct gagttttggt
     2101 ttccgcaatt tgggcagaac atcgtatgcc tcgcacgagg ttgataatat tcaactacgt
     2161 tgcggcgaac ccctgagttt caatcctgca catctaacgg cacgcgcgcc acgcgccgga
     2221 aggaaagcac cagggacgcc acgcaagtta cccacaagag aaacttaacg acaagcacta
     2281 cgaagctatt cggttcggct gaaatttgcc ggatggtttc ttcgagctgc caccagaaac
     2341 tgctgctcat caatccggtg aagtacgccc acgccaacaa cagaaacggc gctccccacg
     2401 aacgcgcgcg ataggacgcc caggcgccga tgagcagcaa cgcaccggcc acgtaatctt
     2461 cgaacatcgt tgtgaattcg acggtccagt gattgatgcc tcgacgggct gtctccagca
     2521 ccggcagtaa tgctccgaca ataaacgcgg ctataacttc gaatctcatg atgcgtcggg
     2581 cgtcatttgg cgaccctcaa ctttttcagc aactgaatct gccctgcgtg ataaagatcg
     2641 tgtgacgcta tgccggtaat cagcgcgacg ttactgacct tactgccttt cggcgtcact
     2701 ttgagctgcg catccctcaa tccagccacg gcagcacgca tgctgcggtg cgcttcgacc
     2761 agcagcttca catcgttctt ccaatcagcc tcagttgagt tgccgtccgt cggacgcaca
     2821 aaccagttcg agccctccaa cgaaaatgaa ccgcgcgctt cagagagaat ccggcggcgc
     2881 acgatgtact tccagtaagc ggcgtgcacg acggtttccc agatgttgtg acggccaggc
     2941 gccggccgcc acgtcacgtc atcaacgcgc aatccgcgaa tggagccgcg caggtttgtg
     3001 ccgtgccacg cccgatgatc gaacgcctgg tcgatcaaag ccagcagcaa agaaatttga
     3061 gggttggaca ccgtgttcat cctgggctac tgcgagacat catcgtcctg taatggatga
     3121 tgtttcgacg aaagattttc gcgcccccat ttcaacgcac ggctcatcca gacaagctca
     3181 tccagaaaat ctttggctct tttctcgtat gcagaatcca gtaagacgcc gttctgatcg
     3241 aacttctctt gcaccttcgg gaaattgaga tccgcaaacg tcactgacag acccagctcg
     3301 cgcaccaccg gcaccagcga ctcgacaacg cgcgttcctc cgaaagtccc acccgagacg
     3361 ccaacaagag caacggcttt gtggatgtat tctttcagaa gcagatcgag cacgctcttt
     3421 aaggcaccgg gatagccgtg attgtattcc ggcgtgacaa tcaccagtcc atcggcccgg
     3481 atgatggcgt ctcgccattc aggaaaagca tccttgattc cggttccgta gtcgtcttgc
     3541 ggcagcgcaa aatccttcac gtcgaaaaga cgcgtctcga tctcggcccg tttttgcatc
     3601 tcgccgtgca gccactctgc gacgaagaca ctctttctgt ctttacgatt ggtgccgagg
     3661 attagcggca ggaataactt gctgtctatt ttgtccatac gaagctcaac acacgtaaat
     3721 tactcgcccg gatcaaccgg atacggagcg tttaggtcat ggttcggttc gagaatcatc
     3781 tgccggcgag aataatcgat gatcactttg aagcggcgaa aaatctcgcc gccgatcaca
     3841 ccgtcacctt ccttggccgc tccgtcacgt tcgggatcac gtacgagtcc gactgtcgga
     3901 ttggtgaaaa cgaatcgccc cacttgggcg gccttggctc gcccgaccac aatttgctgc
     3961 tcgccgcccg cgccacgccc ggcgctctct ttgatattgg tcatcgccgc aaccaatccg
     4021 tgtttcttga cgaatggatt gttaaagatg aacgcgcggt ccgcgcccgt gtccactccc
     4081 agaaccgcgt tcagttgcgc gcctgccggc ggaatgatcg tgacatgcac caggggaatt
     4141 ctgcgatcgt ccagcacgag gggaatgact tcgccgcggc ctctgtacga gtaagttcga
     4201 gggtcgtaca gattcatgat cttcttcagg taatcgatct caaccacaaa cgcattgatg
     4261 aagtcataac cgatcacgcc gtcaaattcg aaacccggtg gcaccggaaa atcgatcatc
     4321 ccaatttgct ggtttgagac ttcggcgccg acaaccttta acgaaacgcc cgaggtaagg
     4381 ctgccttcaa tggctccacc ggtcgcggtg ccgctaactt gttcctccgg cttcaatccc
     4441 aattcggacc cgcgccgtga atgaaggatc gtgtgcgacg cgccggtgtc gaagatgaac
     4501 ctaaggggct ttgagttatt cacgcccacc tgcatcagaa tgatgttgtt atcgatctca
     4561 agtgggatgt tcaaagcgct gttgccggaa gtgaagcgcg cgtttgaccc aacctgccgc
     4621 tgccgcgttg caggaatttg tttcgattcc tgagcggaaa gctgtaaggg gaaagccaca
     4681 gccaacagga gagcgagtgt gcaagtgcgc gaactcaagg gatatctcac ggctcaatcc
     4741 tgccatatcg attcagattt actaagccga atgagagaag tccacggagc gggaggcagc
     4801 gtagagactg gagcttacgc cccaggatcg gatcgcctac gacttcgcga gcccacggag
     4861 cgggcgacgt ccgttgatac agcaccgcga gcggtagcaa gcgggataaa aactcatcag
     4921 tcccaatcgt cggaagttcc gatcccgaag aagttgacgc ctggtcccgc tcgctactgc
     4981 tcgcggttct gtaaaggctg tcgctcgctc cgctgcttta ccgcatttct ttgtttccca
     5041 cctggggctt acgccccagg cttgctgaca ccgctccgcg ggttcactca cttttcactt
     5101 ttcgctcgcc tcgtgagcta tctcttgaac tctttccgat acacgttgaa atttctggta
     5161 acccggccgc cgagcttctc tgctgtcttt cgtgaaggcc agttttcatc catcacaacg
     5221 gtgtagcttg cggtcttgta gccgcgttca atcatggcga gataactttt agcggccagc
     5281 gccaaattca ccccacgccc gcgatactct ttcttcacgc cgataatcag gagaacgccg
     5341 tgatccacac tcgcgaggtg ctgctggaac tcggtgaggt tttcttcgat gctccggcct
     5401 ctcatcgaat gaagcgcctg gttcaggtcc gggagcgaat aaacggcccc ggctatttgt
     5461 ccgtcagcct cagcgaagac catgaagtca gcaaccaaca aatctttaag ttccaccgtc
     5521 aggccacgca tgacctctgt cggtagaggc atgaatccga agtgagcact gaaggcctcg
     5581 ttgaagatat tcgttaaggc ttcgttctcc tgttccagcc gttcgaagtc acaggagcga
     5641 agtgagattc ccgaactggt ggcacgctca accatgtcgc gatagctttg gaccagttcg
     5701 cgagtgaatt gaatctgata ttgaacgacg cccgtctcag taacgaagcc gccgtttttg
     5761 atgtaactgt ggtagtacgc gggattaaag gtatggaaga tagtcggcac ttcgtcgtag
     5821 gcgtcgatgg tgattggcaa ctgcattccc ggcaacatcg agagtcgcac cgcttcgcag
     5881 cctgtcgttt tgagccagtc acacgccgcg ctcagaagcg actcgacggc ttcattctga
     5941 tcagccagcg cttcgaagaa aagcagatgg cccatctttt cgttccagtg ccggtcgtaa
     6001 accgggctcg ttaccgccgt gaccgttgcc aacacacgtc cgccgtcctc aacccagaaa
     6061 ggctgaatct tcaactcgga accgaaaccg ccctgacctg agagcaactt tgtcagatga
     6121 tgagcatctg gcgggaccca gtgcgggttc tcgcgataga cgtcctcggt gaagtcaaca
     6181 taacgctgaa agtcttcggg cgtgctcagt gacctgacat tcatgcgtgg caatcctcca
     6241 ttgatctact taattcatcg cggttcggta tgcaacaaca caagtgagga tgcccatagc
     6301 aaacgcgtag accagcgccc atttcaacgg aatcacatcc ttttccgtgc cgacacccgg
     6361 atcggttcgc ttgtagacgc cccaaaccag gacgggatac agcactaggc cataaaacaa
     6421 agctcctccg attagacctt gtgctcgttg gtggctgtcc attcgttgtt cgcgcgcaag
     6481 aaaaacgtcc atccgaagct gtgcggcctc aaccttgagc ttggcggcgt cggaaaactt
     6541 gtcctcgcga ggctgctctt ttttttcgcg atctttggct tccatcgcat cttcgggaga
     6601 agctttggct tctgcaaccc gccgggtaat cctgtcattc gactctcgtg cttccgattc
     6661 caattgatca gctcgttcaa attgggcgtt ttccagctct tcgaaagcct tatgcagttt
     6721 tcctttcgaa tctacaacgt cctgtcttgt atctgaccga aactcaaaca agccactttg
     6781 atttattgag tagcccacca cgatcaaata gacaaacgtt ccccaaccca acaccttaaa
     6841 gatcatttca cgcctaagct tttcatccac ctgaagttac ctccccggct gaacggacaa
     6901 aatatgttac ggatcactcg cgaaaggcag tcgaagtcaa taccgccaac tcttcaagtc
     6961 cgctcccggc ggtgcggtct ttaacatgcg ctcaacggcg cgcggcatga acatttggtg
     7021 atagcgcaga cgcgagagtg cgttgggacg ggtgtgatct ccgttccaac agtgctcggc
     7081 gcgcggttcg taatcgactt caccgccgta ggccggatct ttcgtcgtct tcagaaagtc
     7141 ttcgaccaaa tacacagcgt tgttcagata atagttgtct gcttcgccga cgtagatgtg
     7201 aagtttcccg gcgagcttcg gcccaagctt ctgccaatct cttttcaaga tgtaaccaag
     7261 atcgtaatgc tcgcgccagt actcagctac tgaccggtca atctctccgg tcagtttgtt
     7321 ccagataggt ttgggataac cgtcggcgcc tacgggcgaa tagacagctt cccagatgtc
     7381 gaactgcccg cctgaacggc tcttcgtgcc gagggccagc tccatgtgat tcatgtcttc
     7441 gatcgtgcct gccagctcac ccagatagtt tcgcttgccc gggcgcggcg ttttcttcca
     7501 cgaatcgtcg atgtagtaag cgttcttatg gcggtagata tccacgacca tgtaggcgcg
     7561 aaaatcgatc gggtcgggac acgcgatata cgcgccgttg tattcgtcag gatagaaaac
     7621 ctgcgcggcc atcgcttccc agccgccggt cgagccgccg tacatgaaac gcgcccagcc
     7681 tttaccgatc ccgcgaaact tttcttcgat gtaaggaatc aactcataag tgatcgcgtc
     7741 gccgtatggc cccaggttcg ccgagttcac cgcgtaggaa tcgtcgtagt aaggattcgc
     7801 gtgctgaatc tcgatcatca gcatgcgcgg aaagttcggc cccgtccatt ctttgtaaaa
     7861 ctgatgagcg tgttcctgaa cgatgcggtt gtagccttcg agtttgaagc gctcgctgta
     7921 gtcgggtttc agatttggat cgggcggcgt ctcgcgaaag ccgccgatgt tcgccggga
//
LOCUS       DATDBY010000546         4310 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2912208, whole genome shotgun sequence.
ACCESSION   DATDBY010000546 DATDBY010000000
VERSION     DATDBY010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4310
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2912208"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(194..1063)
                     /locus_tag="VIT19_10230"
     CDS             complement(194..1063)
                     /locus_tag="VIT19_10230"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEY5839400.1"
                     /translation="MARTVKCGLIQAHNAGPTDAPIEEIIRLNVEKHVAMIEDAAKQG
                     VQILCMQEVFTTPYFCAEQQTRWYEAVEKIPDGPTTKLMQEIARKHNMVIVVPIYEEE
                     ITGIYYNTAAVIDADGKYLGKYRKNHIPHVNPGFWEKFYFRPGNLGYPAFDTAYARIG
                     VYICYDRHFPEGARALGLNGAEIVFNPSATVAGLSEYLWKLEQPAHAVANGYFVGAIN
                     RVGHEQPWDIGEFYGQSYFCDPRGQIIAQAPRDEDAIVVADLDLDLIREVRNTWQFFR
                     DRRPDSYGQLVAD"
     gene            complement(1128..2825)
                     /locus_tag="VIT19_10235"
     CDS             complement(1128..2825)
                     /locus_tag="VIT19_10235"
                     /inference="COORDINATES: protein motif:HMM:TIGR00800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS1 family nucleobase:cation symporter-1"
                     /protein_id="HEY5839401.1"
                     /translation="MAAESTTSDTALKQHEFEELRKDVSHSPIWNKDLAPTSIKSRTW
                     STWNIAALWIGMSVVITTYMLGGSFIQQGMNWWQAMATILLGNTIVLIPMILNAHAGT
                     KYGVSFPVLCRASFGTKGANIPALLRAIVACGWFGIQTWIGGAALDALITAMWPGWSS
                     VLGGSVLNVALHTWFAFFAFWLIQVLIILRGIEGIKHLETWAAPLLLAGGLVLLIWAS
                     SRAGGLGRVLTESSALQRQQANFWNIFPGALTASVGYWATLSLNIPDFTRYARSQKSQ
                     MLGQALGLPLTMTAFAFIGVAVTSATVLIYGVAIPDPVALVTRFESALVIVFAMLVIF
                     AAQLTTNMAANVVSPSNDFSNLNPRLISYVTGGLITALIGIVIMPWKLMASMGAYIFT
                     WLIGYSGLMGAIGGIMICDYWILRDRKLDLAGLFDVDGPYSYSRGPTIGLLLYLAGFG
                     ALVTLELIFLFSPSLNAGLWFHVLVAMLALVLLVFAARALRKPLEKGWNWYAMIALFF
                     AVAPVVPGFVRAATTPGGQIPNPTFFDTMYTYAWFVTFGLGFVIYYILMSSRVRVRR"
     gene            complement(2846..3571)
                     /locus_tag="VIT19_10240"
     CDS             complement(2846..3571)
                     /locus_tag="VIT19_10240"
                     /inference="COORDINATES: protein motif:HMM:NF016300.4"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEY5839402.1"
                     /translation="MKTIFLLVTLAVAAVPAFAQNNIEPPLITVTGQAEVRVPPDEVL
                     FTLAVENVDKDMLVANRKTDDSVKQILAIARKYNVKPEDVQTSQISVQPKYNTDDMEY
                     EARRNVKRVLIGYQVSKTVAVRLRDISRFDEMLADILKAGITRLSNLEFRDSQIRKHR
                     DEARRMAIRAAQEKARLLAGEIGQSIGPAYSITETSGNDYGRSNAMQNVAGVAGDSAA
                     GDSAIAPGSISVTAQVTVRFRLQ"
     gene            complement(3594..>4310)
                     /locus_tag="VIT19_10245"
     CDS             complement(3594..>4310)
                     /locus_tag="VIT19_10245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839403.1"
                     /translation="SDLQSRPLTEVVAEVEDWSLNQYMVALARGDRMSPQQRQEIAAR
                     LSRYTGLGQSFFENANLRVNLNLFRKELLRSERRSIGRLDSRFKGYDSNYSTDSPEYD
                     ASEAVIRSPYTATMNNYVRRDLGYKTDLEYYILGGGFTSPWNWGTNNNYVDTSVALRN
                     ALAKNPYLKIFVACGYYDMATPFSAAEYTIHHISIDPSLLRNFSTGYYEAGHMMYIDE
                     KSHAKLRADITKFIDDSLRR"
BASE COUNT          987 a         1218 c         1164 g          941 t
ORIGIN      
        1 ccgtaggcat catcaacggc aacgagttca ccttcgtcgt cgattgccgt agtgccggtg
       61 acgtagattc gattgccaac tttaaccgcg cgtgaatagc cgacgatgga ttcccatttc
      121 gcgccggaag agattcgctc acgtggagtc atgctttgcg ccctccctga cggtcgggct
      181 actgccccga cgatcaatca gccaccaatt gtccgtacga atccggccgc cggtcacgga
      241 agaactgcca ggtgttgcgg acttcacgaa tcaggtcgag gtccaaatct gcgacgacga
      301 tcgcgtcttc atcgcgcggc gcttgcgcga tgatttgccc gcgcggatcg cagaagtaac
      361 tctggccata aaactcgccg atgtcccagg gctgttcgtg tcccacgcga ttgattgcgc
      421 caacgaaata cccgttcgcg acggcatgcg ccggctgttc cagcttccaa agatattccg
      481 acaagcccgc cacggttgcc gaaggattga agacaatctc ggcgccgttc aatcccaacg
      541 cgcgcgcacc ctcggggaaa tgccggtcgt agcagatgta aacgccaatg cgggcgtagg
      601 ccgtgtcgaa tgccggatag ccgagattac ccgggcggaa atagaacttt tcccagaagc
      661 cagggttcac gtgcgggatg tgattcttgc ggtacttgcc caggtacttg ccgtcagcat
      721 caatcaccgc ggccgtgttg tagtagatgc cggtaatctc ttcctcgtaa atcgggacga
      781 cgatcaccat gttgtgcttg cgggcgattt cctgcatcag cttggtggtc ggcccgtccg
      841 gaattttctc caccgcctcg taccagcgtg tttgttgctc ggcacaaaag tacggcgtcg
      901 tgaagacttc ctgcatgcaa agaatctgca cgccctgctt cgcggcgtct tcgatcattg
      961 cgacatgctt ttcgacgttg agccgtatga tctcttcaat cggcgcatcg gtcggccctg
     1021 cattgtgtgc ctgaatcaat ccgcatttta ctgttcttgc catgtccgct ccctagttag
     1081 aacttttaat gaaatcgcaa tatacccgtt gagtgattta atctgcgtta gcgacgaact
     1141 cgaactcggc tgctcatcaa aatgtagtat atgacgaacc caaggccgaa cgttacgaac
     1201 cacgcatatg tgtacatcgt gtcgaaaaac gtagggttcg ggatctgtcc accgggcgtg
     1261 gtggctgcgc gaacaaaccc tgggaccaca ggcgccacgg caaaaaacaa cgcgatcatc
     1321 gcataccagt tccaaccttt ttccagcggt ttccttaacg cacgcgcagc gaaaacgagc
     1381 aagaccagag ccagcattgc tacgagtacg tgaaaccaca ggcctgcgtt tagacttggt
     1441 gaaaatagaa agatcaattc aagtgtaacc agtgcgccga agcccgcgag ataaagaagt
     1501 aatccgattg tcggcccgcg agaatacgaa tacggcccat cgacatcaaa caagcctgcc
     1561 aaatcgagct ttcgatccct tagaatccag taatcgcaaa tcattatgcc gccgatcgcc
     1621 cccatcaagc ccgagtaacc gatgagccac gtaaaaatgt aggcgcccat cgaagccatt
     1681 aacttccagg gcatgatgac aattccgatg agcgcggtta taaggccacc ggtaacgtag
     1741 gaaatcagtc tcgggttaag gtttgaaaaa tcattcgacg gcgacacaac attcgcggcc
     1801 atgtttgtcg tgagctgagc ggcaaatatt accagcatcg cgaagacgat caccaacgcg
     1861 ctttcaaacc gagtcaccaa agccaccgga tcagggatcg cgactccgta aatgagcacc
     1921 gtggcactgg tgaccgccac gccgataaaa gcaaatgccg tcattgttag cggcaggcca
     1981 agcgcttgtc ccaacatctg ggacttctgc gagcgggcgt accgggtaaa gtcgggtatg
     2041 ttgaggctca acgtcgccca ataacccacc gatgcagtca gggctccggg aaaaatattc
     2101 cagaaatttg cctgctgtct ctgcagcgct gacgactcgg ttaagacgcg ccccaggccg
     2161 ccggcgcgcg atgatgccca gatcaaaaga actaatcctc cagccagaag caaaggcgcc
     2221 gcccacgttt cgaggtgttt aattccctcg atacctcgca agatgatcag cacttgaatc
     2281 aaccagaaag cgaagaaggc aaaccacgtg tgcagcgcaa cattcaaaac gcttccgccg
     2341 agtacgctcg accagccggg ccacattgcc gtgattaagg cgtccagtgc ggcgccaccg
     2401 atccacgtct gaatgccgaa ccaaccgcag gcgacaatcg ctcgcaagag cgctgggatg
     2461 ttcgcgccct ttgttccgaa agaagcgcgg caaagcacgg ggaacgaaac gccatacttc
     2521 gtacccgcgt gcgcgttgag gatcatcgga atcaagacga tggtattccc caacagaatc
     2581 gttgccatcg cttgccacca attcatgcct tgttgaataa aactcccgcc cagcatgtaa
     2641 gtggtgatga ccacactcat gccaatccag agcgcggcga tattccaggt tgaccaggtg
     2701 cgagatttga tcgaagtggg ggccaggtct ttgttccaaa ttggactgtg ggaaacgtct
     2761 ttacggagtt cctcaaactc gtgttgctta agagcagtgt cggatgtggt tgattcagca
     2821 gccatgatgg tttagcgtcg cgcggtcatt gaaggcggaa ccggacggtc acttgcgccg
     2881 tgacggagat acttcccggc gcgatcgcgg aatcgccggc ggcagagtcc ccggcaacgc
     2941 cagcgacgtt ttgcatggcg ttgctgcggc catagtcgtt acccgatgtt tcggtaatcg
     3001 aataggccgg cccaatcgat tgaccaatct cgccggctag aagtcgggcc ttctcctgcg
     3061 ccgcgcgaat ggccatccgc cgcgcttcgt cgcgatgttt ccgaatctgc gaatcacgga
     3121 actcgaggtt gctaagccga gtaatgccgg ctttcagaat gtccgcgagc atttcatcaa
     3181 accgtgagat gtcgcgaagg cggacggcca cggttttcga cacctggtaa ccgatgagca
     3241 cgcgcttgac gttgcgccgc gcctcgtact ccatgtcgtc ggtgttgtat ttcggctgga
     3301 cgctgatttg gctggtctgc acgtcctcgg gtttgacgtt gtacttgcgg gcaatcgcaa
     3361 ggatttgctt cacgctgtca tcggttttcc ggttcgcgac gagcatgtcc ttatcgacat
     3421 tctcaaccgc gagcgtgaag aggacttcat ccggcggcac ccgcacttcg gcctggccgg
     3481 tgacggtaat cagcggtggc tcgatgttgt tttgggcgaa tgcgggaaca gcagcgaccg
     3541 ccaaagtaac taacagaaaa attgttttca taattgagcc tgacttcccg cggctatctc
     3601 cgcagcgaat cgtcgatgaa ctttgtgatg tcggcgcgca gcttcgcgtg cgacttctca
     3661 tcgatgtaca tcatgtgacc ggcttcgtaa tagccggttg agaaatttcg cagcagcgat
     3721 ggatcgatgc tgatgtgatg aatggtgtat tcggccgcag agaacggcgt cgccatatcg
     3781 tagtagccgc acgccacgaa aatcttcaga taaggattct tcgccagcgc attccgcaat
     3841 gccacgctcg tatcgacgta gttgttgttc gtgccccagt tccagggact ggtgaagccg
     3901 ccgcccagaa tgtagtactc gagatccgtt ttgtatccga gatcccgccg cacgtagttg
     3961 ttcatggtcg cggtgtaagg cgagcgaatt accgcttcac ttgcgtcgta ctcaggacta
     4021 tccgttgagt aattggaatc gtaacccttg aatctactgt ccagacgtcc gatcgatcgg
     4081 cgctcggacc ggagcagttc tttccggaac agattcaggt tgacgcgcag attcgcattc
     4141 tcaaaaaagc tctggccgag accggtgtag cgagacagac gcgcggcgat ctcctgccgt
     4201 tgttgcggcg acatgcgatc gccacgcgcc aaagccacca tgtattgatt taaggaccag
     4261 tcttcaactt ccgcgacaac ttccgtcaac ggtcttgact gaagatcaga
//
LOCUS       DATDBY010000547         5232 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2306603, whole genome shotgun sequence.
ACCESSION   DATDBY010000547 DATDBY010000000
VERSION     DATDBY010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5232
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2306603"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            94..1329
                     /locus_tag="VIT19_10250"
     CDS             94..1329
                     /locus_tag="VIT19_10250"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEY5839404.1"
                     /translation="MAEFVCRLGTPAGEIVTRTIEASAVPEARARLEREGFKVFNITP
                     PKVEGVTSFTRVTGGSGRAKVKANDFLLFNQQLAALLRAGIPILQAISMLRRRATSVR
                     LRGVLEAVEDAIRGGAALSQAFAAQGAIFPRIYTASILAGERSGALDEVLSRYVTYMR
                     RSVALRRKIRGALAYPMFLLTASLGMVVFLTLYVVPSMSELFAGFGGELPLVTRIVMA
                     LSGAVTRNIFWLAPLFIVSAVGLGIWSRTPGGRLTIDRLKLKIPIAGKLLVQLSVAQA
                     ARSLATLLAGGITLVESWEIAAESITNLELRRRSSAILPMIREGQSFTESLESAGWLP
                     ALAIDMIGIGERSGSLREMLDEVATFYDAEGEVKLEQLTTTLEPAILVVMGGLVVVIL
                     LAIYLPIIESISGGPMIKR"
     gene            1401..3122
                     /locus_tag="VIT19_10255"
     CDS             1401..3122
                     /locus_tag="VIT19_10255"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspE/PulE family protein"
                     /protein_id="HEY5839405.1"
                     /translation="MKQFSEEQTDKTVTDPGQSNGGAPADEDLPQVIEPPEVRQAKDL
                     ARRYRLPFVNLLPQDGESPIDYALLSEIPVDLMVRNQFVPLRRENGKLHIAMADPTDL
                     DRLDDLAGALQTRLVPHVATAGAIDVVLRKGDATQRVLQEAASGFRISLVRETETGEE
                     VLDLDRLATDSEMSPIIKLVDTVIYNAMESRASDIHIETRDTEVQVKYRIDGALYQKV
                     DPIDLAYHQTLISRIKVMSELDIAERRVPQDGRFRVRYKGRNVDFRVSIMPTVHGEDA
                     VIRILDKEQINESFKNLDLDVVGFDPEDLRKFRRYIAEPYGMVLVTGPTGSGKTTTLY
                     AALNEIRNEEDKIITIEDPVEYQLHGITQIPVNEKKGLTFARGLRSILRHDPDKIMVG
                     EIRDEETAQIAIQSALTGHLVFTTVHANNVIDVIGRFLNMGVEPYNFVSSLNCVLAQR
                     LVRILCTICKRPHHPSDTELIESGLQPEEHRDRVFYVNTGCESCNHTGYRGRTAIHEL
                     LDLSDNIREMIVERRPGSEVRRAAEAEGLTSLRESALKKIFTGVSTLHEINRVTFVEE
                     VNVNTQR"
     gene            3316..>5232
                     /locus_tag="VIT19_10260"
     CDS             3316..>5232
                     /locus_tag="VIT19_10260"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretin N-terminal domain-containing protein"
                     /protein_id="HEY5839406.1"
                     /translation="MKTQTRNPIVSLVVVLCLLVVPLTAFAKKGRDHFKRGLKHEQAQ
                     QWDKAAQEYTLALASDPSNAEFQLHYRRAIFNASQMFMQQGRAMAEQRDYIGAYNAFR
                     QAFGYDPVNQLAVSEMERMLRLQEVKEGGAVKANPTSTEGTGGTPAGASKPGEEPLPQ
                     STRPEQLRQGNFNGDLKHYIRTLAEQLGLNVVFDKQSFAQPRNLDMVLTQPVTTAKAL
                     DYIFLQESLFFQKLDRHTILVAEQARRPQYQQLVVRTFFISNADPEKVKTLIGQALPA
                     SVGRPSMIVVADKDTNSLTVRDTAENVRLIGELIQSIDKDRAEVVMDVDIYEVSQADL
                     LTFGNQIGQGTGAFNLGGSPGISILSSAGAVNNSQPGVNLSSVVGQVPTALAAALVIP
                     PAVFSAFQSKDNTKLIASTQVHAFNGEESKARIGQRVPVQTAQAYPFGVQTGTPQPGQ
                     GAFPTGGFPVINYEPTGLTLTFTPQVFPNLDVQVKMNIESKDVLGGDTLTPTFTERTI
                     TGTARVQNNRTMLLASVSQDVETKGRRGIAFLGGLPFVGRLFTSPTRSNRRIDIVIAV
                     TPRVLRAPALTPRDEEMRPSGTLQSPTTGSLEAMLRENYREEQILAARRIPKEVNVQL
                     PDAPAYVPAASTETP"
BASE COUNT         1144 a         1490 c         1520 g         1078 t
ORIGIN      
        1 gatttccgaa acaattcgtc ccgtcgcgcg ttcttgaaca cgctgagtca ttcactgacg
       61 cactcaaaat gaacctgata tactccgacc gcaatggctg aatttgtctg tcgtttggga
      121 actcccgcgg gcgagatcgt cacccgcacg atcgaagcgt cggcagtgcc tgaagcacgc
      181 gcgcggctcg agcgcgaagg cttcaaagtt ttcaacatca ctcctccgaa agtcgagggc
      241 gtgacctcgt ttacgagagt cactggcggc agcggtcgcg cgaaggttaa ggccaacgac
      301 tttctgcttt tcaatcagca actcgcggcg ctgttgcgcg ccggcattcc tattctccag
      361 gcgatttcca tgttgcgacg ccgcgctact tcggtgcggc tgcgcggcgt tcttgaagct
      421 gtcgaagacg caattcgcgg cggcgcggcg ctgtcgcaag cattcgcagc gcaaggcgca
      481 atcttcccgc gcatctatac cgcgtcgatt cttgcgggcg aacgatcggg tgcgttagac
      541 gaagttttgt cgcggtacgt cacctatatg cgacggtcgg tcgcactgcg gcgaaagatt
      601 cgcggcgcgc tggcctatcc gatgtttttg ctgaccgcgt cgctcggcat ggttgtgttt
      661 ctcacgcttt acgtagtgcc aagcatgtct gaactgttcg caggttttgg cggcgagttg
      721 ccgctcgtga cccggatcgt gatggcgctg tcaggcgcgg tcacgagaaa tattttctgg
      781 ctggcgccac tttttatcgt cagcgctgtc ggtctcggca tctggtcgcg tacgcccggc
      841 ggacgattga cgatcgatcg gctgaagttg aaaatcccca tcgcggggaa gctgctggtg
      901 caattgtccg tggcgcaggc cgcgcgatcg ctcgcgaccc ttctcgccgg tggcatcacg
      961 ctggttgagt catgggagat cgcggctgaa tcgatcacaa acctggaatt gcggcggcgc
     1021 agctcggcga ttttgccgat gattcgcgaa ggtcagtcgt tcacggaaag cctggaatca
     1081 gccggatggc tgcccgctct ggcgatcgac atgatcggaa tcggcgaacg atcgggcagc
     1141 ttgcgcgaaa tgctcgatga ggtcgcaacc ttctatgacg ccgaaggcga agtgaaatta
     1201 gagcagttga cgaccactct tgagcctgcg atccttgtcg tgatgggcgg cctcgtagtg
     1261 gtgattctgt tagcgatcta tctcccgatc atcgaatcga tctccggcgg cccgatgata
     1321 aagcggtaag tagcgtaagt tgttaaattg cgggtccatc tcgaagaaga gcgcaagttg
     1381 ttaacttgcg atatagcgta atgaagcagt tttctgaaga acagaccgac aagaccgtca
     1441 cggaccccgg gcaaagcaac gggggtgcgc cggccgacga agaccttccg caagtcattg
     1501 aaccgccgga agtgcgccag gcaaaagacc tcgcgcgccg ctatcgcctg cccttcgtaa
     1561 atttgctgcc gcaggacggc gagtctccaa tcgactatgc ccttttgagc gaaatccccg
     1621 tcgatctgat ggtgcgcaat cagtttgtgc cgctgcggcg cgagaacgga aagctacaca
     1681 tcgcgatggc cgatccgacg gatttggatc ggctggatga tctcgccgga gcgctgcaaa
     1741 cacggctggt tccacacgtc gcgaccgcgg gcgcgatcga cgtggtgctg cgcaaaggcg
     1801 atgcgaccca gcgcgtcctg caggaggccg cctcaggttt tcgaatttcg ctggtgcgcg
     1861 aaactgagac gggtgaagag gttctggatc tcgatcggct cgcaaccgac agcgagatgt
     1921 cgccgatcat caagctggtc gatacggtta tctacaacgc gatggaatcg cgcgcctcgg
     1981 acattcacat cgaaacccgc gacaccgaag tgcaggtcaa gtaccgcatc gacggcgcgc
     2041 tttatcaaaa agtcgatccc atcgatctcg cctatcacca aacattgatc tcgcgtatta
     2101 aggtcatgtc ggaactcgac atcgccgaac gtcgcgtgcc gcaggacggc cgcttccgcg
     2161 ttcgctacaa aggccggaac gtggacttcc gcgtgtcgat tatgccgacc gtgcacggcg
     2221 aagacgcggt cattcgtatt ctggacaagg aacagatcaa cgagtcattt aagaatctcg
     2281 atctcgatgt cgtgggtttt gatccggaag atttgcggaa gttccggcgc tacattgctg
     2341 agccgtacgg catggtgctg gtgactgggc cgaccggttc gggtaaaacg acgacactgt
     2401 acgcggcgct caacgaaatc cgcaatgaag aagacaagat catcaccatc gaggatccgg
     2461 tcgagtatca gctgcacggc atcacgcaga ttccggtgaa cgaaaagaag ggtctgacgt
     2521 tcgcgcgcgg cttgcgatcg attctgcgtc acgatccgga caagatcatg gtcggtgaaa
     2581 tccgcgacga agagacggcg caaatcgcca ttcagtctgc gctgaccggc cacctggttt
     2641 tcacgacggt ccacgcgaac aacgtaatcg acgtcatcgg ccgttttctg aacatgggcg
     2701 tcgagcctta caacttcgtc tcgtccctca actgtgttct ggcgcagcgg ttggtgcgca
     2761 tcctgtgcac gatctgcaag cgcccccatc acccttcgga cactgagttg atcgaatcgg
     2821 gcctgcaacc ggaagagcat cgcgatcgag tgttctatgt gaatacggga tgcgaaagct
     2881 gcaatcacac cggttatcgt ggccgcacgg cgattcacga gctgctggat ttgagcgaca
     2941 acatccgtga gatgatcgtt gaacgtcgtc cgggctcaga agtccgtcgc gcggcagagg
     3001 ccgaaggcct taccagcctg cgtgaatcgg ccctgaaaaa aatctttacg ggtgtttcca
     3061 cgcttcacga aatcaatcgc gtgacgttcg tcgaagaggt gaatgtgaac acacagcgat
     3121 agaaactctc ccggtaataa ttgccaaaat agaacttgtt cgactctcca tcccttaaaa
     3181 agcttcggtt tttctgctaa actgcgctag tttttgctca ttgaggaacc gactatccgc
     3241 ggctcgcgtg taacgagcag tgaaccggcg cttaccggca tcaaacggaa gcccaacgcc
     3301 cgagaggtaa tcattatgaa aacgcaaacc cgtaatccga tcgtttccct tgttgtcgtc
     3361 ttatgcctgc tggttgtgcc gttgacggca tttgccaaga agggccggga ccacttcaaa
     3421 cgcggcctga aacacgagca agcgcagcaa tgggacaaag cggcgcagga atacacgctc
     3481 gcactggcgt ccgatccgtc gaacgcggag tttcagcttc attatcggcg tgcgatcttc
     3541 aatgcgtcgc agatgttcat gcagcaggga cgcgcgatgg ccgagcagcg agactacatc
     3601 ggagcttaca acgcgtttcg ccaggcgttt ggttacgacc cggtaaatca attagctgtg
     3661 tctgagatgg agcgcatgct gcgtcttcag gaggtaaaag aaggcggcgc ggtcaaggct
     3721 aatccaacgt cgaccgaggg aaccggcggc acgccggccg gagcttcaaa gccgggcgaa
     3781 gagccattgc cgcaatcgac gcggccggaa cagctgagac agggaaactt caacggcgat
     3841 cttaagcatt acattcgcac gctcgccgag cagttgggcc tgaacgtcgt tttcgacaag
     3901 caatctttcg cgcaaccgcg caacctcgac atggtcctga cccaacccgt cacgactgcc
     3961 aaagccctcg attacatctt tctgcaggag agtttgtttt tccaaaagct cgatcggcac
     4021 acgatcctcg tcgctgagca ggcgcgacgg ccgcagtatc agcagttagt tgtgcgcacc
     4081 ttctttatct cgaacgccga tccggaaaag gtgaagacgc ttatcggaca ggcgttaccg
     4141 gcttcggtgg gacgaccttc gatgatcgtc gtcgccgaca aggacacgaa cagtttgacc
     4201 gtccgcgaca ctgctgaaaa tgtgaggctg attggcgaac tcattcagag tatcgacaaa
     4261 gatcgcgctg aagtcgtcat ggacgtggac atctatgaag tttcacaggc cgacctgctt
     4321 acgttcggta accagatcgg acagggcacc ggcgctttta accttggcgg gtcacccggc
     4381 atcagcatcc tcagcagtgc cggtgcggtc aacaattctc aaccaggcgt aaatctcagc
     4441 agcgtcgtcg gacaagtacc gaccgcgctg gcggcagctt tggtcattcc gccggctgtc
     4501 ttctcggcat ttcaatcgaa ggacaacacg aaactaatcg cctcgacgca ggtacacgcg
     4561 ttcaacggcg aagaatcaaa agcccgcatc ggacaacgcg tgcccgtgca gacggcgcag
     4621 gcttatcctt tcggcgtcca gaccggcacg cctcagcccg gccagggagc atttccgacg
     4681 ggcggttttc ccgtcatcaa ctatgaaccg acggggctga cgcttacgtt cacgccgcag
     4741 gtgtttccga atctggatgt gcaggtgaag atgaacatcg aatcgaaaga tgtgctcggc
     4801 ggcgataccc tgacgccgac attcaccgaa cgcacgatca ccggcaccgc gcgcgtgcag
     4861 aacaatcgca cgatgctgct ggcgagtgtc tcgcaggatg ttgagacaaa gggacgtcgc
     4921 ggaattgctt tcctcggcgg gctgccgttt gtgggacggc tgttcacttc gccgacgcga
     4981 agcaatcgtc gaattgacat cgttatcgcg gtcacgcccc gagtgcttcg cgctccggcg
     5041 ctgacgccgc gcgacgaaga gatgcgtccc agcggtactt tgcagtcacc aacgacgggc
     5101 tcgctcgaag caatgctgcg cgaaaactat cgcgaggaac agatactcgc ggcgcgccgg
     5161 ataccgaaag aagtgaacgt tcagttgcct gacgcgccag catatgttcc ggccgccagc
     5221 actgaaacac cg
//
LOCUS       DATDBY010000548         2925 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2912621, whole genome shotgun sequence.
ACCESSION   DATDBY010000548 DATDBY010000000
VERSION     DATDBY010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2925
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2912621"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(195..683)
                     /locus_tag="VIT19_10265"
     CDS             complement(195..683)
                     /locus_tag="VIT19_10265"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon monoxide dehydrogenase subunit G"
                     /protein_id="HEY5839407.1"
                     /translation="MKVDATYEIKAPRERVYAALIDPEVLRLVIPGCESLEKVDENHY
                     NATMKAGVGPIKGTFTGEVRLEDMRPPEHYRIVVQGKGGAGFAKGSADFDLEEKDGGT
                     LIRYSGEMQIGGTIAGVGQRMIQGAAKMMASQFFAKLEAEVKNRELSPPVPQAISPNQ
                     ED"
     gene            complement(776..>2925)
                     /locus_tag="VIT19_10270"
     CDS             complement(776..>2925)
                     /locus_tag="VIT19_10270"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5839408.1"
                     /translation="LLDFGIAKLLAPDVFDNTVDLTAAGANLMTPDYASPEQIRGERV
                     TTASDIYSLGVLLYELLSGHRPFHLKNRPSIEMLRIVSEQEPRAPSDAATMRTDKDEG
                     HTQLVLTVETVAQSRNERPARLQKRLRGDLDNIVLTALRKDPLRRYSSVEEFSADLER
                     HLLGLPVTARPATLGYRLTKFAQRNLTAVVFASVALLALLGGLSISIWQTRAANKERA
                     RAEQRFNEVRKMANTLVSGWDKDIPDSLVSNQVRGRIADISTEYLDSLARETDDPALL
                     KELAKAYTVVGHEYTYQFIYEEKARSSLHKAEAILRRLLSDAPNDVEAKRLLTECLGQ
                     YDGYFGERDRTASLKNRLAIVHLNEEILAAKPDDQRALFDLAGGYALYGLVLKFVGRR
                     EESLDYYRRAAEITKRRIELLERTATTPDDRAKLASTYVALAGDQAGDLKEFESATKN
                     VRRGAEIADALYLENPEHERVLFVAGTAQFELGFVLKKTGDVRGSLEAFRKGLSYTRT
                     FLARWRTGYFIRKEYDCLMEIAEALHELGDSGGALAALRESLELRRKLTEGNQNNFRT
                     YHGHGFHFNAGGKLLTRMNRSDEALRVYREAEQAFQKVLEGEPDQITNRRFLAALYLR
                     MGDAHAGLGVCDFARSQNYGGISGYEYCPPDANQITTNRARLRQAQDYYQKAANLLTE
                     FEAQLIVQYDDKENLRLAREKLATVGENIGRRF"
BASE COUNT          633 a          809 c          792 g          691 t
ORIGIN      
        1 cagatagaag aactttcgct ggtaccaacg ccggcaaccc tcactgcgac gtttgcagaa
       61 ctcacgcggc tcgcgaaaga cctcttcgtg cgtcaccgtc caggcgacgc aggcaatcgg
      121 aatcgccagc agaaacagct cgagaatctg aaagcggagc gcaggcatga cggcagtatc
      181 ccgatgcgtc gggattaatc ttcctggttc ggggaaattg cctggggaac tggaggggat
      241 aactcgcgat ttttaacttc ggcttcgagt ttagcaaaga actgcgaggc catcatcttg
      301 gccgcgcctt gaatcatgcg ctggccgacg ccggcaatcg tgccgcctat ctgcatctcg
      361 cctgagtacc tgatcagcgt gccgccgtct ttctcttcca aatcaaaatc ggctgaacct
      421 ttcgcgaatc ccgcgccgcc tttgccttgc acgacaatgc ggtaatgctc cggcggacgc
      481 atgtcttcca ggcggacttc gccggtgaac gttcctttga tggggccgac gccggctttc
      541 atggtggcgt tgtagtggtt ctcgtcaact ttttcgagtg attcgcagcc ggggatgaca
      601 agacgaagaa cctcggggtc aatgagcgcc gcatagacgc gttcgcgtgg cgctttgatt
      661 tcgtaagtgg cgtcaacctt cacgctggca gtttgaggtt tagcaggcta agtttcaagt
      721 agcccgaaaa cgcttcacgg cgtaagcccg acaggatgga tccgatcttc tcgagtcaaa
      781 atcttcgccc aatgttttcg ccaactgtag cgagtttttc tcgggccaga cgcaaatttt
      841 ccttgtcgtc gtattgcaca attaattgtg cctcaaactc tgtcaagaga ttagcggctt
      901 tttgataata gtcctgggcc tgccgcaggc gcgcgcgatt cgtcgtgatt tgatttgcgt
      961 ccggcgggca gtattcgtaa ccagagatgc caccgtaatt ctgagagcgg gcaaaatcgc
     1021 aaacgccgag cccggcgtga gcgtcgccca tgcgcaaata aagcgcggcg aggaagcggc
     1081 gatttgtgat ttggtccggc tcgccttcca aaaccttttg aaatgcttgt tcggcttcgc
     1141 ggtaaacccg cagtgcctca tcagatcggt tcattcgcgt cagcaatttt ccgcccgcgt
     1201 taaaatgaaa gccgtgtccg tgatatgtcc taaagttgtt ttggtttcct tcagtgagtt
     1261 ttcggcgcaa ctccaaagac tcgcgcaacg ccgccaaagc cccgccgcta tcgcctaatt
     1321 cgtgtaaggc ttcagcgatt tccatcaagc agtcatattc tttgcgaatg aaataaccgg
     1381 tgcgccaacg tgccagaaaa gttcgcgtgt aactcaaccc tttgcgaaaa gcctccagcg
     1441 agccgcgcac gtcgcccgtt tttttcaaaa caaaacccag ctcaaattgc gccgttcctg
     1501 cgacaaataa gacccgctcg tgttctggat tttcgaggta gagcgcgtca gcaatttcgg
     1561 cgcctcgccg cacattcttt gtggcagatt caaattcttt tagatcaccg gcttggtcgc
     1621 cagccagagc aacataagtg cttgctaatt tcgcgcggtc gtcaggtgtt gtcgccgttc
     1681 gttcgagaag ttcgatgcga cgttttgtga tttcggcagc acggcggtag taatccagag
     1741 attcttcgcg tcgccccaca aatttgagga ccaaaccgta gagtgcgtaa ccaccggcta
     1801 aatcaaacag cgcccgttgg tcatccggtt tggcggcgag aatttcttca ttcaggtgca
     1861 cgatcgccaa acgattcttg agcgatgccg tgcggtcacg ctcgccaaaa tatccgtcgt
     1921 attgtcctaa acactccgtc agcaaacgct ttgcttcgac atcgttgggt gcatcggaaa
     1981 gcaaacggcg gagaatagct tcggctttgt gaagactcga acgcgccttt tcttcgtaaa
     2041 tgaattgata agtgtattcg tggccgacga cggtataggc cttggctaat tccttcaaaa
     2101 gcgccggatc gtctgtttcc cgcgccagac tgtcgaggta ttcggtagaa atatcggcga
     2161 ttcgcccgcg tacctggttg gaaaccaacg agtccggaat gtccttgtcc caaccggaaa
     2221 ccagcgtgtt cgccattttt ctaacttcgt tgaagcgctg ctcggcgcgg gcgcgttcct
     2281 tattcgccgc gcgtgtttgc cagatggaga tggaaagacc tccgagcaaa gcaagtaaag
     2341 caacgctcgc gaagaccacc gcagtaaggt ttctttgtgc gaacttagtc agccgataac
     2401 cgagcgtagc cggccgggcc gtgaccggaa gtcccagtaa gtgtctttcc agatcagccg
     2461 agaactcttc caccgagctg tagcgacgca gcggatcttt tcgcagcgcg gtcagcacaa
     2521 tgttgtccag atctccgcgc agacgctttt gcagacgtgc cggcctttcg ttccgcgatt
     2581 gagcaacggt ttcgacggtg aggacaagct gggtgtggcc ctcatctttg tcggttcgca
     2641 tggtcgcggc atccgaaggc gcacgcggct cctgctcgga aacgatccgc agcatttcaa
     2701 tcgagggacg gttcttcagg tgaaacggcc gatgcccgga caatagctcg taaagcaaaa
     2761 caccaaggct gtaaatgtca ctggcggtag tcacgcgctc gccgcgaatc tgttcgggcg
     2821 aagcgtagtc cggcgtcatt aagtttgcgc cggccgccgt cagatcgact gtgttgtcaa
     2881 aaacatcagg cgccagcagt ttggcgatgc caaagtccag caact
//
LOCUS       DATDBY010000549         3116 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_79152, whole genome shotgun sequence.
ACCESSION   DATDBY010000549 DATDBY010000000
VERSION     DATDBY010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3116
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79152"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..800)
                     /locus_tag="VIT19_10275"
     CDS             complement(<1..800)
                     /locus_tag="VIT19_10275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEY5839409.1"
                     /translation="MERARTLGELKEAGYRSVSVKDEMRANLICKLKRREKLFPGIVG
                     YDETVVPQIVNAILSRHNLILLGLRGQAKSRIIRQLTNLLDEQIPIIAGSEVNDDPFQ
                     PISAYGRQTIELHGDATHIAWVSRDARFVEKLATPDVTIADIIGDVDPIKAAKGGHLL
                     SDELTIHYGLLPRANRGIFAINELPDLAGKIQVGLFNIMQEGDVQIKGYPVRLPLDVM
                     LVFSANPEDYTARGKIISPLKDRIGAEITTHYPSEISLGVEITRQEAWT"
     gene            complement(1053..2582)
                     /locus_tag="VIT19_10280"
     CDS             complement(1053..2582)
                     /locus_tag="VIT19_10280"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY5839410.1"
                     /translation="MSPLQPKDAAAVILLRHNTNPDNPEVFWVKRSPKLVFLGGFYAF
                     PGGKAETSDVEAPVANSDDDRDRAAMISCAAREMFEETGVLLARGAETLTVGQRTSVL
                     DDLESGRMSWPELLHHYGLKLEANDFTFVGRWVTPPFAPKRFDTWFFLVNCPPKQEPH
                     VTGDGELESGEWIIAREAYEKWQRNEVLAAPPVLHALKTLAEGLTSNLVERFLSEPEA
                     HRQPTRKIEFQPHYICFPVRTPTKPPATHTNCYLIYTSSEILVIDPGSPYEDEQHALA
                     EAVDELVASGRAVREIVLTHVHPDHVAGVNALNDHLETKYETRVPVAAHQQTAESLKH
                     QFPVDRFIQDDELLTLKGEPAIVLRALHTPGHARGHLCFHDERNGALICGDNVVGFGS
                     VLIDPADGNMSEYLDSLRRMRALPNVTVLLPGHGPAVANPYEKLDEYIRHRLEREANI
                     LNAVREGASTSTEIVARVYTDVSPKALAMAERAVLAHLAKLVADGLVREQPPGHLVPT
                     S"
     gene            complement(2718..>3116)
                     /locus_tag="VIT19_10285"
     CDS             complement(2718..>3116)
                     /locus_tag="VIT19_10285"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY5839411.1"
                     /translation="ADFHCVTRWSRLDNVWTGVSTREIAERAGVKPEAKFALALAYDY
                     GWTTNVPMEYFLKEDSLFAFMHDGAPIPPEHGGPVRLIIPQLYAWKSAKWVKGVRFLA
                     EDQAGFWEEGGYHMRGNPWTAGDGERFRWS"
BASE COUNT          648 a          891 c          893 g          684 t
ORIGIN      
        1 gtccaggctt cctgcctggt aatctcaacg ccgagcgaaa tctcactcgg atagtgcgtc
       61 gtgatttcag ccccgatgcg atccttcaaa ggcgaaatga tcttgccgcg cgcggtgtag
      121 tcttccgggt ttgccgaaaa cacaagcatc acatccagcg gcaggcgcac cggataaccc
      181 ttaatctgga cgtcgccctc ctgcatgatg ttgaagaggc cgacctgaat cttcccggca
      241 agatcgggca gctcattaat cgcaaagatg ccgcgattcg cccgcggcag caggccgtaa
      301 tgaatcgtca actcatcgct gagcaggtga ccgcctttag cggccttgat cggatcgacg
      361 tcaccgatga tatcggcaat cgtgacgtcc ggcgtggcga gcttctcgac aaaacgcgcg
      421 tcgcgactga cccaggcgat atgcgtggcg tcgccgtgca attcgatcgt ctgccgcccg
      481 tacgcgctga tcggttgaaa tgggtcgtcg ttgacttctg aaccggcaat gatcggaatc
      541 tgctcgtcga gcagattggt gagctgacgg atgatgcggc tctttgcctg cccgcgcagc
      601 ccgagaagaa taagattatg ccgcgacagg atcgcgttca cgatttgcgg tacaaccgtc
      661 tcgtcataac caacaatgcc cgggaaaagt ttctcgcgcc gttttagttt gcaaatcagg
      721 ttcgcgcgca tctcgtcttt gaccgaaacg ctgcggtagc cagcttcttt gagttcgcct
      781 aacgtccttg ctcgttccat tgttcggaaa ttgtaagtct ctgccccggc aaaatagaaa
      841 cggtagtgtt tagacgaggg cgttgccctc gtcggtgggg cggttgaaat ctcattaaca
      901 cctcgcttca gcgaggtggt tcgaccgggg atgggaaatg cccagccgtt tcaacggctt
      961 tggttaaacc gctaaagcgg tttcagggac aacatcggaa ctcgctgcca cctcgctgaa
     1021 gcgaggtgtt aattaaatgg ggttcggaag tttcaagacg tggggactag atgcccaggt
     1081 ggctgttctc tcaccaatcc atccgcaacc aacttcgcca aatgcgccag cacggcacgt
     1141 tcagccatcg cgagcgcttt cggcgaaacg tctgtgtaaa cgcgcgccac aatttcggtc
     1201 gaggtggaag cgccttcacg cacggcgttc aggatgtttg cttcgcgttc caggcgatgt
     1261 cggatgtact cgtcgagctt ctcatacgga ttggcaacgg caggtccgtg cccgggaagt
     1321 aaaaccgtca cgttcggcag cgcgcgcatg cgccgcagtg aatcgaggta ctcagacata
     1381 ttgccgtcag ccggatcgat tagcactgaa ccgaagccga cgacgttgtc gccgcaaatc
     1441 agagcgccgt ttcgttcatc atgaaaacaa agatgaccgc gcgcgtgacc gggcgtgtgc
     1501 agggcgcgca ggacgattgc aggttcgcct ttcagcgtca gcaattcgtc gtcttggatg
     1561 aatctgtcga cgggaaattg atgtttcagt gactcagcgg tttgttgatg ggccgcgacg
     1621 ggcacgcgag tttcatattt cgtctccaga tgatcattca gcgcattcac tccggcgaca
     1681 tgatccggat gaacatgcgt cagcactatc tcgcgaacag cccggccgct tgcaaccagt
     1741 tcgtcaacag cttcggccaa cgcgtgctgc tcgtcttcat aaggcgaacc cggatcgatc
     1801 accagaatct cgcttgaagt gtaaatcaga taacagttcg tgtgcgtcgc gggcggctta
     1861 gtcggcgtgc gcactggaaa acaaatgtag tgcggctgaa attcgatttt ccgtgtcggc
     1921 tgccgatgtg cctcgggttc agacagaaat cgctcaacga ggttgctggt caacccttcg
     1981 gctagagtct tcaaagcatg gagcacgggc ggcgccgcaa gaacctcgtt tcgctgccac
     2041 ttctcatacg cttcgcgcgc gatgatccac tcaccgcttt ccagctcgcc gtcgccagtc
     2101 acatgcggct cctgctttgg tgggcagtta acgagaaaga accatgtgtc gaaccgtttc
     2161 ggcgcaaacg gcggcgtcac ccaacggccg acaaaggtga agtcgttcgc ttccaatttc
     2221 aggccgtaat gatggagcag ttccggccac gacatccgtc cagattcgag atcatccaac
     2281 acagaagttc gctgcccgac ggtcagcgtt tcggcaccgc gcgccagcag cacgcctgtc
     2341 tcttcaaaca tctcgcgcgc cgcgcaactg atcattgcgg cccggtctcg atcgtcgtcg
     2401 ctgtttgcga ccggcgcttc gacatcggag gtttcagctt ttccaccagg aaacgcatag
     2461 aacccgccga ggaagacaag cttcgggcta cgcttgaccc agaagacttc gggattatcc
     2521 ggattagtgt tgtggcggag gagaatgaca gcggcggcgt ctttgggttg aagaggagac
     2581 atatgtggag atcagattgg gggtttcgca ttcaacgcgg atcagctcgt ggtcgggaag
     2641 agcggcttgc cgccgcttgc tgattaggcg ggggcaagcc cctcttcctt actgcaatag
     2701 ttcagtaggg tctctgatta cgaccatctg aatctttcgc catcgccggc cgtccaggga
     2761 ttgccgcgca tgtgatagcc gccttcttcc caaaagccgg cctgatcctc ggcgaggaag
     2821 cgcacgcctt tcacccattt cgcggatttc caggcgtaga gttgcggaat gatcaagcgc
     2881 accgggccgc cgtgctcggg aggaatgggc gcgccgtcat gcatgaacgc aaacagcgaa
     2941 tcttccttta ggaagtattc catcggaacg ttcgtcgtcc acccgtagtc gtacgccagt
     3001 gccagcgcaa acttcgcttc gggtttgacg cccgcacgtt cggcgatctc gcgcgttgag
     3061 actccggtcc agacgttgtc gagccgcgac cagcgggtga cgcaatgaaa atccgc
//
LOCUS       DATDBY010000550         3230 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1270551, whole genome shotgun sequence.
ACCESSION   DATDBY010000550 DATDBY010000000
VERSION     DATDBY010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3230
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1270551"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..650)
                     /locus_tag="VIT19_10290"
     CDS             complement(<1..650)
                     /locus_tag="VIT19_10290"
                     /inference="COORDINATES: protein motif:HMM:NF024748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY5839412.1"
                     /translation="MKRIKTTVVFSLLLTLFLALPQYLRAQAPQKPQAPQALVDEAAR
                     VTLAKFADKKLTASQLSITLIDLRNPQQPVTASYRGNERIYPASVVKLFYFAAVHRWL
                     EDKKIQETDELKRAVRDMVVDSGNEATQYVLDVLTHTTSGYELPPKEMAEWQHKRDAV
                     NRYFTSLGYTNININQKTFCEDAYGRDKVSRGPKGENRNKLTTDATARLFAEIATGR"
     gene            complement(675..2195)
                     /locus_tag="VIT19_10295"
     CDS             complement(675..2195)
                     /locus_tag="VIT19_10295"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEY5839413.1"
                     /translation="MNSKLQTPSKPTNGQLVRGLTLIAAISVVVGNVIGTGVFLKARV
                     MTCNVGTPGRVLGVYVIAGLLSLAGALSYAELSAMMPRAGGEYVFMREAYGRPWAFLY
                     GWMSFFIGKAGSQAALGVQLALFLNTMIGGRLGGDFFSANVFGYAIPFGKVQVIALAS
                     ILIVTGINCLAVRVSGGVASILSAVKVALVLVIGIGAFLLADGADWSHLTMANAGGTC
                     EKVSAAAQIGFGGFMAAMLGALWSYDGWNNVTLVSGEVQNPSRNLPRALIGGTLLIMA
                     LYLFVNLAYFYVMSPTDVASVSTSSSVATEVARRFLGPIAITFIAAALLSSSFGTLHT
                     SILTGARVPYAMARDGLFPRSLSHVSPRTHVPTGALIVQAVWACILVIVFSSSFDTLT
                     DYAIFGLMIFYVLCTAGVFVLRRKMPDAERPYRVLGYPVVPILFILSATLILASTLLG
                     ARGDFVSGLSSIASGNVLSGLGVLARNPAISGVVLIAAGLPVYWLWTRLAQRGRSA"
     gene            complement(2243..2743)
                     /locus_tag="VIT19_10300"
     CDS             complement(2243..2743)
                     /locus_tag="VIT19_10300"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEY5839414.1"
                     /translation="MRYTRFEDLPVWNNAVELAVAVYSMTDRIQFRRRRSLRDQIERA
                     AVSVSNNIAEGFERGTNNELLAFLYIARGSAGEVRSMLCLIERLPALRELGGELREVK
                     SKAESCSRQLKAWAKALQNSDFKGERHVNAKVKRRDQAAREREEFLNELAEIRAKPKA
                     ATSRND"
     gene            complement(2943..>3230)
                     /locus_tag="VIT19_10305"
     CDS             complement(2943..>3230)
                     /locus_tag="VIT19_10305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839415.1"
                     /translation="ALDAQYKVAGPLCDSGDVYFDIERHGRLPDYRRLPSEVKPGEVL
                     GLLNAGAYSFSQMFPYNGRPLPAAVMVRAGGQADVIRKRDTYEDLLFNEVW"
BASE COUNT          721 a          933 c          920 g          656 t
ORIGIN      
        1 cggcctgttg cgatctcagc gaacagacgc gcggtcgcat cagtcgtcag cttgtttcga
       61 ttctcgccct ttggcccgcg cgagactttg tcgcgcccat acgcgtcttc gcagaacgtt
      121 ttctggttga tgttgatgtt cgtgtagccg agcgacgtaa agtaacggtt caccgcatcc
      181 cgtttgtgct gccactcggc catttccttc ggcggcaatt cgtaaccact cgtcgtatgc
      241 gtgaggacgt cgaggacgta ctgcgtcgct tcgttgcccg aatcgacaac catgtcgcgg
      301 accgcgcgct tgagttcgtc ggtctcctga atctttttgt cttccagcca ccgatgcacg
      361 gcggcaaagt aaaagagttt gacgacgctg gcgggataga ttctctcgtt gccgcggtag
      421 ctcgcggtta cgggctgctg cggattccgc aagtcgatca acgtgatcga aagctgactc
      481 gctgtaagct tcttgtcggc gaacttagcc agcgtcaccc gcgcggcttc atcgaccagg
      541 gcttgcggcg cctgcggttt ttgaggcgcc tgcgcccgga ggtactgggg cagtgcgagg
      601 aaaagcgtaa ggagaagtga aaagacaacc gtagtcttga tgcgtttcat ttttgtttac
      661 cagtcgatag gtagctatgc actccgtccg cgttgagcca gacgagtcca cagccaatac
      721 acgggaagtc cggcagcaat caagacgacg ccggagatcg ccggattgcg ggcgagtaca
      781 ccgaggcctg agagcacgtt gccgctcgcg atcgaactca gcccgctcac aaagtctcca
      841 cgcgcgccca gaagcgtgct cgccaaaatc aaagtagctg acaagatgaa gaggatcggc
      901 accacgggat aacccagcac ccgataaggt cgctcggcgt ccggcatctt gcggcgcagg
      961 acaaatacgc cggcggtgca gagcacgtag aaaatcatca gtccgaagat cgcgtagtcg
     1021 gtaagcgtgt cgaacgacga tgagaagacg atgacgagga tgcaagccca aactgcctga
     1081 acgatcaaag cgccagtggg cacgtgcgtg cgcggcgaaa cgtgggaaag gctgcgtggg
     1141 aacaatccgt cgcgcgccat ggcatatggt acgcgcgcgc cggtcagaat cgaggtatgc
     1201 agcgtgccga aggatgaaga gagcaacgcc gcagcaatga acgtgatcgc gattggtccc
     1261 aggaatctac gcgcgacttc cgtagctacc gacgaactgg ttgagacgct ggcgacatca
     1321 gtgggagaca tgacgtagaa gtaagcaaga ttcacgaaca ggtacagcgc catgattaga
     1381 agcgtgccgc caatcagcgc gcgcggaaga tttcgactcg ggttctgcac ttcgccggaa
     1441 accagcgtca cattgttcca cccgtcgtac gaccagagcg cgccgagcat cgcggccatg
     1501 aatccgccaa acccaatttg cgcggccgcg ctaacctttt cgcaggtccc gccggcattc
     1561 gccattgtca gatgcgacca gtccgcgccg tccgccaaca gaaatgcgcc aatgccgatg
     1621 accagcacga gcgcgacttt gactgctgag agaatcgaag cgacgccgcc gctgactctg
     1681 actgccaggc agttaattcc cgtcacgatc agaatggacg ccaacgcgat gacctggacc
     1741 ttcccgaatg gaatcgcgta gccaaacaca ttcgcggaaa agaagtcgcc gccgaggcgg
     1801 ccgccgatca ttgtgttgag gaagagagcg agttgcactc cgagcgctgc ctgcgagccg
     1861 gctttgccga tgaaaaatga catccagccg tacagaaacg cccatggccg gccgtatgct
     1921 tcgcgcatga aaacgtactc gccgccggcg cgcggcatca tggcagagag ttctgcgtaa
     1981 ctcagcgcgc ctgcgagcga cagcagtccg gcgattacgt agaccccgag gactcgcccg
     2041 ggcgtgccga cgttgcaagt catcacgcgc gctttgagaa agacgcccgt gccgatgacg
     2101 ttgccgacga cgaccgagat cgccgcgatc agcgttagcc cacggacaag ctggccgtta
     2161 gtaggtttcg acggagtctg gagtttcgaa ttcattttgc tcactcgtcc cacgcggtct
     2221 tgaattctcg ccgatttccg cgttaatcgt tccgacttgt ggcggctttg ggcttcgcgc
     2281 gaatctcggc tagttcgttt agaaattctt cgcgctcgcg agcggcttgg tcgcggcgct
     2341 tcaccttcgc gttaacatgg cgctcgcctt tgaaatcgga attctgaaga gctttagccc
     2401 aggccttcaa ctgtcgcgag cagctctcgg ctttggactt cacttctcta agctcgcccc
     2461 caagttctct caatgccggc agtcgctcga tcaggcagag catagaacgc acttcgccag
     2521 ccgaaccgcg cgcgatataa aggaaggcca ggagctcatt gttagtgccg cgctcgaaac
     2581 cctcagcgat gttattcgag acggaaacgg cggcacgctc gatctgatct ctgagactac
     2641 ggcggcgtct gaactgaatg cggtccgtca tgctgtaaac ggccacggct agctcgactg
     2701 cattgttcca aactggtaag tcttcaaaac gggtgtaacg catgggagtt ttctccttgg
     2761 gaagtagtgt cataaagcca tggctatgat tcaagattcc aaattcaaga ttccaaattc
     2821 aagattcaag attcaagatt taagcgggat taaacagagt ttccatctgg aatctggaat
     2881 tttgaatgtg gaattctgat ctactcatct aacatggttg ggttcaccac cgacatgaag
     2941 tgctaccaca cctcattgaa caaaagatct tcgtacgtgt cccgctttcg aatcacatcc
     3001 gcttggccgc ccgcgcgcac catcaccgcc gcaggcagcg gccggccgtt gtaaggaaac
     3061 atctgcgaga acgaatacgc gccggcattc aatagaccga gcacttcgcc aggtttaact
     3121 tcgcttggca gccgacggta gtcaggcaga cggccgtgtc gctcgatgtc gaaatacaca
     3181 tcgccggaat cgcacagcgg ccccgcgact ttgtattgcg catccagcgc
//
LOCUS       DATDBY010000551         3919 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_356344, whole genome shotgun sequence.
ACCESSION   DATDBY010000551 DATDBY010000000
VERSION     DATDBY010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3919
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356344"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..1420)
                     /locus_tag="VIT19_10310"
     CDS             complement(98..1420)
                     /locus_tag="VIT19_10310"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEY5839416.1"
                     /translation="MIFRNAKLILCTDMAITLFSVVTSLIGARALGPAGRGDLLLITL
                     WPIVIAMLIEIGLPNAYRYWMAKDPTRVSALFTNAIIYTVVLSAASFVVGEVFIPRLI
                     GQRSDEVMLLVRVYMINIPGVVLLSLMRGLLEGTRRFGWSGAARFIFFVVQATGFAAL
                     WFAGQMTVATATLTMIAAQTVAMSVAVIAVLRELKPRWQPSWPEFKTSMSYGMRDYAG
                     VLADYTTLRVDQLMLGAMATNAAVGLYVVAVRLSEMTTFVASAAADALMPEVARSGKD
                     DEPEALLARMLRLTMYLNLIVLVPLWLLAPTMLRILFGPSFVEATSAFRWLLVAAIAW
                     SASSIVIRGLQGFGYPGLTTIARFFSAGVSVVALIVLLPRMGITGAAISSLIGYTVLF
                     VVSLFALIQRRRLGFWHYVRPRRHDIPMAQLRASWANLNLLTARGTEG"
     gene            complement(1417..2541)
                     /locus_tag="VIT19_10315"
     CDS             complement(1417..2541)
                     /locus_tag="VIT19_10315"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016755 - aminoacyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0044038 - cell wall macromolecule
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan bridge formation glycyltransferase
                     FemA/FemB family protein"
                     /protein_id="HEY5839417.1"
                     /translation="MPSWKAFTDGEASVAWDEALARFDDCSPFQSYAWGEYRRGLGWQ
                     PYRWAAVNEQNEIVAMLQAYLRRHRFGIGMLWSEGGPVGDLSVCDEGLQSIIRETVGL
                     KRLYSRFRCDRPRAVPQVLKLKAQGWSVPWAAMNSGYTAVLDLNVDDQALFAGAARNW
                     RANVRRAEKNNLVTHQWLNPAAEAIHSAFHSMEKAKGLDEQHSRDEIEQLLEKAGHQL
                     ILYRSDDERGELMSLGGALVFGSQANLWLFATPEQGRTSRASYAVFWALVQHCKRIGV
                     TSYDLGGIDPVNNAGVYRFKKDSGATPVELLGEWDWATQPWLRWFGNWAIQQRSRVRR
                     ADKVLKKPVTEPRATPTQAASPLASPATSKSLLPIETNSL"
     gene            complement(2546..3703)
                     /locus_tag="VIT19_10320"
     CDS             complement(2546..3703)
                     /locus_tag="VIT19_10320"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5839418.1"
                     /translation="MRVLRIAHASLTPRLRERERALARCYPDVQLEVVTTERWREAEV
                     DVEATDDDLFPVRKARSHFSRHIQLFAYDPRPIIGALRQFQPDVIDLNAEPYSVQCAE
                     VLTLRNWFAPRVPVVMGTSQNIFHRYPPPFNLLERRGLKQVSAAYGCSESVRELLIAK
                     GFRRTIRVIPFGVNLTEYNFRDRLVRESKTLTIGFVGRMLPGKGLNILAKALERISSD
                     DWKLLAVGNGPEREPFTQRLKELNLIQRAQFTGAVSYEKMPPYFQEIDLLVVPTQTTA
                     RIREQFGRVIVEAMASGVPVIGSTCGAIPEVMGDAGVVFPEGDAEALATAIQRLLTGE
                     DLRRGLARAGRERVEQHYSWERVASQMYELFHEVLRPAVGTEMTQSVEATA"
     gene            complement(3728..>3919)
                     /locus_tag="VIT19_10325"
     CDS             complement(3728..>3919)
                     /locus_tag="VIT19_10325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839419.1"
                     /translation="GRNDHMLRFVAKASGVYGLTEGRLHRFREQHLRTAINTARSVLS
                     SNPSRVASTTIVSALSLIE"
BASE COUNT          903 a         1209 c         1029 g          778 t
ORIGIN      
        1 gcccaaaccg taaacagact ggcagcctga agcggcgcca tccaaaggat cgcgagcttt
       61 cgtggctgcg gtgcttgttg tacggccgtg ctcaacttta tccttccgtg cctcgcgcag
      121 taagtagatt cagatttgcc cacgacgccc gcagctgggc catcgggatg tcgtgccggc
      181 gcggtcttac gtaatgccag aacccgaggc ggcggcgttg aatcaaggca aacagcgaca
      241 cgacgaacag caccgtatag ccaatcaacg acgagatggc cgcgcccgta attcccatgc
      301 gtggcagcag cacaatcaga gcgacaacac tcacccccgc agaaaagaaa cgcgcaatag
      361 tggttaatcc gggatagcca aagccctgga gcccgcgaat tacaatcgag ctggcgctcc
      421 aggcgatggc ggcgacgagc aaccatctaa aggcgctggt ggcttcaaca aagctcggcc
      481 caaacaaaat ccgcagcatc gtcggcgcca gcagccacag cggcaccagg acgatcaaat
      541 tgagatacat cgtcagtcgc aacatgcgcg ccagcaatgc ttcgggctca tcatccttgc
      601 ctgaacgcgc gacttccggc atcaacgcat cagccgccgc actggccacg aatgtagtca
      661 tctctgaaag gcgcacggcc acaacgtaca agccgactgc cgcattcgtt gccatcgcgc
      721 ccagcatcaa ctgatcaact cgcaaggtcg tatagtcggc gagcactccg gcataatcgc
      781 gcatcccgta gctcatcgat gtcttgaact caggccaact aggttgccaa cggggcttta
      841 actcacggag caccgcaatc actgcaaccg acatcgcgac ggtctgggcg gcgatcatcg
      901 tcaacgtcgc agtagccaca gtcatttgtc cggcaaacca aagcgcggca aagcccgtgg
      961 cttgcacgac aaaaaagata aagcgcgcgg cccccgacca tccgaaacga cgcgtgcctt
     1021 ccaacaagcc gcgcatcaaa ctaagcaaga caacgcccgg gatattgatc atgtacaccc
     1081 gcaccagcag catgacttcg tcgctgcgtt gtccgatgag acgcgggata aacacttctc
     1141 cgacaacgaa gctggcagcg ctcaagacca cggtgtagat aatcgcgttg gtgaacagcg
     1201 ccgacacgcg cgttggatct ttggccatcc agtaacggta cgcattgggc aagccaattt
     1261 cgataagcat cgcgatcacg atcggccaaa gcgtgattag caaaagatca ccgcgtcccg
     1321 caggcccgag agcacgcgct ccgattaggc ttgtcaccac tgaaaacagt gtgatagcca
     1381 tgtcggtaca gagaattagc tttgcgtttc gaaaaatcac aatgagttcg tctcaatcgg
     1441 caaaagactt ttgctggtcg cgggggaagc aagcgggctc gcagcttgag ttggcgtggc
     1501 tctcggttct gtcaccggtt tcttcagtac tttgtcggcg cgccgcacgc gacttctctg
     1561 ttgaattgcc caattcccaa accaacgaag ccacggttgc gtcgcccagt cccattctcc
     1621 caacagttcg accggcgttg cgcccgaatc ttttttgaag cgatacacgc cggcgttgtt
     1681 caccgggtcg attccgccca ggtcgtacga ggtcaccccg attcgcttgc aatgctgaac
     1741 gagcgcccag aaaactgcat aggacgcgcg cgaggtccgt ccctgctcag gagtggcaaa
     1801 cagccaaagg ttcgcctggc taccgaaaac cagagcccct cctaaactca tcaactcgcc
     1861 gcgctcgtcg tcgctgcggt acaggatcaa ttggtgacca gccttttcga gaagttgctc
     1921 gatttcgtcg cgcgaatgct gttcgtccag gcctttcgcc ttctccatag aatgaaaggc
     1981 cgaatgaatg gcttctgccg ccggattcag ccactgatgc gttacaagat tgttcttttc
     2041 tgcgcggcgg acattcgccc gccagttccg agcggccccg gcgaacaacg cctggtcatc
     2101 cacgtttaaa tcaagcacag cggtgtaacc cgaattcatt gccgcccaag gcacgctcca
     2161 gccctgcgcc ttgagtttca ggacctgcgg aactgcccgc ggccggtcac agcgaaaacg
     2221 ggagtaaagc cgtttaagcc caacagtttc gcgaattatg gattgcaaac cttcgtcgca
     2281 aactgacaaa tccccgacag gtccgccttc gctccagagc atgccgatgc caaagcgatg
     2341 acgacgcaag tacgcttgca gcatcgcaac aatttcgttc tgctcgttca cagcggccca
     2401 gcggtaaggc tgccaaccca gaccgcgtcg atattcgccc cacgcgtatg actggaacgg
     2461 cgaacagtcg tcaaagcgcg ccagtgcctc gtcccacgcg acactcgctt cgccatccgt
     2521 aaatgctttc cagctcggca tctctttagg cagtggcctc tacgctttgc gtcatctcag
     2581 ttcccacggc aggcctcagc acctcgtgga acagttcgta catctgactc gccacacgct
     2641 cccacgagta gtgctgttcg acacgttcac ggccggcgcg agccaaccct cgacgcagat
     2701 cctcacccgt taacaatcgt tgaatggcag ttgctagagc ttctgcgtcg ccttccggga
     2761 aaacgacacc agcgtcaccc atgacctcag gaatcgcgcc gcacgtcgag ccgatcacgg
     2821 gtacaccgct ggccatcgct tcgacaatga cccggccgaa ctgttcgcga attcttgcgg
     2881 tggtttgcgt cggcacaacc agcagatcga tctcctgaaa gtagggcggc atcttctcgt
     2941 agctgacagc gccggtgaat tgggctcgct ggatcagatt gagttccttt aacctctgag
     3001 tgaatggttc ccgctcggga ccgttaccta cggccaacaa cttccaatcg tcactcgaaa
     3061 ttcgctcgag agccttcgcc aggatgttga gccctttgcc aggaagcatt cttcccacaa
     3121 agccaatggt gagcgtcttg ctttcccgca ccagccgatc acgaaagttg tattcggtaa
     3181 ggttgacgcc aaacggaata actcgaatgg ttcttctaaa acccttggca atgagcaact
     3241 cacgaactga ctcgctgcaa ccgtaagccg cagacacctg tttcagaccg cgccgctcta
     3301 acagattgaa gggcggagga tagcggtgga agatgttttg cgatgtaccc ataactaccg
     3361 gaacgcgggg cgcgaaccag ttacgcagcg tgaggacttc cgcacattga acgctgtaag
     3421 gctcggcatt gagatcgatt acgtccggct gaaactgcct cagggcgccg ataattggac
     3481 gcggatcgta cgcaaacaac tgaatatgtc gcgaaaaatg ggagcgtgct ttcctgacgg
     3541 gaaagagatc atcgtcggtg gcttcgacgt cgacttcagc ttcgcgccaa cgctcagtcg
     3601 tcacaacttc gagttgcacg tccggatagc accgcgccag cgctctttcg cgctcgcgta
     3661 gccgcggggt caaactcgca tgagcaattc gcagtactcg catgtcacat tttctggttc
     3721 aggtcttcta ttcgatcaag ctcagcgccg agactatcgt ggtgcttgcg actcgcgacg
     3781 gattggagct gagaaccgaa cgcgccgtat tgatcgcagt tctcaggtgc tgttcgcgga
     3841 aacggtgcaa cctgccttcg gtcagtccgt aaacgccaga cgccttcgcg acgaatcgca
     3901 gcatgtgatc atttcgacc
//
LOCUS       DATDBY010000552         2601 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_26032, whole genome shotgun sequence.
ACCESSION   DATDBY010000552 DATDBY010000000
VERSION     DATDBY010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26032"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..670
                     /locus_tag="VIT19_10330"
     CDS             <1..670
                     /locus_tag="VIT19_10330"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5839420.1"
                     /translation="LRTEFNEWARAGKGESMERGHRPVGEQALALMNVPADARVLDVG
                     CGSGWATRLLAGYASSGRVTGIDISDEMVRLAGKSSQSYANIDFQTASAEQLPFADNE
                     FTHAFSMESLYYYADISKALKEIQRVLKPGGLFVAVVDMYWESDATHQWIEMLNVPVQ
                     LLSIQDYRSLFEGAGFDNVRDERIRDPRPVPDDYTSGSFKSRDDYVKYRDTGSLMVSG
                     KAAK"
     gene            667..1221
                     /locus_tag="VIT19_10335"
     CDS             667..1221
                     /locus_tag="VIT19_10335"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0009691 - cytokinin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LOG family protein"
                     /protein_id="HEY5839421.1"
                     /translation="MNVGSERIVTIFGGSKCGEDSPEYAEAHRAGELLAEAGFTICTG
                     GYAGVMEAASRGAHERGGRVIGVTMNQFKSEPNRYLTEKIPSEHFYERLQRLITQSVG
                     YIALRGGMGTVTEISLVWNKMQTRVLEPRPLVLLGDCWSPIVKAWQQHLAVTEDDVKL
                     LKFAVTPEEAVAIIQRDAAAVAAV"
     gene            1308..2165
                     /locus_tag="VIT19_10340"
     CDS             1308..2165
                     /locus_tag="VIT19_10340"
                     /inference="COORDINATES: protein motif:HMM:NF012956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HEY5839422.1"
                     /translation="MKRCPKCHRAYEDETLRFCLEDGSPLFDARDSDAPATEILPARS
                     APTLKSTGPTVPSYQALSGPAPEIHDARGSNPVLTVGVIAIVGLLFALVAIAGVFVFR
                     QSREREPEVARTATPSTSPTAVTRTGDAGPNATVTSSPVNGTPLKITASASSIRLAVQ
                     ANTYYASNAIDGKRATAWIEGADGPGIGEWIRFDFDREINLHRILWQPGYFKSPAIWN
                     QNNRLATVRAEFSDGTSRELTFADRMDSQKMDVGAVRTRWVKFVITAVHYGSDPDTAV
                     SEVAFEWEP"
     gene            2185..>2601
                     /locus_tag="VIT19_10345"
     CDS             2185..>2601
                     /locus_tag="VIT19_10345"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HEY5839423.1"
                     /translation="MADGLIKTGINHEALPGAGKTVGILGVPLAFGQSMLGVELGPAA
                     TRVAGLTSAIGKLGYEVNDRGDLRVERPRTYPRNGEQLKYLNEVFATCTALASETEKI
                     VEAGELPITIGGDHSIAIGSLSGVVKAFRKRGQKLGL"
BASE COUNT          568 a          693 c          796 g          544 t
ORIGIN      
        1 acttcgcact gaattcaacg agtgggcgcg ggccggtaag ggtgaaagta tggagcgcgg
       61 ccatcggccg gtgggcgaac aggcgctggc gctcatgaac gtgccggcgg acgcgcgcgt
      121 gctggatgtc ggatgcggtt cgggctgggc cacgcgtctg ttagctggtt acgccagcag
      181 tggccgagtg actggtatcg atatttccga cgaaatggtc cgcctcgcgg gcaagtcttc
      241 gcaatcgtac gcgaatatcg attttcaaac ggccagtgcc gagcagctac cgtttgctga
      301 taacgaattc acacacgctt tctcgatgga gtcattgtat tactacgcgg acatctcgaa
      361 agccctgaaa gaaattcagc gcgtgctcaa acccggcggc ctgttcgtcg cagtcgttga
      421 catgtattgg gaaagtgatg cgacgcatca atggatcgag atgttaaatg tcccggtcca
      481 actgctcagc atccaggact atcgttcgct gttcgagggg gcgggcttcg acaacgtgcg
      541 ggacgaacgc attcgggatc cgcgaccggt gccggatgat tacacgagcg gctcgtttaa
      601 aagccgcgac gattatgtga agtatcgaga cacagggtcg ttgatggtca gcggaaaggc
      661 cgcgaaatga acgttggctc ggagagaatc gttaccattt tcggcggctc gaagtgcggc
      721 gaagattctc cggaatacgc tgaagcacat cgcgcgggcg aattgctcgc cgaagcgggc
      781 ttcaccatct gcaccggcgg ctatgcgggc gtgatggaag cggccagccg cggcgcgcac
      841 gaacgcggcg gccgcgtcat cggcgtgacc atgaaccaat tcaagtcaga accgaaccgt
      901 tacttgactg agaagattcc gtccgaacat ttttacgagc ggcttcagcg attgatcacg
      961 caatcggtcg gctacatcgc cttgcggggc gggatgggga cggtgacgga aatttcactc
     1021 gtctggaaca agatgcagac gcgggtacta gaaccgcggc ctttggttct gctgggcgac
     1081 tgctggtcgc cgatcgtgaa agcatggcag cagcatctcg cggttacgga ggatgacgtg
     1141 aagcttttga agttcgcagt gacgccggaa gaagccgtgg cgataattca acgagatgcc
     1201 gcggcggtag cggcggttta atccacagat tacgcagatt aaaatgatcg agctaacgcg
     1261 cgcaattaaa ctccgcttat ccgttctgta atttttggat agttcttatg aagcgttgcc
     1321 cgaaatgcca tagagcttac gaagacgaga cgctgcgttt ctgtctcgaa gacgggagtc
     1381 cgctttttga tgcgcgcgat tcggatgcgc cggcgactga gattcttccc gcgcgcagcg
     1441 cgccgacatt gaaatcgaca ggcccgacgg taccttcata tcaagccctc agcggacctg
     1501 cgccggaaat acacgacgcg cgcggttcga atccggtttt gactgtcggc gtgattgcca
     1561 ttgtcggctt gcttttcgcg ctggtcgcga ttgccggagt gtttgttttt cgacagagtc
     1621 gcgaaaggga gccggaagtt gctcgcaccg ctacaccgtc tacgtcacca accgcggtaa
     1681 ctcgtacagg ggacgccggt ccgaacgcaa ccgttacctc atcgccggta aatggcacgc
     1741 cgctgaaaat taccgcctcg gcgtcatcga ttcgcctcgc ggtgcaagcg aatacttact
     1801 acgcttctaa tgcgatcgac ggaaagcgcg cgacggcttg gattgaaggc gcggacggcc
     1861 ccggcatcgg cgaatggatt cgctttgatt ttgatcggga gattaacctt catcgaattc
     1921 tttggcagcc cggctacttc aagagtcccg caatttggaa ccagaataat cgcctcgcaa
     1981 ccgtccgggc tgagttctcc gacggcacct cgcgcgagtt gacattcgcc gaccggatgg
     2041 acagtcagaa gatggatgtt ggcgccgtcc gcacgcgatg ggtgaagttc gtcatcactg
     2101 cagttcatta cggaagcgat ccggatacgg cggtttccga agtcgccttc gaatgggagc
     2161 cataaacaca cacggataaa ctaaatggca gatggcttga tcaaaacggg tatcaatcac
     2221 gaagcattgc ctggagcggg caaaacggtc ggcattctcg gggtgcccct ggctttcggt
     2281 cagagcatgc ttggcgttga actcggcccg gcggccacac gggtcgcggg attgacttct
     2341 gccatcggca agcttggcta tgaagtaaat gaccgcggcg accttcgggt cgagcgaccg
     2401 cgaacatacc cgcgcaacgg tgagcagctt aagtacctga acgaagtctt cgccacttgt
     2461 acggccctgg catccgaaac tgaaaagatt gtcgaagctg gcgagctacc gataacgatc
     2521 ggcggcgacc attccattgc gatcggttcc ttgtcgggag ttgtgaaagc gtttcgcaag
     2581 cgggggcaaa aactcggact g
//
LOCUS       DATDBY010000553        11861 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1888158, whole genome shotgun sequence.
ACCESSION   DATDBY010000553 DATDBY010000000
VERSION     DATDBY010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 11861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11861
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1888158"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..1344
                     /locus_tag="VIT19_10350"
     CDS             190..1344
                     /locus_tag="VIT19_10350"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5839424.1"
                     /translation="MRASQTYDVAVIGAGAFGAWTAYCLRQSGKRILLIDGYGPGNSR
                     SSSGDESRIIRMGYGGDEIYSRSAWRSLQVWKELFAHTGEKLFHKTGVLWLAHEGDPY
                     PASTFETLTNLRIPAEELTIQKLSTRYPQICHEGIGGAFLEPESGVLLARRAVQAVVR
                     EALKSGVEYLQDSIESPNNAGRVDKLVTSGGERISAAVYVFACGAWLPKIFPDLLAER
                     IHPTRQEVFYLGAPAGKRFQSPALPVWIDFKNEAYGLPDIEGRGVKVAIDRHGEAFDP
                     DTNDRVASREGLAEVRRYLARRVPELQDAPVNESRVCQYENTSNGDFLIDRHPDFENV
                     WLVGGGSGHGFKHGPFVGEYVAARIEGRVEGVEPRFSLATKSREHQRIIY"
     gene            2194..2922
                     /locus_tag="VIT19_10355"
     CDS             2194..2922
                     /locus_tag="VIT19_10355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839425.1"
                     /translation="MNKRLLAVTVVLLCAIIATATALTVKNMVRPKVAINATTTRAKS
                     PASGDVHPSALAPAALKPQGQIRPTTDDVADYVVYWHLFHHNNLLLKKAQETESLGQD
                     GSFMREFYKNKAKLDDTQTLTFNEISAKCESDVKALDDEAKVIIAHFRARHPGGVLQQ
                     GETLPPPPPALAALQQRRNDAILRARDRLQQQFGETAFANFQTFVQEKVASQIKRKPL
                     NTLRPAMRNGEQRQPRGIPNKVQR"
     gene            3070..6273
                     /locus_tag="VIT19_10360"
     CDS             3070..6273
                     /locus_tag="VIT19_10360"
                     /inference="COORDINATES: protein motif:HMM:NF013955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IPT/TIG domain-containing protein"
                     /protein_id="HEY5839426.1"
                     /translation="MNETKAQTVWGISGYDYDQNQHQLYGYHSTEVDYWAWLYYDVYV
                     EGVISDQYGSELDFDSDFDGNMKAEAYTQATYTPGEYYYVISDHWLVAYYSEPAPGGG
                     GGSYWNPFGYGFSPGGGYGGFFGFSPGTGGYTYSQYIYLGWTGWELYFYGEPHIDQMV
                     PTSAPLGQSIEVNFEGTSFGTNPTINVSGSGISVGSPTFSTDTRLTAIFNIAENASTG
                     NHSVSITTSEGVTSNSVNLNVGDRTPVINSINPSNGDAGQVVPVTISGTGFGSTPIVD
                     VTGGINVQITSRNNTQITANFTIPSNTTPGNHEVRVTSNGYGGTGFISGGGSSSTSNA
                     VNFTVNAQAAPHITSYAPQSGQLDTSIEINVIGENFTNNRTLQISGQGVTVQSYTNVA
                     DPDHQIVAILNIAENAETGNHAISVSTGTQTSNSVNFQVGDQTPTITSITPPSGTKGT
                     NTQVVLTGRGFGINPQLAISGTGVNITINSATDTRITANFAISGLAEQTIRQVTLTSQ
                     GISGSGFIQSPGATPNAQANFGIDAAKVKINSVDKRFAPSVERLNVNYTITPVGYNAP
                     VGRLEIFKKGDTTNPIYRDTSIPTGGTNVQYTQGGTPGWDGMANMGAGAGKFVGPEDS
                     PFTVRVTIAADGSFGTTKMDQKEFKVELDSIETTPKDNNEYNIVKPQPTTPPVPAQTP
                     EIATEVKVVIKLKNKAGTGVPTAIPFKLNWSFEDPDDTSGKNLVDPNGSTGDDNAPIS
                     NLGKRGPGSIMWRAVTGTTTAVDPAGRTAVSDAIVTPGPDLGSAKISFLSSNVAADNY
                     ILKLEVKNSAGTLVKEVKFKKWSVRKALTFTRFFKMQNGVDVKSVASYDNVHEAFDED
                     GYTDYTTGQNQTNLTAAQSPEFAVALLAPNAAETPTNQEKVDYAAGSAAAKQAIEGKA
                     QAWFQRNYLLQGNALVAYAGTIGAPAFSLIGCRFISEKFDGRPNPNGTNHYPAGITIV
                     GSDGLPHDPDDDWGEIEGGEVGGFAFIFLNTKPMARLIVAARHEVGHASDHELFGLED
                     HALSGLMHKNADQGPNLPYGNENFNEDSILRLRGWSR"
     gene            6275..10573
                     /locus_tag="VIT19_10365"
     CDS             6275..10573
                     /locus_tag="VIT19_10365"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBG domain-containing protein"
                     /protein_id="HEY5839427.1"
                     /translation="MTKNKLFTRAIRSIAIVAALLLVYGGWRAAGISVSAQSSPFTLA
                     VRPVDAVTGATKTSFFVGETVAVVLTVTNQSAVAQTITDLESTEIPVTLTAIPNRSDR
                     PDVRTGTRGGAGRTVQDSAGNVFWSSAPKQNVVLAPGQSLSVTINDVSRFFASKLDDG
                     TYTLSATYNGIVQAQTSFTVFIDQAQSVPVLQQMAAGQNDLDRRWALTYLDIIQKPSI
                     SGRVVNSSGAPLGGVTLYVTGSLTSNLSTLADGRYDLMQLTSGGSYTLTPALEGYTLA
                     PATRTFSNLTTKQVDVNFTATRVGDGVNLAVDATVTASSTLDDDYRAESVIDGSTSGV
                     GWGMGSGGWEDGTLNAFPDWIEVNFGAAKAIDWINVYTLQDNFTNSVEPTITQTFSLY
                     GITDFDVQYWSGSTWVIVPGGAVNGNNNVWRKFTFPTVTTTKIRVFVRNGLAGKSRIT
                     EIQAFHQNVPPTVSITGNYQGAPGTTFQFTANAADSDGTISRLDWDFGDGATATGANA
                     SHTYPTAGTFTAAVVVTDDGGETARATKTVTITALPQPPTASAGGPYNGVVGSPVVFE
                     GRASFDPDGSITTYQWNFGDSTSGTGPTPSHTYAQTGTYSVTLVVTDNSGSTASQTAI
                     ATIATGPPAKASQTITFNAPANKTYGDAPFAVSASSSSGLSVSLAIISGPATISGSSV
                     TITGAGTVTIRASQAGDTNYNAAANVERSFTVAKAAASITLSNLNQTYNGTPRPATAT
                     TTPAGLAGVSITYTGSATAPTNVGSYSVIASLTNDNYTGNATGTLVIAKAAATIALSN
                     LNQTYNGSPRPATATTTPAGLSGVSITYNGSATAPINAGSYSVVAALNNQNYTATNAT
                     ATLVISEGGSGPQPVTWTNTVGVTANGNSLTKTASEGWGNAGAASTQTIASGDGYVEF
                     TATETNTYRMIGLSNGDSNQNYPDIDFAIYPAIGATLDIREGGVSRGTFGSYATGDTL
                     RVAVEGGVVKYRKNGVLLYTSAGTPTYPLLVDTSFYSNGGTISNVMISTGSSGGESTQ
                     NVSWTNTVGVSASGNNLTRTAAGDAWNAGAVSTQMISSGDGYVEITASEANKKRAFGL
                     TNNTSVTTYPHNVYGMHLSETGQITIHEGDGVYGVFGTYTSGDVLRVAIEGGVVKYRK
                     NGTLLRTSTLAPTYPLRAGAALYTNGSTVNSAVLSSGGGGTSTQTASWTNSVGVAVNG
                     NNLTKTAAEGWGNAGASSTQSIASGDGYVETTMSETNMYRMIGLSNGDSHQNYNDIDF
                     AFYPAIGATLYIYEGGTSRGTFGTYASGDVLRIAVEGGVVKYRKNGVLLHTSAVAPSY
                     PLLVDTAFYSPNSTINNVIISGNLSGGGGGSAQLRWVVTDHLGMPRLVFDQTGSVANV
                     SPHDYLPFGKELFGGPPSHPGVGGRTTTMGYRDAHPKSWPRIIYDFGLLEGGRR"
     gene            complement(10820..>11861)
                     /locus_tag="VIT19_10370"
     CDS             complement(10820..>11861)
                     /locus_tag="VIT19_10370"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GAF domain-containing SpoIIE family protein
                     phosphatase"
                     /protein_id="HEY5839428.1"
                     /translation="VIDEVVNNGKSVLTSDAQSDPRFMGGTVVLQGVRSVLAVPLGVG
                     ENVFGIIYADSPIAEGRFTEDHLKVLTTLASVAAIRVENARLTEEQFERERLERELQV
                     ASEIQQRFQPASAPQVPGYELQGISFPCYEIGGDYYDFIHKRNGNLVVALGDVSGKGT
                     SAALLMSSLHAAVHAQFDTHGSLAETISSINRYLVESIPANRFVTLFYADLNPKTGEL
                     AFLNAGHNPPLIVHASGTMEQLAAGGLPLGIMADADFREGRTTLNPGDVLVIYSDGVS
                     EATSPTGEEFGPTRLYEAVARNLDASAAGIRDRIESALTKFAQGTPAGDDITMVIVKR
                     LAEASAVAAGVA"
BASE COUNT         2780 a         3340 c         3339 g         2402 t
ORIGIN      
        1 taaaggaagg aaatgaacga gtcacccaag cctaatgagc agcgccatca gagtcaaggt
       61 tccgctggcc agatgtcttc gcccctcccc acgtgtgggg aggggttggg gtggggttga
      121 gccgcggcca acctctcccc cttcgagttc atttactttt cacggcgcgc aaatcgataa
      181 tggcgcgcaa tgagagcgtc acaaacttac gacgttgctg tcatcggcgc tggcgcgttc
      241 ggcgcatgga cggcgtattg tctgcggcaa tccggcaaac ggattctgtt gattgacggg
      301 tacggtccgg gcaacagccg ctcaagctct ggcgatgaat cgcgcatcat ccggatgggt
      361 tacggcggcg acgagattta ctcgcggtca gcgtggcgat cgctacaggt atggaaggag
      421 ttgttcgcgc acactggtga gaagctcttt cacaagactg gcgttctttg gctggcgcac
      481 gagggcgacc cttacccggc cagcaccttc gagactctga caaacctgcg catccccgca
      541 gaagaactga ccatccagaa actctcaact cgctatccgc agatctgcca tgaaggaatc
      601 ggcggcgcgt tcctcgaacc cgagagcggc gtgttgctgg cgcgacgggc cgtgcaggcg
      661 gtcgtgcgcg aggcgttgaa atccggagtc gagtatctac aggactcaat cgaatcgccc
      721 aataatgcgg gacgcgtcga caagcttgtc accagcggtg gtgaacgtat ttcagcagcc
      781 gtttacgtat tcgcgtgcgg cgcatggcta ccgaaaatct ttcctgacct gctcgcggag
      841 agaattcatc cgacccggca ggaagttttc tatcttggcg cacccgcagg aaagcgtttt
      901 caatcgccgg ctctgccggt gtggattgat ttcaaaaatg aagcttacgg cctgccggac
      961 attgagggcc gcggcgttaa agtcgcgatc gatcgtcacg gtgaagcatt cgatccggac
     1021 acgaacgatc gcgtcgcgag ccgtgaaggt ctggccgaag tgcgccggta tctggcgcgg
     1081 agagttccgg aacttcagga cgcgccggtg aacgagtccc gcgtctgcca atacgaaaac
     1141 acttcaaacg gcgacttctt aatcgatcgc catcccgatt ttgagaatgt gtggctggtg
     1201 ggcggtggct caggtcacgg tttcaagcat ggcccatttg tgggcgaata cgtggcggca
     1261 agaatcgaag gacgagttga aggtgtcgag ccgagattta gtctggcgac gaaatcgaga
     1321 gagcatcaaa gaatcattta ctgaacagca actggctgcg caggttgcaa gtccgaaatc
     1381 aagcaacagc gcgtaagcgt ccgtgacgcg ctggattgcg ccggtgaaaa atagcttgac
     1441 agcctctgaa cgtcggcata tcgtgcgcgg acttaacttt actcggtatg acgtgcgact
     1501 cccgacaagc ctcacgttca aaccgagtcg ctaaatatct gcggcggtcc attaaacaac
     1561 tgaaaggtcg agtcaagaaa ttgacgtgga gcaagatgaa cttaagaact gagttcgtgc
     1621 ttgctttaaa gacgcaccgc cgctgcccac cggccacgtt gtggtctggc gcgtcggggt
     1681 taatactttc ttgctcaagc caaaaggcgt tgacaaagtc gcttcgacca tcaatagact
     1741 attgaccact cgtgagacga aacggaagta ggaaatgagg gataggacga acgaaatgaa
     1801 aggtgagttt attcgatcaa acattcgttt cttgagaaca ctccaagtca ttggaggaat
     1861 tactatggtc ctgttgacac ttcagagttt cgcggctatc ctcgaccgcg ttgaaagtta
     1921 ttttggctgt tgcagtattc gcagtgcctc acgtgttttc acgtagctcc cgtaatctca
     1981 cgtagtcgta gcattttctt ctcgcaaggg cacgctcatt cggcaaagcg ctaaacatca
     2041 cctcgactag cgcaggcgcc gattctcatt tcccgctaag ccaataagac tagagtttta
     2101 gagtgtacga gcggactttg cactacccgt gtgaatatcc ctgttcaacg cctaagggct
     2161 tcacgactta atcagacagt tagaaggtta actatgaata aaagattgct tgccgtgacc
     2221 gtagttttgc tctgcgcaat catcgcgacc gcgaccgcgc ttaccgtcaa gaatatggtt
     2281 agaccgaaag tcgcaattaa cgcgacgact acgcgtgcca agtcaccggc aagcggagat
     2341 gttcacccat cggctctcgc acccgctgct ctaaaaccgc aaggacagat aaggccgacc
     2401 actgacgacg tggctgacta tgtcgtgtat tggcatttgt tccatcacaa caatcttctg
     2461 ctcaagaaag cccaagagac cgagagcctt ggccaggacg gctctttcat gcgggaattc
     2521 tacaaaaaca aagccaagtt agacgacaca caaaccctaa cgttcaatga aatttcagcc
     2581 aaatgcgaga gtgatgtcaa agcgctcgac gacgaagcga aagtgatcat tgctcacttc
     2641 cgcgcccggc atcccggcgg agtgctacaa caaggcgaaa cgttaccccc accgccgccc
     2701 gcgctggcgg cactacagca gcgtcgtaac gacgcaattc tccgggcgcg cgaccggctg
     2761 cagcagcaat ttggcgaaac ggccttcgca aattttcaga cgtttgtgca ggagaaggtc
     2821 gcgtcacaaa tcaaacggaa gcccttaaat actctgcgcc cggcaatgcg caacggcgaa
     2881 caacggcagc cgcgaggtat cccaaacaag gtccagcgat aaaccgagtc gtccttacga
     2941 agtccaggaa ataagagcgc acgggcgcac agcggccgac acacattctc acctcaagga
     3001 actcaaaaaa tgcttagacg aactaccttt tgcgctctca tttttctagc gctctgtgcc
     3061 ttcttcgctg tgaacgaaac aaaggcgcaa acggtttggg gaatttcggg gtacgactac
     3121 gatcagaacc agcatcagct ctacggctac cattcgaccg aagtcgatta ctgggcgtgg
     3181 ctctactatg acgtttacgt cgaaggcgtc atctccgatc agtacggcag cgagcttgat
     3241 ttcgactcgg acttcgatgg caacatgaag gctgaggcct acacgcaagc gacctatacg
     3301 cccggcgaat attactacgt aatcagtgat cactggctgg tggcttatta ctccgaacct
     3361 gctcccggcg gcggaggcgg ctcgtattgg aatccgtttg ggtacggctt ctcaccggga
     3421 ggcgggtacg gaggcttctt tggtttttca ccaggaaccg ggggctacac ttacagtcaa
     3481 tacatttatc tcggctggac cggttgggag ctgtactttt atggcgagcc ccatatcgat
     3541 cagatggtcc cgaccagcgc gccactgggc caatcaatcg aagtcaactt cgagggcacg
     3601 agcttcggca ccaatccaac gatcaacgtc agcggcagcg gaatttccgt gggtagtccc
     3661 actttttcca ccgacacaag gctcaccgcc atattcaaca ttgccgagaa cgcgtctacg
     3721 ggcaaccact ctgtcagcat tacaaccagc gaaggcgtta cgagcaacag cgtcaactta
     3781 aatgtcggtg atcgcacgcc agtaatcaat agcatcaacc cgtcaaatgg cgacgccggc
     3841 caggtagtcc cggtgacgat cagcggtaca ggcttcggca gtacgccgat cgtggatgtc
     3901 accggcggga tcaatgttca gatcacgtcg cgcaacaaca cgcaaatcac ggcgaacttt
     3961 acgattcctt cgaacacgac tcccggtaat catgaggttc gagtgacctc aaatggatac
     4021 ggagggacgg gattcatcag cggaggcggc agctcgtcca cgagcaacgc agtaaatttc
     4081 acggtcaacg cccaggcagc gccgcacatt actagctatg cgccgcaatc gggacagctc
     4141 gacacgtcca tcgagattaa tgtcatcggt gaaaacttca ccaacaatcg gaccctgcaa
     4201 atcagcgggc aaggcgtaac ggttcagagc tatacgaatg tggccgatcc cgatcatcag
     4261 atagtggcca tcttgaatat cgccgaaaac gcggagaccg gtaatcacgc gatcagtgtt
     4321 tccaccggca cgcagacgag taacagcgtc aatttccagg tgggcgatca gactccgaca
     4381 atcaccagca tcactccgcc cagtggcacc aaaggcacta acactcaagt cgtgctgacg
     4441 gggcgtggct ttggtataaa tccgcagctc gccatctccg gcaccggagt caacatcaca
     4501 attaactcgg cgactgatac gagaatcaca gcgaacttcg caatctccgg gttggctgag
     4561 caaacgatcc gccaagtcac cttaacttcg cagggcatca gtggaagtgg gttcatacag
     4621 tcgccgggcg ccacgcctaa cgcgcaggca aactttggca tcgatgccgc gaaagtgaag
     4681 attaactccg ttgacaagcg attcgcgccg agcgtggagc gactgaatgt gaactacacc
     4741 attacacccg tcggttacaa cgcccccgta ggccggctgg agatctttaa gaagggcgat
     4801 accaccaatc caatctaccg agacaccagt atcccgaccg gcggcaccaa cgtccaatat
     4861 acgcaaggcg gcactcccgg ttgggacgga atggcgaaca tgggcgccgg cgcaggtaag
     4921 tttgtcggcc ccgaagactc gcctttcacg gtgcgcgtga ccatcgccgc tgatggaagc
     4981 ttcggcacca ccaagatgga ccagaaggaa ttcaaggtcg agctggattc catcgagacg
     5041 acgccgaaag acaacaacga atacaacatc gtcaagccgc agccgacgac gccgccggtc
     5101 ccggctcaga caccggagat cgcgactgaa gtaaaagtag tgatcaagct gaagaacaaa
     5161 gccggaaccg gggttcccac cgcgatcccg ttcaagctga actggagctt tgaggatccc
     5221 gacgacacct ccggcaagaa tttggtcgac ccgaacgggt ccaccggcga cgataacgcg
     5281 ccgatttcga atctaggcaa gcgcggaccc ggcagcatta tgtggagggc ggtaaccggc
     5341 accaccacgg ccgttgatcc ggcagggcgg accgcggtgt ctgacgcgat agtcacgccg
     5401 ggtcccgatc tgggctccgc gaagattagc ttcctgagct cgaatgtcgc cgctgacaac
     5461 tacattctaa agttggaagt aaaaaacagt gccggcacgc tcgtgaagga agtcaagttt
     5521 aagaagtggt ctgttcgcaa ggccctcacc ttcacgagat tcttcaagat gcagaatggt
     5581 gtcgatgtga agagtgtcgc ctcatacgac aacgtccatg aggcattcga cgaggacggc
     5641 tataccgatt acacgaccgg ccaaaaccag acgaacttga ccgcggcgca gtcgcccgag
     5701 tttgcggtcg cgttgttggc gccgaatgcg gcggaaacgc caactaatca agagaaagtg
     5761 gattatgcgg ccggctcggc ggcggcgaaa caggcgattg aaggtaaggc ccaagcctgg
     5821 ttccagcgga actacctcct ccagggaaat gccctggtag cgtatgcagg gaccattggc
     5881 gcgcccgcgt tctctttgat cggttgcagg tttatcagtg agaagttcga cggacggccc
     5941 aatcccaacg gcaccaacca ttacccggct ggaatcacaa tcgtcgggtc ggacggccta
     6001 ccccacgacc ctgatgatga ctggggcgag atcgaaggcg gtgaggtcgg gggctttgcc
     6061 tttattttcc ttaacaccaa gccgatggct cggctcatcg ttgcagctcg ccacgaagtg
     6121 ggccatgcca gtgaccatga gttgttcgga ctggaggatc acgcgctctc cggactgatg
     6181 cacaagaacg ccgatcaggg acctaatctt ccttacggca atgagaactt caacgaagat
     6241 agtattttga gacttagggg atggagccgc tgaaatgacg aagaataagc tttttacacg
     6301 cgcgatccgc agtattgcaa ttgttgccgc tctgctgctg gtttacggcg gctggcgagc
     6361 agccggaatt tccgtcagcg cgcagtcatc ccctttcact ctggcagtga gaccggtcga
     6421 cgcggttacc ggcgccacga agacgagttt ctttgtcggc gagacggttg ccgtcgtgct
     6481 cactgttacg aatcaaagcg cggtagcgca gaccatcacc gatctggagt caacagaaat
     6541 accggtgact ctgaccgcaa ttccaaaccg ctcagacaga cctgacgtgc gcaccggcac
     6601 acgcgggggc gccggccgga cggtccagga cagcgccggc aacgtctttt ggtccagcgc
     6661 tcccaagcag aatgtggtgc tggcccctgg tcagtcgctt tctgtgacga taaacgatgt
     6721 cagccgtttt tttgccagca agctggacga cggcacttat acgctttcgg ccacctacaa
     6781 cggaattgtt caagcgcaga ccagcttcac ggtcttcata gaccaggctc aaagcgttcc
     6841 ggttttacaa caaatggcgg ctggtcaaaa cgatctcgat cgacgctggg cccttaccta
     6901 cctcgatatt atccagaaac cctcgatcag cggacgcgtt gtgaacagca gcggcgcgcc
     6961 actcggtggc gttacgctgt atgtcacggg ctctctgacg agcaacctct ccacgctggc
     7021 ggatggaaga tatgatctga tgcaactgac gtcgggcggt tcgtatacgc ttactcctgc
     7081 tttggagggc tatacgcttg cgccggcgac acggacgttt tcaaatctca ctaccaagca
     7141 agtggatgtg aatttcacgg ccacgcgcgt cggcgacgga gttaaccttg cggtcgacgc
     7201 taccgttacc gcttcctcta ctttggacga cgactaccgg gcggagagcg tcattgacgg
     7261 ctccacctcc ggtgtcggct ggggcatggg cagtggtggc tgggaagatg gaaccctgaa
     7321 cgcttttccg gactggattg aagtcaactt cggggccgcc aaggcgattg attggatcaa
     7381 cgtctataca cttcaggata atttcaccaa ctcggtcgag ccgacgataa ctcagacctt
     7441 ctcgctatat ggcattacag actttgacgt gcagtattgg agcggctcaa cctgggtaat
     7501 tgttccgggc ggcgcagtca acggcaacaa caatgtctgg cgcaagttta ccttcccgac
     7561 tgtcacgacg accaaaatca gagtgttcgt cagaaacggc ctcgccggca aaagccgcat
     7621 cacggaaatt caggcgttcc atcaaaacgt gccgcccacg gtaagcatca cgggtaacta
     7681 tcagggtgct cccggaacca cttttcagtt caccgctaat gctgctgata gcgacggcac
     7741 gatcagccgc ctcgactggg attttggtga cggcgctacc gccactggcg cgaatgcatc
     7801 gcacacttat cccactgctg ggacctttac cgcagccgtg gttgtgactg acgacggcgg
     7861 tgaaacagcg agggccacca aaacggtaac catcacagcg ttgccacaac cgccgactgc
     7921 ttcggccggc ggcccctata acggcgtcgt cggcagtccc gtagttttcg aaggacgtgc
     7981 gtcatttgat cccgacggat cgatcacaac ttatcagtgg aacttcggcg acagcacgag
     8041 cggaacgggc ccaacgcctt cacatactta tgcgcagact ggaacctatt ctgtgacgct
     8101 cgtagtcacc gacaacagcg gcagcaccgc cagtcaaacg gcgattgcca ccatagcgac
     8161 cggtccgcct gcgaaggctt cgcagacaat tacatttaat gcgccggcga acaaaaccta
     8221 cggagatgct ccgtttgccg tcagcgcctc atcttcttcc ggtttgtctg tcagtcttgc
     8281 aattatttca ggaccggcga ccatttcagg aagtagtgtg actattaccg gcgctggtac
     8341 tgtcacgata cgcgcctcgc aggctggcga caccaactac aatgctgctg cgaacgtgga
     8401 gcgtagcttc acggttgcca aggcggcagc ctcgatcacg ctcagcaacc tgaaccagac
     8461 ttacaatgga acgccaaggc ctgcgactgc cacaaccact cctgccgggc tcgctggcgt
     8521 ttcaatcaca tacaccggct ccgcgacagc accgacaaac gtgggcagtt actcagtgat
     8581 tgcttcgctg acaaatgaca actacacggg caatgccacg ggcacgcttg tcatcgctaa
     8641 agctgcagcc acgattgccc tcagcaattt gaatcaaact tacaatggtt cgccaaggcc
     8701 tgccacggcg accaccactc ctgcaggact cagcggggtt tcgatcacgt acaacggttc
     8761 tgcgacagcg ccgatcaatg ctggtagcta ctcggtagtc gcggcgctga ataaccaaaa
     8821 ctacacggcg accaatgcaa ctgccacgct ggttatctct gagggaggta gtggtccgca
     8881 gcccgtcacc tggactaaca cggtcggtgt cacagccaat ggcaacagtc tgaccaagac
     8941 ggcgtcagag ggttggggca atgcgggtgc ggcttcaact cagactattg cttcgggcga
     9001 tgggtatgtt gaattcacgg ccacggagac gaatacttac cgcatgattg ggctcagcaa
     9061 cggtgacagc aatcagaatt accctgatat tgactttgcc atctacccgg caataggggc
     9121 gacgcttgac atccgcgaag gcggcgtgtc ccgagggacg tttggcagct acgctacggg
     9181 agacacactg cgcgtagcgg tggaaggcgg ggtggtgaag tatcgcaaga acggggtttt
     9241 gctttacacc agcgcaggca cgcccactta tcccttgctg gttgacactt cgttctactc
     9301 gaacggcggc acgatcagta atgtgatgat ttcgaccggg tcttccggcg gcgagagcac
     9361 gcagaacgtg agttggacga acacggtggg cgtgtcggct tccggcaaca acctgacgcg
     9421 gacagccgcg ggcgatgcct ggaacgctgg agcagtttcc actcagatga tctcttcggg
     9481 cgatgggtat gttgagatca cggccagcga ggcgaataag aagcgtgcat tcggcttgac
     9541 taataacacc tcggtcacga cctacccgca taacgtctat ggcatgcatc tgagtgagac
     9601 tggccagatc acgattcacg agggcgacgg cgtttacggt gtctttggca cctacaccag
     9661 cggcgacgtc ttgagagtgg cgatagaagg tggggtggtg aagtatcgaa agaatggcac
     9721 gttgctgcgc acgagtacac tcgcgccgac atatccactg cgggcaggtg cggcgctcta
     9781 taccaacggc agcactgtga acagtgcggt gctcagctca ggcggcggcg ggacgagtac
     9841 gcagactgcc agctggacca actccgtcgg agtcgcggtg aatggcaaca atctcactaa
     9901 gacggcggcg gaaggctggg gcaatgcggg cgcgtcttcc actcaatcaa tcgcttcagg
     9961 tgacggttat gtcgaaacga cgatgagcga aaccaatatg taccggatga ttggtttgag
    10021 taatggggac agccaccaga actacaatga catcgacttt gcattctatc cggccatagg
    10081 tgcaacgctt tacatctatg aagggggaac ttcaagagga acttttggta cttacgcgag
    10141 cggcgacgtc ttacgcatag cagtcgaagg tggggtggtg aagtatcgca agaatggcgt
    10201 gttgcttcat accagcgcgg tggctccgag ctatccgctt ttggtggaca cggccttcta
    10261 ttcgccgaac tcgaccatca acaacgtgat tatcagcggg aatctgagtg gcggcggtgg
    10321 tggttcggca cagcttcgct gggtggtgac ggatcatttg ggcatgccgc gcctagtgtt
    10381 cgatcagacg gggtccgtgg ccaatgtgag cccgcatgat tatctgccgt ttggtaagga
    10441 gttgtttggt ggtccgccga gccacccggg agtaggcgga cggacgacaa cgatgggcta
    10501 cagagacgcg caccccaaaa gctggcccag gataatatat gattttgggc ttttggaggg
    10561 aggcagaaga tagtctgtca atgtcgctca ggctggcacg cacacactct acgcgcgaat
    10621 tgcctggggt ggtgtacctg gcggcacatt ccacattgaa gttgatggag ttgaggtcgc
    10681 tggcaatgat ctccaacccc cctgtccctc ccgtccggtt tgcacactct caaagtagtt
    10741 gccgacacga acgggaccaa ggttatgcgg gagacattga ttacttatat ttccgactca
    10801 atccgtgagg ggctggctgc tatgctacgc cggccgctac tgccgaggct tcagccagtc
    10861 gcttcacaat caccatcgtg atgtcgtcac cagccggtgt gccctgggca aacttggtga
    10921 gggcggattc gattcgatcg cgaatgccgg ccgcggaagc gtcgagattg cgcgcgacgg
    10981 cttcgtacaa acgcgtcggc ccgaattctt cgccggtcgg actggtcgct tcagaaactc
    11041 catccgaata aatcaccagc acatcgccgg ggttcaaggt cgtgcgacct tcgcgaaaat
    11101 ccgcatccgc catgattccc agcggcaacc ccccggccgc cagttgctcc atcgtgccac
    11161 tggcgtggac gataagcggt ggattgtggc ccgcgttaag aaacgccagc tctcctgtct
    11221 tcggattcag atcggcataa aacagcgtca caaagcgatt ggccggaatg ctctcgacca
    11281 gatagcgatt gattgacgag atcgtttcgg ccagcgagcc gtgcgtgtcg aactgtgcgt
    11341 gcaccgccgc atgcagtgac gacatcaaga gagccgcgga cgtgcctttg ccagacacat
    11401 cgccgagcgc cacgactaaa ttgccattgc gcttgtgaat gaagtcgtag tagtcaccgc
    11461 caatttcgta acacgggaaa ctaatgcctt gcagttcgta acctggcacc tgcggcgcgg
    11521 acgccggctg aaagcgctgc tgaatctcac tggcaacctg aagttcgcgc tcgagtcgtt
    11581 cgcgttcgaa ctgctcttcc gtgagccgcg cattctcaac gcgaatcgcg gcgaccgacg
    11641 ccagcgtcgt caaaactttc aggtgatctt ccgtgaagcg gccttcggca atcggcgagt
    11701 ccgcatagat gattccgaag acgttctcgc cgacgcccaa cggcaccgcg agcaccgaac
    11761 gcacgccctg caggacgact gtgccgccca taaagcgcgg atccgactgc gcgtcggaag
    11821 tcagcacgga tttaccgttg ttgacgactt catcgatgac t
//
LOCUS       DATDBY010000554         3813 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2367394, whole genome shotgun sequence.
ACCESSION   DATDBY010000554 DATDBY010000000
VERSION     DATDBY010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3813
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2367394"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VIT19_10375"
     CDS             complement(<1..443)
                     /locus_tag="VIT19_10375"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY5839429.1"
                     /translation="MSDFVNIKFEVQERVARVTFNRPPLNVLNIAMMREINAALNDCV
                     QQRGLAAIVFDAAKGTRAFSAGVAVEEHAPATVFQMLDSFHGIFRTLQQIAKPTIAVV
                     DGPALGGGCELVAACDMVLASDRAKFGQPEIKLGVFPPVAAILLPA"
     gene            complement(450..788)
                     /locus_tag="VIT19_10380"
     CDS             complement(450..788)
                     /locus_tag="VIT19_10380"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY5839430.1"
                     /translation="MPTINAETAQGSKTIEGTAGRRLVLVLEDGGVDILHRCGGNARC
                     TTCRVEVLDGSAPPMGETELECLTLRGALEEGFRLSCQIRVAGDMHVKVLKQVSTEGM
                     DAGPRPEEWD"
     gene            complement(891..2924)
                     /locus_tag="VIT19_10385"
     CDS             complement(891..2924)
                     /locus_tag="VIT19_10385"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEY5839431.1"
                     /translation="MNPKRFFAILFAVVVIAVGAVTAQEGSKPKADPEPRAKDGKKLL
                     TAVDLLKINGVGAPRISPDGARVAYTVSEIKMEKDKEWKSLTQIWVIPAGGGQARQYT
                     RGEKNATAPEWSPDGKLIAFLSDREKDGERQVWMMRADGGEAWVVTAHKGGVTGFRFS
                     PDGKRLILTAVDQPNKDEEDRKKVKDDTIVMDRDIKMTHLWMFGIDKKEEKRVTEGAF
                     TVSDPQWSPDGTRITYVTRPTPKADDGGLSDIWMLTVASGEKKEIVGDEGSSDSARWS
                     PNGEWIAYVGSPDGGLGVSKADLYLLPAAGGAARQITAKFDLDAGTPVWSPDGKLIHF
                     SANSRQGNELFWLDVASGVAKQVTRLGGSINIVQITRDGRAVGTMATAYRPAEVYVTN
                     SQSVYNPITAHNSWLKDYSIAQSEVVKWKSKDGTEIEGVLTKPVGHSSGKVPFLLNPH
                     GGPTGASLTSWNGTVQVLAANGFAVLQPNFRGSTGRGLAFAQANKNTWGKGDFEDCMT
                     GVDAMIAGGIADPDRLGAFGWSYGGYMTFWILTQTDRFKAVSPGAGLTNIYSMYSQND
                     IQRYLRWFYSDKAPWDATDLYWDRSPMKYINNVKTPTMIMHGQADTRVPLAQAQEFYM
                     ALKEKNVPVEFVVYPREGHGFTEPRHNLDRMRRYVRFFARYLKAPVVTEPAGQ"
     gene            complement(2997..>3813)
                     /gene="hutU"
                     /locus_tag="VIT19_10390"
     CDS             complement(2997..>3813)
                     /gene="hutU"
                     /locus_tag="VIT19_10390"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR01228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016153 - urocanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HEY5839432.1"
                     /translation="SYVQRSMESMAVHVEAMLALKRGGAVAFDYGNNIRKMAFEAGAQ
                     DAFEIPGFVPEYIRPLFCEGKGPFRWVALSGEAEDIRKTDDLALELFPDDQTLNRWLR
                     LSRDRVKFQGLPSRICWLGYGERAEMGEAINELVKRGDLKAPIAIGRDHLDTGSVASP
                     FRETEGMKDGSDAVADWPILNALLNTASGASWVSFHHGGGVGIGYSLHAGQVSVADGT
                     AEAAKRLNRVLTNDPGLGVARHVDAGYEEAADTARKKGVKIPMKSEPPAVAGG"
BASE COUNT          745 a         1174 c         1038 g          856 t
ORIGIN      
        1 gcaggcaaga gaatcgcggc gaccggcgga aagaccccga gcttgatttc aggctgtccg
       61 aatttggcgc gatcgctggc aaggaccatg tcgcaagccg cgacgagttc acatccgccg
      121 cccagtgccg gcccatcgac gacggcaatc gttggtttcg caatctgctg aagcgtgcga
      181 aagattccat gaaagctatc caacatctgg aacacggttg cgggcgcgtg ctcttccacg
      241 gcgaccccgg cgctaaaagc gcgcgttcct ttggcggcat cgaagacgat cgccgccagg
      301 cctctctgct gcacgcaatc attcaatgcc gcgttgatct cgcgcatcat cgcaatgttc
      361 agcacgttca gcggcggacg attgaacgtg acgcgcgcca cgcgttcctg aacctcgaat
      421 ttgatgttta cgaaatctga catgtccgat taatcccact cttccggccg cggtcccgca
      481 tccatgcctt cggtgctcac ctgtttcaaa acttttacat gcatgtcgcc cgcgaccctg
      541 atttggcacg agagacgaaa gccttcttcg agcgcgccgc gcagggtcag gcattcgagt
      601 tcggtttccc ccatcggtgg tgcgctgccg tccagcacct ccacgcggca ggtggtgcag
      661 cgcgcgtttc cgccacagcg gtgaaggata tccaccccgc cgtcttccag caccagcacc
      721 agacggcgcc cggctgtccc ttcgatggtc ttactaccct gagcggtttc tgcgttgatt
      781 gtcggcatta aagaaactcc tgcgatctga atttagtaaa agcgtgactt gaatctggca
      841 tcttgaatct taaatcagga atttgaaatg cagaattcga cagaattctg ctactgccca
      901 gccggctcag tcactaccgg ggcctttaga tacctggcaa agaatcgcac gtaacggcgc
      961 atgcgatcca ggttgtgacg cggctcagta aacccatgac cctcgcgcgg atagacgaca
     1021 aactccaccg gcacgttctt ctccttcagc gccatgtaaa actcctgggc ctgcgcgagc
     1081 ggcacccgcg tgtccgcttg tccatgcatg atcatcgtgg gcgtcttcac gttgttgatg
     1141 tacttcatcg gcgaacggtc ccagtaaaga tcggtcgcgt cccagggcgc cttgtccgaa
     1201 tagaaccagc gcaggtaacg ctgaatgtcg ttctgcgaat acatcgagta gatgttcgtc
     1261 aggccggcgc ccggcgaaac ggctttgaag cgatcggtct gggtcaggat ccagaatgtc
     1321 atgtaaccgc cgtacgacca accaaacgcc ccgagccgat cggggtcggc gataccccca
     1381 gcgatcatcg catcgacacc ggtcatgcaa tcttcgaagt cgcctttgcc ccatgtgttt
     1441 ttgttcgcct gagcgaacgc caagccacgg cctgtcgagc cgcgaaagtt tggttgcagc
     1501 accgcgaagc cattcgccgc cagcacctgg actgttccat tccaactggt cagcgacgca
     1561 ccagttggtc cgccgtgcgg attgagcaag aagggaacct tgccggacga gtgtccgacg
     1621 ggcttagtga gcacgccttc gatttccgtt ccatctttgc ttttccattt gacgacctcg
     1681 gattgggcga tcgaataatc tttcagccac gagttgtgag cggtgatcgg attgtagacg
     1741 gattgagagt tcgtgacata gacttctgcc ggtcggtacg cagtcgccat agtgccgacg
     1801 gcgcggccgt cgcgagtgat ttggacaatg tttattgatc caccgagccg cgtcacttgt
     1861 tttgccacgc ctgaagcgac gtccaaccaa aaaagttcat ttccttgacg cgagttcgcg
     1921 ctgaagtgaa ttagtttccc gtcgggagac cagactggcg tgccggcgtc cagatcgaac
     1981 ttcgcggtga tctgtcgcgc cgcgccgccg gccgcgggca atagataaag atcagctttc
     2041 gaaacaccca agccgccatc cgggctgccg acatacgcga tccattcgcc gtttggagac
     2101 cagcgtgcgg aatcgctcga gccttcatcg ccgacgatct ctttcttttc gccgctggcc
     2161 acagtcagca tccagatatc gctgagaccg ccgtcgtctg ctttcggcgt cggccgggtt
     2221 acgtaagtga tgcgcgttcc atccggtgac cactgcggat cgctaacggt gaaggcgcct
     2281 tcggtgacgc gtttctcttc tttcttatcg ataccgaaca tccagagatg cgtcatcttg
     2341 atgtcgcgat ccatgacgat cgtgtcgtct ttgaccttct tgcgatcctc ttcatccttg
     2401 ttcggttgat cgacagcggt gagaatcagc cgtttgccat cgggtgagaa acgaaatccg
     2461 gtgacgccgc ctttgtgggc agtcacgacc cacgcttcgc cgccgtcggc cctcatcatc
     2521 caaacctgcc gctcgccgtc tttttcgcgg tctgagagaa acgcaatcaa cttcccgtcc
     2581 ggtgaccact ctggcgcggt ggcgtttttc tcgccgcgcg tgtattgccg cgcctgaccg
     2641 ccgcccgccg ggatgaccca gatctgcgtc agcgatttcc actctttgtc tttctccatc
     2701 ttgatttcgc tgacggtgta cgcgacccgc gcaccgtcgg gcgaaattcg gggcgcgccg
     2761 acgccgttta ttttcaagag gtcgaccgcg gtcaaaagtt tcttgccgtc tttggcgcgg
     2821 ggttcgggat cggctttcgg tttagagcct tcctgagccg taaccgcacc aactgcgatt
     2881 acgacaacgg caaatagaat tgcgaagaag cgtttggggt tcatgtgatt ctctccagtt
     2941 atctgaagtc agaaccgcct gcggtagcgg gcggttgatc ttcattactc gcatgttcaa
     3001 ccacccgcta ccgcaggtgg ttctgacttc atcggaatct tgacgccttt tttgcgcgcc
     3061 gtatctgcgg cttcctcata tcctgcatcg acatgacggg cgacgccgag gccgggatcg
     3121 tttgtgagca cgcggttcaa acgtttggcc gcctctgcag ttccgtcggc gactgaaacc
     3181 tggccggcgt ggagtgaata gcctatgccg acaccaccgc cgtgatgaaa tgaaacccag
     3241 ctcgcgccgc tcgccgtgtt cagcaacgcg ttcagaatcg gccagtcagc gacggcatcc
     3301 gagccgtcct tcatgccttc tgtttcgcgg aacggcgacg ccaccgatcc ggtgtcgaga
     3361 tgatcacggc cgatcgcaat cggtgctttc aaatcgccgc gcttcaccag ttcattaatc
     3421 gcttcgccca tctcagcgcg ttcaccatac ccgagccagc aaatgcgcga cggcaggccc
     3481 tgaaacttca ctcgatcacg cgacagccgc agccaacgat tcaaagtctg atcatccggg
     3541 aagagttcga gcgcaagatc gtccgtcttg cgaatgtctt cggcctcgcc tgacagcgcg
     3601 acccagcgga acggcccttt gccttcacag aacagcgggc gaatgtattc gggcacgaag
     3661 ccgggaatct cgaatgcgtc ttgcgcgccg gcttcaaacg ccattttgcg aatgttgttg
     3721 ccgtaatcga aggccaccgc gcccccgcgt tttaaagcca gcatcgcttc aacgtgaact
     3781 gccatcgatt ccatcgagcg ctgaacgtac gat
//
LOCUS       DATDBY010000555         3252 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1280914, whole genome shotgun sequence.
ACCESSION   DATDBY010000555 DATDBY010000000
VERSION     DATDBY010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3252
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280914"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..545)
                     /locus_tag="VIT19_10395"
     CDS             complement(<1..545)
                     /locus_tag="VIT19_10395"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY5839433.1"
                     /translation="MSADKDLISVQQARDLVEAAHRAQTEIARFDQAKIDRICEAMSR
                     AALRESARVAAMAVEETGYGVPEDKQEKNRFAAEDVWNYFKNLRTVGVVSETKDVVEI
                     ASPRGVVAGIIPSTNPTSTAIFKILISIKSRNAIVMSPHPSAARCINETAKAMREAGV
                     KEGLPADAIGCMTTATIEGTET"
     gene            complement(776..1042)
                     /locus_tag="VIT19_10400"
                     /pseudo
     CDS             complement(776..1042)
                     /locus_tag="VIT19_10400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183618.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="BMC domain-containing protein"
     gene            1304..1786
                     /locus_tag="VIT19_10405"
     CDS             1304..1786
                     /locus_tag="VIT19_10405"
                     /inference="COORDINATES: protein motif:HMM:NF024252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY5839434.1"
                     /translation="MATGIGEKLRLEREARGIALRDISEQTRISMRYLEAIETEDYRR
                     LPGGIFNRSFIRAYAKFVGYDEDKAIEEYGNTMREHGQSEDEPPKHQRSTVYTDDGGH
                     YGRSPMKTLFLAIVILALLSLAVWGGLYLYQKRVAGQNRGATPPADMQMKEEQHGVNV
                     "
     gene            2035..>3252
                     /gene="guaB"
                     /locus_tag="VIT19_10410"
     CDS             2035..>3252
                     /gene="guaB"
                     /locus_tag="VIT19_10410"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: protein motif:HMM:TIGR01302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEY5839435.1"
                     /translation="MITENVAEGLTFDDVLLVPARSDVLPTETDTSTQFTRGIRLNIP
                     LCSAAMDTVTEASLAIAIAQQGGIGVMHKNLSIERQAEEVDKVKRSESGMIVDPVTIP
                     QDRPVREALNVMERYHISGVPVVDEDGHLVGIITNRDLRFETRFDLPVSEVMTPQPLV
                     TVPVGTTLDQAKAVLQEHRIEKLLVIDDDKHLKGLITVKDIQKAIKYPTAAKDDLGRL
                     RVAAAIGATGDYQARAAALVEARVDCLVIDTAHGHSLRVIEAVREIKRRHPDTQLVAG
                     NVATGDGTRELIDAGVDAVKVGIGPGSICTTRVVTGAGVPQISAIQSAVEAARGTGVP
                     IISDGGVKFSGDMAKAIAAGADVVMIGSLFAGTEEAPGEVILYQGRSFKMYRGMGSIG
                     AMREGSSDRYSQER"
BASE COUNT          675 a          915 c          987 g          675 t
ORIGIN      
        1 gtttcggtgc cttcgatggt cgccgtggtc atgcagccga tcgcgtcggc gggcaggcct
       61 tctttaacgc ctgcctcgcg catggctttg gcggtctcgt tgatgcagcg cgcggccgac
      121 ggatgcggcg acatgacgat cgcattccgc gacttgatcg aaatcaggat tttaaagatg
      181 gctgttgaag tgggattggt cgagggaatg atgcccgcga ccacaccgcg gggactggct
      241 atctcgacaa cgtctttcgt ctcgctgacg acgccgacgg tgcgcaggtt cttgaaatag
      301 ttccagacgt cttcagcagc aaaacgattc ttttcctgct tgtcttcggg aacgccgtaa
      361 ccggtctctt cgaccgccat cgccgcaacc cgcgccgact cgcgcagcgc ggcccgggac
      421 atggcttcac agatgcgatc gatcttcgcc tgatcgaagc gcgcgatttc cgtttgcgcg
      481 cggtgagcag cttcgaccag gtcacgcgcc tgctggacgg aaataagatc tttgtcggcc
      541 gacatgacac aaaactcctg agcttagagc tttgtgctta gtactttgaa ctcgcgattg
      601 tgtctcgcaa agaaccaagt tccaagttca aagctcgaat tacttacttc gctcgttctc
      661 tcgcgccttc acgcgacgtc aacgagcggc cggcctcgcc ctggcccaac tgtccgcgcg
      721 cgccgccgct gagttgcgcc tgctcgtccg ggctgtaacc tgcgcggccg ccgaccggca
      781 ggacgcgttc gacttctccg tgcggccgcg gaatcacgtg cacactgatc aattcaccca
      841 cccgccgcgc ggctgctgcg ccggcgtccg ttgctgcttt gactgcgcca acatcgccgc
      901 gcacgaatac agtcacataa ccggcgccga tgtattcctt tcccaacaaa gtcacgttcg
      961 ccgctttgac catcgcatcg gccgcttcaa ccgcgccgac gaagcctttg gtctcgacca
     1021 ttccgagtgc ttcaagaggc atttctgcat cctcactttg taattttaga agttaaaaag
     1081 aaacccgatt gcacctcaag ctaccacccc gcgcgtcaag aatcaagaaa ggcattccca
     1141 taaaatcaac aaaaatttga cacctttttg gtcgggggtt atagtgcgcg ccaagaagca
     1201 cgcccgtttg tggacgggtg tgagaacgcg caaagggcgc gattgattcg cgggttcaga
     1261 accgcctacg cagtgaattc ggcttccgtt ctggtcgatt aagatggcaa ctggcatcgg
     1321 agaaaagctg cggctcgaac gcgaggcgcg gggtattgct ctgcgcgaca tctcggaaca
     1381 aacccggatc tccatgcgct atctcgaggc catcgaaacc gaggactatc gtcggctgcc
     1441 cggcggaatc ttcaatcgca gcttcatccg cgcgtatgcg aagttcgtcg gctatgacga
     1501 agacaaggcg attgaagagt acgggaacac gatgcgcgag cacggccagt cggaagacga
     1561 accgcctaag catcagcggt caacggtcta taccgacgac ggcggacact atggtcgttc
     1621 accgatgaag acgttgttcc tggcaatcgt tatcctggcg ctgctgtcgc tggcggtttg
     1681 gggcggattg tatttgtatc aaaagagagt ggccggccag aaccgcggcg cgacgccccc
     1741 ggcggatatg cagatgaagg aggaacagca cggcgtcaat gtttagacgc gaggcggaaa
     1801 agctctgcgc gagtgcgcag tgtgccgcgc gtgtgtggtt caaaccagaa tggcagttgc
     1861 ccgcgaggtc gcgggcattt ttgttttcgg ccgcgcttga tttagtggat gttagagtac
     1921 cgactttagt cgggtctttt tcaatgcgcg aaaggcccga ctaaagtcgg tactctaacg
     1981 ccggcggtcc ccaactttga gaaatgaatt cgagggagta attttgaaga aaatatgatt
     2041 acggaaaatg ttgctgaagg actgacattc gatgatgtgt tgctggtgcc ggcgcgttct
     2101 gacgtgctgc cgaccgaaac cgacacgtca acacaattca cgcggggcat tcgtctgaac
     2161 attccgcttt gctcggccgc aatggacacg gtgactgagg cgtcgctcgc gatcgcgatc
     2221 gcgcaacagg gcggcatcgg ggtgatgcac aagaacctca gcattgagcg ccaggccgaa
     2281 gaagtcgaca aagtgaagcg ttcggaatcg ggcatgattg tcgatccggt gacgattcct
     2341 caggaccggc cggtgcgcga agcgctcaat gtgatggagc gttatcacat cagcggcgtg
     2401 cccgtcgtcg atgaagacgg acacctggtc gggatcatca ccaatcgcga tctgcgattc
     2461 gagacgcgat tcgatttgcc ggtttcagaa gtgatgacgc cgcagccgct cgtcactgtg
     2521 ccggtcggca ctacgctcga tcaggcgaag gcggttttgc aggagcatcg aattgagaag
     2581 cttctggtga tcgatgatga caagcactta aaaggtctta tcaccgtcaa agacattcag
     2641 aaggcgatta agtatccgac ggcggcgaaa gatgatctcg ggcgtctgcg ggtcgcggcg
     2701 gcgatcggcg cgaccggcga ctatcaagca cgcgctgctg cgctggttga agcccgcgtt
     2761 gattgtttag tcatcgacac cgcgcatgga cattccctgc gcgtgatcga ggcggtgcgc
     2821 gaaatcaagc gtcgtcatcc ggatacgcaa ttggtcgccg gcaatgtcgc gaccggcgac
     2881 ggcacgcgcg aactaatcga cgccggtgtg gacgcggtga aagtcggcat cggccccggc
     2941 tcaatttgca cgacgcgcgt agtcaccggc gcgggggtgc cgcagatctc ggcgattcaa
     3001 tcggcggttg aagcggcgcg cggtactggt gttccgatca tttccgacgg cggcgtaaag
     3061 ttttcggggg acatggcaaa agcgattgcc gccggggcgg acgtcgtcat gatcggctcg
     3121 ctcttcgccg gaaccgaaga ggcgccgggc gaagtgattc tttaccaggg ccgcagcttc
     3181 aagatgtatc gcggcatggg ctcgatcggc gcgatgcgcg aaggctcgag cgatcgttac
     3241 tcacaggagc ga
//
LOCUS       DATDBY010000556         2369 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1049170, whole genome shotgun sequence.
ACCESSION   DATDBY010000556 DATDBY010000000
VERSION     DATDBY010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1049170"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1508)
                     /locus_tag="VIT19_10415"
     CDS             complement(<1..1508)
                     /locus_tag="VIT19_10415"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY5839436.1"
                     /translation="MNDLQRYVGQVLDDKYRLERLLGQGGMGAVFLATHLGTDRYVAL
                     KLIAPQLMRNQEFVERFKREARAAGRLRHPNVVDVTDFGFSGNGRDRVAYLVMEYLDG
                     CTLSDVLAEENRLPLYWVVDILEQVCGAVQEAHQQGILHRDLKPDNIWLEPNGLGGYR
                     VKVLDFGIAKLAESGNPLPAITAPSVQLQPTEAAALEAATIIYPSEAAVDDEQATQIM
                     PPAEQQTRVLDSARDTAARPQETVAALGTAASGLTRIGAILGTPLYMSPEQCRGERLD
                     ARSDIYSIGVIAYQMLTGAPPFTGDTSSVIRAHNDLQPTPVRELNKKLPKRVSRMVMS
                     ALEKDREQRPATAIAFANAMRANADSLGTLYRRAFSLYSEYFPEFLKLSLLAHIPTII
                     VTAMAIGFRLAEPSLSKPAAVAIGIPLALLTVASQFVTASIISGVTAIVVTQLAVAPM
                     KPVRLRIAFQILRRRLRPFVSTGIRMAIRIMLGWILFVIPGLVMTARYLLWAP"
     gene            complement(1701..2183)
                     /locus_tag="VIT19_10420"
     CDS             complement(1701..2183)
                     /locus_tag="VIT19_10420"
                     /inference="COORDINATES: protein motif:HMM:NF014119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEY5839437.1"
                     /translation="MRFNLWKAEPPSQAQSPAHFELGRRGEALAIEHLEQAGYRIVAA
                     NFSLPIGRNLRDVVVNAEIDVVAYDGPTLCLVEVKTRASDDFAAPEVNVDLRKRRQIA
                     RAALAYRRMLGLVNEPYRYDVVTLVAKPDGAEPRIQLLKGFWSDAQLKKRKWQEHYWD
                     "
BASE COUNT          487 a          693 c          690 g          499 t
ORIGIN      
        1 ggcgcccaca gcagatagcg cgccgtcatc accaatcccg gaatcacaaa caagatccag
       61 ccgagcataa tgcggatcgc catgcgtatt ccggtgctga caaacggcct cagacgacgc
      121 cgcaggattt ggaaagcaat gcgcaggcgt accggtttca tgggagcgac cgcgagttga
      181 gtcacgacga tcgctgttac acccgaaata attgacgcgg tgacgaactg cgacgcaacc
      241 gtaagcaacg ccagtgggat tccgatcgcc acggcggcag gcttgctgag gcttggttcc
      301 gcaagccgaa acccgatagc catcgcagtt acgatgatgg tcggaatatg cgcgaggagc
      361 gaaagcttta gaaactccgg aaaatattcg ctgtagaggg agaaggcgcg ccgataaagc
      421 gtgcccaggc tgtccgcatt cgcgcgcatc gcgttcgcaa aagctatagc cgtcgccggc
      481 cgctgctcgc gatctttttc cagcgctgac atcaccatgc gcgagacgcg cttcggcagt
      541 ttcttgttca gctcgcgaac cggtgtgggc tgaagatcat tgtgcgcgcg gatgacgctg
      601 gaggtgtcgc cggtgaaggg gggcgcgccg gtcaacatct gataagcgat cactccgatg
      661 ctgtagatgt ctgatcgcgc gtcgagccgc tcaccccggc attgctcggg cgacatgtag
      721 agtggcgttc cgagaattgc accaatccgg gttagtcccg atgcggcggt gcccagggct
      781 gcgaccgtct cctgaggccg agccgcggtg tcacgcgccg aatcaagtac gcgcgtttgt
      841 tgctccgctg gcggcatgat ctgggttgct tgttcatcgt ctaccgcggc ctccgaagga
      901 taaataatag ttgctgcttc gagtgcggct gcctccgtcg gttgaagttg aacggacggt
      961 gcagtgattg cgggtagggg gttgccactt tcggcgagct tcgcgattcc gaaatcgagc
     1021 acctttactc ggtagccacc cagcccgttc ggctcgagcc agatgttgtc cggcttcaga
     1081 tcgcggtgca ggatgccttg ctgatgcgct tcctgaacgg cgccgcaaac ctgctcgaga
     1141 atgtccacca cccaataaag cggcaggcga ttctcttcag ccagcacatc gctcaacgtg
     1201 cagccatcga gatattccat caccaggtaa gcgactcgat cccgaccgtt gcctgagaaa
     1261 ccaaagtcgg ttacatcgac cacgttcgga tgtctgagac gcccggccgc gcgtgcttcg
     1321 cgtttgaacc gctcgacaaa ctcctggttg cgcatcaatt ggggcgcgat cagtttcagc
     1381 gcgacataac gatcggtgcc caggtgcgtg gccagaaaca ctgcgcccat gccgccctga
     1441 ccgagcagac gctcaagacg atatttgtcg tcgagaactt gtccgacgta acgctggagg
     1501 tcgttcatgc gatggctttt ttctagccca ggcgtttacg cctgggtacc cgcgtgagct
     1561 aaataacaat agcctccttt aggaggcttt caaaacgtcg aaaaaagtaa gcccatgaat
     1621 gggcgtatca aatttgtttc ccgcgttcct caggcgtaaa cgcctgggct acggaaaacg
     1681 cgccgcctgc atactaatgg tcaatcccag tagtgttcct gccactttcg tttcttcagc
     1741 tgcgcgtctg accagaagcc tttgagtagt tgtatacgcg gctcggcgcc gtcaggtttt
     1801 gcgaccaacg tcacgacgtc gtagcgatag ggttcattaa ccaggcccaa catgcgccgg
     1861 tacgccagcg cggcgcgcgc tatctgccgc cgcttgcgca gatcgacgtt tacctcaggc
     1921 gctgcgaaat cgtccgacgc gcgcgtttta acttcaacta aacagagcgt cggcccgtca
     1981 tacgcgacta cgtcgatctc tgcgtttacc acgacatcgc gcaagtttcg gccaatcgga
     2041 agagaaaagt ttgccgcgac aatgcgatag cccgcttgct ccagatgctc aatggcgagc
     2101 gcttcaccgc gccggccgag ttcaaaatga gcgggtgatt gcgcttgaga agggggttcg
     2161 gctttccaga gattgaagcg catagggagt tggaattggt acgcgcgcct ctggcgcgca
     2221 aagcccgaat accggtacgc gcgcctccgg cgcgcttaag cacgccagag gcgtgcgtac
     2281 cttactcttt cggctgtttc ttaacgatct tcggttcttt tgtttttgca gacgacgcag
     2341 cctggccttc cgatgcacca cctgcggcg
//
LOCUS       DATDBY010000557         2007 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_867784, whole genome shotgun sequence.
ACCESSION   DATDBY010000557 DATDBY010000000
VERSION     DATDBY010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_867784"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..761
                     /locus_tag="VIT19_10425"
     CDS             117..761
                     /locus_tag="VIT19_10425"
                     /inference="COORDINATES: protein motif:HMM:NF024747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY5839438.1"
                     /translation="MLRVTEIFHSIQGESTHAGRPCTFVRLTGCPMRCTWCDSEYTFT
                     GGDHFTIEQIMQKVRDFGCSLVEVTGGEPLAQREAFELIRQLCDEEYEVLIETGGYVS
                     TKDVDERAKVILDIKCPASGEADRNDWSNLERLRADQDEVKFVIADASDWEFATKTIA
                     QYELESRTKAILISPAWGLVPLRDLARWITESGLNVRMQLQLHKYIWGPDVRGV"
     gene            899..1621
                     /gene="queC"
                     /locus_tag="VIT19_10430"
     CDS             899..1621
                     /gene="queC"
                     /locus_tag="VIT19_10430"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: protein motif:HMM:NF018242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEY5839439.1"
                     /translation="MGGSTEVIELAIHDEEPSSSSLAICLVSGGMDSCVTAAIANEDN
                     DELAFLHVSYGQLTEVRERRAFEDLADRYHVTKRLAVSIEYLKSIGGSSLTDENIPVS
                     EANLTSSEIPTSYVPFRNSHFLSIATSWAEVIGAQRIYIGAVVEDSSGYPDCRPEFYE
                     AFQRVIGVGTKPETRVTIVTPVIHLRKSEIVRRGGDLNAPLHLTWSCYRAEDRACGRC
                     DSCALRLRAFREAGVTDPIPYA"
     gene            1738..>2007
                     /locus_tag="VIT19_10435"
     CDS             1738..>2007
                     /locus_tag="VIT19_10435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEY5839440.1"
                     /translation="MRRYFYSIIASAVLLLAAVGASAQVGQLRGHVFIQQADGTKVPA
                     AGAQVDVYRTDLPGKFPSKANKNGEFVYAGLPYIGTYVIAVSAPNA"
BASE COUNT          444 a          527 c          559 g          477 t
ORIGIN      
        1 acgatcttta gacgtgtccg gccgattcgt ttgcccgcaa gtttgatgaa gccaggcggc
       61 tgcggttggc cgccacgaaa tcgacaatca caaatctagt atctagaatc tggaaaatgc
      121 tcagagttac cgagattttc cactcaatcc agggcgagtc cacgcacgcc ggccgcccct
      181 gtactttcgt gcgcctgacc ggctgcccga tgcgttgcac gtggtgtgac agcgagtaca
      241 cattcaccgg cggcgaccat ttcacgattg aacagatcat gcaaaaggtg cgcgacttcg
      301 gctgcagcct ggtggaagtc accggcggtg agccgcttgc gcagcgcgag gcgttcgagc
      361 ttattcggca gctttgcgat gaagaatacg aggttttgat tgaaaccggt ggctatgttt
      421 cgactaagga tgttgatgaa cgcgcgaagg tcatcctcga tataaagtgc ccagcttccg
      481 gtgaagctga ccggaacgac tggtcaaatc ttgagcgctt gcgggcggat caagacgaag
      541 tcaaattcgt catcgccgac gcgtcggatt gggagttcgc aacgaagacc atcgcgcagt
      601 acgagcttga gagtcgaacg aaagcaattc tgatttcccc ggcctggggt ttagtccctt
      661 tacgggactt ggccaggtgg attacggaga gcggtttgaa cgtgcgcatg caattgcaac
      721 ttcacaagta tatttggggc ccggatgttc ggggcgtatg aaagcatcat ctgacatctg
      781 atatttggca tttggcattt ggcatttggc atttttcaca ggagctctga agcggcaaca
      841 atgacaagcg cccaatttca aatgtcagat atcaaatgcc aaatcgtaag tgatttttat
      901 gggcggcagc accgaagtaa ttgaacttgc cattcacgat gaagagccgt cttcttcatc
      961 cttagccatc tgcctcgtct caggcggcat ggattcgtgt gtcacggctg cgatcgccaa
     1021 cgaagataac gacgaactgg cattccttca cgtctcgtat ggacagctaa ctgaagtgcg
     1081 tgagcgccgg gctttcgaag acctggccga caggtaccac gtaacgaaac ggctcgctgt
     1141 ctcgatcgaa tatctgaagt ctatcggcgg ctcgtcgctg accgatgaaa acatccccgt
     1201 gagcgaagca aatcttactt cgagcgaaat cccgaccagc tacgtgcctt ttcgcaattc
     1261 acattttctg tcgattgcca caagttgggc tgaggttatc ggcgcgcagc gtatctacat
     1321 cggcgccgtg gttgaagatt cttccggtta tccggactgt cgtcccgagt tttacgaggc
     1381 ttttcagcgc gtcatcggcg ttggaacaaa gcccgaaacg cgtgtcacga ttgtgacccc
     1441 ggtaatacac ctgcgaaaat ccgagatagt aagacgtggc ggagatttga acgcgccgtt
     1501 gcaccttacc tggtcctgct accgcgctga agaccgtgcc tgcggccgtt gtgattcatg
     1561 tgctttgcga ctgcgcgctt ttcgcgaagc aggcgtgacg gatccaattc cgtatgcttg
     1621 acagcacgcg tgcggctaat taacgttagg gcgggtttcc gctacaactt gttgcaaact
     1681 aaaggcatct taacgtcggc tgttcacacc agcagcagat ttttcggagg aacttacatg
     1741 cgtcgttatt tttattcgat tatcgcttca gcggttttgc ttctggcagc cgtcggcgcg
     1801 tcagctcagg ttggccaact tcggggccat gtgtttatcc aacaggccga cggcacgaag
     1861 gtccccgccg ccggcgcgca agtcgatgtt taccgcaccg acctgcccgg caaattcccg
     1921 agcaaggcta acaagaacgg agagtttgtt tacgcgggct tgccgtacat cggcacgtac
     1981 gtcatcgcgg tgagtgcgcc gaatgcg
//
LOCUS       DATDBY010000558         6831 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_255620, whole genome shotgun sequence.
ACCESSION   DATDBY010000558 DATDBY010000000
VERSION     DATDBY010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6831
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255620"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            92..502
                     /locus_tag="VIT19_10440"
     CDS             92..502
                     /locus_tag="VIT19_10440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839441.1"
                     /translation="MAGYSGTPLARKLGIKEGFNLRFVNAPAELDKELDLPAHVTINS
                     RARKPIDLILLFVISKRGLERTFSSYAAKLRPTGMLWICWPKKTSGVASDLSDNVVRE
                     LGLAKGMVDVKVCAINEVWSGLKFVIRLKDRPKN"
     gene            1534..2190
                     /locus_tag="VIT19_10445"
     CDS             1534..2190
                     /locus_tag="VIT19_10445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839442.1"
                     /translation="MLFEIVSERMMTNAAEVIALELKRCPRCEESLPVSEFGVCRARK
                     DGLNLYCKRCIRQKIALSRQALREYKSARTKAGTPSTKTKVTLDPKAGFSSRRIARML
                     RKLSPADRVREAIRCGAKTQKEIALVTKLPKDEVCDALANLLLWTREIRTQIVNHQRL
                     YFVNEALEELQKTAANKVKRGLSPSFSSVGVLMPGRKPSARGKKRSTKAVAAKKAVSS
                     "
     gene            complement(2204..2671)
                     /gene="bcp"
                     /locus_tag="VIT19_10450"
     CDS             complement(2204..2671)
                     /gene="bcp"
                     /locus_tag="VIT19_10450"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF006960.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HEY5839443.1"
                     /translation="MTTKLKEGDKAPDFAVPDGEGNTVRLKDLRGKKVVLFFYPKDDT
                     PGCTKEACAFRDSFSKFKKQGIEVLGVSLDSEKSHQKFAQKYDLPFRLLADTERKISD
                     AYGTYGEKKFMGRKYMGNHRMTFLIDEKGKIKKVYEKVKPDEHAEEVLAAFAD"
     gene            2751..3179
                     /locus_tag="VIT19_10455"
     CDS             2751..3179
                     /locus_tag="VIT19_10455"
                     /inference="COORDINATES: protein motif:HMM:NF013995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HEY5839444.1"
                     /translation="MKSTRKESQGHWLVKQEPEDYSWDDLLRDGSTQWSGVRNFQARN
                     NLRQMKLGDAVFFYHSGKEKCVVGIASVSKAAYPDPTAQEEGWIAVDIKPVKRLPNPV
                     SLADIKANAKLSDLLLVRQSRLSVMPIGKSEFDEIVRMGQ"
     gene            complement(3209..4075)
                     /locus_tag="VIT19_10460"
     CDS             complement(3209..4075)
                     /locus_tag="VIT19_10460"
                     /inference="COORDINATES: protein motif:HMM:NF017945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HEY5839445.1"
                     /translation="MQIDPTISEWLNFIARWIHVFAGIMWVGTTYYFTWLDARLTEEE
                     KAVANTNRGPQPGSPAGVVAGNSAQIWMVHSGGFYAVEKRKVPDELSRKLHWFKWEAG
                     TTWLSGFALLIVVYYLGGGALIDRDVADIGLGTAVGIGTGALIVGWLIYDLLMISPLG
                     RNEKLFAVIAYALIVAAAYGLTRVFSGRGAYIHLGAIFGTIMAANVWMRILPAQRKMI
                     DAIKAGQKPDERLAAQAKLRSKQNTFMAVPVVILMLSSHFGGTTTGGYDWIHLVLLVP
                     VGWLAAKFIRRA"
     gene            complement(4172..4516)
                     /gene="uraH"
                     /locus_tag="VIT19_10465"
     CDS             complement(4172..4516)
                     /gene="uraH"
                     /locus_tag="VIT19_10465"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR02962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HEY5839446.1"
                     /translation="MSTISTHILDTSRGRPAGGITISLERLNAGEGWTPLSEAATDDD
                     GRVKQFVLAEPNLGPGTYRLVFSVEKYFKELNQQTFYPEVSVAFLIEPGAEHYHVPLL
                     ISPFGYSTYRGS"
     gene            complement(4534..5772)
                     /locus_tag="VIT19_10470"
     CDS             complement(4534..5772)
                     /locus_tag="VIT19_10470"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY5839447.1"
                     /translation="MEAKATAVKMKGLAVLMLFLLLPVTCFASSQPRRETFVSRNKKR
                     SYYLFVPDSLKNSEPAPLIILFHGSGRDGLSVVDKWEEIANKETIILAGLNSSDSSVW
                     STTKDGPEVVRDLVEHIKSSYPVDQRRMYLFGHSGGAVYAILLSLMQSEYFAAAAVHA
                     GSLREREEFKMLERLRRNIPLAIWVGTQDPFFSVASVRETRDALVKRGSTVEVTVMPG
                     HDHWYYDLAPRINAAAWLFLKKHALTAEPRYEEVVETARSAEAPKVVDDANRTIAEIN
                     ALKTKVNALVAEVNAREVAAGSKDLLKDRAEINAIAQEEANLLKEAASISRTIADQAA
                     QVKTGKLEKKHRQYFELVAQHSRKYAEMLDVMREQAEALLGNESGEAINAKRAETRKR
                     IEALRQEADELHRQAEKLIH"
     gene            complement(5778..6314)
                     /gene="uraD"
                     /locus_tag="VIT19_10475"
     CDS             complement(5778..6314)
                     /gene="uraD"
                     /locus_tag="VIT19_10475"
                     /EC_number="4.1.1.97"
                     /inference="COORDINATES: protein motif:HMM:NF010372.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline
                     decarboxylase"
                     /protein_id="HEY5839448.1"
                     /translation="MSDEPLDQSISRINELSEAQATGEFLKCCGSTAWANHMTGMRPF
                     SNSDELSSRADEIWWSLDEEDWLEAFRAHPKIGEKKAAAAQSAEAQAWSAVEQSESER
                     AAAETKAALAEGNREYEQRFGFIFIICATGKSAEEILAALNGRLHNDPETELRTAAEE
                     QRKITRLRIEKLLQASAG"
     gene            complement(6307..>6831)
                     /locus_tag="VIT19_10480"
     CDS             complement(6307..>6831)
                     /locus_tag="VIT19_10480"
                     /inference="COORDINATES: protein motif:HMM:NF015522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839449.1"
                     /translation="VARLRVYGEVAPQWNRLRQIGGDVDLAAVEHGGMVLTCSDMFFG
                     HRHNLIMPGRAVNMSDGWETKRRRGPGHDWTIIKLGTAGHIRRLEVDTSWFKGNFPES
                     CSLESCNVADVPLETLQDPAFTWKPVLARTKLQAHTQHFFDEVMETGTASHIRFNIFP
                     DGGVSRLRVYGTIE"
BASE COUNT         1573 a         1872 c         1773 g         1613 t
ORIGIN      
        1 gagctttcaa agtttagtat cgccccgttt ttttgtcggt caaagtttgc cggcaactgg
       61 cgtatgaacg cagagtgaaa gtaaaacttt aatggctgga tattcaggga caccactcgc
      121 ccggaaactt ggtatcaaag aaggtttcaa ccttcggttc gtaaacgcac cggccgaact
      181 cgacaaagag ttggatctgc cggcgcatgt caccattaac tcacgcgcgc gcaaaccgat
      241 tgatctcata ttgctgttcg ttatcagcaa acgcggatta gagcgaacgt tttcaagtta
      301 cgcagcgaag ttacgtccga ccggcatgct ttggatctgc tggcctaaga aaacgtccgg
      361 agtcgcatct gatcttagtg acaatgttgt tagagaactc ggtttggcaa aggggatggt
      421 cgacgtgaaa gtctgcgcga tcaatgaagt atggtcgggc ttgaaatttg tcattcggtt
      481 gaaagaccgg ccaaaaaact aagcctcgcg agctattcac aagcttccac aggcactgtg
      541 taaaacctgt ggacgcagtc acacgcagca acagaacctt ccaaggcgca acaacttagg
      601 gcattttgca caacgcggca gcattcacag tcttcctaag acatgcgttc agcgcaaggt
      661 gaagctaaga aacatgtact gccgggcggc agtgtcgtgt cttccatttt tctcagtgtc
      721 ttcgtaggtt ctctgtgcct ctgtggggaa aatatcccga caagaactca ccaccgagac
      781 acggaataca cacaaagaca cagagcaaac gaatcggccg ggcggctttc tgtccaattc
      841 aggacgctcg actcaagtac ctcatcaaaa tttcatctca tatctacacc ggtacatgac
      901 gaacgaaaga tcaccgccaa ctaatagtag gcccaagccg ctttaggtcg catgggttgc
      961 gcgaaacata cggcgaacga tttatgtgaa gcagtgaatg cgatgaattc attagcaatc
     1021 ttcttgttgt cgttcgcgga gaatcatcac agatcgaaga ttcattagtt gttccgttga
     1081 ttcaagcgtt cttctaactg tcaccactgc acatgttgcg aaggtaagaa gaaattctta
     1141 agtgttcgca acactgaatt gatcgtcttt gacgatttga tcgcactcaa tcaatttgga
     1201 agttgcaaat tttttttggc tacatataat ctcagtccct tgctggataa cgatgaacat
     1261 cggcgatcga gttgacgaaa cgattagcag ttttaacgca cttatttttt tacctcgcaa
     1321 agtaaccgtc agccatttcg cgattaactc gaagcgcttt gcgtttgtga cttgcgattc
     1381 cgatttagca gtacctttcg gatcgcaatc agagttgcga aaaattcaac tcctccgata
     1441 gctcatcgcc aagtttcaca ccgacggggt tcgatcgaac caagggcgca agcagcctcg
     1501 atgctatcgg ggctggagtg gtcagttgga atcgtgttgt tcgaaatagt gtcggagcgg
     1561 atgatgacga atgcagcaga agtaatcgcc ctggaattga agcggtgccc gcgttgtgaa
     1621 gaatcgttgc cggtgtcaga gtttggtgtc tgccgggcac gtaaggacgg actgaatctc
     1681 tactgcaagc gatgcatcag acaaaagatc gctttaagtc gtcaggcgtt gcgtgaatac
     1741 aagagcgcgc gtaccaaagc cggcacccct tccaccaaga caaaggtaac gctcgatccg
     1801 aaggcagggt tttcatcgcg tcgcattgcg cgaatgctgc gcaaactttc gcccgccgat
     1861 cgcgtccgcg aagcaatccg ttgtggcgct aagacgcaaa aggaaattgc gcttgtcaca
     1921 aaacttccga aggacgaagt ttgcgatgca ctggcgaatt tgctgctgtg gacgcgcgaa
     1981 atccgcaccc aaatagtgaa tcaccagcgt ctgtattttg tgaatgaggc cctcgaagaa
     2041 ctgcagaaaa ctgccgcaaa taaggtgaaa cgcgggcttt caccgtcatt cagctcggtc
     2101 ggcgtgttga tgccggggcg taaaccatct gcccggggca agaaacgctc aaccaaggcc
     2161 gtcgccgcga agaaagccgt ctcgtcctga gatcgagctg cggctaatcc gcgaacgccg
     2221 ccagaacctc ttccgcgtgt tcgtccggtt tcactttctc gtaaactttc ttaatcttcc
     2281 ctttttcgtc gatcagaaaa gtcatccggt gattgcccat gtacttgcga cccatgaatt
     2341 tcttttcgcc gtaggtgccg tacgcgtctg agatttttct ttcagtgtcg gcgagcagtc
     2401 gaaacggcaa gtcgtatttc tgcgcaaact tctggtgcga cttctcactg tcgagcgaca
     2461 cacccagcac ttcaatgcct tgcttcttga acttcgaaaa tgaatcgcga aacgcgcacg
     2521 cttccttcgt gcatcccggc gtgtcgtcct ttgggtaaaa aaagagcacg actttcttgc
     2581 cgcgtaaatc tttcaaacga acagtgttcc cttcgccgtc cggcacggcg aagtcgggtg
     2641 ccttgtcacc ttctttgagt ttagttgtca cttggttgat cctctgtttg gaatttagga
     2701 ttagaattct agccaacgat ttcaaaaatc aaaactgaga gacgattgcg atgaagtcaa
     2761 ccaggaaaga aagccaggga cactggctgg tgaagcagga gccggaagat tattcgtggg
     2821 acgatttatt acgcgacgga agtacgcagt ggagtggcgt gcgaaatttt caggcgcgga
     2881 acaacttgcg gcaaatgaaa ctcggcgatg cggttttctt ttatcactcg ggaaaagaaa
     2941 agtgtgtcgt cggaatcgca agtgtgtcga aagctgctta tccggatccg accgcgcagg
     3001 aagaaggctg gattgctgtc gatatcaaac cggtgaagcg tctgccgaat ccagtttcac
     3061 ttgcagacat taaagcgaac gcaaagttga gcgacttgtt actcgtgcgc caatcgcgtt
     3121 tatcagtgat gccgattggg aagagtgaat ttgatgagat cgtgaggatg gggcagtagc
     3181 cccgcgttac acacaccgtg gttaaccgct acgctcgccg aataaatttt gcggccagcc
     3241 agcccaccgg aaccagaagc accaggtgaa tccagtcata accgcccgtt gtcgtgccgc
     3301 cgaaatggct gctcagcatg aggataacca cgggcacggc catgaaagtg ttctgttttg
     3361 acctgagctt agcctgcgcg gccagcctct catccggttt ttgaccggcc ttgatggcgt
     3421 cgatcatttt tcgctgcgct ggcagaatgc gcatccacac gtttgcggcc atgatcgtcc
     3481 caaagatggc cccgagatga atgtaagcgc cgcggccact gaaaacgcgc gtcagaccgt
     3541 atgcggccgc gacaatcagc gcgtaagcaa taaccgcaaa cagcttttcg ttgcggccga
     3601 gcggcgaaat catcagcagg tcgtaaatca gccagccgac aatcagcgcg cctgtaccga
     3661 tgccaaccgc cgttcccaga ccgatatcag caacgtcgcg gtcgattagc gctccgccgc
     3721 cgaggtaata aacgacgatc agcagcgcaa agccgctcag ccaggtagtg cccgcttccc
     3781 atttgaacca gtgaagcttc cgcgacagct cgtccggcac ctttcttttt tcgacggcgt
     3841 agaatccgcc gctgtgcacc atccaaatct gtgcagagtt gcccgcgacc accccagccg
     3901 ggctgcccgg ctggggaccc cggttagtgt tggccacagc tttttcttct tcggtcagac
     3961 gggcgtccag ccaggtgaag tagtacgtcg tcccaaccca catgatgccc gcaaacacgt
     4021 ggatccagcg ggcgatgaag ttgagccact cggaaatggt tggatcgatt tgcatcttgt
     4081 gattagggct ttggttttag gtctttggcc ttttggtctt ggaacgagtc gaattccaaa
     4141 gtccaaagtc caaagtccaa agtccaaaga cctagctccc gcgatatgtc gaatacccaa
     4201 acggactaat taaaagcggc acatgatagt gctcggcgcc gggctcaatc agaaaagcga
     4261 cggaaacctc cgggtaaaag gtctgctgat tcagttcctt gaaatacttt tcaactgaga
     4321 acaccagtcg ataagtgccg ggcccgagat tcggctcagc cagcacgaac tgcttaactc
     4381 gcccatcgtc gtcagtcgcg gcttccgaca gaggagtcca gccttcaccg gcgttcaatc
     4441 tctccaggct aatcgtgatg ccgcccgccg ggcgcccgcg tgaggtgtcc aaaatatgcg
     4501 ttgagattgt gctcacaaca aattcggtcg tgcctagtga atcagctttt ctgcctgccg
     4561 atgcaattcg tccgcttcct ggcgcaacgc ttcgattctt ttccgtgttt cggcgcgctt
     4621 ggcgttaatg gcttcgcccg actcgttccc cagcaaggct tcggcctgtt cgcgcatgac
     4681 atccagcatc tccgcatact tgcggctatg ttgagcgacc agctcaaagt attgccggtg
     4741 cttcttttcc agcttcccag tcttaacttg cgcagcctgg tcggcaatcg tgcgcgagat
     4801 gctggccgct tctttcagca aattcgcttc ttcctgagcg attgcgttta tctcagcacg
     4861 atctttgaga agatccttgc tgccggctgc gacttctcgg gcgttgacct cagccacaag
     4921 cgcattgact ttcgtcttga gcgcattgat ctcggcaatc gtgcggttgg catcgtcgac
     4981 gactttaggc gcctcggcgc tacgggcggt ttccacaacc tcttcgtaac gaggttccgc
     5041 cgtcagcgcg tgtttcttta gaaacagcca tgcagccgcg ttgatgcgag gcgcaaggtc
     5101 atagtaccag tggtcgtggc cgggcattac agttacttca acggtagacc cgcgcttcac
     5161 caacgcatcc cgcgtctccc gcacggatgc aaccgaaaaa aaaggatcct gcgtgcccac
     5221 ccagattgcc agcggaatat tgcgccgcaa gcgctcgagc attttgaatt cttcgcgttc
     5281 acgcagtgac ccggcgtgaa ccgcagcagc agcaaagtat tcggattgca tcagcgaaag
     5341 cagaatcgcg tataccgctc ctcctgaatg tccaaaaaga tacatacgcc gctggtcaac
     5401 ggggtagctg gatttaatgt gctcgacaag atcacgcacc acctccggcc catctttagt
     5461 ggtgctccag acggacgaat ccgacgagtt caaaccggcg aggatgatgg tttccttgtt
     5521 cgcgatctct tcccatttgt cgacaaccga gagcccgtct cgccccgaac catgaaacag
     5581 gattatcaaa ggcgcgggtt ctgaattctt cagactgtct gggacgaaaa gataataaga
     5641 gcgcttcttg ttgcgggaaa caaaggtctc tctccgcggc tgtgacgaag cgaagcaggt
     5701 gacagggagc agaaggaaca gcattagcac tgccaagccc ttcattttga ctgcggtcgc
     5761 cttcgcttcc atgagtatca tccagccgaa gcttgcagaa gcttttctat tctgagccgc
     5821 gtaatctttc gctgttcctc ggctgcggtg cgcaattcgg tttccggatc gttatgcaag
     5881 cggccattca gagccgcaag tatctcttcc gctgactttc cggtggcgca gataatgaag
     5941 atgaagccaa atcgctgttc atattcgcga tttccttccg ccagcgcggc tttcgtttcg
     6001 gctgccgcgc gctcgctttc cgattgttcc actgccgacc acgcttgggc ctcagccgat
     6061 tgcgcggccg cagctttctt ttccccgatt tttgggtggg cgcgaaacgc ttcgagccaa
     6121 tcttcctcgt ctagtgacca ccaaatctca tccgccctgg acgaaagttc gtccgaattc
     6181 gaaaacggac gcatgccggt catgtggttc gcccatgccg ttgagccgca gcatttcagg
     6241 aactcacctg tggcttgagc ctccgatagc tcatttattc ggctaatcga ttgatccaat
     6301 ggttcatcac tcaatcgtcc catatacgcg caaccggctg acgccgccgt ccggaaagat
     6361 gttgaaacga atgtgagacg ccgtgcctgt ctccatcact tcgtcaaaga aatgctgggt
     6421 gtgcgcctgt agctttgtgc gtgccagcac cggcttccag gtaaacgcag gatcctgcaa
     6481 cgtttcgagc ggcacgtccg cgacgttgca gctttcaagc gagcagctct cagggaagtt
     6541 tcctttgaac caggacgtgt ctacttccag acgtcgaatg tggccggctg tgccgagctt
     6601 gatgatcgtc cagtcatgac cggggccgcg ccgccgcttg gtttcccaac cgtcgctcat
     6661 gttcaccgcg cgtcccggca tgatcagatt gtgccggtgg ccgaagaaca tgtcgctgca
     6721 agtgagcacc attccgccat gctcgacggc cgcgagatcg acatcaccac cgatttgccg
     6781 caagcggttc cattgcgggg ccacctcgcc gtacacgcgc agacgcgcca c
//
LOCUS       DATDBY010000559         3128 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1314576, whole genome shotgun sequence.
ACCESSION   DATDBY010000559 DATDBY010000000
VERSION     DATDBY010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1314576"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..601
                     /locus_tag="VIT19_10485"
     CDS             <1..601
                     /locus_tag="VIT19_10485"
                     /inference="COORDINATES: protein motif:HMM:NF017142.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839450.1"
                     /translation="WNGHAIRGVDYATSQWFSEGFTEYFANLALVQERLISKDLFIRK
                     IENHLGLYLYFKEAPAFDGVTLKEAGSRKGRYRLGVYNGGWAVAFCLDVLIRSETNNR
                     KSLVNFMRLMHERFGLTGKPYRYEDLVALASETAGRNLEDFFERYVEGKESLPVQDYL
                     KRIGLNGYTQFYDGEFFIVEAPVTTVAQKSLKQAILTGR"
     gene            complement(643..1467)
                     /gene="mazG"
                     /locus_tag="VIT19_10490"
     CDS             complement(643..1467)
                     /gene="mazG"
                     /locus_tag="VIT19_10490"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF007113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HEY5839451.1"
                     /translation="MPKTFADLVELMDRLRSPGGCPWDREQTYATLAPMLLEEAYEAF
                     DALEEARQGRPDSLREELGDLLFQITFFARVATERNEFTIDDVIEEVHAKMVRRHPHV
                     FGEVEAGDSAEVLRNWEAIKAEEKRAAGKVSGEADGSILDGVSTKAPALMEAHQISTK
                     VARVGFDWTSVDEIFEKLQEEVEELRVAIDAHKQSADEADHVHIREEIGDMLFVVTNI
                     ARRLNVEPEAALKLANRKFRQRFAHIEKRLREQSQKFEDVSIRDLEELWQEAKRAE"
     gene            1706..2263
                     /locus_tag="VIT19_10495"
     CDS             1706..2263
                     /locus_tag="VIT19_10495"
                     /inference="COORDINATES: protein motif:HMM:NF020473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1844 domain-containing protein"
                     /protein_id="HEY5839452.1"
                     /translation="MAEEQPTFKVVDRRPFNPDGTPRELSAEEKESQEAAKAKASVEP
                     PPEALPAPEPETPPRPAAQTARVASEPHAAHEQARPAGRDPLDDPASFISLIMSLASN
                     AAASLGMMPHPVTGETGVDLKTAKHWIDVLGMLEKKTAGNLDPQEDQMLEGLLADLRM
                     QYVSFSGAPTPPPAKFSASDITGGK"
     gene            2436..>3128
                     /locus_tag="VIT19_10500"
     CDS             2436..>3128
                     /locus_tag="VIT19_10500"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY5839453.1"
                     /translation="MKLTFLGTGTSTGVPSIACNCETCTSDDPRDKRLRVSVLIEHAG
                     QTVIIDTSSDFRQQALRSGIKHLDAVLVTHCHADHIFGLDDIRPLNFRHGALGLYANE
                     RAWKDIRRIFQYVFQPSHFGGGLPQIVPHTVVNGAPFCFGADLHITPLEVTHGRLPVI
                     AYRLNDFAYATDLNEIPPATLEGLRDLKVLALDCLRIRPHETHLWLEKALAYVEELKP
                     QRTFFTHISHDIK"
BASE COUNT          684 a          899 c          837 g          708 t
ORIGIN      
        1 gtggaacgga cacgctatcc gcggcgtaga ctacgccacc agccagtggt tttccgaagg
       61 gtttaccgag tactttgcga atctcgcgct cgtgcaggag cggctaatca gcaaagactt
      121 gttcatcagg aaaatcgaaa accacttagg gctctatctc tacttcaaag aggcgccggc
      181 cttcgacggc gtgaccttga aggaagcagg ctcacgcaaa ggtcgttatc gactcggtgt
      241 gtataacggc gggtgggcgg ttgcgttctg cctcgacgtg ctgatccgaa gcgagacaaa
      301 taatcgaaaa agcctggtaa attttatgcg cctgatgcat gagcggtttg gcctgaccgg
      361 aaagccgtat cgctacgagg atctggtggc ccttgccagt gagactgccg gtcgaaacct
      421 ggaagacttt ttcgagaggt acgtggaagg caaagagtcg ctccccgtgc aggattactt
      481 aaagcgaatc ggtttgaacg ggtacacgca attctacgac ggcgagtttt ttatcgttga
      541 agcgccggtg actacggttg cgcaaaagag cttaaagcaa gctattctga ccgggcgttg
      601 ataatgcttc gccgactctc tgacaagccg ccagctaaag agtcactctg ctcgctttgc
      661 ttcctgccag agttcttcca aatcgcggat cgaaacatcc tcaaactttt ggctctgctc
      721 gcgcaaacgt ttctcgatat gcgcgaagcg ctgccggaac tttcgattgg cgagcttcaa
      781 ggccgcttcc ggctcgacgt tcagccgccg ggcgatgttc gtaaccacga acagcatgtc
      841 gccaatttct tcccggatgt gcacgtgatc ggcttcatcg gctgattgtt tgtgcgcatc
      901 aatggcgacg cgaagctctt caacttcttc ctgaagcttc tcgaagattt cgtcaacgct
      961 tgtccagtca aatccgaccc gcgctacctt cgtggagatc tgatgcgctt ccatcagcgc
     1021 cggcgccttc gtggacacgc cgtccagaat cgatccatct gcttcgcccg acactttgcc
     1081 ggcggcacgc ttttcttcgg ctttgatcgc ttcccagttg cgcagcactt ccgctgaatc
     1141 gcccgcttca acttcgccaa acacatgcgg atgccggcgc accatcttcg cgtgcacttc
     1201 ttcgatcacg tcatcgatgg tgaactcatt acgctctgtc gcgacccgcg caaagaaggt
     1261 gatctggaaa agcagatcgc ccagttcttc gcgcagcgaa tcaggccgcc cctgccgcgc
     1321 ttcttccaaa gcatcgaagg cttcgtaagc ttcctcaagc agcatcggcg ccagagtcgc
     1381 gtaagtctgc tcgcgatccc acggacagcc gcccggagag cgaagtcgat ccatcaactc
     1441 gacgagatcg gcgaaagttt tcggcatgcg agctagtttc aggtttcgag tttgaagttt
     1501 caagttgggc taattgactg gagcgcaacc gttccggttg ccggttgttc gctaagagtg
     1561 caagcgagac gcttgcgctc cagtcacgac cacctgacac cgctttgcga tcaatcaaaa
     1621 gcgagtgcta acattcgcgt cacccaatca aattggttcc tgacgatgcg ctttgtggat
     1681 ttccggggcg cttgtccgag gtgtcatggc agaagaacaa cccacattca aagtagttga
     1741 ccgtcgccct tttaatccgg atggaacccc gcgcgagctt tcagcggaag agaaagaatc
     1801 gcaggaagct gccaaagcga aagcctcggt tgaaccgcca ccggaagctt taccggcacc
     1861 tgagccggaa actccgccgc ggccggcggc acagacagcg cgcgtggctt ctgaaccgca
     1921 cgccgcgcat gaacaagcgc gaccggccgg tcgcgatccg ctcgacgatc cggcgagttt
     1981 catcagcttg atcatgtcgc tggcttcgaa cgccgctgct tcactgggaa tgatgccgca
     2041 tccggtaacg ggtgaaacgg gcgttgattt gaaaacggca aagcattgga tcgacgtgct
     2101 cggcatgctc gagaagaaaa ctgccggcaa cctggatcct caggaagacc aaatgctcga
     2161 aggcctgctc gcggacctgc ggatgcaata cgtttcattt tccggggcac caacgccgcc
     2221 gcctgcgaag ttcagcgcca gcgatatcac cggcggaaaa taactgtcag tagtcagtgg
     2281 tccgtcgtca gttcttcctt ttgtgctttg tactttgagc ttagaacttt gacgtccctt
     2341 cctggaggct cggttttaga ttgctgaggt gctccgaaac cacatcaaag cacaaagcac
     2401 caagttcaaa gtacaaatat caacgactgg cgaaaatgaa actaacgttc ttaggcaccg
     2461 gaacatccac cggcgttcct tccattgcct gtaactgcga aacgtgcacg tccgacgatc
     2521 cgcgcgataa gcgtctgcgc gtctcggttc tgatcgagca cgccggacaa actgtcatca
     2581 tcgacacttc ctctgacttt cgtcagcagg cactacgctc cgggatcaag catctcgacg
     2641 cagtgctcgt cacgcattgt catgccgatc acatttttgg gctcgatgat attcggccgc
     2701 tgaactttcg gcatggcgcg ttggggctgt acgcaaacga acgtgcgtgg aaagacattc
     2761 ggcgcatttt tcagtacgtc tttcaaccca gtcatttcgg cggcggcttg ccgcagattg
     2821 ttccgcacac ggtcgtgaat ggcgcgccgt tctgcttcgg agctgattta cacatcaccc
     2881 cgctcgaagt gacccacggc agactgccgg tgattgccta tcgtctaaat gactttgctt
     2941 atgcgactga tttgaatgag attccgccgg cgacacttga aggtctccgc gatctgaaag
     3001 tgctcgcgct tgactgtctg cgcatccgtc cgcacgaaac gcacctgtgg ctcgagaagg
     3061 cgcttgcgta cgtcgaggaa ttgaagccgc aaaggacttt cttcacgcac atttcgcacg
     3121 acatcaag
//
LOCUS       DATDBY010000560         4411 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_27292, whole genome shotgun sequence.
ACCESSION   DATDBY010000560 DATDBY010000000
VERSION     DATDBY010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4411
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27292"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..593)
                     /locus_tag="VIT19_10505"
     CDS             complement(<1..593)
                     /locus_tag="VIT19_10505"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HEY5839454.1"
                     /translation="MQNSSNPNPIAEQSIDVLIMAAGLGTRMKSNVAKVLHKLDGRPL
                     ISHVCRSALALNPGKVVVIVGHQAEEVRAIVEEEFASDRERIAFVHQLKQRGTGDAVI
                     AAEGELRGDNRTVLVLSGDVPLIRPGTLTKLIDAHHAAKAACVLLSVRLENPTGYGRV
                     MRDDAGDFVKIVEQKDATDEERQIREINAGIYCFESA"
     gene            complement(611..1639)
                     /locus_tag="VIT19_10510"
     CDS             complement(611..1639)
                     /locus_tag="VIT19_10510"
                     /inference="COORDINATES: protein motif:HMM:TIGR01826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconeogenesis factor YvcK family protein"
                     /protein_id="HEY5839455.1"
                     /translation="MNEIISNRGLRLVAIGGGTGLSTLLSGLKKFVGRQNEEVWLESL
                     SAIVTVSDDGGSSGRLRDELQMLPPGDIRNCMIALSEDSNLLSRLFRHRFGGSGDLAG
                     HSFGNLFLAALADVTGDFVEAVRLSSEVLASKGHIFPATTTDVRLVAELEDGRTVHGE
                     TQITAAKSEIRSLRLEPDHCEPLPGALAAIRAADVITLGPGSLYTSILPNLLVSEVPD
                     AIAESPGTKIFVTNLMTQPGETDGFDAQKHLATVKKYAPQIQFDYVLLNDRNITGHQA
                     SLYAADGAFQVTWAESTPSINGTGYGEIVRTNLLEEGEMVRHDPDQLARVVLACGVQS
                     QVPLHLTA"
     gene            complement(1733..2560)
                     /locus_tag="VIT19_10515"
     CDS             complement(1733..2560)
                     /locus_tag="VIT19_10515"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839456.1"
                     /translation="MSSPEKRLSSRSTARSAAKGAGGRKRVAKSTRLKPATKRSPAGK
                     ARANKATKVTSSKKATTKRASAKPAAKSRAKAAPKRPAKVTKAPTRRVTAKPILHPVR
                     KQPLPPPPQPTFEEAAALTAFESAHKEFTRGRFAEARSQFRSLIEKYPSVSEVAARAR
                     TYLAVSEARLRTDLTPPRDADSLYDRGVIELNRGDYVAAQELFERALKREPEAAHIHY
                     GLAATRARLGAIDAALRSLRSALDLQPKLRIRAQRDLDLNSLRTDPEFDQIVFPPAE"
     gene            2892..3371
                     /locus_tag="VIT19_10520"
     CDS             2892..3371
                     /locus_tag="VIT19_10520"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEY5839457.1"
                     /translation="MPILIREQRYHHIKALLARLRLDAAARVVVLVEKDGQQIAAHGE
                     VGDLDTTSLASLVAGNVAATGGMAKLIGEKEFPTLSHEGDKESIHISVIGRVLLVVVF
                     DQRSSLGLVKLRSKQVSQELAAAFAEIERESQAPGATSGLPFSEITDEEIDSLFVQN"
     gene            3384..3968
                     /locus_tag="VIT19_10525"
     CDS             3384..3968
                     /locus_tag="VIT19_10525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015347803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase domain-containing protein"
                     /protein_id="HEY5839458.1"
                     /translation="MTFINYASREINCKIVYYGPGLCGKTTNLQHIYDATAPQARGKL
                     ISLATETDRTLFFDFMPLELGTVRGFKTRFHLYTVPGQVFYEASRKLILKGVDGVVFV
                     ADSQEERMDANIESLYNLEENLRVHGFDLMKVPYVLQLNKRDLPHIIPAEDLTAELQK
                     KGEPVVEAVASTGVGVFDTLKAVAKQVLTELRKS"
     gene            complement(3971..>4411)
                     /locus_tag="VIT19_10530"
     CDS             complement(3971..>4411)
                     /locus_tag="VIT19_10530"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEY5839459.1"
                     /translation="LRPLTMGQIDECWQLDQRCFLDGEAYSRDTFEYLLGSPESVSYR
                     VVTQASSMAGFVIGLLEPDHTGHITTIGIAPEHRRRRLASCLMDRVEDGFRRRNARIA
                     RLEVRATNVPAQKLYLSLGYSVTQRLPKYYSNGGDGLLMVKPLG"
BASE COUNT          969 a         1253 c         1237 g          952 t
ORIGIN      
        1 ttagcgcttt caaagcaata gatgccggcg ttaatttcac gaatctgtcg ctcttcatcc
       61 gtcgcgtctt tttgttcgac gatcttcacg aagtcgcccg cgtcgtctcg catgacgcga
      121 ccgtaaccgg tcgggttttc aagcctcacg ctgagcagca cgcaagcggc ttttgccgca
      181 tggtgagcgt cgatcaattt agtcaacgtg cccggtcgaa tgagcggcac gtcacctgag
      241 agcaccagca cagttcgatt atcgccgcgc agttcaccct cagcagcgat caccgcatcg
      301 ccggttccac gctgtttcag ttgatgaaca aacgcaatcc tttcgcggtc tgaggcgaat
      361 tcctcttcga cgatcgcgcg gacttcttcc gcctggtgac caacaattac gacgacctta
      421 cccggattga gcgctaacgc gcttcggcaa acgtgcgaga tcaacggacg gccatccagc
      481 ttgtgcagca ctttcgcgac attcgatttc atacgcgtgc ccaagccggc agccatgatc
      541 agaacgtcaa tactctgttc agcgatcgga ttcggatttg aagaattctg caagatcgtt
      601 atttgggtga ttaggctgtc aaatgcagag gcacctgcga ttgtacgccg catgccagca
      661 caacgcgcgc cagttgatca ggatcgtgac gcaccatttc gccttcctca agcaagttcg
      721 tgcggacgat ttcaccgtag cccgttccgt taatgctggg cgtcgactca gcccaggtta
      781 cctggaacgc gccgtcagcc gcgtacagcg aggcctggtg cccggtgata ttacggtcat
      841 tcaacagcac gtaatcaaac tgaatctgcg gagcgtactt cttgacggtc gcaagatgtt
      901 tctgcgcgtc gaagccgtct gtctctccgg gctgcgtcat caggttagta acgaagatct
      961 tggttccagg tgattcagca attgcgtcag gaacttccga aaccagcagg tttggcaaga
     1021 tgcttgtgta aagcgatcca gggcccaggg ttattacatc ggcagcgcga atcgcggcga
     1081 gcgcacccgg cagaggttcg cagtgatccg gctcgagccg caggctccga atttcggatt
     1141 tcgcagcagt gatttgcgtt tctccgtgga ccgttcgtcc gtcttccagt tccgccacga
     1201 gtcgcacatc cgtggtcgtc gccgggaaaa tgtggccttt gctcgccagg acctctgacg
     1261 agagacgtac ggcttccacg aagtcgccag taacgtccgc cagcgcggcg aggaagagat
     1321 taccgaagct gtgcccggcc aaatcgcctg agccaccgaa acgatggcga aaaaggcgcg
     1381 acagaaggtt tgagtcctct gacagcgcta tcatgcagtt gcgtatgtcg cccggcggaa
     1441 gcatctgaag ttcgtcccgc aggcggcccg aactcccacc gtcgtcagaa acggtgacaa
     1501 tagccgaaag cgactcgagc cagacctcct cgttttgccg gcccacaaac tttttcaatc
     1561 cggacagaag ggtcgagaga ccggtaccgc caccgatcgc cacgagtcta aggccacgat
     1621 ttgagattat ctcgttcatt cttgcgcgag cttaacactc ccacaggcaa aatatacctg
     1681 aaagcaaacg gcactggtag agatctggat tgaaccgcga aagtgggaga tgtcactcag
     1741 ccggagggaa aacaatttga tcgaactcag ggtcggtacg aagggaattc aaatccaaat
     1801 cgcgttgggc gcggattcgc agttttggtt gcaaatccaa ggcgctacgc agtgacctca
     1861 acgcagcatc gatggcgccg agtcgcgcgc gggtggcggc cagcccgtaa tgaatatgtg
     1921 cagcctcagg ctcgcgtttc aaggcgcgct cgaacagttc ctgcgccgct acataatcac
     1981 ctcggttcaa ttcaatcaca ccacgatcgt aaagcgagtc agcatcgcgc ggcggcgtga
     2041 ggtccgtgcg caaccgagct tcggaaaccg cgagataagt tcttgcgcgg gcagcgactt
     2101 cggataccga ggggtacttt tcgatcaagc tgcgaaactg actccgggct tccgcgaaac
     2161 ggccgcgcgt gaattccttg tgcgcggatt caaaagcagt gagtgccgca gcctcttcaa
     2221 acgttggctg aggtggtggc ggcaacggtt gctttctaac cgggtgcaga atcggttttg
     2281 cggttacgcg gcgagtcggt gctttcgtga ctttggccgg ccgcttgggc gcagcctttg
     2341 cgcgagactt ggcggcgggc ttcgctgaag cacgctttgt cgtcgccttc ttgctcgatg
     2401 taacttttgt tgctttgttc gcgcgagcct tgccggcagg cgaacgtttg gtagccggct
     2461 tcaaccgcgt tgatttagcg acacgcttcc gcccgcccgc gcctttggcc gccgagcgcg
     2521 ctgttgaacg tgacgagagt cttttttccg gactactcat tgtgacctat gctgaaaccc
     2581 ctaaaggtac ccaaacgccg cctgttaagg ggcggagctt agcacaggtc tggccctaat
     2641 tcaatgaaag aatagggttt gtgggcagtc ttagatggcc gcgttcaaca atgatggccg
     2701 ctaacctgcg gccgaaaaac agttgatgcg gcaatcttcg ccgtgttaag gtgactcgtg
     2761 gcccccggtg tccggttttg acccgctggg agaccaagaa atcaaggcgg aatttagcca
     2821 gaacctgccc ctcactccgt tgcaacaatg ttgaccactc gactgagctt cgctcgaagt
     2881 cacctgactg tatgcccatt ctgatccgag agcagcgtta ccaccacatc aaggcgctgt
     2941 tggccagact gcgtttggac gcggcggcca gggtggtcgt gctcgtggag aaggacggtc
     3001 aacagatcgc cgcccacggt gaggtcggag acctcgatac caccagtctc gcatcgctgg
     3061 ttgccggcaa tgtggcggcg accggaggca tggcgaagtt gatcggcgaa aaggaatttc
     3121 cgacgctctc gcatgaaggc gacaaagaga gcattcacat cagcgtcatc ggtcgcgtgc
     3181 tacttgttgt cgtgttcgac cagcgctcca gcctcggcct ggtaaagctt cgttccaagc
     3241 aagtgtccca ggaactggcg gctgctttcg cggaaattga acgcgaatca caagcccccg
     3301 gagctacatc cggcttgccc ttcagtgaaa tcactgacga agagatcgac agcctcttcg
     3361 ttcaaaacta aatccatcaa gctatgactt tcattaacta cgcatcgcgc gagataaact
     3421 gcaaaatcgt ttactacggc cccggcttgt gcggcaagac tacaaacctt caacacatct
     3481 acgacgcgac ggcgccgcag gcgagaggca agctaatcag cctcgcgacg gaaactgacc
     3541 gcacgctgtt ctttgacttt atgccgctcg agctcggcac cgtgcgcgga ttcaagacgc
     3601 gctttcacct ctacacagtt cccggccagg ttttctacga agcctctcgc aaactgattt
     3661 tgaaaggtgt cgatggcgtg gtgttcgtcg ctgattcgca ggaagagcgg atggacgcga
     3721 acatagagtc gctctacaac ctcgaagaga atctcagagt gcacggtttc gatctgatga
     3781 aggttccgta cgtgctgcag ctgaacaaac gcgacctgcc gcacattatt cccgcggaag
     3841 atctcacggc ggaactgcaa aagaagggcg agccggttgt cgaagcagtc gcttcaacgg
     3901 gcgtcggtgt attcgatact ctgaaggctg tagcgaaaca ggttctaacg gaattgcgga
     3961 agagctaggt tcaaccgagc ggcttcacca tcaacaagcc atccccgcca tttgaatagt
     4021 atttcggcag tcgctgcgtg acgctgtaac cgaggctgag ataaagcttc tgtgcgggca
     4081 cgtttgtcgc cctgacttcc agacgcgcga ttcttgcatt acggcgccga aatccatctt
     4141 cgacacgatc cattaagcag cttgccaacc gccggcggcg atgctcgggt gcgattccga
     4201 tcgtcgtgat atgacctgtg tggtcaggct caagcaggcc gatgacgaaa cccgccatgg
     4261 aactggcttg cgttacgacg cgataagaaa cggattcggg tgaaccgagc aggtattcaa
     4321 aagtgtcacg gctgtaggct tcgccatcaa gaaaacagcg ctgatccagc tgccaacatt
     4381 cgtcgatttg gcccatcgtc agcggacgca a
//
LOCUS       DATDBY010000561         4549 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2096563, whole genome shotgun sequence.
ACCESSION   DATDBY010000561 DATDBY010000000
VERSION     DATDBY010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4549
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2096563"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1552
                     /gene="groL"
                     /locus_tag="VIT19_10535"
     CDS             <1..1552
                     /gene="groL"
                     /locus_tag="VIT19_10535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004211302.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEY5839460.1"
                     /translation="KGRNVVLDKKYGSPTITKDGVTVAKEIELKDPMENMGAQMVREV
                     ASKTSDVAGDRTTTATVLAQAIFREGVKTVAAGANPMALKRGIDKAVERATKEIQKMS
                     KPVTGEMIAQVGTISANGDHAIGELIAEAMEKVGKDGVITVEDSKTMETALEVVEGMQ
                     FDRGYLSPYFVTDPESMEVELENPVILLSEKKISSLRDMLPILEQAARLSKPLLIIAE
                     DVEGEALATLVVNKLRGTIAVAAVKAPGFGDRRKAMLEDIAVLTGGKVISDDLGIKLE
                     NVKLEDLGSARRVTLDKDTTTIIDGAGSTKDVQARVKTLKAQIEEATSDYDREKLQER
                     LAKLVGGVAVIRVGAATETELKEKKARVEDAMNATRAAVEEGIVPGGGVVLIRAAKAL
                     DKFKLFETDKDGEVIGDVDEQIGVNIVRRALEEPLRQIVANAGKEGAVIVEKVRAEKN
                     PNVGYNAATETFEDLVAAGVIDPAKVTRCALQNAASIAGLMLTTEALISELQDDDKPR
                     AMPGGMDM"
     gene            complement(2018..2929)
                     /locus_tag="VIT19_10540"
     CDS             complement(2018..2929)
                     /locus_tag="VIT19_10540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839461.1"
                     /translation="MAKREDPIDALFKLPLTEFIGARKKLAAQFKKDGNADEAERVKA
                     LAKPPVSAWTVNQLYWTHREAFDELLATGQRFRKAQTSGKMANMREALDGRREALSQL
                     SDLATEILRDAGHNPSLDTLRRIATTLEALSSFESVSDSPTPGRLTRDVDPPGFDSFG
                     SFVPSAAKAKRAPDPPKKSVTASSKQQSITASAEVTRRGERQAQINAAKVSLQGAKKS
                     LAAARAMTKSLEAAQKRAEAVAKEAEKQRRQAEERFKKASAASEDAIERAQSIVAELT
                     EATQALREAERTVEKATRELEASFQGA"
     gene            complement(2996..4471)
                     /locus_tag="VIT19_10545"
     CDS             complement(2996..4471)
                     /locus_tag="VIT19_10545"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HEY5839462.1"
                     /translation="MKRQGWQRLMRKDITRLVVGVLLVCHLLIFPGSRFANQSRSVNS
                     RPNIVFILVDDLRWDELGIAGHPYLKTPNIDRLGREGAFFPNAFMTTPLCSPSRAGFL
                     TGQYPHTHGIIDNVDRSAASHRLVTFPLLLKQAGYETAFIGKWHMGNDDTPRPGFDRW
                     VSFKGQGSYLDPDFNIDGVSIKGSGYITDLLTGHAVDFIKRRHDKPFLIYLAHKAIHP
                     EVMQHDDGSVNLAHAEVFIPADRHRRLYAGARIPRRPSYGRVPEDKPVLQRRIGNLTP
                     LGARTVTSDEAILARQRSLMAVEEGVGEILTALKQTGQLDNTVIVFASDNGYFYGEHG
                     LSVERRLAYEESIRMPLLVRYPKRIRPGTVRNEPALNIDLAPTILELARVPVPKTIEG
                     HSLVPLLSGSRRAWRNSFLIEYYSDKVFPRILQMGYQAVRADNWKYIHYLELDGMDEL
                     YDLKADPFEMKNLASDPRAATALAKMKLELKRLVKTSAVKR"
BASE COUNT         1014 a         1202 c         1321 g         1012 t
ORIGIN      
        1 aaaggggcgg aacgttgttc ttgataagaa atacggcagc ccgaccatca ccaaagacgg
       61 tgtaacggtg gctaaagaga tcgagctcaa agatccaatg gagaacatgg gcgcgcaaat
      121 ggtgcgcgaa gtggcttcga agaccagcga cgttgccggc gacagaacta ccacagcgac
      181 tgtgctggcg caggctatct tccgcgaagg cgtgaaaact gtcgcggcgg gtgcgaaccc
      241 gatggccttg aaacgcggca tcgacaaggc cgttgagcgt gcgaccaaag agattcagaa
      301 aatgtcgaag ccggtcacgg gagaaatgat cgcccaggtc ggaaccatct cggcgaacgg
      361 tgaccatgcc attggcgagt tgattgccga ggctatggag aaggtgggca aggatggcgt
      421 catcaccgta gaagactcga agacgatgga gacggccctg gaagtggtcg aaggaatgca
      481 attcgatcgt gggtaccttt cgccctactt cgtcaccgat ccggaaagca tggaagttga
      541 gctggagaac ccggtcattc ttcttagcga gaaaaagatt tcctcgctgc gggacatgct
      601 gcccattctt gagcaggcag ccaggctgag caagccgctc ctgatcattg cagaggatgt
      661 cgaaggcgaa gcgttggcga cgctcgtggt gaataaattg cgcggcacga tcgcggtggc
      721 tgcggtgaaa gcaccaggct ttggtgatcg ccgtaaagcg atgcttgaag acattgccgt
      781 cctgacaggc ggcaaggtca ttagcgacga cctcggaatc aaacttgaga acgtcaagct
      841 tgaggacctt ggtagcgccc ggcgggtgac gctcgataaa gatacgacca ccatcatcga
      901 tggcgccggc agcaccaaag acgtgcaagc ccgggtgaag actctgaaag cccagatcga
      961 agaagcgacg tcggattatg atcgcgaaaa gttgcaggag cggctggcga aactggtcgg
     1021 cggcgtcgca gttattcgcg tcggcgcggc gacggaaacg gaacttaaag agaagaaggc
     1081 tcgcgtcgaa gatgcgatga acgccacccg cgcagcagtt gaagaaggca tcgtgcccgg
     1141 cggcggtgtg gttctgattc gcgcggcgaa ggcgcttgat aagttcaaac tattcgaaac
     1201 ggataaagac ggcgaagtga ttggcgatgt agacgagcag attggcgtca acatcgttcg
     1261 gcgcgcgttg gaagagccgc tgcgtcaaat cgttgctaac gcgggcaaag aaggcgcagt
     1321 gatagttgag aaggttcgcg ctgaaaagaa cccgaacgtt ggctacaacg cggcgacgga
     1381 gacttttgag gacctcgtgg ccgccggcgt tatcgatcct gcgaaggtta cgcgttgcgc
     1441 attacaaaac gccgcgtcaa ttgcaggcct gatgctcacc actgaagctc tgatttctga
     1501 gctccaggac gatgacaagc cacgggcaat gcccggcggc atggatatgt aattccccct
     1561 gacaagatgg gaagcctcat tttcaccatg gggcttctta tccatttcac agactatcgc
     1621 cgtcctggca gttcagttga ccaacaatct ctaaaaaccg ggaatgaagg tggcacagac
     1681 ttcagtctgt gttgcggtta gagtgcagaa aattacagac tgaagtccat gccactacga
     1741 tttgcctcaa aagtctgcaa gttcatggtc tcaaggtttc agctctcatt cacaccgggc
     1801 ttcagcccgg tgttcccgag ccgctaaggt aaagaaaccg tttcaacggt ttctctctcg
     1861 ggcagatgta agtggatcct gatcaaacgc tcggtttgtg aagaagtgga aaccgttaaa
     1921 acggtcccac tagtcttttc cttgctaaag gtcaccgggc tgaagcccgg tgtgaatgag
     1981 agacatgggg ctcgactttt tgcgcaagtc tgtgccacta ggctccttga aacgatgcct
     2041 cgagttcgcg ggttgctttc tcgacagttc gctccgcctc gcgcaaagcc tgagtggctt
     2101 ctgttaactc cgcgacgata ctctgcgcgc gttcgattgc gtcttcggat gcggcgcttg
     2161 ctttcttgaa gcgctcctcg gcctgacgcc tctgcttctc ggcttctttt gcgactgcct
     2221 cggctcgttt ctgcgctgct tccagactct ttgtcatcgc acgcgccgca gccagtgact
     2281 tcttcgcacc ttgtagtgaa acctttgcag catttatctg tgcctgccgc tcgccacgcc
     2341 gcgtaacttc ggcagacgct gttatgcttt gctgtttgct tgaagcagtg actgatttct
     2401 ttggcgggtc cggcgcgcgc ttcgctttgg cggcgctggg aacgaatgaa ccgaatgaat
     2461 caaagccggg tggatcgacg tcacgggtca atcgccccgg agtggggcta tccgaaactg
     2521 actcgaacga cgacaaggcc tcgagtgttg tggcaatgcg tcgcagtgta tcgagcgacg
     2581 ggttatgacc ggcatcgcgg aggatttcag tcgccagatc tgaaagctgc gagagggcct
     2641 cgcgtcgtcc gtccaaagct tcgcgcatgt tggccatctt cccggatgtc tgtgccttgc
     2701 ggaatctttg tccggtcgcc aacagctcgt cgaacgcctc gcgatgcgtc caatagagct
     2761 ggttcacagt ccaggctgag acgggcggct ttgccagcgc cttgacgcgt tccgcctcat
     2821 ccgcattccc atccttctta aattgagccg ccagtttctt gcgcgcgccg atgaattcgg
     2881 tcaagggaag cttgaacaac gcatcaattg gatcttcgcg tttggccatt taactagtcg
     2941 agtctcttgc gttttcgtaa ccgccgagtg ggggccggct cagacgacag atactttatc
     3001 gcttcaccgc tgatgtctta accaatcgtt tcaactcaag cttcattttt gccagagctg
     3061 tcgccgcacg aggatcgctc gccagattct tcatctcaaa cggatcggcc ttcagatcat
     3121 agagttcatc cataccgtcc agctcgaggt agtgaatgta tttccaattg tcagcgcgca
     3181 ctgcctggta gcccatctgc aaaatgcgag gaaagacctt gtctgagtaa tattcaatta
     3241 gaaaggaatt tcgccaggcg cgccggctac cgctcaacag aggcacgagc gaatggccct
     3301 caatagtctt cggtaccggt acgcgtgcta attccaaaat tgttggcgcc aggtcaatgt
     3361 taagagccgg ctcgtttcgc acagtgccgg gccggattcg tttgggatat cgcacgagca
     3421 aaggcatgcg gattgattct tcatatgcga gtcgtcgctc gacgctgagt ccgtgttcac
     3481 cgtagaagta gccgttgtca ctcgcaaaca ctattaccgt gttgtcgagt tggcccgtct
     3541 gtttcagggc ggtgaggatt tcaccgactc cttcttcaac cgccattaat gaacgctgcc
     3601 gggcgagtat cgcttcgtca ctggtgacgg tgcgtgctcc gaggggcgtc aggttgccga
     3661 tccggcgctg caataccggc ttgtcctctg gcacccgtcc gtaactcggt cgccgtggaa
     3721 ttctcgcgcc ggcgtagagc ctccgatgcc ggtcggccgg gataaaaact tctgcgtgcg
     3781 ccaggttgac gcttccgtca tcgtgctgca tcacttcggg atggattgcc ttatgcgcca
     3841 gataaatcag aaatggtttg tcgtgtcgcc gtttgatgaa atccacggca tggccggtca
     3901 gtaaatcggt gatgtagccg gaacccttaa tcgagacgcc atcaatgttg aaatcaggat
     3961 cgagataaga gccctggcct ttgaaactca cccagcgatc aaacccggga cgcggggtgt
     4021 cgtcgtttcc catatgccac ttgccgataa acgcggtttc gtagcccgct tgtttcaaca
     4081 gcagcggaaa tgtaaccaga cgatgacttg cagccgaacg gtcaacgtta tcgatgatcc
     4141 cgtgggtgtg cggatactgt ccggtcagaa agccggcgcg cgaaggcgag cagagtggcg
     4201 tggtcatgaa ggcattaggg aagaacgcgc cttctcggcc cagccgatct atgtttggtg
     4261 tcttaaggta aggatgtccc gcgatgccga gctcgtccca ccgtaaatcg tcaaccagga
     4321 taaaaacgat gttaggtcgg gagttgacgg aacgagactg gttggcaaag cgcgagcccg
     4381 gaaagatcag aaggtgacaa actaagagga cgccgacgac taaacgagtg atgtccttcc
     4441 gcatcaatct ctgccaccct tgccgcttca tcgctacttg gatttccgcg aggttgaacg
     4501 cagtcctttc ctgctagttt tcgggatgaa gatagaaaac cttgctgat
//
LOCUS       DATDBY010000562         4588 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1281371, whole genome shotgun sequence.
ACCESSION   DATDBY010000562 DATDBY010000000
VERSION     DATDBY010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4588
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1281371"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2268)
                     /locus_tag="VIT19_10550"
     CDS             complement(<1..2268)
                     /locus_tag="VIT19_10550"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839463.1"
                     /translation="MNDFREKNAVVDLERARAHLRSRGKASAEELYAELESIRELLDR
                     GMSSEARTRLNSLTARAANQPAVLAEARCVLSIALEMLGQYRDSFAAVSTYESTEARA
                     KLDPSLGTKITVQIALAHTNNGDHPKAIGLLNNALRSLPEEGPEVGSVYTALARTYRK
                     IAEYNIARDYSRRALESYRLSGDWRGLTEAYFGLGLADLHEGHYESSLENLEQAAKLV
                     GDRQASYVLGRIYVNTAGACWFLKRPHDGIQYLEKGISYFERTEHKASAAEGYNNLGI
                     NLILIGQWERGQEALDRALALATEVDENYGRIPMILDSLGELRMLRGDLDEAKGYLDR
                     AVELAKQHANKWYEGQALRTLSKCYLAMGQTSDALASGTSALEIAKHIADRNAVCESQ
                     LIVAEASLALGDLETCSANLKDVAEQLTDSTADLLLVGEAQRLHGLEEMSRKDPEMAA
                     QHFGRSVSIFDLLGDRYRAARAHYELGRAYTLSQSDRAAEQLARAVNTFRELGARLDL
                     ERAETATRELESRLVGTPAARHEHSALSQLLTLRLTEAVASRALLLRELAAVIHQETN
                     AKRILILDPEEEGRQRVVVAHGLENNAATALADEYASADTDAAQAAFVKKHDVAVITL
                     KSNDALPATLLISPASRAELPNGVSLDPLLRVVELGMDVCALRSRTSLSQRSDDGNTL
                     SGASLMPGFIHSSPAMTRLVEEVHKIRSSDVTVLVTGESGTGKELVARAIHAISSRRD
                     KIFVPFNCTAVPKELS"
     gene            2577..4043
                     /gene="ffh"
                     /locus_tag="VIT19_10555"
     CDS             2577..4043
                     /gene="ffh"
                     /locus_tag="VIT19_10555"
                     /inference="COORDINATES: protein motif:HMM:TIGR00959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEY5839464.1"
                     /translation="MFESLSDKLKRTLKNLRGEGVLTKEHVDAALREIRLALLEADVN
                     YKVAKDFIASVKEKAEGQQVWLELKPSEQVVKIVFDELVELLGGQSSRLVFTKTAPNT
                     VMIVGLQGSGKTTSTGKIARWLAANQQRKPLLLSTDVYRPAAREQLKVIAKATGQSIF
                     EKPETNDPLELTREALKHARDTGYDTLLIDTAGRLHIDDELMEELVNIKNETHPVEIL
                     FVADAMTGQDAVRSAEEFHARIGITGVVLTKMDGDARGGAALSIKQVIGQPVKFVGVG
                     EKYDALEPFYPDRVAQRILGMGDVLSLIEQVQDKIDQDDAEAQLKKLQKNQFTLDDFR
                     SQLRQVKKLGSFSKILKLLPDQLLGGVGMPDLTDEQSALMEKEMRRTEAIIDSMTREE
                     RTNHLILNANRRRRIARGSGSTVQQVNSLIKQYTEMRRMMQQLSSSGMFGGGGVGGKM
                     MRRMAGMPGMDGGTGDPMMPGLPAGPSRKKKKKKKKRR"
     gene            4094..4369
                     /gene="rpsP"
                     /locus_tag="VIT19_10560"
     CDS             4094..4369
                     /gene="rpsP"
                     /locus_tag="VIT19_10560"
                     /inference="COORDINATES: protein motif:HMM:TIGR00002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEY5839465.1"
                     /translation="MLAIRLMRMGAKKRPSYRIVVKEKQSKRDGAYLENLGTYNPTRE
                     PAEINLRADRVEYWIGKGAQPTDTVRRLIKQAAKNQASAGESQAEAA"
BASE COUNT         1017 a         1274 c         1360 g          937 t
ORIGIN      
        1 cgaaagttct ttcggcactg cggtgcaatt gaacggcacg aaaattttgt cgcggcgcga
       61 agagatcgcg tgaatcgccc tggcaaccaa ctctttgccg gtgcccgact cacccgttac
      121 cagcaccgtc acgtctgacg aacgaatctt gtgtacttct tcgaccaggc gcgtcatggc
      181 cgggcttgaa tgaatgaaac cgggcatgag gctcgcgccg cttaaggtgt tgccatcgtc
      241 tgagcgttgg ctcaacgaag tccgtgagcg taaagcgcag acatccattc ccaattcaac
      301 tacgcgcaga agtggatcga gcgatacgcc gttgggaagt tccgcacgac tcgcaggcga
      361 aatcaaaagc gtcgccggca aggcatcgtt cgactttagc gtgataaccg cgacatcgtg
      421 cttcttaaca aacgcggctt gcgcagcatc cgtgtcagcc gaggcatact catcagcaag
      481 cgcggtcgcc gcattgttct caagcccatg ggcgactacg actcgctggc ggccttcttc
      541 ctctgggtcg aggatgagaa ttcgcttcgc attggtttcc tgatggatga ccgccgccaa
      601 ctcgcgcagc aacaaggccc gcgaggcaac cgcctcagtc agacgcaggg tcagcagttg
      661 tgacagcgcc gaatgttcat ggcgcgcagc cggcgtcccc acgagtcggg attccagttc
      721 gcgcgtagca gtttcagctc gctccagatc aagccgagcg ccaagttcgc ggaatgtgtt
      781 aaccgcacgc gctaactgtt ccgcggcgcg gtccgactgg ctcaacgtgt acgctctgcc
      841 gagttcgtag tgggcgcgcg ctgcgcggta acgatctccc aacaggtcga agatcgaaac
      901 gctgcggccg aaatgctgtg ccgccatttc cggatctttc cgagacatct cttccaggcc
      961 gtgaagtctt tgcgcttcac ccaccagcaa caagtcagcc gtcgaatcgg taagctgttc
     1021 cgcgacgtct ttgaggttgg cgctgcacgt ctcgagatca ccaagcgcga gagatgcttc
     1081 cgccacgatt aactgtgatt cgcagacggc gttacggtca gcaatatgct tcgcaatttc
     1141 gagcgcgctt gtgccgctcg ctaaagcgtc gctggtttgc cccatcgcga ggtaacactt
     1201 gctcaacgtc cgcagggcct ggccttcgta ccacttattc gcatgttgct tggctaattc
     1261 gaccgcgcga tcgagataac ccttggcttc gtcgagatca ccacgcaaca tgcgcagctc
     1321 gccgagcgaa tccagaatca tcggaatccg cccgtagttc tcatcaacct cagtcgccag
     1381 cgccagcgct cgatcgagcg cttcctgtcc gcgctcccat tggccgatca aaatcaggtt
     1441 gatgcccaga ttgttgtagc cttcggcggc gctggctttg tgctccgtgc gctcgaagta
     1501 gctgattcct ttttccagat actgaattcc atcgtgtggc cgcttcagga accagcaagc
     1561 gcccgcggtg tttacgtaaa tgcggccgag cacatagctg gcctggcgat cgcccactaa
     1621 tttggcggct tgctcaagat tttcaagtga gctttcgtag tgtccctcat gaagatcagc
     1681 gagtcccaaa ccaaagtaag cttctgtcag ccctctccag tcgccggaca ggcggtaact
     1741 ctccaacgcg cgtcgtgagt aatcccgcgc gatgttgtat tcagcgatct ttcggtaagt
     1801 gcgggcgaga gcggtataaa ctgaaccgac ctcgggaccc tcttcaggca gtgaccgcaa
     1861 agcattattc aacagcccaa ttgctttggg atggtcgccg ttattggtgt gcgccagagc
     1921 gatctgaaca gtgatttttg tgcccagtga cgggtccaat ttagcgcgcg cttcagtgga
     1981 ttcgtacgtg ctgaccgccg cgaacgaatc gcggtactgg cccagcattt cgagtgcgat
     2041 tgaaagaacg caacgcgctt ctgccagcac cgccggctgg ttggcggcgc gggccgtgag
     2101 cgagttcagc cgcgtgcgag cctcagacga cattccgcga tcgagcaatt cgcgaattga
     2161 ttccaactca gcgtacagct cttcagccga tgctttcccg cgcgaacgca ggtgcgcgcg
     2221 tgcgcgttcg aggtcaacta cagcgttctt ttctctgaag tcattcaaaa ggggaacctt
     2281 ctggccgcaa gtggccgcga atttatgttg ctgaaagtag caataaacga ggaatgactt
     2341 acacttttca cgttcgaacc cacggggcag gtttatgcag gtgatgagag agtcacccac
     2401 gcttgccgca agacgccctg aaaatagcac gagtttcctc aggcgtcacg aaattcgccc
     2461 gcccaatagt gttcacaaac acgggcccgg atcgatagtc ggtcgattcc ttgacacccc
     2521 tcagaccgcc acttatcatg cttgtttccg cgtctgccgg gattgttgtc tgatgtatgt
     2581 tcgagtcgct ttctgacaaa ctcaagcgga cgctgaagaa cctgcgcggt gaaggcgtcc
     2641 tcacgaaaga acacgttgac gcggcgctgc gcgaaatccg tctggccctg ctcgaagccg
     2701 acgtaaatta caaggtcgcc aaggatttca tcgcctcggt caaagaaaag gccgaaggac
     2761 agcaggtttg gctggaatta aagccgtccg aacaagtcgt caagattgtt tttgatgaac
     2821 tggttgaact gctcggcggg caatcatcgc ggctggtttt cacaaaaacg gcgccgaata
     2881 cggtgatgat cgtcggcctg cagggttcag gtaagacgac ttcgaccgga aagattgcgc
     2941 gatggctggc ggcgaatcag cagcgaaagc cgctgctcct ttcgaccgac gtttaccggc
     3001 ccgcggcgcg cgaacagttg aaggtcatcg cgaaggcgac cggccaatcg atctttgaaa
     3061 agcctgaaac gaacgatccg ctggagttga cgcgtgaggc tttaaagcac gcgcgcgaca
     3121 ctggttatga cacgctcttg atcgacacgg ccggacgcct tcatatcgac gatgagttga
     3181 tggaggagtt ggtcaacatc aagaacgaaa cgcatccggt cgaaattctt ttcgtcgccg
     3241 atgccatgac cggccaggac gcggtcagat cagcggagga gtttcacgcg cgcatcggaa
     3301 ttacgggcgt cgtgttgacg aagatggatg gagacgcacg cggcggcgcg gcgctctcga
     3361 tcaagcaagt catcggacag ccggttaagt tcgtgggcgt cggcgagaag tacgacgcgc
     3421 ttgagccgtt ctatcccgat cgggtggccc agcgcatcct gggaatgggc gacgtgctgt
     3481 cgctgatcga acaggtccag gacaagatcg atcaggatga cgctgaggcg cagcttaaga
     3541 agctacagaa gaatcaattc acgctcgacg atttccgttc gcaactcagg caggtaaaga
     3601 agctcggttc tttctcaaag attctgaagc tgctgccgga tcagctgctg ggcggcgttg
     3661 gcatgccgga cttgaccgac gagcagtcgg cgctgatgga aaaagagatg cgccgcactg
     3721 aggcgatcat tgattcgatg acgcgcgaag agcgcacgaa tcacctgatc ctgaacgcaa
     3781 accggcggcg tcgcatcgcg cgcggatcag gctcaacggt gcagcaggtg aattcgctga
     3841 ttaagcagta caccgaaatg cgccggatga tgcagcagct ttcgagttcg ggaatgtttg
     3901 gcggcggcgg cgtaggcggc aagatgatgc gtcgcatggc cggcatgccg ggtatggatg
     3961 gcggcaccgg cgacccgatg atgcctggtt taccggcggg cccgtcgcgc aagaagaaga
     4021 aaaagaagaa gaagaggcgg tgatccgccg tttagaggcg ggcgttcccg ccgattagtg
     4081 aaggagaaat aacttgttag caattagatt aatgcgaatg ggcgcgaaga agcgccccag
     4141 ctatcgcatc gtagtcaaag aaaagcagtc gaagcgtgat ggcgcgtacc tcgagaatct
     4201 tggtacgtac aatccgacgc gcgagcccgc ggaaatcaat ctcagggccg atcgggtcga
     4261 gtactggatc ggtaagggcg cgcagccgac ggacaccgtg cggcgcttga ttaaacaggc
     4321 ggcgaagaac caggcgagcg cgggcgagtc gcaggccgag gcggcgtaac tcagtggcac
     4381 agacttcagt ctgtggtcgg gtgatgagaa tcacagacta aagtctgtgc cacaaattac
     4441 cgatgcgcga tacgatcgaa atagtagtca aggctctcgt cgatgacagc gacgctgttg
     4501 acgtgcgcga gattgaccgc aatggcacca cgaggatcga ggttcgcgtg gcgccgccag
     4561 atatgggcaa ggtcattggt aagcaggg
//
LOCUS       DATDBY010000563         4094 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_297505, whole genome shotgun sequence.
ACCESSION   DATDBY010000563 DATDBY010000000
VERSION     DATDBY010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4094
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297505"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VIT19_10565"
     CDS             <1..184
                     /locus_tag="VIT19_10565"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY5839466.1"
                     /translation="VLVQVAEEWRADCIFLGATGLSNRLEKFLLGSTAAAVAARAHCS
                     VEVVRTRRRKRKTNGN"
     gene            257..721
                     /locus_tag="VIT19_10570"
     CDS             257..721
                     /locus_tag="VIT19_10570"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY5839467.1"
                     /translation="MRILIGVDGSAYSDAALDEVAKRTWPKPSDILVVHAFELPLAAA
                     PEVWALPLDYFERLDSLCRKQADEIIKAAEAKLSGLAGTATINSKSVLGAPKSVILEE
                     AEKWKPDLIVVGSHGYPTWERLLLGSVSQAIVAHAKCSVEVVRMPAPRQAAA"
     gene            732..1856
                     /locus_tag="VIT19_10575"
     CDS             732..1856
                     /locus_tag="VIT19_10575"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5839468.1"
                     /translation="MAKVLILGGGFSGVVAAESLAKELGDGHQITLVSRSDQFLFYPA
                     LVRLAFGQCEPDEVSFDLRRSMLNRRITFIEGEVARINADDREVIIAHGDITGTVPYD
                     YLIFALGRRLATERVTGFFEHAHHLLDLNGALKFGEAVRNFQGGRVIIGQCPGARLPV
                     PVYESAFALARWVDENSDREKTTITIINPGPSGSEFDDRKLTELLAASLQKQRIEYLP
                     NLQVSRVTSSTVITDDGRQLDYNLLMLLPPFRGSSAAARLGITSGDDYVNVDWNMKVI
                     GLDRMYAAGDCVNLNGPKMGHLAVHQGEVAAANLAAEIAGHPPVVHYDHDLMTVIDID
                     GESIYFHKDLWTNEPSSIRHGRFWGWAKRIHDQYWRVTHQ"
     gene            1870..>4094
                     /locus_tag="VIT19_10580"
     CDS             1870..>4094
                     /locus_tag="VIT19_10580"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF039222.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5839469.1"
                     /translation="MTPGALPDESKGSSCPIYPSGDVVLRDGSTVRVRVMRPDDEEKL
                     LALFQSLSEEAGWWRFFSIIRGSALAAEAHREVTLANSFALVASTGPEDQVVGHAFYA
                     MLDQHRAEVAFTIADDFQGRGLGTILLGQLAEVAAANGIQIFEAEVVASNHAMIHVFR
                     ESGFPIEVSAAAGQLHVTFPTTFTREAIDRFDRREALTAVNALKLFFNPRAVAVIGAS
                     RKRGTIGGEIFHNLLSFGFQGPVYPVNPTSDLVQSVPAYASVEAIEGPVDLAVIVVPA
                     AYVVEAAAACGRKGVKALVVISAGFSETGKEGQASQVELLRVCREAGMRLIGPNCMGI
                     ANTDLSVQLDATFAPTKPPRGRVGFSSQSGALGLAIMEYANSLGLGLSTFVSVGNKAD
                     ISGNDLLRYWESDENTDVILLYLESFGNPKKFSQIARRVGRKKPIVVVKSGRSTAGAR
                     ATSSHTGALIAASDVTVDALFRQAGVIRTDTLAELFDAASLLANQPLPRGNRVGIVTN
                     AGGPGILCADACEARGLEVPVLSKDIQARLREFLLPGASASNPVDMIASASPEHYGRA
                     VEAVLADPNIDAMIVIFTPPLVTNAEDVARSIVEAVNRTAKDKPILAVFLSPNAAPAE
                     LRLSNPHIPSFAFPETAAIALARAARYRDWREQPESWPPAFEDLRRDEAAAIVATALL
                     RGDGWLTADEIEKLFSCYGLPLIEQKIVGGPDEAGEVAEQFASEVALKVIAPDVIHKT
                     EA"
BASE COUNT          867 a         1094 c         1221 g          912 t
ORIGIN      
        1 agtgctcgtt caggtcgccg aggaatggcg agccgactgc atctttctcg gcgctacggg
       61 tttgagtaat cggcttgaga aattcctgct cggcagcacc gccgcagcgg tagcggcgcg
      121 cgcgcactgc tcggtcgaag tcgttcgtac cagaagacgc aaacgaaaga cgaatggtaa
      181 ttgaaaacgg aaggaaataa tggcgcagcg atagagtttc gctacttcgg ctccgccagc
      241 aagagaggta cacatcatga gaatactaat tggcgttgat ggttcagcat acagtgatgc
      301 ggctttggac gaagtcgcaa agcgaacgtg gcccaaaccg tcggacatcc tcgtggtaca
      361 cgcgtttgaa ttgccgctcg ccgcagcgcc ggaagtctgg gcgcttccgc ttgattactt
      421 cgaacggctc gacagtcttt gtcgcaagca agctgatgaa attattaaag ccgcggaagc
      481 aaaactgtcg gggctggcag gcacggcgac gatcaacagc aagtcagttt tgggcgcacc
      541 gaagagtgtc attcttgaag aggctgaaaa atggaagcct gatctgatcg tggtcgggtc
      601 gcacggttat ccgacgtggg agcggttact tctcggctca gtctcgcagg caatagttgc
      661 ccatgcgaaa tgttcagttg aagttgtccg catgcccgcc cccaggcagg cggcagcgta
      721 ggaattgtgt gatggcaaaa gttctaatac tcggaggcgg ctttagcggt gtcgtcgctg
      781 ctgaatccct ggctaaagag ttgggcgacg gtcatcagat cacgcttgtc tcccgcagcg
      841 atcagtttct tttctacccg gcactggtca gattggcctt cggacaatgt gagcctgacg
      901 aagtctcttt tgacctgcgc agatcgatgc tgaaccggcg gatcactttc attgaaggtg
      961 aggtagcgcg gattaacgcg gacgaccggg aagtgataat tgctcacggg gatataaccg
     1021 gcactgtccc ttatgactat ctcatcttcg ctttgggccg gcggctggcc actgaaaggg
     1081 ttaccggatt tttcgaacac gcgcatcacc ttcttgatct gaacggtgct ctcaagttcg
     1141 gtgaagctgt tcggaatttt cagggcgggc gggtcatcat cggtcaatgt ccgggcgcgc
     1201 ggcttcccgt tccggtttac gagtcggcat ttgcgttggc gcgctgggtc gatgaaaaca
     1261 gcgaccgtga gaagacaacc attacgatca ttaatcctgg tccttccgga tctgagtttg
     1321 acgataggaa gctgacggaa ctcctggccg cttctttaca gaaacagaga attgaatacc
     1381 tgcctaatct tcaagtcagc cgggttacat catcgacagt cataaccgat gacggccgcc
     1441 aacttgatta caaccttctg atgttacttc cacccttccg gggctcgagc gcggccgcgc
     1501 ggctcggtat taccagtggg gacgactacg tcaatgtaga ctggaacatg aaagtcatcg
     1561 gactggatcg aatgtacgca gccggcgact gtgtgaacct caacggccca aagatgggac
     1621 acctggcggt tcaccagggc gaggtggccg cggctaatct agccgccgag atcgccggcc
     1681 acccgccggt agttcactac gatcacgacc tgatgacggt catcgacatt gatggcgaga
     1741 gtatctattt ccataaggat ctctggacaa acgagccatc aagtattcgg cacggccggt
     1801 tttggggttg ggcaaaacga attcatgacc agtattggcg cgtgacacat caatagtaga
     1861 ctcctgaaca tgacaccagg cgcgttacca gacgagtcaa aaggctcttc gtgtccgatc
     1921 tatccgtccg gcgatgtcgt gctccgtgac ggttcgactg tgcgggtgcg cgtgatgcgc
     1981 cctgacgacg aagagaagct gctcgcgctg tttcaatcgc tgtcggagga agcaggctgg
     2041 tggcgattct tttctatcat aagagggtcg gcgctggctg cggaagcgca tcgcgaagtc
     2101 accctcgcta attcatttgc gctggtcgca tcgactggtc cggaagatca agtggtgggg
     2161 catgcctttt acgcgatgct tgaccagcat cgcgcggaag tcgcgttcac catcgccgat
     2221 gattttcagg gcagaggctt gggaacaatc ctgctgggcc aattggccga agtagctgcg
     2281 gcgaacggaa ttcagatatt tgaggcggaa gtcgtggctt cgaaccacgc gatgattcac
     2341 gtgttccgtg aatcaggttt tcccattgaa gtaagcgcgg ctgccggaca actccatgtg
     2401 acttttccga caaccttcac ccgggaagcg attgatcgct tcgaccgccg cgaggcgcta
     2461 accgccgtta atgctttgaa acttttcttc aacccgcgcg ccgtggcggt gattggcgca
     2521 tcgcggaagc gcggcactat tggcggagaa attttccata accttcttag cttcggattc
     2581 cagggacccg tctatccggt caacccaact tcagacctgg tgcaatcagt tccggcatac
     2641 gcatcggtag aagcgattga gggcccggtg gatctggcag ttattgtcgt tccggctgcg
     2701 tacgtagttg aggctgcggc tgcttgcgga cgaaaagggg taaaggcctt agtcgtaatc
     2761 tcggcgggct tttcagagac cgggaaagaa gggcaagcga gccaggttga gttgctgcga
     2821 gtgtgccgcg aagccggcat gcgtctgatt ggtccaaact gcatgggcat cgcaaatacg
     2881 gatttgtcgg tgcagcttga tgcgaccttc gcgccaacca aaccgccgcg tggccgcgtc
     2941 ggcttctcct cacaaagcgg cgccctgggc ctggcgatca tggagtatgc gaattcgctg
     3001 ggactcgggc tctcgacgtt cgtttccgtc gggaataagg ctgatatttc tggaaacgat
     3061 ctgttgcggt actgggagtc cgacgaaaac acggacgtaa ttctgcttta ccttgaatcg
     3121 ttcgggaacc caaaaaagtt ttcgcagatc gcccgccggg tcggacgaaa gaaaccaatc
     3181 gtcgtagtta aaagtggccg ctcgaccgcc ggcgcccgcg ccacgtcatc ccacacgggg
     3241 gcattgatcg cggcttcgga cgtcaccgtc gatgcattgt tccggcaagc cggcgtgatt
     3301 cgcaccgaca cgctcgcaga gttgttcgac gcagcttcgt tgctggcgaa tcaaccgttg
     3361 cctcgaggta accgcgtcgg catcgtcacc aacgcgggag gtcccggcat tctttgcgcc
     3421 gatgcttgcg aagcgcgcgg cctggaagtt ccggtgctta gtaaagacat ccaggcgcgt
     3481 ctgcgcgagt tcttgctgcc cggcgcgagt gcgtcaaatc ccgtcgacat gatcgcatca
     3541 gcttcgcccg agcattacgg tcgcgccgtt gaagctgtgc ttgctgaccc taacatcgac
     3601 gcgatgatcg taatcttcac accgcctttg gtcaccaatg ccgaagatgt tgcgcgctca
     3661 atagttgaag cggtaaatcg aaccgcaaaa gacaaaccaa ttctggctgt cttcttatcg
     3721 cccaatgccg cgccggcaga gttgcggctc tcgaaccctc atattccgtc gtttgctttc
     3781 cctgagactg cggcgatcgc actggcgcgc gccgcacgtt atcgcgattg gcgtgagcag
     3841 cccgagtcct ggccgccggc ttttgaagat ttaagacggg atgaggcggc cgcgattgtg
     3901 gcgacagctc ttttgcgcgg tgacggatgg ttgaccgcgg acgagatcga gaaactgttt
     3961 tcctgttacg gcttgccgct gatcgagcag aaaatcgttg gtggcccgga tgaggcaggg
     4021 gaggtagccg agcaattcgc cagcgaggtt gctttgaagg taatcgcgcc ggatgtgatc
     4081 cataagaccg aagc
//
LOCUS       DATDBY010000564         5077 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1890837, whole genome shotgun sequence.
ACCESSION   DATDBY010000564 DATDBY010000000
VERSION     DATDBY010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5077
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1890837"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            290..754
                     /locus_tag="VIT19_10585"
     CDS             290..754
                     /locus_tag="VIT19_10585"
                     /inference="COORDINATES: protein motif:HMM:NF019247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1579 domain-containing protein"
                     /protein_id="HEY5839470.1"
                     /translation="MQNEFLKLLVGSWEGPCQTWFEPEKLADESRVKGEFRPLLDGRF
                     IRHTYEGEMQGKPRHGEETIAWNSVDQRFEVAWVDDFHMNYAILFSQGEAMARGFAVN
                     GKYDTGPNEPQWGWKTVYELIDDDHVTITAYNITPDGEEGKAVETVYTRRKE"
     gene            876..1421
                     /locus_tag="VIT19_10590"
     CDS             876..1421
                     /locus_tag="VIT19_10590"
                     /inference="COORDINATES: protein motif:HMM:NF025227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4199 domain-containing protein"
                     /protein_id="HEY5839471.1"
                     /translation="MKKIVLIFGLISGALMAIFMFATMPFIDKIGFDKGLIVGYTNIV
                     LAFILVFFGIRSYRENVNGGAVTFGRAFMIGILITLISSVCYVIAWQILFHNFMPDFF
                     DKYAAHVIEKARASGATPEAIQSQTQEMDQMKQLVKNPFFHNLFVFLEPFPVGLVITL
                     ISSLILRKRKPAHDAPTAAVQ"
     gene            complement(1439..1564)
                     /locus_tag="VIT19_10595"
     CDS             complement(1439..1564)
                     /locus_tag="VIT19_10595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839472.1"
                     /translation="MSIGVSVRSDYFAPLSAQEIRLGRLTQAVGLGYFIARRKRF"
     gene            1843..3747
                     /locus_tag="VIT19_10600"
     CDS             1843..3747
                     /locus_tag="VIT19_10600"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEY5839473.1"
                     /translation="MNRFVFCFCLLITLAITVNAQDVHSYANPSAVRVRHVDLDWDVL
                     FDQKILKGSATLTIERTSRTEPLILDTRDLKIEKVETSAGGRAYAPGTFTVGASDKIL
                     GSSLTIPLPGGATRVRIHYSTSPGASGLQWLAPAQTAGKKDPFMFTQSQAIHARSWIP
                     LQDTPSVRVTYNARVRTPRNLLAVMSAENDARTLRDGDYSFRMRQPIPSYLIALAVGD
                     LRFRSLGRRTGVYAEPQVIARAARELSDTERMVVATERLYGPYRWGRYDILVLPASFP
                     YGGMENPRLTFATPTILAGDKSLVSLIAHELAHSWSGNLVANATWRDFWLNEGFTTYL
                     ERRIQEAVYGRARAEMEATLGLRDLNEVIASLEDRDEILHIDLKGRDPDEGSNDIPYE
                     KGALFLLHLERTFGRTRFDQFLKNYFNHFAFQSITTEQFVAYLKQNLLDKHATHAPPV
                     PIDEWINKPGIPANAPKPTSPAFARVEEQAALWLRRQITAAQIGAAKWNTQEWLHFLK
                     FVQDQLAKGFEGDRVDLSVRPGTAPPGARMEELDNAFRLTQSGNSEIAFQWLLMSIRN
                     RYDPAYPRLEEFLLSVGRRKFIRPLYQELAKTPAGKQRAMEIYRRARPTYHPIAVTSI
                     DADLKWPSGQ"
     gene            complement(3765..4931)
                     /locus_tag="VIT19_10605"
     CDS             complement(3765..4931)
                     /locus_tag="VIT19_10605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839474.1"
                     /translation="MKSAATKLAPPVNVPNPMEIMVSNVEALYAAVNNVKNAGKTIVL
                     KAGTYVLTRHFPPAKLTNERPNQGRLELQRNMSLRGSGIRRREEIPSLCVLETSPTDT
                     PHFDVVPGARSGMIRTGRGNHTIANLKIIAPPKAGSGISTDLPDRKSQETTIRISKVI
                     SGDPNSEHGTRGVDIRNTGTAVVGRHLKAFIQKCEFHGGTQGIRIANFQGANGCQVTV
                     EMSDNHCHDNFAGCLITNHRSTSGVIEVRSERDRFTENGVGCTVIGGIVNGSSNRTKF
                     VANKIVSQSNNGPLDQATRHAGGIVVRGANTLEPNLASDNQVEIVFTDCIVNSNQAPG
                     NVLAHGAHCSNPAGVAGKNNKVTVSLQGNNDFTVDPTNSEPPESPPETNSVTVT"
BASE COUNT         1085 a         1391 c         1384 g         1217 t
ORIGIN      
        1 gaaggagctg agactgattc catgatgtgg agtgcgccgg cagagcgaag cgtcgacggc
       61 gctttggagt tgtttaattt gcgcctcaag ccatatccaa agcgccgccg ttgtcggcgc
      121 actccaaata ttccctcacc caaaaggatg attctcttgc cttcaaacgc ctaaatcacc
      181 ctaaagtatg acgacttcca cttagcgttt cgctaatctc acggcgaatt gagcagcagg
      241 ccgagcgtga ggatgcgtct ccaattcaaa acttcaaaag agggaaacta tgcaaaacga
      301 atttctaaag ttacttgttg gttcatggga aggaccttgc caaacatggt ttgagcccga
      361 aaaactcgct gacgagtcga gagtcaaggg cgaatttcgc ccgctgctcg acggacgttt
      421 cattcgtcat acctatgaag gcgaaatgca gggcaaaccg cgacacggcg aagagacgat
      481 cgcctggaat tcagtggatc agcgtttcga agtcgcctgg gtggatgact ttcacatgaa
      541 ttacgcaatt ttgttttctc aaggtgaagc aatggcgcgt ggattcgccg tgaacggcaa
      601 atacgatacc ggcccgaatg agccgcagtg gggatggaaa acggtgtacg aactgattga
      661 tgatgatcat gtcacgatca ccgcctacaa catcactccg gatggggaag aaggtaaagc
      721 cgttgagacc gtttacacgc gccgtaagga gtgaagacct ccggtgggta cgcactcctc
      781 tggagtgcag cacgccggag gcgtgcgtac cgctgcggat taacacgccg gtcagctcgt
      841 agcagcttct tacgtaactt cgaaaggatt cttcaatgaa aaagattgtt ctgatcttcg
      901 gtctcatttc cggcgcgctg atggcgatct tcatgttcgc gaccatgccg ttcatagaca
      961 agatcggttt tgacaagggc ctaatcgtcg gctacacgaa cattgtgctc gccttcatac
     1021 tggttttctt cggtatccga tcatatcgcg agaacgttaa cggcggcgcg gtgacctttg
     1081 gccgggcctt tatgatcgga attctgatca cactgatctc gtcagtctgt tacgtgattg
     1141 cctggcagat tctctttcac aacttcatgc ccgacttctt cgacaagtat gcggcgcatg
     1201 tcatcgaaaa agcgcgcgcg tcaggcgcca ctccggaagc gatccagtcg cagactcagg
     1261 aaatggatca aatgaaacag cttgttaaga accctttttt ccacaacctg ttcgtttttc
     1321 tcgagccgtt tcccgtcggg ctggtgatta cgcttatttc gtcgctgatt ctgaggaagc
     1381 gaaaaccggc acacgacgcg ccaacagcgg cggtgcagta gccagatcgt aaagggagtt
     1441 aaaagcgctt acggcgcgcg atgaaatagc ccaggccaac ggcctgggtt aaccggccaa
     1501 gtcgaatttc ctgagcgctc agcggcgcga aatagtccga acgaactgag actccgatgc
     1561 tcaatcgcta ccctccgttc tgcgcacttg gtccagcaca gaaatcgcga cccggcgata
     1621 tagttgggat ttagttggta tctcgcgctt tcagcgctca ccggccttaa tcgaacgttg
     1681 tcctgggccg ctggcccagg cttctgcatg ccgcgccctt ggcgcttttc ataccgagtc
     1741 gtaagactaa ttctctctca ccactttcct aatctctcta acccgcgcta atctgtggct
     1801 tcaaccctct cgtcgaaact gcttaaatct gtgggaatga tcatgaaccg tttcgtcttt
     1861 tgcttctgtc tgctaatcac acttgcgata actgttaacg ctcaggacgt ccattcctac
     1921 gcgaacccat ccgcggtgcg cgtgcgtcat gtcgatctcg actgggacgt gctgttcgat
     1981 caaaagattc tcaaaggctc agcgacgttg accatcgagc gaacctcgcg caccgaaccg
     2041 ctgattctcg acacgcgcga tttgaagatc gagaaggttg agacttctgc cggcggcagg
     2101 gcgtatgcgc ccggaacgtt cacggtgggt gcgagcgaca agattcttgg ttcgtcgctg
     2161 acaatcccct tgcccggagg tgccacacgc gttcgcattc attactcaac ttcaccgggc
     2221 gcttcaggtt tgcagtggct cgcaccggcg caaaccgccg gcaaaaaaga tccgttcatg
     2281 ttcactcagt cacaggcgat tcatgcgcgc agttggattc cattgcagga cacgccgtcg
     2341 gtgcgcgtga cttacaacgc gcgcgtgcgc acgccgcgga acctgcttgc ggtgatgagc
     2401 gccgagaacg atgcacgtac tctacgcgat ggcgactaca gctttcgcat gcgtcaaccg
     2461 atcccttcat atttgatcgc gctcgccgtg ggtgatctgc gttttcgcag cctgggccgg
     2521 cgcaccggtg tttacgccga acctcaagtc attgcgcgcg ccgcgcgtga gctcagcgac
     2581 acggaacgaa tggtggtcgc gaccgaacgg ctctatggtc cctatcgctg gggccgctac
     2641 gacattctgg ttttgccggc cagctttcct tacggcggta tggagaatcc gcgcctgacg
     2701 ttcgccacgc cgacgattct ggcgggcgac aagagtctcg tctcgctcat cgcgcatgaa
     2761 ctcgcgcatt cgtggtcagg taatctggtg gcgaacgcga cctggcgcga cttctggctc
     2821 aacgaaggct tcacgactta tctcgaacga cgtattcagg aagccgttta cggtcgcgcg
     2881 cgcgccgaga tggaagcaac cctgggcctg cgcgatttga atgaagtgat tgcgtcgctt
     2941 gaagaccgcg atgagattct gcacatcgat ctgaagggtc gcgatccgga cgaaggctcg
     3001 aacgatattc cttacgaaaa aggcgcgctc tttttgcttc acctcgaacg aactttcggg
     3061 cgcacacgtt tcgatcagtt tctgaagaac tatttcaatc acttcgcttt tcagagcatc
     3121 acgaccgaac aattcgtcgc ttacctgaag caaaatctgc ttgataaaca tgcgacgcac
     3181 gctccgcccg ttcccatcga tgagtggatt aacaagccgg gcatacccgc aaatgcgccg
     3241 aaaccaacct ctccggcatt cgctcgcgtg gaagaacaag cggcgctctg gctacgccgg
     3301 cagattaccg ccgcgcaaat cggagcagct aagtggaata cacaggaatg gctgcacttc
     3361 ctgaagttcg ttcaggatca acttgccaaa gggttcgagg gagaccgtgt ggacttgtca
     3421 gttcgccccg ggaccgcgcc tccaggcgca cgtatggaag aacttgataa cgcctttcgc
     3481 ctgacccaat caggcaattc cgagatcgct tttcagtggc tgctgatgtc gattcgaaat
     3541 cgttacgatc cggcgtatcc gcgtctggag gaattcctct tgtcggttgg tcgccgcaag
     3601 tttatccggc cgctgtatca ggagctggcg aaaacgcctg cgggcaaaca gcgcgcgatg
     3661 gagatttatc gtcgtgcacg tccgacttat catccgatcg ccgtcacgtc gattgatgcg
     3721 gacttaaagt ggccctctgg gcagtaattc cgcaaccccc gggatcaagt cacggtaacg
     3781 gaattagtct ctgggggcga ctctggcggc tcgctgttgg tcgggtcgac tgtgaagtcg
     3841 ttgttaccct gcagtgagac agttacctta ttgttctttc cggcgactcc tgccggatta
     3901 gaacaatgag ccccgtgcgc taagacgttc cctggtgcct ggtttgagtt gactatgcaa
     3961 tccgtaaaaa caatctcgac ctggttgtct gaagccaggt tcggttccag ggtgttagca
     4021 ccgcgaacga cgatgccgcc cgcgtgacgt gtggcttggt ctaacggtcc gttgttgctc
     4081 tggctcacaa tcttattggc aacgaatttg gtgcgattag atgatccgtt gacgatccca
     4141 ccaataacag tgcacccgac cccattctct gtgaatcgat ccctctctga acgcacctcg
     4201 atcactcccg acgttgacct gtggttcgta atcaggcagc ccgcaaaatt gtcgtgacag
     4261 tgattgtcgc tcatttctac tgtgacttga caaccattcg cgccctggaa attcgcgatc
     4321 ctaatgcctt gtgtgccgcc atgaaattca catttctgaa tgaaggcttt caggtggcgc
     4381 ccgacaaccg cggtgccggt gttcctgatg tcaaccccac gggttccgtg ttcggagttc
     4441 ggatcgccgg aaattacttt agaaatccta atcgttgtct cctgggattt gcgatcgggt
     4501 aagtcagttg agatgccaga gccggcctta ggcggagcaa taatcttgag gtttgcgatc
     4561 gtatggttgc cacggcccgt tctgatcatc ccggaacgcg cgccggggac tacgtcgaag
     4621 tgtggagtat ctgtcggcga ggtctctagc acacacagtg acgggatttc ttcgcggcgc
     4681 cttataccac taccgcgcag agacatgttc cgctgaagct ccagccgccc ttggttcggg
     4741 cgctcgttgg taagtttggc aggaggaaag tgccgagtca gcacgtatgt tcctgccttt
     4801 agcacaattg tcttgccggc atttttcacg ttatttacag cggcatagag tgcttctacg
     4861 ttcgacacca ttatttccat aggatttgga acgttcaccg ggggggcgag ctttgtggct
     4921 gcgcttttca tgacagcagt ctcctttcaa ttggcgggcc gtccgttagt tagtggacgg
     4981 aatgggttgg tgagtggacg ttggtggtca atcgtcaggg agttgaccgc tgagcgcaat
     5041 ttcttggtac tgtgattagg actgcgcgga tgctatc
//
LOCUS       DATDBY010000565         3564 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2710919, whole genome shotgun sequence.
ACCESSION   DATDBY010000565 DATDBY010000000
VERSION     DATDBY010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3564
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2710919"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..868
                     /locus_tag="VIT19_10610"
     CDS             <1..868
                     /locus_tag="VIT19_10610"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY5839475.1"
                     /translation="GRVLISGESGVGKELVARAVHAQSRRAAAPFIEINSAAIPEELI
                     ESELFGHVKGAFTGATAAKKGKFELADGATLFLDEVSDMSANVQAKVLRVLEEQRFEP
                     VGSNTPVSVDVRVIAATNKKLDEEIEKGAFRSDLYFRLNVIPFEVPPLRERLEDVPSL
                     VEHFNERFAKSYAKKPPRFDPKAIEAMQSYSWPGNVRELRNTVERIVIMHTNHRVGVK
                     DLPAFGSAEPPASSYRFPSFKEASDAYHREFIQRKLDEADGNVSRAAELMGIDRSHLY
                     RRMRALGINVRG"
     gene            1385..1981
                     /locus_tag="VIT19_10615"
     CDS             1385..1981
                     /locus_tag="VIT19_10615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839476.1"
                     /translation="MSGDGSGNRRDRVVETESGDIVVPGRTRISTPDSARPGGNNRGG
                     GNPGGGAGGGNRGGGRDGRHRGGDGDRDRWRDGHRDGRGHRHYRGDQCYQVPTYDDTV
                     SYSAASYPNYDRDDSRSAYDRGYNDGLYTGANDGRRGQTFDPERSHFYNRGTGGYRSS
                     KGDPGDYQMAYRDGFQAGYREGYQNWQIYFVGGVFRRF"
     gene            2011..3066
                     /locus_tag="VIT19_10620"
     CDS             2011..3066
                     /locus_tag="VIT19_10620"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY5839477.1"
                     /translation="MSRRILILPVTLLAIALPAFFVVERAAAQHMDAHHHSPVADVAN
                     VPEVTQDWAKAQLAKSPRHREWVKVKYGNREVNSLVIFPEVKKKATAVVVIHEINGLS
                     DWVQQLTDELAEAGYIAIAPDLLSGMGPNGGGTADVATKGGNAVGQAIRDLPPDQITA
                     DLNAVADYVAKLPAANGKVAVAGYCWGGTQSFRFAMNRPSLKAAFVFYGTTPGSNAQG
                     QPYAVDQAGLARINAPVYGFYAENDMRVNATIPPTKEAMETMKKAWKDASSTPEGKRA
                     EKFIYDPVIYAGAGHGFMRAGEPNAPEPKAPATTGDEAADKKAREDYDKALTMYRANR
                     KARDDAWVRWKGILAKL"
     gene            3247..>3564
                     /locus_tag="VIT19_10625"
     CDS             3247..>3564
                     /locus_tag="VIT19_10625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839478.1"
                     /translation="MTWTEAETSTHQDHVIKHILGATVLGWTIAGEAAHFLLDIGFLW
                     TIYLDGEMNLLPQGVAIAEMDGDDVNSADRTELAFDADLLASEGRDATGLKKFTGAPE
                     ECLI"
BASE COUNT          796 a          981 c         1106 g          681 t
ORIGIN      
        1 tgggcgcgtg cttatctccg gcgaatccgg cgtcggtaaa gagttggtcg cgcgcgccgt
       61 tcatgcgcag tcacgtcgcg ccgcagcgcc cttcatcgaa attaactcgg ccgcaattcc
      121 cgaagagttg atcgagtcgg aattgtttgg ccatgtgaag ggcgcgttca cgggcgccac
      181 cgcggcgaag aaggggaagt tcgaattggc cgacggcgcg acgctctttc ttgacgaggt
      241 ttcggacatg agcgcgaacg tgcaggccaa agtcctgcgc gtactcgaag aacagagatt
      301 cgagcctgtc ggcagcaaca cgccggtcag cgttgacgtg cgagttattg cggcgacgaa
      361 caagaaactc gatgaagaga tcgagaaagg cgctttccgc agtgacttgt actttcgttt
      421 gaacgtcatt cccttcgaag tgccgccctt gcgcgaacgg ctggaagatg tgccgtcgct
      481 cgtggagcat ttcaacgagc gttttgcaaa aagctacgcg aagaagccgc cgcggttcga
      541 cccgaaggca atcgaagcaa tgcagagcta ttcgtggccg gggaatgtgc gcgaactacg
      601 taacaccgtc gaacggatcg tgatcatgca cacgaaccat cgtgtcggcg tcaaagactt
      661 gcccgcgttc ggcagcgccg agccacctgc ttcttcctac cgctttccgt ctttcaagga
      721 agccagtgac gcgtatcatc gtgagttcat tcagcggaaa ctggatgaag ccgacggtaa
      781 cgtctcgcgc gcggccgagt tgatgggcat cgatcgcagt cacctctacc ggcgaatgcg
      841 cgcgcttggc atcaacgttc gcgggtagta gtttggagtt cttaactttc ccgttgcgca
      901 atacgagtgg gggcgtataa tcgcctcgct agccaacatc agctctcctc gacaattgaa
      961 ggttctgtct cgctaagcca gggaggtaca catgaaatca ctcgtagtca ggctgagctt
     1021 gttatcggca gttctgtttt gcgtcgcgtt tgtgacgccg gcaatcgcgc gggcacagga
     1081 cacgaaacca gttcctgaga gtccaccctc tgagcgtaga cctgaaccgc cgcccagtcc
     1141 tcccgcggag agtccgagaa atgatccacc tccccgtccg ccagcggagt cacctcgttc
     1201 tgaaccgcca tcaagtcctc ggacggaagc accgcgctct gatccggcac cgcgatctga
     1261 tccagcaccg agtggcggcg gtagtcggaa caataacggc gggtcgtcga gaggcaataa
     1321 cgacaatcgc cgaaacgata acgaccgccg ccctagcgaa ggcggtggcc gggtacgggg
     1381 atcaatgtcc ggcgatggca gcggcaatcg tcgcgatcgt gtggttgaaa ctgagtccgg
     1441 tgacatagta gttccgggcc gcacgcgcat atcaactccg gacagcgctc gtccgggcgg
     1501 caacaatcgc ggtggcggca accccggagg cggtgccggc ggaggtaatc gaggtggtgg
     1561 tcgcgacggt agacaccgtg gcggcgatgg agatcgcgat cgatggcgag acggtcatcg
     1621 cgatggacgc ggacatcgtc attatcgcgg cgaccagtgt tatcaggtgc cgacttacga
     1681 cgacaccgtc tcgtacagcg cggctagtta tccgaactac gatcgggacg acagtcgcag
     1741 cgcttacgat cgcggctaca acgacgggtt gtacacgggc gcgaacgacg gacggcgcgg
     1801 acagacgttc gatcccgaac gctctcactt ttataaccgg gggaccggcg gctatcgttc
     1861 cagcaaaggc gacccaggtg attatcagat ggcttatcgc gatggctttc aggccggata
     1921 tcgcgagggc taccaaaatt ggcagatata ctttgtggga ggagtcttcc ggcggttttg
     1981 aatggagcca tgcgaacaca caacatcaaa atgtcccggc gaattctcat tcttcccgtg
     2041 acgttgcttg caatcgcgtt gccagctttc tttgtggttg agcgcgcagc cgctcaacac
     2101 atggatgcgc atcatcactc gcctgtggcg gacgttgcga acgtgcccga ggtaactcag
     2161 gattgggcga aggcacaact cgcaaagtct ccgcggcacc gcgaatgggt gaaggtgaag
     2221 tacggcaatc gtgaggtgaa tagcctggtc atctttcccg aagtgaaaaa gaaagcgacg
     2281 gccgtcgtgg tgatccacga gatcaacggc ttgagcgatt gggtgcagca actcacggat
     2341 gaattggctg aggcaggtta catcgcgatc gcgcccgatc ttttgtccgg catggggccg
     2401 aacggtggcg gcacggccga cgttgccaca aaaggtggga atgccgtcgg gcaggcgatt
     2461 cgcgacttgc caccggatca aattacggct gacctgaacg ccgtggcgga ctacgtggca
     2521 aagttgccgg cggccaatgg aaaggtagcg gttgccggtt actgttgggg cggcacgcag
     2581 tcgtttcgct ttgccatgaa tcggcccagc ttgaaagccg cgttcgtctt ctacgggact
     2641 acgccaggca gtaacgcgca gggccaaccc tacgctgttg accaggccgg attggcgcgc
     2701 atcaacgctc ccgtttatgg cttctatgcc gagaacgaca tgcgcgtgaa tgcaacgatt
     2761 ccaccgacga aagaggcgat ggaaacgatg aagaaggcct ggaaggatgc aagcagcacc
     2821 cccgaaggta agagagcgga gaagtttatt tacgacccgg tgatctatgc cggcgccggc
     2881 cacggattca tgagagccgg cgaaccgaac gcgccggagc cgaaagcgcc cgcgacgacc
     2941 ggcgacgaag ccgcggacaa gaaagccagg gaggattacg acaaagccct cacgatgtat
     3001 cgcgccaatc gcaaagcgcg ggacgacgcc tgggtcaggt ggaaagggat ccttgcgaag
     3061 ctttaaacac gaatacgttg tatcttagag aggctcgtcc gcgtggcgag ccttttgatt
     3121 ctcaaaaaga ctagctttac agaaccgcga gcggtagcga gtgggatcaa aacgcacggt
     3181 tcgagtggtg acgctttatc ccgctctcta ccgctcgcgg ttcagtaatc gagtacactg
     3241 taatccatga cctggactga agccgaaaca tcaacacatc aggatcacgt catcaagcac
     3301 atcctgggtg cgaccgtgct cgggtggaca attgccggcg aggcagcgca cttcctgctc
     3361 gacataggat ttttgtggac gatctatctc gatggcgaga tgaaccttct gccgcagggc
     3421 gtcgcgattg ccgaaatgga tggcgacgat gtgaacagcg ccgaccggac ggaactagcg
     3481 ttcgatgccg acttgctggc gagcgaaggc cgggacgcaa cgggactcaa aaaatttacg
     3541 ggagcgcctg aagagtgttt gatt
//
LOCUS       DATDBY010000566         2127 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_663799, whole genome shotgun sequence.
ACCESSION   DATDBY010000566 DATDBY010000000
VERSION     DATDBY010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2127
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_663799"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VIT19_10630"
     CDS             complement(<1..255)
                     /locus_tag="VIT19_10630"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEY5839479.1"
                     /translation="MPSKRNLLAVILGGGAGSRLFPLTRDRSKPAVPLGGKYRLVDVP
                     ISNCINSDVIRMFVLTQYNSASLNRHIATTYRFSPFADGFV"
     gene            complement(309..1346)
                     /locus_tag="VIT19_10635"
     CDS             complement(309..1346)
                     /locus_tag="VIT19_10635"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5839480.1"
                     /translation="MSVLLDKSKAIGRVISVALLLIAIVWTGKTQSPTPAQDDDVLRV
                     ETDLTNLLFTATDKNNRYITTLQESDLRVLEDGVPQKVFTFQRETDRPLSIAFLIDVS
                     ISQERTLPDEKAAARTFIENVIRSEKDQAAIIPFEGYAHVEQPLTRDVISLYRVLERV
                     EVAFPSYIGSAPALTGITSGPGTIGPPSEGSTAIWDSVLLTSRRVLAADPEQRRRAII
                     LLTDGRDTTSRVPRSMAVEHAIATETVIYAIGIGDQKYDGVNKSALREVAERTGGRAF
                     FPNKKDDLRTAFAEIGAELRSQYLVAYSPTNKNRDGAFRTMTIEISNPGLAKQGLKLR
                     YRPGYFAKRTG"
     gene            1434..1895
                     /locus_tag="VIT19_10640"
     CDS             1434..1895
                     /locus_tag="VIT19_10640"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY5839481.1"
                     /translation="MGSKENLKLIRARYEAVNSHDFEKFQSFYDKSISWGDPHLARAV
                     KGPVAVRRRLESLTAAFPDLKWELGRIFSEGEHVCAEFTFTGTHRGKLDNRGRTISAS
                     NQRIRIPAVGVYTVRGNKIVDSKIYYNFEDLKKQQGTAKAGARKTPRKRKS"
     gene            complement(1911..>2127)
                     /locus_tag="VIT19_10645"
     CDS             complement(1911..>2127)
                     /locus_tag="VIT19_10645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839482.1"
                     /translation="AKGGATVADIALMRRVVGSELGVKASGGVKSMADARAMVEAGAT
                     RIGASVGVKIAQEAAGVKTNGRVPAAY"
BASE COUNT          474 a          582 c          619 g          452 t
ORIGIN      
        1 aacgaagcca tcagcaaacg gcgaaaagcg atacgtcgtc gcgatgtgac gattgagcga
       61 agcggagttg tactgtgtca gcacaaacat tcgaattaca tctgagttga tgcaattcga
      121 aatcggcaca tcgaccagcc ggtacttccc cccgagcggc accgccggtt tcgaacggtc
      181 gcgcgtcagc ggaaacaggc gactgccggc accaccaccc aggatgaccg ccagaagatt
      241 ccgttttgaa ggcatagagt gagccgagga tatagggaaa ggtgcaggcg tttcaagatg
      301 cggctgggtc agcccgtccg cttcgcaaaa tatcccggcc ggtaacggag tttcaagcct
      361 tgtttcgcaa gaccaggatt cgagatctcg attgtcatcg tgcggaaggc gccgtcgcga
      421 ttcttgtttg tcggtgagta cgcgacgaga tactgggaac gaagctcggc cccgatttcc
      481 gcgaacgcgg tgcgcaggtc gtctttcttg ttcggaaaga acgcccggcc gccggtgcgt
      541 tcggccactt cgcgcaacgc gctcttgttt acgccgtcgt atttctggtc gccgatgccg
      601 atcgcgtaga taactgtttc cgtggcgatc gcatgctcta ccgccatcga gcggggaacg
      661 cggctggtgg tgtcgcgacc gtcggtcaag agaatgattg cgcggcgacg ttgctctgga
      721 tcggcggcca gaacgcggcg ggaagtgagc agcactgagt cccagatcgc ggtcgagcct
      781 tcgctcggcg gcccaatcgt gcccgggccg gaagtaatgc cagtcagcgc cggcgcggag
      841 ccgatgtagg aagggaaggc gacttccacg cgttccagca ctcgataaag cgaaatcaca
      901 tcgcgcgtca gcggctgttc gacatgcgcg tagccttcga aaggaataat tgccgcctga
      961 tccttttccg atcgaatcac gttttctatg aacgtacgcg cggctgcctt ttcgtccggc
     1021 agggtccgct cttgcgagat gctgacgtct atcagaaacg cgatcgacag cggccgatca
     1081 gtttcgcgct gaaaggtgaa gactttctgt ggcacgccgt cttccagaac gcgcaggtca
     1141 ctttcctgaa gcgtggtgat gtaccgattg tttttatcag tcgcagtgaa gagaagattt
     1201 gtgagatcgg tttcgacacg gagaacgtcg tcatcctgag ctggtgtcgg agattgggtt
     1261 tttccggtcc agacgattgc aatcaacagc agcgctaccg agatcactcg accgattgct
     1321 ttcgatttgt ccaataaaac actcactgct ttctcggttt agagttagac tgtagcgcga
     1381 tttcgcgtat gcgcaaaaca actcgcacgc ttaaaaaaat ggaaggggaa aaaatgggca
     1441 gcaaagagaa cctcaaacta attagggcgc gctacgaggc cgtcaattcc cacgatttcg
     1501 aaaagtttca gagcttctat gacaaatcga tttcctgggg cgacccgcat ttagcccgcg
     1561 cggtaaaggg acctgttgca gttcgacgtc gcctcgaaag tctgacggct gcttttcccg
     1621 atctcaaatg ggagttgggc cgcattttta gtgaaggcga acacgtttgt gcggagttta
     1681 cgttcacggg cacgcatcgc ggcaagttag acaaccgcgg tcggacgatt agcgcttcca
     1741 atcaaagaat tcgaattccc gcggtgggtg tttacacagt ccgcggaaac aagattgtgg
     1801 attcaaagat ctactacaat tttgaggatc tcaagaaaca gcagggaacg gcgaaggccg
     1861 gggcgcgcaa gacgccacgt aaacgcaaat cgtgaattga tcgatgaggg ctagtaggca
     1921 gcgggaaccc gcccgtttgt cttcacgccg gcggcttcct gcgcaatctt gacacctacg
     1981 ctggcgccga tgcgggtcgc gcctgcttcg accatcgcgc gcgcgtcagc catgctcttt
     2041 acgccgcccg aagccttcac gccaagttct gaaccaacca cccggcgcat caatgcgatg
     2101 tcagccacgg tcgcgccgcc tttcgca
//
LOCUS       DATDBY010000567         3965 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1689750, whole genome shotgun sequence.
ACCESSION   DATDBY010000567 DATDBY010000000
VERSION     DATDBY010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3965)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3965)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3965
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1689750"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1199)
                     /locus_tag="VIT19_10650"
     CDS             complement(<1..1199)
                     /locus_tag="VIT19_10650"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY5839483.1"
                     /translation="MKVDTLPALCLEAITRHNKPNTVTEKRGGKWVRVSSDEFVGRVR
                     HIALGLADLGIQPGDRVGLISENRPEWSIADLAVLSAGAVVVPIYTTQAPDQIRFILE
                     DSGARALLISGGRILKHAREGFEAVDTLKDIVIFDPKSVAGVRGGVALQSVEGRGAEI
                     DGKDPDAFDKLIGRGRPDDLATIIYTSGTTGEPKGVMLTHDNFIANVRSITTGLPISP
                     SDVSLSVLPLSHIFERTVFYVFAYVGVAVHYAASFDQVGEFLREVRPTIMTAVPRLFE
                     KVYHRIIKKGTSAGGAKAKIFEWSLAVGQRVAELEDKKRRVPLSLRAKHAIADRLVFT
                     KWREGIGGRLRYFVSGGAPLSPTLSYSFLGAGIKILQGYGMTETCIVCANRPEDNRVG
                     SIGKPFKG"
     gene            complement(1339..2802)
                     /locus_tag="VIT19_10655"
     CDS             complement(1339..2802)
                     /locus_tag="VIT19_10655"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEY5839484.1"
                     /translation="MQIRKTAPPPVRRRHTLASRLVFVAICTAIVATTLAYGTVHNWA
                     LAMFTFSAIVLILLWAVDGAILRSVLAPVNPLQWPLVGMVLLGLFQLLPLRTHDPAGL
                     PLSPVRSLSLDPYATRLALVQVAGLLIYFAATSIFVDTPRRLKALVRTITIFGFLLAI
                     FGMTQSFTSDGTRVYWYRQLAQSTAFGPFINRHHFAGFMLMAVSIPFALLLSGAVENY
                     KRPLYAFAAVVMVMALVATNSRGATIALGAQIFVLVVTASFGWGKKKEQSRTKRIRAG
                     ALRGVIALAVVIVLIGGALVLSGPEVFTRFLGTPIAEDPTTGRAHFWRVTLDVIKAYP
                     LIGSGLGSFGAIYTRYDTRNGLYRLEQAHNDYLQTLSDAGIAGAILGLAFIFILFRRG
                     FARRETHDRFRRAVTTGAMAGCFGALVHSFFDFPLHTTANALLFVILAAIATQDTRIN
                     TTYLPGRKRKRRSSRRAQTSESPPGEGPASEPATAEL"
     gene            complement(2768..>3965)
                     /locus_tag="VIT19_10660"
     CDS             complement(2768..>3965)
                     /locus_tag="VIT19_10660"
                     /inference="COORDINATES: protein motif:HMM:NF014116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="carbohydrate binding domain-containing protein"
                     /protein_id="HEY5839485.1"
                     /translation="NLELARVAARWAPDDPVVHWQLGAAARREFTENNIQETLREFEI
                     AVRLSPNDFRYWEELGRALEMSDDRAGAEKALRRAISLAPNYYHPHWRLGNLLVRSNR
                     YEEGFKHLFRAAEANQGLWPQAINLAWQAYDGDVDRITTEACQDPNVRILFATYLVGL
                     KHYDDATRLWKTLTPDVRAKLAGPGRNLRKALLDAKQFRAALEVHRDLEPANPHAPEV
                     LSNGGFEELITLPVTKPFGWTIGSNVQAQISIVNEGYGGRRSMQIVLSATNRLDRINA
                     SQTIAVQPNTQYRLEYYARTDRLSSASTPVVIIMDGGDNQTIATTASLPTGTHGWQSY
                     AVDFKTRNSDGITLIIGCLPCSVGDICPIFGTVWYDDFILQRASGGSGRTTAASANQE
                     NRAAAR"
BASE COUNT          855 a         1177 c         1169 g          764 t
ORIGIN      
        1 cctttgaaag gtttgccgat cgagccgacg cggttgtctt cgggccggtt cgcgcaaacg
       61 atgcaggttt cggtcatgcc ataaccctga agaatcttga tgccggcgcc gagaaacgaa
      121 tacgaaagcg tcggtgacag cggcgcgccg cctgagacga agtagcgcag gcgtccgccg
      181 atgccttcac gccatttcgt gaacaccagg cgatcggcga tcgcatgttt cgcgcgcaaa
      241 gagaggggca cgcgccgctt cttgtcttcg agttcggcga cgcgctgacc cacagccagc
      301 gaccattcga aaatctttgc tttcgctcca cccgccgacg tgcccttctt gatgatgcgg
      361 tgatagacct tctcaaacag gcgcggcacc gccgtcatga tcgtggggcg aacttcgcgc
      421 agaaactcgc cgacttgatc gaaagaagcg gcgtaatgca cagccacgcc gacgtaagcg
      481 aagacgtaaa acaccgtgcg ctcaaaaatg tgcgaaagcg gaagaactga gagggaaacg
      541 tcgctggggg agatcggcaa accggtcgtg atcgaacgca cgttggcgat gaagttgtcg
      601 tgcgtaagca tcacgccctt cggctcgccc gtagttccgg acgtgtagat gatcgtcgcg
      661 agatcgtcgg gccgcccacg cccgatcagc ttgtcgaaag cgtccgggtc tttgccatcg
      721 atttcagctc cacggccttc gacagactgg agggcgacgc cgcctctgac gcctgcgact
      781 gacttcggat cgaagatcac gatgtctttc agagtatcca cggcttcgaa tccctcgcgc
      841 gcgtgtttca gaattcgccc gcctgaaatt agaagcgcgc gcgcgcctga gtcttcaagg
      901 atgaagcgaa tttgatcggg agcctgggtc gtgtagatcg gcaccacgac ggcgccggcg
      961 ctgagcaccg cgagatccgc gattgaccac tcaggccgat tctcagaaat caggcccacc
     1021 cgatcgccgg gctgaatgcc taagtccgcg agcccgagcg cgatatgtcg cacgcgcccc
     1081 acaaactcgt ccgaagatac gcgcacccat ttgccgccgc gtttctcggt gacggtattc
     1141 ggcttgttat ggcgcgtgat ggcctcaagg cagagagcag gcagagtatc gactttcact
     1201 tctggtgtct gatttctgac ctctgacttc tggattgtcg ccgctgacat ctgacgtctg
     1261 atctctgact ttcggacttc tgacctctgg tttgtggagg gaaagagcga caaaagacta
     1321 caacgtctat cgtcgaagtt acaattccgc agtagccggc tcgctggccg ggccctcgcc
     1381 gggtggtgat tcagaagtct gggcgcgacg tgacgagcgc cgctttcgtt tgcggcccgg
     1441 cagataggtc gtgttgatgc gcgtgtcctg cgtggcgatc gcggcgagga tcacaaacag
     1501 gagcgcgttg gccgtcgtgt gcagcggaaa atcgaagaag ctgtgtacca gcgctccaaa
     1561 acagcccgcc atcgcgccgg tggtgactgc gcgccggaac cggtcgtggg tctcacggcg
     1621 cgcgaacccg cggcggaaca gaatgaagat aaacgccagc cccagaatcg cgccggcgat
     1681 tcccgcgtca gacaacgtct gcaaataatc gttgtgcgcc tgctcaagac ggtagagacc
     1741 attgcgcgtg tcatagcgcg tgtaaatggc gccgaacgat cccaggcctg aaccgatcaa
     1801 cgggtatgcc ttgatcacgt cgagtgttac tcgccaaaaa tgcgcgcgtc ccgtcgtcgg
     1861 atcttcggcg atcggcgtgc cgaggaaacg cgtgaaaacc tctggaccgc tcagcaccag
     1921 cgcgccgccg attagcacaa tgacgaccgc cagagcgatt acaccacgca gagcccccgc
     1981 acgaattctc tttgtgcgcg actgttcctt tttcttaccc cagccaaaac tcgcggtcac
     2041 gaccaaaaca aagatctgag cgccgagagc gatcgtggcg ccgcgcgaat ttgtcgcgac
     2101 cagggccatc accatcacga cggccgcgaa cgcatacaac gggcgcttat aattctcgac
     2161 tgcgcctgag agcagcagcg cgaaggggat ggagacggcc atcaacataa agccggcgaa
     2221 atgatgacga ttaatgaacg ggccgaaagc ggtgctctgc gcaagttggc gataccagta
     2281 aacgcgcgtg ccgtcgctgg tgaacgactg ggtcatgcca aagatcgcca gtagaaatcc
     2341 gaagatggtg atcgttctga cgagtgcttt caatcgtcgc ggcgtgtcca caaagatcga
     2401 ggtcgcggca aaataaatca acaacccggc gacctgcacc agggccagac gcgtggcata
     2461 aggatcgaga gatagcgagc gtactggcga gagcggcagc cccgccgggt cgtgtgtccg
     2521 caacggcaac agctgaaaca gcccgagcag gaccatccca accaacggcc actgcaacgg
     2581 attaaccggc gccaaaaccg agcgcaaaat ggctccgtca actgcccaaa gcagaattag
     2641 tacgatcgcg ctgaacgtga acatcgccag cgcccagttg tgaaccgtgc cgtaggcgag
     2701 agtcgtcgcc acaatcgccg tgcaaatggc cacgaatacc aaccggctgg cgagcgtgtg
     2761 ccggcgccta acgggcggcg gcgcggtttt cctgatttgc actcgcggcg gtagttcttc
     2821 ccgaaccgcc actggcgcgc tggagaatga agtcgtcata ccatacagtt ccaaaaatcg
     2881 gacagatatc gccgaccgaa caggggagac agccgataat tagcgtgatg ccgtcgctgt
     2941 ttcgagtctt aaaatcaact gcataacttt gccagccgtg cgtgccggtc ggcagtgacg
     3001 ccgtagtcgc aatcgtttga ttgtccccgc cgtccattat gattactacc ggcgtactcg
     3061 cactgctaag tctgtcagtg cgcgcatagt attcgaggcg atactgggtg ttcggctgca
     3121 cggcgatggt ttgcgatgcg tttatccgat caagccggtt ggtcgcgctc aacacaatct
     3181 gcatgctgcg ccggccgccg taaccttcat taacgattga aatttgggcc tgaacattcg
     3241 agccaattgt ccagccgaac ggcttcgtta ccggcagtgt gatcaattcc tcgaagccgc
     3301 cgttcgaaag gacttcaggt gcatgcgggt tggccggttc gagatcgcgg tgtacttcga
     3361 gcgccgcgcg aaactgtttg gcatcgagca gagctttgcg caggtttcgt cccgggccgg
     3421 cgagtttcgc acggacgtcc ggagtcaggg tcttccacaa tcgcgtcgca tcgtcgtaat
     3481 gcttcaagcc cacgaggtac gtcgcaaaaa gtatgcgcac attcggatcc tggcacgctt
     3541 cggtggtgat gcgatcgacg tcgccgtcgt aggcctgcca tgcgaggtta atagcctggg
     3601 gccaaagtcc ctggttcgcc tcagccgcgc gaaaaagatg tttgaaaccc tcttcgtacc
     3661 ggttcgaccg caccagcaag tttcccaatc gccagtgcgg gtggtagtag ttcggagcca
     3721 gcgaaattgc gcgacgcaaa gccttctcag cgcccgcgcg atcgtcactc atttcaagag
     3781 cgcgtccaag ctcttcccag tagcgaaaat catttggtga aaggcgcacc gcgatttcga
     3841 actcgcggag cgtttcctgg atgttgttct cggtaaactc tcgccgcgcc gccgcgccca
     3901 actgccaatg aacgaccgga tcgtccggcg cccaacgcgc ggccacgcgc gccagttcga
     3961 ggttt
//
LOCUS       DATDBY010000568         3804 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1028889, whole genome shotgun sequence.
ACCESSION   DATDBY010000568 DATDBY010000000
VERSION     DATDBY010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3804
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1028889"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1152
                     /locus_tag="VIT19_10665"
     CDS             <1..1152
                     /locus_tag="VIT19_10665"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5839486.1"
                     /translation="HYHLDRARDLFLQLKDVGTAAQVDETRARTLLAEGSLKNAERTI
                     KAAVRVLEKGGQQAVLAEALTTQGIIAARMGNQARSGLLLQRAIVIAETVGDREGSGR
                     AHLTIVEELGSQTGARQLVEIYQSAVELLEHSQDPATHKRLISCARKVINALLVEKPG
                     GGFMPKPDSWEGFSLRREIKKIERNLIERSLRDASGSVTKASQLLGFRHHQSLVSLLN
                     NRHKDLIGHRTAVRKRRRHLFSQPARAKQRTTPMEPEVAPNQLAILHVEDNRPLARRV
                     NERLTNDGYHVQSGSDGLAAWEILKTGARCDVLIVDSNLPGLSGLELILRVRSIVHRR
                     NLPIIMLSGDDVEKEAWRAGVDAFLPKSEAVDKLSGTIGRLVDELEHDN"
     gene            complement(1153..1584)
                     /locus_tag="VIT19_10670"
     CDS             complement(1153..1584)
                     /locus_tag="VIT19_10670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839487.1"
                     /translation="MPRTNWLRMIIGILIATLIMFFGDGFFHERIVVADWTAVYTALG
                     IRPPVHNTANLLYFFIFELGRGILAMSLYVMLRVCWKPGPAAAALAGIVTWIAFSVTG
                     PAQFIPLGFFSHALWLKVGAFHLVTSIIATIAGAAVYKEGK"
     gene            complement(1652..2458)
                     /locus_tag="VIT19_10675"
     CDS             complement(1652..2458)
                     /locus_tag="VIT19_10675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839488.1"
                     /translation="MSYRKVTGALVTILVSVISCLAQSDAAAKTSDDKAEQIVQKAIK
                     ASGGDAYLNVRTVIGRGFYTGYHDGVSGVPLRFVDYLAYPDRERTEFSGEGNRTIQTN
                     YQNEGWMFDAAARSLKDQTAKQVEDFRTAMRTSMENLLRGWWRKEGATLSYVGRREAS
                     LGRRNEAVKLTYPDGFWIEYEFAAVEGTPAKAIYKRKQKHPDTDEMLETTEEDRFFKP
                     VGVAGVSAPFVIDHFRNGVQTSRINYESIEFNKPLADSLFAKPANIKAIK"
     gene            complement(2566..>3804)
                     /locus_tag="VIT19_10680"
     CDS             complement(2566..>3804)
                     /locus_tag="VIT19_10680"
                     /inference="COORDINATES: protein motif:HMM:NF019344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY5839489.1"
                     /translation="SIIETREILLGVRPRLERNYSVQISDEAINTALEMAPKYIRNLH
                     LPDKAIGWLDTAAVKVEINEPHAMIVKPEHVIDVISQESRIPRDMIFRDTSDRFALIE
                     AQLAQRVIGQKDAIKAVAQRLRLNKGPLKESHYKPDGVLLFLGPTGVGKTELAKAVAE
                     FMFGDEQKMIRLDMSEYSEGTIGIEKLIGMPRGIVGSERGGILTEQLRENPYTVLLLD
                     EVEKANPYLMNLFLQAFDEGWLTDGRGRRVYLSDAIVIMTSNLGSDSFKKFEKPLGFG
                     TKTSNDFRQVKKDVMKAAEARFSPEFRNRIDEIVVFSPLTMDEVKQIAQLYLDKTRRQ
                     MKRQGKLFEVTEAAVEHVTEKGFSTQYGARFLKRYIDERVKLPITNMWKESSRFVVDV
                     EDGEIVARAEDGPGVQSNGD"
BASE COUNT          836 a         1063 c         1045 g          860 t
ORIGIN      
        1 cactaccatc tggatcgcgc tcgcgatctg ttcctgcaac tgaaagatgt tggaactgcg
       61 gcacaggttg acgagacgcg cgcgcgtact cttctggccg agggcagtct taagaacgcc
      121 gagcggacga ttaaggcggc agtcagagtc ctcgagaagg gtgggcagca ggcggttctg
      181 gctgaggcgc tcaccaccca gggaattatc gcggcccgca tgggcaacca ggcgcgctct
      241 gggttactgc tacaacgcgc gatcgttatc gcggaaacag tcggcgatcg cgaaggctcc
      301 ggtcgcgcgc acctgacgat cgtcgaagag ctcggcagtc aaacgggagc caggcaactc
      361 gtagaaatct accagtccgc cgttgagttg ctggaacatt ctcaggatcc ggcaacgcac
      421 aagcgtctga tttcctgcgc gcgaaaagtg attaacgcat tactggtgga gaaaccgggc
      481 ggaggtttta tgccgaagcc cgattcatgg gagggatttt ccctgcgccg ggaaatcaag
      541 aagatcgaaa gaaacctgat cgaacgctcg cttcgcgatg catctggttc tgtgacgaaa
      601 gcctcgcaat tgctgggctt caggcatcac cagagtctcg tgtccctgct caacaaccgg
      661 cataaagatc tgattgggca ccgcacggca gtgcggaagc ggcgacgtca tttgttttcg
      721 cagcccgcgc gagctaaaca aagaaccaca ccaatggagc ccgaggtcgc tccgaatcaa
      781 ctcgcgatcc tgcacgtcga agacaacaga cccctggcgc gacgcgtaaa cgagaggctt
      841 actaacgatg gataccacgt ccaatcgggc tctgatggtc tggccgcctg ggaaatctta
      901 aagaccggtg cgcgttgcga tgtgctgatt gtcgatagca atttgccggg gttgagcggg
      961 cttgagctaa tcctgcgcgt ccgaagcatc gtccatcgcc gcaatctgcc aatcatcatg
     1021 ctctctggtg atgatgttga gaaagaagcc tggcgtgccg gcgttgacgc ttttctgccc
     1081 aagagcgaag ccgtcgataa actgtcagga actattggca ggctcgtcga cgaacttgag
     1141 cacgacaact gatcacttac cctctttata aaccgcggcg cccgcgatcg ttgcaatgat
     1201 ggacgtgacc aggtgaaaag caccgacctt gagccaaagc gcatgcgaaa agaacccgag
     1261 cggaatgaac tgcgccgggc cggtaactga gaaagcaatc cacgtgacga tgcccgccag
     1321 cgccgcggcc gccggaccgg gtttccagca cactcgcaac atcacgtaga gcgacatcgc
     1381 caaaattccg cgtcccagct caaagatgaa gaagtacaaa aggttagccg tgttatgtac
     1441 cggcgggcga atgccgagcg cggtataaac cgctgtccag tcggcgacca cgattcgctc
     1501 gtgaaagaac ccgtcgccga aaaacatgat gagcgtggcg atcagaatgc cgatgatcat
     1561 ccgaagccaa ttcgttcggg gcattggtag tctccttttt tctggtttac gctacccact
     1621 ggacgagcag cgcgggtgag attacaaact gctatttgat tgccttgatg ttcgcaggct
     1681 ttgcgaacaa tgaatcagcc agtggcttgt tgaattcgat ggactcgtaa ttgatgcgac
     1741 tggtttgcac gccgttacga aaatgatcga tcacgaacgg cgcgctcacg ccggcgaccc
     1801 cgactggttt aaaaaaccga tcctcctcgg ttgtttcgag catttcgtcg gtgtcaggat
     1861 gtttttgttt gcgcttgtaa atggctttcg cgggcgtgcc ttcaacggca gcaaactcgt
     1921 attcgatcca gaagccatcc ggataagtca gcttcaccgc ttcgttacgg cgacccagac
     1981 tggcttcgcg gcggccgacg taacttaacg tcgcgccttc tttccgccac cagccgcgca
     2041 aaagattctc catgcttgta cgcatggcgg tgcgaaagtc ctcgacctgt ttcgcggtct
     2101 ggtctttcaa ggacctcgcg gccgcatcga acatccatcc ttcgttctga taatttgtct
     2161 gaatagttcg gttaccttca ccgctgaatt cggtgcgctc gcgatcggga tacgcgaggt
     2221 agtcgacgaa gcgcagcggc acacccgaaa ctccatcgtg gtagccggtg tagaagcctc
     2281 ggccgatgac cgtcctgaca ttcaagtagg cgtcgccgcc gctggcttta atagctttct
     2341 gaacaatctg ttcggctttg tcgtcgcttg tcttagccgc cgcgtcggat tgcgccagac
     2401 acgaaatgac ggaaacgagt attgtcacta gtgcgcctgt aacttttcgg taggacatga
     2461 agtgtgaagt tggccccatc ggtctggttg ggggattaca gcacaaaatg aaaagagcct
     2521 caacgccaag gttgaggctc tcttttgttt ccgcttcagg aaggcctagt cgccatttga
     2581 ttgaacgccc gggccgtctt ctgcgcgcgc gactatttca ccgtcctcga catcgaccac
     2641 gaagcgcgac gactccttcc acatgtttgt aatcggcagc ttaacgcgtt cgtcgatgta
     2701 gcgcttcagg aaccgagcgc cgtattgcgt gctgaagcct ttttccgtga cgtgctcgac
     2761 cgccgcttcc gtgacttcga atagcttgcc ctgccgtttc atctgacggc gcgtcttatc
     2821 gagataaagt tgcgcgattt gcttcacttc gtccatcgtc agcggcgaga agacaacaat
     2881 ctcgtcgatg cgattgcgga actcaggcga gaagcgggcc tcggcagctt tcatcacatc
     2941 tttcttaacc tgacgaaagt cgttgctggt cttggtgcca aagccgagtg gtttctcgaa
     3001 tttcttgaaa ctgtccgagc cgaggttcga cgtcataatg acgatggcgt cagataaata
     3061 aacgcgccga ccacgaccat ccgtcagcca gccttcgtcg aaggcttgca ggaacagatt
     3121 catcaggtac ggattggctt tttcgacttc gtcgagcagc agcaccgtgt agggattctc
     3181 gcgcaattgc tcagtcagaa ttccaccgcg ttctgaaccc acaatgccac gtggcatgcc
     3241 gatcagtttc tcgatgccga tggtgccctc actgtattcc gacatgtcca ggcgaatcat
     3301 cttctgctca tcaccgaaca tgaattcggc gacggccttg gccaattccg tcttaccgac
     3361 accggtggga ccgaggaaca gcaagacgcc gtcgggtttg taatgcgatt ctttcagcgg
     3421 tcctttattc aaacgcagac gttgcgcgac agctttgatg gcgtcctttt gtccgatgac
     3481 tcgctgcgcc agttgcgctt cgatcaacgc gaaccgatcg ctggtgtcgc gaaaaatcat
     3541 gtcgcgcgga attcgtgact cctgcgaaat cacgtcgatc acatgctcag gcttcacgat
     3601 cattgcatgt ggttcattga tttcaacttt aaccgcagca gtgtccagcc agccgatcgc
     3661 tttgtccggc agatgcagat ttcggatgta cttcggcgcc atttcgagcg ccgtgttaat
     3721 cgcttcgtcg gaaatctgaa ccgagtagtt tctttccaga cgaggccgga cgccgagcag
     3781 aatttcgcgc gtctcgataa tcga
//
LOCUS       DATDBY010000569         2208 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2919267, whole genome shotgun sequence.
ACCESSION   DATDBY010000569 DATDBY010000000
VERSION     DATDBY010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2919267"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..551)
                     /locus_tag="VIT19_10685"
     CDS             complement(<1..551)
                     /locus_tag="VIT19_10685"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEY5839490.1"
                     /translation="MVQAINLLARLRRQHALLLTCSCALLLLINFSPSTAFLPAFNWS
                     HNPNSNEDEIDSALQQSAEDALGNRQGSIIVMDAQTGRVRAAVNPEGAYGQAMMPGSS
                     IKPFTTLAAMRAGLIEEDSRTVCPGRFTGLSFSLPCVHANHLPPFNPSQAIAHSCNYY
                     FATLGQRLGPDKLTQTLRQFGFG"
     gene            complement(551..1387)
                     /locus_tag="VIT19_10690"
     CDS             complement(551..1387)
                     /locus_tag="VIT19_10690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839491.1"
                     /translation="MITNLKLWFESLRSTLTNLRALGIFIALYALLLASFYFFISTRE
                     ATVWQVLVTYALLLLVPAQFFVLQAAILEFARARKLVVKNILLSALKLAAVTIPVLII
                     GALLWWLMNKLQARFPAPPAPLVFPPAPPKAPPAHWPTLLITTLRFVLFGIALPLATI
                     HLWIEASVCDVRASFAGGARNVFGTMGRALARAFSSESVFVYGLGLILFVLGPYLILQ
                     PRLTFTGTKTAFTLFVVQVIVALVLMLIGWVVTLVTLARAHASEEAIEVQAPAMVAES
                     PA"
     gene            complement(1377..1817)
                     /locus_tag="VIT19_10695"
     CDS             complement(1377..1817)
                     /locus_tag="VIT19_10695"
                     /inference="COORDINATES: protein motif:HMM:NF024759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEY5839492.1"
                     /translation="MKTPSIATINRFSHEVIGAAIEVHRELGPGLLESAYRECLAREF
                     TLREIPFEREKPIRLEYKGIVLEAGYRLDFLVAECLVVELKAIEALAPVHDAQLITYL
                     RLGGWRLGLLINFNVAVLKSGIRRRILGYETEQAMVPGEAHHDH"
     gene            complement(1970..>2208)
                     /locus_tag="VIT19_10700"
     CDS             complement(1970..>2208)
                     /locus_tag="VIT19_10700"
                     /inference="COORDINATES: protein motif:HMM:NF036531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839493.1"
                     /translation="NLNHSTGQWSDWYSNREFRDNRTVIFMNYFDGDATLQYAMRVEV
                     PGEFKVAPARAELMYQPTVQANTANDRLRILDKK"
BASE COUNT          529 a          596 c          632 g          451 t
ORIGIN      
        1 tgtccaaaac cgaattgacg aagtgtttgg gtcaacttgt ccgggccgag ccgttgcccg
       61 agcgtcgcga agtagtaatt gcatgagtgg gcgatagctt gtgaaggatt gaacggcggc
      121 aggtgattgg catgcacgca cgggagagaa aaactgagac cggtgaagcg gcccggacaa
      181 accgtgcgcg agtcttcttc gatcagtccc gcgcgcatgg ccgccagcgt ggtgaacggc
      241 ttgattgaag aaccgggcat catcgcctgc ccgtacgcgc cttccggatt taccgccgcg
      301 cgcacgcgtc cggtttgcgc gtccatcacg atgatcgaac cctggcgatt tcccaatgcg
      361 tcttcggcag attgctgaag ggccgaatcg atttcgtctt cgtttgagtt tgggttgtga
      421 gaccagttga acgccggcag aaacgccgtt gacggcgaga aattgatcag cagcaggagc
      481 gcgcacgagc acgttaacag cagtgcatgt tggcgtctca gccgcgctaa cagattgatt
      541 gcctggacca ttaggcgggt gactcagcga ccatggccgg cgcctgaacc tcaatggctt
      601 cttcgctggc gtgcgcgcgc gcgagcgtga cgagcgtcac cacccagcca atcagcatca
      661 acaccaaagc gacgatcacc tgtacgacga aaagcgtgaa ggctgtcttc gtgcccgtaa
      721 aggtcagacg cggctgaaga atcaagtaag gacccagaac gaatagaatc agtccgagcc
      781 cgtaaacgaa aactgattcc gagctgaatg cgcgagccag cgctcggccc atggtgccga
      841 agacgttccg ggcgccgccg gcgaaagaag cgcgcacatc acacacggat gcttcaatcc
      901 aaaggtgaat cgttgccagc ggaagcgcga tgccgaacag aacgaagcga agcgttgtaa
      961 tcagcagcgt cggccaatga gccggcggcg cctttggtgg tgccggcgga aaaacaagcg
     1021 gcgcgggcgg agcagggaag cgcgcttgca gtttgttcat cagccaccac agcaaggcgc
     1081 cgatgatgag cactggaatc gtgacggctg ccaatttgag cgcgcttaaa agaatgttct
     1141 tcacgacgag ctttcgcgcg cgcgcgaact caagaatcgc tgcttgaagc acaaaaaact
     1201 gcgccggcac gagcagtagc aaagcgtaag tcaccagcac ctgccagacg gtcgcctcac
     1261 gcgtcgagat aaagaaatag aagctggcga gcagcagcgc gtagagagcg atgaatatcc
     1321 cgagtgcgcg caaattcgtg agcgtgctcc gtaggctctc gaaccaaagt ttcaaattag
     1381 tgatcatgat gagcttcccc aggcaccatc gcctgttctg tttcgtagcc tagaatcctt
     1441 cttcgaattc cgcttttcag gactgcgaca ttgaagttaa tgagtaggcc caggcgccac
     1501 ccaccgagtc gcagataggt tatcaactgc gcatcatgaa ccggtgccag ggcttcaatt
     1561 gcttttagtt caactacgag acactctgct accaaaaaat ccaaacgata accggcttcg
     1621 agaacgatgc ccttgtattc aagtcttatc ggcttctctc gttcaaatgg aatttcacgc
     1681 aaggtgaatt cgcgggctag gcattcacga taagccgatt ccagcaggcc aggccccaac
     1741 tctcgatgga cttcgatagc ggcaccaata acctcatggg agaatctgtt tatggtcgca
     1801 atcgaagggg tcttcatatc tgagagggtc cttgaatacg tttctttacc acagagacac
     1861 gaaggtttca cgaaggagca cagagaaaaa ctctgtggag ctctgtgtga tcttcgtgtc
     1921 tctgtggtgg tcatttgcat gaagaaaaga tcgcttgaga agaactgagc tatttcttgt
     1981 ccagaatcct caaccgatcg ttcgccgtat tcgcctgcac agtcggctgg tacatcagct
     2041 cggcgcgtgc cggcgcgacc ttgaattcgc ccggcacttc gacacgcatc gcgtattgca
     2101 gcgtcgcgtc gccgtcgaag tagttcatga aaattaccgt gcggttgtcg cggaactcac
     2161 ggttgctgta ccagtcgctc cactggccgg tggagtggtt caggttaa
//
LOCUS       DATDBY010000570         3521 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2089544, whole genome shotgun sequence.
ACCESSION   DATDBY010000570 DATDBY010000000
VERSION     DATDBY010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3521
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2089544"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..225
                     /locus_tag="VIT19_10705"
     CDS             <1..225
                     /locus_tag="VIT19_10705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839494.1"
                     /translation="FLRNVGFKGYGILDKHIVRCLSELGVIDSPKPPTTRNRYLEAEQ
                     RMKSFADEVGINFDELDLVLWSMRTGKVLK"
     gene            231..1856
                     /locus_tag="VIT19_10710"
     CDS             231..1856
                     /locus_tag="VIT19_10710"
                     /inference="COORDINATES: protein motif:HMM:NF025341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl protease family protein"
                     /protein_id="HEY5839495.1"
                     /translation="MELTAPPPKTLSHSLVRRFVLLLLFLILAAPAFADNKKDREKAQ
                     KSLRSGDFERAEQLYRDILKKDDRDAEARLGLSKALLKQRRLQDSFDHAARVIAVDPL
                     SARAHSLLGAAILASGDFRLSVEEFRTALTLNADEAIAIAGLAMVDFYENRTADALVK
                     LRRAASIDAGEPDYVFSLGQAAARSERYREAADAYERFLMIAPRTDADRRARIRGLID
                     FLRYIGQQNSLYNVSGERAEVPFEAFDNRPILKIRINGSKSPLRFVLDTGSGMSVLSE
                     ETARKLGIKSIARGGLARAVGGGGRFEIVYGFIDSMDIGDVRVENVPVYIRHFHDMQT
                     PVDGYLGIAALGRLVTAVDYGSRRMTLVKPRSALNLDTAVGGLRWRDVTPGITRPGID
                     VPVRTTASGFLSGEVTIEGIKKPLNFIIDTGATVSVLSERAAQLDDAVAFIQEDRMRV
                     FGAAGVAENVKIALLPKVVLGPYTREKISAAVLDLEPINETAGFQQSGILGGNFLRHF
                     RVIFDFRRAIVRFEPLDAPRPAGEPLPQEASGP"
     gene            1853..2332
                     /locus_tag="VIT19_10715"
     CDS             1853..2332
                     /locus_tag="VIT19_10715"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEY5839496.1"
                     /translation="MKPSAYLETSIIGAYLDNGEPFRRDLTIRWWEHELSQYRAVISQ
                     IVVRELERTEEPHRAAYLKLIRGLEQVELTEECAILAEGYVSRGIFHRKYIADALHVA
                     VASFHKIDYLVTWNFGHLANVRRQARIRLFNTAAGFFVPMIVTPEFLVSEATERKTA"
     gene            2397..2618
                     /locus_tag="VIT19_10720"
     CDS             2397..2618
                     /locus_tag="VIT19_10720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839497.1"
                     /translation="MYRRPKFLTVLIRIRETMSREADYDVDLFTEMVRSGVQPQHGSV
                     RNIRGFRKRAPRDEAHDNETLPTPKRAAR"
     gene            2621..3409
                     /locus_tag="VIT19_10725"
     CDS             2621..3409
                     /locus_tag="VIT19_10725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839498.1"
                     /translation="MDATFETIGLEVPTEKAINFLAERAENQGEASQLSRRGGVLHGR
                     CWKLGEGLEVWTVLYESGTGDVFYANCRPGFRARYSQRIAPWALTEYDEAGEAVIHGY
                     CDGTETEVLFELQNLTEVGGSGFRAPELHVGLCGLAYRARVCSREMDPRWLPLERAAP
                     SRAAHENDWILRGRVIAFKPLINPLSGTELYWIYVHLDRLKLEVLVNARALTGGTLAV
                     GATLSAEVWLQGHVLDSRAMRRHYEGVDQAYATADLWSHFSRRN"
BASE COUNT          705 a         1013 c         1027 g          776 t
ORIGIN      
        1 tttttacgta atgttggctt caaaggttac gggattctgg acaagcacat tgtgcgctgc
       61 ctgtcagagc tgggcgtcat cgattcgccg aagccgccta cgacccgtaa tcgctatctt
      121 gaagccgagc agcggatgaa aagtttcgct gacgaagtcg gcatcaactt tgacgagtta
      181 gatctggtac tctggtcaat gagaacggga aaagttctga agtaaccatc atggaactaa
      241 ccgcaccccc ccccaaaact ctatctcatt cgctcgttcg tcgtttcgtc ctactgctgc
      301 tcttcttaat ccttgccgct cccgcattcg cggacaacaa gaaagatcgc gaaaaggccc
      361 agaaatcttt gcgctccgga gatttcgagc gcgctgagca gctctaccgg gacatcctca
      421 agaaagacga tcgcgacgct gaggcacggc tcgggctgag caaggctttg ctcaagcaac
      481 gtcgcttgca ggattcattt gatcacgcgg cgcgcgtgat tgccgtcgat ccactgtcag
      541 cgcgcgcgca ttcgcttttg ggcgcggcga ttttagcttc gggagatttt cgactttcgg
      601 tcgaagagtt tcgaaccgct ctgaccctca atgctgacga ggcgatcgcc atcgccggat
      661 tggcaatggt tgatttctac gagaatcgga cggctgatgc gctggtgaaa cttcggcgcg
      721 ccgccagtat cgacgcgggc gaaccggatt atgttttcag tttaggccag gcggccgcgc
      781 gctccgaacg gtaccgggaa gctgccgacg cgtacgagcg ctttctgatg atcgcgcccc
      841 gcactgacgc tgaccgtcgc gcgcggattc gcgggttgat cgactttctg cgttacattg
      901 gacagcaaaa ctcgctctat aacgtcagcg gtgaacgcgc ggaggtgccc ttcgaagcct
      961 tcgacaaccg gccgatcctc aaaattcgaa tcaatggatc gaagagtccg ctccgattcg
     1021 tactggatac gggctcaggg atgtccgtcc tttccgaaga gaccgcacgc aagctcggta
     1081 tcaagtcgat tgcgcgcggc gggttggcgc gcgccgtggg cggcggcgga cgttttgaaa
     1141 tcgtgtacgg cttcatcgac tcaatggata ttggcgacgt tcgggtcgaa aacgttccgg
     1201 tctatattcg ccactttcac gacatgcaaa cgccggttga cggctacctc ggaattgcag
     1261 cgttgggccg cctggtgact gccgtcgatt acggaagccg caggatgaca ttggtgaagc
     1321 cgcggagtgc tctgaacctg gacaccgcag ttggcgggct gcgctggcga gacgtcacac
     1381 caggcatcac ccgtcccggc atcgacgttc ccgtacgcac gacggccagc ggctttctca
     1441 gcggcgaggt cacaattgaa ggaatcaaga agccactgaa tttcatcatc gataccggcg
     1501 ccaccgtgag cgtgctttcc gagcgggccg cccaactcga cgacgcggtt gctttcattc
     1561 aggaggatcg aatgcgcgtt ttcggcgcgg ctggtgtggc cgaaaacgtg aagattgcgc
     1621 tgctgccaaa ggtagtcctg ggcccttaca cgcgcgaaaa gatcagtgcc gcggtgctcg
     1681 acctcgagcc gatcaacgaa acggcggggt ttcagcaaag tggcatcctg ggcggaaatt
     1741 tccttcggca ctttcgcgtg atcttcgatt ttcggcgcgc catcgtgcgc tttgagccgc
     1801 tcgatgcacc ccggcctgcc ggtgagcctc tgccacagga agcaagcggc ccatgaaacc
     1861 gagcgcgtat cttgaaacat ccatcatcgg agcttacctc gacaacggcg agccatttcg
     1921 tcgcgacctg acgattcgtt ggtgggaaca tgagctgtcg cagtatcgtg cggtgatctc
     1981 gcagatcgtc gtgcgcgagc ttgagcgcac cgaagagccg catcgcgccg catatctgaa
     2041 attgattcgc ggtctcgagc aggttgaact gacggaagag tgcgcgattc tggccgaggg
     2101 ttacgtgtcg cgtgggatct ttcatcgcaa gtacatcgcc gatgctttgc acgtcgcagt
     2161 tgcttcgttt cacaaaatcg actatctagt tacatggaac ttcggccatc ttgcgaacgt
     2221 gcggcggcaa gcacgcattc gattgttcaa taccgccgcc ggattttttg ttcccatgat
     2281 cgtgacgccg gagtttttgg tttctgaagc tacggaaaga aagacggcct agatcgagtt
     2341 cgggtttagg ttttgattct gatctctgac ttctgaattc tgactgctga gttttcatgt
     2401 accgacgacc caaattctta accgtcctga ttcgcattcg cgagaccatg tcgcgcgaag
     2461 ctgattacga cgtcgatctg tttaccgaaa tggtccgctc cggagtgcag ccacagcatg
     2521 gaagcgtgcg caacattcgc ggcttccgga agcgtgcgcc gcgcgacgaa gctcacgaca
     2581 acgaaactct gcccacgccg aaacgggctg cgcgatgacg atggacgcca ctttcgaaac
     2641 catcgggctg gaagtaccga ctgagaaggc catcaacttt ctcgccgaac gcgccgaaaa
     2701 ccaaggcgag gcgagccagc tctcgcgacg cggcggagtg cttcatggcc gctgctggaa
     2761 gctcggcgaa ggtctcgaag tctggacggt gctatatgaa tcaggcaccg gcgatgtttt
     2821 ttacgcgaac tgccggcctg gatttcgcgc gcgctactca caaaggattg cgccctgggc
     2881 tttgaccgag tacgacgaag ccggcgaggc agtgatccac ggctactgcg acggcaccga
     2941 gaccgaagtc cttttcgaat tgcaaaacct taccgaagtc ggcgggtcag gatttcgcgc
     3001 gccggagttg catgtcggcc tgtgcggcct ggcgtatcgc gcgcgcgtct gttcgcgcga
     3061 gatggatccg cgctggctgc cgcttgagcg tgccgctcct tcacgcgccg cgcacgagaa
     3121 cgattggatc cttcgcggcc gcgtcatcgc gttcaagccg ctcatcaatc ctctttcggg
     3181 caccgaactt tactggatct acgttcatct cgatcgactg aaactcgaag tgctggtgaa
     3241 cgcgcgtgct ctgaccggtg gcacattggc agttggcgcg acgctctcgg ccgaagtctg
     3301 gttgcaggga cacgtgctgg attcgcgcgc gatgcgaagg cactacgaag gtgtcgatca
     3361 ggcgtatgcc actgccgatc tctggtcaca tttctcgcgg cgcaactagc ttgagtctca
     3421 ccacccggat tcaatgaagc gcgtcgtcat cattctcctc gccctacttc tgctggccgg
     3481 cgctgcttac cttttcgacc agtactggat tcatcgatac g
//
LOCUS       DATDBY010000571         2917 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2099608, whole genome shotgun sequence.
ACCESSION   DATDBY010000571 DATDBY010000000
VERSION     DATDBY010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2917
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2099608"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1427)
                     /locus_tag="VIT19_10730"
     CDS             complement(<1..1427)
                     /locus_tag="VIT19_10730"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HEY5839499.1"
                     /translation="MNSIHVPTQLRRHRIALFLLISLAFALAAYRVEYVVAQTQTDCP
                     VRITLLQVNDVYQFAPVDGGARGGLARVATLRKKILAESPHTLFLMAGDTISPSIESN
                     TYKGAQMIEAWNAAGLDYATLGNHEFDFGPEVLLQRMGESKFKWLAANVLDKKTGKLF
                     GDTPEFIVREFDGVKIGMFGILLPETISTSRPGPNVEILDPCATAGRVIPKIRAAGAQ
                     VIVALTHLSMAEDKQLARCSGVDVIIGGHEHTLLESMAGGAPIFKMTADAREMGRIDL
                     NIDKKTGKLESIDWKVIPVTNEYEDDPGFAALNEKYGPLLKSLEQPVGRTDVALDMKS
                     ENVRTRETNMGNFIADAYRQATGADVAIVNGGSIRADALIQPGVLTKRDVLSILPFNN
                     KVVKIELTGATLRAALEHGVGSIGVEAQPGRFPQVSGIRFTYDATRKPGERITNVTVN
                     GRLLLDRQKYTLAATNYVIKDGGDG"
     gene            1670..2746
                     /locus_tag="VIT19_10735"
     CDS             1670..2746
                     /locus_tag="VIT19_10735"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY5839500.1"
                     /translation="MFAGETVFITGFPGFIAGRLVERLARGGTRFTLLVQPALLKRAY
                     EDVAQIVAETGAPAENFSIVEGDITKPDLGLTQTDLERARAETHTVFHLAAAYDLAVA
                     REVGQLVNVQGTQNVNEFAKSITNLRRYHYVSTCYVAGRRSGLIREDELEHAAGFRNH
                     YEGSKYLAELSVAALKSELPVTIHRPAVVVGDSRTGETAKYDGIYYLIHYLRKWPGGL
                     TLLNIGNSKVSLNLVPIDYVIEVMVALAKDERAIGTTVQIADPTPLTTEQLFDEIAKT
                     VGGRESWVTIPRRIVYPTLMAPGAPKITGLPHSAVPYFFLEQTYDTSRVRELLEPHGI
                     RCPSFSSYVGALVRFVEEQPALRS"
     gene            complement(2735..>2917)
                     /locus_tag="VIT19_10740"
     CDS             complement(2735..>2917)
                     /locus_tag="VIT19_10740"
                     /inference="COORDINATES: protein motif:HMM:NF022060.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate oxidase C-terminal
                     domain-containing protein"
                     /protein_id="HEY5839501.1"
                     /translation="QFEEFNQKFADNVPRPPHWGGYRLRPDVIEFWQGRENRLHDRLR
                     YTRQKDGGWLIERLAP"
BASE COUNT          605 a          814 c          848 g          650 t
ORIGIN      
        1 tagccgtcgc cgccatcctt aatcacataa ttcgtcgccg ccaaagtgta cttctgtcga
       61 tcgagcagca ggcggccatt cacggtcacg tttgtgatgc gttctcccgg tttgcgtgtg
      121 gcgtcgtatg tgaagcgaat gccggacacc tggggaaagc ggccgggctg ggcttcgacg
      181 ccgattgatc ccacgccgtg ttccagtgcc gctcgcaggg tggctccggt caactcgatc
      241 ttcacgactt tgttgttgaa cggcagaatc gaaagcacgt cgcgcttggt taaaactccc
      301 ggctggatca gcgcgtcggc gcgaatcgat ccgccgttga cgatcgctac gtcagcgccg
      361 gtggcctgcc ggtaagcgtc cgcgatgaag ttgcccatgt tcgtctcgcg ggtgcggaca
      421 ttctcgcttt tcatgtccag cgcgacgtcc gtgcggccaa ccggttgctc caaactcttc
      481 agaagggggc cgtacttttc gttgagcgcg gcgaagcccg gatcatcttc atactcgttg
      541 gtgaccggga tgactttcca gtcgatactc tcgagctttc ccgtcttctt atcgatattg
      601 agatcgatgc gacccatctc gcgcgcgtcg gccgtcattt tgaagatggg cgcgccgccg
      661 gccatcgact cgagtaaagt gtgttcgtgt ccgccgatga tcacatcgac gcctgaacag
      721 cgagcgagtt gcttgtcttc agccatggaa agatgcgtca gcgcgacgat gacctgtgcg
      781 cccgccgcgc gaatcttggg aatgactcgc ccagccgtcg cgcacggatc gaggatctca
      841 acattcggac cggggcgaga ggttgaaata gtctcaggta acagaattcc gaacattcca
      901 attttcacgc cgtcgaattc acgcacgata aactcaggtg tgtcgccaaa aagctttccg
      961 gtttttttgt cgagcacatt tgccgccagc catttgaatt tcgattcccc catccgctga
     1021 agcaggacct ccgggccgaa atcaaactcg tgattcccga gcgtggcgta atccaaaccc
     1081 gccgcgttcc acgcttcaat catctgcgcg cctttgtagg tgttcgattc gatcgacggt
     1141 gaaatcgtgt cgccggccat caggaacaaa gtgtgcggcg actcagccag aattttcttt
     1201 cgcaacgttg ccacgcgcgc caggccaccc cgggcgccgc catcgacggg cgcgaactga
     1261 tagacatcgt tgacttgcaa aagcgtgatg cggaccggac agtctgtttg tgtctgcgcg
     1321 acaacgtatt caacacgata agctgcgagg gcgaatgcaa gcgagatcaa taagaagagc
     1381 gcgattctgt gcctgcgaag ctgggtggga acgtggattg agttcatcgg tcgagccttc
     1441 cgtgaatcga gttgattgaa acgcgttgga ttatacttgc cggtctgagt aattgcagtt
     1501 gggaagggtg gcttgccccc gcaatttcgt tgaccgggct ttcttgcaac gggaacctct
     1561 ctacctgctt aactgagagc gttttaggtg aggcggtggc aagccatttt cccaactgca
     1621 attaatcgga gagacacctc gctgaagcga ggtgtgaatg agattcccaa tgtttgctgg
     1681 cgaaacagtt ttcatcacgg gctttcccgg tttcatcgcg ggacgtttgg ttgagcgcct
     1741 ggcccgcgga gggacgcggt tcactttgct ggtgcagccg gccctgctga agcgtgctta
     1801 cgaggacgtc gcgcagatcg tcgccgaaac gggagcgccg gctgagaatt tttcaatcgt
     1861 cgaaggtgac ataacgaaac cggacttggg tctgacgcag acggatttgg aacgcgcccg
     1921 cgcggaaact cacactgtgt ttcacctggc ggcggcttac gatttggcag tcgcccgtga
     1981 agtgggacaa ctcgtcaacg ttcagggcac gcaaaacgtg aacgagttcg cgaaatcgat
     2041 tacaaacctg cggcgctatc actatgtctc gacctgctac gtcgccggcc gccgctcggg
     2101 gttgattcgg gaagacgaac ttgagcacgc ggcaggcttt cgcaatcact atgaaggatc
     2161 aaagtacctg gccgagcttt ccgttgccgc gttgaaatcg gaattgcccg tcacgattca
     2221 ccggccggca gtcgtcgtcg gcgattcgcg caccggtgag actgcgaagt acgacggcat
     2281 ttattacctg attcattacc tgcgcaaatg gccaggcgga ttgacgctgc tgaacatcgg
     2341 caacagcaaa gtgagtctga acctggtgcc catcgattat gtaattgaag tgatggtggc
     2401 gctcgcaaaa gatgaacgcg caatcgggac gaccgtgcaa atcgccgatc ccacaccgct
     2461 caccactgaa caactatttg acgagattgc caaaacggtc ggcggacgcg aatcgtgggt
     2521 gacgattccg cggcgcatcg tctatcccac gctgatggcg ccgggcgcgc cgaagatcac
     2581 cggcctgccc cattcagccg tgccgtactt ctttctcgaa cagacatacg acacgagtcg
     2641 agtgagagag ttgctcgagc cgcacggaat tagatgtccg tcattttcga gttacgtggg
     2701 tgcgttagtg agatttgtag aggagcagcc ggcgctacgg agctagccgc tcaatgagcc
     2761 aaccgccatc cttctgacgc gtgtatcgca gccgatcgtg caggcgattt tcgcggcctt
     2821 gccagaattc aatgacgtca ggtctgaggc gatagccacc ccaatgcggc ggacgcggga
     2881 cgttgtcggc aaacttctga ttaaattctt cgaactg
//
LOCUS       DATDBY010000572         2228 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2117399, whole genome shotgun sequence.
ACCESSION   DATDBY010000572 DATDBY010000000
VERSION     DATDBY010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2117399"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..840)
                     /locus_tag="VIT19_10745"
     CDS             complement(<1..840)
                     /locus_tag="VIT19_10745"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839502.1"
                     /translation="MTESAIAPAGRFKLRTSALRAYTMLLALIVIWLFFQWATISETH
                     PYGLFLGAINFSKLLQQTAVTGVLAVGMLMVIVSGNIDLSVGALVGLAGGMAAMTQDW
                     GLLPCLAAAIVVGLLIGALQGALVAYINIPAFIVTLGGLQAWRGLILKSTQGATIPVE
                     LPVFRSLGRDFIDPRIGFVLAAIGIATIVWTNLRRTRARRRHGLQALSVAAMATRIII
                     PSVAVVAFVFLMNKAGGIPIPVIFLLAVALAGAFLTTNTTFGRYLYAIGGNPDAARLS
                     GINL"
     gene            complement(975..>2228)
                     /locus_tag="VIT19_10750"
     CDS             complement(975..>2228)
                     /locus_tag="VIT19_10750"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY5839503.1"
                     /translation="LVRDLSVAENIFLGRAPRRFGVINWEELYSRVQKLLDELHLALD
                     PRTPVINLGIGTQQLVEIAKALSQDARILILDEPTAALTDTEVETLFGILKRLRARGV
                     AMIYISHKLEEVFRISDRVTVLRDGKTIETNATSNLNEPRVIAQMVGRAVDQIFPEAK
                     HERGEVVFEVRNVTVEDPSVPGKQLVNSVSFGVRKGEVLGIAGLMGSGRSELLMAIFG
                     AHAGRKSADVFVQGKRAQINSPCDAIERGIGFVTEDRKRYGLVLDQTILKNMTLAGLD
                     RLSGRFFTDEDAEAAAAERAAGELRIKASSIFTIAGTLSGGNQQKVVLAKWLLTNPRV
                     LFLDEPTRGIDVGAKQEIYAQINRLAESGLAIVLVSSELPEVLGLSDRIIVLHEGRVT
                     GEFTRKEATPEAVMSCATGHARLAA"
BASE COUNT          498 a          653 c          615 g          462 t
ORIGIN      
        1 caaattgatt cccgaaagcc gcgcggcgtc agggttgccg ccaatcgcgt acaagtaacg
       61 gccgaatgtc gtgttggtgg tgagaaatgc tccggcgagc gcgacggcga ggaggaagat
      121 caccggaatc ggaatgccgc ctgctttgtt catcagaaag acgaaggcga cgactgcgac
      181 tgagggaata atgatccgtg tcgccatcgc ggccacgctc agcgcttgca gtccgtgccg
      241 gcgccgggcg cgagtgcgtc gcaggtttgt ccaaacaatt gtggcaatgc cgatggcggc
      301 gagaacaaaa ccaatacgcg ggtcgataaa gtcgcgtccc aaagatctaa agacggggag
      361 ctcgaccggg atcgttgcgc cttgagtaga cttcagaatc aaaccacgcc aggcttgcaa
      421 tcctcccagc gtcacgatga acgctggaat atttatgtac gcgaccagtg ctccctgcag
      481 cgcaccaatc aacaacccca cgacaatggc agccgcgaga catggcagaa gtccccagtc
      541 ttgcgtcatc gccgccatgc cgcccgctaa ccccacgagc gcgcctacgg acaagtcgat
      601 gtttccgctg acaatgacca tgagcatgcc gacggccaac acgccggtca ccgctgtctg
      661 ctgaagcagc tttgagaaat taatcgcgcc gaggaaaagt ccgtaagggt gagtttcgct
      721 aatcgtggcc cactgaaaga aaagccagat gacaatcagc gcgagcagca tcgtgtaggc
      781 gcgcaatgct gaagtgcgaa gtttaaaacg gcctgccggg gcgattgcgg attcagtcat
      841 tttctgtgtt caaaaaagat gcttcgttta gacggcggac tctctgtctc tttgtggttc
      901 tccctgtctc tgtggtgaag aacgttaact aaccacaggg acattgagtt cgcacagagg
      961 cacagagaaa cctttcacgc tgctaatcgc gcatgtccgg tggcgcacga catcacggct
     1021 tcgggcgtcg cttctttgcg ggtgaactcg cccgtcacgc ggccttcgtg cagaacgatt
     1081 attcgatctg aaagacccag cacctcaggc agctcagatg aaaccaacac gatcgccagt
     1141 ccactctcag ccagccgatt aatctgagcg tagatttcct gttttgcccc gacatcaatg
     1201 ccgcgtgtcg gctcgtcgag aaacagcacg cgtggatttg tcagcagcca cttagccagt
     1261 acgactttct gttgattgcc gccggacaga gtgccggcga tcgtaaaaat cgagctcgct
     1321 ttgattcgca gctcgccggc cgcccgctcg gccgcggcgg cttcggcatc ttcgtcggta
     1381 aagaatcggc ccgaaagccg atccagaccg gccagcgtca tatttttgag tattgtctga
     1441 tcgaggacca gtccatatcg cttccgatct tccgtgacga aaccaatgcc gcgttcaatg
     1501 gcatcacacg gactattgat ctgagctcgc ttcccctgga cgaacacgtc cgcggactta
     1561 cggccagcgt gcgcgccaaa tattgccatc agcaattcgc tgcggcccga acccatcagg
     1621 ccggctatgc cgagcacctc gcctttgcga acgccaaagc tgacgctgtt aactaactgc
     1681 ttgccgggaa ctgaaggatc ttcgaccgtg acattgcgca cttcgaacac cacttcgccg
     1741 cgttcgtgct tcgcttccgg aaagatctga tcgaccgcgc gaccaaccat ctgggcgatg
     1801 acgcgtggct cgttcaaatt agacgtggca ttcgtctcga tcgtcttgcc atcacgcagc
     1861 accgtaaccc gatcactgat gcgaaacact tcttcgagtt tgtgcgagat gtatatcatt
     1921 gccacgccgc gcgcgcgcag acgcttcaga attccgaaca gcgtctcgac ttctgtgtcg
     1981 gtcagcgcgg cggtcggttc atctagaatt agaatacgcg cgtcctgcga aagggctttc
     2041 gctatttcga cgagttgttg cgttccgata cccagattaa tgacgggcgt gcgtggatca
     2101 agcgcgagat gaagttcgtc caggagcttt tgcacgcggc tgtaaagctc ttcccagttg
     2161 atcacgccaa agcggcgcgg ggcgcggccg agaaagatgt tttccgccac gctgagatcg
     2221 cgcaccag
//
LOCUS       DATDBY010000573         2045 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2380672, whole genome shotgun sequence.
ACCESSION   DATDBY010000573 DATDBY010000000
VERSION     DATDBY010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2380672"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..935)
                     /locus_tag="VIT19_10755"
     CDS             complement(<1..935)
                     /locus_tag="VIT19_10755"
                     /inference="COORDINATES: protein motif:HMM:NF010539.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEY5839504.1"
                     /translation="MNILSGFFTEDLAIDLGTVNTVVYTPTEGVVLNEPSVVAVNKYS
                     REVISVGSPALKLLGREPNDTEVYRPLRRGAIDNFEISQVFLRAIISRVQKHDHPKRS
                     HLVVGVPGSSTPLERRSVRDAARDAKAGRVDLIDEGLAAAIGAGLDFEDEHAHLVVDI
                     GGGTTNIAILASGGVVSSVSLPAAGNAMDDAIRDYLRLRYAVAFGERTIEHIKCELGS
                     ATAFHHSQLDRDVEIVGKQLANGAALPVTISAREVRTALEPVLSEIISAVRRVIEDAS
                     PEVTADIHYSGVILTGGGALLHGMSDRLQSELDLKV"
     gene            complement(1139..1708)
                     /locus_tag="VIT19_10760"
     CDS             complement(1139..1708)
                     /locus_tag="VIT19_10760"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY5839505.1"
                     /translation="MKVVNRLLLSAFLIGLVALAVQPLSLQPTITNQSPLTAPRIVVK
                     KAERRLFLYDGNKLVRTYRIGLGLSPKGDKVRQGDRRTPEGDFYIFTRNDKSAFYLSL
                     GVSYPNAPHADRGLRDGLISKSQHDTIMRALKLKKTPPQNTALGGDIYIHGNGASSDW
                     TWGCVALENEDMRELFNAVSVGTPVTIHP"
BASE COUNT          429 a          598 c          554 g          464 t
ORIGIN      
        1 acttttagat cgagttcact ttgcaaccga tccgacatcc cgtgaagcag tgcgccgccg
       61 ccggtcagaa tcactcccga atagtgaata tcggcggtaa cttccggact ggcgtcttca
      121 atcacgcgcc gcaccgctga gatgatttcc gacagcaccg gttcgagcgc cgttcggact
      181 tcgcgcgcac taatcgtcac gggcaaggct gccccattcg cgagttgctt gccgacaatc
      241 tcgacgtccc gatcgagctg tgagtgatga aatgccgtgg ccgagcccaa ctcgcacttg
      301 atgtgttcga tagtgcgctc gccaaatgcg actgcatagc gcaaacgcag atagtcgcga
      361 atcgcgtcat ccattgcgtt gcccgcggcc ggcaggctta ctgaactaac cacgccgccc
      421 gacgcgagaa tcgcgatgtt cgtggtgccg ccaccaatgt cgacgaccag gtgcgcgtgt
      481 tcgtcttcga aatccaggcc ggcgccgatc gccgccgcca gtccttcatc gatcagatca
      541 acgcgcccgg ctttcgcgtc gcgcgccgca tcgcgcacgg agcgacgctc gagcggcgtg
      601 gatgatcccg gcacgccaac gaccaggtga cttcgttttg gatgatcgtg cttctggacc
      661 cggctgatga ttgcgcgcag gaacacctgc gagatttcga agttgtcgat cgctccgcgt
      721 cgcagcggcc gatagacctc cgtgtcgttc ggttcgcgac ccagtaactt taatgccggc
      781 gagcctaccg aaattacctc gcggctgtac ttgttgacgg cgaccaccga aggctcgttc
      841 aaaacgacac cttcggttgg cgtgtaaaca accgtattga ctgtgcctaa atcaatcgcc
      901 aaatcttccg tgaaaaatcc gctgagaata ttcatgtccg tgactccttg tacgcgcgct
      961 ctgtgtagct gcgaaattca tcgctgacgc agcaaccgat atgccacccg aataacattg
     1021 ccattgagca gtgagcccac gaaatcccgc ggaaactgcg cgatttaacg gctgacagtt
     1081 tctgtccgga cctgaggccg ctcgataatc ggacgctgag gaaattctgt cgccgatttt
     1141 atggatggat tgtcactggc gttcccacag aaaccgcatt gaacagctct cgcatatctt
     1201 cgttctccaa tgccacgcaa ccccaggtcc aatcactgct cgcgccgtta ccgtgaatat
     1261 agatgtcgcc acccaaagcc gtgttctgtg gcggcgtctt tttcaatttc agcgcgcgca
     1321 tgatcgtgtc gtgttgcgac tttgagatca gtccatcgcg caggccgcgg tcggcgtggg
     1381 gcgcgttcgg atagctgacg ccgagagaca gataaaatgc gctcttgtca ttcctggtga
     1441 agatgtagaa gtcgccttcg ggagtccggc gatcaccctg tcgcactttg tcgccctttg
     1501 gactcaggcc gagtccaatg cgatacgttc tcaccaactt gtttccatcg tagagaaaca
     1561 aacggcgttc agctttcttg acaacaattc gcggcgccgt gagcggcgat tgattggtga
     1621 tcgttggctg aagagaaagt ggctggacgg cgagagccac cagcccaatc agaaatgctg
     1681 ataacagtag tctgttaacg accttcattg ataagagaat tcagccctgt cattcacagc
     1741 tcgcttcagc gaggtgtgcg cggctcgttc ggaactcggc aaccgtttta acggtttgca
     1801 aaagccgttg aaacggctca gaccgttagt ctgttcgcag acacctcgct gaagcgaggt
     1861 gtgaatgaga ctaccgcaag ccacgttact tagacgccca tttccgggtc cagttccgtt
     1921 ctactgacga tttcgatgag cgaatttgcg tcccggcgag agacattgtg ggaacctggt
     1981 acttccagaa cgcgcgcgac ggtttcttcg ttggccttgc gaataatgat ctcgtcgccg
     2041 gcttt
//
LOCUS       DATDBY010000574         4692 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2132961, whole genome shotgun sequence.
ACCESSION   DATDBY010000574 DATDBY010000000
VERSION     DATDBY010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4692
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2132961"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..564)
                     /locus_tag="VIT19_10765"
     CDS             complement(58..564)
                     /locus_tag="VIT19_10765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839506.1"
                     /translation="MKRLSIIGIFGLLLVASATVSAQKLDFNGSWTMDRARSFGLPGN
                     MNQTMTVTQSGDEIQVETKLLQPNNERIVKDSYVLDGKERDFSPPPPPNAPANAPPPK
                     GKRTAYWMPGNKGILVDDVTTTETPNGPSVTKTTRKWTLSNGELVIDMYVDNPNVSYE
                     AKRVFKKN"
     gene            complement(693..2198)
                     /locus_tag="VIT19_10770"
     CDS             complement(693..2198)
                     /locus_tag="VIT19_10770"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5839507.1"
                     /translation="MFQTQESKPWYQSLPGLIVASVLLPPVGIVLLWMRRGSPIFVKA
                     LATVAILVLGAGYVFLFSVWRRSAQNEAQYDLVEQFHAQQQSASAQQPIAQQAQASPG
                     QAQAAASPGAEAAFAHATRNYWTNYRGPNRDGRYEEAPVLTSWPAGGLTPIWKQPVGI
                     GYASFTVADGAAYTIEQRRRQEVVVAYDAATGRQLWTQAWNAEYSDSTGDGPRSTPTW
                     DEGRLYVLGATGELRCLDAKSGQVFWGKNILSENGASNLPWAMAASPLIVDDKVIVLP
                     GGSGGKSVVAYNKMTGAPVWKSLDDRQAYVSPMLVSLNGRRQILVVSSTRAVGLVPEN
                     GQLIWSYTWDTDMGINASQPIIVSANRFFISSGYGKGAALVEVNGANARTIWENINMK
                     NKFNSSVLHQGHVYGLDEGILSCVDVNTGERKWKGGRYGYGQLLLAGGNLIVITDTGE
                     LALVKAAPDQFSELARFQAIEGKTWNYPAIAGGRLLVRNANQMAAYNIAAK"
     gene            complement(2265..3596)
                     /locus_tag="VIT19_10775"
     CDS             complement(2265..3596)
                     /locus_tag="VIT19_10775"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5839508.1"
                     /translation="MKTSYAIKLIIAVGLLLVLTSFTMTALSANWPQWRGTGSGVSEE
                     KNLPTAWNTSQGIKWKTPIAGRGHSSPVVWGNKVFLTSAIEGEVVPGAKAVKHVMPND
                     KEFLHPDSVGADRKHTFKVIALNADTGKILWQQTAWEGTPYDNRHRKSSYAASTPATD
                     GKMVFAFFGTEGLYAYDLNGKLAWKADFGKLGTVGMGTGTSPIVFENLVIVQCDEENG
                     GASFIVAVDKKTGKEAWRVPRKVQVSWATPMLVSNGKRTELITVGTEAVVAYDPATGK
                     ELWKHKGVESNAIPSPVANQEMVFVSAGFPAKIVMAIQLGGSGDLKETVAWKYSKGTA
                     YVPSPILYGDYLYLTTDRGILTCLNAKTGEVVYEGGRIPIPATFTASPVAFDGKILMT
                     SEDGDTFVVKAGPKHEILGTNSIGEPVYASPAISGQRIFIRGEKNLYAIGK"
     gene            complement(3901..>4692)
                     /locus_tag="VIT19_10780"
     CDS             complement(3901..>4692)
                     /locus_tag="VIT19_10780"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5839509.1"
                     /translation="YASSPIIYKNLVIVQADLQKNSFVAAYDIKSGKQVWKTPREEIP
                     SWSTPTVYAGRTRAELVTNGTKAIRGYDPMTGKELWRLTPNSEIATPTPFAAHDLIYV
                     TNGYRPIQPIYVVRPGATGDITLKDGKDSSEFIAWSKPRGGPYMPTPIVYGDFFYTLS
                     NQGVMTAYNAKTGERVYQERLGGTGGAFTASPVASDGKIYLSSEDGDVFVVKAGAKHE
                     LLAKNPVGEVMMATPAISDGLLIVRGINHVFAFGNASASKSKPGN"
BASE COUNT          975 a         1366 c         1249 g         1102 t
ORIGIN      
        1 gtccactaaa tcttgatttc ttgatccggt cgctaccgct ctcggttctg acacgcctca
       61 attcttctta aagacccgct tcgcctcgta agagacgttt ggattatcga cgtacatatc
      121 gattaccaac tcgccgtttg acagggtcca cttgcgagtg gttttggtga cgctcgggcc
      181 atttggagtt tcggtcgtcg tcacgtcatc caccaggatc cctttgttgc cgggcatcca
      241 gtaagcggtg cgctttccct tgggcggagg agcgttggcc ggagcatttg gcggcggcgg
      301 cgggctaaaa tccctctcct tgccatcgag aacataactg tctttgacga tccgctcgtt
      361 gttaggctgg agcagtttgg tttcgacctg aatttcgtcc ccggactgcg tgacggtcat
      421 ggtttggttc atgttccccg gcagaccgaa gctccgcgcc cgatccattg tccaggaccc
      481 gttgaaatca agtttctggg cagagactgt ggcgctggcc accagcagca aaccgaaaat
      541 gccgattatc gataagcgtt tcatgattca actcccgggt tgtttggcct tcttctctgt
      601 gtctctgtgc tggctcggtg gctctgtggt gaataatcgc gcgacaaaca caaccacaga
      661 gacactgaga tctcacagag ccactgagca tttcacttcg ccgcgatatt gtaagcggcc
      721 atctggttgg cattccgtac aagcaaacgt ccgccggcga tcgccggata gttccaggtc
      781 tttccttcga tcgcctggaa gcgggccagt tctgaaaact gatctggcgc agctttcacc
      841 agggcaagtt cgccggtatc cgtgatcacg atcaaattac cccccgcaag aagtagctga
      901 ccgtagccgt agcgcccgcc tttccatttg cgttcgccgg tattgacatc gacgcagctt
      961 agaattcctt cgtccaaacc gtaaacgtga ccctggtgaa gaacagagct gttgaacttg
     1021 ttcttcatgt tgatgttttc ccaaatcgtt cgcgcgttag ccccgttgac ttcgaccagg
     1081 gccgcccctt tgccgtagcc cgacgaaata aagaatcgat tcgcactaac gatgatgggc
     1141 tgcgacgcgt tgatgcccat gtccgtgtcc caggtgtagc tccagatcag ttgcccattt
     1201 tcagggacga ggccaaccgc gcgcgtcgaa ctgacgacca ggatttgacg acggccgttc
     1261 aagctaacaa gcatcggcga aacgtaggcc tgacggtcat cgagcgactt ccaaaccggc
     1321 gcgccggtca tcttgttgta ggccacaacc gattttccgc cgctgccgcc cggcaacacg
     1381 atgactttgt cgtcaacgat caatggcgaa gcggccatcg cccagggcag attcgacgcg
     1441 ccattctcag aaagaatgtt cttgccccaa aacacctggc cgctcttcgc atcgagacac
     1501 cgcaactcac cggtggcgcc taaaacgtag agtcgccctt cgtcccaggt gggcgtcgag
     1561 cgcggcccat cgccggttga gtcgctgtac tcagcattcc atgcttgcgt ccagagttga
     1621 cgaccagtgg ctgcgtcgta agcaacgacg acttcctgcc ggcgacgttg ttcgatggtg
     1681 taggcagcgc catccgcgac tgtgaacgat gcgtacccta tgccgaccgg ctgcttccaa
     1741 attggcgtta agcctccagc cggccaactt gttagcacgg gagcttcttc gtagcggcca
     1801 tcgcggtttg gtccacgata gttggtccag taattcctgg tcgcgtgggc gaaggcagct
     1861 tctgctcccg ggctggccgc agcttgtgcc tgaccgggac tggcttgcgc ttgttgagcg
     1921 atgggttgct gggcagacgc gctctgctgt tgcgcatgaa actgctcaac cagatcgtat
     1981 tgagcttcat tctgagccga gcgacgccac acggagaaca gaaaaacgta accggcacca
     2041 aggacgagaa tcgcgacggt cgccagagcc ttgacgaaaa tcggactgcc ccgtcgcatc
     2101 cataacagga caattccgac cggcggcaac aaaaccgatg cgactatcaa tcccggcaaa
     2161 gactgatacc agggcttcga ttcttgggtc tgaaacattt ttggcttccc tcacttaacg
     2221 ctaaaacgat ctcaaaaggg agactgttaa caaaccgggg ctggtcactt cccaatcgcg
     2281 tacagattct tctcgccccg aatgaaaatc ctctgcccgg aaattgccgg cgaggcgtac
     2341 acgggttcgc caatcgaatt cgtgccgaga atctcgtgct ttggtcccgc tttcacgaca
     2401 aatgtatcgc cgtcctcgct ggtcatcaga atctttccat cgaacgccac tggcgaagca
     2461 gtaaaagtag caggaatcgg aatccggccg ccttcgtaca caacttcacc cgtttttgcg
     2521 ttgaggcaag tgagaatccc ccggtccgtt gtcaggtaaa gatagtcgcc atagagaatc
     2581 ggtgatggca cgtatgcggt gccctttgag tatttccagg cgactgtctc tttaagatca
     2641 cccgagccgc cgagttgaat cgccataact atcttcgctg ggaaaccggc gcttacaaaa
     2701 accatttcct gattcgcgac cggagacggg atcgcattac tctcgacgcc tttgtgcttc
     2761 cacagttcct tgcccgtggc cggatcataa gcaacgacgg cttccgtgcc gaccgtaatc
     2821 aactcggtgc gcttgccgtt tgaaaccagc atcggcgtgg cccagctcac ctgaacctta
     2881 cgcggcaccc tccaagcctc tttgccggtt ttcttgtcga ccgcgacaat gaacgacgcg
     2941 cctccgtttt cctcatcgca ctgaacaatc accagattct caaaaacgat tggcgaagtg
     3001 ccggtgccca tgccgaccgt gccgagtttc ccgaagtcag ccttccatgc aagtttgccg
     3061 ttcaaatcgt aggcgtagag cccttccgtg ccaaagaacg cgaacaccat tttgccgtcg
     3121 gtcgccggcg ttgacgccgc gtaagagctc ttgcggtgac gattgtcgta tggcgtgccc
     3181 tcccaggcag tctgctgcca aagaatcttt ccagtatcag cgttgagagc aatcactttg
     3241 aaagtgtgtt tgcgatcagc gccgacgctg tccggatgga ggaattcttt gtcgtttggc
     3301 atcacgtgct tgacggcctt cgcgccgggc accacttcgc cctcgatcgc agaggtcaag
     3361 aagactttgt ttccccacac gactggcgac gaatgtccgc gaccggcaat cggcgttttc
     3421 cacttaatgc cctgtgacgt gttccaggcg gtgggcaggt tcttctcttc agaaacgccc
     3481 gagccggtcc cgcgccattg cggccagttg gcgctcaggg cggtcatcgt aaatgaagtc
     3541 aaaaccaaaa gaagaccaac agcgatgata agtttgattg cgtaagaagt tttcatatgg
     3601 tggttccttt gcttaatttg cttgtccagt ctgagtcatt caatgacctg caattagcct
     3661 gcgaagcagg cgaaagcgta aagcctgggg tggagcgaag cggaacccca ggtaccgccc
     3721 gacaattgat tcaatagcct gcggagcggg cggcagattc ttcggctagc tctgtcgccc
     3781 gtttcacggg cttcgtcgat tttcttcacg tgacccaggg ctttatgctg acgcctgctt
     3841 cgcaggctcg ttgtacgctc cggcgcaatt gattcagtgt gaacgtcatc ttacggtttc
     3901 ttagtttccc ggtttactct tcgaggcact cgcgttgccg aaagcaaaca cgtgattaat
     3961 gccgcggacg atgagcaaac catccgaaat cgccggcgtg gccatcatca cttcgccgac
     4021 cgggttctta gccaacaact catgctttgc cccggcctta acgacgaaga cgtctccgtc
     4081 ttcactcgac agataaatct ttccatcgga ggcgactggt gaagctgtaa atgctccgcc
     4141 ggtgccgccg agccgctcct gatacacgcg ctcaccggtc tttgcgttgt aggccgtcat
     4201 cacgccctgg ttcgaaagcg tatagaagaa atcgccatag acaatcggtg tcggcatgta
     4261 tggcccaccg cgcggtttgc tccacgcaat gaactcagac gagtctttgc cgtccttgag
     4321 cgtgatatcg cccgttgcgc ctggccgaac tacgtagatt ggttgaattg ggcgataacc
     4381 gttggtcaca taaatcaaat cgtgcgcggc aaacggcgtg ggagtcgcaa tctccgagtt
     4441 cggcgtcaat cgccaaagct cttttcccgt catgggatcg taaccgcgga tggccttggt
     4501 cccgttggtg accaattcag cgcgcgtcct gccggcgtaa acggtgggcg tgctccatga
     4561 cggaatttct tcacgcggag ttttccaaac ctgcttgccg gacttgatgt cgtatgcggc
     4621 cacgaacgag ttcttctgaa ggtccgcctg aacgattacg aggttcttat aaataatcgg
     4681 cgagctggca ta
//
LOCUS       DATDBY010000575         3345 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_260348, whole genome shotgun sequence.
ACCESSION   DATDBY010000575 DATDBY010000000
VERSION     DATDBY010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260348"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..968
                     /locus_tag="VIT19_10785"
     CDS             <1..968
                     /locus_tag="VIT19_10785"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5839510.1"
                     /translation="AFGRKQILQPLPLNLNDVITDLNKMLRRLIGEDIRLSARLDLDL
                     KKIKADPGQIEQVLMNLVVNARDAMPRGGNLTIETANIQIDEKYAGRHIGVSSGAYVM
                     LAVSDNGTGMDHETESKIFEPFFTTKDKGKGTGLGLSTVYGIIKQSGGNIWVYSELGH
                     GTTFKIYLPQVDDPVTTEQAKLEDDSIPGGSETVLLVEDEDVVRGLAQRILEEAGYRV
                     ITANGGEEAVTWCANNSETVHLLLTDVVMPDTSGKDLAERLTSLSPQTKVLFMSGYTD
                     EAIVHHGVLDSNVEFLQKPFTPTALSRKVRQVLDSNGLKLTSGEN"
     gene            972..2786
                     /locus_tag="VIT19_10790"
     CDS             972..2786
                     /locus_tag="VIT19_10790"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY5839511.1"
                     /translation="MDKRQDKPSILIIDDEEPIRGLLTETLSDRFFCTAVDSAEKALA
                     VLANVEFSLVVSDINMSGISGLELVPHIAQMAPDTVVVMISGQQAIESAIEAMRVGAY
                     DYITKPLDIRHVRAAVERAMTHHELLTQKRRYENHLEELVEKRTAEVQHLAYYDSLTD
                     LPNRALFGDRLQQTLATAAHNNQLAALVLVSLDRFEKINDTLGHATGDLLLQQVAVRL
                     AQRTKKGDTIARFREDEFAFLLTSIERTDEGAEFARELLEALLLSFTLGAQELYLNAS
                     IGISVFPEDGADAETIMKNAGAALFRAKRKGGSGYEFYSTDMNAEAVKRLALETDLRR
                     AIANQEFVTYYQPVIDFSSGEVISLEALARWQHPELGILAPAEFIDIAEDTGMILALG
                     DQVFASAAAQTRCWQDAGLPDLRIAINVSARQFREKNFPDRIAQILGQAHLDPQSVEL
                     EITETSIMEHGESALTVLREIRDMGIRIAIDDFGTGYSSLSYLKRLPIDCVKLDRSFV
                     SGATTDPKDAALVMAIITLAHNLDLKVVAEGVETEEQRDFLKLLRCDAGQGYLFGKPM
                     PAAVFEATISGNPRRKRNALISSGPNKSKVSHRIEIAR"
     gene            2783..>3345
                     /locus_tag="VIT19_10795"
     CDS             2783..>3345
                     /locus_tag="VIT19_10795"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5839512.1"
                     /translation="MNPELQALVIDDEQPVRDFVATILRADGWQVEQSSSAEEAFEMS
                     HHSNWAVVFCDVLLGGANGFEVLRRFKQDLPETKVVLMTGHGSGEGALDATAFGAYDY
                     LLKPFGPEDLQSLSAALREQLTNHRNVFRRRADAPEGDINLIGRSQVFIEVMKQVGRV
                     AATNLPVLLTGESGTGKELIAAAIHRR"
BASE COUNT          791 a          889 c          962 g          703 t
ORIGIN      
        1 tggcgtttgg ccgcaagcaa attcttcaac cgctgccgtt gaacctgaac gatgtcatca
       61 cagacttgaa caagatgctg cggcggctga ttggcgagga cattcggcta tcggcccggc
      121 ttgatcttga tttgaaaaag atcaaagcgg accccggcca aatcgaacag gtgctgatga
      181 atctcgtggt caacgcgcgg gacgcgatgc cgcgtggcgg aaatctaaca atagaaactg
      241 ccaatatcca gatcgatgaa aagtacgccg gccgtcatat cggggtgagt tcaggcgcct
      301 atgtgatgct cgccgtcagc gataacggca cgggcatgga ccacgaaaca gagtcgaaaa
      361 tttttgagcc cttctttacg acgaaggata aaggcaaagg caccggcctg ggactttcca
      421 cggtctacgg aatcataaaa caaagcgggg gaaatatctg ggtttatagc gagctcggtc
      481 atggaacaac ttttaagatc tacctcccgc aagtcgacga cccggtaaca acagagcagg
      541 caaagcttga ggacgattct attcccggcg ggtccgagac tgtgttgctg gttgaagatg
      601 aggacgtggt gcgcggcctg gcccagcgca tcctcgaaga ggccggttac cgcgtgatca
      661 ccgccaatgg cggagaagaa gcggtcacct ggtgtgcaaa caattccgag acggttcacc
      721 tgctgctcac cgatgtagtt atgccggata cgagcggcaa ggatctcgcc gagcggctga
      781 cttcactcag cccacaaaca aaagttttat tcatgtcggg ttacaccgac gaggccatcg
      841 ttcatcacgg agttctggat tcgaacgttg aattccttca gaaaccgttc actcccacgg
      901 ccctctcgag aaaagtccgc caggtactcg atagcaacgg cctcaaactg acttccgggg
      961 aaaattgagg aatggataag cgacaggata aaccgagcat tctgataatc gacgacgagg
     1021 aaccaatccg gggcttgctt acggaaacgc tgagtgatcg cttcttctgc acggccgttg
     1081 attccgcgga aaaggcgctg gcggttttgg ccaatgtgga gttcagcctg gttgtcagtg
     1141 atatcaacat gtcgggaatc agcggcttgg aactggtgcc gcacatcgct cagatggctc
     1201 ccgacacggt agtggtaatg atcagcggac aacaggcaat tgaatccgcc atcgaagcaa
     1261 tgcgcgtggg cgcttacgac tacatcacca agccgctcga cattcgccac gttcgggctg
     1321 cggttgagcg ggccatgacg catcacgagc tgctaacgca gaagcggcga tacgaaaacc
     1381 atctcgaaga gttggtggaa aagcgcactg ctgaggttca gcatcttgcc tattacgatt
     1441 ccctgacaga cttgccgaat cgcgctctct ttggcgatcg attacagcag acgctggcta
     1501 ccgccgcgca caataatcaa ctggccgccc tggtcctggt ttcgctcgac cggttcgaga
     1561 agattaacga tacgctgggc cacgcaaccg gcgatctgtt gctgcagcag gtggctgtcc
     1621 gtctggcgca gcggaccaaa aaaggggaca cgattgctcg ttttcgcgaa gatgaatttg
     1681 cctttcttct cacctcgatc gagcgaacag acgagggggc tgaatttgct cgcgaactcc
     1741 tcgaggccct gctgttgtct tttaccctgg gggcgcagga gctttatcta aacgcgagta
     1801 tcggcatcag tgtgtttcct gaggacggcg ccgacgccga aaccatcatg aaaaatgcgg
     1861 gagccgcatt gtttcgcgca aaacgaaaag gcggcagcgg ttatgaattt tattcgacgg
     1921 acatgaacgc ggaagcggtt aagcggctcg ctctggaaac ggatctgcgt cgcgcgatcg
     1981 ctaatcagga gtttgttacg tattaccagc cggtgattga cttctcatcg ggcgaagtca
     2041 tcagtcttga agccctggcc cgttggcagc atcccgagtt gggaattttg gctccggcgg
     2101 aattcattga tattgccgaa gacaccggga tgattctggc tctcggggat caggtattcg
     2161 caagtgccgc agcccaaact cggtgctggc aggacgccgg tcttccggat ctacggatag
     2221 ccatcaacgt ctcagcccgt cagttccggg agaaaaactt tccggatcgc atcgcccaga
     2281 tcctgggcca ggcccatctc gacccgcaaa gcgtcgaact cgaaatcacg gaaacgtcga
     2341 tcatggagca cggtgagtcc gcgctgacag tgctccgcga gattagagat atgggcatcc
     2401 gcatcgcgat tgatgatttt ggcactggtt actcatcgct tagttacctc aagcggctgc
     2461 cgatcgactg cgtcaagctt gaccgttcat ttgtaagcgg cgccaccacc gatccaaaag
     2521 acgccgccct cgtcatggcg attattactt tggcacacaa ccttgatctg aaagtcgtgg
     2581 ccgaaggtgt ggaaactgaa gagcagcgcg attttctgaa actgttgcgg tgcgatgcgg
     2641 ggcagggtta cctgttcggc aaaccgatgc ccgcagctgt gttcgaagcg accataagcg
     2701 gcaatccacg acgcaagcga aacgccctta tcagcagcgg gcccaataaa tcaaaagtca
     2761 gccaccgaat cgagatagca cgatgaatcc agaactccag gccctggtaa ttgacgacga
     2821 acagccggtt cgcgatttcg ttgcaacgat tttacgcgcg gatggctggc aagtcgagca
     2881 atcctcatca gccgaagagg ccttcgagat gtcgcaccac agcaactggg cggtggtctt
     2941 ctgtgatgtc ctgctcggcg gtgcaaatgg gttcgaggtc ttgcgccgct ttaagcagga
     3001 tcttccggaa acaaaagtgg tcctgatgac cggacacggc agcggtgaag gagctttgga
     3061 cgccacggcc tttggggctt atgactatct cttgaagccc tttggacccg aagatttgca
     3121 atcactttcg gcggctttgc gtgaacagtt aactaaccac cggaatgtgt tcaggcggcg
     3181 tgcggatgcg ccggaaggcg acatcaacct gattgggcgg agccaggttt tcattgaagt
     3241 aatgaaacaa gtgggccgcg tcgcggccac caatttgccg gtgctgttaa ccggagagtc
     3301 cggcaccggc aaggagttaa tcgcggcggc catccatcgt cgcag
//
LOCUS       DATDBY010000576         4283 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1055506, whole genome shotgun sequence.
ACCESSION   DATDBY010000576 DATDBY010000000
VERSION     DATDBY010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4283
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1055506"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VIT19_10800"
     CDS             complement(<1..246)
                     /locus_tag="VIT19_10800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839513.1"
                     /translation="MSSNKPSVDVALEKLQRETFDYFLHETNPANGLVIDKTAPDWPA
                     SIAATGLALACYPVGVERGFMSRAAAVERTLATLRFFW"
     gene            complement(364..747)
                     /locus_tag="VIT19_10805"
     CDS             complement(364..747)
                     /locus_tag="VIT19_10805"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY5839514.1"
                     /translation="MSCCSDVMKPIEASSCCTPQDTAAHAARAIRDSGCGCAPVVEDT
                     ENLKLVGVVTERDVCCSVAADDRRASEVGVEEIMRPASACCDADESIEDGRRKLHEHR
                     ATSLPVVDKAGSCCGTVSAHRLEKS"
     gene            complement(854..2089)
                     /locus_tag="VIT19_10810"
     CDS             complement(854..2089)
                     /locus_tag="VIT19_10810"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5839515.1"
                     /translation="MVSKHLFVLLACLFVVMIGFGITLPVLPFYVERLALAEGAIRQS
                     VVLHVGLLTGVYALMQLIFAPLWGRWSDRIGRRPLILIGIAGYVIAQVLFGLATSLWL
                     LYMARILGGILSSATLPVSAAYVADLTTEKERSRGMAWLGTAVSLGVVVGPALGGLLS
                     RRDLHFNWSAGHLKVDSFSTPFFAAALLGLLTLLAALRWLRESLPKTSAQDTNKETRT
                     DWRTLIKSLSPLLALALAGQFALTIFEGTFALYAQAKFNYGPVEVGAVFVVCGLVMTV
                     FQAGAVGFLAGKISELIQIGAGFALMGTGIALLATAQTKFLVFAFVALLSLGMAFIAP
                     NLAALVSKRGGEQQAGASLGIQNAANSLGQSVGPLLGGVLFIWQTNAPYLFSGAILLS
                     LALVIGWKVLNRQREARLA"
     gene            complement(2129..2314)
                     /locus_tag="VIT19_10815"
     CDS             complement(2129..2314)
                     /locus_tag="VIT19_10815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839516.1"
                     /translation="MMASRVAGQLNKENNVEVETVKGGLGEFSVYIAEQKVIDTNRFW
                     YPTPNKIVKKVQVLLAQ"
     gene            complement(2397..2669)
                     /locus_tag="VIT19_10820"
     CDS             complement(2397..2669)
                     /locus_tag="VIT19_10820"
                     /inference="COORDINATES: protein motif:HMM:NF039498.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5676 family membrane protein"
                     /protein_id="HEY5839517.1"
                     /translation="MLNIKIVSWSLGLFTAISFVLCVIYGLIVPPSLHYMAPFLEMVL
                     PAFKWLTFWGFCLGLIESFLYGAYAGLLFVPIYNFLSRRWGVPAKQ"
     gene            complement(2793..2921)
                     /locus_tag="VIT19_10825"
     CDS             complement(2793..2921)
                     /locus_tag="VIT19_10825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839518.1"
                     /translation="MLRCTCSVMVDMAGMVVIAVMVEVIVNEAGMKGKKTKRKVAL"
     gene            2927..3061
                     /locus_tag="VIT19_10830"
     CDS             2927..3061
                     /locus_tag="VIT19_10830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839519.1"
                     /translation="MKITTQNQFAVNHSMAFLLPVSHRASPSILEEASNDETLTFSVL
                     "
     gene            complement(3093..>4283)
                     /locus_tag="VIT19_10835"
     CDS             complement(3093..>4283)
                     /locus_tag="VIT19_10835"
                     /inference="COORDINATES: protein motif:HMM:TIGR01525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042625 - ATPase-coupled ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEY5839520.1"
                     /translation="IVFGIATFAGWYWVAGATLVFAMLLAITVVVIACPDALGLATPM
                     AIMVASGKGAQNGILFKDATALEEAGRLQAIIFDKTGTLTIGQPQVVEIVADGNPVTD
                     KELLRLVASLEQSSEHPLAQAVIEKAKADGVTLSAPSNFEAIPGHGARATVDRHTVLA
                     GNRKLMDDNRIALDGLNERAQALEQKGNTVVYSAVDGSPGGLIAIADAIRPNAKQAIE
                     QLAALGIEVAMLTGDNQGTANLVAKALGIKTVFAEVQPGQKAEKVKEMQARGLRIGMV
                     GDGINDAPALAQAEVGIAIGAGTDVAMETADVVLMKSDPFDVIGTVILSRATRRKMRQ
                     NLWWAAGYNVIAFPLAAGLLYPWTGWLLSPEVAALSMSGSTLIVVANALLLKRVKMSE
                     SAAA"
BASE COUNT          922 a         1335 c         1096 g          930 t
ORIGIN      
        1 ccagaaaaac cgcagcgtcg caagcgttcg ttctaccgcg gcggctcgtg acatgaatcc
       61 acgctcgaca cccacgggat aacatgccaa cgcgagaccg gtggcggcaa tactggcagg
      121 ccaatccggc gcggtcttgt caatcacgag accgttggcg ggattcgtct cgtgcaaaaa
      181 ataatcgaat gtttcgcgct gcaacttttc cagtgcgaca tcgacgcttg gtttattgct
      241 gctcatggtc tcatccggtt tgacgattac tctctcgtca aatgtactgg cgatgttttc
      301 gccaaagttc tcactcagct tgcggattgg ttgatcaacc ttctcgacgc cctcatcggg
      361 tacttacgac ttttcaagtc tgtgagcgct gacagtgccg cagcagctcc cggccttgtc
      421 cacaacgggc aagcttgtcg cgcgatgctc gtggagtttc cggcgcccat cttcaatcga
      481 ctcatctgcg tcacaacacg cagacgcggg acgcatgatc tcttcgacgc ctacctccga
      541 agcacggcgg tcatcagccg ctacgctgca acacacgtcg cgctcggtga cgacgccgac
      601 cagcttgagg ttttctgtgt cctccactac gggtgcgcac ccgcagcctg aatcgcggat
      661 cgctcgcgca gcgtgtgcag ccgtgtcttg cggcgtacaa cacgaagacg cttcaattgg
      721 tttcatcaca tcactacaac aactcatttc cttttcctcc ttcagtgttt gagttcgaaa
      781 ttcaaccctt ggtgctgggc gcaacagcgg atcaactccg aagtcgattt ctgttgtcgc
      841 ggtcgcctct tcatcaagca agtctggcct cgcgttgcct attcagcact ttccacccga
      901 taaccaaagc aagcgagagc aatatcgctc cgctaaacaa atagggcgca ttcgtctgcc
      961 agataaaaag cacgccgccc agaagcggtc cgactgattg accgagactg ttggccgcat
     1021 tctgaatgcc gagggacgcg cccgcctgtt gctctccgcc gcgctttgaa acgagcgccg
     1081 cgagattcgg cgcgataaaa gccattccta aggaaagcag cgcaacaaag gcaaagacaa
     1141 ggaacttcgt ctgcgccgtc gccagcagcg cgatgcccgt ccccatcaag gcgaagcccg
     1201 cgccgatctg aatcagctcg ctgatttttc cggcgagaaa tccgaccgca ccagcttgaa
     1261 aaaccgtcat caccagcccg cacaccacga agaccgctcc cacttcaacc ggaccatagt
     1321 tgaacttcgc ctgggcgtag agcgcgaacg ttccctcgaa gatcgtcagc gcgaattgtc
     1381 cggcgagtgc aagagcgagc aacggagaca gactctttat caatgttcgc caatccgtcc
     1441 tcgtttcttt gttcgtatct tgtgctgaag ttttgggtag cgattcccgc agccagcgca
     1501 atgccgcaag cagcgtcagc agtcctaaca acgccgctgc gaaaaacgga gtcgagaaac
     1561 tgtcgacttt gagatgcccg gcactccaat tgaaatgcaa atctcgccgc gacagcaatc
     1621 caccgagcgc tggtccgacg acaacgccga gactcaccgc tgttccgagc cacgccatcc
     1681 cacgactgcg ctctttttcg gtcgtcaagt cggcaacata cgctgctgag accggcagtg
     1741 ttgccgagga caaaatgccg ccgagaatgc gtgccatata aagcagccac agcgacgttg
     1801 caagtccgaa gagcacttgc gctatgacgt agcctgcgat gccgattaag atcagcggtc
     1861 ttctgccgat gcgatccgac cagcgtcccc acaagggcgc gaagatgagc tgcatcagcg
     1921 catagacacc ggtcaataac ccgacgtgca gcaccaccga ctgacgtatt gctccttctg
     1981 ccaacgcgag gcgttcgacg tagaagggca gcacgggcag ggtgatgccg aagccgatca
     2041 tcacgacaaa caagcaggcg agaagtacaa acaggtgttt actgaccacg ccacaaccct
     2101 tccatttgcc caacgcgctt tcaaaggtct actgcgcgag cagtacctgt acctttttta
     2161 caatcttgtt tggggtcggg taccaaaagc gattcgtgtc aatgactttc tgttcagcaa
     2221 tatagacact gaactcacca agcccgcctt tgaccgtttc tacctctacg ttattctctt
     2281 tattcagttg gcctgccaca cgggaagcca tcatttgctt aatgggtcaa acgggacagt
     2341 aatggattgc tactttcttc atggctcatc ccttctctaa attgtttgcg cgtgaactac
     2401 tgctttgctg gcacacccca ccggcggctg agaaagttgt agatggggac gaacaggagt
     2461 ccggcgtatg cgccgtagag aaagctctca atcaacccca ggcagaagcc ccaaaaggtc
     2521 agccacttga aagccggtaa aaccatctcc aggaatggag ccatgtagtg taggctcggg
     2581 ggaacgatca atccgtagat gacacacagg acgaagctga tggcggtaaa gagtcccagc
     2641 gaccagctca cgattttgat attcagcatt gcttttactc ctttacgatt cgcggttgct
     2701 cactgctatg tcacgggtga cagttttttc cttcaactcc cgagtgcgac tcgggttcag
     2761 ccttcaatgc tgatgcctac ctgaacccgt gttcacaacg cgaccttgcg cttcgtcttt
     2821 ttccctttca tccctgcttc gttgacgatc acctccacca tgaccgctat gaccaccatg
     2881 cccgccatgt ccaccatgac cgaacaagtg catcgcaaca aaggcgatga agatcaccac
     2941 ccagaaccag tttgccgtaa accattccat ggcttttctc cttccggttt ctcatcgcgc
     3001 ctccccgtca atacttgaag aagccagcaa cgatgaaacc ctcacgttct ccgttctgta
     3061 gttttactct gactgcattg cctcgcctcg tatcacgccg ccgcggactc gctcatcttc
     3121 acgcgcttca acaacagtgc gttagccacg acgatcaggg tcgagccgga catcgagagt
     3181 gccgcgacct cgggactcag caaccacccg gtccagggat agagcagacc ggcagcgagt
     3241 gggaaggcaa tgacgttgta cccggcagcc caccacaggt tctgccgcat cttgcgccgc
     3301 gtggcacggc tgagaatgac agtgccgatc acgtcaaacg ggtcgctctt catcaacacc
     3361 acatcagccg tctccatcgc tacgtcggtg cccgcgccaa tggctatgcc gacctccgct
     3421 tgcgccaacg ccggcgcatc gttgatgccg tcgccgacca tgccgatgcg cagcccgcgc
     3481 gcttgcatct ctttgacctt ctccgccttc tgtcccggct ggacttcggc gaagaccgtc
     3541 ttgatgccga gtgctttggc aaccaggttt gcagtgcctt gattgtcgcc cgtcaacatc
     3601 gccacctcga tgcctaatgc cgccagctgt tcaatcgcct gttttgcgtt cgggcgaatc
     3661 gcgtcggcga tggcgatgag tccgccggga gaaccatcca cggcggaata gacgactgtg
     3721 ttgccttttt gctcaagcgc ctgcgcccgc tcattcagcc catcgagggc aatgcggttg
     3781 tcgtccatca gcttgcgatt gcctgcgagc accgtgtgcc tgtcaactgt cgcgcgcgcg
     3841 ccgtgccctg gaatcgcctc gaaattcgac ggcgcgctga gcgtcacacc gtcagccttc
     3901 gctttctcga tgacggcttg cgccagcgga tgctcgcttg attgttctag cgaggcgacc
     3961 agccggagca attctttatc agtgacaggg tttccatcgg cgacgatttc tactacttgc
     4021 ggctgcccga tggtgagtgt gcccgtcttg tcgaagatga tcgcctgaag tctccccgcc
     4081 tcttcgagcg cggtcgcatc cttgaagaga atgccgtttt gtgcgccctt gccgctggcg
     4141 accatgatcg ccattggcgt ggcaagcccg agcgcgtcgg gacaggcgat aacgacgacc
     4201 gtgattgcta acagcattgc gaagacaagc gtcgctccgg cgacccagta ccagcccgcg
     4261 aaagttgcaa tgccgaagac gat
//
LOCUS       DATDBY010000577         6484 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_30447, whole genome shotgun sequence.
ACCESSION   DATDBY010000577 DATDBY010000000
VERSION     DATDBY010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6484
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30447"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(9..485)
                     /locus_tag="VIT19_10840"
     CDS             complement(9..485)
                     /locus_tag="VIT19_10840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839521.1"
                     /translation="MTNYARGVLMALATILTLLLVGAIAYGQRPRGAVTNLSATQQPL
                     FSEYKGIRLGMTAAEVRAKLGDPTLKADDQDYYVISQTEAAQFAYDKALKVVTISIDY
                     TGPGSPDYRNVVGASIDEKEDGALYKMVRYEAQRFWVSYSRTSGASPTVTITIQKM"
     gene            complement(516..1004)
                     /locus_tag="VIT19_10845"
     CDS             complement(516..1004)
                     /locus_tag="VIT19_10845"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEY5839522.1"
                     /translation="MPRNSEQSNIDRREFCNHVLLGSAGIVLTASQLKATAAVQPRHE
                     RVARYPPMKIEGAERVMPGSFLYFNYPKRDDLAVLVRNQEGEYIAFSRKCAHLGCSIE
                     FDSMRRCLACPCHRGIYDSRTGYVVYGPPPKPLDQIVLQMRTGGELWAVGKTIRTNDD
                     RA"
     gene            complement(1241..2602)
                     /locus_tag="VIT19_10850"
     CDS             complement(1241..2602)
                     /locus_tag="VIT19_10850"
                     /inference="COORDINATES: protein motif:HMM:NF013132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HEY5839523.1"
                     /translation="MTRTVESTSTRPHIRPLLALAIIAACLISSLVWIQEPLLQRALI
                     VAGICLTLWLTEVVPPYVPTLVLWALTPLLLLGLGDQFRLTTVLGWSANPVLALFLGG
                     FALSVAASRYGIDRLIAHLAVRLSGGSKLLLLVLTMAATAALSMWMSNIAAAAMMIAA
                     LSPLFAEVSKSDHFRRALLMGIALGANFGGMATPIGTGPNAIAIAAISSTRVITFTGW
                     MIFALPLTLGLLLVGLLLLMWRFRVRGPINNLQETRVRAPNFRARLVMLVFFLTVAAW
                     LTEPFHRVPSAIVALITTAVLFGSGLLQSKDLSRIDWSTLLLIAGGIGLGNLLEQSGV
                     VRAAAASMPWQDVPHVARIFTLCLASALFSALMSNTASVTMLIPLAAGIDPAPSTAIL
                     IAIAASLGIPFSISTPPNAMVYGEGGVTFSDLAVPGIVLLILGCILVSLTGPFVLKLV
                     GIP"
     gene            complement(2599..3315)
                     /locus_tag="VIT19_10855"
     CDS             complement(2599..3315)
                     /locus_tag="VIT19_10855"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HEY5839524.1"
                     /translation="MEHEHSIEAIQERLAAGPRHNYLRDWIYGGIDGSVTTFAVVSGV
                     VGARLSLVVILIIGFANLFADGFSMAASNFLGTKAEHDDMHRLEAIEHRHIELAPEGE
                     REEVRQIFARKGFSGADLDRVVELITSDRQRWVRTMLSEEYGLPLEARSPWFAAISTF
                     SAFLACGLVPLIPFLFGFNNPFVFSIVMTGGVFFAIGSVKSRWSTASWWSSGLTTFAI
                     GSIAAGLAYAAGVILKNLAQ"
     gene            complement(3346..3714)
                     /locus_tag="VIT19_10860"
     CDS             complement(3346..3714)
                     /locus_tag="VIT19_10860"
                     /inference="COORDINATES: protein motif:HMM:NF036463.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5335 family protein"
                     /protein_id="HEY5839525.1"
                     /translation="MKDNIERKGWARYLTQFNERNKSRPTWLQVFGEAGAQTEEQGLP
                     LVGISLEEKGADAPRVQIMLGGHDAIETRHLTHMISNVERLTPQVGTDGRDEAIEFVD
                     HRGEASLLIFKHRALMAAHV"
     gene            4027..5016
                     /locus_tag="VIT19_10865"
     CDS             4027..5016
                     /locus_tag="VIT19_10865"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5839526.1"
                     /translation="MRRLRWLTAALVLTLLLASSTNAQEQRIVTRTDFVSVNVIVTDK
                     SGRYIRGLKRADFELFDEKVKQEIAHFSSDPASVSLGIVYEVHPRTSDRRSAMLAALR
                     QFTRDLSEGDDFFFMAFGAQGSVTTGFVPTEEQVLNHLAALRPGGASSLYDAIYTAAD
                     QLRKQRNLKKALLIISDGDDDQSATSYKALRHRLREFDVQIYAVAIDNPARDRTAGYS
                     RWFFEDITRQTRGRAFVANAETSVGHAVLSEMARVSGGSAYYPETENEPELTGICSQI
                     ATELRQQYTVGFYPTDVESSKTWHRIKITLKPASGRRGLSLSYRQGYRLIGEK"
     gene            complement(5370..>6484)
                     /locus_tag="VIT19_10870"
     CDS             complement(5370..>6484)
                     /locus_tag="VIT19_10870"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5839527.1"
                     /translation="ERSLKELADIKFALDQSTIVAITDQTGIINFVNDQFCRISKYSR
                     EELLGQDHRLINSGYHSKEFIRDLWTTIASGKVWKGELRNLAKDGSIYWVDTTIVPFL
                     NSEGKPYQYVAIRHDITQRKVAEEQVLQQAAELQRAAQLSFVGELAAGLAHEIKNPLA
                     GIQGVVDILIRRRDKNDPEREALEGVRHEVERIDSTVRALLDRARPRLISVRASSLSD
                     IVVRAINLARAQLANITTSGRNVGIEFQPPGDPITIWIDPAQIEDAVLNLIINAIEAV
                     GDYGTVKIQVARSKNERSEEFEDEAIVEVSDNGRGIGEEDLARIFNPFFTTRTSGTGL
                     GLPAVRRIARAHGGRVEVNSTVGEGSTFSLHLPITR"
BASE COUNT         1556 a         1761 c         1766 g         1401 t
ORIGIN      
        1 tttgatcact acatcttctg gatcgtaatc gttacggtcg gcgatgcgcc gctcgtgcgg
       61 ctgtaggaaa cccagaagcg ttgtgcttca tagcgaacca ttttgtacag agcgccatct
      121 tctttctcgt cgatcgacgc accgacgacg ttgcgataat ccggggatcc cggtccggtg
      181 taatcgatcg agattgtcac aaccttcagc gctttgtcgt aggcaaactg cgccgcttca
      241 gtttgagaaa tgacgtagta gtcctgatcg tcggctttca gtgttgggtc gcccagtttc
      301 gcgcggactt ccgcagccgt catgcctaac cgaatgcctt tgtattcgga aaatagcggc
      361 tgctgcgtcg cggacagatt agtcacagcg ccgcgtggac gctgtccata ggcaatcgcc
      421 ccgaccagca acagcgtcag aattgtggct agcgccatta agacgccgcg tgcatagttt
      481 gtcatcgtta cctcctgcaa ttcgccgcgc gcttctcacg cgcggtcgtc gtttgttcta
      541 atcgttttgc caacggccca aagctctccg ccggtgcgca tctgcaaaac aatctgatcg
      601 agcggtttgg gcggtgggcc atagacgaca taaccggttc gcgaatcgta aattccgcga
      661 tggcacggac aggccaggca cctgcgcatt gaatcgaatt caatcgaaca tcccaagtgc
      721 gcgcacttgc ggctgaaagc gatgtactcg ccttcctgat tgcgcaccag caccgccaaa
      781 tcgtcacgtt ttggataatt gaaatagagg aacgaaccgg gcatgacgcg ctccgcgccc
      841 tcgattttca tcggcggata acgtgctacg cgctcgtgcc ggggctgaac tgccgctgtg
      901 gctttgagtt gactggccgt cagcacaatg ccggctgaac ctaaaagcac gtggttacag
      961 aactcacgcc gatcgatgtt cgattgttca gagttgcggg gcatgtcagt aacctcctcc
     1021 cgggttacca ctttcgttgt tccgctccga cgacgcgcgt tgagaaagtg gtttgccgat
     1081 caaaagagca agactcgtac cgacgcgaaa gccgcaactt gccgcacatt ttcgagtgtt
     1141 cgcgttatga gagttgagta aaagttcgca ggcgcgagaa actccgcaac ttgcaggggg
     1201 gaagcagact tagccgtaac aacgtgcgtg gctgcggcgg tcagggaatg ccaaccaatt
     1261 tgagtacgaa tggtccggtg aggctaacca gaatgcaacc cagaatcaat agcacaattc
     1321 cggggaccgc taagtcggaa aatgtgactc caccttctcc gtaaaccatt gcgttcggcg
     1381 gcgtgctaat cgaaaagggg attcccaacg acgcagcgat tgcgattagg atcgccgttg
     1441 aaggcgcagg atcgattccg gctgcgaggg gaatcagcat tgtgacggaa gccgtgttgc
     1501 tcattagcgc tgaaaacagc gcactcgcta aacaaagggt gaagatccgc gcaacatgag
     1561 ggacgtcctg ccacggcatt gaggcagcgg cagctctaac tacgcccgac tgctccaaca
     1621 aattgcccag tccgatgcca ccagcgatca gtaagagcgt tgaccagtcg attcgtgaca
     1681 gatctttgct ttgcaacagt cccgaaccaa agagaactgc ggtcgtgatg agcgcgacaa
     1741 tcgccgaagg aactctatga aacggttcgg taagccaggc cgcgaccgtc aagaaaaaca
     1801 cgagcatcac cagccgggcg cgaaagtttg gcgctctcac ccgagtctct tgcagattat
     1861 tgatggggcc gcggactcga aagcgccaca tgagaagcag cagaccgacc aggagaagtc
     1921 ctaaggtcaa gggcagagca aagatcatcc agccggtaaa cgtgattact ctggtggacg
     1981 agatagcggc aatagcgatc gcatttggtc ctgttccaat tggcgttgcc atacccccaa
     2041 aatttgcgcc caaagcaatc cccatcaaca gagcgcggcg aaaatgatca ctcttggaaa
     2101 cttcggcaaa cagtggggaa agtgcggcga tcatcatcgc ggcggctgca atattcgaca
     2161 tccacattga gagcgcagcc gtggccgcca tagtcagaac taaaagaaga agcttcgaac
     2221 cccctgagag gcggactgcc aaatgggcga tgaggcgatc gattccataa cggctagcgg
     2281 caacactcag cgcgaacccg ccgagaaaca gcgcgagaac gggattggcc gaccaaccaa
     2341 gtacggttgt taaacgaaac tgatccccaa gacctaacag cagaagcggt gtcagtgccc
     2401 aaaggaccag agttgggaca tagggcggaa caacttcggt tagccagagt gtgagacaga
     2461 tgcctgccac gatgagcgct cgttgcagta gcggttcttg aatccaaacc aaagatgaaa
     2521 taagacaagc cgcgattatg gcgagggcga gcaacggtcg gatgtgcggt ctggttgagg
     2581 tggattctac ggtccgagtc attgggccag attctttaag atcactcctg ccgcataggc
     2641 gaggcccgcg gcaatcgaac cgatggcgaa agttgtcagg ccggagctcc accacgatgc
     2701 cgtggaccaa cggcttttaa ccgaaccaat ggcgaagaag acaccgccgg tcatcacgat
     2761 tgagaagaca aacggattgt taaatccgaa caagaaggga atcaaaggaa ccaggccaca
     2821 agctaaaaaa gcgctgaacg tagagatcgc cgcaaaccag ggcgagcggg cttcaagcgg
     2881 cagaccgtat tcttccgaaa gcatggtacg cacccaacgc tgccgatcgg acgtgattag
     2941 ttccacgacg cgatccaggt ccgcacctga aaaacccttc cgcgcaaaaa tctgacgcac
     3001 ctcttcccgt tcaccctcgg gcgcgagttc gatgtgccgg tgttcgatcg cttcgaggcg
     3061 atgcatgtcg tcgtgttcgg ctttcgtgcc gagaaaatta ctcgccgcca ttgaaaaacc
     3121 gtcggcgaaa agatttgcga agccaatgat cagaatgacg acgagtgata gccgggcgcc
     3181 cacgaccccg ctcaccaccg cgaaagtggt gactgagccg tcgatgccgc cgtagatcca
     3241 atcgcgcaga tagttatggc gagggccagc cgccaaacgc tcttgaatgg cttcaatcga
     3301 atgttcgtgt tccacggttg aagggatcag gctaacgggt gtcagctaaa catgcgcagc
     3361 cattagtgct cgatgtttaa aaatcagcag actggcttct ccccgatggt caacaaactc
     3421 tattgcttca tcgcgtccat ctgtccccac ctgcggcgtc aagcgctcga cattggaaat
     3481 catatgagtt agatggcgcg tctcaatggc atcgtgtccg ccgagcatga tctgaacccg
     3541 tggcgcatca gcgcctttct cttccaggct gatgcctaca aggggaagtc cttgctcctc
     3601 cgtttgcgcg ccggcctcgc cgaatacctg cagccaggtt ggtcgagact tgttgcgctc
     3661 gttgaattga gtgagatacc gggcccagcc ttttcgttcg atattgtctt tcatgattct
     3721 cacctctcta aaacttcgct ttattcctct tgacgccggt gatgcggtcg agcaatgcga
     3781 aacacatccc tgtccttagc ggcgtcactc aaacgtttga ctcaaaaggg caacgcttat
     3841 gccaacggga ttggggttga tttagcgtgt gcgaatagaa aatcagagat cgcgtgcgag
     3901 ctttcgcgca tagatatgcg caactttgct cagactgggc gctgaactgg ccaattccga
     3961 aaccaaacct atcggcacat ccgttgcact ttcgtattca gcttccttga gaaacggagg
     4021 tcaacaatga gaagactacg atggttaacc gcggcgctgg tgcttacctt gctgctggcg
     4081 tcttccacca atgctcagga acaaagaata gtcacgcgca ccgattttgt gagcgtcaac
     4141 gtcatcgtca ccgacaagag tgggcgctac attcgtggct tgaagcgcgc cgatttcgaa
     4201 ttgtttgacg aaaaagtgaa acaggagatc gcgcacttct caagcgatcc cgcgtccgtt
     4261 tcgctcggca tcgtttacga ggtacatccc agaacatcag atcgaagatc cgcgatgctg
     4321 gcggcgttgc gacagttcac gagagacctg agcgagggag acgacttctt tttcatggct
     4381 ttcggcgcgc agggtagtgt gacgactggt ttcgtcccga ctgaggagca ggtactcaac
     4441 cacctcgcgg ccctgaggcc cggcggagcg tcgtctctct acgatgcgat ttacacggct
     4501 gcggaccagt tgcgtaagca acgaaatctg aaaaaggccc tgctgattat ttcagatgga
     4561 gacgatgacc agagcgctac gagctacaaa gcgttgcgcc atcgcctgcg tgagtttgat
     4621 gtgcaaattt acgcggtcgc gatagataat ccggcgaggg atcgaactgc cggttatagt
     4681 cgatggttct tcgaagacat cacgcgccaa accagagggc gggcgtttgt ggcaaatgct
     4741 gaaacttcag ttggccatgc ggtgctgtcg gaaatggcgc gcgtcagtgg cggttcggcc
     4801 tattatcctg aaactgaaaa cgaacccgaa cttaccggga tttgctcgca gatcgccacg
     4861 gagctgcgcc agcaatacac ggtcggcttt tatccgactg acgttgaatc aagcaaaacc
     4921 tggcatagga tcaagatcac cttgaaacca gcgagtggcc ggcgcgggtt gtcgctgtct
     4981 taccgtcagg gttacagact tatcggggaa aaataagctg tgagtctcgc cggggtggaa
     5041 cgcgcacatc cggagttttc aaccctcacc ggttcatagg atttgatcag gacaaagttc
     5101 aatgcgggtt tgcctcaaaa gtccgaaacg gcggaccttt cattcacacc gggcttcagc
     5161 ccggtgttgg gcacggcaaa aagttaggaa accgtttcaa cggtttctcc caaggacaga
     5221 tgacgtaact tggtcttatc gaacggcctc gtcggatccc gaggcgaaaa ccgttaaaac
     5281 ggttcttcgt cttatgtccc cgttccactc cgggctaaag cccggtgtga atgaaacatc
     5341 agagtctcta gcgtttgaga caaaactgct caccgggtta ttggaaggtg aagcgaaaag
     5401 gttgagcctt cacctactgt agaattcact tccacacggc ccccatgcgc gcgagcgatt
     5461 cggcgcacag caggaagtcc aagcccggtg ccgctagtcc gcgtggtgaa gaaggggttg
     5521 aagatgcggg cgagatcttc ttcaccaatg ccgcgtccat tgtccgagac ttcgactatc
     5581 gcttcatcct caaattcttc ggaccgctca ttcttggatc gcgccacctg aatcttaacc
     5641 gtaccataat caccaaccgc ctcgatggca ttgataatca gattgagcac ggcgtcttca
     5701 atctgagctg gatcgatcca gatggttatt ggatctcccg ggggctgaaa ctcgatgcca
     5761 acgtttcggc cggacgtggt tatattcgcc aactgcgcgc gggccaaatt gatcgcgcgt
     5821 accacgatgt ccgagagtga acttgctctc actgagatca gtcgcggccg cgcgcgatcc
     5881 agcagcgccc gcacagtact atcgatcctt tcgacctcat gacggactcc ttccaatgct
     5941 tcgcgctcag gatcattctt atcgcggcga cgaataagta tgtctaccac gccttgaatg
     6001 cctgccagtg gatttttgat ttcatgggcg aggccggcgg caagctcacc cacaaaagat
     6061 agctgtgcgg cgcgttgcaa ttcggctgcc tgctgaagaa cctgctcttc cgctactttg
     6121 cgttgcgtaa tgtcatgcct gatggcgacg tactggtagg gcttgccttc cgaattgaga
     6181 aacggaacga tagtcgtatc gacccaataa atactgccgt ccttcgccag atttctgagt
     6241 tcccccttcc agacctttcc cgatgcgatg gtcgtccaca gatcgcggat gaactctttt
     6301 gagtgataac cggagttaat gaggcgatga tcctggccta acaattcctc acgtgaatat
     6361 ttcgagatac ggcaaaactg atcattgaca aagttaatga ttcccgtctg atcggtaatc
     6421 gccacgatcg ttgactgatc aagggcaaac ttgatgtcag caagttcttt gagcgaacgc
     6481 tcta
//
LOCUS       DATDBY010000578         2412 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_261320, whole genome shotgun sequence.
ACCESSION   DATDBY010000578 DATDBY010000000
VERSION     DATDBY010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261320"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..885)
                     /locus_tag="VIT19_10875"
     CDS             complement(<1..885)
                     /locus_tag="VIT19_10875"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5839528.1"
                     /translation="MRIAIITPSITAGDAVSNDVLGMHDALRDVVEVRIFAETSTLNS
                     PQIESVRKLNGFLAHPLDTLIYHCAGEWAPAKQLLKTKCRRVIKYHNITPPHFLDPYC
                     ADFAAHCDDGRQQLGLIARSDCDLFLSDSKYNMYELIAAGADESKSFVVPPFHHVERL
                     EKAGNGGPDVPGLVNEDFNVCTVGRIVPNKGHADLIAAFAIYHHDYNPHSKLLLIGKQ
                     EARLIRYTVMLHGVIRRLKLEHAVTFADNVSDRELKAYYDAADVFAITSEHEGFCVPL
                     VEAMAMRVPIVAYASTAVT"
     gene            complement(921..1412)
                     /locus_tag="VIT19_10880"
     CDS             complement(921..1412)
                     /locus_tag="VIT19_10880"
                     /inference="COORDINATES: protein motif:HMM:NF025314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4214 domain-containing protein"
                     /protein_id="HEY5839529.1"
                     /translation="MVQPANNLEYYVKQIRLAAGKREKTSTTEAVAEVIASIHAGKTL
                     QLMLDGTESLDDFARTALVLSLTPASIDMRRGRYQLHELLQYDDHEFIWNAYRALLKR
                     APDETGFKGFLERLRSGQRSKIDVLASIRYSSEGRRKHVSIEGLLRKALVSKAARLVH
                     SRR"
     gene            complement(1429..>2412)
                     /locus_tag="VIT19_10885"
     CDS             complement(1429..>2412)
                     /locus_tag="VIT19_10885"
                     /inference="COORDINATES: protein motif:HMM:NF025877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Wzt carbohydrate-binding domain-containing
                     protein"
                     /protein_id="HEY5839530.1"
                     /translation="FMNASLMGFSRAQTEALLPEIERFAEIGDFIHQPVKTYSSGMYV
                     RLAFSIAISAAPEILIVDEALAVGDAIFQHRCTRRLNEMQEAGVTVLFVSHDPAAVRA
                     LCSRAILLSEGRMEAEGHPQDVLNRYQKIIMARENKYESAVSAAHDVAVSVEEQSAEE
                     TAPLSYTFRHGDGTAEVLRVDLLNQADQPVKLVESGEAVRVRMRVRFHAEIDDPVCGF
                     LIRNRHGINIYGTNTQIQQVEVGPVQPEDIVEVTFAMNCSLAPDSYSIAVAAHSPAAV
                     SFDWIDGVVFFHVMSAVAMEGVANLQATVTARKLAQPASARANAEHRAIAG"
BASE COUNT          505 a          704 c          663 g          540 t
ORIGIN      
        1 agtgaccgcc gtagaagcgt acgccacaat cggtacgcgc atcgccatcg cttcgaccaa
       61 aggaacacaa aagccctcgt gttcgctggt gatcgcaaaa acatcagccg cgtcgtaata
      121 agctttgagc tcccgatccg agacattgtc ggcaaaagta actgcgtgtt cgagcttcaa
      181 gcgcctgatc acgccgtgca acatgaccgt atatctgatt aggcgcgctt cctgtttgcc
      241 gataagcagc agcttgctgt gcggattata gtcgtgatga taaatcgcga acgccgcgat
      301 taggtcggca tgtcccttgt tcggcacaat ccggcccacc gtacaaacat taaaatcttc
      361 attcaccagt cccgggacat ccggcccgcc gttccccgcc ttttccagtc gctcgacgtg
      421 gtggaacggc gggacgacga aactcttcga ctcatctgcg ccagcggcga tcaattcgta
      481 catgttgtac ttcgaatccg agagaaagag atcgcaatcc gatcgggcaa ttaagcctag
      541 ttgctgtcgg ccgtcgtcac agtgcgccgc gaaatctgca caataaggat cgagaaaatg
      601 cggcggcgta atgttgtgat atttgatgac tcttctgcac ttcgtcttca gtaactgttt
      661 ggccggcgcc cattcgccgg cgcagtgata gatcaatgtg tcgagcgggt gcgcgagaaa
      721 gccattcagc ttcctgactg attcaatctg cggcgagttg agcgtggaag tttcagcaaa
      781 gatgcgcacc tcaaccacat cgcgaagtgc gtcgtgcatt ccgagtacgt cgttgctaac
      841 tgcgtcgccg gcggtgatgc tgggcgtgat gatggcgatg cgcacggcgt tatgactcca
      901 ggggattgaa tgctgcgcgt ctagcgccgc gagtggacca accgggccgc tttgctcacc
      961 agggcctttc tgagcagccc ctcgatgctg acgtgctttc gcctgccttc agaggaataa
     1021 cgaatgctgg cgagaacgtc tattttcgat cgctggccgc tgcgcaatct ttcgagaaag
     1081 cctttgaaac cagtctcgtc gggcgcgcgc ttcagcagcg cccggtacgc attccagata
     1141 aactcgtgat catcgtactg aagaagttcg tgaagctgat agcggccgcg cctcatgtcg
     1201 attgatgccg gtgtgagact aagcaccagg gccgtgcgag cgaagtcgtc taagctctcc
     1261 gtcccgtcca gcatcaactg aagcgtcttg ccggcatgga tcgaggcaat tacctctgcg
     1321 acagcctccg tcgtcgaggt cttttctctc tttccagccg ccagccgaat ttgttttacg
     1381 tagtactcga ggttatttgc aggctgcacc atttcgactc cgcatctatt aaccggcaat
     1441 ggcgcggtgc tcggcattcg cgcgcgcact tgccggttga gcgagtttcc gcgccgtaac
     1501 ggtggcctgt aaattagcga ctccttccat cgcgaccgca ctcatcacgt gaaaaaatac
     1561 gacgccgtca atccagtcga aactaactgc ggcgggactg tgagctgcga ccgcaatcga
     1621 atacgagtcg ggtgcgagtg aacagttcat ggcgaaggtt acttccacga tgtcttccgg
     1681 ctggacgggg ccaacttcaa cctgctggat ctgtgtgttt gtcccgtaga tgttgattcc
     1741 gtgccggttc cggatcagga acccgcagac cggatcgtca atctcagcat gaaaacgaac
     1801 tcgcatgcgg acgcgcaccg cttcgccgct ctcaaccagc ttcactggtt gatctgcctg
     1861 gttcagcagg tccacgcgca acacttcggc agtgccatca ccgtgacgaa acgtgtagct
     1921 aaggggcgct gtttcttccg cggattgttc ttcgacactg acagcgacgt cgtgcgcggc
     1981 cgaaacggcg ctctcgtact tgttctcgcg cgccatgatg attttctgat agcggttgag
     2041 cacgtcttgc ggatggcctt cagcttccat tcgcccctcg ctcaagagaa tcgcccgcga
     2101 gcaaagcgcg cggactgcgg ccggatcgtg cgagacgaag aggacagtca ctccggcttc
     2161 ctgcatctcg ttcagtcgtc tggtgcaccg gtgctgaaaa atcgcatcac cgacggccaa
     2221 cgcttcatcc acgatcaaga tctccggcgc agcgctgatg gcgatcgaaa acgccagccg
     2281 cacgtacatg ccgctcgaat aagttttgac cggctgatga atgaagtcgc cgatttccgc
     2341 aaagcgctcg atttccggca acagcgcttc ggtctgcgct cgcgagaatc ccatcagcga
     2401 cgcgttcatg aa
//
LOCUS       DATDBY010000579         2493 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2037976, whole genome shotgun sequence.
ACCESSION   DATDBY010000579 DATDBY010000000
VERSION     DATDBY010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2493
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2037976"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1356
                     /locus_tag="VIT19_10890"
     CDS             <1..1356
                     /locus_tag="VIT19_10890"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-ribosomal peptide synthetase"
                     /protein_id="HEY5839531.1"
                     /translation="IDEYKITAEDRVLQFASLSFDTSAEEIYGALASGATLVLRADAM
                     ITSPKQFLESCAELGITVLDLPTGYWHHLVNAIVEDDLQVPGSIRLVILGGEQAHVDH
                     VGKWLAHAGRNARLVNTYGPTEATVVTTTCDLTEHRDGAPVAIGRPIAGASVYVLDDA
                     LQPSPVGIPGELYIGGAGVARGYLNRPDLSAARFIPNPFAEGRLYRSGDLVRYRPCGN
                     LEFLGRADNQVKIRGFRIELEEIEEAIRSHDAVTDAVVKVIEDSDGDKRLCAYVVFEG
                     QSASDINDLRSFLKGKLPPHMVPGIFTMLDSLPLTANGKVDRRALPDPKPAEQPAEGF
                     VGPRTPTEELVAAAWCQALKLPRVGMNDSFFELGGHSLLAAKVFAELQRTVTVELNLV
                     DIFKAPTVAGLANLIYEREAQHQESDELMSLLAELDDLSDEEAHQQMTEERATLSPAR
                     L"
     gene            1487..>2493
                     /locus_tag="VIT19_10895"
     CDS             1487..>2493
                     /locus_tag="VIT19_10895"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HEY5839532.1"
                     /translation="MGEPAKQTDLKQQLAALSPAKRALLELKLMKRNGSRKAADETIP
                     RRAERGAAPLSQNQQGLWVLSQLMPDSFLYQIPKALRLTGNLNIEALRHTLDAIVCRH
                     ESLRTIFKTVDGVPMQVVVDHVRLDLPLIDLSAMPEAEREEEARHLLALEGRRPFNLS
                     EGPLIRCHLLRLAESEHILLMTTHHIVTDGWSMGIFHRELMELYEAFAMGRPSPLPEL
                     PIQYTDYAVWHRRWFEGDVYESQLAYWKKQFATPPPVLEVPTDHPRSSFQAYRAYRGI
                     QQTLALSPELTRKINEFCRKEEATPFMTLLAAFKVLLHRYTGEEDIVVGSPIAGRCMA
                     ET"
BASE COUNT          541 a          709 c          728 g          515 t
ORIGIN      
        1 atcgatgaat acaagatcac cgcggaagat cgcgtgctgc aattcgcctc gctcagcttc
       61 gatacaagtg cggaagagat ttacggcgcg ttagctagcg gcgccaccct ggtgttgcgc
      121 gctgacgcga tgattacttc acccaagcag ttcctggaaa gctgcgcgga actcggtatc
      181 accgtgctgg atctgccgac gggctattgg caccatctgg tcaacgcgat cgtcgaagac
      241 gatttgcagg tccccggttc gattcggctg gtaatcctcg gcggcgaaca agcgcacgtc
      301 gatcatgtcg ggaagtggct cgcgcatgcg ggacgaaatg cgcggctggt gaatacttac
      361 ggtccaactg aagcgactgt ggtgacgacg acatgcgatt tgacagagca tcgtgacggc
      421 gcgccggtag caattggccg tccgatagcc ggagcttcgg tctacgtttt ggatgacgcg
      481 ctgcagccgt caccggttgg gattcccgga gagctttaca tcggcggggc gggcgtcgcg
      541 cgtggctacc tgaatcggcc ggaccttagc gccgcaaggt tcatcccgaa tccgttcgca
      601 gaagggcggc tttatcgttc aggggattta gttcgttatc ggccctgtgg caacctcgaa
      661 tttctcggcc gcgcggacaa tcaggtgaag attcgcggct tccgcatcga acttgaagag
      721 attgaagaag ccattcgttc acatgacgcg gtcactgatg cagtcgtcaa agtcatcgaa
      781 gattctgacg gcgacaagcg tctgtgcgcc tacgttgtgt tcgagggaca gagcgcgtcc
      841 gacatcaacg atctgcgaag cttcctcaaa ggcaagttac cgccacacat ggtgccggga
      901 attttcacaa tgctcgacag tctgcctctg acggcgaacg gcaaagttga tcgccgcgcc
      961 ttgccagatc ccaaacccgc tgagcaacct gccgaaggct ttgttggtcc gcggacgcca
     1021 accgaagagc tggtcgcggc ggcatggtgt caggcgctga agcttccgcg cgtcggcatg
     1081 aacgacagct ttttcgaact tggcggccac tcacttctgg cggcgaaggt attcgccgag
     1141 ctgcaaagga ctgtcacggt cgagctaaac ctcgtcgata tcttcaaggc gccgacggtt
     1201 gccggcctgg caaatttgat ttacgaacgc gaagcccagc atcaggagag cgatgaactc
     1261 atgtcgctgc tcgccgaact ggacgatttg tccgatgaag aagcccatca gcagatgacg
     1321 gaagaacgcg ccacgctttc tcctgcccgg ttgtaactga aacgaagtag ccctgacccg
     1381 tcagggaggg gcgtggctcg aaaaacctcc aaactgcccc aactcgtcgt tttcttagga
     1441 aaactggcga catttccact ttctattacc tgtacgaggg gtccgtatgg gagagccagc
     1501 caaacaaacc gatctaaaac aacaactcgc cgccctgtcg cctgcgaagc gcgcgctgct
     1561 cgagttaaag ctcatgaaac ggaacggcag ccgcaaagct gctgacgaaa caattccgcg
     1621 ccgggccgag cgcggggcag cgccactgtc acagaatcaa caggggcttt gggtcctgag
     1681 ccaactaatg ccggactcgt tcctgtatca gattccgaag gcgctgcggc tcaccggcaa
     1741 tctcaacatc gaagcgctcc ggcacacgct cgacgcgatc gtttgtcgac acgaatctct
     1801 gcgcacaatt ttcaagacgg ttgacggcgt cccgatgcaa gtggtcgtgg accatgttcg
     1861 gctcgacctg ccgctgatcg atctcagcgc gatgcccgaa gcagaacggg aagaagaagc
     1921 gcgtcacctt ctcgctttag aaggacgacg tcctttcaat ctcagcgaag gtccactgat
     1981 tcgctgtcac ctgctgcgcc tggcagaatc agaacacatt ctgctgatga cgacacatca
     2041 catcgtgacc gatggatggt cgatgggaat ctttcatcgc gagttgatgg agttgtacga
     2101 ggcgtttgcg atgggccggc cttcgccgct gcctgaactt ccgattcaat acacggacta
     2161 cgcagtctgg catcggcggt ggtttgaagg cgacgtttat gagtcgcagc tcgcatattg
     2221 gaagaagcag ttcgcgacgc cgccaccggt gcttgaagtg ccgacggatc atccgcgctc
     2281 aagttttcag gcctatcgcg cttaccgtgg aattcagcag acgctcgcgc ttagccctga
     2341 gctgacgcgg aagatcaatg aattctgtcg caaggaagaa gctacgcctt tcatgacgct
     2401 gctcgcagcg ttcaaggttt tgctgcatcg ctacacgggc gaggaagaca tcgtagtcgg
     2461 ttctccgatc gccggccgct gcatggctga gac
//
LOCUS       DATDBY010000580         3371 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2517181, whole genome shotgun sequence.
ACCESSION   DATDBY010000580 DATDBY010000000
VERSION     DATDBY010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3371
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2517181"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="VIT19_10900"
     CDS             <1..412
                     /locus_tag="VIT19_10900"
                     /inference="COORDINATES: protein motif:HMM:NF040055.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839533.1"
                     /translation="ASVMVIEHAERFGLSQLHQLRGRVGRGAEQSYCVLLASDKQTEV
                     ARERLGIMEETNDGFKIAEKDLEIRGPGEIMGTRQAGLPEFRVANLVRDLEILQAARK
                     EADYYANQRSSSREAVQLLKQVQEDARLKLAAVG"
     gene            538..1101
                     /gene="rsmD"
                     /locus_tag="VIT19_10905"
     CDS             538..1101
                     /gene="rsmD"
                     /locus_tag="VIT19_10905"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: protein motif:HMM:TIGR00095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEY5839534.1"
                     /translation="MRIIAGKYRGRQLKSPPSAQTRPTSDRLRETLFNVLAPRIEGVR
                     FLDLCAGTGAVGIEALSRGAEHVTFVDKSRKMCGLIEANTTALGIDKKEFEIVNADAS
                     AYLRRHAKKEREPFDIIFFDPPYAEDYEPVLTLMAEHAAQLMCEKTVVVVEHYKKKVL
                     AEKFGLLKPYRTLKQGDSALTFYKSAA"
     gene            1383..2456
                     /gene="tsaD"
                     /locus_tag="VIT19_10910"
     CDS             1383..2456
                     /gene="tsaD"
                     /locus_tag="VIT19_10910"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEY5839535.1"
                     /translation="MLVLGIETSCDETAAAVIRDGREIVSSVIASQIKTHEKFGGVVP
                     ELASREHLDKIVPIVEEALSRANVTRQQLDGIAVTNGPGLIGSLLVGVSYAKAMAYAL
                     NKPLVGVNHIEGHIYSVCFENPPVEYPALALIVSGGHTNVFFVPEPGKYKVVGRTRDD
                     AAGEAFDKVAKLLGLGYPGGPVIERLAREGNPKAVKFAIPRMGDNRPDFSFSGLKTAV
                     QKYVRESGLQPVSNGGEPSQGIKDLAASFQSTVIRSLVSTMERVAEEYRPRTLIVAGG
                     VACNRALREACSDAAGRLGVPVYFPSPHLSTDNAAMIAAAGTVKLESGERAGWDLNAD
                     VMMRLQNIEVEDAELRKRVRYRL"
     gene            complement(2548..3009)
                     /locus_tag="VIT19_10915"
     CDS             complement(2548..3009)
                     /locus_tag="VIT19_10915"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HEY5839536.1"
                     /translation="MFEGKVISINITPQAEAPMQSVEEVRAIPGRGLEGDRYFDNKGR
                     APEVKRELTLIEAEAIEAFKSEMGVDYRLGDSRRNLVTRGVPLNHLVGKDFWVGEVKA
                     RGVMLCEPCAHLQKLTVKQVLPGLVHRAGLRAQILTEGTIRVGATVSEVQP"
     gene            complement(3161..>3371)
                     /locus_tag="VIT19_10920"
     CDS             complement(3161..>3371)
                     /locus_tag="VIT19_10920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY5839537.1"
                     /translation="LGVEFVKDKTSRTPDPELRDRVEMAVFERGLILLGCGANTIRWS
                     PPLILTKEHVDVALEIFDDAIKASI"
BASE COUNT          754 a          907 c          984 g          726 t
ORIGIN      
        1 cgcatcagta atggtgatcg agcatgcgga gcgcttcggc ttgtcgcagc ttcatcaatt
       61 gcgcggtcgt gtcggtcgcg gagcggaaca gagttactgc gtgctgctgg cttcagacaa
      121 acaaactgaa gtcgcgcgtg aacggctcgg catcatggaa gagaccaacg acgggttcaa
      181 aatcgccgag aaggatttag agattcgcgg ccccggcgaa atcatgggca cgcgccaggc
      241 gggtttgcct gagttccgcg tcgcgaacct ggtgcgcgat ctggagattc tgcaagccgc
      301 gcgtaaagag gctgattact acgcgaacca acgtagctct tcacgcgaag ctgttcagtt
      361 gttgaagcaa gtccaggaag atgcgcggtt gaagctggcg gcggttggct aagttacaga
      421 accgcgagcg gtagcgagcg ggatcaaagc tcaatttgcg attcaataat tagtctttcg
      481 tggcgcaaac ttgcgccctt aacccgctcg ctaccgctcg cggttctgta atttcttatg
      541 cggatcattg ccgggaaata tcgaggtcgc cagttaaaga gtccgccgtc tgcgcagacg
      601 cggccaacgt cggatcgtct gcgcgagact ctgttcaatg tgctggcgcc gcgaattgaa
      661 ggtgtgcggt ttcttgacct gtgcgccggg accggtgcgg tcggaattga agcgttatcg
      721 cgtggggctg aacacgtgac gttcgtcgat aagtcacgaa aaatgtgtgg gttgattgaa
      781 gcgaacacca ccgccctcgg catcgacaag aaggagttcg aaattgtaaa tgcggacgcg
      841 tccgcttacc tgcggcgcca cgcgaagaag gaacgagagc cgtttgacat tatatttttc
      901 gatccgcctt atgcggagga ttacgagccg gtgctcaccc tgatggccga acacgcggcg
      961 cagttgatgt gcgagaaaac agtagtggtc gtagagcatt acaagaaaaa agtactagct
     1021 gaaaagtttg gacttctaaa accttaccgc actctgaagc aaggggactc ggcgctgacc
     1081 ttttacaagt cagccgcgta gcggcgaaat gtttatagcc acagtcgcga aaggccccca
     1141 agctccggac gagcgcaata aatctgtcgc ccataaatgg gctcatcaaa ttcacacgcc
     1201 ctcatgttct ataaatattt cgttcctgac ggaacgaaga aggtacactc gttcatcctc
     1261 gcagattgct gagcaagccg ctgagcgtta tcttttcaac tgacaactga caactgacaa
     1321 ctgacaactg accactgaca actgaccact gacaactgac aactgactac tgacaatcga
     1381 agatgctagt tctcggaatt gaaacctcat gcgatgaaac tgccgcggcc gtaatccgcg
     1441 acggccgcga gattgtctcc tcggtaattg cctcgcaaat caaaactcac gagaaatttg
     1501 gcggagtcgt gccggaattg gcttcgcgcg aacacctcga caaaatcgtg ccgattgttg
     1561 aagaagcgtt gtcgcgcgcg aacgtgacgc gccaacagct cgacggaatc gcggtgacga
     1621 acgggcccgg gttgatcggg tcgctgctcg ttggtgtctc gtacgcgaag gcgatggctt
     1681 acgcgctgaa caagcctctg gtcggcgtga atcacatcga aggacacatc tactcggtct
     1741 gtttcgaaaa ccctccggtg gagtatccag cgttggcgct aatcgtttcc ggtgggcaca
     1801 cgaatgtttt cttcgtgcct gaacccggga agtacaaagt cgtcggtcgc acccgcgacg
     1861 atgccgccgg cgaagcgttc gacaaggtgg cgaagctgct cgggctcggt tatcccgggg
     1921 gccccgtcat cgaacggctg gcgagagaag ggaatccaaa agcggtgaag ttcgcgattc
     1981 cgcggatggg cgacaatcgt ccggatttta gcttcagcgg attgaagacg gcggtgcaaa
     2041 agtacgtgcg tgaatcggga ctgcaacccg tgagcaacgg cggcgaacct tcacagggaa
     2101 tcaaagatct cgcggcgagt tttcaaagca cggtgattcg gtcactggtt tcgacgatgg
     2161 agagagtggc ggaagaatat cggcccagaa ctctgattgt tgccggtggc gtggcgtgca
     2221 atcgggcttt gcgcgaagcg tgcagtgacg ccgctggccg attgggagtg cccgtctact
     2281 ttccttcgcc gcacctttcg accgacaacg cggcaatgat cgcggcggcc gggacggtaa
     2341 aactggaatc cggcgaacgc gccggttggg atttgaatgc cgacgtgatg atgcggcttc
     2401 agaatatcga agtggaagat gccgagttgc ggaagcgggt taggtatcga ttgtaagtgt
     2461 cagtggtcag tggtcagtta catttgttcg gttcgcgacg tatcgtcgtt acttcaactg
     2521 acaactgact acggaccact gacgggctta cggttgcacc tctgaaacag ttgcgccgac
     2581 gcgaatagtg ccttccgtca aaatctgcgc gcgcaagccg gcgcgatgaa ccagtcccgg
     2641 cagaacctgt ttgacggtaa gcttttgcag atgtgcgcac ggctcgcaca gcatgacgcc
     2701 acgcgctttt acttcgccga cccagaagtc tttcccgacc aggtggttta gcggcacacc
     2761 gcgcgtcacc aggttgcggc ggctatcgcc taaacgataa tcgacaccca tttcgctctt
     2821 gaacgcttca atggcttcag cctctatcag cgtcaattcg cgcttaactt ccggcgcgcg
     2881 ccctttgttg tcgaagtagc gatcgccttc aaggccgcgc cccgggattg cacgcacttc
     2941 ttccacggat tgcatcggtg cttccgcctg cggtgtgatg ttgattgaga ttactttgcc
     3001 ttcaaacata ttctcctcat gtggagtgcg ccggcagagc gtagagtcga cggcgctttg
     3061 gattatccat catgaaacag atccaaagcg gtgtcgcgct acgaccaccc cagcgcggtt
     3121 gccgcgccgg ggaccccggt gcttgccacc gcactccaaa ttagatcgac gccttgatag
     3181 cgtcgtcaaa aatctcgagc gccacgtcaa cgtgctcttt cgttaagatc aagggcggcg
     3241 accagcgaat cgtgttggct ccgcagccca gcagaatcaa tccgcgttcg aacacggcca
     3301 tttcaacacg gtcgcgtagt tccggatcgg gtgtgcggct ggtcttgtct ttcacaaatt
     3361 cgacgccgag c
//
LOCUS       DATDBY010000581         3918 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_97125, whole genome shotgun sequence.
ACCESSION   DATDBY010000581 DATDBY010000000
VERSION     DATDBY010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3918
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97125"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..639)
                     /locus_tag="VIT19_10925"
     CDS             complement(<1..639)
                     /locus_tag="VIT19_10925"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5839538.1"
                     /translation="MRSYKRLFATLALLFCFGISALPQNQPRSGTTPQPTEGQGVVVL
                     KAARLIDGTGAPAINNAIVIVTDNRITAVGDARSVRVPSGAKVIDLGNATLLPGFIDA
                     HTHLIGRVLGDPDGENAAVRDYAAFGAILGVNHARETLMAGFTSVRNVGASGPFNDVA
                     LRKAIDEGWVPGPRMQTAGHSLGITGGHCDTNGYRPGIFDRGIEDGIANGPDE"
     gene            complement(762..2525)
                     /locus_tag="VIT19_10930"
     CDS             complement(762..2525)
                     /locus_tag="VIT19_10930"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY5839539.1"
                     /translation="MSERSFGNRLTMQSGVARRVAIHLSTLLFCLSAFTSAGAATLPP
                     GFVETQISGLSNPTAMEIAPDGRLFVCQQGGSLRVIKNGALLPTPFLTLSVNSSGERG
                     LLGIAFDPNFASNNFLYLYYTVPGSPPHNRVSRFTANGDVVVAGSELPILDLENLSAT
                     NHNGGAIHFGPDGKLYVATGENAVPSNAQTLANRLGKILRINTDGSIPSDNPFFNTAQ
                     GVNRSIWALGLRNPFTFAFQPGTGRVFLNDVGQSAWEEINDGIAGSNYGWPTTEGPTS
                     NPSFRAPLFSYNHTIGPTGGCAIAGGVFYNPATNQFPATYTGKYFFADLCSGWIRLFN
                     PADNTASAFASGISNPVDLKVAADGSLYYLARGSSAVFRVQYTAASPNITTHPANQTV
                     LTGQPVTFNVSATGTAPLSYQWQRNMTNIGGATSSSYTISSASTADNGAKFRCVVTNA
                     FGFATSNEATLTVQPPPPIIETEPNSDRAVALTLPMAVRDPFPLLDPFNLSSDNRTRV
                     MFFVRNLAFVPGDDLTARAEDAGMFVHQLTIEFVGTVPDFTGFTQVIVILPNNLPPGQ
                     DVLLSVTWHTQTSNKARIRIR"
     gene            complement(2745..3572)
                     /locus_tag="VIT19_10935"
     CDS             complement(2745..3572)
                     /locus_tag="VIT19_10935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839540.1"
                     /translation="MRNHLILKFVVTFFVLVFCLGFARPTLAQGGKAEPLRVQFPRGK
                     TSATLKGTIRRDQQFEYAVEARAGQWMLIEIKSAPQDSAIFLVKDPDGKDESYHYYWS
                     GTLKQTGEYVVFVTKPADFRVARFSLTITIENAPSNRASTPPAALSAAMRKLIRAMRT
                     RNTSLFLSLFSRTRPFFHLNPMNVGSKKHFRNSISYATLTRDVQKKGDLYWLLIERAD
                     NGDFDAFVDNFPDNTMWTSVTGNKFVPRGEHLTSHTYVRWRREGDRWVIAEISYATA"
BASE COUNT          860 a         1072 c         1125 g          861 t
ORIGIN      
        1 ttcgtccggg ccgttcgcga tgccgtcctc aatcccccgg tcgaaaatgc ccggccggta
       61 gccgttggta tcgcaatggc cgcccgtgat cccgagcgag tgaccggcgg tttgcatgcg
      121 cggaccggga acccagccct cgtcgatcgc tttgcgcaga gcgacgtcgt tgaaaggtcc
      181 cgaagcgccc acgttgcgca cactggtgaa gccggccatc aacgtctcgc gcgcgtggtt
      241 cacaccgagg attgctccga aggctgcgta gtctctgacc gcggcgtttt cgccatccgg
      301 atcgccgagc actcgtccaa tcagatgtgt atgcgcatcg atgaatcccg gcagcaacgt
      361 cgcgttaccg agatcgatca ccttcgcacc ggacggtacc cgcacggatc gcgcgtcgcc
      421 gaccgcggta atcctgttat cggtgacgat gacgattgcg ttgttgatcg cgggcgcgcc
      481 ggttccgtca atcaggcgag cggccttcag cacgaccacg ccctggcctt cggtcggttg
      541 cggcgtggtt ccggagcgag gctgattctg cggcagcgcg gaaataccga agcagaaaag
      601 caaagccagc gtggcaaaca gacgtttgta gcttctcact gaagggctcc tcgtttgtga
      661 ttcgatgccg gcaagtcagc aacatgttag cgagcggcgg cattctagtt gagatttgag
      721 ttgagcgaaa gaggcgaggc aggtgtcaac gaatctgctc gtcatctgat tcggatgcgt
      781 gccttgttgc tggtttgagt gtgccaagtc acgcttaaca gcacatcctg tcccgggggg
      841 agattattcg gcaatatgac aatcacttgc gtgaacccgg taaagtcagg aaccgtgccc
      901 acaaactcaa tcgtgagctg atgaacaaac attccggcgt cttccgcgcg cgcggttaga
      961 tcatcgcccg gcacgaaggc gagatttctc acgaaaaaca tcactcttgt ccgattgtcc
     1021 gagcttagat tgaacggatc caggagcgga aacggatcac gcacggccat cggtagagtc
     1081 aaagcaacgg cacggtcgct gtttggttcg gtttctataa tcggcggcgg cggttgcacg
     1141 gtgagcgtcg cttcattgct ggtcgcgaat ccaaacgcgt tggtgacaac gcagcgaaac
     1201 tttgcgccgt tgtcagccgt gctcgctgat gaaatcgtgt aagacgacga ggttgcgccg
     1261 ccgatgttgg tcatgtttcg ttgccattga taactgagcg gcgcagtacc tgtcgcggac
     1321 acgttaaagg tgaccggttg cccggtcagg acggtttgat ttgccggatg tgtagtgatg
     1381 tttggagatg ccgctgtgta ctgaacccgg aatacggctg acgatccgcg cgcgaggtaa
     1441 tacagactcc cgtcagctgc gactttcagg tcaaccggat ttgagatgcc ggacgcgaat
     1501 gcgctggcag tattgtcggc cggattgaac aggcgaatcc aaccgctgca caggtcggca
     1561 aaaaagtatt tgcccgtgta agtcgccggg aattgattag ttgccgggtt gtaaaagact
     1621 ccaccggcaa ttgcgcatcc gccggtaggt ccgatcgtgt gattgtacga gaacagcggc
     1681 gcacgaaaac tgggattcga agtcggcccc tcagtggtgg gccagccata gttcgaacca
     1741 gcgatgccgt cgtttatctc ttcccacgcg ctttgaccca cgtcgttcag gaacacccgg
     1801 ccggtaccag gttggaaagc gaaagtgaac gggttgcgca gaccaagcgc ccaaatcgat
     1861 cggtttactc cctgggcggt gttaaagaac ggattgtcac tgggaatcga accgtccgtg
     1921 ttgatacgca ggatcttgcc aagacgattg gcaagcgttt gcgcgtttga cggcaccgca
     1981 ttctcgcccg tggccacgta gagttttccg tccggtccga agtgaatcgc gccaccgttg
     2041 tgattagtcg cgcttaagtt ctccaaatcc agaatcggca actcgcttcc ggcgacgacc
     2101 acatcgccat ttgccgtaaa gcggctgacg cgattgtgtg gcggcgaacc cggaaccgtg
     2161 tagtagagat acagaaaatt attgctggcg aagttcggat cgaaagcaat ccccagcagt
     2221 ccacgttcgc ctgacgaatt caccgacaag gtaaggaacg gcgtcggcag aagcgcgccg
     2281 ttttttatca cgcgcaagct gccgccttgc tggcacacaa acagccggcc gtcaggcgcg
     2341 atttccatag cggtcgggtt tgagagaccg cttatctgag tttccacgaa acccgggggc
     2401 agtgttgccg cgcccgcaga tgtgaacgca cttaggcaaa aaagcagcgt cgacaaatgg
     2461 atcgccactc gacgggcgac gccgctctgc atcgttagtc tgtttccaaa ggatcgctcg
     2521 ctcattcgta cgtgttattc ccggcgcgca cgcggaccat tccgggcgca ctgctgcatc
     2581 tttgacgaag ggcaagcgtg aagttgatta agagacaacc cgaggggcga gtctggggtt
     2641 taggttgtcc tttcgaattc tgaggggccg aagccgatta tacgctccgt aactggcggc
     2701 tgccaaaatc aaattgcccg atcggcctgg atgcaggtcg ctagtcacgc cgtcgcgtaa
     2761 cttatttcag cgatcaccca gcggtcgcct tcgcggcgcc agcgaacata ggtatggctg
     2821 gtaaggtgct cgccgcgagg cacaaactta tttcccgtaa cgctggtcca cattgtgttg
     2881 tcgggaaagt tatccacaaa tgcatcgaag tccccgttat cggcgcgctc gatcaatagc
     2941 caataaagat cgcctttctt ctgcacatcc cttgttaatg tcgcgtagct aatcgagttg
     3001 cgaaaatgtt tctttgatcc tacgttcatc ggattcaagt gaaaaaacgg tcgcgtgcgc
     3061 gaaaacagag aaagaaataa agacgtgtta cgagtgcgca ttgcgcggat aagttttcgc
     3121 atcgccgccg aaagcgcggc cggcggggtc gaagcgcggt tgctgggcgc attctcaatt
     3181 gtaatcgtga gcgaaaaacg tgcgacccgg aaatcggccg gcttcgtcac gaagactaca
     3241 tattccccgg tctgttttag cgtgccggac cagtagtagt gatacgactc atccttaccg
     3301 tcagggtctt tgacgaggaa tattgctgag tcctgcgggg ccgatttgat ttcgatcagc
     3361 atccattggc cggcccgggc ttccaccgcg tactcgaatt gttgatcgcg gcgtatcgta
     3421 cccttcaaag tcgcactggt tttgccgcgg ggaaattgca cgcggagcgg ctcggctttt
     3481 ccaccctgag caagagtcgg ccgcgcaaag cctaagcaaa acaccagaac aaagaacgtc
     3541 accacgaatt tgagaattag atggttcctc attaacggcg catcatacag ccaattagcg
     3601 cactccagct taaaactaat tgtaatcgcg gtagtttcct attttggttt ttctttgcgg
     3661 ctttgcgcga gtaaccaatt tcccccgcgt cgtttcacgc aaagacgcaa atcacgcaaa
     3721 ccaaacaggc gcttactata tttcgccttg gccgtttgca ttggctgcgg ctaaagtaaa
     3781 gtcctgactc aaccatgggc gtagccaagt taaccgatca aaatactgtc gttcccgaaa
     3841 gcaaatacgc gcgtgtagag cgcgagcggc gctatctgtt gaacgacttg ccggaaggct
     3901 tgaaccggac cgatcacc
//
LOCUS       DATDBY010000582         2395 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2465215, whole genome shotgun sequence.
ACCESSION   DATDBY010000582 DATDBY010000000
VERSION     DATDBY010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2395
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2465215"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VIT19_10940"
     CDS             <1..269
                     /locus_tag="VIT19_10940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839541.1"
                     /translation="ISKRFVCPKNSIARHNRCGVYCGARETVGGSSVSSGCWGEDSNH
                     ENGWALRPPRCSAHSIYDEAQDSLRFSFFALKPLQNQDNNQPAI"
     gene            306..1046
                     /locus_tag="VIT19_10945"
     CDS             306..1046
                     /locus_tag="VIT19_10945"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839542.1"
                     /translation="MAGASFIRLSPRASLVLFAVLLVALSAGACRKRANSDNANSNSS
                     INSAHPEEAKRQAQSLVDQARELYKNDEDERALEVLKQAIQLDPNHAEAHLRLGMSLA
                     ALGKKDEAEEQYKKAIELFKKKIQNDSKDSADYFYLGEAYNFLHRDEDAVRAYRQATQ
                     IKSDDEETWYQLGSSLNKLARYTEAIGAFEKALELQPEDYRATDGLEEAKEGAQRIRQ
                     GRKHNEDMLKKQQANANGNSNSSTKPSP"
     gene            1271..1441
                     /locus_tag="VIT19_10950"
     CDS             1271..1441
                     /locus_tag="VIT19_10950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839543.1"
                     /translation="MATYTPPPYFPQSSLSPPSKNRYLKFKLVVAAVIVLLLAIIGGA
                     ITGIVYLYKALA"
     gene            1862..2245
                     /gene="rpsL"
                     /locus_tag="VIT19_10955"
     CDS             1862..2245
                     /gene="rpsL"
                     /locus_tag="VIT19_10955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006863839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEY5839544.1"
                     /translation="MPTINQLVRKGRQAVKYKTASPALQSSPQKRGVCTRVYTQTPKK
                     PNSALRKVARVRLTNGIEVTTYIPGVGHNLQEHSIVLIRGGRVKDLPGVRYHVIRGTL
                     DSVGVSDRKKSRSKYGAKRPKGGAK"
     gene            2249..>2395
                     /locus_tag="VIT19_10960"
     CDS             2249..>2395
                     /locus_tag="VIT19_10960"
                     /inference="COORDINATES: protein motif:HMM:NF012404.4"
                     /note="binds directly to 16S rRNA where it nucleates
                     assembly of the head domain of the 30S subunit; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEY5839545.1"
                     /translation="MPRRRVAERRAVLPDPVYNSPLVTKFINGIMWGGKRSLAERTFY
                     DALRQ"
BASE COUNT          572 a          651 c          681 g          491 t
ORIGIN      
        1 gtatttccaa gcgttttgtc tgtccaaaaa actctattgc gcggcacaat cgttgcggtg
       61 tatattgcgg ggcaagagag acggttggtg gatcctccgt ctcaagtggt tgctggggtg
      121 aggacagtaa ccacgaaaat ggatgggcgc tgcgaccccc acgttgcagc gcccattcta
      181 tttatgacga agcgcaagat agcttgcgct tttctttttt tgcgcttaaa ccccttcaga
      241 atcaggacaa caatcagccg gctatttgac tcgcaaagac gattcgcgta gataggtgcg
      301 ggttcatggc tggagcatcc ttcattcggc tctccccgag agcatcgctc gttctctttg
      361 ccgttctact ggtggcgttg agcgcgggcg cctgtcgcaa acgagcgaac agcgacaacg
      421 cgaactccaa ttcatcgata aactcagcgc atccggaaga ggccaaacga caggcgcagt
      481 ctttggtcga tcaggcgcgc gagctttaca agaacgacga agatgaacgc gccttggaag
      541 ttctcaaaca ggccatccaa ctcgatccga atcatgccga ggcccatctt cgtctgggca
      601 tgtctctggc ggccctcggg aagaaggatg aggccgaaga gcagtacaag aaggccatcg
      661 agcttttcaa gaagaaaatt cagaatgatt caaaagacag cgccgactac ttctacttag
      721 gcgaagcgta caactttctg catcgcgatg aagatgcggt gcgagcctat cggcaggcga
      781 cgcagataaa gtcggatgat gaagagacct ggtatcagct tgggagctcg ctgaacaaac
      841 tggcgcgcta caccgaagcg attggcgcat tcgagaaagc gttggaactt cagccggaag
      901 actaccgcgc caccgacgga ttggaagaag caaaggaagg cgcgcaacgt attcgccagg
      961 gccggaagca caacgaagac atgttgaaaa aacagcaggc gaatgccaac gggaattcaa
     1021 attcaagcac aaagcccagc ccttagactc gcttgcgtgt cagtaccccg agcgatagcg
     1081 aggcggatca accgtccaac gccgagattg atccggtcgc taacgctccc ggtactgaca
     1141 gcaatcaccc ggcgctttgg tagagcgggg ttgaaacttc ttatgagctt tgcgaactcg
     1201 cggagtaccg agtaggatcg gtgcgtattg aagatcaatc ccgactagtc gggattctga
     1261 cttaacagac atggctactt acacaccacc gccgtatttt ccgcagagtt cgctttcgcc
     1321 accgagcaag aaccgttatc taaagttcaa gctggtcgtg gccgcggtga tcgtcctgct
     1381 gctcgctatc atcggcggcg cgatcactgg aatcgtgtat ctctacaaag cgctggcttg
     1441 agccccgcgg gcgcgcttga catcaaaagt gcgcgccttt atagtttccc gtttcggacc
     1501 aagtttccga ttcctctagt gcaacgctgt aactggttct gtcggtgcgg aggcgttgcc
     1561 cggctcgatg cgtggcatcg gtcgtttaat tattgtggcg taaagctcgc atcattcacg
     1621 atgcgaacgc ggcaaacggc cccgcctggt gccgcgacgc tacagaaaag cttcggctaa
     1681 ttttgggcta ttgggaagcc aaatccgcgc ccgcctaaaa gcgaaatcag aacgtccctt
     1741 taactaaatc tgtagcaggc cagtttgtct gcgctgactg ccggacacgt tccggaaaga
     1801 ggcaggccgc ggcccttttg cgctttacgc gctcgggagc gagttcggga aacaggtaaa
     1861 gatgccgacg attaatcaac tagttcgtaa aggacgccag gcagtcaaat acaagacggc
     1921 cagcccggca ctgcagagtt cgccgcagaa acgcggcgtt tgcactcgcg tctataccca
     1981 gacgccgaag aaaccgaact cagcgctgcg caaagtcgcg cgcgttcgtc tgaccaacgg
     2041 catcgaggtc acgacctaca ttcccggcgt cggccataat ttgcaggagc actcgatcgt
     2101 tttgattcgt ggcgggcgcg tcaaggattt gccgggcgtt cgctatcacg tgattcgcgg
     2161 cacgctggat tccgtcggcg tcagcgatcg caagaagagc cgttcaaagt acggcgccaa
     2221 acgtccaaag ggaggcgcga agtaaccgat gccgagacgc cgagttgcag agcgaagagc
     2281 cgtacttccc gatccggtct acaacagtcc gctggtgacg aagttcatca acgggatcat
     2341 gtggggcggt aagcgctcgc tggccgaacg cacgttttac gatgcgctgc ggcag
//
LOCUS       DATDBY010000583         2456 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2717257, whole genome shotgun sequence.
ACCESSION   DATDBY010000583 DATDBY010000000
VERSION     DATDBY010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2717257"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..539)
                     /locus_tag="VIT19_10965"
     CDS             complement(<1..539)
                     /locus_tag="VIT19_10965"
                     /inference="COORDINATES: protein motif:HMM:NF020295.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEY5839546.1"
                     /translation="MPKISDIQETPNPNAVKFILREPITSGVARQFASADQSQDDSLA
                     KSLFEIGNVVSVFYMDNMVTVEKEDVADWDELLPALAVPIRAAESVASTSGNGAAAAV
                     GGAIAAVTSDDPRLLKINEILDEKVRPYLAGDGGYLEIIDLKDQTLTIRYQGACGSCP
                     SSLTGTLMSIESMLKTEVDP"
     gene            863..1987
                     /gene="bshA"
                     /locus_tag="VIT19_10970"
     CDS             863..1987
                     /gene="bshA"
                     /locus_tag="VIT19_10970"
                     /inference="COORDINATES: protein motif:HMM:TIGR03999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071793 - bacillithiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-alpha-D-glucosaminyl L-malate synthase
                     BshA"
                     /protein_id="HEY5839547.1"
                     /translation="MNIGITVYPTYGGSGIVGSELGKELAARGHNVHFISSALPTRLT
                     ELNERVHFHEVEMMSYPLFEHQPYTLALATKMATVAENENLDLLHVHYAIPHSISAIL
                     ARESIKSHLRLPVITTLHGTDITLVGADRSYLPITKYGLEQSDGVTAISNYLKQSTIE
                     HFGFDRIEVIPNFVCPEDYKPKIDCELRESLSPDGVPVMVHVSNFRPVKRPVDCVEIL
                     ARVLKKTKARLVMVGDGSERTNCIHRAKCLGVSDYCQFVGKQPNIVDYLCASDVLLLP
                     SEQESFGLAALEAMAVQVPVIASRVGGIPEVVEDGETGFLSPVGDVDKMADDAARLLI
                     DPKLRREMGKRARALAIERYSTHKIIPQYIEFYERILSAK"
     gene            2048..>2456
                     /locus_tag="VIT19_10975"
     CDS             2048..>2456
                     /locus_tag="VIT19_10975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839548.1"
                     /translation="MMTRLPLAILLITQLLGGGLAQQATPTPTPSPTNQERPQQPEAE
                     DVVRITTNLVQVDAVITDKDGKLVTDLKPEEVEIYENGREQKITNFSFNLTENTTARD
                     AKRTAADKNAPAAPPSRLRTEDIRRTIALVVDDL"
BASE COUNT          546 a          681 c          701 g          528 t
ORIGIN      
        1 ggatcgactt cagtcttgag catgctctcg atggacatga gtgtgccggt cagagaactc
       61 ggacaactgc cgcaggcgcc ctggtaacgg attgtcagtg tctggtcttt caggtcgatg
      121 atttccagat aaccgccgtc acccgccagg taagggcgca ctttctcgtc gaggatctcg
      181 ttaatcttca aaaggcgcgg gtcatcgctc gtaacggcag cgattgctcc tccaaccgcg
      241 gcggccgcgc cattgccgga agtcgaagct acggattccg cagcccggat cggtacggcg
      301 agcgccggca agagttcatc ccagtcggcc acatcttcct tctcaactgt gaccatgttg
      361 tccatgtaaa agaccgagac aacattacct atctcgaaca gggacttcgc cagcgaatcg
      421 tcctggctct gatcggctga agcaaactgg cgcgcgacgc cgctagtgat tggctcgcgc
      481 agaatgaatt tcacggcgtt ggggttcggc gtttcctgaa tgtcgctgat tttaggcatt
      541 gatatgaatc cttctaatta agttgacgac cattataacc gtcgtcagtc gcggggcact
      601 aaccgggcta cgttagggcg ccctaaactc ttgcagccgc agggtcatgg gtatatagtc
      661 cccagcctca cttggccccc ctttttctca aaaggtgaga caagttgaga tgaggtgggc
      721 gattgcgagg gtcgcccgcc tctctttttg tgggtggtca gttgtcagtc gtcagtggtc
      781 agtggtaggt tgcgaatgcc gatgaagctt tctgaaaccg gctaatgact actgacaacg
      841 gacaactgac tactgacctc gaatgaacat tggcatcaca gtctatccaa cctacggtgg
      901 cagcgggatt gtcggttctg aattgggaaa ggaactagcc gcgcgtggtc acaacgtcca
      961 cttcatttcg tccgccctcc cgacgcgact gacggaattg aacgagcgcg tgcactttca
     1021 cgaagtcgaa atgatgtcgt atccgctgtt cgagcatcag ccgtacacgc tggctttggc
     1081 cacgaagatg gccacggtgg cagagaacga aaatctcgat ctgctgcacg ttcattacgc
     1141 gattccgcat tcgattagcg cgattctggc gcgcgagtcg atcaagagtc atctgcgact
     1201 gccggtcatc accacgctgc acggcacgga catcactttg gtcggcgcag atcgttcgta
     1261 tctgccgatt accaaatatg ggctggagca gtcggacggc gttaccgcaa tctctaatta
     1321 tctgaaacag tctacgattg agcatttcgg tttcgatcgc atcgaagtca ttccgaactt
     1381 cgtgtgtccc gaagactaca agcccaagat cgattgcgaa ttgcgcgaat cactctcgcc
     1441 cgacggcgtg ccggtgatgg ttcatgtttc gaactttcgc ccggtcaaga gaccggtgga
     1501 ctgcgttgag attctggcgc gcgtattgaa gaaaacgaaa gcaaggctgg tcatggttgg
     1561 cgatggcagc gagcgcacaa actgtatcca tcgcgcgaaa tgtctgggcg tgtccgacta
     1621 ttgtcaattc gtcggtaagc aaccgaacat tgttgattac ctctgcgctt cggatgtctt
     1681 gctgctgccg tctgaacagg aatcgttcgg cttggcggcg ttggaagcga tggctgtgca
     1741 ggtgcctgtg atcgcttcgc gcgtcggcgg aataccggaa gtcgtggagg atggcgagac
     1801 cggattcctc agtcccgtcg gcgacgtgga caaaatggcg gatgacgcgg cgcgccttct
     1861 gatcgacccg aagctgcgcc gcgagatggg aaagcgcgcg cgcgcgttgg ccatcgaacg
     1921 ctacagcacg cacaaaatta ttccgcagta catcgagttc tacgagcgaa tcctgtccgc
     1981 gaagtgagca tcaaaccaga ggcgctggct ggttcaattt ctcaagcacc aaagtattat
     2041 tcgacgcatg atgacccgac tccccctcgc aatcctgctc atcacacaac tgcttggcgg
     2101 cggtcttgca cagcaggcga cgcctacgcc gaccccctcg cccactaacc aggaacggcc
     2161 acagcaaccc gaagccgagg acgtggttcg catcacgacg aacctggtac aggttgacgc
     2221 ggtgatcacc gataaggatg ggaagctcgt cacggatttg aagccggaag aggtggagat
     2281 ttacgagaac ggacgggagc agaagatcac gaacttctct ttcaatctca cggaaaacac
     2341 aacggcgcgc gatgcgaaac ggaccgcagc cgacaagaac gcgccggctg caccgccgtc
     2401 gcggctaagg acggaagaca tccgacgcac gatcgcgctg gtcgtcgacg atcttg
//
LOCUS       DATDBY010000584         3185 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_848443, whole genome shotgun sequence.
ACCESSION   DATDBY010000584 DATDBY010000000
VERSION     DATDBY010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3185
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_848443"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2277)
                     /locus_tag="VIT19_10980"
     CDS             complement(<1..2277)
                     /locus_tag="VIT19_10980"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEY5839549.1"
                     /translation="MRKQNCVFAALLIVATAILAIAQTNAPRYQLPPRHVIDAFDAAP
                     LPQAILSPSKKKLALLYRRPYPTIAELSRPMLRLAGARINPRTNGPHRTGLIYAITLK
                     RIADGSETKVTVPAQANISNVRFSPNGEYLSFLNTTQNSIELWVASATGKARRVSGLD
                     RLNAASGDPCDWLHDSANMICEIVATGRGVAPSEPAVPSGPNIQENQGKPSPAPTFED
                     LLKTAHDDNLFEYYFTSQLAAYNIESARKTLIGRPAIFDGMTPSPSGEYLLISKLKRP
                     FSHLLPMGGFAEDVEVWTRRGEVVRKLADIPTREGIPINGVQTGPRGHQWRQDKPATL
                     VWVEAQDGGDLRNKAAIRDKVMSLSAPFSTPHSELAKTEWRLAGLSFTEKGIGLLSEA
                     DRASRRIRTWILEDGAQPRKLWERRQDAAYENPGTPVTRNTGAAGGGFGGGGASGPII
                     QKGDSIYLIGQGASPEGDRPFLDRLNLKTLEKERLFRSDSKSYETVVAPLDDDAKAFL
                     TRYESQKDAPNYFVHDVAGNTTRPVTDFKDPQPQLRGITRQFITYQRKDGVKLSGNLF
                     LPPGYKPGARLPVILWAYPREFGDADAASQITGSANRFTLVSGYSHLFLLLSGYAVLD
                     NPTMPVIGAGETANDKYVEQLISSAEAAIDKVVDMGVGDRERIGVGGHSYGAFMTANL
                     LAHSRLFRAGFAESGAYNRSLTPFGFQSERRTFWEVPQLYARMSPFWHAHKIKDPILL
                     MHGEQDDNSGTFPIQSERF"
     gene            complement(2705..>3185)
                     /locus_tag="VIT19_10985"
     CDS             complement(2705..>3185)
                     /locus_tag="VIT19_10985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839550.1"
                     /translation="GAQSAANCASEIRLKREVNGVRTAVRFESGRIVGPLAFAGAYYS
                     TFLGCVQFTGWADAEVTMEFSRERRAVLARFQVRDIHLNNTPGLLNDPLRNIVQSTID
                     RRYNPIELFTLEQLSTNTNIKPAGGALRLEAIDVRPEITPNELALHITYRFVCGTGG"
BASE COUNT          645 a          930 c          932 g          678 t
ORIGIN      
        1 gaaacgttcc gactggatcg gaaacgtgcc tgagttgtcg tcctgctcac cgtgcatcaa
       61 gagaatcgga tccttgattt tgtgcgcgtg ccagaacggc gacatgcgcg cgtaaagctg
      121 cggcacttcc cagaacgtgc gccgctcgct ctgaaatcca aacggggtca acgaacgatt
      181 gtaagcgccg ctttcagcaa agccggcgcg gaacaggcgc gaatgcgcca gcagattcgc
      241 cgtcatgaac gcgccatagc tgtgaccgcc gacgccgatg cgttcacgat cgccgacacc
      301 catatcaacg actttgtcga tcgccgcttc ggcgctcgag ataagttgct cgacatactt
      361 gtcgttggcg gtctctcccg cgccgatgac gggcattgtc ggattgtcca aaacggcgta
      421 acccgacaac agcaaaaaca gatgcgagta accgctgacg agcgtgaacc gatttgccga
      481 accagtgatt tggctggcgg cgtcagcgtc gccgaattcg cgcggatagg cccacaagat
      541 caccggcaga cgtgcgcccg gtttgtagcc cggcggcaaa aacaaattac ccgaaagttt
      601 tacgccgtct tttcgttgat acgtgatgaa ttgtcgagtg atgccacgta gctgtggctg
      661 tggatccttg aaatccgtaa ccgggcgcgt ggtgttaccc gccacgtcgt gaacgaaata
      721 gttcggcgca tccttctgcg attcatatcg cgttagaaaa gctttggcgt cgtcatcaag
      781 cggcgcaaca accgtctcgt aagatttgct gtcgctgcgg aacagacgct ctttctccaa
      841 cgtcttcaga ttcagccgat cgaggaacgg ccggtcacct tcgggagaag caccctgacc
      901 aatcaagtaa atggaatcgc ccttctgaat aatcggcccg ctggcgccgc ctccgccgaa
      961 gccgcctccc gccgctccgg tgttacgagt cacgggtgtt ccgggattct cataagcagc
     1021 atcctgacgc cgttcccaaa gcttacgggg ttgtgcgccg tcttcaagta tccacgtgcg
     1081 gatgcggcgg gatgctcggt cggcctcact caacagtccg attcccttct cggtgaacga
     1141 cagacccgct aagcgccatt cggtcttcgc cagttcgctg tgcggcgtac tgaacggagc
     1201 tgaaagagac ataactttgt cgcgaattgc agccttgttt cgcaagtcgc cgccgtcctg
     1261 tgcttcaacc caaacgagcg tcgccggctt gtcttgccgc cactgatgtc cgcgcggccc
     1321 cgtctgcacg ccgttgatgg gaatgccttc gcgcgtcggt atgtcagcga gcttgcgcac
     1381 aacttcgccg cgacgcgtcc acacctcgac gtcctcggca aagccgccca tcggcagcag
     1441 gtgcgaaaat ggtctcttga gtttcgagat cagcaggtat tcgccgctgg gtgaaggcgt
     1501 catcccatca aagatcgcgg ggcggccgat cagcgtcttg cgcgcgcttt cgatgttgta
     1561 ggcagcgagt tggctggtga agtagtactc aaacaaattg tcgtcgtgcg cagtcttcag
     1621 cagatcttcg aaggttggcg ccggtgaagg cttgccctgg ttctcctgaa tgtttgggcc
     1681 gctgggaact gccggttcgg atggcgccac gcctctgccg gtcgcaacga tctcgcaaat
     1741 catgttggcg ctgtcgtgca gccaatcaca cggatcgccg ctcgccgcgt tcagccgatc
     1801 gagaccgctg acacgtcgtg ctttgccggt cgcagatgca acccacagtt caatggaatt
     1861 ctgcgtcgtg ttcaggaacg acagatactc gccgttcggc gagaaacgca cgtttgaaat
     1921 atttgcctga gccggcacag tgacctttgt ttcgctgccg tcggcaatcc gcttcaaagt
     1981 gatcgcgtaa atcagcccgg tgcggtgtgg cccgttcgtc ctcggattaa tgcgcgcacc
     2041 ggccagccgc agcatcggcc gcgacagttc ggcaatggtt ggatacggcc ggcgataaag
     2101 cagcgcgagt ttcttttttg aaggactgag aatcgcctgc ggcagaggcg ctgcatcgaa
     2161 tgcatcgatg acgtgtctgg gcggcagttg gtagcgcggc gcgtttgttt gcgcaattgc
     2221 gaggatcgca gtcgcgacga tcagtagcgc ggcgaacaca cagttttgtt ttcgcacgat
     2281 gggctcctcc gaattgtgtt tgagactccg cgtgaggcgc ggattctatc agaggcgaga
     2341 ggttagaggc tagaggctgg aggctggacg ctcaaaacaa ttcacagact acgctaaccc
     2401 agtggcggta gcagtgagaa gtgagcagta gtgcgcggag cgcaccgcag cataaagccc
     2461 ggggcgtaag ccccaggtag gcgttgagtt tgaatcaaag cccgcgaagc gggcggcaga
     2521 tgtttaatcg aacgaccttt cgcccgcttt gcgggctctg aactgttggg cgcgcgatcc
     2581 tggggtttgc tcgcttcgct cgctgcaccc caggctctat gccgtcgtgc gcttcgcgca
     2641 ctgaggtcaa attcgtgacg taggggcaga agatctaaag tccaaaagtc ctctagtctc
     2701 tagcctagcc tccagtccca cacacaaagc gatacgttat gtgcaaagcc agttcgttgg
     2761 gcgtgatctc aggccgcacg tcgattgcct ccaaacgaag tgcgccgccc gcgggcttga
     2821 tgttcgtgtt ggttgagagt tgttccaggg tgaatagctc aatcggattg tagcgacggt
     2881 cgatcgtgct ctgcactatg ttccgcagcg gatcgttcaa cagccccggg gtgttgttca
     2941 gatgaatgtc gcgcacttga aaccgcgcca gcaccgcgcg ccgttcgcga ctaaactcca
     3001 tggtgacttc agcatcagcc cagccggtga attggacaca accgaggaaa gtcgaatagt
     3061 acgctcccgc aaacgccagt ggcccaacga tgcggccact ctcaaaacgc accgcggtgc
     3121 gcaccccatt aacttcgcgc ttcaaacgaa tctcgctggc acagttcgcc gcggattgcg
     3181 cgcct
//
LOCUS       DATDBY010000585         6474 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1488753, whole genome shotgun sequence.
ACCESSION   DATDBY010000585 DATDBY010000000
VERSION     DATDBY010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6474
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1488753"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..398
                     /locus_tag="VIT19_10990"
     CDS             <1..398
                     /locus_tag="VIT19_10990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839551.1"
                     /translation="EAGTEGNPIPTAAAVDSVTFARGPFRLTNDLNFIIEQPRATRII
                     IFSSPLGMTDANLASGILSLHILEYGQIPLDHIEHVGPIAPLNGSYIIVKLPADLSIL
                     NLSPGPTNLTLTLKLNGVESNATVLSIVP"
     gene            426..4337
                     /locus_tag="VIT19_10995"
     CDS             426..4337
                     /locus_tag="VIT19_10995"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5839552.1"
                     /translation="MKIPFEHFPLRFALAAAFLAFNAAAIHAQSMPGYQAPDKPKPKV
                     ESLQTKAARGQAPLRKLYDHLRPESAKSKHLPPLSARKKRSRLDKLLQIGVVRTLPFA
                     LDLVTDSAEYSTAEGGVKVASVVSEGARYVRLHFKNFSLPAGAHVFVYSAANPDFFFG
                     PYEGRGPWNNGTFWTPALPGDQVVIEYTSPLGSRALAPFTVSQIAHIYKDTPPIGETA
                     GACNLDVAPPWTEVAKSVGMLQFVTGGLVALCTGTLLNDSNTNIDHYVLTSNHCINSP
                     AEAQSAQIFWNYNSGETPGGSSSFGADLKVSGTASDFSLLRFGGVIPGLFYSGWDANP
                     VATSTGVTGIHHPSGSHKRISFGATNANCPSWLGALCPNFTGVTWNQGVTEPGSSGSG
                     IWTGAGDAASSKLVGTLTAGESSCSNPSGSDYYGRFSVTYPNVSAFLNGTNCVTSISP
                     NSQGFPAAGGTGSFNITAPAGCSWSASSTAAWLTITSPTSGTGNGTINFSVAASSELQ
                     RRGSIVVGTHLFNVNQAGGGACAPTPINYGQTINGTLATSDCPVGDGTYVDAYSFNGT
                     AGQHISILMTSSTFDTYLFLLNPDGSTLRIDDDGGGGTNSRIPSFSGYFTLPATGSYT
                     ILANSFDVGATGAYSLTLTEQPKQTLTISSKTPDSGISVFLTPAAINGVNNGTTTFGA
                     TYYQFTTVILNAQSTAGPNTVFLKWQKDGVDYSTSNGTSITMDADHTMTAVYGPTPTQ
                     VLTVASENPSGGVPITLTPNDNNGQGGGTTLFTRTYNRFTSLTLTAPISAGGNYFQKW
                     KVTDGNEVKVRTLSTFVPSIDRTVTAVYVSVPSLPDPTPTPTPSGPGQAVTFQINPQH
                     TGAQADSTMPPLAQRWTRNLGQTVSYPLIAGGKVFVTTVLGLHALDATTGATVWQTGD
                     IGNSPAAAYDAGRVFVITSNGLLRAYDASTGTQVWSRQLSGQAFSAPPTAVGGKVYVS
                     GHTTLYAVSEQDGSIQWSHPNAGGTHSSPAVSADGVYVSYSCNSSWALSPATGAVFWH
                     YTTNCFGGGGRTPVLYAGRVYDRAGDQLVLHGSAGIPVATFSSLVAPAFNGSTGYFKN
                     GSTLEARDVVSGTLKWSFTGDGTLSSAPIVVNGFVYIGSTSGKLYAVSESSGANVWTG
                     TLGAPVNAPDEHNLAAPAGLAAGEGLIVVPASNLLVAYHSSPQLITDSNNRVVAMDSV
                     TFVRDPFRLIAGHNFSSDQRTRITIFTSNLGISQPSADLSVFAANVPLTVEAVGTLAG
                     QPQYSYITVKLDQALPTGVDVPLSVIFRGTTTNAGVITIAP"
     gene            4508..>6474
                     /locus_tag="VIT19_11000"
     CDS             4508..>6474
                     /locus_tag="VIT19_11000"
                     /inference="COORDINATES: protein motif:HMM:NF013580.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M12 family metallo-peptidase"
                     /protein_id="HEY5839553.1"
                     /translation="MIQTNFHRNHSARHRAPFAVLVIALIVSAIGFSSGSVSSQGGDP
                     QRRDLDRVFSRHERLTLDPGQIQRQVKQTRSLTLNTSRGTFAMTLEPYDIRTPGYVAE
                     AWGDKGVTVLERAPVRTYKGTVQGMPGAQARLTIDEGTVEGLIVTPSELFFLEPSNRF
                     SGSAAKTDFVFYAASDVKESAGECGNTAAEMVAQHSANVSSQSSSKGPQPEAVFGPVL
                     EIGIATEADFEYFSKNEFQVQPNPQAAVEGKINVIMNQVDAIYNVQMGLKFVLMHTRV
                     WTTVNDPYTSPVPPETSIAGSDALSNFASQYNATAPPQAAGRDAAHLFMGRDFTGSTI
                     GIAYRPGLDCPFDPTGAAYGISQYLESGNLAGLTAHEIGHNMNANHVTAAQGSDCGGP
                     GITSIMNPSISPSTNFCQFSRDEITNHAIAKSACLSSPPTGCTYSLSQSTQSLPAGAG
                     GSSVNITTQPACNWAVAEGESWLTVTGGASGTGSGTVTYSVTANSVCGARTGLMRIGD
                     DVLTVTQAGKPDYLTDPATATAIAPFQTINGELSTPDCPTGIIDTGDDPEDVRVNAFM
                     DRYKFFGMQGQKIRIEMNATVEPPNGVDTYLYLYGPDGNLVPGGENDDIVLGSETNSR
                     IPCTSPCPNSTALLPLPQTGTYIIIATSYSSG"
BASE COUNT         1406 a         1905 c         1808 g         1355 t
ORIGIN      
        1 ttgaagccgg cactgagggc aatccgattc cgaccgcggc cgccgttgat tccgtcacct
       61 ttgcccgtgg ccccttccgg ctgaccaatg atttgaattt catcattgag cagcctcggg
      121 cgactcgcat cataatcttc agttcgccgc tgggaatgac tgacgcgaac ctggcgagcg
      181 gtattctgtc gcttcacatc ctggaatacg ggcagattcc actcgatcat atcgagcatg
      241 ttgggccgat cgccccgctg aacggttcat acatcatcgt gaagttaccg gcggacttat
      301 ctattttgaa tctgtccccg ggcccaacca atttgacgtt gactctgaag ttgaatggcg
      361 tcgaaagcaa tgcgaccgtc ctgagcatcg ttccgtaggt cttacgaagt tccgagatcg
      421 aatcagtgaa aatcccgttc gagcattttc ctttgcggtt cgctctagct gccgctttcc
      481 tggctttcaa cgcggccgcg attcacgcac agtccatgcc cggttatcaa gcgccggaca
      541 agccaaaacc aaaagtagaa tctcttcaga ccaaagccgc gcgtgggcag gcaccgttac
      601 gcaaactgta cgatcacctg cgacccgagt ctgcaaaaag caagcacctc ccacctttga
      661 gcgcacgcaa aaagcgcagc cggttagata agctcttgca gattggcgtg gtgcgaacgc
      721 tgccttttgc gttggatctg gtgactgaca gcgcagaata ctccactgct gaaggcggcg
      781 ttaaagtcgc atccgtagtt tcggaaggcg cgcggtatgt gcggctgcac ttcaagaatt
      841 tttcgttgcc cgccggtgcg catgtctttg tctattcagc cgcaaatccc gacttcttct
      901 tcggcccata tgaaggacgg ggcccgtgga ataacgggac cttctggacg ccggcgttgc
      961 cgggcgatca ggttgtgatc gaatacacgt ccccgctggg aagtcgcgcc ttggcgccat
     1021 tcactgtttc gcaaatcgcg cacatctaca aggacacgcc gccaattggc gaaacagccg
     1081 gcgcttgtaa tctcgacgtc gcgccgccat ggaccgaggt cgcgaaatca gttgggatgc
     1141 tccagttcgt aaccggaggc ctggtcgcct tgtgtactgg tacgttgctg aatgacagca
     1201 acactaacat cgatcactac gtgttgacgt caaatcattg catcaattcg ccagccgaag
     1261 cgcaatccgc gcagattttt tggaattaca atagcggcga aactcccggc ggctcgtcgt
     1321 ccttcggcgc cgatctgaaa gtgagcggca cggccagtga cttttctctg ttgcgctttg
     1381 gtggggtcat ccctggtctt ttctattcgg gttgggatgc gaatccggtg gcaacttcaa
     1441 cgggtgtgac cggcattcat cacccaagtg gctcgcacaa gcgcatttcg tttggcgcga
     1501 caaacgcgaa ttgcccctcc tggcttggcg cgctctgccc aaacttcacc ggcgtaacct
     1561 ggaatcaagg agtcactgag ccgggttcgt caggttcggg aatttggaca ggcgccggcg
     1621 atgcagccag ctcaaaatta gtcgggacgc taactgctgg agaatcgtcg tgcagcaacc
     1681 cgtcgggaag cgactattac ggacgcttca gcgtgaccta cccgaacgtg tcggcgtttc
     1741 ttaacggaac gaactgtgtt acttcaatca gccctaacag ccagggcttc cccgccgctg
     1801 gcggtactgg cagtttcaac attacggcac ccgccggatg ttcgtggagc gcgagcagca
     1861 ccgccgcatg gttaacaatc acatcaccga cgagcggcac aggcaacggc acgatcaatt
     1921 tctcagtcgc ggcgagcagt gaactccagc gtcgtggttc aatcgtcgtc ggtactcatt
     1981 tgttcaatgt gaatcaggcg ggcgggggag cctgcgcgcc gacgccgatt aactacgggc
     2041 aaacgataaa tggaacgctc gcaacttcag attgcccggt cggggatggc acttacgtcg
     2101 acgcctacag tttcaatgga acggcgggtc agcacatttc gattttgatg acatcctcaa
     2161 cattcgatac ttatctcttt ctcttgaatc ccgatgggtc gactttgcgg atagatgacg
     2221 acggaggtgg cgggaccaat tcacgcattc cttcgtttag cggctatttt acgctgcctg
     2281 cgactggcag ttacacgatt ctcgcgaact cgtttgacgt gggcgcgacg ggcgcttatt
     2341 cgttaacact caccgagcaa ccaaagcaga ctcttaccat ctcatcaaaa actcccgaca
     2401 gcggtatcag cgtgtttctc acgccggcag ccatcaacgg tgtaaacaac ggcacgacaa
     2461 catttggcgc gacgtattac cagttcacaa cggtgatcct caacgcgcag agcacggccg
     2521 ggccgaacac ggtttttcta aagtggcaga aagatggcgt ggactattca acatccaacg
     2581 gaacttccat aacgatggat gccgatcaca cgatgacggc ggtttacggt ccgaccccga
     2641 cacaggtttt gaccgtcgcg tcagagaacc caagcggcgg cgtgcccatc accctcaccc
     2701 ccaacgacaa taacggtcag gggggtggga caaccttatt cacgcgaacc tacaacaggt
     2761 tcactagcct cactctcacg gcgcccatca gcgctggcgg caactacttt caaaaatgga
     2821 aggtgacgga tggcaatgag gtcaaggtca gaactttgag taccttcgtg cccagcatcg
     2881 accgcacggt caccgcagtt tacgtatcgg tgccgtcttt gcccgatccc accccgacgc
     2941 caacgccgag cggaccgggc caggcggtca cttttcaaat caatccgcag cacactggtg
     3001 cgcaggccga ttcgacaatg ccgccgctgg cccagcgttg gacgcgcaat ttgggccaga
     3061 cggtctctta tcctctgatt gcggggggca aagtatttgt gacgaccgta ctcggtcttc
     3121 acgcacttga tgcgactacc ggtgcgaccg tttggcaaac gggggatatc ggcaacagtc
     3181 cggcggcagc ttacgatgcc ggccgcgtat tcgtaatcac ctccaacggc ctgctgcgcg
     3241 catacgatgc gtcaaccgga acacaggtct ggtcgcgaca actgtcgggt caagcgttta
     3301 gcgcgccgcc gaccgccgtt ggcggcaagg tctatgttag cggtcacaca acgctgtacg
     3361 ccgtgtctga gcaggacgga agtattcagt ggagccatcc caacgccgga ggcacccaca
     3421 gttcgccggc cgtgtcagca gatggagtgt acgtgtcgta ttcgtgcaac agcagctggg
     3481 ccctgtcacc ggcgacagga gccgtcttct ggcattacac gacgaactgc tttggtggcg
     3541 gcggaagaac gccggttctg tacgccgggc gcgtgtacga tcgggccggg gaccaattgg
     3601 tcctgcacgg gagcgccggt atcccagtgg cgactttctc atcactggta gccccggcct
     3661 tcaatggttc gactggttat tttaagaatg gctcaacgtt agaggcgcgc gacgttgttt
     3721 ccggaacatt gaaatggtcc ttcaccggcg atgggactct cagctcggcg ccaattgtgg
     3781 taaacggctt cgtttacatt ggctcgacca gtggaaagtt gtacgcggtc agcgaaagct
     3841 cgggcgcgaa tgtctggacg ggaacgttgg gcgctccagt gaatgctcca gacgagcaca
     3901 acctggcagc gccggccgga ctcgccgcgg gcgaaggctt aatcgtagtg ccggcttcga
     3961 acctgctggt cgcttatcac tcgtcgccgc agttgattac cgactcgaac aatcgggtcg
     4021 tggcgatgga ctccgtcact tttgttcgcg atccgtttcg cttaatcgcc ggccacaact
     4081 tcagctcgga tcaacgcact cgaataacta tcttcacttc taatctcgga atatcccagc
     4141 cctcagcaga tctgtcggtg ttcgcggcaa acgttccgtt aacggtcgaa gcggtgggga
     4201 cgctggcggg tcagccgcaa tactcgtaca tcactgtgaa gctcgaccag gctcttccca
     4261 ccggagtgga tgtgccgcta agcgttatct tccggggtac cacaacgaat gccggcgtga
     4321 tcaccattgc gccctaaccc gttcgccggc gcatctcacg aactgaaacg ttcacacggt
     4381 ccgctcaaac tgagcgcgaa actgtgggcg cgctccgcgg aagagggcgg ggggcagtac
     4441 gcacgactcg cagcacacaa ccaatcggct ttataatgcc ttctcatcaa caaggcagca
     4501 ccacgtaatg atccaaacaa attttcatcg taatcattcc gcgcgccatc gagcgccctt
     4561 tgccgttctt gtaatcgcac tgattgtctc cgctatcggg ttcagttccg ggagcgtctc
     4621 gagccagggc ggcgaccccc agcggcgcga tctggaccga gtttttagcc gccacgagcg
     4681 gctgactctc gatccgggac agattcaaag acaagtgaag cagacgcgtt cgctgaccct
     4741 caacacctca cgcggcacat ttgcaatgac gttggagccc tacgacatac gcacgccggg
     4801 ctacgtggcg gaagcctggg gcgacaaggg cgtgacggtt ctggagcgcg caccggtgcg
     4861 cacgtacaag ggcacagtcc aagggatgcc gggggcgcag gcacgcttga cgatcgacga
     4921 aggaacggtc gaagggctga tcgtcacgcc gagcgagctt ttctttcttg aacccagcaa
     4981 ccgtttttcg ggaagtgctg ctaaaacgga tttcgttttc tatgcggcat cagatgtgaa
     5041 ggaatccgcg ggcgagtgcg gcaacacggc agcggaaatg gtcgcccagc attcggcgaa
     5101 cgtaagcagt caatcatcgt cgaaaggccc acagccggaa gccgtcttcg gcccggtttt
     5161 agagatcggc atcgccacgg aagcagactt tgaatacttc tccaaaaacg aatttcaggt
     5221 tcagcctaat cctcaagcgg ctgtggaagg caaaatcaat gtcatcatga atcaggtgga
     5281 cgctatctac aatgtgcaga tggggttgaa gttcgtgctg atgcacacgc gcgtgtggac
     5341 cactgtgaac gatccgtata cgtcccccgt tccacccgag acgtcgattg ccgggtcaga
     5401 cgcgctcagc aattttgcct ctcagtacaa cgcgaccgcg ccgcctcaag cagccgggcg
     5461 cgacgcggca caccttttca tgggtcgcga ctttaccggt tcaacgatcg gcatcgcata
     5521 tcggccaggc ctggactgtc cttttgatcc gactggcgcc gcttacggca tttcgcagta
     5581 cctggaaagc ggcaatctgg cgggactgac cgctcacgaa atcggtcaca atatgaatgc
     5641 gaaccacgtt accgcggcgc aaggcagcga ctgtggtggt ccggggatca cttcaatcat
     5701 gaacccgagt atttcgccca gcacgaactt ctgccagttc tcgcgcgatg agatcaccaa
     5761 ccatgcgatc gcaaagagtg cctgtctcag tagtcctccg actggatgca cttattcact
     5821 ctcgcaatcg acgcagagtc ttccggcggg cgccggcggc agcagtgtca acattacgac
     5881 tcaaccggca tgcaattggg cagttgcgga gggtgaatcc tggttgactg tgactggcgg
     5941 cgcgagcggc acaggcagcg ggaccgtgac ctactcagtc acggcaaaca gtgtctgcgg
     6001 tgcgaggacc ggcttgatgc gcattggtga cgacgtactc acggtcacgc aggccggcaa
     6061 acccgattac ctgactgatc cggccacagc caccgccatc gctcccttcc aaaccataaa
     6121 cggcgaactc tcaacccctg actgcccgac gggaatcata gatacgggcg atgacccgga
     6181 ggatgtgcga gtaaacgcct tcatggaccg gtataagttc tttggcatgc agggacaaaa
     6241 gatcagaata gaaatgaacg ccacggtcga gccgcccaat ggagtggata cttatctcta
     6301 tctgtacggc cctgacggga acctggtgcc cggcggcgaa aacgacgaca tagtactcgg
     6361 cagtgaaacg aattcgcgca taccttgtac ctctccgtgc cctaacagca ctgcgctcct
     6421 gcctttgcct cagaccggca cgtacataat catcgccacc tcgtactcga gtgg
//
LOCUS       DATDBY010000586         3593 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2103835, whole genome shotgun sequence.
ACCESSION   DATDBY010000586 DATDBY010000000
VERSION     DATDBY010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3593
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2103835"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2132)
                     /locus_tag="VIT19_11005"
     CDS             complement(<1..2132)
                     /locus_tag="VIT19_11005"
                     /inference="COORDINATES: protein motif:HMM:NF012688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HEY5839554.1"
                     /translation="MPKIESPADARPAERVFLIDSMSHIFRAFYAPMANRAAPLMTSK
                     GQVTNAVFIFTNMLRKLIQDEKPKYIAAIFESKEKTFRHEAFADYKATRLEMPDDLAS
                     QLPFIGRLCEAYNVPMISLSGYEADDVIGTLAVKAAEKGLKAVIVSNDKDMCQLVRDP
                     WIVAMRQNSQVVKRREPVPPIEWCDEGWVLKKFGVPAGKLVDLLGLMGDSIDNIPGAP
                     GVGPKGAVQIIQQFGSIERALEHWEDIKNKRYRESLRDNAELIRTSRELAQIKTDLDV
                     ELDLELLERRPPDRAAAYDLFRELEFANLTQEFADGAVASARVTAERDYRQIRNKAEL
                     DALIQNLWQAETLGFAVSNTTPAGAGQQQSTRDDHGARGIAFSAAGGKSAFVDFDSFA
                     EGKDAAVASMRELFANGLFEKSVHDYKRATALLTPLGIELAGVADDTLLAAYMIDPTR
                     SRYDLVDLARDAVGIEGGGPPHDGWSESGWQAVEVADLTAQVAPVLRQRIDEKDLGKI
                     YRDVELPLAPLLYRMERAGMRVDTSVLAELSGRLGKQLESLTDRICQMAGREFNINSP
                     KQVAECFEAMNIISGRKTSTGRVSTSKAVLEELALTHELPRLIIEYRELEKLKSVYTD
                     ALPHQVAADGRVHGQLNQTVAATGRLSASDPNLQNIPIRTELGREIRRAFVAEKGNKL
                     ISADYSQLELRLLAHITRDEVMLDAFQKG"
     gene            2460..3341
                     /gene="lpxC"
                     /locus_tag="VIT19_11010"
     CDS             2460..3341
                     /gene="lpxC"
                     /locus_tag="VIT19_11010"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: protein motif:HMM:TIGR00325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEY5839555.1"
                     /translation="MKQTTLAAPVSTKGIGLHTAVPVTVSLMPAPPDTGYVFRRTDLG
                     GFEIPATVESVAHCSYATTLMRTGVMLSTVEHLLSALRGCGVDNAYVDVDNLEIPIMD
                     GSAETFAEMIESAGLVEQSTARRALMVRERVTVESGNRRISLEPAETYEIDCLIDFQH
                     PMIGIQHRRLVLENGSFGRDIASARTFGFIEEVEALRRANLIRGGSLENAIVLTKTGM
                     LNETGLRFSDEFVRHKILDIIGDFALLGMTLQGRVKAERSGHLLHAALMSSLLRNRKA
                     WEIVDLPVRAPAMVTAG"
BASE COUNT          737 a         1007 c         1015 g          834 t
ORIGIN      
        1 cctttttgga acgcgtccag catcacttcg tcgcgcgtga tgtgggcgag caggcgtaat
       61 tccagttgcg agtaatcggc cgagatcagt ttgtttcctt tttcagccac gaaggcgcgg
      121 cgaatttcac ggccgagttc agtgcgaatc ggaatattct gcaagttcgg atcgctcgct
      181 gaaagacgcc ccgtcgccgc gaccgtctgg ttgagctgcc cgtgaacccg gccatcggca
      241 gcgacctgat gtggcaatgc gtcggtgtag acgctcttca atttctccag ttcgcgatat
      301 tcgataatta aacgcggcaa ctcgtgcgtg agcgccagtt cctcgagcac ggctttgctg
      361 gttgagacac gaccggtcga cgtcttgcga ccggaaatga tgttcatagc ttcgaagcac
      421 tcggcgactt gcttcggcga attaatattg aactcgcgac cagccatctg acagatcctg
      481 tcggtcagac tttctaattg tttgcccagc ctgcctgata actcagccag cactgaagtg
      541 tcgacgcgca ttcccgcgcg ttccatccgg tacagcagcg gagcaagcgg caactctaca
      601 tcgcgataga ttttgccgag gtccttttca tctattcgct gccgcagaac aggggcaacc
      661 tgggcggtta aatccgcaac ttcgacggct tgccagccgc tttcactcca accgtcgtgc
      721 ggcggcccgc cgccttcaat gccaactgcg tcacgcgcaa gatcgacgag gtcgtatcgg
      781 ctgcgcgtcg gatcaatcat gtaagctgcc agcagagtgt cgtccgcgac cccggcgagt
      841 tcaattccca acggcgtcaa caaagccgtt gcgcgcttgt agtcgtggac ggacttctcg
      901 aacaaaccgt tggcaaacag ttcgcgcatt gaagccactg cggcgtcctt gccttcggca
      961 aagctgtcga aatccacgaa ggctgactta cctcccgccg ccgaaaaagc gatgccacgc
     1021 gcgccatgat cgtcgcgagt gctctgctgc tgaccagctc cggcgggcgt ggtgtttgat
     1081 accgcaaagc ccaaagtttc cgcctgccaa agattctgaa ttagcgcatc aagctcagcc
     1141 ttgtttcgaa tctgccggta atcgcgctcg gccgtgacgc gtgcgctggc gaccgcgcca
     1201 tcggcaaatt cctgggtgag gtttgcgaac tcaagttccc gaaacaggtc atacgcagcg
     1261 gcgcgatccg gtgggcggcg ttctaatagt tcaagatcca gttcaacgtc gagatcggtt
     1321 ttgatctgcg ccagttcgcg cgaggtgcga attagctcgg cattgtcgcg cagcgattcg
     1381 cgataacgtt tgttcttaat gtcttcccaa tgttcaagtg cgcgttcgat cgatccaaac
     1441 tgctggatga tttgcacagc gccctttggg ccaacacccg gcgcgccggg aatgttgtcg
     1501 atcgaatcgc ccatcagtcc gagtaaatcg acgagcttgc ccgccggcac accgaatttc
     1561 tttagcaccc agccttcgtc gcaccattcg attggcggca cgggttctct gcgcttcacg
     1621 acttgcgagt tctgccgcat cgcgacaatc catggatcgc gcacgagctg gcacatgtcc
     1681 ttgtcattcg aaacgatgac tgctttcagg cctttttctg ccgctttcac tgccagcgtt
     1741 ccgatcacgt cgtcggcttc gtaaccggaa aggctaatca tcggcacgtt gtaagcttca
     1801 cacagacgcc cgatgaacgg cagctgtgaa gctaagtcat caggcatttc caggcgcgtt
     1861 gctttgtaat cggcgaatgc ttcgtggcga aaggttttct ctttcgactc gaaaatcgcg
     1921 gcaatgtatt tcggcttttc gtcctggatg agtttgcgca gcatgttcgt gaagatgaac
     1981 accgcgttcg tcacctgccc tttcgaagtc atgagcggtg cggcgcggtt cgccatcggc
     2041 gcgtaaaaag cgcggaagat gtgcgacatc gagtcgatga ggaagactcg ctcggccggc
     2101 cgcgcgtcgg caggggattc tattttcggc atgatcgatt tcgatcatag ggttcagtat
     2161 taagtaaggc aagcggctgt ttgcgcgata cgcgtggcgt gaatgctgcg atttagatcc
     2221 gcaagcgtcg ccacgacgcc acaacccgat cgacgaaggt gcgctatcat cgcatgcgca
     2281 tgcgggcatg agctttgcac ataagaatgg ctcggcgtag ttaactcata agaggaataa
     2341 tccacagatt acgcagataa gcaggaaaga cagactgaac tgtatgcgct cgctgaattg
     2401 gttttgaatc ggtggaatct gtgtaatctg tggataaagt tctttcgacg cgaccacgaa
     2461 tgaagcaaac gactctcgct gcacctgttt caactaaagg gattggactt cacaccgcgg
     2521 tgccggtcac ggtgagcttg atgcctgccc cgccggacac gggctatgtg ttccggcgca
     2581 ctgaccttgg cggttttgaa atcccggcga ccgtcgaatc cgtcgcccat tgtagttacg
     2641 ccacgacgtt gatgcgcacg ggcgttatgc tttcgaccgt cgagcacctc ttgtcggcgc
     2701 tgcgtggctg cggagtggac aacgcttacg tcgatgtgga taacctggaa attccgatca
     2761 tggacggctc agcagagacg ttcgctgaga tgattgagtc tgccggcctg gtcgaacaat
     2821 caacggcgcg gcgcgcgctg atggttcgcg aacgcgtgac cgtcgaatcg ggcaaccgcc
     2881 gcatcagtct tgagcctgcc gaaacttatg agatcgattg cttgatcgat tttcagcatc
     2941 ccatgattgg aattcaacat cgccggctgg tgctggagaa tggatcattt ggccgcgata
     3001 tcgcttcggc acgcacgttc ggctttattg aggaagtgga ggcgttgcgc cgggcgaact
     3061 tgatccgcgg cggctcgctt gaaaatgcga tcgtgctcac caaaacggga atgctgaacg
     3121 agacgggact gcgattctcc gacgaattcg tccgtcacaa gatcctcgac atcattggcg
     3181 atttcgcgtt gttgggaatg acgctgcagg gacgtgttaa ggccgaacgg agtggccacc
     3241 tattgcacgc cgcgctgatg tcttcgctgc tgcggaatcg caaggcctgg gagattgttg
     3301 acctgccggt ccgggcgcct gcgatggtca cggcgggctg accgtccgtg cttgcagttc
     3361 ctgctttgcg cctttgcggc tttgcgtgaa ccaaccgctc tcgcaagagg catttcacgc
     3421 aaagacgcaa agtcgcaaag gttcgcaaag gcagatagga gtactaccca acctttaacc
     3481 cgcccgccgt gggttgttac tttctgctac aataaatttc cgccaaccgc tcgttggatt
     3541 tccggcatct aactctggct aatcgattcg gggggttctt caatcagatg aaa
//
LOCUS       DATDBY010000587         2718 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2124316, whole genome shotgun sequence.
ACCESSION   DATDBY010000587 DATDBY010000000
VERSION     DATDBY010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2124316"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            259..639
                     /locus_tag="VIT19_11015"
     CDS             259..639
                     /locus_tag="VIT19_11015"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog domain-containing protein"
                     /protein_id="HEY5839556.1"
                     /translation="MNADPAIRITMLPRDTNSQGTIFGGVILSYIDMAGAIEAHRRTG
                     MERFVTVAMREVIFHQPVFVGDLVSFYSETVKVGTTSITTRVVVEAERYGSPGAKARV
                     TEAEVIYVAVDREGKKRKIDTSSA"
     gene            complement(882..1343)
                     /locus_tag="VIT19_11020"
     CDS             complement(882..1343)
                     /locus_tag="VIT19_11020"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEY5839557.1"
                     /translation="MEKSIQETYAPNMACFGCGPANDKGLHIRSFPEGDEVVATFNPE
                     AYQEAFPGMLSGGIIGTLLDCHCNWTAAYHLMKQAGVDRPPCTVTADYTITLRRPTPT
                     DQPVELRARIVESNEDRAIVEGELIAHGKVTATCRGTFVAVKPGHPAYHRW"
     gene            complement(1427..>2718)
                     /locus_tag="VIT19_11025"
     CDS             complement(1427..>2718)
                     /locus_tag="VIT19_11025"
                     /inference="COORDINATES: protein motif:HMM:TIGR02262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HEY5839558.1"
                     /translation="PSLFGDEIVPTADLKLLVVTRDGETDLSVSNIHVTRFDVAERRP
                     LADDFYRSTTPDADAFILYTSGSTGEPKGAVHSQSDIFYTNETFCREVLRLREGDRLF
                     SSSRLPFAYGLGNAFTFPLLNGFTTILCREKPTPEVVSRIFRDYRPTIFFGVPVVYRM
                     LLEHHRAGVGLPTSVGSSADKSPTEAGTLNTSSLRLCVSAGEALPAQLGEDWQRTLGV
                     EVLDGIGSTEMLHMFISNHAGEARYGSSGRLVSGYDVKLIDHEGAPVAQGAEGNLWIR
                     GASAASRYWQRPETSAHTFVEGWVRTGDLYRQDADGFWWHMGRSDDCFKPTGQWVSPV
                     EVEGVLLKSDRIRVAAVVEGFDKDKLSCVCAFVVRANDADGEEVVEQALRALCESALP
                     RFKQPRRYIFVSELPYTATGKVQRFKLREQLRAETRP"
BASE COUNT          571 a          796 c          756 g          595 t
ORIGIN      
        1 tagacaagcg aactgaatga gagtatacct gcgatgccca gtgtttaatc aaagcgcttt
       61 ggttaggatt ggacaggcgg ggcgagtcag ggttttgccg caaggctttt cccggcttcc
      121 ccgcttttcc ggatagtccg cacttgatgc gctgatagag taagacgaag cggcggggtt
      181 tcggcctcgc cgcttttact tttcccgccc tgccgatcgt tcatttacga ttgacccttc
      241 acgctttaat atcatgcgat gaatgctgat cccgcaattc gcatcacgat gctgccgcgc
      301 gacacgaact cgcagggcac gatcttcggc ggcgtcattc tcagctacat agacatggcc
      361 ggcgcgatcg aagcgcatcg ccgcacgggg atggagcggt tcgtcaccgt agccatgcgc
      421 gaagtcatct ttcatcagcc cgtgttcgtc ggcgatctcg tgagttttta ctccgaaacc
      481 gtcaaagtag gcaccacttc aatcacgact cgagtcgtcg tggaggcgga acgatacgga
      541 tcgccgggag cgaaggcccg cgtaacggaa gcggaagtta tttacgtcgc ggttgatcgg
      601 gaagggaaaa agagaaagat cgacacctcg tccgcgtagc ggacgtttga atgtagccca
      661 gcgctttagc gctgggatcc cgtcccttat taattcatga gtccgcgaag cggacgacag
      721 aagttttatt tgtgagattt ctgtcgcccg cttcgcgggc tcaaaatcat tttggccaac
      781 gatccccggg ctcacgcccg gggctactga tataccgcct gcttcgcagg ctggttgagt
      841 tatttacact tctcgggaag cacgacggaa gtcaaagcaa ctcaccagcg atgataggcg
      901 ggatgacccg gcttcaccgc cacgaaagtt ccgcgacaag tagcagttac tttgccgtgc
      961 gcgattaact caccttcgac gattgcgcga tcttcgttgg attcgacaat ccgcgctcgc
     1021 agttcaactg gttggtcagt cggcgtcggt cgccgcaaag tgatcgtgta gtcggcagtg
     1081 accgtgcacg gcggacgatc gactccggct tgcttcatca ggtgatatgc cgccgtccag
     1141 ttgcaatgac aatccagcag cgtgccgatg atgccgccgc tcaacattcc ggggaaggct
     1201 tcctgataag cttccgggtt gaaggtggcg accacttcat cgccctccgg aaagctgcga
     1261 atgtgcagac ctttgtcgtt cgcggggcca cacccaaaac acgccatgtt cggcgcgtaa
     1321 gtctcctgga tacttttttc cataatgatc ctggcggaaa cccgcccgtg agggagggtg
     1381 cttgaaatct cagatctcaa ctttgagatc tcaaaagcac cctccctcac ggtcgggttt
     1441 ccgccctaag ttgctcgcgt agtttgaatc gttgcacctt tccggtcgca gtgtaaggca
     1501 gttctgaaac aaagatgtag cgacgcggct gtttgaatct tggcagtgcg gattcgcaca
     1561 aggcgcgcaa ggcttgctcg actacttctt caccatcggc gtcgtttgcg cgcacgacga
     1621 aagcgcacac gcaggacaac ttgtctttgt cgaacccttc gacgacggca gccacgcgaa
     1681 tcctgtcact cttcaatagc acgccttcca cttcgacggg tgaaacccat tgcccggtgg
     1741 gtttgaagca atcatcgctg cggcccatgt gccaccagaa tccgtccgca tcctgacgat
     1801 acaaatctcc cgtccgcacc cagccttcga cgaacgtatg cgccgaagtt tcaggccgct
     1861 gccagtatcg gctcgctgca ctcgcgccgc gaatccagag atttccttcc gcgccctgcg
     1921 cgaccggtgc cccttcatga tcgatcagct tcacatcgta gccactcact agccgtccgc
     1981 tgctgccata gcgcgcctcg cctgcgtgat tcgagatgaa catgtgcagc atttcagtcg
     2041 aaccgatgcc gtcgagcact tccacgccga gggtccgctg ccagtcttcg cccagttgcg
     2101 caggcagcgc ttccccggcc gagacgcaca aacgcaggct cgaagtgttc agagttccag
     2161 cttcagttgg gcttttgtca gcggaagatc cgactgaagt cggtagtcca acgcccgctc
     2221 gatgatgttc gagcagcatg cgatacacga ccggcacacc aaagaaaatt gtcggccgat
     2281 aatcgcggaa gatacgcgac acgacttccg gcgtgggttt ctcacgacac aagatcgtcg
     2341 tgaatccgtt cagcagcgga aacgtgaacg cgttgcccaa gccgtaagcg aacggcagac
     2401 gcgacgatga aaacaagcgg tccccttcgc gcagtcgcaa aacctcacgg cagaacgttt
     2461 cgttcgtgta gaagatgtcg gactgactgt gcacggcgcc tttcggttcg ccggtgctgc
     2521 cggaggtgta aaggatgaac gcgtccgcgt cgggcgtcgt gctcctgtaa aagtcgtcgg
     2581 caagtggccg ccgctcggcg acgtcgaatc gcgtaacgtg aatgtttgaa accgagaggt
     2641 ctgtttcgcc atcgcgtgtc accacaagca gcttcagatc ggctgttggt acgatctcat
     2701 caccgaacag tgatggtg
//
LOCUS       DATDBY010000588         2170 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1695415, whole genome shotgun sequence.
ACCESSION   DATDBY010000588 DATDBY010000000
VERSION     DATDBY010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1695415"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..424
                     /locus_tag="VIT19_11030"
     CDS             <1..424
                     /locus_tag="VIT19_11030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839559.1"
                     /translation="VPSLQPTPSPTPDNRASFDAKRAAVDADPQKWLAENVTAGSKPF
                     ESKDPEFLYLYGRAQMLAGNHRDAGQAFDLALANYQTASATPLPLNAEVKLAQAAAAL
                     KQSSPATGTPTQDALAGQQKAATILDELLGVKSQTTPK"
     gene            438..1982
                     /locus_tag="VIT19_11035"
     CDS             438..1982
                     /locus_tag="VIT19_11035"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HEY5839560.1"
                     /translation="MSELKLLQCRLDGRYDVENCLGRGSYAEIYMARDRAATDERFRE
                     VVIKALNVLLQGYQDPELERTLIQNFQNEAIALDRVRHPNIISRLGHGTALDLNGTAF
                     HYIVLEFLGGGDLSALARREPLKLETALFYLQQVCSGLAHAHESGVIHRDIKPQNLLL
                     TADHQIVKIADFGVARMEASEGAITRVGTNIYAAPEHSPLLQTAQLGTASLSCERLTP
                     AADIYSLAKTAYTLICGLPPRRFAHEPVTELPEHLASKPWAEGMIAVLEHATQTRPDE
                     RYQTVQEFWDELSDAMLPPTRELHAVEPPRAVTSDLNLAAVATAAPPRPRFESSQELR
                     EEPAANGARPRIVVPIANQSVPAAVATAAPTFGGVQQQPGRVTVAVQGGGQKPAQVEP
                     APKRSNRLRAILVSLVLIIAFAGMLLATRNYIRNRWARQQTQQTGPIGREALTTTDLN
                     LRAGPSSSNDRVGVAAAGSRVKVLSISGSNANWYEVQVLEHGSPKTDPSFSDRGWVNR
                     QYLKFE"
BASE COUNT          470 a          691 c          618 g          391 t
ORIGIN      
        1 tgtcccctcg cttcagccca cgccctcacc gacgccggac aaccgcgcat cgttcgacgc
       61 gaagcgcgcc gccgtcgatg cggatccgca gaagtggctg gctgaaaacg tgacggccgg
      121 ttcgaaaccg ttcgaatcga aggaccctga gttcctctac ctgtatggcc gcgcgcagat
      181 gctggccggt aaccatcgcg acgccggcca ggcattcgat ctcgcacttg cgaactatca
      241 gacagcttcg gccactcccc ttcctttgaa cgcggaagtg aagctggctc aggcagcggc
      301 agctctcaag cagagttcac ctgcgaccgg aacccctact caagacgctt tggcgggtca
      361 gcaaaaagca gcaaccatcc tcgacgaact cctcggagtg aaaagccaga ctacgcccaa
      421 atgacagcgg acgatgcatg tcagagctga aacttctaca gtgccgactg gatggccgtt
      481 acgacgtcga aaattgtctg ggccgcggca gctacgctga gatttacatg gcgcgtgatc
      541 gcgccgcgac tgacgaacgc tttcgcgaag tcgtaatcaa agccctcaac gttctcctgc
      601 agggttacca ggatcccgaa ctcgaacgca cgctaattca aaactttcag aacgaagcga
      661 tcgctctcga tcgggtgcgc catccgaaca tcatcagtcg cctcgggcac ggcacggcgc
      721 tcgatctcaa cggaactgct tttcattaca tcgtgcttga gtttctcggc ggcggtgacc
      781 tgtcggcgtt agcgcggcgc gagccgctca agcttgaaac cgccctcttc tatcttcagc
      841 aggtttgctc gggcctggcc cacgcgcacg agtcgggtgt catccatcgc gacatcaagc
      901 cgcagaacct cctgctcacc gccgaccatc aaatagtcaa gattgccgat tttggtgtgg
      961 cgcgcatgga agcttcggaa ggcgccatca cgcgcgtcgg cacaaacatc tacgccgcgc
     1021 cggaacacag tccgcttctg caaaccgcgc aactcggcac cgcgtcattg tcctgtgaac
     1081 ggctgacgcc ggcggccgat atctattcgc tggcaaagac tgcttacacg ttgatttgcg
     1141 gcttgcctcc gcgccggttc gcgcacgaac ccgtcaccga gctgcctgag catttagcga
     1201 gcaaaccctg ggcggaaggc atgatcgcgg tactcgagca cgccacccag acgcggcccg
     1261 acgagcgcta ccaaacggtg caggagttct gggacgaact aagcgacgcg atgctgcctc
     1321 cgacgcgcga actgcatgcg gttgaaccgc cccgcgcagt cacatccgat ttgaaccttg
     1381 ccgcagtggc tacggccgcg ccgcccagac cccgattcga gagttcacag gagctgagag
     1441 aagagccggc ggcaaacggc gcccgcccac gtatcgtcgt cccgatcgcc aaccagagcg
     1501 tgccggcggc cgtcgcgact gccgcgccaa ctttcggcgg cgttcagcag caacccggcc
     1561 gcgtcacagt cgccgttcag ggcggcggtc aaaagcccgc ccaggtcgaa cctgcgccga
     1621 agcgctcaaa ccggctgcgg gcgattctcg tttccctggt actgattatc gcattcgcgg
     1681 gaatgctgct ggcgacgcga aactacattc gcaatcgctg ggcacggcag cagacccaac
     1741 aaaccggccc catcggacgt gaagctttga ccacaactga tctaaacttg cgcgcgggcc
     1801 caagttccag taacgatcgc gtgggcgtgg cggcggcggg atcgcgcgtg aaggttttga
     1861 gcatcagcgg tagcaatgca aactggtacg aagtccaggt gcttgagcat ggcagtccca
     1921 aaaccgatcc aagcttctcg gatcgcggtt gggtgaacag gcagtatttg aaattcgaat
     1981 aacggtcagt tgtcagtcgt cagtggttcg tcgcacaatc tgactactga caaccgacaa
     2041 ctgactactg acaaccgaat agaatgagcc taattgaatc aattcgtcgc tggatcgacg
     2101 gcgagaccac tgacgacatc ctcgaagaag ttggcgagca ggcgcatccg cgtcgcgcgt
     2161 cggaagagtt
//
LOCUS       DATDBY010000589         7916 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_877179, whole genome shotgun sequence.
ACCESSION   DATDBY010000589 DATDBY010000000
VERSION     DATDBY010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 7916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7916
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_877179"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /gene="ndhC"
                     /locus_tag="VIT19_11040"
     CDS             <1..375
                     /gene="ndhC"
                     /locus_tag="VIT19_11040"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEY5839561.1"
                     /translation="GGPSTAYLPVMIFFVVAIIFPVLPIVLGRFLRPYKYQKDKMRPY
                     ECGIDPETGAHDRFTVRFYIIAMLFLIFDVETIFLLPWAIIFMGDDFSFTKFALIEMF
                     VFIGILVVGYYYAWRKGALEWA"
     gene            493..1116
                     /locus_tag="VIT19_11045"
     CDS             493..1116
                     /locus_tag="VIT19_11045"
                     /inference="COORDINATES: protein motif:HMM:NF005012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HEY5839562.1"
                     /translation="MAEHDEGFVLTTVDSITNYVRRSIAAKAIDIGAPVVNWARKSAL
                     WPMTFGLACCAIEMMATGAGRFDIDRFGAGVFRPSPRQSDLIIIAGTVTLKMGPVVRR
                     VYDQMPEPKWAIAMGACASTGGPFDSYSTMQGVDRTIPVDVYIPGCPPRPEALLYGLM
                     RLQDIIMREAPSAYIFESDGSVRRRRTFDEIEPPKLAPAPEKSEAAA"
     gene            1247..1879
                     /locus_tag="VIT19_11050"
     CDS             1247..1879
                     /locus_tag="VIT19_11050"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839563.1"
                     /translation="MSQLRTISLSIRSHRLVRAMTALILILAGGLNLVACSRSAVADK
                     SGEPISWNVKIVSNNEPGEPLIVSGTIYSPDGKQPLEGITLFVYQTDATGVYTTSGGD
                     NRATRIHGVMRTNAQGKYEFRTIKPGSYPNSRNPSHIHAYVSGPGYPEYWIDEYHFSN
                     DPFISDDDKRRASGQGTFSPILSPTRGADGILRAVRDIRIERCTRNCTGR"
     gene            1942..3054
                     /locus_tag="VIT19_11055"
     CDS             1942..3054
                     /locus_tag="VIT19_11055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839564.1"
                     /translation="MRFLVITAFLVVGASVAMAHPPWGIVVSSTGIVYFTDLETVWKI
                     DRDGKKSVFRSSVGGRHVHELAIDDQDNLYGPDYIYEPSTEKYFLGVWKMTPDGKETV
                     LQPPIDTVMSGVSIFRDRAGNMYSIDQNNHTKERTLLLRRSPSGIVSTLAGGAYGQKD
                     GKGTAARFGSVSAMTLAPDGSIYLTDALSVRRVSLDGTVTTVATNLAARTSQDKPTLF
                     GGMDASIMGLAVGSDGAVYVADAGNRRLLKIGSDGKASVVYRLEPPYFPTGVFATRSG
                     DVYVLEFSFTPPGTTNNPSVRKISSDGQYTLIASASPTAACGTVEPPRSRIRALLANV
                     IGFVNRRGAFFVLGVVGVLVTVVALVWRRRHRTQRA"
     gene            3051..3533
                     /locus_tag="VIT19_11060"
     CDS             3051..3533
                     /locus_tag="VIT19_11060"
                     /inference="COORDINATES: protein motif:HMM:NF025734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding domain-containing protein"
                     /protein_id="HEY5839565.1"
                     /translation="MKQTLLRILKWVAIVLALAVVGIQFVRPARTNPPLEPSQTLEAH
                     TQMTPEVAKIFERSCNDCHSNRTTWPWYTNVAPVSWWTIDHVNHGRSHLNYSEWGKLP
                     RPDQEKSLQEICDEVFDGKMPLPSYLPMHPQARLSEADKKVLCDWSEAERQRMAAQPR
                     "
     gene            3726..4502
                     /locus_tag="VIT19_11065"
     CDS             3726..4502
                     /locus_tag="VIT19_11065"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5839566.1"
                     /translation="MTERDNGKLGQPHSTEATGAAVAAAQATSLLIIEDDENISSAIQ
                     EYFTRAGYSVTTAADGLAGVEAAGKDRPDVVVLDLMLPKMDGLAVCKELRLKSPQMPI
                     LMLTAKDDVVDKVLGLEMGADDYITKPFSLRELEARIKSVLRRSRAGTAVEGEDEAPI
                     LRGNLRIDPIRREVTIGDRHVELTPKEFDLLRLFASNPGRVFPRKYLLEKIWDYSYEG
                     YDRTIDSHINRLRAKVEQNPDNPQLVLTVWGIGYKFTDAE"
     gene            4597..6255
                     /locus_tag="VIT19_11070"
     CDS             4597..6255
                     /locus_tag="VIT19_11070"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEY5839567.1"
                     /translation="MKSTENSAWHRTAYRSLSVALCFLLSCTVVAAQASTEPPPDRGV
                     LAWVLDNYIFTLVLVGGFVALIVYRLRRSRTSDAFASAPEPRPVQLPREMPAQESRKS
                     PAPSSPTQESDHQPRTRAPKETAAPDPAQSAFGAYRIDQEVGKLVLGKPHRMDVMASR
                     VSDDRRAIEASLIKALSAADIDDAGRERARRALEDYGFVARQCALMLQGRDAWERSSA
                     SRVLGQISSIASLPALVEALHDADSVVRNQAVTSLGQLKQPAAIGALLDIARRHSDIP
                     PALLSESLTACSVADLSFLDSAPFDFNEPQPNVDGGPQEVDLMLSSEQLPMGDEDDAL
                     LGLLTRLESSDTGERAQVARELASHRAQRSVSALCSTAMHDPDPSVRAAAVAGLGNID
                     HESVFAPVLISLADDTREVRAAAARSLSSLHFDRAEAYARVMKSADPQTLQTFAQACV
                     KTGIAAQAVDRLASEDRRHAQEAFALFSVLAKAGEVQPILEIIETHHDVQVKLAAVRV
                     LSVAGNSGAAPKLRELVATEGMPEDVRTSILELLYKFDKEPAAV"
     gene            6340..>7916
                     /locus_tag="VIT19_11075"
     CDS             6340..>7916
                     /locus_tag="VIT19_11075"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEY5839568.1"
                     /translation="MSTANQSSLPRVLGLITALVCCAAAVVFTASPVGLSQSRIIAPQ
                     RSANTNNSTKRPPVATLRASDSTNGSRVALTSNQSLNDYEAYRRGDRFYVRIPAADVP
                     RPEAVRGRAFGDVKVQRGASDTVVSFRMQPGATARVEQRGNKLDVVFTMPGSRSGTTP
                     STGRDVAGNDAGPAPPAADSQRRGNTNSNRLGPADRAGNRNSNDRSSAASARATPTPR
                     ATPSPKPSPTPSAKPSASPTATPRVSPFVAQQRSSPSPTATAASSQTTAQGLTWNNMK
                     QRARYWILLAQLNPIPVGIGVAVLLLLIGLLVMQRRRAKALRRSRPRKSPVKSAVLAA
                     EKVSPVAVEPQPVEPLQTGAELAGATAAVAAVTVEPPPQPAPPATDAQHERVTRASEE
                     VKTLMAGGDYDKSIIASDDRYTRQLVGAELLSALVGRNLQRRERARAAFMNHGYFDDA
                     TRDLRIAESPNERAAAARRLSFVHDREATPHLIAALEDSSPDVRRASVEALMDLRDPA
                     AIAPLNSLMQTETDRRVP"
BASE COUNT         1679 a         2320 c         2258 g         1659 t
ORIGIN      
        1 ggcgggccat cgacggcgta tctgccggtg atgatctttt tcgttgttgc gatcatcttt
       61 ccggtgctgc ccatcgtcct cggccggttc ctgcggcctt acaaatatca gaaagacaag
      121 atgcggccgt acgaatgcgg catcgatccg gaaaccggcg cgcatgatcg cttcaccgta
      181 cggttctata tcatcgcgat gctatttttg atcttcgacg ttgagacgat ctttttgctg
      241 ccctgggcga tcatcttcat gggcgacgat ttctcgttca caaagttcgc gctgatcgaa
      301 atgttcgtct tcattggaat tctggtagtt ggttattact acgcgtggcg caaaggcgcc
      361 ctggaatggg cttaagaaag tttcgagttc cgagtttcgg gtttcgagtt aaaaactcag
      421 catcggcgag acaaactcga aactctgaac tcgaaactcc gaaactgctg aaagcagaaa
      481 ctgctgaaag ccatggctga acacgacgaa ggattcgtcc tcaccacagt tgattcgata
      541 acgaattacg tccgacgctc aatcgcggcg aaagccatcg atatcggcgc gccggtcgtg
      601 aactgggcgc gaaaatctgc gctgtggccg atgacttttg ggctggcctg ctgcgcgatt
      661 gagatgatgg ccaccggcgc ggggcgcttt gatatcgatc ggttcggcgc cggagtgttt
      721 cgtcccagcc cacgacaaag cgacctgatc atcatcgccg gcacagtaac tttaaagatg
      781 ggaccggtcg tgcgtcgtgt ttatgaccag atgccggaac cgaagtgggc gattgcgatg
      841 ggcgcgtgtg cgtcaacggg tgggccgttc gactcgtatt cgacgatgca aggcgtcgat
      901 cgaacaattc cggttgatgt ttacattccc ggctgcccac cgcggcctga ggccctgctt
      961 tacggcttga tgcgcctgca agacatcatc atgcgcgaag ctccttccgc atacatattc
     1021 gagtcagacg gttcagtccg gcgtcgccga acattcgacg aaattgagcc gccaaagctt
     1081 gctccagctc ccgagaaatc agaagccgcc gcttagtggc aaccgctccc ctccgggcga
     1141 cgcgtcagtc ttaacaactc tttacaatca actccgatcg cgatggctac gcgtaacgta
     1201 cacttcagca tctgaattag gcagctatca gcaggaggaa cggaagatga gtcaattacg
     1261 aaccatctcg ttatcgattc gcagtcaccg cctcgtccgg gcaatgacgg cgctgatcct
     1321 tatcctggcg ggcggcctca acctggtcgc gtgttcacga tcggcggtag ctgacaaaag
     1381 cggagagccg atatcgtgga acgtcaaaat cgtttcgaac aacgaaccag gcgagcctct
     1441 gattgtttcc ggcacaatct actctcctga cggcaaacag ccgttggaag gaatcacgct
     1501 tttcgtttat caaaccgacg cgaccggggt ttatacgacc agcggtggcg acaatcgtgc
     1561 tacgcgtata cacggcgtca tgcgcacgaa cgcgcagggc aaatacgagt tccgcactat
     1621 taaacccggc tcttacccga acagtcgcaa cccgtcacac attcacgcct atgtttccgg
     1681 tccggggtat ccggaatact ggatcgatga atatcacttc agcaacgacc ctttcattag
     1741 cgatgatgac aaacgaagag cgagcggtca gggaaccttc tctccgatct taagtccgac
     1801 acgtggagcg gatggcattc ttcgcgcggt gcgcgacatt cgcatcgaac gctgcacgag
     1861 aaactgcacg ggaagatagt cgctggctgt taattaagag ttcgtgcgct tcgcatgctc
     1921 gcttttactt tcccaagcgt tttgcgcttc ctcgtaatca cggccttcct ggtcgtggga
     1981 gcgtcggtgg cgatggctca tccgccgtgg ggaattgttg ttagctctac gggaatcgtc
     2041 tatttcaccg acctcgaaac cgtttggaaa atcgatcggg atggaaagaa gagcgtcttc
     2101 cgctccagcg ttggcggccg ccacgtccac gagttggcga tcgacgacca ggacaatctt
     2161 tacggccctg attacattta cgaacccagc actgaaaagt attttcttgg cgtctggaag
     2221 atgactccgg acggtaaaga gactgttctt cagccgccga tcgacaccgt catgtccggc
     2281 gtgagtattt tccgggatcg cgccggcaac atgtattcga tcgatcagaa caaccacacc
     2341 aaagaacgaa ccctcctttt gcggcgctcg ccgagtggca tagtttcaac gttggccggt
     2401 ggagcctacg gccaaaagga tggcaaaggt acggcggcaa gattcggaag cgttagcgca
     2461 atgacgcttg cgcccgacgg aagcatttac ttaaccgatg ctctttcggt gcgccgcgtc
     2521 tcgctggacg ggactgtaac aactgtcgcg acgaacctgg cagcgagaac ttcacaagat
     2581 aaacccacgc tgttcggcgg catggatgca agcattatgg gtttggcagt tggttccgac
     2641 ggcgcggtct atgtcgcgga cgccggcaat cgccggttgc tgaagattgg aagtgacggg
     2701 aaggccagtg ttgtttatcg tctggagccg ccgtactttc ctaccggtgt cttcgctacg
     2761 cgcagcggcg atgtttacgt tctcgagttc agtttcacgc ctccgggcac aactaacaac
     2821 ccgagcgtgc gcaagatctc atctgacgga caatacacac taattgcttc cgcgagtccg
     2881 acagcagctt gcggtaccgt cgagccgcca cgctcacgta ttcgggcgct cttggcaaac
     2941 gtcatcggat ttgttaatag gcgcggtgca ttcttcgtct tgggagtagt aggagttctc
     3001 gttacagtgg ttgctctcgt ctggcgccgt cggcacagaa ctcaacgcgc atgaaacaaa
     3061 cactgcttcg aattttaaaa tgggtagcga ttgtcctggc gctggcggta gtcggaattc
     3121 aatttgtgcg tccggcgcgg acgaatccgc cgctcgagcc atcccaaacg cttgaggcgc
     3181 acacgcagat gactcccgaa gtcgcaaaga tctttgagcg atcatgcaac gactgccact
     3241 caaacagaac gacgtggccc tggtacacga atgtggcgcc ggtctcgtgg tggacgatcg
     3301 atcacgtaaa tcacggtcga tctcatctga attattcgga gtggggcaag ctgccccgtc
     3361 ccgaccagga gaagagctta caggagatct gcgacgaggt ttttgacggc aaaatgccct
     3421 tgccttcgta tttgccgatg catccacagg cccgcttgtc agaggcggat aaaaaggtgc
     3481 tttgcgactg gagtgaagcg gagcgccagc gaatggccgc ccaacccagg taatcttgcg
     3541 atcctaaaat ccattctccc ccaaagaaca tacgcaaccc tgcgtggggc atcgcagagt
     3601 accaatttgt gtcagcctgc taaattaggg cttgagtcgg ggagtacctg cctgctatat
     3661 tcggttgggc gcgcccccag gcgcggactt gccgaacccc cttctcgcct tcgggaaact
     3721 gggaaatgac agaaagagat aacgggaagt tgggtcaacc tcattcaacc gaagccacag
     3781 gtgcagccgt ggccgccgcg caagcaacct cacttctgat cattgaagac gacgaaaaca
     3841 tttcgagcgc cattcaggaa tatttcactc gcgctggcta cagtgttaca accgcggccg
     3901 atggtttggc cggagttgaa gcagccggca aggacagacc tgacgtggtc gtgctcgatt
     3961 tgatgttgcc aaagatggac ggtctggccg tctgcaaaga gcttcgtctc aaaagtccgc
     4021 agatgccgat tctaatgctg acggcaaagg acgatgtggt cgacaaggtg ctgggcctcg
     4081 aaatgggcgc cgacgattac atcaccaagc cgttcagcct gcgtgaactg gaagcacgaa
     4141 ttaagtccgt gctacgccgg tcgcgcgcgg gaacggcggt tgagggcgaa gacgaagcgc
     4201 ccatcctccg tgggaatttg cggatcgatc caatccggcg cgaggtgaca attggtgacc
     4261 ggcacgttga actcacccca aaagagtttg acctgctgcg attgttcgca tcgaatcccg
     4321 gccgcgtctt cccgcgaaag tacctgctcg aaaagatttg ggattactcc tacgaaggct
     4381 acgatcggac gattgattct cacatcaacc ggctccgcgc aaaggtcgag cagaacccgg
     4441 acaatcctca gctcgtgctg accgtctggg gtattggcta caagttcacg gacgccgaat
     4501 agcccggtcc gttcttcact tcaaaagtct tgcccgcgaa ttgagccgaa tccatcgcgc
     4561 tctttcaatc ctgacgcaag cagaaagacc cgcaccatga agtccacaga aaattccgcc
     4621 tggcatcgca cggcatatcg ctctctgagc gtggcgctgt gcttcttgtt gtcctgcacg
     4681 gttgtcgctg cgcaagccag cactgaacca ccgcccgacc gtggtgtatt agcgtgggtg
     4741 ttggacaact acattttcac cctcgtgctt gtcggtggat ttgtcgcgtt aatcgtgtat
     4801 cgcctccgga gatcgagaac ctcagatgcg ttcgcgagcg ccccggagcc gcgccccgtc
     4861 caactaccgc gagaaatgcc ggcgcaagag agccgaaagt cccctgcccc ttcatctccc
     4921 acgcaagaat cagatcatca gccgcgcaca cgcgcgccca aagagactgc ggcgccagat
     4981 cctgcgcagt cagcattcgg cgcgtaccgc atcgatcagg aagtcggcaa gctcgtgctt
     5041 ggcaagccgc accgtatgga cgtaatggcg tcgcgcgtgt ccgacgatcg tcgcgcgatc
     5101 gaggcttcat taatcaaagc gttgtccgcg gccgacattg acgatgccgg tcgcgagcgc
     5161 gcgcgccgtg ctttggaaga ttacggattc gtcgcgcgcc aatgcgcgct catgctgcaa
     5221 ggccgcgacg cgtgggagcg ttcgtcggcg tctcgcgtac tgggccagat cagttctatc
     5281 gcgtcgttac cggcgctggt tgaagctttg cacgacgcag attcggtcgt cagaaaccag
     5341 gccgtcacaa gcttaggtca attgaaacag cccgccgcga tcggcgccct gctcgatatc
     5401 gcgcgccgcc actcagacat tcctccggca ctcttgagcg agagcctgac tgcgtgctcg
     5461 gtagctgacc ttagcttcct ggattcggcg ccgttcgatt tcaacgaacc acagccgaat
     5521 gtggacggcg gaccgcaaga ggttgatttg atgctctctt ctgagcagtt gccgatgggt
     5581 gatgaagacg acgcgttgct gggattgttg acgaggctgg aaagttcgga caccggcgaa
     5641 cgcgcacaag tcgcccgcga actggcttct catcgggcac agcgctcggt gtcggcttta
     5701 tgctctaccg caatgcacga tcccgatcca agtgttcggg cggctgcggt ggcgggcctg
     5761 ggcaacattg atcacgaatc agttttcgcc ccggtgctca tctccctcgc cgatgacact
     5821 cgtgaagtgc gtgccgccgc agctcgcagt ttatcgagtc tgcactttga tcgcgcggaa
     5881 gcctacgccc gggtgatgaa atccgctgac ccgcaaactc ttcaaacctt tgcgcaagcg
     5941 tgtgtgaaga caggtatcgc tgcgcaggcg gttgaccgcc tggccagcga agaccggaga
     6001 cacgcgcagg aagcgtttgc gctcttctcg gtgctggcca aagccggtga agtgcagccc
     6061 atccttgaaa tcatcgagac gcatcacgac gttcaggtga agctcgccgc cgtgcgcgtg
     6121 ttgagcgtgg ccggcaattc gggtgcggcg ccaaaactcc gggaattagt ggccacggaa
     6181 ggaatgccgg aagatgttcg caccagcatt ctcgaactcc tctacaagtt cgacaaagaa
     6241 cccgccgcag tctaaacgca agtgacaacg ttcccacgga cgttgcataa ttccctctgc
     6301 gaagtcgttc gcgtttctca tttgacgccg ccccaattca tgagcaccgc caaccaatcc
     6361 tcattaccgc gcgttctggg cctgatcacg gccttagtct gctgcgcggc agccgtggtg
     6421 tttactgctt cgccggtcgg gttgtcgcag agtcgcatca tcgcgccgca acgttcagcc
     6481 aacactaaca actcaaccaa acgaccgccc gtggctactt tgcgcgcgag cgattcaacg
     6541 aacggctcac gggttgctct gacgtccaat cagtctttga acgactacga agcgtatcgc
     6601 cgaggcgatc gtttctacgt gcggattccg gcggctgatg tgccgcgacc ggaagctgta
     6661 cgcggtcgcg cgtttggcga tgtcaaggtg caacgtggcg ccagtgacac agttgtttct
     6721 ttccggatgc agcccggcgc aaccgctcgg gtcgagcagc gcgggaacaa gctcgatgtg
     6781 gttttcacca tgcccggttc gcgctcaggt actacaccat caacgggtcg cgacgtggcg
     6841 ggcaacgatg ccggaccggc gccacctgcg gccgattcgc agcgacgcgg aaatacaaat
     6901 tcaaacaggt taggtccggc ggatcgtgcg ggcaatcgaa attcgaacga tcgatcttct
     6961 gctgcatcag cccgagcgac gccgacgcca cgcgcgaccc cgtcgcctaa gccttcaccg
     7021 acgccttcag ctaagccgag tgcgagccca accgccacgc cgcgagtttc accgttcgtc
     7081 gcgcagcaaa ggagttcgcc atcccccact gctaccgcgg cttcgtcaca aacaaccgcc
     7141 caggggttga cctggaacaa catgaagcag cgcgcgcgct actggattct tttggcgcaa
     7201 ctgaacccga ttcccgtcgg catcggcgtc gccgtacttc tgctgctgat cggattgctc
     7261 gttatgcagc gtcgtcgtgc gaaagcactg agacgaagcc ggccgcgcaa atcgccggtg
     7321 aagtccgccg tcctcgctgc cgagaaggtt tcacccgtcg cggtcgaacc tcagccggtt
     7381 gagccactgc aaaccggggc cgaattggct ggagcgactg ccgccgtcgc ggccgtgacc
     7441 gttgaaccgc cgccgcaacc cgcgcctccg gcgactgacg cccaacatga acgcgtgaca
     7501 cgtgcttctg aagaagtgaa gacactgatg gccggcggcg attatgacaa gagtattatc
     7561 gcttcggacg atcgctacac gcgccaactg gttggggctg aattgctgtc ggcgctcgtc
     7621 ggccggaatc ttcaacgtcg cgagcgtgcc cgcgcggcgt tcatgaatca cggctacttt
     7681 gacgatgcca cgcgcgattt gcgaattgcg gagtcaccta acgagcgggc tgcggccgcg
     7741 cgccggctca gcttcgttca tgatcgcgaa gcgacgccac atctgatcgc ggcgcttgaa
     7801 gactcttcac ctgacgtgcg acgggcgtcc gtcgaagcgc tgatggactt gcgtgatccg
     7861 gcggcgatcg ctccgctgaa ctcgctcatg caaacagaaa cagatcgacg agtgcc
//
LOCUS       DATDBY010000590         2512 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1216814, whole genome shotgun sequence.
ACCESSION   DATDBY010000590 DATDBY010000000
VERSION     DATDBY010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1216814"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VIT19_11080"
     CDS             <1..283
                     /locus_tag="VIT19_11080"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY5839569.1"
                     /translation="RLRACARLIGSERSALAQPARLDATFDQQVRQFESTLIRQALEE
                     ANGSVTRAARTLGLTHQGLCYIINHRHQSLLSARAPIRVRRKPVIKKHK"
     gene            649..1206
                     /locus_tag="VIT19_11085"
     CDS             649..1206
                     /locus_tag="VIT19_11085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839570.1"
                     /translation="MTVLVSIAATGCNSSLYKVKSPEALARMPATAATADVGSVTFRA
                     APLLTDEETQELFEANLQLAGLLPVRLEARHNGGEPLLLNKLKFKLHDGSGNEWKLLS
                     GKQAVSHILKANDVFLYNPHSRKTFEKEFRAYDFDLKAPLTHSERQRQGLIIFLAPQK
                     EPVASPHGVTLSIEGLAQPVSLKLN"
     gene            1494..>2512
                     /locus_tag="VIT19_11090"
     CDS             1494..>2512
                     /locus_tag="VIT19_11090"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5839571.1"
                     /translation="MAPEAQAGKQPTPALLFDTLNAYQRTLALKAGIDLEVFTAIAEG
                     KATAKEIADRCAASEKGTRVLCDYLTIMGFLTKENGRYGLTPDSAVFLDKRSPAYMGT
                     VSDFMLSPHIKGNFDNLTESVRKGGSAGSAESLEPEHPVWVEFARAMAPMMAMPAELL
                     AQLVDPAKDQKLRVLDIAAGHGLYGIAFAKQNPQIEVTAVDWPNVLELAQQNAEGAGV
                     AERFQMNPGSAFDVDYGTDYDLVLLTNFLHHFDAATCEMLLKKVRAALKDGGRAATLE
                     FVPNDDRVTPPQAAAFSMQMLGGTPSGDAYTFAELDQMFSNAGFARSEMHELPPSIQR
                     VVISY"
BASE COUNT          565 a          706 c          711 g          530 t
ORIGIN      
        1 tcgtttgcgc gcgtgtgctc gacttatcgg gtccgaacga tctgccctcg cgcagccggc
       61 gcggctcgac gccacctttg atcaacaggt gcgtcagttt gaaagcacac tgattcgcca
      121 ggcgttggaa gaagctaacg gtagcgtcac ccgcgcggcg cgcaccctgg gattaacgca
      181 ccagggactg tgctacatca tcaatcaccg acatcagagc ctgctcagcg cgagggcgcc
      241 aattcgcgtg cggcgcaaac cggtaatcaa aaagcacaaa tgaaggggac gacgagcacg
      301 ggggccggtt gccgcggtcg ggggcggccg cagtgcctcc tgctacgatc gtgcatggct
      361 ttgtgctacg cggggtttct ctattgacag caaagcttgc atagcttaaa ggccgccgcg
      421 agttctcacc cttcgaaaac cggggaggcg gcggcgtaag ccgccgaaca gcaatcatca
      481 tcgctgatct ccgtaggtgc ccacatggcg gcgggctgaa aagtcccgcc gcattttttt
      541 gttcaattga cttcaacgga tctggcaagg caacattcac cgcacgtgaa cgaccgaaga
      601 aactatcgtg aaagttggct cccgctacgg cgttgtgtca cgactctctt gactgttctg
      661 gtttcgatcg cagcgacggg gtgtaattcg agtctttaca aagttaagtc tccggaagcc
      721 ctcgcgcgga tgcccgcgac cgcggctacg gcagacgtcg gttcggtcac tttccgcgcg
      781 gctccgctgc ttacggatga agaaacccag gaactgttcg aagcgaatct gcaactggcg
      841 ggattgcttc ccgtgcgtct tgaggccagg cacaatggtg gtgagccgtt gctgctgaac
      901 aaactgaagt tcaagttgca cgatggctcg ggcaacgaat ggaaattgct ttcgggaaaa
      961 caagccgtct cgcacatcct caaagcgaat gacgtatttc tctacaatcc gcattcacga
     1021 aagacattcg aaaaagagtt tcgcgcctac gacttcgatt tgaaagctcc gctcacacat
     1081 tccgagcgtc agcggcaggg attaataatc tttctcgctc cgcaaaagga accagttgcc
     1141 tcgccgcatg gcgtaacgct ttcgattgag gggctggccc aaccggtttc gctaaaactc
     1201 aattagtgtc gatctcattc acacctcgct tcagcgaggt gtcagggcct ccatccaaat
     1261 ccaggtaacc gtttccaacg gttttgtttg tgaaagccgt tgaaacggct gtgtcatcat
     1321 gacggcgttg tcacctcgct gaagcgaggt gtgaatgaaa atttcactgc acgattcgcc
     1381 aatcgacaaa tgctttccca acgctggtgg agttgcggcc gttagacttt cgcgccgcca
     1441 ttcagttagg ctttcggttt cttgatcatc ttcgttaaga ggaaacctaa atcatggctc
     1501 ccgaagcaca agcaggaaaa caaccaaccc cggcattact attcgacacg ctgaacgcgt
     1561 accagcgaac actggcgctg aaagccggca tcgatctcga agtcttcact gccatcgctg
     1621 aaggcaaagc gacggcgaag gaaattgccg atcgctgcgc cgcatccgaa aagggcacac
     1681 gcgtcctgtg cgactatctg acgatcatgg gatttctgac gaaggagaat ggacgctacg
     1741 gtttgacgcc tgactccgcg gtgttcctcg acaagcgctc gcccgcgtac atgggcacgg
     1801 tcagcgactt catgttgtcg cctcacatca aaggcaattt cgacaatcta actgaatctg
     1861 taaggaaagg cggatcggcg ggctcagcag aatcgctcga gcctgagcat ccggtgtggg
     1921 ttgaattcgc gcgcgcgatg gcgccgatga tggccatgcc ggcagagtta ttggcgcaac
     1981 tggtcgatcc agcgaaagac cagaagctgc gcgtgctgga tattgccgcg ggccatggcc
     2041 tgtacggcat agctttcgca aaacagaatc cgcagattga agtcaccgcg gttgattggc
     2101 ccaacgtgct ggagcttgcc caacagaacg cggaaggcgc gggtgtcgcg gaacgcttcc
     2161 agatgaaccc cggcagcgcg ttcgatgtcg attacggaac tgattatgac ttagtgctgc
     2221 tgacgaattt cctgcaccac tttgacgcgg cgacgtgcga gatgcttttg aagaaagttc
     2281 gtgccgcgct gaaagacggt ggacgcgcag cgacgctgga attcgttccc aacgatgacc
     2341 gcgttactcc gccgcaagcc gcggccttca gcatgcagat gctcggcggt acgccttcag
     2401 gcgacgctta caccttcgcg gaactcgatc agatgttcag caacgccggc ttcgcgcgca
     2461 gcgaaatgca cgagctgccg ccgtcgattc agcgagttgt gattagttat aa
//
LOCUS       DATDBY010000591         4578 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2519754, whole genome shotgun sequence.
ACCESSION   DATDBY010000591 DATDBY010000000
VERSION     DATDBY010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4578
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2519754"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(217..735)
                     /locus_tag="VIT19_11095"
     CDS             complement(217..735)
                     /locus_tag="VIT19_11095"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEY5839572.1"
                     /translation="MSKLSLSLIVLVLCFGGAAAAQQPAVVADEPLKPVTGKADLYPA
                     GVDAKQKIETTLKTAAAENKRVILIFGGNWCYDCHVLDQALHEGEAAKIVKESFLLVH
                     VDIGEGDKNLDLIKKYETTLGSGVPTVVIIDGEGRVVYSSTKGEFEAARRIMKKDLVA
                     FLNQWKPTGARP"
     gene            complement(745..2463)
                     /locus_tag="VIT19_11100"
     CDS             complement(745..2463)
                     /locus_tag="VIT19_11100"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family metallopeptidase"
                     /protein_id="HEY5839573.1"
                     /translation="MIKRFALFAGLLSTVVLLVIACQPVTENRPTETGSTATMPAELK
                     SGLDTITTADLMQHTKALSADEYEGRGPGTKGEELTVKYLTDQFQRLGLKPGNPDGTY
                     VQKVPLAGFTGQPTASFTAGGKKIDLKFPEDYVAVSRRFVAQSKVENSDMVFVGYGVV
                     APEYGWDDYKGLDVRGKTVVMLINDPAVPDPNDASKLDEKIFKGKAMTYYGRWTYKYE
                     IATEKGAAAAIIIHETGPAGYPYEVVSGSWSRENFDIVRPDKNMNRVAVESWITTDRA
                     KELFTAGGQDFDALKKAAVSKDFKPVELKAKANITVNNTLREIQSNNVIGKIEGAEKK
                     DEYVVYSAHWDHLGLDPKLQGDQIFNGALDNASGIAAMLEIAEGFTKLGTPPKRSILF
                     LAVTAEEKGLLGAKYYGENPLYPLNKTLANINMDGVNQWGRTKDITMVGDDNSTLIDL
                     LREVSKMQTRVVNPDPEPEKGFYYRSDHFEFAKQGVPALYTDSGIDYIGKDPAFSKQK
                     REEYTAKDYHKVSDQIKPDWDLAGAVDDAQLLMIIGHRISQTDTFPTWKSGSEFKAKR
                     DAMMGG"
     gene            2642..>4578
                     /gene="carB"
                     /locus_tag="VIT19_11105"
     CDS             2642..>4578
                     /gene="carB"
                     /locus_tag="VIT19_11105"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: protein motif:HMM:NF003671.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEY5839574.1"
                     /translation="MPKRTDIHKILIIGSGPIVIGQACEFDYSGTQACKALRQEGYQV
                     VLVNSNPATIMTDPAMADSTYIEPLTVESVAAIIKKERPDALLPTVGGQTALNLAIAL
                     DDAGVLKEFGVEMIGAKREAIKVAEDRLLFKAAMDEAGMLMARGGFAKTWAEAEAIVK
                     ITDYPAIIRPSFTMGGTGGGIAFNPEEYEDIVRAGLAASPIQEVLIEESILGWKEFEL
                     EVMRDLADNVVIICSIENFDPMGVHTGDSITVAPAQTLTDREYQSMRDMAIKIIRKVG
                     VETGGSNIQFAVNPENGEIRVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDE
                     IPNDITKKTPASFEPTIDYVVTKIPKWNFEKFQEAEDVLGTQMKSVGEVMAIGRTFKE
                     SLFKGLRSLEAVTPLRLEDVPNDELQRKLARPNSQRFSYITYALEHDWTIDEIHRLSR
                     IDPWFLDQLQQVMEIQREVEAVPGYAVVPTASDDQISSRDESVPKLENIPLDLLRAFK
                     EAALSDRRLAYLTQRSEDEVRAYRKSLGLIPVYKRVDTCGAEFESFTPYLYSTYEEED
                     ESQPTDKPKIMILGSGPNRIGQGIEFDYCCVHASYALHEAGYETIMVNCNPETVSTDY
                     DTSDRLYFEPLTFEDVMNIVDV"
BASE COUNT          999 a         1307 c         1229 g         1043 t
ORIGIN      
        1 gaaactattg agactgcgaa tatgagagac gcaaaaagaa ataatctgaa cttcattaac
       61 tactccctta attgatcgat tgaattattt tgtggggaac cgaagcagga aactaccaaa
      121 aagcgcgacg ttactcaaga acgcgggcgc gaagaaaggg gcactagccc gaccgtaagg
      181 gagggcgttt ccaacacaca acacaaacgt cctcccttac ggtcgagctc ccgttggctt
      241 ccactgattc agaaacgcca ccaaatcttt cttcattatc cttcgggccg cttcaaactc
      301 gcccttggtg ctgctgtaaa cgacgcgacc ctcgccgtca attatcacaa cggtcggcac
      361 gccagagccc agcgtcgtct cgtatttctt gatcaggtcg aggtttttgt cgccttcgcc
      421 tatgtccacg tgcacgagca agaaactttc cttgacgatc tttgctgctt cgccttcgtg
      481 cagcgcctga tccagcacgt gacagtcata gcaccagttg ccgccaaaga tcagtatcac
      541 gcgtttgttt tccgcggccg ctgtcttcag cgtcgtctcg atcttttgct tcgcatcaac
      601 acccgcagga tagagatctg ctttgcctgt gactggcttc agcggttcat cggctacgac
      661 cgccggctgc tgcgccgcgg cggccccccc gaagcacagc acaagaacga tcagagaaag
      721 tgagagtttg ctcatcgtct ttagctaccc acccatcatc gcgtcacgct tagctttgaa
      781 ttcgctaccc gacttccacg tgggaaacgt gtctgtctgc gagatgcggt ggccgatgat
      841 catcaacagt tgcgcgtcgt caacggcgcc ggccaggtcc cagtccggct taatctggtc
      901 cgaaactttg tgatagtcct tcgccgtgta ttcctcgcgc ttctgcttgc tgaatgccgg
      961 gtccttgccg atgtagtcaa tgcccgaatc cgtgtaaagc gcgggcacac cctgcttcgc
     1021 gaactcgaaa tgatctgaac gatagtagaa gcctttctca ggttccggat cgggattgac
     1081 aacgcgggtc tgcatcttcg aaacctcgcg caataggtca atcaacgtgc tgttgtcgtc
     1141 cccaaccatc gttatgtctt ttgtgcggcc ccattgattg acgccgtcca tgttgatatt
     1201 cgccaacgtc ttgttgagcg gataaagcgg gttctcgcca tagtactttg cgccgagcaa
     1261 gcccttctct tccgcggtca cggccaggaa aagtatcgag cgctttggcg gcgtgccgag
     1321 tttggtgaac ccttcggcga tttccagcat cgctgcgatg cccgaagcgt tatccagcgc
     1381 gccgttgaaa atctgatcgc cctgaagctt cggatcgagg cccaggtgat cccagtgcgc
     1441 cgaatacacc acgtactcgt ctttcttctc tgcgccttcg atcttgccga tgacattgtt
     1501 tgactgaatc tcgcgcagcg tattgttcac cgtgatgttc gccttcgctt tcagctccac
     1561 cggcttgaag tccttgctga cggcagcttt cttcaaggcg tcgaaatcct gacccccagc
     1621 cgtgaacagt tctttcgcgc gatccgtagt aatccatgat tcgacggcga cccgattcat
     1681 attcttgtcc ggccggacaa tgtcgaagtt ctcgcgcgac cagctccccg aaaccacttc
     1741 gtacggatag cccgccgggc cggtctcgtg aatgatgatg gcggcggcag cgcctttctc
     1801 agtcgcaatc tcgtatttgt aagtccagcg accgtagtag gtcatcgcct tgcctttgaa
     1861 gatcttttca tcgagcttcg aagcgtcgtt tgggtctggg acggccggat cgttgatgag
     1921 catgacgacg gtcttgccac gcacgtccag acctttgtaa tcgtcccaac cgtattcggg
     1981 cgcgacgacg ccgtagccaa caaacaccat gtcggagttt tcaactttcg actgcgccac
     2041 aaaacggcgc gagaccgcca cgtaatcttc cggaaacttc aggtcgatct tcttgccgcc
     2101 cgcagtgaac gaggcggtcg gctgcccggt gaatccggcg agggggactt tttgcacgta
     2161 cgtgccgtcg ggattgccgg gcttgagtcc caggcgctga aactgatcgg tgagatattt
     2221 gacggtcagc tcctcgccct tcgtgccggg cccgcgccct tcgtattcat cggccgatag
     2281 agctttcgtg tgctgcatca ggtcagccgt cgttatcgtg tcgagtcctg atttcaactc
     2341 agcaggcatc gtggccgtag agccggtttc agtcggccgg ttttcggtca cgggctgaca
     2401 cgcaatcaca agcaacacaa cggtcgagag taatcccgca aacagagcga atctcttgat
     2461 catttcaagc acctcagttg aatttttcca agcagaaagt ttctatgccg ttaggaggcg
     2521 caagtcaaat gtaggtgtgg cacgggcgtc ccgcccgtga acaacgcgca agatgcgcgt
     2581 gtcaccaccg ctgacggttc gcttcaaaca gatcggcgtg tagaatgttt gaccgtcttc
     2641 aatgcccaag cgcactgaca ttcacaaaat tctgattatt ggctcaggcc cgatcgtcat
     2701 cgggcaggcg tgcgaatttg actattcagg cacgcaagcg tgcaaggccc tgcggcagga
     2761 aggctaccag gtcgtcctcg tcaattcgaa tcctgcgacg atcatgaccg atccggccat
     2821 ggccgacagc acttatatcg agccgctcac cgtcgaatca gttgccgcga ttatcaagaa
     2881 agaaaggccg gacgcgttgt tgccgaccgt cggcggacag actgctttga atctggcgat
     2941 cgctttggac gacgccggcg tgctcaaaga gttcggcgtc gagatgatcg gcgcgaagcg
     3001 cgaagcaatc aaggtcgccg aagaccgcct gctgttcaag gcagcgatgg acgaagcggg
     3061 catgctgatg gcgcgcgggg gctttgccaa gacgtgggcc gaagccgaag ctattgtaaa
     3121 aatcaccgat tatcccgcga tcatccggcc atcattcacg atgggcggaa ccggcggcgg
     3181 cattgctttc aaccctgaag aatacgaaga cattgtccgc gccggtctcg ccgcttcgcc
     3241 gatccaggaa gttttgatcg aagaatccat cctcggttgg aaagaatttg agctggaggt
     3301 gatgcgcgac ctggctgaca acgtcgtgat catttgctca atcgagaact ttgatccgat
     3361 gggtgtgcac accggcgatt caatcacagt agcgccggcg caaacgctca ccgatcgcga
     3421 ataccagtcg atgcgtgaca tggcgatcaa gatcattcgc aaggtcggcg tggaaacggg
     3481 cggctcgaac attcaattcg ccgtcaatcc tgagaacggc gagattcggg tcatcgaaat
     3541 gaatccgcgc gtgtcgcgtt cttcggcgct ggcttcgaaa gcgactggtt ttccgattgc
     3601 caaaatcgct gcgaagctgg cggtcggcta cacgctcgac gagattccga acgacatcac
     3661 aaagaagacg cccgcgtcat tcgagccgac gattgactac gtggtcacga agattcctaa
     3721 atggaatttc gaaaagtttc aggaagcgga agacgtcctc ggcacgcaga tgaagtcagt
     3781 cggcgaagtc atggccatcg gccgtacttt caaggaatca ctcttcaaag gcctgcgctc
     3841 gttggaagcc gtgacgcctt tgcgcctcga agacgtgccg aatgacgagc tgcaacggaa
     3901 acttgcgcgg ccgaattcgc agcgcttctc gtacatcacg tacgcgcttg agcatgactg
     3961 gactattgat gaaatccatc ggctatcacg aatcgatccg tggtttttgg atcagcttca
     4021 gcaggtcatg gaaattcagc gcgaggtcga ggcggtccct gggtacgcgg tcgtcccgac
     4081 agctagtgat gatcaaatta gctctcggga cgagagcgta ccgaagctgg aaaacattcc
     4141 tttagatctt ctccgcgcct tcaaggaagc cgcgctttcc gatcgccggc ttgcgtatct
     4201 aacccaacgc agcgaagacg aggtgcgcgc ctatcgcaaa tcactcggcc tgattccggt
     4261 ttacaaacgc gtagatactt gcggcgccga gttcgaatcg ttcactcctt atctatactc
     4321 gacgtacgaa gaggaagatg aatctcaacc gaccgacaaa ccgaagatca tgattctcgg
     4381 ctcgggtccg aaccgcatcg gtcagggcat cgagttcgat tactgctgcg tgcacgcgtc
     4441 atacgccctg cacgaagcgg gttacgaaac gatcatggtc aactgcaatc cggaaactgt
     4501 ttcgacggac tatgacacgt cggatcgtct gtacttcgaa ccgctcacgt tcgaagacgt
     4561 catgaacatt gtcgatgt
//
LOCUS       DATDBY010000592         2762 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1490294, whole genome shotgun sequence.
ACCESSION   DATDBY010000592 DATDBY010000000
VERSION     DATDBY010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2762
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490294"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2571
                     /locus_tag="VIT19_11110"
     CDS             <1..2571
                     /locus_tag="VIT19_11110"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lamin tail domain-containing protein"
                     /protein_id="HEY5839575.1"
                     /translation="NTATVSSNTPDDTPANNSALEPTTVRTPADLSLSKSANDATPNV
                     GQQVTFTITVSNAGPYAATGVLVKDVLPAGLTYVSDDGSGSYTSGTGIWNVGTVNAGA
                     SATLHITALVTSTAVSGVTNTAEITGSDQFDPDSTVNNNNAGEDDQASATVTAKSADL
                     SLTKTVDDASPNVSQDVTFTVTLSNGGPDAATGVVVKDQLPAGLSFVSANPSQGTYTP
                     ASGIWSVGTVNPAASATLEITATVTSSGTITNTAEVTGSDVFDPDSTPNNNNVGEDDQ
                     ASRTISSLQADLSLTKTVDNATPNVGNQVIFTITLTNGGPDVATGVEVKDQLPAGLNF
                     DSAIPSQGTYTPATGIWVVGTLSSSATLQITATVTGTATITNTAEVTASDLSDPDSTP
                     NNHNAGEDDQVSSSITPKQADLSLLKSVNNATPDVGNNVIFTITLSNAGPDPATNVQV
                     TDQLPAGLSFQSASPSQGTYTPASGLWVVGTMNVSASATLQITATVTTNAPVTNTATI
                     TASDVFDPGGSNNSAGVTVTPKNADLSITKTDSPDPVAVGNDITYTITVTNGGPDAAT
                     SGVFSDTVPTNTTFRSITPPGGWTCGTTPAVGGTGAISCTNPSFAVGSGVFTLVVRVG
                     SAVADNTIISNTASISSNTFDPNIGNESATQTTTVRNPSVVISQVYAGGGNAGAQYLN
                     DFVEIFNRTGSAIDISTWSIQTATATGTTWTVTPLCPVSPCTIGPNKYYLVRLGSGGA
                     IGSALPTPDAIGSTNFAVTGGKAALVNNTTALSGSAAGTTPLGGATCPNVNTASVLDF
                     VGFGNATCFEGGAAAPALSNTTANLRGSSGCTDTNSNSANFATGAPNPRNSTSSFTCP
                     "
BASE COUNT          654 a          838 c          749 g          521 t
ORIGIN      
        1 aacacggcca ccgtctcgag caacacgccg gatgacacgc ccgcgaataa ctcggcgctc
       61 gaaccgacga ctgtgcgcac gccggcagac ttgtcgctca gcaaatccgc aaacgacgcg
      121 accccgaacg ttggccagca agtcaccttt acaatcaccg tcagcaacgc cggaccttat
      181 gctgctaccg gagtgctggt gaaggacgtt ttgcccgcgg gattgactta cgtttctgac
      241 gacggcagcg gctcgtacac gagcggcaca ggaatttgga atgtcggaac agtgaacgcc
      301 ggagcatctg cgacgctgca catcacagca ttggttactt ccaccgcggt aagcggcgtc
      361 acgaatacgg ccgagattac cggctcagat caattcgacc ctgattcgac ggtcaacaat
      421 aacaacgccg gcgaggacga tcaggccagc gcgaccgtca cggcaaagag tgcagacctg
      481 tctctgacga agaccgtgga tgacgcttcg ccaaacgtca gtcaggatgt aacgttcacg
      541 gtaactctta gtaatggcgg gccggatgcc gcgacgggtg tggtagtgaa ggatcaattg
      601 ccggcgggcc tgagctttgt atcggcgaac cccagtcagg gtacctatac acctgcgagt
      661 ggtatctggt ccgtgggcac ggtgaatcct gcagcgtcgg caactctgga aataacggca
      721 accgtgacgt cgtccgggac gattaccaac acggcggaag tcaccgggag tgatgtcttc
      781 gatcctgact cgacgccgaa caataacaat gtcggcgagg atgaccaggc gagccgcacc
      841 atcagttctc tccaggcgga tctctcgctg acaaagaccg tcgacaacgc gactcccaac
      901 gttggtaacc aggttatctt cactatcact ctcaccaacg ggggacccga cgtcgcgacg
      961 ggtgtagagg ttaaggatca attgccggcg ggcctgaact ttgactcggc aatccccagt
     1021 cagggtacct acacacctgc gacaggaatc tgggtcgtgg gaacactctc ctcgtcggcg
     1081 accctgcaaa tcaccgccac ggtgacaggg accgcaacca tcaccaatac ggcggaagtc
     1141 acagctagtg atttatccga tcctgactcg acgcccaaca atcacaatgc cggggaagat
     1201 gaccaggtca gcagcagcat taccccgaaa caggccgatc tgtctctgct caagtccgtc
     1261 aacaacgcca cgcccgacgt cggtaacaac gttatcttca ctatcactct ctccaacgcg
     1321 ggacccgacc ctgcgacgaa tgtacaggtt acggatcaat tgccggcggg cctgagcttt
     1381 caatcggcaa gcccaagtca gggtacctac acaccagcga gtggcctctg ggtcgtgggc
     1441 accatgaatg tctccgcgtc agcgacactg caaatcaccg caacggtgac aacgaatgca
     1501 ccggttacga atacggcgac aatcacagct agtgatgtct tcgatcctgg cgggtcaaat
     1561 aacagcgccg gcgtaacggt gaccccgaag aacgcggatc tctcaatcac gaaaaccgat
     1621 tcgccagatc cagtggccgt cgggaatgac attacctata cgatcacggt gacgaacggt
     1681 ggccccgacg cggccaccag cggagtgttt tcagacactg tgccgacgaa taccacgttc
     1741 cgatcaatca cgccacccgg cggctggacc tgcgggacaa cgccagccgt tggcggaacc
     1801 ggcgcgatca gttgcacaaa cccgagcttt gcggtcgggt cgggagtctt cacgctcgtt
     1861 gtacgagtcg gctcagcagt cgctgacaac acgatcattt ccaacacggc gtcgattagt
     1921 tctaacactt tcgatccgaa cattggtaac gagtcggcga cgcagactac gactgtgaga
     1981 aatcccagcg tcgtaatcag tcaggtgtat gcaggtggcg gaaatgccgg cgctcaatac
     2041 ctgaacgact tcgtcgagat ttttaaccgg acgggcagcg cgatcgacat cagcacctgg
     2101 tccattcaga ccgccacagc aacgggcacg acatggaccg tcactcctct ttgcccggta
     2161 agcccctgca cgattggtcc aaacaagtat tacctggtta ggttgggttc gggtggcgcg
     2221 ataggctccg cgctgccgac cccggacgcc attggctcaa ccaacttcgc tgtcaccgga
     2281 ggaaaggcgg cattggtcaa taacaccacg gccctgagcg gaagcgctgc tggaacgact
     2341 ccgttgggcg gggccacttg tccgaatgtc aacacggcca gcgtcctcga ctttgtgggc
     2401 tttggaaacg cgacttgctt cgaaggtggg gccgccgcgc cggccctatc caataccacg
     2461 gccaatctaa gagggagtag cggttgtacc gataccaata gcaactcagc caacttcgct
     2521 acgggcgcgc ccaatccacg caattccact tcaagtttta cctgtccgta aagcagcttg
     2581 accccgcgac tcgcctttct ccaatcggag tgttcatcaa agcttttgac actcaagtgc
     2641 gaccgggtca taagtcacgc tatcgttaag catggcccac actcctcttg taattcttct
     2701 gtacaggccg ccttatccca agcacgctta gtcataagaa aagcggaatg aaaatcttgt
     2761 tg
//
LOCUS       DATDBY010000593         5532 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1696764, whole genome shotgun sequence.
ACCESSION   DATDBY010000593 DATDBY010000000
VERSION     DATDBY010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5532
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1696764"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..624)
                     /locus_tag="VIT19_11115"
     CDS             complement(<1..624)
                     /locus_tag="VIT19_11115"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY5839576.1"
                     /translation="MRLFISLIICFMTALTITAQRPAIILEGQVVCCEECWAEADRTK
                     VEFGTAENLLKAKSCVEGGDPTLLAVREGDRFTLYQLAQGKFRLPGKNWLDFVGKRVA
                     VTGSVQTKKDTKIFQVDQLTVMAPSLAERESAKVLGTEVDLKLKDLSGAEQNLGSMKG
                     RIVVLNFWATYCIPCRKEMPDLAAIQNEYAALGVQVIGASTDEAADRA"
     gene            complement(1228..1701)
                     /locus_tag="VIT19_11120"
     CDS             complement(1228..1701)
                     /locus_tag="VIT19_11120"
                     /inference="COORDINATES: protein motif:HMM:NF025852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY5839577.1"
                     /translation="MKRFGLVIAVAFAVVGFAIGQNMGHSDHGFYQTADLKWTDGPPS
                     LPKGAKVALLEGNPAQDGPFTMRLHLPDGFKIQPHWHPAVEHVTVISGTFNLGMGEKF
                     DTSGGRALSAGSFAFMAPGMKHFAWAKGETVVQVHGMGPWKINYVNPADDPRNQK"
     gene            complement(1728..2723)
                     /locus_tag="VIT19_11125"
     CDS             complement(1728..2723)
                     /locus_tag="VIT19_11125"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5839578.1"
                     /translation="MFSVPAVAEDTVFVGSCAGIFYAFNKATGAVRWSYDIGKDGKQK
                     SFHGNPLITDDLILIGTDHNCVPDGIGHLYAFERSTGKVRWKYQTTSVPTDILRVGQS
                     VYFGSFQDNWYALNLRDGSLLWKFSTGAANESCDMIKAPVADDRHLYVAGLDGIVYSL
                     EAQSGRVVWKRKLPAVPSTGLALKDKMLFVGAGNNRIYRLNAETGTTVAELPIEAVPF
                     GRITLTADALLLFLDNRSERSGYVVTIDPDLKKIRWRQSSANWRSERPHAWGQLVVAG
                     NCRGEVAAFRASDGAPQWQLNLKGCISSIGSSEQRMFVGVQEGTLYAYELLSPKR"
     gene            complement(2724..2879)
                     /locus_tag="VIT19_11130"
     CDS             complement(2724..2879)
                     /locus_tag="VIT19_11130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839579.1"
                     /translation="MVPGIMKPKNFVSSIALLLALSNVSCAQRKPQAEQASLKSPLLA
                     WQYDTGG"
     gene            complement(2883..3752)
                     /locus_tag="VIT19_11135"
     CDS             complement(2883..3752)
                     /locus_tag="VIT19_11135"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5839580.1"
                     /translation="MKAISSAKSDPVDVNDSVLREWCESATYWEKHAQTIRTMFAPLT
                     QALIEEAGIRAGAHVLDVAGGPGEPSLAIAEVVRPSGSVMCTDVVAEMVAAAEREARR
                     RGLMNIEFRQTSADSLPFGDNTFDAAVCRLGVMFFPDSLAGVTEMLRVTKPGGKISFA
                     VWAKSELNPFSYVITNIVSRYIETPPADPNAPGAFRFAEPGALAQVLTQAGARNVTEK
                     ALRFYIEAPITPREFWEMRSQTSGTLREKLEALPKAQTKRIAEAVEESLGEFFPDNQM
                     KFPAEMLVSAGAK"
     gene            3832..4749
                     /locus_tag="VIT19_11140"
     CDS             3832..4749
                     /locus_tag="VIT19_11140"
                     /inference="COORDINATES: protein motif:HMM:NF040786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism-associated LysR family
                     transcriptional regulator"
                     /protein_id="HEY5839581.1"
                     /translation="MVTIVDYNALIVDVRGLEVFLSVAKHLNYTRAGEEVNLSQPSVS
                     VRIRQLEDELGTKLFEQLGKKVSLTEAGLVLIPHARRVITAVENAQAAIDELLGLERG
                     TLRIGASTTPGMYLVPQVIARFNDRYPKIEIHLGIKDTQQIEEAVIRNEFDFGFVGGH
                     LAGDEVDVFPWVTDRLVLIVAPNHPFAKKRSIRSDDLRNEKFVLRERGSATRAAISSR
                     LEISGLEINPVMEMENPESVKKAVQSGLGMAFISRFAVEAELKTRSLVAIRVRGFRID
                     RELKIVYRRDKHLGRAAKTFIEMARRFDS"
     gene            complement(4824..>5532)
                     /locus_tag="VIT19_11145"
     CDS             complement(4824..>5532)
                     /locus_tag="VIT19_11145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839582.1"
                     /translation="VKDEDEHSALKESMTLRYAAIDAEGKLSDEAQLDDRVCECCQTS
                     AALSQNGVVVAYRDRSTTEVRDISVIRSATNASWSSAQTVYPDDWKISACPVNGPAIV
                     AEGSRAAIAWFTEAGGQPHVNIAFSNDSGATFGNKIQVDDGNTVGRLDALLLPDGSAL
                     VCWLAGTVESGAIKVRRIQSNGAMGPVATIAKTDISRSSGFPRMARLQDEVVFAWTEF
                     GKPSHVRIATASVSAYK"
BASE COUNT         1277 a         1552 c         1436 g         1267 t
ORIGIN      
        1 ggcacgatcg gcggcctcat cggtcgaagc gcctatcacc tgcacaccca aagcggcgta
       61 ttcgttttga atagcggcga ggtcgggcat ctccttgcgg cagggaatgc agtaagtggc
      121 ccagaaattc agcacgacga ttcgaccttt catcgagccg aggttctgtt cggcccctga
      181 caggtctttt agtttgagat ccacttcggt gcctaacacc ttcgccgatt cacgttcagc
      241 caggctcggc gccatcaccg tgagctgatc gacttgaaat atcttcgtat ctttcttcgt
      301 ttggactgag ccggtgacgg cgacgcgttt gccgacaaag tcgagccagt tcttgcccgg
      361 caaacgaaac ttcccttgcg caagttggta aagcgtaaac cgatcgccct cgcgcacagc
      421 cagcagagta ggatctccgc cttcgacgca cgatttggct ttcaacagat tctcagcggt
      481 gccgaactcg actttggtcc gatcggcttc ggcccagcat tcttcgcaac agacaacctg
      541 gccttcgagt attatcgcgg gcctttgcgc tgtaatcgtc agcgcagtca tgaaacaaat
      601 gattaaactt atgaacaaac gcattatgaa attcctcgta agatagacac acttcggtct
      661 taaaacacag gcgcattaag actatgcttg gaaactagat ccgaaagacg cagaggcgtt
      721 caggaggagg atgttttgtc ggaaccggaa tgatcgaaac aaccgcgcca acagatcgaa
      781 gctcgttgat ggaagtagct ccgtgtagtt gcgctgagtt ggcttttggt tccaggtcgt
      841 tacgttcttt cgtcgccagc gcactgggtg tgagctcaaa cgcgcaatct tcactgcacg
      901 cggcttccat tgtggcaacg cttcggtcaa gcgattcttc tggaacttcg gaacatgtcc
      961 acacgcaccc cagaaaactt ccgaagatag caaccggaag gactaaagct agagttctta
     1021 ggagtgcggc ccggcgaagc atcattcgga aaggattata catgatgcgt ccgtaccaca
     1081 aagagcccga acctaatctg gaaccagaca aaacccgttg aaagtattga agaaagcgat
     1141 gcctctcagc acattggcgc gtcgcacgcc gccttctcac acgcgctgtc gcaaagcgtt
     1201 ggatttaact ggccttagtc ttttggtcta cttctgattt cgcgggtcgt ctgctggatt
     1261 cacgtaattg atcttccatg gccccatgcc gtgcacctgc accacagttt ctcctttcgc
     1321 ccaggcgaag tgcttcattc ccggcgccat gaaggcaaaa gaaccagcag aaagagcgcg
     1381 tccgccagac gtatcaaact tctcgcccat gccgagattg aacgtgccgg agatcaccgt
     1441 gacgtgctcg acggccgggt gccaatgcgg ctgaatctta aaaccgtccg gcaggtgcaa
     1501 acgcattgtg aacggtccgt cctgagccgg attaccttcc agcaaagcga cctttgctcc
     1561 ctttgggaga gatggcggtc cgtccgtcca cttcagatcc gctgtttggt agaagccgtg
     1621 atctgaatgg cccatgtttt ggccgatggc gaagccaacg accgcgaatg cgactgcaat
     1681 tactaatcca aaacgcttca tttctctttc tcctcttccg taagctgcta tctcttcggc
     1741 gacaagagtt catacgcgta aagcgttccc tcctggacgc caacaaacat tcgctgttca
     1801 gaactcccaa tgctcgaaat gcagcccttc agattcagct gccactgtgg cgcgccgtcg
     1861 gaagcccgaa atgctgctac ctcaccacga cagttaccgg ctaccaccag ctgcccccac
     1921 gcgtgagggc gttcggagcg ccaattcgct gaagactgcc gccatcgtat tttctttaga
     1981 tccggatcga ttgtaaccac gtatcccgag cgttctgagc gattgtccaa aaacaatagc
     2041 agtgcgtcgg cggtcaaagt gatccttcca aaaggcaccg cctctatcgg caactcggcg
     2101 acggtggttc ctgtttcggc gtttaggcga taaatccgat tgttaccggc gccgacaaaa
     2161 agcattttgt ccttgagagc caatccagtc gagggaaccg cgggcagctt tcgtttccag
     2221 accacgcgac cggattgggc ctcaagcgag taaacaattc catcgagtcc ggcgacgtaa
     2281 agatgccgat catcagcgac cggtgctttg atcatgtcgc agctttcatt tgctgcgccg
     2341 gtggaaaatt tccagagcaa actcccgtcc cggaggttta gcgcatacca attatcctgg
     2401 aaactgccga agtaaacgct ctggccgaca cgaagaatgt cggtcgggac gctggtggtt
     2461 tgatacttcc agcgcacttt gcccgtgctt ctttcaaagg catagaggtg cccaatgcca
     2521 tcgggcacgc aattatgatc agtgccaatc agaatcaaat catcggtaat taacgggttc
     2581 ccgtgaaagc tcttttgctt tccatctttc ccaatatcgt aactccaccg caccgcaccg
     2641 gtagctttgt tgaacgcata gaaaatgccg gcacatgaac cgacgaagac cgtatcctcc
     2701 gcgaccgcgg ggaccgagaa gattcaacca ccagtgtcgt attgccatgc cagcagtgga
     2761 gacttaaggc tggcttgttc agcttgcggc tttcgttgag cacaactcac gttagagagc
     2821 gccaacaata aagcgattga agatacaaag ttcttcggct tcatgatgcc tgggaccatt
     2881 ccctacttag ctccggcgct taccaacatt tcagccggaa acttcatttg attatcggga
     2941 aagaactcgc ccagcgactc ctcaactgcc tcagcaattc gcttggtttg tgccttcggg
     3001 agtgcttcga gtttctcgcg caacgttcct gaggtttggg agcgcatctc ccaaaattcc
     3061 cttggggtga tcggagcttc aatgtaaaac cgaagcgctt tttcggtaac gttgcgcgcc
     3121 ccggcctgcg tgagaacctg cgcgagcgcg cctggttcgg caaaccggaa agctcccggc
     3181 gcattcggat cagcaggcgg tgtctcgatg taccgagaga ctatgttcgt gatcacatac
     3241 gagaacggat tcagctcgct cttggcccaa acggcgaagg aaattttccc gcctggtttt
     3301 gtgacgcgaa gcatttccgt cacgcccgcc aatgaatccg ggaagaacat aacaccgagg
     3361 cgacagacag cggcgtcgaa ggtgttgtcg ccaaatggaa gtgagtccgc tgaagtctgc
     3421 cgaaactcga tattcataag gccacggcgc ctagcctctc gctcggccgc tgccaccatc
     3481 tcggctacga catctgtgca catgaccgat ccggaaggcc ggacaacttc agctatggct
     3541 agcgaaggct ccccgggccc gcccgcgaca tcgagaacgt gagcgcccgc gcggattccg
     3601 gcctcttcga taagtgcctg cgtcagaggc gcgaacatcg ttcgaatagt ttgcgcgtgc
     3661 ttctcccaat acgtcgcgga ctcgcaccac tcccgcaaga cgctgtcgtt cacgtcgacc
     3721 ggatcactct ttgcgcttga aatggccttc actgtaaaac tcaaaatcct taggttcgtt
     3781 agggggggaa gcctaatctt gaaatgaaca ttaaagaaat gaattgtttc gatggttacg
     3841 atagtcgatt acaatgctct aattgtggat gtgcgcggac tcgaagtctt tcttagcgtt
     3901 gcgaaacacc tgaactatac ccgggccggc gaggaggtaa accttagtca gcccagtgtc
     3961 tcggtgcgga ttcgtcaact tgaggatgag cttggcacga agctgttcga gcaactggga
     4021 aagaaggtgt cgttgacgga ggcgggtttg gtgctcatac ctcacgcgcg tcgcgtcatc
     4081 accgctgttg agaatgcgca agctgcaatt gacgagttgc tggggctgga acgcggaacg
     4141 ctgcgaatcg gcgccagcac cacaccgggc atgtatcttg ttccgcaagt catcgcgcgc
     4201 ttcaacgacc gatacccaaa aatcgaaata catctgggaa tcaaggacac ccaacaaatt
     4261 gaagaggccg ttatcagaaa tgagttcgac tttggttttg taggtggtca cctggccggt
     4321 gatgaggtcg acgtattccc ctgggtgaca gaccgactcg tgctgatcgt tgcgcccaat
     4381 cacccatttg cgaaaaagag atcaatcaga tccgatgatc ttcgaaacga aaagttcgtg
     4441 cttcgtgaac gtggttccgc cacccgtgct gcgattagca gccgcctcga gatctcaggg
     4501 ctggaaatca atccggttat ggaaatggag aatccagaat ctgttaagaa agcggttcag
     4561 agcggattgg gcatggcgtt catctccaga tttgccgtcg aagcagagtt gaaaaccagg
     4621 agtctcgtcg cgattcgtgt tcgtgggttc agaattgatc gcgaactaaa gatcgtctat
     4681 cgaagagata agcatctcgg ccgggcggca aaaaccttta ttgaaatggc gcgtcggttc
     4741 gattcgtgaa ctgcagattg ctgcatatcg aaaccagacc aaaaaaccgc atggcacaga
     4801 catatcgttc cgttcggcca tgttcacttg taggcgctaa cactggccgt ggcgatccgt
     4861 acatgtgaag gcttcccaaa ttctgtccac gcgaaaacca cttcgtcttg tagccgcgcc
     4921 atccgcggga acccgcttga gcgcgagatg tcagtcttcg cgatcgtggc gaccggtccc
     4981 atggcgccat ttgattgaat acgccggacc ttaatcgcgc cactttcaac cgtccccgcc
     5041 agccagcaaa caagcgctga accgtccggc aggagcaaag catcaaggcg gcccactgtg
     5101 tttccatcat ctacctgaat cttattgcca aaggtcgcgc cgctgtcgtt tgagaacgca
     5161 atattgacgt gcggctgtcc accggcttcc gtaaaccacg ctatagcggc ccgactgcct
     5221 tcagcaacaa tagccggccc gtttaccgga caagcgctaa ttttccagtc atccggataa
     5281 accgtttgcg ctgatgacca actggcgtta gttgcgcttc ggattactga gatgtccctc
     5341 acttcggtcg ttgagcgatc acggtacgcc acaacgacac cgttttggct gagggccgcc
     5401 gaggtttgac agcattcgca cacgcgatca tccagttggg cttcatctga gagtttgccc
     5461 tcagcgtcga tcgcggcata tctcagtgtc atgctttctt tcaacgcgct gtgctcgtcc
     5521 tcgtctttga cg
//
LOCUS       DATDBY010000594         3019 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1062264, whole genome shotgun sequence.
ACCESSION   DATDBY010000594 DATDBY010000000
VERSION     DATDBY010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3019
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1062264"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2427)
                     /locus_tag="VIT19_11150"
     CDS             complement(<1..2427)
                     /locus_tag="VIT19_11150"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5839583.1"
                     /translation="MRKVLMFVFAMCLSLFAAGVAQSQTTGSLEGTVTDPQGNAVPGI
                     TVNVTSPNLISAQSAVSDDSGRFRVLNLPPGRYTVKVDANTGSKGFAEFSKGDVEVNL
                     SRTTSVDVQLQLGGVSGTVTVTDTSGATVDVTNNTTGTNVSTEQFSNFPTQRTVQSLY
                     SIAPTVSRSGLRDASGRDRDPSVGGASGPENNYILDGVTTTDPAFGGSGANLPFEFVQ
                     EVEIKTGAYGAEYGKSTGGIFNVITKSGGNEFRGDAFGFFTTKGLVRETNQFPFTGSA
                     PDGFSEIDAGIAIGGPIKKDKLWFFGAFNPQQRKNFFLTQTLHAPVENKITTPFYSGK
                     LTWAVNQNNTFTFSTFGDFTKQEGFLFGNSGFGADPTSFRGEIQTGGHNYAFRLNSNL
                     TPTWIGEFSAGLHYQRANTIPEQGIGAKLIADNFAVLRGGAVLNLTQTATNFVANSTD
                     ANGVVRVTNFGPIAFVDGRGGTLERNYIRQGFGLYSDQDRNRMEFAARLQNIYGRHTI
                     KYGFEWTRNDYKIATLSTGPAQAFANTNNFPFVPDSGGADTLSVNGSRVTNLWLVCTT
                     RGTLIVCPSAAATARAAAIPVGNLPAGITGVGATSALTQAEFFNNPFLIFNAARVRDF
                     ELVADTYTNTESFYIQDDFKISRNVQFNFGLRWDFQQAYGNDGTYLKLNNFKDNLQPR
                     VGLIWDFTGQGKGKLFVNYARFLETPIPLDINVRAGSDTSQIDKNFNVSLPGAPNGAI
                     ATPLSGFAALNLGHARTPVDFDLKPQTVNEVSAGAEYEIARDLALGFRGIYRAQGTVI
                     EDGSFDDGNTY"
     gene            2837..>3019
                     /locus_tag="VIT19_11155"
     CDS             2837..>3019
                     /locus_tag="VIT19_11155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839584.1"
                     /translation="MSQRIYRDPVHNIIPLRADTPEGQLMIRLIDAPEFQRLRRIKQL
                     GLGLYTYQGAEHSRFTH"
BASE COUNT          676 a          814 c          838 g          691 t
ORIGIN      
        1 gtaggtgtta ccgtcgtcga atgaaccgtc ttcgatcacc gtgccctggg cgcggtagat
       61 gcctcggaag ccgagtgcga gatctcttgc gatctcatat tcagcgccgg cggatacttc
      121 gttgacggtt tgcggtttca ggtcgaaatc aaccggggta cgtgcgtgac ccagattgag
      181 cgccgcgaaa cctgagagcg gagtggcgat agcgccattc ggcgcacccg gaagcgaaac
      241 gttaaagttc ttgtcgatct gtgacgtgtc gctgcccgcg cgaacgttga tatccaacgg
      301 gataggtgtt tcgaggaaac gggcatagtt tacgaacagt ttacccttgc cctgtccagt
      361 gaaatcccaa atcagaccaa cgcgtggctg aaggttgtcc ttgaagttgt tgagcttcaa
      421 gtaggtaccg tcattaccgt acgcctgctg gaagtcccag cgcaaaccga agttgaactg
      481 cacattcctg gaaatcttga agtcatcctg aatgtagaag ctctcggtgt tggtgtaagt
      541 gtcagcaacc agctcgaaat cacgaacgcg cgcggcgttg aaaatcaaga acgggttgtt
      601 gaagaattcg gcctgggtca acgcggacgt cgccccgaca ccggtgattc ccgcaggcaa
      661 attacccacc ggaatcgcgg cagcacgagc cgttgcggca gcgctcggac atacgatcag
      721 agtgccgcgc gtggtgcaga ccaaccagag gttggtaacg cgcgagccgt tgacggatag
      781 agtatcggca ccgccgctat ccggtacaaa cggaaaattg ttcgtattag cgaacgcctg
      841 cgccggaccg gttgagaggg tcgcgatttt atagtcattg cgagtccact caaagccata
      901 cttgatcgtg tgacggccgt aaatgttctg caatctcgcc gcgaactcca tacgattgcg
      961 gtcctgatca ctgtaaagac caaaaccctg gcgaatatag ttgcgctcca acgttccgcc
     1021 gcgaccatca acaaaagcaa tcgggccgaa gttggtcact ctgacaacgc cgttcgcatc
     1081 ggttgagttg gcgacgaagt tggttgcggt ctgggtaaga ttcagcaccg cgccgccgcg
     1141 aagaaccgca aagttgtccg caatcagctt ggcgccaatg ccctgctcgg gaattgtgtt
     1201 ggcgcgctga tagtgcaagc ccgctgagaa ctcaccaatc catgtcggcg taaggtttga
     1261 gttcagccga aaagcgtagt tgtgaccacc ggtttggatt tcgccacgga agctggtcgg
     1321 gtcagcgccg aagcctgagt taccgaacag aaacccttcc tgcttggtga aatcaccgaa
     1381 agtcgagaac gtgaacgtgt tgttctggtt aaccgcccac gtcagctttc ctgaatagaa
     1441 cggtgtggtg atcttgttct cgaccggtgc atgaagtgtc tgagtcaaga agaagttctt
     1501 gcgctgctgg ggattaaacg cgccaaagaa ccagagcttg tctttcttga ttgggccgcc
     1561 aatggcaata ccggcgtcaa tttccgagaa gccgtccggc gcggagcccg taaacggaaa
     1621 ctggttcgtt tcgcgaacca ggcctttggt cgtaaagaag ccaaacgcgt cgccgcggaa
     1681 ctcgttgcca ccgctcttcg tgatgacgtt gaaaattccg cccgtggact tgccgtactc
     1741 agcgccgtag gcgccggttt tgatttcgac ttcctgaaca aactcgaacg gcaggttggc
     1801 tcccgatcca ccgaacgcgg ggtcggtcgt ggttacgccg tcgagaatgt agttgttttc
     1861 tggtccggat gctccaccca ccgacggatc tcgatcgcga ccggaggcgt cacgcagacc
     1921 cgagcgagac acggtcggcg caatcgaata aagcgattgt accgtgcgct gcgtggggaa
     1981 attcgagaac tgctcggtgc tcacattggt tccggtcgta ttgtttgtta cgtcgaccgt
     2041 tgcgcccgag gtgtcggtta cggtaaccgt accgcttacg ccgccgagct gtagttgaac
     2101 gtcaactgag gttgtcctac tcagattgac ctccacatcg cccttactaa attcggcgaa
     2161 gcctttgctt ccagtgtttg cgtcaacctt caccgtgtat cttcccggtg gcaggttcag
     2221 gacgcgaaag cgaccggaat catctgacac ggccgactgc gcggaaatca gattcgggct
     2281 cgtcacgttg accgtgatgc ccggcactgc attcccctgc gggtcggtca ctgtgccttc
     2341 aagcgatcct gtcgtttgtg actgtgccac gccagctgcg aacagcgaca ggcacatcgc
     2401 aaaaacgaac attaaaactt ttctcatcgt ttgtttcctt tcttgagggg ctccattaag
     2461 gagctttcta gttaactgaa ttcaaatgca ctggccaacc tctatcgaat gggtcagcct
     2521 aataattcct gttggaatag cggtgtcgcg gcgccttaag gtttgaactg aaataatctg
     2581 catccggact ttccgcaaaa agagtagatt ccgcagcctt ttaagcaatg acgatgccat
     2641 agcctaacgc ccggaacggc ctgtaaaaat cgttgatttt cggtaggttt agggccttgt
     2701 aaatccgaaa tttcggtttt agtccgaaat tccggaaata tgccgagaac gtcgtttccg
     2761 cggatgggcc ggcggggaaa tccagcaaga catcgtgtgg tagactgccg cctccctgaa
     2821 tcctttggcc gaacctttgt cccagagaat ctatcgcgat ccggttcaca acatcattcc
     2881 tctgcgtgct gacacgcctg agggtcaact gatgatccgt ttgatcgacg cacctgagtt
     2941 tcaaaggctg cgacgaatca aacaactcgg tctcggactg tacacatacc agggggccga
     3001 acactcgcgg ttcactcac
//
LOCUS       DATDBY010000595         6993 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1061288, whole genome shotgun sequence.
ACCESSION   DATDBY010000595 DATDBY010000000
VERSION     DATDBY010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6993
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1061288"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..5593)
                     /locus_tag="VIT19_11160"
     CDS             complement(26..5593)
                     /locus_tag="VIT19_11160"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase domain-containing protein"
                     /protein_id="HEY5839585.1"
                     /translation="MSHTKKSAGHNGCSARPSVLNRSQFLRRFLYLILICLLAVFVCR
                     AQPASVPDRAAEWNKYQTPASAFVRVKDEPNGVVFRAPADWTSVAAAPAADGQPVFRF
                     NGPHSSMLQVSIEKIPDGLPLTSYVAAILQQLRNVPGATAPLAVRRTEMSGLEAREIM
                     FEVPDENGELSRRIIWCTATGPVAVAVLLIGPKQHRAEIEPYLRTVIRSVAIPGKEKL
                     EVFELLRVNAIKETKPAPIDQLQAMVGTIDGLNAAEREAAVKNLTQLFIASPDVGIDL
                     LLDRRPIVRAAGIDALARSKNRLLDPFLLKALHDSESIVAERAGRALAATPNALALLR
                     DETVSWMNTAILARVWPFVEKQTKLQILNEVFGLQTRPGPRPTKSRATPRLAGNQAPD
                     SSTQLGLLTLLIDVPVQDFRLPLAAVLTARSDVLTAVALHVALLRDEKLDANELLKLL
                     SAGSTEVRRLAAVNLGDSATMAHVPQIEAAQKKIATPDSGTVLADSNVAAKTSAVASE
                     LQVTIKKIRLREQLTALGAEQRTAAIKVALADPQLANWAWFRYANQATAANADPDGPK
                     AAQLSLREENTFPDKLTHYVSVPKPGDLLNKLGESLNNIKMDSARSQANLVLVMSGMH
                     RLLATEFGAPVDGTIAEYAGVNTTAPISSGSWNLAGVPSSIPSAQRKAVLVRVGDRNR
                     FERTLALSQNALGSFALLPEGLAIGARFLGALPAVLPMSADALLQDKPRKEKNIPILQ
                     YTLSGQMEVAGYPVKYLAQRRVLENGDFTHDGIYAIYAGNVALLAPDLESLRDVLRRV
                     NTGGPTIETNPQYKAALAGGGDAIYFSNLTELVAEPGATSESQTREHGALKISNSSWE
                     SSYYLTSDDKNDAKFILGLRPNQLSGPRELLPRSTLFYYFMKVSPPDALRAWNTMTDS
                     KRDPAGMWSLNFEKEVLSEIEGECGAAVLGWPDLMAEEGSAPWIIFFKLKSDRLQQAL
                     NEGRLFKEATANKGVAKIKIGTTELNATITNGFLVFADSPGTLEQLKQPEKLAASPDF
                     SKAVKRTPTDVVAFGGYNLDVTMPSTATGSDSVQTQQVNMILLLARAFHSPNLYATVN
                     GGNLEAHSSVSLDHEGRYSVAELQKLATSEPAYAAIQPGGIPISNQKRLSHLSLRIQV
                     KAAGGAERIAEDVVNTSQTIERRTGEELVLKVLPRSADSTQKIQLPIAASEFAPYLKP
                     TADIRADDKTIIDKAKEIAGSDRDAWSVARKLADWTHANITWKVVDDANAAQTLATRE
                     ADCYEFSKLYVAMARSLGLPARIVSGLAYSGSSFGGHAWVEVYIGRWTELDPTWGTNF
                     VDATHIKTSNGALVSYAALDLIKVDVLDARRGAAAYQADAQTLANKLSEELSDGLTEA
                     LESSLDVALITDDLMGPGSWATLTDSERDQISGPFRRVVTRFASNFRKNQPFGAGLRL
                     LKVNRDGNRAEALAMHSANFQESLLKFLMVRHEGAWMLREILEVDTGLRMIAENLEPT
                     IYELRGRRSGQQQRAMFQTDFARVMVLLEQNPQASLDLADRLLKQKPKDAPLRYLKSV
                     ALVALERDEEAAKIWLELTQEDPPFAQALRSLAEHYQASEGESDRKKAGEFYQRYVVF
                     EPDDPRARTGLANFHELAGDFARAESEYRAAIERDSSNTTVFLDLAEFYSTRRRFVEA
                     SAVVDEAVKRTGDKEDLFAELLSRYWGTQDAEIPEALAASQPQRMAQSARANIMLARI
                     RLSHERPREAVALLRKAATLNPKSSEPYEMLAEAYRGMRDWASALTAADRAIRLDPED
                     AYGHYERACALARLGRARAAMAALKRAVELDEDLTEALAEEEDLKPLANLPEFKKLLP
                     PPAPPDSPTVKNP"
     gene            complement(5673..>6993)
                     /gene="hutH"
                     /locus_tag="VIT19_11165"
     CDS             complement(5673..>6993)
                     /gene="hutH"
                     /locus_tag="VIT19_11165"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF006871.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004397 - histidine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HEY5839586.1"
                     /translation="DIRIDPSQIRELQLNLVRSHSCGLGNPLSIEEARAMLLLRANVL
                     ALGYSGCRAIVVETLIEMLNRGVTPVIPEKGSVGASGDLAPLAHLALTTIGEGEAFHE
                     GERMESSDALKRAGIEPLQLEAKEGLALLNGTQAMAAVGGLALHHAARLTRLADVAGA
                     MSLEALKGTPVAFDERIHAARPHRGQTEVATHLRELLRDSEIRESHVENDPRVQDAYS
                     LRCMPQVHGAVRDALAHVRDIIETETGSATDNPLVFTDTGEVLSGGNFHGAPVAMALD
                     YAAIAVTDLMSITERRIDRLVNPDSNEDLPPFLTRQPGVGSGFMMLQIVAASLLSEAK
                     VLAHPASIDNVPTDGGKEDHVSMGMTGATKLRAIVELAEKMLALELITAAEGLEHRKP
                     LKPGRGARAAYEIVRKYVPRLTADRSMSVDIETIAQAVRDGLIDESA"
BASE COUNT         1362 a         2086 c         2014 g         1531 t
ORIGIN      
        1 cgcggcgcgc gaatgtttct gctggtcatg gattcttcac agttggactg tcgggcggcg
       61 ccggcggcgg gagcagcttc ttaaattcgg gcaggttcgc cagcggcttc agatcttctt
      121 cttctgctaa tgcttccgtc aaatcttcat caagctcaac ggcgcgtttc agcgccgcca
      181 ttgctgcgcg cgcgcgaccc aatcgcgcca acgcgcacgc ccgttcgtaa tggccataag
      241 cgtcttcggg atcgagccga atcgccctgt cagccgccgt caatgccgaa gcccagtcgc
      301 gcatgccgcg gtacgcttcg gccagcattt cgtaaggctc ggacgatttc gggttaaggg
      361 tcgcagcttt tcgcaacaga gctactgctt cacgcgggcg ctcgtgactg agtctgattc
      421 gcgccagcat gatattggcc cgcgcgcttt gagccatgcg ttgcggctga ctggctgcca
      481 atgcttcagg tatttcagca tcctgggttc cccagtatcg cgaaaggagt tcggcgaaca
      541 aatcctcctt gtcgccggta cgtttgacgg cttcatcgac aacggcgctt gcttcaacga
      601 agcggcggcg cgttgaatag aactcggcca ggtccagaaa gactgtcgtg tttgagctgt
      661 ccctttcaat ggccgcgcgg tactcacttt cggcacgtgc gaagtcaccc gcgagctcgt
      721 ggaaattcgc cagacccgtg cgcgccctcg gatcgtcggg ttcgaacacc acatagcgct
      781 gatagaactc gccggccttc tttcgatcgc tttcgccttc cgaggcctgg tagtgctcag
      841 ccagactccg caatgcctgc gcgaacggcg gatcctcctg ggttagctca agccagatct
      901 tcgcagcctc ttcgtctctc tcgagagcga cgagcgccac cgacttcaag taacgcaaag
      961 gcgcgtcctt tggtttctgt ttcagcaggc ggtcggcgag gtccaaactg gcctgtgggt
     1021 tctgttcaag taggaccatg acccgcgcga aatcggtttg gaacatcgcg cgctgctgct
     1081 gaccactgcg ccggccacgc aattcgtaaa tcgtcggttc cagattctca gcgatcatcc
     1141 gcagcccagt gtcgacctcc agaatctcgc gtagcatcca ggcgccctcg tgtcggacca
     1201 tcaggaattt aagtagagac tcctggaaat ttgcggaatg catcgccaac gcttcggctc
     1261 ggttgccgtc gcgattgact ttcagcaaac gcagtccggc gccgaacggc tgattctttc
     1321 gaaagttcga cgcgaatctg gtgaccactc tgcgaaaagg acctgagatt tgatcgcgct
     1381 ctgaatccgt caacgttgcc caggagccgg ggcccatcag atcgtcggtt atcagcgcga
     1441 catccagcga gctctcgaga gcttcagtta gaccatcaga caattcttca gaaagtttgt
     1501 tcgccagggt ctgcgcgtct gcttgataag ccgctgcgcc gcgccgtgcg tccaacacgt
     1561 caaccttgat tagatccagc gccgcgtaac tgaccagcgc gccatttgac gtcttgatgt
     1621 gcgtcgcatc gacaaagttc gttccccagg tcgggtcgag ctcggtccag cggccgatgt
     1681 agacctcaac ccacgcgtgc ccaccgaatg aactgccgct gtacgccagt cccgaaacga
     1741 tgcgcgcggg caatcccaag ctgcgcgcca tggccacata aagcttgctg aactcgtaac
     1801 aatcggcttc gcgggtggcc aaagtctgcg ccgcgttggc atcatcgacg accttccagg
     1861 tgatgtttgc gtgcgtccag tccgccagct tacgggcgac actccacgcg tcgcgatcgc
     1921 taccggcgat ctctttagct ttgtcgatga ttgtcttatc gtcagcgcga atgtcggccg
     1981 tcggtttcag gtagggcgcg aactcgctag cggctatcgg caactggatt ttctgagtgg
     2041 aatcggcgga gcggggaagg actttcaaga ccaactcctc gccggtccga cgctcgatcg
     2101 tttgggaagt attaacgacg tcttcggcaa tacgttccgc gccgcctgcc gctttcacct
     2161 gaatccgtaa actaagatga ctaagtcttt tttgattcga gataggaata ccgcccggct
     2221 ggatcgccgc gtaagcgggt tcggatgtcg cgagcttctg taactccgcg actgaatagc
     2281 gaccttcgtg gtccagcgag accgacgagt gcgcctcgag gtttcctcca ttcacggtcg
     2341 cgtacaaatt cggactgtga aacgcgcggg cgagcaacag aatcatgttc acctgctgcg
     2401 tctgaaccga atctgacccg gtggctgtcg agggcatcgt gacgtccagg ttgtagcctc
     2461 cgaacgcaac gacgtccgtg ggagtgcgct taaccgcttt actgaaatca ggagaagcgg
     2521 cgagtttctc gggttgcttg agttgctcaa gagttccagg cgaatccgcg aaaaccagaa
     2581 aaccgttagt gatagtagcg ttcagctcgg tcgttccgat tttgattttc gccacgccct
     2641 tgtttgcagt tgcctccttg aacaatcgtc cttcgttcaa cgcttgctgc aaccgatcgc
     2701 tcttcaactt gaaaaaaatg atccagggag cagacccttc ctccgccatt agatcgggcc
     2761 agcccagcac cgccgcgccg cactctcctt cgatctcaga cagcacttcc ttctcaaagt
     2821 ttagcgacca catgccagcc gggtctcgct tactgtcagt catggtgttc cacgcccgca
     2881 gcgcgtcggg tgggctgacc ttcatgaagt aataaaacaa tgtcgaacga ggcaacagtt
     2941 cgcgcgggcc tgaaagctgg ttcggacgta aacccaggat aaattttgcg tcgttcttat
     3001 cgtccgacgt caggtaatac gaactctccc acgacgagtt ggaaatcttg agggcgccat
     3061 gctcgcgagt ttgagattcg gacgtggcac ctggttcggc gactaattcc gtgaggttgc
     3121 tgaagtagat cgcatcgccg ccaccggcca atgctgcctt gtactgagga ttggtttcaa
     3181 ttgtcgggcc gcccgtattc acgcgcctca gcacgtcgcg cagcgactct aaatccggcg
     3241 ccaacagcgc cacgttgccg gcatagattg cgtaaatgcc atcgtgcgtg aaatccccat
     3301 tctcaagcac gcgccgctgc gccaggtact ttacgggata gcccgccacc tccatctgtc
     3361 ccgacaatgt gtactggaga atcggaatat ttttttcttt gcgcggcttg tcctggagca
     3421 gcgcgtcggc agacatcggc agaaccgccg gtagcgctcc caggaaccgc gcaccaatcg
     3481 ccagaccttc cggcagtaaa gcaaagcttc ccaacgcgtt ttgggataac gccagggtgc
     3541 gctcaaaacg attccggtct cccacccgta ccaggaccgc tttacgctgg gcgctgggaa
     3601 tactcgatgg gacgccggcg agattccaac tccccgaaga gataggcgcg gtggtgttca
     3661 caccggcgta ttccgcgatc gtgccgtcga ccggcgcgcc gaactccgtc gccaacagcc
     3721 ggtgcatgcc gctcatcacc aacaccaggt ttgcctgcga gcgcgcggaa tccattttga
     3781 tgttgtttag cgattcgccc agtttgttaa gcaagtcccc cggctttggc acagagacgt
     3841 agtgcgtcaa cttgtcagga aacgtattct cctcgcgcag cgaaagttga gccgccttcg
     3901 ggccgtccgg gtccgcattc gcagcagttg cctgattcgc atatctgaac cacgcccaat
     3961 tcgcgagctg tggatcggcg agcgcgactt tgattgccgc ggttcgctgc tcagcaccaa
     4021 gtgcggttaa ttgctcgcgt aggcgaatct tcttaatggt tacttgcaac tctgatgcga
     4081 cggcactggt ttttgcagct acgttactgt cggcgaggac ggtgccggaa tctggcgtgg
     4141 cgattttttt ctgtgcggct tcaatctgcg ggacatgggc cattgtcgct gaatccccga
     4201 gattcacggc cgccaatcga cgcacttcgg tgctgcccgc ggaaagaagc ttcaacagtt
     4261 cgttggcgtc aagcttttcg tctcgcaaga gcgcgacgtg cagcgccaca gccgtgagta
     4321 catcgctgcg cgcggtcagc acggctgcga gaggtagtcg aaagtcctgg accggtacgt
     4381 caatcagcaa agtcagcaag cctaattgcg tgctggaatc cggcgcttga ttacccgcaa
     4441 gccgaggtgt cgcgcgggat tttgtgggtc gcggacccgg gcgagtttgg aggccaaaca
     4501 cctcgttcag aatctgtaac ttcgtttgtt tttcgacgaa cggccagact ctcgcaagta
     4561 tcgcggtgtt catccagcta accgtttcgt cgcggagcag agcgagcgca ttcggtgtgg
     4621 cggcgagcgc ccgccccgcg cgctcggcta cgattgattc cgaatcgtgc agggctttca
     4681 gcaggaacgg atccaataat cggtttttgg atcgcgcgag cgcgtcgatg ccggcggctc
     4741 gtactatcgg acggcgatcc aacaacagat cgatcccgac gtcgggcgat gcaatgaaca
     4801 gttgagtcag atttttgacc gcggcttcgc gttcagccgc gttgagaccg tcaatcgtcc
     4861 cgaccatggc ttgaagctga tcaatggggg caggcttggt ctccttgatc gcgttaacac
     4921 gcagcagctc gaatacttcc agcttctctt tgcccggaat cgcgaccgac cggatcaccg
     4981 tgcgcaggta aggttcgatc tcggcacgat gttgttttgg tccaattagc aggaccgcaa
     5041 ccgcaacggg accagtggcc gtgcaccaga tgatgcgtcg tgacagttca ccgttttcat
     5101 ccggcacctc aaacatgatt tcgcgcgctt caagccccga catttccgtg cgacgcaccg
     5161 ccagcggtgc ggtagcgccc ggaacattgc gcaattgctg gaggatggct gctacgtaac
     5221 tcgtcagggg taagccgtcg ggaatcttct cgatggaaac ttgcagcatc gaggagtgtg
     5281 gtccattaaa gcgaaagacg ggctgcccat cggcggccgg agcagccgcg acgcttgtcc
     5341 agtcggcggg tgcgcggaat acgacgccgt tcggctcatc cttgactcgc acgaatgctg
     5401 acgccggcgt ctgatacttg ttccattcgg cggcgcggtc gggaaccgat gcaggttgag
     5461 cgcggcagac gaacaccgcg agcaaacaga tcagaattag gtacaaaaac ctgcgcagga
     5521 actgcgagcg attgaggacg ctgggacgcg cggaacatcc gttgtgcccg gcggatttct
     5581 tggtgtggga catctgcaaa ggtttggggt gtcgctttgg acgggatcgg gcgagttacc
     5641 cgccgcagtt attgatcaac cggtgactgg cgtcaagcag attcatcaat caggccgtcg
     5701 cggactgcct gggcgattgt ttcaatgtcc acggacatgg accggtcggc ggtgagtcgc
     5761 ggcacatact tgcggacgat ttcataggct gcgcgtgcgc ctcggccagg cttcaaaggc
     5821 ttgcgatgtt ccaggccttc agccgcagta attagttcga gcgccaacat tttctctgcc
     5881 agctcaacga tcgcgcgcag cttggtcgca ccggtcatgc ccatcgaaac gtgatcttct
     5941 ttgccgccgt cagtcgggac gttgtcgatg ctggccgggt gggcgagcac tttcgcttca
     6001 ctcaaaagcg aagcggcaac gatctgcagc atcatgaaac ctgagccgac gccaggttgc
     6061 cgcgtcagaa atggcggcaa gtcttcgttt gaatcaggat tcactaaacg atcgatgcgc
     6121 cgttcggtga tgctcattaa atccgttacc gctatggccg cgtaatcaag tgccatcgcg
     6181 acgggcgcgc cgtgaaaatt tccgccggaa agaacttcgc ccgtgtcggt gaacaccagc
     6241 gggttgtccg tggcgctgcc ggtttccgtt tcgataatgt cgcgcacatg cgcgagcgca
     6301 tcgcgaaccg cgccatgtac ctgcggcatg caacgtaatg agtacgcatc ctgcacgcgc
     6361 gggtcgtttt ccacgtgcga ctcgcgaatc tcgctgtcgc gcagcagctc gcgcaggtgt
     6421 gtcgcaactt ctgtttgtcc gcggtgagga cgcgctgcat ggattcgttc atcgaaagcg
     6481 accggagttc ctttcaatgc ttccaaagac atcgcgccgg cgacatcggc aaggcgcgtc
     6541 aatcgagctg catgatgcag cgcgagtccg cccaccgccg ccatcgcttg cgtcccattc
     6601 agtaaagcga gtccttcctt cgcctcgagt tgcagcggtt cgattcccgc gcgtttcaaa
     6661 gcatcggagc tctccatgcg ctcaccttcg tggaacgctt cgccttcgcc gatagtggtc
     6721 aatgcgaggt gagccagcgg cgccagatcg ccgctcgcgc cgaccgatcc tttctcgggg
     6781 attaccggtg tgacgccgcg attcaacatc tcgatgagcg tctctaccac gatcgcgcga
     6841 cagccgctgt acccgagcgc caggacattc gcgcgcagca gcaacatcgc gcgcgcttct
     6901 tcaatcgaca ggggattgcc gagaccgcac gaatggctgc gcacgagatt cagttgcagc
     6961 tcgcgaatct gcgacgggtc gatgcgaatg tcg
//
LOCUS       DATDBY010000596         5207 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_673097, whole genome shotgun sequence.
ACCESSION   DATDBY010000596 DATDBY010000000
VERSION     DATDBY010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5207
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673097"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..800)
                     /locus_tag="VIT19_11170"
     CDS             complement(<1..800)
                     /locus_tag="VIT19_11170"
                     /inference="COORDINATES: protein motif:HMM:NF013761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HEY5839587.1"
                     /translation="MLTRSALLYLARQDKLKDFAARFAAFRKITARFIAGETSDQAVA
                     AIKELNTGGCSASFDHLNESVDSVAETEGEVREYLNVLAKIDESQINSNVSIKLTQFG
                     LDIDPELAYRNARTVVADAVRRGNFVRVDMEGSAVTQVTIDIFKRLRSEFGLNDVGIV
                     LQSYLRRTYDDAQDLLKIPARIRICKGAYNEPPEVAFPDKKDVDENYVRVMKLLLSSG
                     TYHGIATHDPHMINATIRHARDQGIGKEAFEFQMLYGIRRDLQEKLAR"
     gene            complement(1193..1789)
                     /locus_tag="VIT19_11175"
     CDS             complement(1193..1789)
                     /locus_tag="VIT19_11175"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEY5839588.1"
                     /translation="MTTPTREEAWELLCEYTKGDSLRKHGLAVETAMRACAGRYGDAE
                     ADKDEWGLVGLLHDFDYEMFPSADQHPFTGSNILCGRGYPDRIIKAILGHATYTGVPR
                     DTQMAKALFATDELCGFLVACALVRPTRSLDDLEVKSVKKKLKDKAFARSVNRDDIHQ
                     GVEELGVTLDEHIQFVINALKPVQKEIGLGLKEGSVSV"
     gene            complement(1968..3266)
                     /locus_tag="VIT19_11180"
     CDS             complement(1968..3266)
                     /locus_tag="VIT19_11180"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5839589.1"
                     /translation="MQQATRVLALLISLAFVGQSLIAQPQKKPPVAAPQKPAKVEQVE
                     EAPTEQDLETVKVDTNLVTVPVIASSRTGRYIADLVKEEFKISEDGVAQEIAFLATVS
                     SPFTLVLLLDTSGSTKEKLPTIQRAAMAFVEQLSSTDKVKVISFDDSVRDWNEFTSDK
                     AVIRKAISQTTSGEGTKVYDAVELALNNLRPVSGRRAIVVFTDGVDWHSDRGGSYEGT
                     LKNLDESGVIIYPIRFDTRAETEAIARRQAGEQGGFGLPTSDVIRQQGTTPSTFPSDD
                     PSSDPNRQGQRKSPLEMILSRPVRRPMPTQTPQGSPTDFPDAAGGRRPPIDPGPAPSK
                     RPSPDDSIKGMLDQAYFMADSYLKELADRSGGQVHRADTLAMLPQAFAAIAAELRTQY
                     SLGYYPTNREKDGKYRKIQVKTTRKDVAIRARPGYRAKAN"
     gene            3395..4171
                     /locus_tag="VIT19_11185"
     CDS             3395..4171
                     /locus_tag="VIT19_11185"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEY5839590.1"
                     /translation="MNERVLLVAPASKLTSQLESAGFQTTTWPPLQLAPPDNFAALDE
                     AIANLYGYDWIIFIDSEAVRFFVERVRQQSREVSDLDTLRVCAIGEATGAALEHARVH
                     VDVVATQTNPSAIVEQVATYAGGIEHLDRLNFLLPQAAIGRDYLKEHIESIGARADVV
                     VSYQTVANDDLTRLAGLHSMLLTGSFDAVVFAAPDEVFELARVFDTNNLDRLLRSTFV
                     LAIGEATKNAAEAAGISHPLQPDASAPHAITELLAKRFGV"
     gene            4225..>5207
                     /locus_tag="VIT19_11190"
     CDS             4225..>5207
                     /locus_tag="VIT19_11190"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY5839591.1"
                     /translation="MLIIDSDRNFSHALRDQLKTLGYEVLAEPNNASGIKVAETFSPS
                     VIITDTIPTDGEAFAALREIRLNHPHTPIIVAGEASSVETALRAIQDEGAYHYFNKPV
                     EVEKLMPVLERAVELAEARRENDLLRRELRDRGAFGELVGNSEAMQQVYRLIEQVASS
                     SASVLITGESGTGKELVARTIHNLSPRRDAPFLAINCSAIPDTLMESELFGHEKGAFT
                     GAVARRHGCFELANTGTLLLDEIGEMPTLLQAKLLRVIEERVLHRLGSRKDISVDVRI
                     LAATNRDPHTAVRDKTLREDLLYRLNVITILLPPLAQRLDDLPLLVQHLVTR"
BASE COUNT         1035 a         1530 c         1458 g         1184 t
ORIGIN      
        1 tcgcgcgcca gtttctcctg caaatcgcgg cgaatgccgt aaagcatctg aaactcgaaa
       61 gcttccttgc cgattccctg atcgcgcgcg tggcgaatgg tggcgttaat catgtgcggg
      121 tcgtgggtgg cgatgccatg ataggtgccg cttgagagca gaagtttcat cacccgcaca
      181 tagttttcat ccacgtcctt cttatccggg aatgcgactt cgggtggttc attgtaggcg
      241 cctttgcaga tgcgtatgcg tgccgggatc ttcaacaagt cctgcgcgtc gtcgtaagtt
      301 cggcgaagat acgattgcag aacgatcccg acgtcattca atccgaattc gctccgcagt
      361 cgcttgaaga tatcgatcgt gacttgagta accgctgatc cctccatatc gacgcgcaca
      421 aagttgccgc ggcggaccgc gtctgcaacg accgtgcgcg cgttgcgata agcgagttcc
      481 ggatcgatgt cgagtccgaa ttgggtcagc ttgatcgaga cgttcgagtt gatttgtgac
      541 tcgtcgattt tcgcgagcac gttgagatac tcgcgcactt cgccttcggt ttcagcgacg
      601 ctatcaacgg actcgttcag gtgatcgaac gaagcggaac atccgcccgt gttgagttcc
      661 ttgatcgctg ccacggcttg atcactcgtt tcgccggcaa taaaccgggc ggtgatcttt
      721 ctgaacgcag caaaccgtgc cgcgaaatct ttaagtttgt cctgacgggc gagatagagc
      781 agagcgcttc tggtgagcat tgttcggtga tttattcgct gtgatactct tgctgttaat
      841 ccttgtcctt agaactgact ctgacgaatc ggaatgcgtt ggaaactagt catcatcgtg
      901 tctttcgtgg ctgccatggc agactttctg atctggctag ccacagtcca cttagtattc
      961 ggagtgcaaa tccaagcatc ccctctggac gtggcgatct tagggatgct gttacctttg
     1021 gcattcgcgg cgttcggggc cttttttgtg tatcgtcaca cagcgcgcag gcgcaagctt
     1081 caggcgttga ttgcctcgct tctcacctta atcttggttc tcggtattta cgttgtaggt
     1141 gcgcgggcct ttccgcggat aatcataccc tcatggacag aaccgccttg ggtcaaacgc
     1201 taactgaacc ctctttgaga cccaatccga tttccttctg caccggcttc aacgcattaa
     1261 tcacaaactg aatatgttca tccagcgtga cgcccaactc ttcgacacct tgatggatgt
     1321 cgtcgcgatt gactgaacgc gcaaaggctt tgtcttttag tttcttcttc accgacttta
     1381 cttcgaggtc atcgaggctg cgcgtcggcc gcaccagcgc gcacgcgacc agaaagccgc
     1441 acagctcgtc ggtcgcgaac aaggccttcg ccatctgcgt gtcgcgcggg acgccggtgt
     1501 acgtcgcatg accgagtatc gctttgatta ttcgatcggg atagccacgg ccgcacagga
     1561 tgttcgagcc agtgaacgga tgctggtcgg ccgagggaaa catctcgtaa tcaaagtcgt
     1621 gaagcaaccc gaccagaccc cactcgtctt tgtctgcttc ggcgtcgccg tagcgtccag
     1681 cacacgcacg catcgccgtc tcgactgcga gcccatgctt gcgcaggcta tcgcccttcg
     1741 tgtactcgca gagcagttcc cacgcttctt cacgggtcgg tgttgtcatg aaatttgcct
     1801 ggccgagtga aaaactaacg caatttggag tgcggcggca agcgccgggg cccccggcgc
     1861 ggcagccgcg ctggggtggt cgcagcgcga cgccgctttg gatcggaaca cgcgttcttc
     1921 ataaaccaaa gcgctgtcgc cgcttcgctc tgccagcgca ctccaaatta atttgccttc
     1981 gcgcgatagc cgggccgcgc gcgaatcgcg acgtctttgc gcgtagtctt gacctggatc
     2041 ttgcggtact tcccgtcctt ttcacggttc gtcgggtaat acccgagcga atattgcgtg
     2101 cgcaactctg ccgcgatggc ggcgaacgcc tgcggcagca tcgcgagagt gtcggcgcga
     2161 tgcacctgtc cgcccgaacg atcggcgagt tctttcaagt agctgtccgc catgaagtac
     2221 gcctggtcga gcatcccttt aatcgagtcg tcgggcgagg ggcgcttgct cggcgccgga
     2281 ccgggatcga ttggcggtct ccggccacca gcagcgtcgg gaaaatcggt cggcgatcct
     2341 tgcggagtct gagtcggcat cggacgccgc accgggcggc tgagaatcat ctccaacggc
     2401 gatttgcgct ggccctgccg attcggatcg gaggaaggat catcagaggg aaaggtggat
     2461 ggggtggtgc cctgctggcg aattacatcg ctggtcggta atccgaaccc gccctgctcg
     2521 cccgcctgac gtcgcgcgat cgcttcagtc tctgcacggg tatcgaaacg aatcggatag
     2581 atgatcacac cgctctcgtc caggttcttt agcgtcccct cgtaactccc tcccctgtcg
     2641 ctgtgccagt cgacaccatc cgtgaacacg acgatggcgc gccgcccact aaccggtcgc
     2701 agattattca gcgccagttc aaccgcgtca tagactttcg ttccctcgcc cgacgtggtt
     2761 tgcgagatag ccttgcgaat gaccgctttg tccgacgtga actcattcca gtcgcgcact
     2821 gaatcgtcga acgagatcac ctttactttg tcggttgagc ttaactgctc gacaaacgcc
     2881 atcgccgccc gctgaatcgt cggcaacttt tctttggtgc tgccgctggt atcaagaagc
     2941 agtaccaggg tgaagggcga gctaaccgtc gcgagaaacg cgatctcttg ggcgacgccg
     3001 tcctcagaaa tcttgaattc ttctttgacc aggtcggcga tgtaccttcc tgtgcgcgaa
     3061 ctggcaatga ccggaaccgt caccaggttt gtgtcgactt ttaccgtctc cagatcctgt
     3121 tcggtgggag cctcttcgac ctgctcgacc ttagccggtt tttgcggagc agccactggc
     3181 ggcttcttct gaggctgagc gatcaaagac tgccccacaa aagcgagact gatcagcagg
     3241 gccaaaactc gagttgcctg ttgcattgga agaagcgccg gactgcggtg aatcgaacta
     3301 tttggagaga cgcggtattg taaacacgtt tcggcgcgaa tccaactatg atctatctca
     3361 tccgcgcgct gtttgacgat ctctcgtatg tccgatgaat gaacgtgttc tgctcgttgc
     3421 cccggcgtca aagctgactt cgcaactcga atcagcgggt tttcaaacca ccacgtggcc
     3481 gccgctgcag ttggcgccgc ctgacaattt cgcggctctc gatgaggcga tcgcgaacct
     3541 ttacggctac gactggatta tcttcatcga ctccgaggca gttcgcttct ttgtcgagcg
     3601 agtccggcag cagtcacggg aagttagcga cctcgatacg ctccgtgtat gcgcaattgg
     3661 cgaagcgacg ggcgccgcgc ttgaacacgc gcgagttcat gtcgatgtcg tggcgacgca
     3721 aactaatccg tcagcaatcg tcgaacaggt ggccacatac gctggcggca tcgaacacct
     3781 ggatcgcctg aacttcttgt tgccccaagc cgcgataggc cgcgattatc tgaaagaaca
     3841 tattgaaagc attggtgctc gcgcggacgt cgtcgtttcg taccagacgg tcgccaacga
     3901 tgacttgacg cgattagcgg gcctgcacag catgctgctc accggcagct ttgatgctgt
     3961 cgtgttcgcc gctcctgatg aggtgttcga actggcccgc gtgttcgaca ccaacaatct
     4021 ggaccgactt ttgaggagca cgttcgtgct cgccattggc gaagccacaa agaacgcggc
     4081 cgaagccgcc ggcatttcgc atccgctgca accggacgcg tctgcaccgc acgcaatcac
     4141 tgaattactg gcgaaacgct tcggggttta acctcgacag cccgacattt gcgctgtgct
     4201 aaactgaaac ggatgaaagg ccgcgtgctc atcatcgaca gcgatcgaaa cttttcgcat
     4261 gctttgcgcg atcagttgaa gacgcttggc tacgaagtac tcgccgaacc aaacaacgct
     4321 tccggcatca aagtcgccga aacattttct ccttcggtaa tcatcaccga cactatcccg
     4381 actgacggcg aggcgttcgc cgccttgcgc gaaatccgcc tcaaccaccc gcacactccg
     4441 ataattgttg cgggcgaagc tagttcggtt gaaacggcgc tgcgcgcgat tcaggacgag
     4501 ggcgcctacc actatttcaa caagccagtc gaagtcgaga aactgatgcc ggtgctcgag
     4561 cgcgcggtgg aactcgctga agcacggcgc gaaaatgatt tgctgcggcg ggaattgcgc
     4621 gaccgcggcg ccttcggtga actcgtcggc aattcagaag cgatgcagca ggtgtaccgc
     4681 ttgatcgagc aggttgcgtc ctcgtccgcg tccgtgctga tcaccggcga atccggcacg
     4741 ggcaaagagc tggtggcccg gacgattcac aatttgagtc cgcggcggga tgcgccgttt
     4801 ctcgcgatta actgctcggc catcccggac acgttgatgg agtcggaatt attcgggcac
     4861 gaaaaaggag ccttcaccgg agcagtcgcg cgccggcacg gttgtttcga gctggcaaac
     4921 accggcacac tcttgctcga tgaaatcggc gaaatgccga cgctgcttca ggcaaaactg
     4981 ttgcgggtta tcgaagaacg cgtcctgcat cgtctcggta gtcgaaagga catctcggtc
     5041 gatgttcgca ttctcgccgc cactaaccgg gacccacata cagcggtccg cgacaaaacg
     5101 ctccgcgaag accttctcta ccgtttgaac gtaatcacga ttcttctgcc gcctttggcc
     5161 cagcgactcg acgatctgcc gctcctggtg caacatctgg tgacgcg
//
LOCUS       DATDBY010000597         2348 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_36408, whole genome shotgun sequence.
ACCESSION   DATDBY010000597 DATDBY010000000
VERSION     DATDBY010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36408"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="VIT19_11195"
     CDS             complement(<1..469)
                     /locus_tag="VIT19_11195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839592.1"
                     /translation="MATDIQSELDRLHRSATMFVWFFFALDIVLVAIAYLAGQRIFRP
                     ANPQLAFGLWLVILVCGLGVFVLRRTRFSAMRLQDIAAVKGVSAMLRTLQGTTIQVAS
                     IGGAIGLLGFIITIITGDWTNMLRAAGVSIIVLLYCYPFKSAWQRTVRQLAPPE"
     gene            complement(734..2275)
                     /gene="bamD"
                     /locus_tag="VIT19_11200"
     CDS             complement(734..2275)
                     /gene="bamD"
                     /locus_tag="VIT19_11200"
                     /inference="COORDINATES: protein motif:HMM:TIGR03302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEY5839593.1"
                     /translation="MFLVFNRGRNSMKVFSSLLLIAALSVIPVLHPVAALALPNAQGQ
                     NDASNSQRLSIMRSKLEAMRRSLSSAIAAMNSGDKGDKKNADDPRERLRGLDKEVGSI
                     LSEVNDLVAKEEKAEKYDTSRLSGLETSITELNTRVESGLQSTASSRTGETANYRPKQ
                     KGGRRFFGLLPGKKNDKYEELTGTVAPGRDRVLFIEAAKEVRGGRHETGRLLFTTIIN
                     TYPDSRYLALAKLAIADSFYIEGTTSSLIQAGQAYEDWRTYFPTDQLADDALLKVAET
                     EMRQMGLSDRDISHARKAEQRLKALLQRYPQTDLRQHAEVRLRQVQDNLAMHNLQVAR
                     FYYDSRYSHKKGGLKGAQDRLKEITEKYPGFCLMDEVLFRYATTFLEEEEPDEAAKLY
                     QQIVRDYPNSEYVEKAKEQLNIIGAAIPDPDPIKKDLPPCEKPGFMANLMQQISGSAG
                     VTTSRDGILITRDGEGTDLIDKAIGNNGELPENVQPVIQRTTPTPNVSERPRTTQTPS
                     PSPKP"
BASE COUNT          491 a          674 c          671 g          512 t
ORIGIN      
        1 actcgggcgg agcaagttgc cgcaccgtgc gctgccacgc gcttttgaat ggatagcagt
       61 agagcaaaac gataatggaa acgccggcgg cgcgcagcat gttcgtccaa tcaccagtga
      121 tgatagtgat gatgaaaccc agcaaaccga tcgccccgcc gatcgacgcc acctgaatgg
      181 tggtgccttg cagcgtccgc agcattgctg agacaccttt caccgccgca atgtcctgca
      241 gacgcatggc tgaaaatcga gtgcgcctga gaacaaacac gccgaggccg caaaccagaa
      301 tcaccagcca caaaccaaag gcgagttgcg gatttgccgg gcgaaagatg cgctggccgg
      361 cgaggtaggc aatcgccacc aacacgatgt ccaaagcaaa aaagaaccag acaaacatgg
      421 tcgccgagcg atgcaggcga tcgagttcgc tttgaatgtc tgtcgccata ggagcggaat
      481 gctacgtgag actaccggcc taagacaagt gaatgcgatg agttatggtg cccacgcgtc
      541 tcgcgtgctg cacgtcagcg gcgagcgtac cggccgcaaa cgcgccgtta ggcgccgaat
      601 gtttatagaa ccggcgttca aaccgttcca atgcgcatcg agggaaaccg gagttctccg
      661 gtttccctcg atgtaaatga atttagatta cctaacgctg ctataaacat tcgaccgcta
      721 cgcggccaag ttgctacggc ttcgggctgg gtgacggagt ttgcgtcgtg cgcggacgtt
      781 cggaaacgtt cggtgtcggc gtggtccgtt gaatcaccgg ctgcacattc tcgggcagct
      841 cgccgttgtt gccgatggcc ttatcgatca agtcggtgcc ttcgccgtca cgcgtaatca
      901 gaatgccatc acggctggtc gtaacgccgg cgctaccgct gatttgctgc atcagattgg
      961 ccatgaagcc gggcttctcg cagggtggca gatccttctt gatgggatcc ggatcgggaa
     1021 tcgctgcgcc gatgatgttc aattgttcct tcgccttttc cacgtactcg ctattcgggt
     1081 aatcgcgtac gatctgctgg taaagcttcg cagcttcgtc cggctcttct tcttccagga
     1141 acgtggtcgc atagcggaac agcacctcgt ccatcagaca gaagcccgga tacttctccg
     1201 tgatctcctt caagcgatcc tgcgcgccct tgagaccgcc cttcttatgg ctgtaacgcg
     1261 agtcgtagta gaaccgcgcc acctgcaaat tgtgcatcgc gagattgtcc tgcacctgcc
     1321 gcagacgcac ttccgcgtgc tggcggaggt cggtttgcgg atacctttga agcagcgctt
     1381 tcagacgttg ctcagctttg cgtgcgtggc taatgtcacg atccgacaag cccatctggc
     1441 gcatctccgt ctcggcaacc ttcaatagcg cgtcatcggc gagctgatcg gtcgggaaat
     1501 aggtgcgcca gtcttcgtaa gcttgtccgg cctgaatcaa agaggacgtg gtgccctcga
     1561 tatagaaaga gtccgcaatg gcaagttttg ccagcgcgag ataacgcgag tccggatagg
     1621 tgttgataat cgtggtgaac aacaaccggc cggtttcatg gcgaccgccg cggacttcct
     1681 tggcggcttc gatgaacagc acgcgatccc gtccgggcgc caccgtgccg gtcagctctt
     1741 cgtacttgtc gttctttttc ccggggagca gcccgaagaa gcgtcggccg cccttctgtt
     1801 tcggacggta gttcgcggtt tccccagtgc gggagctcgc cgttgattgc aaccccgatt
     1861 cgacgcgcgt attcaattcc gtgatggaag tttccagacc gctaagtcgc gacgtgtcgt
     1921 acttctcggc cttctcctct ttcgcgacga gatcgttaac ttcgctcagg atcgatccga
     1981 cttccttgtc taagccacgc agccgctcgc gtgggtcgtc ggcgttcttc ttgtcgccct
     2041 tgtcgcccga gttcatcgcg gcgattgcgg acgaaagtga acggcgcatg gcttcgagct
     2101 tcgacctcat tatgctgagc cgctgagagt ttgaagcgtc gttctggccc tgcgcgtttg
     2161 gcaacgccaa cgccgcgacc gggtgcaaca cggggattac agacaaggcg gcgatgagca
     2221 gaagtgatga aaagactttc atcgaattac ggccgcggtt aaaaacaaga aacattggga
     2281 aacctccaaa aacaaaacgg gtcattctag actgacttcc tggggttggc taatcgctga
     2341 cgactcgc
//
LOCUS       DATDBY010000598         4424 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1063001, whole genome shotgun sequence.
ACCESSION   DATDBY010000598 DATDBY010000000
VERSION     DATDBY010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4424
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1063001"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="VIT19_11205"
     CDS             <1..631
                     /locus_tag="VIT19_11205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839594.1"
                     /translation="REVDEQIRITREALEKAERKSAVEEATGLNPLRQTLETELARAR
                     VEQSAAMARRSTLTGQLQQYQAALDQLESNTTGHNDLQRQVKEAEDNYQLYAKKREES
                     RIADELDRQKITNVSIAEAPTPAQLPTSPNRPLNLVLGIVLAGFLCIGSVVSAELLDD
                     TVHSARQLEALTGGPVLATVPENGRKMISQRASGARQVKGKKVRAELQA"
     gene            734..1444
                     /locus_tag="VIT19_11210"
     CDS             734..1444
                     /locus_tag="VIT19_11210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839595.1"
                     /translation="MQVQEQIIEPMLPVKAPAATGQRRHNLQLLLANLKNTAQGLRGG
                     AAIAFTSASGNEGVSHVTQLFAVEMARHTGRRTLVISAERLQTLGVEDYMQMPWNCHP
                     TNVENLWMLPAHRSRRVNGKGNHSEEDQELPKRSHLMRIGKQEEEVDTGLDSVDALRV
                     SFDNILIDCGPLHESGDAAVLASNVDGVVIVVEAGRSRRDQIVNAQRTIEQAGGKFLG
                     FVLNKRRYPVPEWLYKRL"
     gene            1568..2230
                     /locus_tag="VIT19_11215"
     CDS             1568..2230
                     /locus_tag="VIT19_11215"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEY5839596.1"
                     /translation="MKYKLLLVVAVLAISAPVVIRAQDQRPPRLSTVTEERYRLQPGD
                     VLEIQYRYSPEFNQTMTVQPDGYVSLEIGGDLKVAGLTIEQTRQAILRRASARLREPV
                     ATIVLKEFQRPYFVVSGEVAQPGKIEMRERVTAIQAIMLAGGMKETARSSQVVVFRKI
                     NSDMAEVKLLNLKSIRRTSDLENDLTLQPGDMVYVPRDKISKIERFMKLASVAAFMTP
                     IF"
     gene            2326..3765
                     /locus_tag="VIT19_11220"
     CDS             2326..3765
                     /locus_tag="VIT19_11220"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEY5839597.1"
                     /translation="MTARSGVLSNFVLKVTDLALVLSALGLTIVFRYSPSNNVEFAVD
                     YLSERIKVSNALLGIGLLITWHLAFAVQGLYLSHRFTTQLRELKEIARGVLICSLALL
                     VAAEAGKWPTVNLVTVALFGILSFSLIGAMRLLLRWNLRRLRRRGLNTKSLLLVGGGL
                     RGRRFGERLQARHDLGYKLIGYVDNERSFADQRIAGAIWLGTLEDLPLILANEVIDEA
                     AIALPIKSQYSEIEAAVGLLEEQGITTHLLSDMFPQKLARSQSGELNGVPIVSLHSVP
                     PFSWRTEAKRLIDVVGGTVLLTMLAPLFVLVAIAIKLESPGPVFFVQGRFGLNKRRFR
                     MIKFRTMHADAEERMKEIEHLNEKSGPIFKIRNDPRITPLGRWLRKTSIDELPQLINV
                     LLGDMSIVGPRPLSVRDALRMELAWQKRRFSVKPGLTCLWQVSGRSNLSFEQWMELDL
                     EYIDRWSLKLDASILLRTIPAIMTARGAS"
     gene            3772..>4424
                     /locus_tag="VIT19_11225"
     CDS             3772..>4424
                     /locus_tag="VIT19_11225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839598.1"
                     /translation="MFLASDRQQTRFFPGDLVVVRPVDEILTTLDEKGTLGKLPFMPE
                     MREFCGRQFRVSRRAFKTCVDDAEMRRLDDTVFLEDVRCGGEAHGGCDKACLIFWKEA
                     WLRPAGDIDRQPATREAKVDELDLLEFAKRGDQFFCQSSEIVNASKPLPWWEPRQYAL
                     DLLHNRISITQWLKGMFIAFFNKVAHVTGRQSWRFVAGPGTYNGTRSDLNLQPGDLVR
                     "
BASE COUNT          936 a         1225 c         1349 g          914 t
ORIGIN      
        1 gcgcgaagtt gacgaacaga ttcgcatcac gcgcgaagcg cttgaaaaag ctgaacgcaa
       61 gtcagcggtc gaagaggcga cgggtttgaa ccccctccgg cagacgctgg agacggaatt
      121 agcgcgcgct cgtgtggaac agagcgcggc gatggcgcgg cgctcaacgc tgacgggaca
      181 gttgcagcag taccaggcgg ccctggatca gctcgagtcg aacacgacgg ggcacaacga
      241 tcttcagaga caggtaaagg aagctgaaga caactatcag ctctatgcga agaagcgcga
      301 agagtcgcgc atcgctgacg aattggaccg gcagaagatt acgaacgtgt cgattgccga
      361 agcgcccacg ccggcgcagc ttcccacgtc gccgaatcgc ccattgaacc tggttttggg
      421 catcgtgctc gccggtttcc tgtgtattgg cagcgtggtt tcggctgagt tgctcgacga
      481 cacagtgcat tcggctcgac aactcgaggc gctaacaggc ggccccgttt tggcgaccgt
      541 gccggaaaac ggaagaaaga tgatcagcca gcgggcatcg ggggcgcgac aggtgaaggg
      601 aaagaaagtg cgggccgagt tgcaagcttg atgactggag cgcaagcgtc ccgcttgccg
      661 acccgttgcg agcctgacac ttgggcctaa tgaggatatg caagcgagac gcttgcgctc
      721 cagtcagtaa cttatgcaag ttcaagaaca aatcattgag ccaatgttgc cggtgaaagc
      781 gccggccgca accggtcagc gacgtcacaa cctgcaactg ctgctcgcga acctgaagaa
      841 cactgcccag ggtttgcgcg gcggcgcggc tatcgccttc acgtctgcat caggcaatga
      901 aggcgtttcg cacgtgaccc agctctttgc ggttgagatg gcgcgccaca ccggaaggcg
      961 caccctcgtg atttctgctg aacgtctgca aacgttaggc gtcgaagact acatgcagat
     1021 gccctggaac tgtcacccga caaacgttga gaacctctgg atgctgccgg cgcatcggtc
     1081 gcgtcgcgtg aatggtaagg ggaatcactc tgaggaagac caggaacttc cgaaacggtc
     1141 gcacttgatg cgcatcggca agcaggaaga ggaagtggac acgggtctgg attccgtcga
     1201 tgccttgcgc gtcagctttg acaacatcct gatcgattgc ggcccgctgc acgaatcggg
     1261 cgacgcggcg gtgctggcgt cgaacgtcga tggtgtggtg atcgtcgtcg aggccgggcg
     1321 ttcgcgccgc gatcaaatcg taaatgcgca gcgcaccatc gagcaggccg ggggcaaatt
     1381 tctcggattt gttttgaata aacggcgcta tccggtgccg gagtggttgt acaaaaggct
     1441 gtaaggcctt gcacgcggga cgcgtgcgta cccagtttcc ctcgcccttc cggggcttgg
     1501 gatcagggga gagggaatta cgtcgcgcgt caagaccctc tccccaaaaa tctctgaagg
     1561 taggaagatg aaatacaaac ttctcttagt tgttgccgtg ctggctattt cagcgcccgt
     1621 tgttattcgc gcacaggatc aaaggccgcc gcgtctctcg acggtgacag aggagcgcta
     1681 ccgcttacag cccggtgacg tgctcgaaat tcaatatcgc tactcgccgg aattcaatca
     1741 gacaatgacg gtgcaaccgg acgggtatgt ctcgctcgaa attggcggcg atctcaaggt
     1801 tgccgggctc accatcgagc agacccgcca ggcgatcctg cggcgcgcga gcgcgcgttt
     1861 gcgcgagccc gtggccacga tcgtgctgaa agaatttcag cggccgtact ttgtggtctc
     1921 gggcgaagtg gcccaacccg gaaaaatcga aatgcgcgaa cgcgtcacgg cgattcaggc
     1981 aatcatgctg gccggtggca tgaaagagac cgcgcgatcc tctcaggtgg tcgtgtttcg
     2041 aaaaatcaat tcggatatgg ctgaggtaaa gctgctgaac ctgaagagca tccgccgcac
     2101 aagcgatttg gaaaacgatt taacgctgca acccggggac atggtttacg tcccgcgcga
     2161 caagatttcg aagattgaac gattcatgaa actggcaagc gtcgcggcat tcatgactcc
     2221 gatattctga cttggagtgc ggcgacttgg cgccgctttc acaatctcca atcggctcga
     2281 tccggaaact aaaaagcggt gtcaagccac cgcactccaa atattatgac ggcacgatcc
     2341 ggagtccttt caaattttgt gctcaaggtc accgacctgg cgctggttct gtcagcgctg
     2401 ggcctgacga tcgtgttccg ttactcgcct tcgaataacg tcgaattcgc ggttgattat
     2461 ctttccgaac gcattaaggt gagcaacgct ttgctgggga tcgggctgct gatcacctgg
     2521 catctggcgt tcgcagtcca gggcctgtat ctctcgcatc ggttcacgac acaactgcgc
     2581 gagctgaaag agatcgcgcg tggtgttctg atttgttcgc tggcgctgct ggtcgccgcg
     2641 gaagccggga aatggccgac ggtcaatctc gtcactgtgg cgctcttcgg catcctctcg
     2701 ttttccttga tcggcgcgat gcgtctgctg ctgcggtgga acctgcgcag gttgcgccgg
     2761 cgcggactca acaccaagtc gctgctgctg gtaggtggcg gactgcgcgg gcggcgattc
     2821 ggagagcggc tccaagcgcg ccacgacctc ggatacaaac tcatcggata cgtagacaac
     2881 gaacgctctt ttgccgatca gcgaattgcc ggcgcgattt ggttgggaac gctcgaagat
     2941 ctgccgttaa tccttgcaaa cgaagtcatc gacgaagcgg cgattgccct gccgatcaag
     3001 tcgcaataca gcgaaatcga agcggcggtg ggattgctgg aagagcaggg aatcactacc
     3061 cacctgctgt cagatatgtt tccgcagaaa ctcgcgcggt ctcaaagcgg cgagttgaac
     3121 ggcgtcccga ttgtttcgct gcacagtgtg ccgcccttta gttggcgcac tgaagcgaag
     3181 cgtctgatcg atgtcgttgg cggcacagtt ctgctgacga tgctggcgcc gctgttcgtg
     3241 ctggtcgcga ttgccatcaa gctggaatcg cctggccccg tgttcttcgt tcagggtcga
     3301 ttcggcctga acaagcgccg ctttcgcatg attaagttcc gcacgatgca cgccgacgcc
     3361 gaagagcgga tgaaggaaat tgagcacctg aacgaaaagt ccggccccat tttcaagatt
     3421 cgcaacgacc cgaggattac gccgcttggt cgctggttgc gcaagacgag cattgatgag
     3481 ctgccgcaac tgatcaacgt gctgttgggc gacatgagca ttgtcgggcc gcggccgttg
     3541 tcggtgcgcg atgcgctgcg catggaactc gcctggcaaa aacgccggtt cagtgtgaaa
     3601 ccgggactga cttgtctctg gcaggtttcc ggtcgcagca atctctcgtt cgaacagtgg
     3661 atggaactcg atttggagta catcgatcgc tggtctttga aactcgacgc ctcaattctg
     3721 ctccgaacca tcccggcgat catgaccgcc cgtggcgcaa gttagtccac catgttctta
     3781 gcgtcagatc gacaacaaac caggttcttt cccggcgatc ttgtggtggt ccgcccggtg
     3841 gacgaaatcc tcaccacact cgacgagaag ggcacacttg gcaagcttcc cttcatgccg
     3901 gagatgcgtg aattctgcgg gcgtcagttc cgcgtttcgc gccgcgcgtt caagacctgc
     3961 gtggatgatg ctgagatgcg ccggctcgac gacaccgtat ttctcgaaga tgttcgttgc
     4021 ggcggcgaag cgcacggcgg ttgtgacaaa gcgtgcctga ttttttggaa ggaagcgtgg
     4081 ctgcggccgg ccggagatat cgatcgccag cccgcaaccc gcgaagcgaa agttgacgag
     4141 ctcgatctac ttgagttcgc gaagcgaggc gatcagttct tctgtcaatc gagtgagatc
     4201 gtcaacgcgt cgaagccgct gccgtggtgg gagccgcgtc aatacgcact cgatcttctg
     4261 cacaaccgga tttcgattac gcagtggctg aagggcatgt tcatcgcctt tttcaacaag
     4321 gtcgcccacg tgactggccg tcagagttgg cgttttgtgg ccggcccggg gacttacaac
     4381 ggcacccgct cagacctgaa tcttcaaccg ggtgatttgg tgcg
//
LOCUS       DATDBY010000599         3737 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_539675, whole genome shotgun sequence.
ACCESSION   DATDBY010000599 DATDBY010000000
VERSION     DATDBY010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3737
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539675"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="VIT19_11230"
     CDS             <1..522
                     /locus_tag="VIT19_11230"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF017200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S16 family serine protease"
                     /protein_id="HEY5839599.1"
                     /translation="DVMQESARAAQSYLWSHADQFGIPLEMFKEYGVHLHVPAGAIRK
                     DGPSAGVTITAALASLYTGRRVRPDTAMTGEITLSGLIFPVGGVKEKVLAAHRAGIHR
                     ILLPARNESDLDDIPEDVRRELEVVPLNRINEVMDAALEKFVANPPPPLPPPSDRPRH
                     AEPDPQPLIAKER"
     gene            complement(574..2061)
                     /locus_tag="VIT19_11235"
     CDS             complement(574..2061)
                     /locus_tag="VIT19_11235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839600.1"
                     /translation="MTTSPMKPYSTLALVIIISAVLFPPAANAQYPPCVDYSLAHREG
                     VSAPMGIITPYNPTLTLPAGSYRYTYGTTGSVPIQNFSLVSTPSLTYWSPFSYTIYLP
                     SASTTGISFKFYIPTAQPLCSAANVHIQFKRQTALAWNTTCTFDLNVVVRENGEPKNL
                     TVVEGQSKVYYAGGDYKAYSMTWNSPIAGAWNYAALNVVGGWGAVQIEGRMASFADGS
                     RIFFKGKDKKLYNLIQQSGNNWTLSLVMASLPDVTGGVAARNSNEVVFYGIGGLHQLL
                     LTGNTWTDQIIPCSACGPSNNSSVISLPPASNNIFFSIGSDLVQVYQNSSGGSWIFEK
                     INPANVPWGYIYDTTQLSSDMVAAENYAVYYRGRDKRIHRYTKCGATWKLDAMPISPA
                     SETNVVVLSAFLTKFPGEDRVFYKAATGRIYNIYNVNGVWFNYPLDNAMVNAAGDLIA
                     AENKIFYINHDKRVHGFFWGGSAWSDVPLSTTTPANVKGCINPYY"
     gene            2550..3029
                     /locus_tag="VIT19_11240"
     CDS             2550..3029
                     /locus_tag="VIT19_11240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839601.1"
                     /translation="MPKLSLRTIALMVSILLMGILLGGIVYSHIVYFPIYLSALPDSA
                     VLVNGPYALHEENFWLLIHPLAILSLIISLALNWKIRARRKLIIIPLVVYLLAIVATS
                     LYFVPELRAFQNSANLNVSPAEWFARGQRWQYLSWARGTLMGFSIVPLLLALRVRED"
     gene            complement(3080..3622)
                     /locus_tag="VIT19_11245"
     CDS             complement(3080..3622)
                     /locus_tag="VIT19_11245"
                     /inference="COORDINATES: protein motif:HMM:NF025482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4287 domain-containing protein"
                     /protein_id="HEY5839602.1"
                     /translation="MATTIKPRMSDEAVEAKTGKNWSRWFKHLDAAGGKKMTHQEIVA
                     HLRDKHDVRPWWTQMVAVTYEQARGLREKHEKPGGFEISVSRTIEAPIARAYKAWTDE
                     KTRKTWLPANLTIRKATTNKTLRITWEDDSTLAAAFYPKGPGKCQVVAQHGKLKDAKA
                     GAKMKKYWSDALERLKEEIE"
BASE COUNT          742 a         1005 c         1079 g          911 t
ORIGIN      
        1 gacgtcatgc aggaatccgc gcgcgccgca cagtcttatc tttggtcgca cgccgaccaa
       61 ttcggaattc ctctggagat gttcaaagag tacggcgtgc acctgcacgt gccggcgggt
      121 gcgattcgca aagatggccc atccgcgggt gtgacgatca cagcggcgct ggcgtcactc
      181 tacaccggcc gccgcgttcg gcccgacacg gcgatgacgg gagagattac cttgtcaggc
      241 ttgatattcc cggtcggcgg agtgaaagaa aaagttctgg ccgcgcatcg agccggcatc
      301 caccgaatcc ttcttcccgc ccgcaacgaa tcggatctgg acgacattcc tgaagacgtc
      361 cggcgcgaat tggaagttgt gccgctgaat cgaatcaatg aagtcatgga cgcggcgctt
      421 gagaaattcg tcgcgaatcc acccccaccg ctgccgcctc ccagcgaccg tccgcgtcac
      481 gccgagcccg acccgcagcc gttgatcgcg aaagaacggt agggggtacg gacttttagt
      541 ctgtgatcct cgtacagaag taatccgagc agattagtaa tacgggttga tgcatccttt
      601 cacgtttgcg ggagtggtag ttgagagcgg cacgtcagac cacgcggagc ctccccagaa
      661 aaagccgtgc acccgcttgt cgtggttgat ataaaaaatt ttgttttcgg cggcgatcag
      721 gtcgccggcc gcgttgacca tggcgttgtc gagtgggtag ttgaaccaca cgccgttgac
      781 attgtagatg ttgtagattc tcccggtcgc ggccttgtag aaaacgcgat cttcgcccgg
      841 gaatttagta aggaaggcgg acaggactac gacgttggtt tccgaagcgg gcgagattgg
      901 catcgcgtcg agtttccagg tggcgccgca tttcgtatac ctgtggatgc gcttatcccg
      961 ccccctgtaa tagaccgcgt agttctcggc ggcgaccatg tcgctgctga gttgggtagt
     1021 gtcgtaaatg taaccccacg ggacgttggc tgggttgatc ttctcaaata tccaggagcc
     1081 gccggagctg ttctggtaga cctggactaa atccgaccca atggaaaaaa agatgttatt
     1141 tgaagcgggc gggagagaaa tgaccgatga gttattggaa ggcccgcaag cggaacaagg
     1201 gatgatttga tccgtccacg tgtttccggt gagcaacaac tggtggagtc caccaatgcc
     1261 gtagaagact acctcattgc tgtttctggc cgccacgccc ccggtcacgt cggggagcga
     1321 ggccatcacc agcgagagtg tccagttgtt accgctctgc tgaatcaggt tgtatagctt
     1381 cttgtctttg cctttgaaaa agatgcgaga cccgtcggcg aagcttgcca tccgcccctc
     1441 tatctgcacc gccccccagc cccccaccac gttgagggcg gcatagttcc acgccccggc
     1501 aatcggactg ttccaagtca tcgagtacgc cttgtagtcg cccccggcgt agtacacctt
     1561 gctctgccct tcgacgacgg tcaggttctt tggctcgcca ttttccctga ctacgacatt
     1621 gagatcgaac gtgcaggtag tgttccacgc caacgctgtc tgccgcttga attgtatgtg
     1681 tacgttcgcc gcggagcaga gcggctgggc cgtggggatg tagaacttga agcttatgcc
     1741 ggtcgtcgag gcggagggaa ggtaaatggt atacgaaaac ggagaccagt aggttaagct
     1801 aggagttgaa actaagctga agttttggat gggtacgctt cccgtcgtgc cgtatgtgta
     1861 cctgtatgag cccgcgggca gggtcagggt ggggttatag ggggtaatga tccccatcgg
     1921 ggcggagacc ccctctctgt gggcgaggct gtagtctacg cagggcgggt actgagcgtt
     1981 ggccgccggc gggaacaaca ccgccgatat gattattacg agagcgagcg ttgagtaggg
     2041 cttcatgggt gaggtcgtca ctgtgattct ccatttcgag gtgagttgtt gtaaggagta
     2101 gcgccgcaat ctttgccagc aagtccgcat tccaggatgc ccgaaagccc ttgagatcgc
     2161 tgagcggcct ttatataacc gccttttact cctatccact ttagaattca agctttcttc
     2221 gagacaggca atgagcagga acgtctaatt gaaagccccg ctagtgagga tccctatgac
     2281 cttgacggtc atcttgagca cagttctagt aataccccgc agcgctgcgt cgaaatttgc
     2341 aacgccaagg gcttcgctta cgcgggtgtt caatatgggc aaagctgcct ttgcggaaac
     2401 agttacggca aattcgggcc agccgacaac tgtaatatga aatgcacggg cgatagcagc
     2461 caaatttgtg gcggctacaa ctccaatggt gtgtatggaa cgggcgttag cgtgggcggc
     2521 gatgaatgag gcggtaagga gataaacgag tgccaaagct gagtctaaga acaatcgcgt
     2581 tgatggtttc aattctgctg atggggatcc tgctcggcgg catcgtctat tcacacatcg
     2641 tctattttcc catttatctt tcggcgctgc ctgactctgc agtgttggtg aacggtccgt
     2701 acgcgctgca cgaggaaaat ttctggctgc tgattcatcc gctggcgatt ctctcgctga
     2761 ttatttcgct ggcgttgaat tggaaaattc gcgcgcggcg aaaactcatc atcattccac
     2821 tcgttgttta cctgctcgcg attgtcgcga cgagtttgta ctttgttcct gagctgcgtg
     2881 catttcaaaa cagcgcgaat ctaaatgttt cgccggctga gtggtttgcg cgcggacagc
     2941 gctggcagta tttgagttgg gcgcgcggaa ccttgatggg gttcagtatc gttccgctgc
     3001 tactcgcttt gcgcgtgcgt gaggactagg tggcacgcgc atcctgcgcg tggtccacgg
     3061 gcgagacgtc cgtgccactt tattcgatct cctctttcag ccgctcgagc gcatcgctcc
     3121 agtacttctt catctttgct cccgccttcg cgtctttcag cttgccgtgc tgcgccacga
     3181 cctggcactt gccggggcct ttcggataaa aagccgccgc gagggttgag tcatcctccc
     3241 acgtgatgcg gagagttttg ttcgtcgtcg ctttgcggat cgtaaggttc gccggcagcc
     3301 acgtcttgcg cgtcttctca tccgtccagg ctttgtaagc cctggcgatc ggcgcttcga
     3361 ttgtgcgact gacgctgatt tcaaacccgc cgggcttctc atgcttctcg cgcagcccgc
     3421 gcgcctgttc gtacgtgacg gcaaccatct gtgtccacca gggtcgcacg tcatgcttgt
     3481 cgcgcaggtg cgccacgatt tcctgatgcg tcattttctt tccgccggca gcgtcgagat
     3541 gcttgaacca gcgcgaccag ttcttgcccg ttttcgcttc gacggcttcg tcactcattc
     3601 tgggtttgat tgtagttgcc atccgaatca cagttccaag tttcaagttt caagtttcag
     3661 gtttcaggtt tcaggtttca agttccaagt tttaggttca agttgagttt gccaacttga
     3721 aactttgaac ttgaaac
//
LOCUS       DATDBY010000600         3643 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_828442, whole genome shotgun sequence.
ACCESSION   DATDBY010000600 DATDBY010000000
VERSION     DATDBY010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3643
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_828442"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VIT19_11250"
     CDS             complement(<1..270)
                     /locus_tag="VIT19_11250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839603.1"
                     /translation="MNRLTLVVLGTFTAILLISGGLSYVLRHQTKLDNAAVTADAGVG
                     TGATTRPSPSPQTQKTGGGSIFGDLFGQDNPDVHPATSGSWQSTAA"
     gene            complement(316..2529)
                     /gene="ppk1"
                     /locus_tag="VIT19_11255"
     CDS             complement(316..2529)
                     /gene="ppk1"
                     /locus_tag="VIT19_11255"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:NF003921.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEY5839604.1"
                     /translation="MTSKRKQTLFDPERKANLPKRSRTDQFLAWSVFNRDLMQLEFFR
                     RLLEEAADNSVPLLERLKFLAVFSSNLDEFFMVRVSGLKEMLEADELEPMPGELTPID
                     QLRVIRERVVPMVKEHSRLLRDTVLPGLKEAGVEIVSYSSLNKTEKRGLAEYFKKNVF
                     LMLTPQAVDPSRPFPYMSNLSLNIGLTAERHADHAHTGALISGEFASEDTVRFVRIKV
                     PPLCQRLVPVTQTENRFVLLEELIEANIQELFVSAQLSEGYLFRVTRDADVEIREDKA
                     ADLLGMIKESLRERRFGLPVRLEVSSKMPPQMVEYLTQSLEIKPDDVYEVDSVLSAGG
                     LMQLYDLDLPDLKDKPIQMTVPAALRRKVSPFEALKKQDVLLHHPYTSYTTVVDFIQD
                     AARDPQVVAIKICLYRTGKNSPIPKALIEASERGKQVTAVVEIKARFDEENNIEWATR
                     LAEAGVHVVYGLVNLKTHSKVALVVRREDDGLKTYTHVSTGNYNPTTSRLYTDLGVLT
                     SDPEIGEDATDLFNFLTGFSLQKEYKRLMIAPVNLRGRMLKLIERETNNAEAGRPAGI
                     TAKINRLTDLDTIDALYRASQAGVKIDLIVRGSCMLRPGVSGLSQTVHVRSIVGRFLE
                     HSRIFHFANGGEDEVYIGSADWMARNMDRRVEVVTPILDPAHRAYLKDVVLSAYLRDN
                     VTARILTADGEYKKPTIGVGEEPFNSQLFFEGRNSSPAGGSVHPLKRRLWARPAQ"
     gene            complement(2645..>3643)
                     /locus_tag="VIT19_11260"
     CDS             complement(2645..>3643)
                     /locus_tag="VIT19_11260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839605.1"
                     /translation="WRAPDPGYDPALGYSLSAGPRRGSPPVDANGLARAIQCVANKDE
                     TPGAGTTPKFHCSVPGNVDGDGELVRYKVKPHFKGQAKDRRNGEIQGEFLSSRFSQAL
                     GFFADDEWVADVNCPDCQKSLTKGFQGAQWSPFQPAAGIEMSLGRGIDVNCNNKDAAG
                     LSETLAKLSSNGAPRAEIDAFKLWLGFIDHGDTKTDNHKIACLDSTRDGNRRACKPGQ
                     AVFYVGDMGSTFGYSSASENKAKLDGWKKKDPIKVSGGQCTTAAKSVGDAKISEAGRQ
                     LLADGLQRLLDAERTNGTITKVFRASRNAERDRPAEEWTAEFTRKANMIINARCSN"
BASE COUNT          737 a         1063 c         1012 g          831 t
ORIGIN      
        1 cgccgccgtc gattgccaac tgccggaagt tgccggatgc acatcgggat tgtcttgccc
       61 aaacaagtcg ccgaaaattg agccgccgcc ggtcttttga gtttgaggcg aaggcgatgg
      121 tcttgtcgtc gcacctgtgc ccacgccagc gtcggcggtc accgcggcgt tatcgagctt
      181 tgtttgatgg cgcagcacgt aagacagccc gccgctaatc agcaagatcg cggtgaacgt
      241 ccccagcact accagcgtaa gcctgttcat gtcttaatcc cttcgtttcg agcgatggcg
      301 cgctgaagaa caagttcact gcgcaggcct cgcccacaag cgacgcttca gcggatgaac
      361 actaccgccc gccggcgagc tgttgcgtcc ttcaaaaaac agttggctgt tgaatggttc
      421 ttcgcccaca cctattgtcg gtttcttgta ctctccgtcg gcggtcaaaa tacgcgccgt
      481 aacgttgtcg cgcaggtacg cggacagcac gacatctttc agataggccc ggtgtgccgg
      541 atcgagtatc ggcgtcacaa cctcgacgcg acgatccata tttcgcgcca tccagtcggc
      601 cgagccgatg taaacctcgt cttctccgcc attggcaaag tgaaagatgc ggctgtgttc
      661 aagaaagcgg ccgacaatgc tgcggacgtg gacggtttgg gagagaccgc taactcccgg
      721 ccgcaacatg catgagccac gtacaatcag atcgattttc acgcccgctt gcgacgcgcg
      781 ataaagcgcg tcgatcgtgt cgaggtcggt aaggcgattg attttggccg taatgcccgc
      841 cggacgtccg gcttcggcgt tgttagtctc gcgctcgatt agcttcagca tgcgaccgcg
      901 caggttaacc ggcgcgatca tcagccgctt gtattctttc tggagcgaaa aacccgtgag
      961 aaagttgaac aggtcggtgg catcctcgcc gatctccgga tcgctcgtca ggacacccag
     1021 gtcggtgtaa agccgtgacg tcgttggatt gtaattcccc gtagagacgt gcgtgtacgt
     1081 ctttagaccg tcgtcttcgc ggcgcacgac caacgcaact ttactgtgcg tctttagatt
     1141 aaccagaccg taaacgacgt gcacgccggc ttccgccaga cgcgtggccc attcgatatt
     1201 gttctcttcg tcgaaacgcg ccttaatttc gacgacggcg gtgacttgct tgccgcgctc
     1261 gctcgcctcg atcagggcct ttggaattgg cgagttctta ccggtgcgat aaagacaaat
     1321 cttaatcgca accacttgcg gatcacgcgc ggcatcctga atgaaatcaa cgaccgtcgt
     1381 gtaagacgtg tacggatgat gcagcaggac gtcctgcttc ttaagcgctt cgaagggcga
     1441 tactttccgc cgcaacgcgg ccggcacggt catctggatc ggcttatctt tgagatcagg
     1501 cagatcgaga tcgtaaagct gcattaggcc gccagcgctg aggaccgagt caacttcata
     1561 aacatcatcc ggcttgattt cgagagattg ggtcaaatac tcgaccattt gggggggcat
     1621 cttcgatgag acttccagtc tgaccggcag tccgaaccgg cgctcgcgca gtgactcttt
     1681 gatcatgccc aaaagatcgg ccgccttgtc ttccctgatt tcgacgtccg cgtcgcgcgt
     1741 gacacgaaag aggtaacctt cgctcaactg cgcgctgaca aacagttcct gaatgttcgc
     1801 ttcgattaat tcttccagga gcacaaacct gttttcggtt tgcgttaccg gcacgagcct
     1861 ttgacagagt ggtggcactt tgatgcggac aaaccggact gtgtcctcgg atgcaaactc
     1921 gccgctgatt agcgcgccgg tatgagcatg atcggcgtga cgctcggccg tcagtccaat
     1981 gttcaaactc agattggaca tgtagggaaa cgggcgggac gggtcgaccg cctgcggcgt
     2041 gagcatcaga aaaacattct tcttaaagta ctccgccaac ccccgcttct cggtcttatt
     2101 caaagaagag taagagacga tctcgacgcc tgcctctttc agcccgggaa gcactgtgtc
     2161 gcgcaacaaa cggctgtgtt ctttaaccat cggcacgaca cgctcgcgaa tgactctcaa
     2221 ctgatcgatg ggcgtcaatt cgccgggcat aggttcgagt tcatcggctt cgagcatctc
     2281 tttcaaaccc gaaacccgaa ccatgaagaa ctcgtcgaga ttgctggaga agacggccag
     2341 aaacttaagc cgctcgagca ggggcacgga attgtccgcc gcctcctcga gtagcctgcg
     2401 gaagaactcc agttgcatca ggtcgcggtt aaaaaccgac caggcgagaa attgatccgt
     2461 gcgcgatcgc ttggggaggt tcgcttttcg ctcaggatcg aacagagttt gttttctttt
     2521 agatgtcata ctggctttac agttcccctc cccgctggcg gggaggggcg gaggggtggg
     2581 gttgacggcg tcggcctaac ctctccccta acccctctcc gcctgcggag aggggaaacg
     2641 ccctttaatt cgagcaacgc gcgttgatga tcatatttgc tttgcgggtg aactcggccg
     2701 tccactcctc ggccggacga tcgcgttcgg cgttgcgtga cgcgcgaaag accttcgtga
     2761 tcgtgccgtt cgtcctttcg gcatccagca gtctttgcaa accgtcggcc agaagctgac
     2821 ggccagcttc gctgattttc gcatcgccga cacttttcgc ggcggtcgtg cactgtccac
     2881 cgctgacttt gattggatct tttttcttcc aaccatcgag ctttgctttg ttctcgctgg
     2941 cgcttgagta accaaacgtt gatcccatat cgccgacgta gaagacggcc tggccgggtt
     3001 tgcacgcgcg ccgattgccg tccctggttg aatcgagaca tgcgatcttg tgattgtcgg
     3061 tcttggtgtc accgtgatcg atgaacccca gccaaagttt gaacgcatcg atctccgccc
     3121 gcggcgcgcc attgctcgaa agcttggcaa gagtttcgga caatccggct gcatctttgt
     3181 tgttgcagtt cacatcgatc ccgcggccga gtgacatctc gattccggca gcgggttgaa
     3241 acggactcca ttgagcgccc tgaaaaccct tcgtgagact cttctggcag tcaggacaat
     3301 tcacatccgc aacccattca tcatcggcaa agaagccgag cgcttgtgag aaccttgacg
     3361 acaggaactc tccctgaatt tctccgttgc ggcggtcctt cgcttgcccc ttgaaatgcg
     3421 gcttcacttt gtagcggacc agctcgccat ctccgtcaac attgccaggc acagaacagt
     3481 gaaatttcgg ggtcgtaccg gccccgggag tttcgtcctt gttggcgacg cattgaattg
     3541 ctcgcgcgag cccattcgca tcaaccggtg gtgaaccgcg gcgtgggccg gcgctcaagc
     3601 tgtagcccag ggccgggtca taacccgggt cgggcgcgcg cca
//
LOCUS       DATDBY010000601         2136 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1922260, whole genome shotgun sequence.
ACCESSION   DATDBY010000601 DATDBY010000000
VERSION     DATDBY010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1922260"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            207..>2136
                     /locus_tag="VIT19_11265"
     CDS             207..>2136
                     /locus_tag="VIT19_11265"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEY5839606.1"
                     /translation="MLKTFSWKSLLLSLGLALLAGAAACAIWRAGLIDSLQAAFVVSV
                     ARGDQPLQAPQTWLALLLIVTISTTAGFFVGRVGARRSFLFLGIGFLATCTASLLVSR
                     YLKIDILFAPMAVGSAAAVFLVQLHRLWLIDTLLTRRVNETISRTDAQDVSIAENRLT
                     SGLKLLQTILPLEEAFVFQPNEDGALVPCARLRAQASGSVQAGRNSVWRKLVQLCDKA
                     AKKHEIALAPIGEIDTLENVAMPLQHGGRTVGTLLLRLRESFDQSDRRLLAAVGGQLA
                     RDLQREDAQRKKLDSNLPAFVSARTSGHRLHAFDLISGVLTEHRFGAQVLAEASDGYA
                     IAYLDGTIAYVNPAMLWAARLNNHDAPKTDLFGLLDRFKSGVFDEPAIAVRRVLQSGE
                     PYERELKFPDRNQTLELRIALAKERNGNGSNGHGSNVNGLNGNGLNGNGLNGNGAGAK
                     PLCFAIRVRDVTRMKEFEKLKSDMISLMSHELRTPLTSINGFAELLVTDDNIPAESRE
                     FLQIISNESQRMSRMIDTFLTVTQLERADKQEVTKIALRLDEVVNETVNVMQPTAKKK
                     RIRLVEQSNGSIPPVSADKSLITQALTKLLDNAIRYSPERTTVTVSTVLEAEAVRVVV
                     DDRGYGVPQDSMDRIWEKF"
BASE COUNT          463 a          619 c          600 g          454 t
ORIGIN      
        1 ctcatagttt ttcgaactcg gtataccgcc tccggcgtgc tgcatgtcag aggcatgcgt
       61 accggaaatc tcgtaaccag ccgttttcct cggaaaagtg gccgaaattt gcacgcccca
      121 aacctcatgc cgatgtgtat aatcaattag ccacgaaatg tggcgacctc acctcccgat
      181 ccgagtacca ctccttagca aaccaagtgt taaagacgtt ctcctggaaa tctctgctgc
      241 tatcactggg tctggcttta ttggccggcg cggctgcttg tgccatttgg cgcgcaggtc
      301 taatcgattc actccaggca gccttcgtcg ttagtgtcgc tcgcggcgac cagccactcc
      361 aggcgccaca gacctggctg gccctcttgc taatcgtcac gatcagcact acagcgggat
      421 tttttgtggg ccgcgtcggc gctcgtcgat cctttctgtt tttgggcatc ggttttcttg
      481 ccacttgtac cgccagcctg ctcgtctctc gctacttgaa gatcgacatt ctgtttgcgc
      541 cgatggccgt gggttcagcc gctgcggtgt tcctcgtgca actgcaccgg ctctggctga
      601 ttgatactct gctgacccgg cgcgtgaacg aaacgatttc gcggaccgat gcgcaggatg
      661 taagcattgc cgagaatcgt ttgaccagcg ggctcaagtt gctccagacg attctgcctt
      721 tggaagaagc cttcgtcttt caaccgaatg aagatggcgc actcgtaccg tgcgcgaggc
      781 tgcgcgcaca agcgagcggt tcggtccagg ccggccgtaa ttctgtctgg cggaaactcg
      841 tgcagctctg cgacaaagcc gcaaagaaac atgaaatcgc gctcgcgccg attggcgaga
      901 tcgacacgct cgaaaatgtt gcgatgccgc ttcaacatgg cggtcgcacc gtcggcacgt
      961 tgctgctgcg cttacgcgaa agttttgatc aaagtgatcg ccgcttgctc gccgccgtgg
     1021 gtggacaact tgcacgtgat cttcagcgcg aagatgccca gcgcaaaaag ctcgacagca
     1081 atctaccggc gtttgtttcg gcccgcactt ccgggcaccg cctgcatgcg ttcgatttga
     1141 tcagcggcgt gctgaccgaa catcgatttg gcgcgcaggt gctggcagag gcgtcagacg
     1201 gctacgcgat cgcttacctc gacgggacca tcgcgtacgt gaacccggcg atgctttggg
     1261 ccgcgcgcct gaataaccac gacgcgccga agaccgatct gtttggcctg ttggatagat
     1321 tcaaatcagg agtttttgac gagccggcca tcgccgtccg tcgcgttttg cagtcaggcg
     1381 agccgtacga gcgagagctg aaatttcccg accgcaatca gacactcgag ctacgaatcg
     1441 cactcgcaaa agagcgcaac ggtaatggct caaacggtca tggctcaaat gtaaacggcc
     1501 taaacgggaa cggcctaaac gggaacggcc taaacgggaa cggcgcgggc gcgaagccgc
     1561 tctgcttcgc gattcgagtg cgcgatgtca cgcgcatgaa agagttcgag aagctgaaga
     1621 gcgacatgat ttcactgatg tcgcatgagc tacgcactcc cctcaccagc atcaacggct
     1681 tcgcggagtt gctcgtcacc gacgacaaca ttcccgcaga atcacgcgag ttcctgcaaa
     1741 tcatatcgaa cgaatcgcag cgcatgtcgc gcatgatcga tacgtttctg accgtgacgc
     1801 agcttgagcg cgcagacaaa caggaagtga cgaagattgc cctgcggctc gacgaagtcg
     1861 tcaacgagac agttaacgtc atgcagccca ccgcaaagaa gaagcgcatt cggttggtgg
     1921 aacagagcaa tggctcgatt cctccggtgt cggccgacaa gagtttgatt acacaggcgc
     1981 tgacgaaact tctcgacaac gcaatcaggt acagtccgga acgcacgacg gtcaccgttt
     2041 caaccgtgct cgaagccgaa gccgtgcgcg tcgtagtcga cgatcgaggc tatggcgtgc
     2101 cgcaggattc aatggatcgg atttgggaaa agttct
//
LOCUS       DATDBY010000602         5123 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2134520, whole genome shotgun sequence.
ACCESSION   DATDBY010000602 DATDBY010000000
VERSION     DATDBY010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5123
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2134520"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1713
                     /locus_tag="VIT19_11270"
     CDS             <1..1713
                     /locus_tag="VIT19_11270"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HEY5839607.1"
                     /translation="IPKRPFPIFRDRDELPGASDLGGKLQEALRRSRSLIVICSPKSA
                     VSKWVNEEVKAYKALGHDGRVLCLMVDGEPNAAPDSGLLECFPPAVRFQVTPDGQVTT
                     EPAEPIAADARPGKDGKTNALLKLLSGVMGVGYDELRQRERQRQRQRRMRFAALGVVA
                     LFLIAVVYVAVADAGLNLPASARIRTALDRNDASVFRPVRSNTEIRQAASTMRRELLD
                     GLKRGQTAKGGIRASLNPATKAGFEYWSNGQALTGIFLTPELSEADARQLLKGFEEHF
                     ESGSAIEGEDGRKYGWIAHPKEKRTQAEPGIWTVAALAAALGRPGLLTGADRERALKQ
                     LAYAQEALRIYRPDNADGWNMFPNQEDPHLHNVYTTTLALLALLETRKANLPWEGSVE
                     KRDQLLKATAQWLVDQFDDKASPAGWNAKSETHSAAIDGLTLQIYGELLRAEAEAGFT
                     LPARIADQVPDHLAKCIERDLNFPADSGEFAAFFTDHLGQQYMAREALGFLWYPWAMN
                     SAQLWLLRAEKVGAPKEDQVRVRRALGHLVNGLGNEAVRKYKSEWTFQAAETLYGLSA
                     IPPQ"
     gene            complement(1734..2183)
                     /locus_tag="VIT19_11275"
     CDS             complement(1734..2183)
                     /locus_tag="VIT19_11275"
                     /inference="COORDINATES: protein motif:HMM:TIGR01994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HEY5839608.1"
                     /translation="MSELSDLYQEVILDHNKKPRNFRKLENANRSAQGFNPLCGDQLN
                     VYLEIENDQVKDVSFEGSGCAISKASASMMTQAVKGKTKVEVEALFNEFHRMAMGELD
                     EETEANQLGKLKIFSGVRDYPARVKCATLSWHTMHAALEGADTATTE"
     gene            complement(2332..3597)
                     /locus_tag="VIT19_11280"
     CDS             complement(2332..3597)
                     /locus_tag="VIT19_11280"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020359689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEY5839609.1"
                     /translation="MAAVEELIPIKPKPRDEWNVERVRKDFPVLSTSVHGRPLVYLDN
                     AASSQVPQLVIERGSQYLKYEHSNIHRGVHYLSMKATNAYEGAREKVKRFINARDVKE
                     CIFVRGATEGINLVMHGYGRKFIGAGDEIIISAMEHHANIVPWQMLCEEKGAKLRVIP
                     MNDAGELLIDEYEALLNDKTKLVAIGHVSNALGTVNPVKQMIDSAHKYGVPVLIDGAQ
                     WVPHMRVDVQDLDCDFYVFSGHKMFAPTGSGVVYGKEHLLEKMNPFQGGGDMIKSVTF
                     EKTLYAGLPNKFEAGTPAIASQIGLGAAIDYLHIIGQEKAAAYEHGLLEYATRRLSAI
                     EGVRIIGTAREKLGVLSFTIENVHPHDIGTILDQQGIAIRAGHHCAQPVMKRFNLPAT
                     ARASFAFYNTKEEADALAEAVEKVIEIFS"
     gene            complement(3602..4930)
                     /gene="sufD"
                     /locus_tag="VIT19_11285"
     CDS             complement(3602..4930)
                     /gene="sufD"
                     /locus_tag="VIT19_11285"
                     /inference="COORDINATES: protein motif:HMM:TIGR01981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HEY5839610.1"
                     /translation="MVSEIAHTNVYDAAFRELLSQQSGEPAWLRRAREDAFAEFDRVG
                     FPTVREEDWKYTNTALIARTAFTPSFGSATKLNGELSKFTFEEARDSRLVFVNGIFQR
                     ESSSVSNLPAGVVVVNLAEALARPEYESLLSSHFEGGHDNGFTALNAALFVSGAFLLI
                     PRGVEVTVPIHLLFISETTNGHTPASFPRVHILAEENSSAAIVESYAGMTEGRYLTDA
                     VIDVTVKPGARIRHYRIQRESADAFHIATTKARTSRDSAYETTSINLGGLLARHDIEV
                     TLDDEGSHCAVDGLYLIGADQHSDTHSLIDHRHPHGTSRQLYKGVLDGKSRAVFNGKV
                     FVRHGAQQTDAQQTNKNLLLSEEAHVDTKPQLEIFADDVKCAHGAAVGQLSEDELFYL
                     ESRGINPALARNLLTYGFAEEVIERIKVDSVRNDLNRFLLNRLNTNLEIA"
     gene            complement(4932..>5123)
                     /locus_tag="VIT19_11290"
     CDS             complement(4932..>5123)
                     /locus_tag="VIT19_11290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012726854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839611.1"
                     /translation="AVILVTHYQRLLNYIIPDFVHVLSGGRIVKEGGKELALELEEKG
                     YDWLKSSNGKPAVSAPAAR"
BASE COUNT         1083 a         1436 c         1444 g         1160 t
ORIGIN      
        1 attccgaaac gaccatttcc tatctttcgc gatcgcgacg aattgccggg cgcttccgac
       61 ctcggcggca agcttcagga ggcactcagg cggtcgcgtt ccttgatcgt gatttgctcg
      121 ccaaagtccg cggtttcgaa atgggtcaac gaagaagtca aagcctacaa agcactcggt
      181 cacgacggtc gcgtcctgtg cctgatggtt gatggtgagc caaacgccgc gccggacagc
      241 gggctgctcg aatgtttccc gccggcagtc cggtttcagg taacgcccga cggccaggtc
      301 accactgaac cggccgaacc gattgcggcg gacgcgcgtc cgggcaaaga tggaaaaaca
      361 aatgcgctgc tgaagttgct ctcgggcgtg atgggcgtcg gttacgacga actgcgccaa
      421 cgcgaacgtc aacgccagcg acagcggcga atgcggtttg cggctctcgg tgtcgtggcg
      481 ctgtttttga tcgccgtcgt ttacgtcgcc gtggctgatg cgggtctaaa tcttcccgcc
      541 agcgcgcgta tccgcacagc tctcgatcga aacgatgctt cagtatttcg acctgtaaga
      601 agcaataccg agattcgcca ggctgcttct acaatgcgtc gagagctttt ggacggtttg
      661 aaacgcggcc aaactgcgaa gggaggaatc cgcgcaagcc tgaatccggc aacaaaggcc
      721 ggtttcgaat actggtcaaa tggccaggcg ctaaccggca tattcctaac cccggagctt
      781 tccgaagccg acgcgcgcca acttcttaaa ggtttcgaag aacactttga aagcggttca
      841 gcaatcgaag gagaagatgg gcgaaagtat ggttggatag cgcatcccaa agaaaagcgg
      901 acgcaggctg agcctggcat ctggacggtt gccgctctgg ccgccgcgct tgggcggccg
      961 gggttgttga cgggcgcaga ccgcgaacgc gcgttgaagc agctcgcgta cgcgcaagag
     1021 gctctgagga tctatcgccc ggacaacgct gatggttgga acatgtttcc aaatcaggaa
     1081 gacccgcacc tgcacaatgt ttacacgact acgctggctt tattggcatt gctggaaacg
     1141 cgaaaagcga atcttccgtg ggaaggcagt gtcgaaaaac gtgatcagct gctgaaggcc
     1201 accgcgcagt ggttggtaga tcaattcgac gacaaagcca gtcccgccgg ttggaatgcg
     1261 aagagtgaaa ctcactccgc cgctattgat ggtctgactc tgcaaatcta tggagagctt
     1321 ttgcgcgctg aagctgaagc cgggtttacc cttcctgctc gcatagccga tcaagtccct
     1381 gaccacctgg cgaagtgcat agagcgcgac ctgaactttc cggccgacag tggcgaattc
     1441 gccgctttct tcaccgacca tcttggacag caatatatgg cgcgagaggc tttgggattt
     1501 ctctggtatc cgtgggcgat gaactcagcc caactttggc ttctgcgggc ggagaaggtt
     1561 ggagcgccga aggaagacca ggtgcgtgtg cgccgcgcgc tcggtcacct ggtcaacggt
     1621 ttaggcaatg aagcggttcg caagtacaaa tctgaatgga cgtttcaagc agccgaaact
     1681 ttgtatgggt tatcggcgat tccgccgcag taggcgggcg ttttcagata tttctattcc
     1741 gttgtcgcgg tgtccgcccc ttccagcgcc gcgtgcatcg tgtgccagga aagcgtcgca
     1801 cacttaacgc gggccggata atcgcgaacg ccggaaaaaa tcttcaattt accgagctgg
     1861 ttcgcttcgg tttcctcgtc cagctcgccc attgccatgc gatgaaattc gttgaagaga
     1921 gcttcgacct caaccttggt ctttcccttc accgcctgcg tcatcatgct ggccgaagct
     1981 ttcgagatcg cgcagcctga gccttcgaag ctgacatcct tcacctggtc gttttcaatt
     2041 tcgagataaa cattcagttg atcaccgcag agcgggttga aaccctgcgc cgaccggttc
     2101 gcattttcga gtttacgaaa attgcgcggc ttcttgttgt gatcgaggat gacttcctgg
     2161 taaaggtcgg agagttcaga cataggaaag gatgacaatt gtacttcgta cttcgtgctt
     2221 tgtgcttcgg ctttggtgct tggtgcttgg tgctttgagt ttacgtcttt gaaagcaatg
     2281 acgacaggaa attgagaact aagtacaaag ctcaaagtac aaagttcaaa gttagctaaa
     2341 aatctcgatc accttttcga ctgcttccgc caaagcgtcc gcctcttctt tcgtgttata
     2401 gaacgcgaac gacgcgcgcg cggtcgccgg cagattgaat cgcttcatca ccggttgcgc
     2461 gcaatgatgc ccggcgcgta tggcgatgcc ctgctgatcc agaatcgtgc caatgtcgtg
     2521 cggatggacg ttttcaatgg tgaatgacag cacgccgagt ttttcgcgcg ccgtaccgat
     2581 gatgcggacg ccttcgatcg ccgacagacg cctggtcgcg tactccagta gcccgtgttc
     2641 gtaggcggcg gccttttcct ggccgatgat gtgaagataa tcgatggcgg cgcccaggcc
     2701 gatttgcgac gcaatcgcgg gcgtgccggc ttcgaattta ttcggaagtc cggcgtaaag
     2761 cgtcttttca aacgtgacgc tcttgatcat gtcgccgccg ccctgaaagg gattcatctt
     2821 ttcgagcagg tgctctttgc catagacgac gccgctgccg gtcggcgcga acatcttatg
     2881 accggaaaag acgtagaaat cacaatcgag atcctgcaca tcgacacgca tgtgtggcac
     2941 ccactgcgcg ccgtcgatta agaccggcac gccgtacttg tgcgcgctgt cgatcatctg
     3001 cttgacggga ttgacagtgc ccagcgcgtt cgacacatgg ccgatcgcga cgagctttgt
     3061 cttgtcgttc agcagtgctt catattcatc gatcagcaac tcgcccgcat cattcatcgg
     3121 gatgacgcgc agctttgcgc ccttctcttc gcacagcatc tgccacggaa caatgttggc
     3181 gtggtgctcc atggccgaga tgattatttc atcgcccgcg ccaatgaatt tccggccata
     3241 gccgtgcatc accagattga tgccttcggt cgcgccgcgc acaaagatgc attccttcac
     3301 atcgcgcgcg ttgatgaagc gcttgacctt ttcgcgcgcg ccttcgtacg cgttcgtcgc
     3361 cttcatgctg aggtaatgca cgccgcgatg aatgtttgag tgttcgtatt tcaggtactg
     3421 actgccgcgc tcaatcacta actggggcac ctgagaggat gcggcgttgt cgagatacac
     3481 gagcggcctg ccgtgtacac tcgtgctcag gacgggaaaa tctttccgga cacgttcaac
     3541 gttccactcg tcgcgcggct ttggctttat tggaatgagt tcttcaacag cagccatcgg
     3601 ctcaagcaat ctccaggttc gtattaagac gattcaacaa gaaccgatta aggtcgttcc
     3661 tgaccgaatc aaccttgatc cgctcgatca cttcctcggc aaacccatac gtcaacaggt
     3721 tgcgcgccag cgccggattg atgccgcgac tctcgagata gaagagttca tcctcgctca
     3781 gttgtccaac ggccgcgccg tgcgcgcatt tgacgtcgtc ggcaaaaatt tccaattgcg
     3841 gcttcgtatc gacatgcgct tcctcagaca gcaaaaggtt cttgttcgtt tgttgcgcgt
     3901 ccgtctgctg cgcgccatgc cggacaaaca ccttgccgtt aaagaccgcg cgcgacttgc
     3961 catcgagaac gcccttgtag agttgccggc tggtcccatg cgggtgccgg tgatcgatca
     4021 acgaatgtgt atcgctgtgc tggtcggcgc caatcagata gaggccgtcg acggcacaat
     4081 gactgccctc gtcatcaagc gttacctcga tgtcatgccg cgcaagcaat ccgccgagat
     4141 tgatactggt cgtttcatag gctgaatcgc ggctggttct ggctttcgtc gtcgcgatat
     4201 gaaaagcgtc cgcgctctcg cgttgaatgc gatagtgtct gatgcgcgca ccgggtttga
     4261 cggtcacgtc gataaccgcg tcggtcaaat aacgcccttc ggtcatgccg gcgtacgact
     4321 ccacaatcgc ggccgaacta ttttcctcag caagaatatg cacgcgcgga aaagatgcgg
     4381 gcgtatggcc gttcgtcgtt tccgaaatga aaagcaggtg aatcgggacg gtcacttcga
     4441 cgccgcgcgg tatcagaagg aaggcgccac tcacaaacag cgcggcattg agagctgtaa
     4501 acccgttgtc gtggccaccc tcgaaatggg aactcaacag tgactcgtac tcaggtcggg
     4561 ctaacgcttc ggccaggttc acgaccacga cgccggccgg caggtttgaa actgaagaac
     4621 tctcgcgttg aaagattccg tttacgaaaa cgaggcgact gtcgcgcgcc tcttcgaaag
     4681 tgaacttgct cagttcgccg ttcagcttcg tcgcagatcc aaacgaggga gtgaaagcag
     4741 tgcgggcaat cagcgccgtg tttgtgtatt tccaatcctc ttcgcggacg gttgggaagc
     4801 cgacccggtc gaactctgcg aatgcgtctt cgcgagcgcg gcgcaaccag gccggctcgc
     4861 cggattgctg gctaagcaac tcgcggaacg ccgcgtcgta aacgtttgtg tgtgcgattt
     4921 cagaaaccat cttatcttgc ggcgggcgcg ctaacggcgg gtttaccatt gctgctcttc
     4981 agccagtcgt agcccttctc ttccaattcg agcgccaatt ccttgccgcc ttctttcacg
     5041 atgcgaccgc ccgacaggac gtgcacaaaa tccggaatga tgtagttcag caaacgctga
     5101 tagtgcgtca cgagaatgac ggc
//
LOCUS       DATDBY010000603         5109 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1923542, whole genome shotgun sequence.
ACCESSION   DATDBY010000603 DATDBY010000000
VERSION     DATDBY010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5109
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1923542"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(137..850)
                     /locus_tag="VIT19_11295"
     CDS             complement(137..850)
                     /locus_tag="VIT19_11295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839612.1"
                     /translation="MDAGGGSEAAKGKELSAKRKNFAPLELTHHFYNSTGPAVIMRGK
                     KILVIIIALALLLACIVALRLQRDKPVGPRVSETSRLSGAPAFEVQVEMPAFNSGRAP
                     WEIPGVIMGYDRGPRFDQASPGAQVGKIAPDHIELSAGGGWDLLIETDGEGRLAQGTH
                     VAFPVKLGSRPLKFNCQPADPTVGYLHITSGPGSVQLEGSFQLEVAICKNAVSGKTAA
                     WPYQPLRVRGTFAGLKKQR"
     gene            complement(872..1276)
                     /locus_tag="VIT19_11300"
     CDS             complement(872..1276)
                     /locus_tag="VIT19_11300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839613.1"
                     /translation="MDVKYLNTDLEIESKSDLSEIVKEFGEDVFLHHNGEIRGYQHAS
                     FSIAGGSTGADATIDFFCTLVEQFPKDIREIWDGCCSRLFDIGYESGTSPQNFRSEIR
                     AATIQRVAKIGASVVVTIYPETKESASGNATS"
     gene            complement(1413..1886)
                     /locus_tag="VIT19_11305"
     CDS             complement(1413..1886)
                     /locus_tag="VIT19_11305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839614.1"
                     /translation="MKTFALSTLLLAGLLAPPQRAIKLEIGAKLDRQYIPKKIAEEIV
                     TSSAQTRPFIKQSVGGVEYIIAFDAKTREIKYLHTTDENFRSKNGLRVGSEIALTRQQ
                     LIVIPSWEIRAPITSDGWYPVVGWDIVPLDFDLVGSFKGNETRMVSIDGFSKGGN"
     gene            complement(1979..2158)
                     /locus_tag="VIT19_11310"
                     /pseudo
     CDS             complement(1979..2158)
                     /locus_tag="VIT19_11310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012077405.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            complement(2184..3410)
                     /locus_tag="VIT19_11315"
     CDS             complement(2184..3410)
                     /locus_tag="VIT19_11315"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5839615.1"
                     /translation="MTRWPVLVLAAIAAALLLGAVVFAVPLWVTVAGLTLVIAALIGL
                     ATRGDSHSHHLRRESGESAADLAPKLLDVALDEMREGLLVIDTDMRVVASNKAARDVL
                     SETGPIEARRLTELTRNPAIYDAFLDALKGQQRDGVKVETYDSGRRVFDLRVVPFHAN
                     GSIAGAVGVLFDVTRLDRLEIVRQEFLANVSHELRTPLTSILASAETLESGAVENAEN
                     SRRFLSIIQKNAIRMERLIHDLLELGAIEGGSVSVNPETVQLKSLVDDVMSTLAMAAA
                     ERGVSLRNLVPTNVQVTADPHRLVQMLTNLIDNAIKFNREGGTVTIEHGRNGSDRISV
                     TDTGEGISTQHLDRLFERFYRVDRARSRDLGGTGLGLAIVKHLAKAHDGEVSVTSNIG
                     EGTQFTIELPRSAVTP"
     gene            complement(3415..4125)
                     /locus_tag="VIT19_11320"
     CDS             complement(3415..4125)
                     /locus_tag="VIT19_11320"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5839616.1"
                     /translation="MSKRALIIEDDPDIAETVRYNLASEGFATRIAATGEEGLSLALD
                     PHSSPSVIILDLMLPGMNGMDLCRRLRREDQTRRTPIIMLTAKASETDRIAGLDLGAD
                     DYIAKPFSVRELLARVRAVLRRADEGPAEIYDDGRLMIDFDDVRALCDQVVIKLTNKE
                     FSLLCALAKKRGRVVTRQQLLDQVWGYSYYGDARTLDVHIRRLRQKLGGCGDCIETVV
                     GVGYRFVGCAQNSPTPPG"
     gene            complement(4130..4807)
                     /gene="phoU"
                     /locus_tag="VIT19_11325"
     CDS             complement(4130..4807)
                     /gene="phoU"
                     /locus_tag="VIT19_11325"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEY5839617.1"
                     /translation="MKVHRHLDEELERLRDTVLRLGGESEAALRRAMHSLTERDPAAA
                     REVLEHDDVVDELEVEVDRQCIDIFVLRQPAARDLRFVMSVTKIAPLLERIADHACNI
                     ARTAIDLADEPEVKNAQRIARMGEIASSMLAEALDAFTKSDATAARKIILRDAEINNL
                     YNEIFSELIGMMVTSPNTATSSARLLLVAKHLERIGDYVTDISELTVYMAEAAIIKHQ
                     RDKLETA"
     gene            complement(4809..>5109)
                     /gene="pstB"
                     /locus_tag="VIT19_11330"
     CDS             complement(4809..>5109)
                     /gene="pstB"
                     /locus_tag="VIT19_11330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979518.1"
                     /note="ATP-binding protein; PstABCS is an ATP dependent
                     phosphate uptake system which is responsible for inorganic
                     phosphate uptake during phosphate starvation; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEY5839618.1"
                     /translation="QQRLCIARALAIRPEVILMDEPASALDPIATSKIEELIFVLKKQ
                     YTIAIVTHNMQQAARVSDFTAFFLLGKLIELNTTEKMFTAPDEKTTEDYITGRFG"
BASE COUNT         1098 a         1443 c         1390 g         1178 t
ORIGIN      
        1 ctcataggtc aaaaacggaa ccacgtctgg catcttgttc tcctttcgcc atgccacgaa
       61 ggtttcgaac accaaatacg caggatggca ctaccgagcc cgccgtgccc aaagcggcgt
      121 ccagccgcga agttcgtcat ctttgctttt tcaaccctgc aaaggtccca cgaactctga
      181 gcggttggta gggccacgcg gcagtttttc ctgagacagc attcttgcag atagcgactt
      241 ccagttggaa gctcccttca agttgcaccg agcccgggcc cgaggtgatg tgaagatagc
      301 caacggtcgg gtctgccggt tgacagttga atttcaacgg cctgctcccg agttttaccg
      361 ggaatgctac gtgtgttcct tgggcgagcc ttccttcgcc gtcggtctcg atcaagaggt
      421 cccatccgcc gccggcgcta agctcgatat gatccggcgc tattttgccg acctgggcgc
      481 caggacttgc ctgatcgaac cgcggcccac gatcgtaacc catgatgacg ccagggatct
      541 cccaaggtgc gcggccggaa ttgaaggcag gcatctcgac ctgaacctcg aaggccgggg
      601 ctccgcttaa tcgcgatgtt tccgacacac gcgggccaac cggcttgtcc ctttgcagtc
      661 tcagcgcgac gatacaggca agcagcaacg ccagtgcgat gatgatcacc aatattttct
      721 tgccacgcat tattaccgca ggcccagtgc tgttgtagaa atgatgcgtg agctcgagcg
      781 gcgcgaagtt ctttctcttt gcgcttagct ctttgccctt agccgcctcg ctcccgccgc
      841 ccgcgtccaa cgatttgttc ggcagccctc cttaggacgt cgcgtttccg gaggcagatt
      901 ccttggtttc tggatagatc gttactacta cgctggctcc gatttttgcg actcgttgaa
      961 ttgttgcggc acgaatttcg gaccggaagt tttgtggtga tgtaccactc tcgtagccaa
     1021 tatcgaagag ccgcgaacaa catccatccc aaatttcacg aatgtctttg gggaattgtt
     1081 ctacaagcgt gcagaagaaa tctatcgtcg cgtcagcgcc cgtactacca cccgcaattg
     1141 aaaaagatgc gtgttgatag cctctgattt cgccattgtg atgaaggaag acgtcctcgc
     1201 caaattcctt cacgatttcg gagagatcgc ttttcgattc gatttccaaa tcggtattta
     1261 ggtatttgac atccatacaa ctagctgccg aacgtggagt tgaccgggtt gccgccggtt
     1321 acacgagacc atcgtagaac cgaacgagtt tgatgagaag ctcgcaggcg gcaactccgg
     1381 tccaacgatt tgttcgattg tgtcgtcgaa tgttaattgc cacctttcga aaagccatcg
     1441 attgaaacca tccgagtctc gttgcccttg aagcttccaa ccaggtcaaa gtccaaaggc
     1501 acaatgtccc atccgacaac aggataccaa ccgtcggacg taattggcgc gcgtatttcc
     1561 caggacggaa tcacaataag ttgctggcgc gtcaaagcaa tttcactacc aacgcgtagc
     1621 ccatttttgc tgcggaagtt ctcgtccgtg gtgtgaaggt attttatttc gcgcgttttc
     1681 gcatcgaacg caattatgta ttccactccg ccgacggact gcttgataaa cggtctagtt
     1741 tgagcagaag aggtgacgat ttcctcagcg atctttttgg gaatgtattg gcgatcaagt
     1801 ttcgcaccga tctccagttt gatggctctt tgaggcggag ccaagaggcc agctaaaagc
     1861 agcgttgaga gtgcgaacgt cttcatggaa aaagcatcga actagtatta gacggaacga
     1921 ttccgtgtaa gcctcttata gcgcgtctta tcggtaccgc caagctttgc tgccagtatc
     1981 aatagtccat cggactcgta aggcttttcc ctccccgatt caccacgtga gagtaaatca
     2041 tggtagtccg aacgtccttg tgtcccagta catcctgaac tgtccggatg tcgtaaccgc
     2101 tctcaaggag gtgcgtggca aaactgtggc ggaaggtgtg acaactggca ttttccgact
     2161 gcgcgctgga gcttacacgg ccgctaggga gtcacggctg accgcggcag ttcaatggta
     2221 aattgtgttc cttcaccaat gtttgaagtg acgctgactt caccgtcatg tgcttttgcc
     2281 agatgcttca cgattgccag gccgagtccg gtgccgccta agtctcttga acgcgcacga
     2341 tcaacgcgat agaaacgttc gaataaacga tccaggtgtt gcgtcgagat tccttcgccc
     2401 gtatccgtga cggaaattcg atcactgcca tttcgcccgt gctcgatggt aacggtgccg
     2461 ccttcacgat tgaatttgat tgcgttatcg atgaggttag taagcatctg caccaggcga
     2521 tgaggatcgg cagtgacctg tacgttcgtc gggacgagat ttcgaagcga gacaccgcgc
     2581 tcggccgcgg ccatcgcaag cgtgctcatc acgtcatcga ccagtgattt gagttgcact
     2641 gtctctgggt taacgctgac gctgccaccc tcgatcgcgc ctagttccaa cagatcgtga
     2701 atcaaccgct ccattcggat tgcgttcttt tgaatgatcg agagaaagcg ccggctgttc
     2761 tcggcatttt ccacggcgcc ggattcaaga gtctctgccg aagccagaat cgaagtgagt
     2821 ggcgtgcgca gttcgtgcga gacgttggca agaaattcct gacgcacaat ttccagacga
     2881 tccagccgcg tgacatcgaa aagaacaccg accgcgccgg cgatgctgcc gttggcgtga
     2941 aaaggaacga cgcgcagatc gaacacccgg cgtccgctgt cataagtttc gactttgact
     3001 ccgtcgcgct gctgaccttt gagcgcatcg aggaaggcat catagattgc cgggttgcgc
     3061 gttagttccg tgagccgccg cgcttcaatt ggccccgtct cagagagtac gtcgcgcgcc
     3121 gctttgtttg aagctaccac gcgcatgtcc gtgtcgatta ccaacaggcc ttcgcgcatt
     3181 tcgtccagcg cgacatccag cagcttgggc gcgaggtccg cggcgctttc acccgattca
     3241 cgtcttaagt gatgtgagtg cgaatcgccc ctcgtcgcga gcccgattaa agcggcgatg
     3301 accagagtga ggccggcaac cgtgacccag agaggcacgg cgaaaaccac cgcgccgagc
     3361 agcaacgccg cggcaatggc tgccaaaaca agaaccggcc atcgcgtcat cgaattatcc
     3421 gggtggcgtg ggcgagttct gggcacaacc gacaaatcgg tagccgacgc cgacgactgt
     3481 ctcgatgcag tcaccacagc caccgagttt ttgtctgagt cgtctaatgt gcacatccag
     3541 agtgcgggcg tcgccgtagt agctgtaacc ccaaacctga tcgagcagtt gctgccgggt
     3601 aactacgcgg ccgcgcttct ttgccagggc gcatagtaac gagaactctt tgttggtgag
     3661 tttgattacg acctgatcgc acaatgcgcg cacgtcgtca aaatcgatca tcagccgtcc
     3721 atcatcgtaa atttcggccg ggccttcgtc cgcacgtctc agcaccgcac ggacgcgcgc
     3781 caaaagctcg cgcacggaaa acggcttggc gatgtagtca tcagccccga gatcgaggcc
     3841 ggcgatgcga tcagtctcag acgctttcgc cgtcagcatg atgatcggcg tacgacgcgt
     3901 ctgatcttca cggcgcagac gacggcacaa atccatgccg ttcattccgg ggagcattag
     3961 atcgagaatg atcacggagg gagagctgtg cgggtcaagg gcgagtgaaa ggccttcttc
     4021 tccggtggca gctatccgag tagcaaaacc ttcagacgca aggttgtaac gaacagtctc
     4081 ggcgatgtcc gggtcgtcct caataattag agcccgtttt gacatgagtt caagcagttt
     4141 ccagcttgtc gcgttggtgt ttgatgatgg cagcttcggc catgtacacg gtcaactcgc
     4201 tgatgtcagt gacgtaatcg ccgattcgtt ccaggtgctt cgccaccagc agcaatcgcg
     4261 cgctgctcgt ggcggtgttg ggcgaggtaa ccatcatccc gatgagttcg ctaaaaatct
     4321 cgttatagag attgttgatc tcggcatctc gcagaatgat tttacgggcc gcggtagcat
     4381 cggatttcgt aaacgcgtcg agggcttcgg ccagcattga tgaggcaatc tcgcccatcc
     4441 gcgcgatacg ctgagcgttc ttaacttccg gctcatcggc taaatcgatt gccgtgcgag
     4501 caatattaca agcgtggtcg gcgatgcgct cgagcaacgg cgcgatcttc gtcaccgaca
     4561 tcacgaacct gagatcgcgc gcggcgggct gacgcaggac aaaaatatcg atgcactgcc
     4621 gatcgacttc gacttccagc tcatcgacga catcgtcgtg ctccagcact tcgcgcgccg
     4681 cggccgggtc ccgttcggtg agcgagtgca tcgcgcgccg cagagcggcc tcagactcgc
     4741 cgccaagccg caacaccgtg tcgcgcagtc tttccagttc ctcgtcgaga tgtctgtgaa
     4801 ctttcatctt aaccaaagcg tccggtgatg taatcctcag tcgttttttc atccggggcg
     4861 gtaaacatct tttccgtcgt gttcaactcg atcaacttgc cgagcaggaa gaaggcggtg
     4921 aaatccgaca cgcgggccgc ctgctgcatg ttgtgcgtca cgatggcgat tgtgtattgc
     4981 ttcttcaaaa cgaaaatcaa ctcttcgatc tttgaagtgg cgatcggatc gagggctgag
     5041 gccggttcgt ccatcaggat gacttccggc cgaatcgcca acgcccgcgc gatacaaagc
     5101 cgctgctgc
//
LOCUS       DATDBY010000604         8270 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1868954, whole genome shotgun sequence.
ACCESSION   DATDBY010000604 DATDBY010000000
VERSION     DATDBY010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 8270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8270
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1868954"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            513..2504
                     /locus_tag="VIT19_11335"
     CDS             513..2504
                     /locus_tag="VIT19_11335"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEY5839619.1"
                     /translation="MKLIDMSDYNGAARPYWYVIAVTGISVFVWVLQGGIKYAVLSVP
                     VLAVTFWTYKLYFERLNAKTREAEEMSRLHLATAEALATAIDAKDQTSHCHVRRVEIY
                     IDGLGRLLGLSQKELAALRAGALLHDIGKLAVPDHILNKPGSLTPAEFEKTKIHTTVG
                     AEILSRVNFPYPVIPIVKHHHERWDGCGYPDGLKGEQIPITARIMSVVDSFDSVREDR
                     PFRPSMSREDAIDLLRKGAGTHFDPKIVELFIGELPRFEAEISSRGLDAEIHSSNPPM
                     PIAPAEDEVTSARENTSFAAYDEIRNAHREVYALYEIARKFSSSLEMDSTLSVLVEKV
                     GHLVTFDTCAVYLYDEIKGYASAALVVGRDAEALRNRCVAPGEGVTGFAMANRRSVNR
                     LQPSLEFDRLGVKLEARYRSMASLPLFKGDVLVGALSLYSTSLRQYTDNQIRLLETVT
                     RLASDALTNAMHHAQTESNALTDSLTGLPNGRALHVRFDQEVSRARRNNRPFQVIMLD
                     LDDFKIVNDSFGHKIGDRMLREVASLIQNQLREYDFLARYAGDEFVALLPDLTVQQVD
                     ELRGRIETVVSSFSLGVGAGSQTRARVGISIGASIFGTDGETLDHLLIAADQAMYRAK
                     SAHKTGALPLLNLPEGLENTSIAPSGEADTENLVTALIN"
     gene            2693..4735
                     /locus_tag="VIT19_11340"
     CDS             2693..4735
                     /locus_tag="VIT19_11340"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5839620.1"
                     /translation="MPVSPTSETYPATLLLIDDDSSAREGLRSIFESAGHRTVAVSDA
                     PSALRFLKKEQCDLVMLDVELPEVDGLALCRLLRAQPSLRQLPVLVFSATDNEQRKVE
                     AFSAGADDYIVKPSTPGELISRVNSHLSGAQRESQLTDANHELRFLADLGRGLLKTLE
                     PDQVARRVAGATFEGINAALCACVVKNNGHGFAICAFDREGNAEGASLVHRERFAGWL
                     DSKRAATPSLLTNEREFLLHDDRRTTEYISPMLFGGEVLGALIVAFDSPKDYSITDCG
                     LIDAAAQQAALAAHISLLYLHARESAATLAEEVDRRAVEAEVQQRFTEAIIDSLPLSL
                     YAIDRDKRIVAWNRNRELGELGVPRGQVLGKEIFDVLTRQSRELLEREFTKVFATGEI
                     HRVEQETITQSGDANHWLISKIPMHADETGEVSHVITVGENITSRVKSERAVARAEKL
                     AAVGRLAAGVVHEINNPLATIAACAESLEKRIAEGAFAESSEIEDLKEYLGLIRDEAF
                     RCKQITHGLLDFSRLRAGNRVPVNLVETIKMTARLVTHQQRGDNNIQIEIETMKNLPV
                     ILGDEGQLQQAVVALATNAIDAMPVGGTLTLRAAHSGPNVSIEITDTGVGISPENLTK
                     IFDPFFTTKDVGRGTGLGLAVCYGIVSEHGGRLDVRSTVGVGTTFTISLPKASMSD"
     gene            4775..6175
                     /locus_tag="VIT19_11345"
     CDS             4775..6175
                     /locus_tag="VIT19_11345"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY5839621.1"
                     /translation="MDEQRNARLLIAEDEANLRLVLQKELQRLGYRVHVAPDGEAALR
                     KLEESNVDVLLCDINMPRMDGMELLRRVHERPNPPEVIMLTGQGTIETAVEAMRAGAY
                     DYLTKPYSISELDVRVRQAAEKRNLRVDNQRLRAQIERKTAIPEIIGESRAIAEAIRL
                     VERVAPSEASVLITGESGTGKELIAQAIHRLSSRANGAFIDLNCAAFQESLLESELFG
                     YEAGAFSGAKARKLGLIELADGGTLFLDEVTELPANLQAKLLRAIETRTFFRVGGVRK
                     VEVNVRIVAATNRNLDSVVNDGTFRADLLYRINSFQIHLAPLRDRTEDIPPLTEHILK
                     QLAGASAPMVEPEVVEKLRDYGWPGNVRQLRNCLERAVLLADDGRISVSELPPEVAGR
                     TMGLASYAAPPAAGSANGSDLSTPTALRDVEKQQIINALEQTGWHRGKTAALLGISPS
                     TLYRRLRDYHLEGKLR"
     gene            complement(6303..7010)
                     /locus_tag="VIT19_11350"
     CDS             complement(6303..7010)
                     /locus_tag="VIT19_11350"
                     /inference="COORDINATES: protein motif:HMM:TIGR02595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HEY5839622.1"
                     /translation="MRNLLLLIAAAFVFALPVTASADVITFQAPVTAPNAGNGGPRQV
                     DLDHHRAYTWRIDGVNLGGQTLTGATLTFRNISNWDTNPNMLFMHLLDTARNAGIASF
                     TDASGVPVPSSQIRDNFAGSLLGSNPLVAPGTGNILLTQQSFTTTPRDFVYTFTADQL
                     NILSVFILNGGNMALGLDPDCHFWNNGITLTLTTCPPTATPEPATMALLGSGLAGLYY
                     RRRQQKRKAAAAAASQV"
     gene            complement(7304..>8270)
                     /locus_tag="VIT19_11355"
     CDS             complement(7304..>8270)
                     /locus_tag="VIT19_11355"
                     /inference="COORDINATES: protein motif:HMM:TIGR02262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HEY5839623.1"
                     /translation="NTEVFAKRTMGVNENDLTVSVPKLFFGYATGTNLLFPFAVGGAT
                     ALFAERSTPEKLFEVIEQYRPTILTTVPTMINGMLNAADAPSHDVSSIRFCYSAGEAL
                     PVELYHRWKQTFGVEICDGIGSAEMFHIYITNQPKDVKPGSLGRVVEGYEAKIVDADS
                     NEVPIGEMGTLKIKGDSASLCYWNAHEKSKETFAGDWCTTGDQFHLDAAGYYWYHGRT
                     DDMLKVGGIFVAPAEIENCLLQHDAVLECAVVGHDDGDGLVKPKAFVVARDGHAASEQ
                     LVDDIKQFAKTRLALYKYPRWVEFVPSLPKNDRGKIDRKLLKITT"
BASE COUNT         1760 a         2318 c         2410 g         1782 t
ORIGIN      
        1 tttcgaagct tcatccgctt tttggaagat gatgaaaggt gcactcgcct aatgaagttg
       61 tcaacgcgcg tcccgtcagt ctgactggtc agaatgagaa acgtgaccgc atctgctcga
      121 tgaaccatct cggtgtcatc acaaatccgc cgaaataggc cagctttgcc gaaagacact
      181 tgcggcacgc gcgttgtaat cgtgagaggc gcggctagga aagcttaacc gctgtagggc
      241 ccaccgcact gggtccgcta gccgcgaaaa attatgatcc gaagcgcgcg actcttttgc
      301 cctgttactg caccccagac ggcgcatgcg tgccagcatc gccgacttgc ccagtgccgc
      361 gccgaaactg aaatgccgag ttgctcccgg ttaaaggttt cggcgcggac ttctttagga
      421 atcgcaggga ggacttcagc tataccgcac gttgagtatt tgaaagctcg ctaatcccga
      481 cgagtcggat tctgacccga ctgagcagca acatgaaact gatcgatatg tctgattaca
      541 acggcgcggc gcggccctat tggtacgtta tcgccgtcac cggtatttcg gtgttcgtct
      601 gggttctcca gggcggcatc aaatacgccg tgctgagtgt gcctgtactc gccgttacct
      661 tctggactta taaactgtat ttcgagcgcc tcaacgcaaa gacacgcgaa gctgaagaga
      721 tgagccgtct gcatttggcg acagccgagg ccctggccac cgcgatagac gccaaggatc
      781 agacttcgca ttgtcacgtg cgacgcgtgg aaatctacat cgatggcctg ggccggttgc
      841 tcggtttgtc tcagaaggaa cttgcagcct tacgcgccgg ggcgttgctg catgacattg
      901 gcaaacttgc cgtgcccgat cacatcctga acaagccggg atcgctgacg cctgccgaat
      961 tcgagaagac aaaaattcac accaccgtcg gcgccgaaat tctcagccgc gttaattttc
     1021 cgtatccggt aatccccatc gtaaaacacc atcacgagcg ttgggatggc tgcggttatc
     1081 cggatggttt gaaaggcgaa caaatcccga tcaccgcgcg catcatgtcg gtggttgata
     1141 gctttgattc ggtgcgcgaa gaccggccgt tccggccaag catgtcgcgt gaagatgcga
     1201 tcgacctgct gcgcaaaggc gccggcacac atttcgatcc gaaaatcgtt gagttattca
     1261 tcggtgaatt gccgcggttt gaggctgaga tttccagtcg cggcctcgac gcggagattc
     1321 attcaagcaa tcccccgatg ccaattgcac cggctgaaga cgaagttaca agtgcacgtg
     1381 agaacacttc cttcgcggcg tacgatgaaa tccgcaacgc acatcgtgag gtgtacgcgc
     1441 tttacgaaat cgcgcgcaag ttcagttcgt cgctggagat ggatagcact ttgtcagtgc
     1501 tggtcgaaaa ggtggggcat ctggtgacct tcgatacatg cgcggtttac ctgtacgacg
     1561 aaatcaaggg ttacgcgtcg gccgcactcg tggtcggccg cgacgccgaa gctctgcgca
     1621 atcggtgtgt cgcgccgggc gagggggtca ccggttttgc gatggcgaat cggcgttcag
     1681 tgaatcgact tcaaccaagt ctcgaattcg atcgacttgg ggtgaaactc gaggcgcgct
     1741 accgttcgat ggcttcgctg ccactgttca agggcgatgt cctggtcggc gcgttgtcgc
     1801 tgtattcaac gtcgcttcgt caatacaccg acaatcagat tcgtttgctc gagactgtca
     1861 cgcgtttggc gtcagacgcg cttacgaacg ccatgcatca cgcgcaaaca gaatcaaacg
     1921 cgctcacaga ttcgttgacc gggctcccaa atgggcgggc tctgcacgtg cgattcgacc
     1981 aggaggtctc gcgcgcgcgt cgtaacaatc gtccgttcca ggtcatcatg ctggaccttg
     2041 acgactttaa gatcgttaac gacagctttg gtcacaagat cggcgaccga atgctgcgcg
     2101 aagttgccag cctgattcag aaccaactcc gcgaatacga ctttctcgct cgctatgcag
     2161 gggacgagtt tgttgccttg ctgccggact tgacggtgca gcaggtggac gaactgaggg
     2221 gccgtattga aacggtcgtc agctcgttct cgctgggtgt gggggcgggc tcgcaaaccc
     2281 gggcccgggt gggcatctca atcggcgcgt cgattttcgg cactgacggc gagaccctgg
     2341 atcatctcct aattgcggcc gatcaggcca tgtatcgcgc gaaatcggca cacaagaccg
     2401 gtgcgctgcc cttactaaac ctaccggaag gcctggagaa cacgtccatc gcgccgtcgg
     2461 gggaagccga caccgagaat ctcgtaaccg ctttaattaa ttaatattct tgacaactcc
     2521 agccttgatc ttccaatgtg gaaacaggct gcggacacgt ttgtccgctc cgggcgctgt
     2581 taaccacaaa cgcgctcatc cgaatatccg accaattctt tccggcccgc cccgcccatc
     2641 ctctggaaat cgcgtgttgc accaaactgt tcgaccctca cttttgacct tgatgcctgt
     2701 ttctcctacg tccgagacat atcctgcgac cctgctcttg atcgacgatg attcgtcggc
     2761 acgcgagggg ctgcgcagta tttttgagag cgccggccat cgcaccgttg ctgtcagcga
     2821 cgcgccatcg gctctgcgat ttttgaagaa agagcagtgc gacctggtga tgctcgatgt
     2881 cgagctgccg gaagttgacg gtctcgctct ctgtcgtttg ctgcgcgcgc aaccgtcgct
     2941 gcggcaattg ccggtgctgg tgttttcggc gaccgacaac gagcagcgca aggttgaagc
     3001 tttcagcgcc ggcgccgacg actacatcgt caagccttca acacccggcg aactgatctc
     3061 ccgggtcaat tcgcacttga gtggcgcgca acgcgagtcg caactgactg atgcgaatca
     3121 tgaattgcgt ttcctcgccg acctgggccg cggtctactg aaaactctcg aacctgatca
     3181 ggttgcgcgc cgagttgcgg gcgcgacgtt cgaaggcatc aacgctgcgt tgtgtgcctg
     3241 cgtggtgaag aacaacggac acgggttcgc catctgcgcc tttgaccgcg aaggcaacgc
     3301 cgaaggtgcg tcactggttc atcgcgaacg ctttgccggc tggttggatt ccaagcgcgc
     3361 agccacaccg tcgctgctga ctaatgaaag agaattcctt ctgcacgacg atcggcggac
     3421 gaccgagtac atcagcccga tgctgtttgg tggagaggtc ctgggcgctc tcatcgtcgc
     3481 gttcgacagt ccgaaagact attcaatcac tgactgtggc ctgatcgatg ccgccgcaca
     3541 gcaggcggcc ctcgccgcgc acatttcgct gttgtatctg cacgcgcgcg aatcggccgc
     3601 gacgcttgct gaagaagtcg atcgccgcgc cgtcgaggcg gaagtgcagc agcgcttcac
     3661 cgaagccatc atcgatagcc tgccgctctc gctttacgcc attgatcgtg acaagcgcat
     3721 tgtggcctgg aaccgcaatc gcgaattggg cgaactgggc gtgccgcgcg gacaagtgct
     3781 tggcaaagag atcttcgacg tgctgacaag acagagtagg gaattgctcg aacgcgagtt
     3841 caccaaggtg ttcgcgaccg gtgaaattca ccgcgtcgag caggaaacta ttacccaatc
     3901 cggtgacgct aaccactggt taatcagcaa aataccaatg cacgccgacg aaaccggcga
     3961 ggtgtcgcac gtcatcacgg tcggtgagaa cattacctcc cgagtgaaat ctgaacgcgc
     4021 cgtcgcgcgc gctgagaagc tcgccgcggt tggtcgcctg gccgccggcg tcgtccatga
     4081 aatcaacaat ccactggcga cgatcgccgc gtgcgctgag tcgctcgaaa aacgaatcgc
     4141 ggagggcgcg ttcgctgagt cttcggagat tgaagacctg aaagaatatc tcggcctgat
     4201 tcgcgatgaa gcttttcgct gcaaacagat cacgcatggt ttgctcgact tcagtcgtct
     4261 gcgcgccggc aatcgcgtgc ccgtgaatct tgtcgaaacg atcaagatga cggcgcggct
     4321 cgtcacccat caacagcgcg gcgacaacaa cattcagatc gaaatcgaaa ccatgaaaaa
     4381 cctgcccgtg attctgggtg acgaaggtca gttgcaacag gccgttgtcg cgctcgcgac
     4441 caacgcgatt gatgcaatgc cagtgggtgg cacgctcacg ctgcgcgctg ctcattcggg
     4501 accgaacgtc agtattgaaa tcaccgacac tggcgttggc atttccccgg agaacctcac
     4561 gaaaattttt gatccgttct tcacgacgaa ggacgtgggc cgcggcaccg gcctcgggct
     4621 ggcggtctgt tatggtattg tatccgaaca cggtggccgc ctcgacgtaa ggtcaaccgt
     4681 gggtgtcgga actactttca ccatctcgct acccaaagcg agcatgtcgg actaacggcg
     4741 ccagccgtcg attcagtgcg ggagtcgaag agcagtggac gaacaacgca acgcaagatt
     4801 actgatcgcc gaagacgagg caaacctgcg tctggtgttg cagaaagaac tgcaacggct
     4861 cgggtatcgt gtgcacgttg cgcccgatgg cgaagcggcc ttgcgaaaac tcgaagagag
     4921 caacgtcgat gtgctgctgt gcgacatcaa catgccgcgc atggatggca tggaattgct
     4981 gcgccgcgtt cacgaacggc ccaatccgcc cgaagtcatc atgctcacgg gccaggggac
     5041 gatcgaaacg gcggtcgagg cgatgcgggc cggcgcatat gattacctga ctaagcctta
     5101 cagcatcagc gaactcgatg tgcgcgtgcg ccaggcggct gagaagcgga acctgcgggt
     5161 cgataaccaa agactgcggg cgcaaattga gcgcaagacc gccattccgg aaatcattgg
     5221 cgaatcgaga gcgattgctg aagcgattcg cctggtcgaa cgggtcgcgc cgtctgaggc
     5281 atcagtgttg attaccggcg agtccggcac gggtaaggaa ttgatcgcgc aggcgattca
     5341 ccgcctctcg agccgagcga atggtgcatt cattgattta aactgtgccg cgtttcaaga
     5401 gtcgctgctg gaatctgaat tgttcggcta cgaagcgggc gcattctcgg gcgcgaaagc
     5461 tcgcaagctc ggcctgattg aactggctga cggcggcact ctgttccttg atgaagtgac
     5521 tgagctgccg gcgaatttgc aggcaaagct tctccgtgca attgaaacgc gcacgttctt
     5581 ccgtgtcggc ggcgtgcgca aagtcgaagt caacgtgcgc atcgtggccg cgacgaaccg
     5641 caatttggat tcggtggtga acgatggaac gtttcgcgcc gacctgctct atcgcatcaa
     5701 cagttttcag attcacctgg cgccgttgcg tgatcgcacg gaagatattc cgccgctcac
     5761 cgaacatatc ttgaaacagc ttgcgggagc gagcgcgcct atggtcgaac cggaggtcgt
     5821 ggaaaagctg cgcgactatg gttggccggg gaacgttcgc cagctgcgaa attgtttgga
     5881 gcgcgccgtg ttgctcgctg acgatggccg cattagcgtg agtgaattgc cgccggaagt
     5941 cgccgggcgc acgatgggcc tggcgtcgta tgctgcccca ccagccgcgg gctcagccaa
     6001 tgggagtgac ctttcaacgc cgacggcttt gcgcgacgtc gagaagcagc aaatcatcaa
     6061 tgctctggaa cagaccggct ggcaccgagg caagacggcc gctttgctcg gtatctcgcc
     6121 ttcaactctg tatcggcgcc tgcgcgatta tcatttggaa ggaaaactgc gctgagtaat
     6181 gagtaatgag taatgagtcg gctctgtttt acgcatcact catcacgcat cactcaaaaa
     6241 gattaagccg cgaatcccga ctgttcggga tccgcggctt tcagttttca caaacgatct
     6301 cgtcagacct gactcgcggc agctgcagca gctttgcgtt tctgctgtcg tctccggtag
     6361 tacagtcccg ccaatccgct tcccaacaac gccatcgtgg ccggctcagg tgtggccgtc
     6421 ggtggacagg tggtcagcgt taaggtgatg ccgttgttcc agaagtggca gtcaggatcc
     6481 aaacccaacg ccatattgcc tccgttgagg atgaacacgc tcagaatgtt tagctggtcc
     6541 gcggtaaacg tgtagacaaa atcgcgcggc gtggttgtga acgactgctg cgtgagcaaa
     6601 atgtttcccg tacccggcgc caccagaggg ttgctgccga gcagtgaacc agcaaagtta
     6661 tctcgaatct gcgacgacgg cacgggcacg cccgatgcat ccgtgaatga agcgatgccg
     6721 gcgttgcggg cggtgtcgag caggtgcatg aacaacatgt tgggatttgt gtcccagttg
     6781 ctgatgttgc ggaaagtcag cgtcgcgcca gtaagcgtct ggccgcccag gttgactcca
     6841 tcgatgcgcc acgtgtaggc gcgatggtga tccaaatcga cctgccgcgg cccaccgtta
     6901 ccggcatttg gcgccgtaac cggggcttga aacgtgatga cgtccgcgga ggcggtgacg
     6961 ggtaacgcga aaacaaaggc ggcagcgatc agtagtaaaa ggtttcgcac aatcatcttc
     7021 cctttcgaag aaagtcctgg ttgacttgtc actggaagga aatggttagt aggtatgcaa
     7081 ttcctttaaa agtcttatgg atttcgaggg tttttcgttg ttaggaggcc tgacgtttac
     7141 tccctctccc tctgagagag gtccggggtg agggagcgaa gcttagcgat gggtaatcct
     7201 cagttcgtaa ggctgcgcct cacgaactgc aatagcctgg ggggagcggc cggtgaaaag
     7261 tcaccctaac cctctgccag aggaagagga cgcggctcaa gcttcaggtc gtgatcttta
     7321 acagcttgcg gtcaattttg ccccggtcat tcttcggaag cgaggggacg aattcgaccc
     7381 agcggggata cttgtacagc gcgaggcgcg tctttgcgaa ctgcttgatg tcgtctacta
     7441 gttgttcgct tgcagcgtgg ccgtcgcgtg cgacgacgaa ggcttttggt ttcactaatc
     7501 catccccatc gtcgtggccg acgacggcgc attcaagaac tgcgtcgtgt tgcaacagac
     7561 agttttcaat ctccgcaggg gcgacaaaga tgccgccgac tttgagcatg tcgtcggtgc
     7621 gtccgtgata ccagtaatag cctgccgcgt cgagatgaaa ttgatcaccg gtcgtgcacc
     7681 agtcgccggc aaaagtctct ttcgattttt catgcgcgtt ccagtaacac agcgaggctg
     7741 agtcgccttt gattttcagc gtgcccattt cgccaatcgg aacttcattg ctgtcagcat
     7801 cgacgatttt tgcttcgtag ccttcgacga cgcggccgag gctgccgggc ttcacatcct
     7861 tgggttgatt cgtgatgtag atatggaaca tctcggctga tccgatgcca tcgcaaatct
     7921 ctacgccgaa tgtctgcttc caacgatgat aaagctccac cggcagagcc tcgccggctg
     7981 agtagcagaa ccgtatgctc gacacgtcgt gcgacggggc atcggctgcg ttaagcattc
     8041 cattgatcat cgtcggcacc gtcgtcagaa tggtcggccg atattgttcg atcacttcga
     8101 acaacttttc cggcgtcgaa cgttccgcga ataaagcggt cgcgccgccg acggcgaacg
     8161 gaaacagaag gttcgttccc gtcgcgtatc cgaaaaagag tttcggcacg gatactgtca
     8221 gatcgttttc gttcacgccc atcgtgcgtt tcgcaaagac ttcagtgttg
//
LOCUS       DATDBY010000605         3896 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1286874, whole genome shotgun sequence.
ACCESSION   DATDBY010000605 DATDBY010000000
VERSION     DATDBY010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3896
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1286874"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..>3896)
                     /gene="smc"
                     /locus_tag="VIT19_11360"
     CDS             complement(63..>3896)
                     /gene="smc"
                     /locus_tag="VIT19_11360"
                     /inference="COORDINATES: protein motif:HMM:TIGR02168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEY5839624.1"
                     /translation="DHTDLRFTGEGITAVVGPNGCGKSNVADAIAWVLGEQRVKHLRG
                     GEMKDVIFQGSRNRQPSGMAEVVLHLQRDETTEDEPDIQDIDSTLEQIDSHDEIFEAP
                     ELSGSVAGVEATGSESVSVSGAVATGSSDQSENISGPSEPDEAKPRAKPHHRHWRQRR
                     NLALEFAPGEAVSVTRRLYRSGESEYLLNDRPCRLRDIQDLFSGTGLAGGHYAIIEQG
                     RIGQILSAKPMDRRTIIEEAAGITKFRVRQRAAEARLESARSNLSRVADIISEIERQV
                     NSLRRQAAKARRYRILREELRELLRRVYVGEEESLVALLEQTQAELDRAGQEEQQLAA
                     ALTEREDASRTATQNARTFEDELAQVRAAVAEGALQRDRRIRERVYQEEQIETLSKRR
                     TEIEAEVAALAERLTLVESELERLGALDATLTAETEQTSSLLRTAEETYAARLAEVAR
                     AEEEIENARPELLKHTVAGERLLELGRQIESSIEKLAQQAEGLAREGERATASHQTAT
                     TEAQKLGGQIIEARAKLARLVAERQGALKAVVEGHERVSDTDAELTRVRDDYSRTQAR
                     LESFKDLDERRAHFSLAVQEAFSANEAEQFHLIGTLADSIKVEAQWERAVEGALGSSL
                     QSVLVPTPDDAIRAAAWLKTNHIGRAQFLVTGLHGGSDEVTLATFAGAPTTSSTGAAP
                     QRDYVPMGIDGPRIGDILNAPRELLNLLERTLPERMNARVVPTLDDATALSLATGDMY
                     VTVDGDWVTGGQFVNAGNGRALEEGAGLLTFKRELRELQGRVVELEAERAVTEMSVRE
                     ARARMTGLEESVVLLNASIAREERGAMALELASGTLHQDVERAARHLRVVVDDQARLE
                     QERQDLEASRARALNDAEAAEAARVAVSQKITETTNHLAEIRAGVEIDSTTLNQQRAE
                     AAAAAERRRSTSSDLRRLQTEREEVSARIARHNLELTEGGSRIEQLRGSIAEIDRLAM
                     TIDEEKAREEGLIVEATARLTEARERADAMAAELAELNRNAAASRDARAAIEVQRAEA
                     LARVNFVRESCANELNQSLEEIARELVPDPEFVLETSRARVDELREKLESFGAVNMMA
                     LEELSENEERLAFLTTQRDDITKGIASTEEALREIKRRSRERFRGAFEQINQNFSELF
                     KELFGGGRGEMSLIDENDELESGIDIIAQPPGKRLQNVLLLSGGEKAMAALALVLGIF
                     HYRPSPFCLLDEVDAPLDEANIGRFTGKVVSMSANTQFIVITHNKRTMETARALYGVT
                     MQEVGVSKLVSVRFE"
BASE COUNT          659 a         1271 c         1111 g          855 t
ORIGIN      
        1 tgaccatcat gaatgtctga ttatgctggg agagaacagg tctttacaaa tcgggaccag
       61 gactattcga agcgcacgga aacaagcttg gaaacgccga cttcctgcat cgtcactccg
      121 taaagcgcgc gcgcggtttc catcgtgcgt ttgttgtggg taatgacgat gaactgcgta
      181 ttcgcggaca tagaaacgac tttcccggtg aagcgaccga tgttcgcctc gtcgagcggc
      241 gcatcaactt cgtccagcag gcagaacggc gacggccgat agtggaagat gccgagcacg
      301 agcgcgagcg ccgccatcgc tttctcgccg cccgagagca gcagaacgtt ctggagccgc
      361 ttgcccggcg gctgcgcgat gatatcgatg cctgattcga gttcgtcgtt ctcgtcgatc
      421 aggctcatct cgccgcgacc accgccaaac aattccttaa acagttcgct gaagttctga
      481 ttgatctgtt cgaacgcgcc gcggaaccgt tcacgcgagc gtcgcttgat ttcgcgcaag
      541 gcctcttcag tcgaagcaat tccttttgta atgtcatcac gctgcgtcgt caggaacgcc
      601 agccgctctt cgttttcgga aagctcttcg agcgccatca tgttgacggc gccgaagctc
      661 tcgagcttct cgcgcagctc gtcgacccgc gcgcgcgacg tctctaaaac aaattcagga
      721 tccggaacca actcgcgggc gatttcttcg agactttggt tcagctcatt cgcgcacgat
      781 tcgcggacga agttgacgcg cgccaacgct tcggcgcgct gcacttcaat cgccgcccgc
      841 gcatcgcgtg aggcagcggc gttgcgattc agttcggcta actcagccgc catcgcatcg
      901 gcgcgctcgc gcgcctcggt caagcgcgct gttgcctcga caatcagccc ttcctcacgc
      961 gccttctctt cgtcaatcgt catcgccagc cggtcgattt cggcaattga gccgcgtagc
     1021 tgttcgatcc gcgacccacc ttccgtcaat tccaggttgt gccgcgcgat tcgcgcactc
     1081 acttcttcac gctcagtttg cagccggcgc agatcagacg atgtcgagcg acggcgttcg
     1141 gcggcggcgg cggcttcggc gcgctgttgg ttcagcgtgg tgctgtctat ttccactcca
     1201 gcgcgaatct ccgccaaatg atttgttgtt tcggtgattt tttggctcac cgcgacccgc
     1261 gccgcctcgg cagcctcggc atcgttgagc gccctggcgc gactcgcttc caaatcctgt
     1321 cgctcctgct caagccgcgc ctgatcgtcg acgaccacac gcaaatgcct cgcggcgcgc
     1381 tcgacgtcct gatgcaaagt tccggaggcc agctctagcg ccatcgcccc gcgctcttcg
     1441 cgcgcaatcg aagcgttcag cagcacgact gactcttcca ggccggtcat ccgcgcacgc
     1501 gcttccctga ccgacatctc agtgactgcg cgttctgctt cgagctcaac cacgcggccc
     1561 tgcaattcgc gcagctcgcg tttgaaggtc aagaggccag cgccttcttc cagggcacgg
     1621 ccgttaccgg cgttgacgaa ctgcccgccc gtcacccagt caccgtcgac ggtcacgtac
     1681 atgtcgcccg tcgccagcga cagcgcggtc gcgtcatcca gcgttggcac tacgcgcgcg
     1741 ttcatccgtt caggcagcgt acgttcaagc agattaagta gctcgcgggg cgcatttaga
     1801 atgtcgccga tgcgcggccc gtcgattccc atcggcacgt agtcacgttg gggcgcagcg
     1861 ccggtcgagc tggttgtcgg cgcacccgca aaggttgcga gggtgacctc gtcactacct
     1921 ccgtgcaaac ccgtcaccag aaattgcgcg cgaccaatgt gattagtctt cagccacgcc
     1981 gcggcgcgga ttgcgtcatc gggcgtcggc accaaaactg attgcaggga cgaaccgagc
     2041 gccccttcaa cggcgcgctc ccactgggcc tcgactttga tcgagtcggc caacgtgccg
     2101 atcaagtgaa actgttcagc ttcgttagcc gaaaacgctt cctgcaccgc taatgaaaaa
     2161 tgagcccgac gctcgtcgag atccttaaag ctttcgaggc gcgcctgagt tcgcgaataa
     2221 tcgtcacgca cgcgcgtcag ctcagcgtca gtgtcggaca cgcgttcatg gccttcgacg
     2281 accgctttga gggcgccctg gcgttcggcg acgagccgcg ccaatttcgc acgcgcttca
     2341 atgatttgac cgccgagctt ctgtgcttcg gttgtcgccg tttggtgaga ggcagtcgcc
     2401 cgctcgcctt cgcgcgccag gccttccgcc tgctgcgcca gcttttcgat tgacgattcg
     2461 atctgtcgtc ccagttcgag cagccgttcg ccggcgaccg tgtgcttcaa tagttccggc
     2521 cgggcgttct caatttcctc ttcggcacgg gctacttcgg caagtctcgc ggcgtaagtt
     2581 tcttcagccg tgcgcagcaa cgacgaggtc tgctcggttt cggccgtcag cgtggcgtcg
     2641 agcgctccca accgctcgag ttcggattcg accagcgtta gccgttcggc caacgcggct
     2701 acttcggctt cgatttccgt ccggcgcttc gagagcgttt cgatctgttc ttcctgatag
     2761 acgcgttcac ggatgcgtcg atcacgctgc aacgcgcctt cggccaccgc cgcgcgcact
     2821 tgcgcgagtt cgtcttcgaa ggtgcgcgcg ttttgcgtcg ccgtgcggct cgcgtcttcg
     2881 cgttcggtta aggccgcggc cagttgctgt tcttcctgcc ccgcccgatc cagttcggcc
     2941 tgggtttgct ccagaagcgc cacgaggctt tcttcttcac cgacgtaaac gcgccgcaga
     3001 agctcgcgca gctcttcgcg cagaattcga tagcgacggg ccttcgccgc ttggcggcgc
     3061 aggctgttta cctggcgctc aatttccgaa atgatgtccg caacgcggct gagatttgaa
     3121 cgcgcgcttt ccagacgcgc ttcggcggcc cgttgccgca cgcgaaactt ggtgatgccg
     3181 gccgcctctt caataatcgt gcggcgatcc atcggtttgg ctgagaggat ttgaccgatg
     3241 cggccctgtt cgatgatcgc gtaatgaccg cccgccaggc ctgtgcccga gaacaaatcc
     3301 tgaatgtcgc gcagcctgca aggccgatcg ttaagcaggt attcgctttc acccgaccgg
     3361 tagagacgcc gcgttacgga aacagcttca cccggagcaa actccaaagc gaggtttcgg
     3421 cgttggcgcc agtggcggtg atggggcttg gctcttggtt tggcttcgtc tggttctgac
     3481 ggcccgctga tattctcgga ttgatctgat gaccccgtcg ctaccgctcc ggatactgac
     3541 acgctctctg atcccgtcgc ttctactccg gctactgacc cggacaattc gggagcttca
     3601 aaaatttcat catgcgaatc gatctgctcg agcgtcgaat cgatgtcctg gatgtcgggc
     3661 tcgtcttcgg tggtttcgtc acgctgcagg tgcaacacga cttccgccat gccgctcggc
     3721 tgccggttgc gcgagccctg aaagatgaca tctttcatct cgccaccgcg caggtgcttg
     3781 acgcgctgct cgcccaagac ccaggcgatc gcgtcggcaa cgttgctctt gccgcatccg
     3841 ttcggcccga caaccgcagt tattccctcg ccggtaaagc gaaggtcagt atggtc
//
LOCUS       DATDBY010000606         2098 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_270695, whole genome shotgun sequence.
ACCESSION   DATDBY010000606 DATDBY010000000
VERSION     DATDBY010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_270695"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..858)
                     /locus_tag="VIT19_11365"
     CDS             complement(<1..858)
                     /locus_tag="VIT19_11365"
                     /inference="COORDINATES: protein motif:HMM:TIGR01409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HEY5839625.1"
                     /translation="MSSSRRTFLKLSAMAGGGVGLGMIAGPPASTTPRGLPARGPRSA
                     GGSDPAQKNPKSLRILILGGTGFTGPFQVRYALSRGHKVTVFNRGRTHPGELPKEAEQ
                     LIGDRNGQLDALKGRTWDVVIDNPATLPVWVRDAAQILKGNADRYVYISSTAVYADTS
                     KQGMDETAPLVKYTGADPLKETSATMRASNFSLFGPLKAQSEAEAEKWFPNKTLIIRP
                     GYIVGPGDESDRWTYWPVRVERGGEVLAPGSPSDPIQIIDARDLAEWTIRMVEQGTVG
                     AFNATGPKSK"
     gene            complement(998..>2098)
                     /locus_tag="VIT19_11370"
     CDS             complement(998..>2098)
                     /locus_tag="VIT19_11370"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5839626.1"
                     /translation="SAGAGHVRAAQALEKAFKETLKGASEVHHFDVLNYTNKVFRHLY
                     SRAYIDLVNNMPEVPGWIYDKLDTPWKHERRRLALDKLNTRPFVKLLREYNPDLIVCT
                     HFLPAEIVSWLKAKERLASRQAIIVTDFDVHAMWLVHHYERYFVAVDEARVYLEALGI
                     PPQKITVSGIPIDPVFALKKDKQAMRAKHGLAPDRTTILLSAGGEGVGSVDALINALL
                     PLQHRVQIVAICGRNEELKKRLSRMAARIKSDATVLLKPFGYTLEMDELMTASDLVMG
                     KPGGLTTSEALAKGLVFVIVNPIPGQEERNSDHLLEAAVAIRCNNLPTLSYKIDRLLA
                     DKARFKAMQGNARRMGRPNAAREIVAQLIASV"
BASE COUNT          419 a          614 c          601 g          464 t
ORIGIN      
        1 ttttgattta ggtccggtgg cgttaaaagc gcccaccgtg ccctgctcaa ccatgcgaat
       61 ggtccattcc gccaaatcgc gcgcgtcgat gatctgtatt gggtccgagg gactccccgg
      121 cgccaggact tcgccgccac gttcgacgcg cacgggccag taggtccatc gatcggattc
      181 atcgcccggc ccaacgatat atcccggacg aatgatgagg gtcttattgg gaaaccactt
      241 ctcagcttcc gcttccgact gcgccttcaa cggcccgaac agagagaagt tgctggcgcg
      301 catagtcgca ctcgtttctt tcagcgggtc cgcgccggtg tattttacga gcggcgcggt
      361 ctcgtccatg ccctgcttgc tcgtgtcggc ataaaccgcc gtggaagaaa tgtaaacgta
      421 gcggtcggca ttacctttca ggatttgcgc cgcgtcgcgg acccagacgg gcagggtcgc
      481 cgggttgtcg atcacgacgt cccaggttcg gcctttcagc gcgtcgagct ggccgttgcg
      541 gtcgccgatt aactgctcag cctctttcgg caattcgccg ggatgcgtgc gcccgcgatt
      601 gaacacggtg actttgtggc cgcgactaag cgcgtagcgc acctggaaag gaccagtaaa
      661 gcctgtcccg ccaaggatca agatgcgcag gctcttcgga tttttttgcg cggggtcaga
      721 accacctgcg gaccggggtc cccgcgcggg cagcccgcgt ggggtggtgg atgcgggtgg
      781 gccagcgatc attccgaggc cgacaccgcc gccggccatg gctgaaagtt taagaaaggt
      841 tcttcgactt gatgacatca attacgctcc tgatgaaact actttcttca cgattcggaa
      901 tcctaccggg ttgcaaaaga tttgtatccg ggttccccga cctgacggtc ggggctatta
      961 catttcggcg cttcgcgcct ttgaaactcc gatcacgtca caccgaagca atcaactgag
     1021 cgacaatctc ccgcgctgcg ttcgggcggc ccatacgtcg cgcgtttccc tgcatcgctt
     1081 taaaccgcgc cttatcagct agcagtcgat cgattttgta ggacagcgta ggaagattgt
     1141 tgcagcggat ggcgactgcg gcttcgagca ggtgatctga gttgcgctct tcctgcccgg
     1201 ggatcggatt aacaatcacg aataccaacc ctttggccaa cgcttcagag gtggtcagac
     1261 cgccgggctt tcccatcacc agatctgaag cggtcatgag ctcatccatt tcgagcgtgt
     1321 aaccgaacgg tttcagcaga acagtcgcat cggacttgat gcgcgcggcc attctgctca
     1381 gacgcttctt gagttcctcg ttacgcccgc agatggcgac gatttgcact cgatgctgta
     1441 acgggaggag cgcattaatg agcgcgtcca ccgaaccaac cccctcgcct cccgcggaaa
     1501 gcaaaatcgt ggtgcgatcc ggcgccagac catgtttggc ccgcatcgcc tgcttgtctt
     1561 tcttcaaagc aaaaacggga tcgatgggga ttccactcac cgtaatcttt tgcggcggga
     1621 tgcccagcgc ttcaagatag acgcgtgctt cgtcgacggc gacaaaatag cgctcgtaat
     1681 gatgaaccag ccacatcgcg tggacgtcaa aatcggtgac gatgattgcc tgccggctgg
     1741 cgagacgctc tttggctttc aaccacgaca caatctcggc ggggagaaaa tgagtgcaga
     1801 caatcaggtc aggattgtat tcccgcaaca gcttaacgaa cggccgcgtg ttgagcttat
     1861 cgagcgccag ccggcgccgc tcatgcttcc agggcgtgtc gagcttgtca taaatccaac
     1921 ccggcacctc aggcatgtta ttgacgagat cgatatacgc tcttgagtaa agatggcgaa
     1981 agaccttgtt ggtgtaattc agcacatcga agtggtgcac ttcgctagcg cctttgagcg
     2041 tttctttgaa ggctttttcg agcgcctggg ccgcgcgcac atgtccggcg ccggctga
//
LOCUS       DATDBY010000607         4006 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_884147, whole genome shotgun sequence.
ACCESSION   DATDBY010000607 DATDBY010000000
VERSION     DATDBY010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4006
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_884147"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..555)
                     /locus_tag="VIT19_11375"
     CDS             complement(<1..555)
                     /locus_tag="VIT19_11375"
                     /inference="COORDINATES: protein motif:HMM:TIGR04214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CSLREA domain-containing protein"
                     /protein_id="HEY5839627.1"
                     /translation="MSKPLTRFLCLTALAFVAMALVLFSPQSVHAASIVVNSLADNTT
                     AGNSLCTLREAILTANNAGNGDCGANSSANDSIAFNAGGTVFLASTLPNIVTGQGTLT
                     INGGGTVTISGDSDNNGTGDVRIFIVDAGATLTLQNLTITKGKLTGLLASGSGSAVFN
                     SGTLNVTGSTFSAHTGEGFGAVIVS"
     gene            complement(853..1497)
                     /locus_tag="VIT19_11380"
     CDS             complement(853..1497)
                     /locus_tag="VIT19_11380"
                     /inference="COORDINATES: protein motif:HMM:NF027338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate-binding family 9-like protein"
                     /protein_id="HEY5839628.1"
                     /translation="MTNPNLIVEAHFTPDDLAVKDLDSPQWSEAAAVQIDHYWSGEPA
                     PVGRHAEARILWSEQALYVRYVCNQAEPLVINDHPQTITKTMYLWDRDVCEIFIAPDP
                     NVVERYFEFEVAPTGEWLDIGLDWTAGKRQTDWQFSSRMATTGRIEKDRVTMAMRIPW
                     NTRLPAPEKGERRRANLFRCVGRDPKLRYLCWQPTRSPQPFFHVPEAFGWLVFK"
     gene            complement(1576..3450)
                     /locus_tag="VIT19_11385"
     CDS             complement(1576..3450)
                     /locus_tag="VIT19_11385"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5839629.1"
                     /translation="MATAVQKFHEEEAIGKTYDWQVAKRLLRYLKPYLRLLFPALVLT
                     LILNLLGVLQPKFTQYAIDWYILPRITTGLNLFVLAFFGVQVFRFVASYFQTVLLNTV
                     GQYVMFDLRKEIYDKLQHQEVAYYDRNPAGRIMTRLTADVDALNELFTSGVTDVLGDL
                     VMIAAIIGVMAYMDWRLTLVTLLTVPMLFVATTWFRKGARRGFDMVRTRIARIFAFLQ
                     EHISGAQTVQIFNAEEKSLRQFAKINDDHRKANIDTIFYYAVFFPLVDFIGAVGIALI
                     IWYGGYRVMQDALSLGALVAFIQYLSFLFQPIRDISDKYNVLQGAVVASHRIFKALDL
                     PIEITSPAKPSKTGRAAGRIEFQNVWFAYKDDDWVLKDVSFKVDPGQSVALVGHTGSG
                     KTTITNLLMRFYDVQKGRVLLDGVDVRDWDLQSLRENFAVVLQDVFLFTGTVESNIRL
                     GRKDISDERIQWAATEVRADNFIRRLPHEYQSEVRERGAGLSVGQKQLISFARALAFD
                     PALLILDEATSSIDTETEQLIQEAIARVMQNRTSVIVAHRLSTIQRADNIIVLHHGEL
                     REQGTHQDLLALRGLYWRLYKLQYSDPTWQAETKEDEEGEQVVYRPRGPSFSFGEGMG
                     "
     gene            complement(3462..3887)
                     /locus_tag="VIT19_11390"
     CDS             complement(3462..3887)
                     /locus_tag="VIT19_11390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839630.1"
                     /translation="MQNPQQIEARVEARHRIILIIWFSLLMSISIFFVMTLMIPAHNA
                     EPNTTLSFVLIGAAFMVVIFSVLIKLRVVQRAIEKRDPAMLQTGYVAGFALCEAAALS
                     GVIDHFVTGSSYYYFSFALGALGMLLHFPKKDHVRAATA"
BASE COUNT          920 a         1124 c         1091 g          871 t
ORIGIN      
        1 gctcacgatg accgcgccaa aaccttcgcc ggtatgggcc gagaaggtac tgccggtcac
       61 gttcagcgtg cctgagttaa agaccgccga ccccgagccg ctggcgagaa ggccagtcag
      121 ctttccttta gtgattgtca gattttgcaa agtgagagtt gcacctgcat ccacgatgaa
      181 gatacgcaca tcgcccgtgc cgttgttgtc tgaatcgccg ctgatggtca ccgtgccgcc
      241 accattaatg gtcaacgttc cctggcccgt gacgatgttc ggtaaggtcg aagccagaaa
      301 aacagttccg ccggcgttga aagcgatcga gtcattagcg ctgctgttgg cgccacaatc
      361 gccgttgccg gcgttgttgg cagtcaggat cgcttcgcgc agcgtgcaca ggctgttacc
      421 ggccgtagta ttgtcggcaa gcgagttgac cacgatgctg gcggcgtgaa cggattgcgg
      481 actgaaaagc acgagcgcca tggcgacaaa agccagcgca gttagacaca ggaatctggt
      541 taggggctta gacatttttc tttcgaaggg aaccctcttt tgttcttaga tcaccaaaga
      601 ggaaaaggtt ccagcggtga gcaccagagc ttgtcctgct tttctcgcaa acctacagca
      661 attccgcagt ttgaggattg aacggcagcc gcgacttcgc tcactagccc ttaacttccg
      721 agtggcgaat tctaattact ggatgtgatt cccgcaagtg aattcttggc gaattcctct
      781 ttaggtaggc gcgaacataa gcttcattac ttgctaacaa taagatttac tacttgcaag
      841 taataagact tactacttga agactaacca gccgaaggcc tctggtacgt ggaagaacgg
      901 ctgcggggag cgcgtcggct gccagcacaa ataacgcagt ttcggatctc tcccaacaca
      961 acgaaagaga ttagcgcgcc ggcgttcgcc cttctcgggt gccggcagcc gtgtgttcca
     1021 cggaattcgc atcgccatcg tcacgcggtc tttttcgatt cgtccggtag tggccatgcg
     1081 tgagctgaac tgccagtcgg tctgtcgttt tcccgccgtc caatcgaggc cgatatcgag
     1141 ccattctccg gtcggggcta cttcgaactc aaagtatctt tcgacaacgt taggatcggg
     1201 ggcgataaag atctcgcaca cgtctcgatc ccacaggtac atcgtcttcg ttatcgtctg
     1261 cggatggtcg ttgatgacga gaggttcagc ctgattgcaa acatagcgaa cgtacagcgc
     1321 ctgctctgac caaagaattc gcgcttcggc gtggcgacca acaggagcag gctcgcccga
     1381 ccagtagtga tcgatttgga cggcggcggc ttcagaccac tgggggctgt ccaaatcctt
     1441 caccgccaga tcgtccggcg tgaaatgcgc ttcgacaatg aggttagggt ttgtcacgtg
     1501 tctttagtgc cgttaggcac taaatgttta tagctgatga cgcaacggac gcgttcacgt
     1561 aggcggtgct gatcttcagc ccattccttc accaaacgag aaactcggtc cgcgcggccg
     1621 atagacaact tgttcgcctt cctcgtcttc tttggtttcc gcctgccacg ttggatctga
     1681 gtactgaagt ttgtaaagcc tccagtacaa gccgcgcaac gccagcaagt cctggtgcgt
     1741 gccctgctcg cgaagctcgc cgtgatgcaa cacaatgatg ttatcggcac gctgaatcgt
     1801 tgaaagccgg tgcgcgacga tcacggaagt acggttctgc atcacgcgcg cgatcgcctc
     1861 ttgaatcagc tgctcagttt ccgtgtcgat cgaactggtc gcttcgtcaa gaatcaacag
     1921 cgccggatcg aatgcgagcg cgcgcgcgaa actgattagt tgcttctgcc cgaccgacag
     1981 tccggcgccg cgctcacgca cctccgactg gtactcgtgc ggcaggcggc ggatgaagtt
     2041 gtcggcccgg acttccgtcg ctgcccactg gatgcgttca tcggaaatgt ctttacggcc
     2101 gaggcggata ttgctctcga cggtgccggt gaacagaaat acatcctgca aaaccaccgc
     2161 gaaattctcg cgcagtgatt gcaaatccca gtcacgcaca tcgacgccat cgagcagcac
     2221 gcggcctttc tgcacgtcgt aaaagcgcat caagaggttg gtgatcgtgg tcttgcctga
     2281 acccgtgtgg cccacgaggg ccactgactg gccaggatcg accttgaacg acacgtcttt
     2341 cagaacccag tcatcatcct tataagcgaa ccagacgttt tgaaactcga tgcgacctgc
     2401 ggcgcggccg gtcttcgaag gctttgctgg tgaagtaatc tcaattggca gatcgagcgc
     2461 tttgaagatt cgatgcgacg cgacgacggc gccctggagt acgttgtact tgtctgagat
     2521 gtcgcgaatc ggctgaaaca gaaaactcaa atattgaatg aaggcgacga gagcgccgag
     2581 cgatagcgca tcctgcatca cccgataacc gccgtaccag atgatgagcg caatgccgac
     2641 cgcgccaatg aaatcgacca gcggaaagaa cacggcgtag taaaagatcg tgtcgatgtt
     2701 tgctttgcga tggtcatcgt tgattttggc gaactggcgc agcgatttct cttccgcgtt
     2761 aaagatctgg acggtctgcg cgccggagat atgctcctgc aagaacgcaa agatacgcgc
     2821 gatgcgcgtg cgcaccatgt caaaaccgcg gcgcgcgccc ttgcgaaacc aggtcgtcgc
     2881 cacgaacagc atcggcacgg tcagcagcgt taccagcgtc aaacgccaat ccatgtaagc
     2941 catcacgccg atgatcgccg caatcatcac gagatcgccc agtacatcag tcacgcccga
     3001 agtgaacaac tcgttcagcg cgtccacgtc cgccgtcagc cgggtcatga tgcgtcccgc
     3061 cggattgcga tcgtagtaag caacttcctg atgttgcagt ttgtcgtaga tctctttccg
     3121 caggtcgaac atcacgtact gcccgactgt gttcagcagc acggtttgga aataggaagc
     3181 cacgaacctg aaaacctgaa cgccaaagaa cgccagcacg aacagattca aaccggtcgt
     3241 gattcgcggg aggatgtacc aatcgatcgc gtactgcgtg aacttgggtt gcagcacccc
     3301 gagcaggttc aaaatcagtg tgagcacgag cgccggaaac aacagccgca gatacggttt
     3361 cagataacga agcagacgct ttgccacctg ccagtcgtaa gtcttgccga tggcttcttc
     3421 ttcgtggaat ttttggactg cggttgccat ttttactgct gctaagcggt ggccgcgcgc
     3481 acgtgatctt tcttcggaaa atgcagaagc attccgagcg cccccagcgc aaatgagaaa
     3541 tagtagtagc tcgagcccgt gacgaaatgg tcaatgacgc ccgacagcgc ggcagcttca
     3601 cagagcgcaa agcccgcaac gtatccagtt tgcagcatcg ccgggtcgcg cttttcaatc
     3661 gcgcgctgga cgacgcgcaa tttgattaga accgaaaaga tcaccaccat gaaagcggcc
     3721 ccgatcaaga cgaaactcag cgtagtatta ggttcggcgt tgtgggctgg aatcattagc
     3781 gtcatcacga aaaagatcga gatgctcatc aataacgaga accaaataat caagattatc
     3841 cgatgacgag cctcgactct tgcttcgatt tgctgaggat tctgcatggt cgtgcctcct
     3901 aagttgcggc caactcctct tccagtagct gtcgctcgta aagatccgcg tattcaccac
     3961 cgagcgccaa cagctcgacg tgcgtgcctc gctcgatgat gcggcc
//
LOCUS       DATDBY010000608         3439 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2308839, whole genome shotgun sequence.
ACCESSION   DATDBY010000608 DATDBY010000000
VERSION     DATDBY010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3439
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2308839"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..682
                     /locus_tag="VIT19_11395"
     CDS             <1..682
                     /locus_tag="VIT19_11395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839631.1"
                     /translation="VVAITFGDNGVPIEQLGKTYQMRVSESEHKRILRDGLVYYVTVP
                     IKKPGAYQLRMSLRDSASERIGSASQFIEAPDIKKKRVALSGIILRAQSAVQPGGALA
                     SAAGEGREEGGARTSAAVRQFKPGTIIEYAFFIYNAKLEKGSSRPQLITQAKLFHDGK
                     EIFSGKELRYDSSGQIDLQRLPTGGAIQLANSMEPGDYVLQVIVTDPLADKKHRITTQ
                     WMDFQVVK"
     gene            858..2975
                     /locus_tag="VIT19_11400"
     CDS             858..2975
                     /locus_tag="VIT19_11400"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5839632.1"
                     /translation="MIAAVPAQQPTPSPGPTQDKRQQAEGDDVVRITTNLVQVDAVIT
                     DNDGKPVSDLKPDDVELFEDGRKQKITNLSYQVLDPPPTDERPAKPSGNDKNAAPVPP
                     TRIRPENVRRTIAIVVDDLGLSFESVHFVREALKKFVDRQMQEGDLVAIVRTAGGMGA
                     LQQFTTDKRQLYAAIDRIRWHASGRGLIGAFAPIGAAMPGAEQGPSDPSFIPGEDAEQ
                     SREDVLTVGTLGSIGYVVRGLRELPGRKSVLLVSDGLNLLTAENLGRNQRTLEAMQRL
                     TDLANRAAVVINTLDARGLQTLGFTAADNTAGLRPDQSARLFANRLRTFSASQDGMFY
                     LAETTGGISIKNNNDLSGGIRRVLEDQKSYYLIAYRPDESTFDERGRRQFHKLTLKVT
                     RPGKYKVRMRTGFYGFTDEERRPPSTPVQQLKDALVSPFGATGVHLQLTSLFANDPKQ
                     GSLVRSILYIDPRDLTFTEEPDGKRKCVFDLMAITFGDNGVPIDQVGRTYTIVLRDDE
                     FKRVMREGLVYYATVPIKKPGAYQLRVSLRDSSTERVGSASQFIEAPDIKRKRLVLSG
                     LIIRGENAATYTETATTRDEGREEGDVEASPAIRRLKPGMVVSYGYFIYNSRIDKASS
                     RPQLTTQVRLFRDGKEVYSGKEIPFDTTGQGDLQRLAVGGAIQLGPAMEPGEYVLQVI
                     VTDPLADKKHRIATQWMDFQIVK"
     gene            2988..>3439
                     /locus_tag="VIT19_11405"
     CDS             2988..>3439
                     /locus_tag="VIT19_11405"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5839633.1"
                     /translation="MRILHLSSARHFGGGERHFVDLTNGLTRSGHEVFAATTPESPLL
                     PELQELPAGNILKLPFRKPFDVASAWKLRRFARDRDIEIIHAHMARDYPLASLAAGGV
                     RPRLVLTRHVLFPMGKLHKLTRRRVARVIAVSEAVAASLREQNIFDDA"
BASE COUNT          796 a          957 c          986 g          700 t
ORIGIN      
        1 cgttgtggca atcaccttcg gcgacaacgg cgttcccatc gagcagctgg gaaagacgta
       61 tcagatgaga gtgagcgaaa gcgagcacaa gcggatcttg cgcgacgggt tggtgtacta
      121 cgtcaccgtg ccaatcaaga agccgggcgc atatcagttg cggatgtcgc ttcgcgattc
      181 agcgagcgag cgcatcggct cagcgagtca attcatcgag gcgcctgata tcaagaaaaa
      241 gcgggtggcc ctttccggta ttatccttcg ggcgcaaagc gccgttcagc ctggcggggc
      301 gctcgcctcg gctgcaggcg agggccgcga agagggcggc gcccgaacca gcgccgcggt
      361 gcggcaattc aaacccggaa cgatcatcga gtacgcgttc ttcatctaca atgcgaagct
      421 ggaaaagggg tcatctcgcc cgcagctcat tacacaggcc aaattgtttc acgacgggaa
      481 agagatcttc tcgggcaaag agcttaggta tgacagcagc ggccaaatcg acctccaacg
      541 attgccaacc ggcggcgcga ttcagctggc taatagcatg gaacccggcg actacgtgct
      601 tcaggtgatt gtgaccgacc cgctcgccga caagaagcat cggatcacga cgcaatggat
      661 ggatttccag gtcgtaaagt gaaaccggcc agagcggtgc gcaagaatat ccgaagcacc
      721 taacaaataa atcgacgctc cgaaactggc cttgaactga tggcccgtga actgttcttt
      781 ttcgtaacga agctcgtcag cgtattatct accccatgaa caagcgactc ctcctcgcga
      841 tcctcctagc tggtcaaatg atagccgctg tccccgcgca gcaaccgacc ccgtcgccgg
      901 gaccgactca ggacaagaga cagcaagccg aaggtgacga cgtagttcgc atcactacga
      961 acctggttca ggttgatgcg gtgattaccg ataacgatgg gaaaccggtg tcagatctca
     1021 agccggacga tgtcgaactt tttgaggatg gtcgcaaaca aaagattaca aatctttctt
     1081 atcaggttct cgaccctccc ccgactgacg aacggcctgc gaaaccatca ggcaacgata
     1141 agaacgcggc gcctgttccg ccgactcgaa ttcggcctga gaacgtccgc cgcaccatcg
     1201 caatcgtggt tgatgacctg ggactgtctt ttgaaagcgt acatttcgtc cgcgaggcgt
     1261 tgaaaaaatt cgtcgatcgt cagatgcagg agggtgacct ggtggccatc gttcgcaccg
     1321 ccggcggcat gggggcgctg caacaattca cgactgacaa acgtcagctt tatgcggcga
     1381 tcgaccgtat tcgatggcat gcaagcggac gtggcctaat cggagctttc gcaccaattg
     1441 gcgcagcaat gccgggtgcg gaacagggcc ccagtgaccc aagcttcatc cccggagagg
     1501 acgccgagca atctcgcgaa gatgtcctga ccgtcggaac tctcggctcg atcggctatg
     1561 tcgtccgggg cctgcgggaa ttgccgggaa gaaagtcggt gcttctggtt tcggacggcc
     1621 tgaatttgct tactgccgaa aacctgggcc gcaaccaacg aacgcttgaa gccatgcaac
     1681 ggttgaccga tctagcaaat cgagccgcgg tcgtgatcaa cacgttggat gcccgtgggc
     1741 ttcagacttt agggtttacc gccgcggata acaccgctgg cctgagaccc gatcagtcgg
     1801 cccgcttatt cgccaatcgg ctgaggactt tttccgctag tcaggatggg atgttttacc
     1861 tggctgaaac gaccggcggc atttcgatta aaaacaataa cgatctgagc ggcggcatcc
     1921 gtagggtgct ggaagatcag aagagttatt acctcatcgc atatcggccc gacgagtcga
     1981 cttttgatga acgtgggcgc cgccagtttc ataagttgac tctgaaggta acgcgtcccg
     2041 gcaagtacaa ggtccggatg cgaacaggct tttacggttt cacagacgaa gagcgacgac
     2101 cgccgagtac gccggtgcaa caactaaagg acgcattagt gtcgcctttc ggcgcgaccg
     2161 gtgttcatct gcaattgacg tcgttgtttg cgaatgaccc taaacaaggg tcgctggtgc
     2221 gctctattct ctacatcgat ccgcgcgatc taacgtttac ggaagaaccg gacggtaagc
     2281 ggaaatgcgt attcgacctg atggcaataa cgtttggcga caacggagtc cccatcgacc
     2341 aagtcggaag gacctacaca atcgtcttac gcgatgatga gtttaagcgc gtgatgcgcg
     2401 aagggctggt ctattatgcg acggtcccaa tcaagaagcc cggcgcttat cagttgcggg
     2461 tatcgctgcg cgattccagc accgaacggg tcggatctgc gagtcagttt attgaagccc
     2521 ctgacattaa gagaaagcgc cttgtcttgt caggccttat cattcgcggc gaaaacgctg
     2581 cgacttatac tgagacggcc acgaccagag atgaggggcg ggaagagggc gacgtcgaag
     2641 ctagccccgc catcaggcga ttgaagcccg gcatggtagt gagctacggt tattttatct
     2701 acaactcgcg aatcgataag gcgtcgtccc gtcctcaact tacgacccaa gtcagacttt
     2761 tccgcgacgg caaggaagtc tattctggaa aagagattcc cttcgacacc accggacaag
     2821 gcgatctgca aaggctagcc gtcgggggag cgattcagct cggcccagcc atggaacccg
     2881 gcgagtatgt gcttcaggtg atcgtgaccg acccgctcgc cgacaagaag catcggatcg
     2941 cgacgcaatg gatggatttc cagatcgtga agtgaagcgc gttcgcgatg cggattcttc
     3001 acttatcttc agcacgccat ttcggaggag gcgagcgtca ctttgtcgat ttaacgaatg
     3061 gccttacgcg cagtggccac gaggtctttg ctgctacaac gccggagtcg ccgttacttc
     3121 ctgaacttca agaacttccc gccggtaaca ttctaaagct cccgttccga aaaccttttg
     3181 acgtcgcgtc ggcctggaag ctgcgccgat ttgcgcgcga tcgcgacata gaaatcattc
     3241 atgcgcacat ggcgcgcgat tacccgctcg catctttggc tgcaggaggc gtgaggccgc
     3301 ggttggtgct gactcgacac gttctgtttc cgatgggcaa gcttcacaag cttacgcgcc
     3361 gacgcgtcgc gcgcgtgatt gcggtatcag aagccgtcgc cgccagcctg cgcgagcaga
     3421 acatcttcga cgatgctca
//
LOCUS       DATDBY010000609         4047 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_418140, whole genome shotgun sequence.
ACCESSION   DATDBY010000609 DATDBY010000000
VERSION     DATDBY010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4047
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418140"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="VIT19_11410"
     CDS             complement(<1..202)
                     /locus_tag="VIT19_11410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839634.1"
                     /translation="MKKLALLIVAALFGSMLLVTSPASSQGWKEKVRKNAKKIENNYV
                     VVLDDSVIGERGEYSIADYMAED"
     gene            complement(445..3267)
                     /locus_tag="VIT19_11415"
     CDS             complement(445..3267)
                     /locus_tag="VIT19_11415"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5839635.1"
                     /translation="MSLSSGTELGHYHIQSKLGEGGMGEVYLALDEKLGRKVALKVLP
                     AELASNQDRMRRFTQEAKAAAALNHPNIAHIYEIGDHDGTSFIAMEYVDGYTLRQLIH
                     DRQTDLAKLLRWLQHVAEGLAKAHSAGIVHRDLKPDNIMVTREGHAKILDFGLAKLIE
                     PQSLSGQRASDGSSEVATALMQQHSTPGAVLGTVGYMSPEQAQGKVNEIDHRSDVFSF
                     GCILYEVITGRKAFGGKDTIDSLNKIIREQPEAIATVAPNAPVDLQRIVRRCLAKDPE
                     ERYQTIKDVALEIKDVRREIQNAVGINTTVPPSSSSMAHSVASPSSLESQAAVTSLSP
                     AATSAHPSSAEYIASQIGRHKKGILIGVGLGVVAVGLIIGLYHFWWSGERHRPPSGPM
                     KISRLVTGIKGISNASISPDGKYVAYAVYQKETVSLHLRQVSTGSDREIVAPVANANI
                     NGTVFSPDSELVYYNFRHRDTSPLGALYQVPVIGGREPKKILEHLQNIISFAPDGKRF
                     AFVREYFKTADSAVLIGSIDGGEPQAIAKRTGNDFYLGIPAWSPDGSRLVCPVGTDTG
                     GTKFGLVEIPAAGGSEQRLTSFNWHGDLQRPIWLKDGSGLVVNGKERSTSPYQIWRVS
                     YPGGEVTRVTNDLTEYGSSTFGLTADSSTIMTLASERSSRIWLAAPSFQAGEATQLTE
                     GKTDGQYGISWTPDGRIVYVAKTGDDLDLWIMNGDGSGKRQLTANEDAETNVDISPDG
                     RYIVYTAARPGGNDQIWRMNIDGTNVIPLARGDYYHWLPRVSPDGKWVVFGAFKSGTP
                     RPWKVSIDGGESIKVADLPFNALGFLPDGTKLYGEYFDDQISPPRWRGAIVSFDTGQL
                     VKAFDLPDGANRGVLSDEKTVIYNAKKSDVDNLWSRPIDGGEPKQLTKFMSETIYNFS
                     LSRDFKKYAIARGTSSSDIILIKDFQ"
     gene            complement(3346..>4047)
                     /locus_tag="VIT19_11420"
     CDS             complement(3346..>4047)
                     /locus_tag="VIT19_11420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839636.1"
                     /translation="QRVTWDLRYPAANLPPPPNPESEDPFADPSGGPLVMPGTYKVSV
                     SKRVNSVTTSMGESQTFQVVVEGQERMTQADRVALVEFQTKVARLQRAVQGTLDAANA
                     LTPRLAAIRRALLETPNAPANLLDEAAALEKRKNEILRALRGDQALRARNINLPPSIS
                     QRVNGIVGGQRLSTQRPTQTHIDQYAAAAAEFEGTLARLRQLIESDLQRLEKQMEAAG
                     APWTPGRIPEWKDQP"
BASE COUNT          817 a         1186 c         1098 g          946 t
ORIGIN      
        1 tgtcttcagc catatagtcg gcgattgagt actcgcctcg ctcgccgatc accgagtcgt
       61 ccaaaaccac gacgtagtta ttctcgatct tctttgcatt cttgcgaacc ttttccttcc
      121 atccctggct gctggcgggc gatgtcacca gcagcatcga gccgaacagt gctgcgacaa
      181 tcaacaaagc tagtttcttc attttgggtg ctccttcttg cggacggttt gttgccgatg
      241 agagctggcg agttgagcgc ctgagacacc caacgggccg ctcccgcgag tactgcaaaa
      301 aagttgccgg acgaaataac atgcctctcg tggctacttt ggcgaggtgc aggggcacta
      361 agcgcgggca gtataggcac aatctcgcga ccgcgcaaga aaaaatattt ctttgtgggt
      421 tttagtttct gactgtcctg tggactattg gaaatccttg atcagaataa tgtcggacga
      481 ggacgtcccg cgggcgatgg cgtacttctt gaagtcgcgc gatagcgaga agttatagat
      541 tgtttcggac atgaattttg tgagttgctt cggttcacca ccgtcaattg gccggctcca
      601 gagattgtcg acgtccgact tcttggcgtt gtagatcact gtcttctcat cggacagtac
      661 tccccggttc gcgccgtcgg gcaaatcgaa agcctttaca agctgaccgg tatcgaacga
      721 cacaattgcg ccccgccacc tcggcggact gatttggtcg tcaaaatact ctccgtacag
      781 ctttgttccg tcaggcagaa atcccagggc gttgaaaggc aaatccgcca cctttatcga
      841 ttcgcctccg tcaatcgata ccttccaggg ccgtggagtg cccgacttga atgctccgaa
      901 gaccacccat ttgccgtcag gagagactcg tggtaaccaa tgatagtaat cgccgcgcgc
      961 cagcggaatg acattggtac cgtcgatgtt catccgccag atttgatcgt taccgccagg
     1021 tcgggccgcc gtgtaaacga tgtaacggcc atcaggtgag atgtcgacat ttgtttccgc
     1081 atcttcatta gcggttagct gccgtttgcc tgagccatcc ccattcatga tccatagatc
     1141 caagtcgtct cctgtcttcg cgacatagac gatgcgcccg tcaggagtcc aactaattcc
     1201 gtactgacca tccgtcttac cttccgtcaa ctgcgtggcc tcgccagcct gaaaactggg
     1261 cgccgccagc cagattcgcg aagacctttc actggccaag gtcattattg tcgaagagtc
     1321 ggcagtcaaa ccaaaggttg atgagccgta ttcagtcaga tcgttagtga ctcgggtgac
     1381 ctcgccgccg ggataagaca cacgccaaat ctgatatgga ctggtagaac gctctttgcc
     1441 attcaccacg agcccgcttc cgtctttcaa ccaaatcggc ctctgcaggt cgccatgcca
     1501 attgaatgac gtcagccgct gttcacttcc cccagcagct ggtatttcga ccagaccgaa
     1561 ttttgtccca ccggtgtcgg taccgaccgg acatactagt cggcttccgt ccggcgacca
     1621 cgctggaatg cctagataaa aatcattgcc ggttcgtttc gcgatcgctt ggggttcacc
     1681 gccatcaata ctcccgatta gaacagcaga atcagcggtc ttaaagtatt cacggacaaa
     1741 cgcgaaccgt ttaccgtccg gcgcgaaact gatgatgttc tgaaggtgct cgagaatctt
     1801 cttcggttcc cgtcccccga ttactggaac ctggtagagc gcgcccagcg gactggtgtc
     1861 ccggtgccga aagttgtagt aaacaagctc gctatcaggc gagaagacgg tgccgttgat
     1921 gttggcattg gcaaccggcg cgacgatttc acgatcgctg ccggtcgaaa cctggcgcag
     1981 gtgcagactg acagtctctt tctgataaac cgcataggcc acgtacttgc cgtccggtga
     2041 aatcgaagcg ttgctgattc ctttaattcc ggtcacgaga cgtgagattt tcatcgggcc
     2101 ggaaggtggt ctatgtcgct cgccagacca ccaaaaatga tagagcccga ttattagtcc
     2161 aaccgcgaca actcccagcc cgacgccaat gagaatccct ttcttgtgac ggccaatttg
     2221 cgacgcgatg tattcggcgc tcgatggatg cgcggaagtg gccgccggcg acagactggt
     2281 caccgccgcc tggctctcaa gtgacgaagg actagcgacg gagtgagcca tcgatgaact
     2341 cgatggcggc acagtggtat tgatgccgac ggcattctgt atctcgcgcc gcacgtcttt
     2401 gatttcaagc gcgacgtctt tgatcgtctg ataacgctct tcaggatcct ttgccagaca
     2461 acggcggacg atcctctgca agtcgacggg agcattcggc gcgaccgtgg caatcgcctc
     2521 cggttgttcg cgaatgatct tgttgagcga atcaatcgta tctttgcctc cgaaagcttt
     2581 tcgccccgta attacttcat agagaatgca gccgaatgaa aagacgtccg agcggtgatc
     2641 gatctcgtta acttttccct gtgcctgctc gggcgacatg tagccgacgg tccccagcac
     2701 cgcgcccggc gttgagtgtt gctgcatcag cgccgtcgcg acttcgcttg atccgtcact
     2761 cgcgcgctgg cccgaaaggc tctgcggctc gatcaatttc gcaagcccaa agtccaggat
     2821 cttcgcatga ccttcgcgcg tgaccatgat gttgtccggc ttcagatcgc gatgcacgat
     2881 gccggccgag tgggccttgg ctaaaccttc cgcaacgtgt tgcagccagc gcagaagttt
     2941 cgctaaatcc gtctgccggt cgtgaatcag ttgacgcagc gtgtaaccgt caacgtattc
     3001 catcgcaata aagctggtgc cgtcgtggtc gccgatttcg tagatgtgcg cgatgttcgg
     3061 atgattgagc gccgccgcgg ccttcgcttc ctgagtaaac cggcgcattc ggtcctgatt
     3121 agaagcgagc tcagccggca acactttcag cgccaccttg cgcccgagct tctcgtcgag
     3181 cgcgagatac acttcgccca ttccgccttc gccgagcttc gactggatgt ggtaatgacc
     3241 gagttctgtg cccgaggaaa gactcatttt gtcgactgcc gccgattcta tcggagtgaa
     3301 tcgagcgagg ctagttttgc ggcacgagcg attgtcaggc cttcgctatg gttgatcctt
     3361 ccactccgga atccgtcccg gcgtccaggg agcacccgcg gcttccatct gcttttccag
     3421 cctctgaaga tcggattcga tcaattggcg cagtcgcgcc agcgtccctt caaactcagc
     3481 ggcagcggcg gcgtattgat cgatgtgagt ttgcgtcggc cgctgagttg acaggcgctg
     3541 cccgccaacg atgccgttca cccgctgact gatcgacggt ggcaagttga tgttgcgcgc
     3601 gcgcaaagct tgatcgccgc gcagggcccg cagaatctcg ttcttccgct tctccagcgc
     3661 cgcggcttcg tccagcagat ttgccggagc gttcggagtc tccaacaacg cgcgtcgaat
     3721 tgcagcgagg cgtggggtca gggcattcgc ggcgtccagc gttccctgga ctgcgcgttg
     3781 caatcgcgcg actttcgttt gaaattcaac cagggcaacg cggtccgcct gcgtcatgcg
     3841 ctcttgacct tccaccacaa cctggaacgt ctgcgactcg cccatcgaag tggtgacgct
     3901 gttcacccgc ttcgagactg acactttgta cgttccgggc attaccaggg gtccgcccga
     3961 cggatcggca aaaggatctt cactttccgg atttggcggc ggcggcaggt tggctgccgg
     4021 atagcgcaaa tcccacgtca cccgttg
//
LOCUS       DATDBY010000610         2832 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1289452, whole genome shotgun sequence.
ACCESSION   DATDBY010000610 DATDBY010000000
VERSION     DATDBY010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2832
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1289452"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..993)
                     /locus_tag="VIT19_11425"
     CDS             complement(34..993)
                     /locus_tag="VIT19_11425"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY5839637.1"
                     /translation="MKKLIAGVCFLALFAACQPVANDNMANANKTPETKAVAPPSEAD
                     MIAKEKASWDAFKRKDADAFKKLLAPEYIEIIGNGTMDLAATVSGMNDVTLTDVTFAD
                     WKMTQIDKDLVLLTYTTTQKGTYKGEPFDGTNRHGAAWINRNGEWLAIYFQETPVPKV
                     PPPPPPASKPTASSASPAASPAKVETTDDVIANEKLVWELFRTRNFDAFQTLLAPEFM
                     EIQPTGVYDRAGTVKGVSEMDASKFELADWKAVKFDEDAALVTYTVTMKGPKPQKEYH
                     ATIWAKRDGKWLGFHHQGTPAAPAPGGSPSPSKNASPSPTKKP"
     gene            complement(1101..1643)
                     /locus_tag="VIT19_11430"
     CDS             complement(1101..1643)
                     /locus_tag="VIT19_11430"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEY5839638.1"
                     /translation="MRPLRYSINLTLDGCCDHRAIPADEDLHRHAVENLEQADALLFG
                     RVTYEMMEAAFRPPTEGLLDWMEPFARTIDAAKKYVVSSTLDRVDWNAELVRGDLGQA
                     VQQLKRESGKGLFTGGVKLPMALAELGLIDEYEFVVHPRLAGHGPTLFAGLSKPVDLK
                     LVGRLEFGSGAVALRYEPRR"
     gene            complement(1744..2427)
                     /locus_tag="VIT19_11435"
     CDS             complement(1744..2427)
                     /locus_tag="VIT19_11435"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY5839639.1"
                     /translation="MKKLNLTQMALVSALVAMGAVSCTPSGNTNTTTTTAVTATPAPT
                     PDTNAIVAEITKLENDWPRIIRERDAAALRRFEADDIWLLYFNGTRGTKEIDVKDVEA
                     GNLTFEAWEISEMQVKPLGNDAAVATLLITVKNGKYKVAENRSQDISGRYRAMDTFAR
                     RNGQWQIVASSLVKLTPDAERELAAAASASPKASPGATASPATKASPAPKASPTRRPP
                     PPPAPASTP"
BASE COUNT          566 a          831 c          770 g          665 t
ORIGIN      
        1 catcttaggg cgcgcgtgac gcgcgcgaac cgattacggt ttcttcgtag gcgaaggaga
       61 cgcgttcttc gaaggtgaag gcgatccccc aggcgccggg gcggccggtg ttccctgatg
      121 atggaagccg agccactttc catctcgttt agcccagatc gtcgcgtgat attccttctg
      181 cggctttgga cctttcatag tgacggtgta agtgaccaac gcagcgtcct cgtcgaactt
      241 cacagctttc caatcggcga gctcgaactt tgaagcgtcc atctcagaaa cgcctttgac
      301 ggtgccggcc ctgtcgtaaa cgccagtcgg ttgaatttcc atgaactcgg gcgcaagcag
      361 cgtctgaaac gcgtcaaagt ttctcgtcct gaataactcc caaacgagtt tctcgttagc
      421 gatgacatca tcggtcgtct cgactttcgc cggtgaagct gcgggcgatg ctgatgatgc
      481 ggtcggcttg gaagctggtg gaggcggagg cggaaccttg gggacaggcg tctcctggaa
      541 gtaaatcgct aaccattcac cgttacgatt tatccacgcg gcgccgtgac gatttgtccc
      601 atcaaaaggc tcgcccttgt acgtgccctt ctgggttgtc gtgtaggtta aaagcaccag
      661 gtctttgtcg atctgcgtca tcttccaatc ggcaaaagtc acgtccgtaa gcgttacgtc
      721 attcataccg ctcacagtcg cggccaaatc catcgtgccg ttaccaataa tctcaatgta
      781 ctcaggcgcc agcagcttct tgaaagcatc tgcgtctttc cttttgaagg cgtcccaact
      841 ggctttctcc ttcgcgatca tgtcggcttc agatggcggc gcaacggcct ttgtctcagg
      901 tgtcttgttg gcgttcgcca tgttgtcgtt cgccacgggt tggcacgcgg caaacagcgc
      961 gagaaaacac acgcctgcga tcagtttctt cataagcttt acctctggat tggattaagt
     1021 gcttatgctt ctataacaaa actgagacgt cgtcaacgca accgggtagt gcgtagggtc
     1081 ctgaatcttg tgttgcccgg ctatcttctc ggctcatacc gcaaggccac ggcccccgag
     1141 ccgaactcca gccggcccac gagcttcaag tcgacaggtt tcgatagccc cgcgaataag
     1201 gtcggcccgt ggcccgctag tctgggatgc acgacgaact cgtactcatc gatcaatccc
     1261 agctccgcca acgccatcgg gagcttcacg cctcccgtga acagtccctt acccgactcc
     1321 cgcttcagct gctgaaccgc ctgccccaga tccccgcgca caagctccgc gttccaatcg
     1381 acccggtcca gggtgctcga cacgacgtac ttctttgccg cgtcgatcgt ccgggcgaac
     1441 ggttccatcc aatcaagcaa tccttccgtc ggcggccgaa acgccgcctc catcatttcg
     1501 taagtcaccc ggccaaagag gagagcatct gcctgttcga ggttttccac ggcgtgacga
     1561 tgtaagtctt cgtccgcggg aattgcacga tgatcgcagc acccgtccaa tgtgagattg
     1621 atggaatacc gaaggggtcg cattacgtaa gtaaccgttg atggtcaatg ttgaccgggc
     1681 ggcgcgattt cacgccacgc gatccgtaca agcctggaat ttggccgccg aactcagtaa
     1741 acgttacgga gtactggcag gcgccggcgg tggtggcggt ctccgtgtcg gcgaagcctt
     1801 cggagctggt gaagctttcg tcgccggcga tgcggtcgcc cccggtgacg ctttgggtga
     1861 agccgaagcg gcggcggcca attctcgttc ggcgtccggt gtcagtttca cgagcgacga
     1921 agcgacaatc tgccattgac cgttgcgtct ggcaaatgta tccatcgccc gataacggcc
     1981 gctaatatcc tgcgatctgt tttcagcgac tttgtacttg ccgttcttga cggtaattaa
     2041 aagcgtcgca accgcagcgt cattgccgag cggtttcact tgcatctcag agatctccca
     2101 cgcctcaaag gtgaggttgc cggcttcgac gtctttcaca tcgatctcct ttgtgccgcg
     2161 cgtcccattg aagtagagca gccagatgtc atcggcttca aaccgccgca gggctgcggc
     2221 gtcgcgttcg cggatgatgc gcggccagtc gttctcaagc ttcgttattt ccgcgacgat
     2281 cgcattggtg tcaggcgtgg gtgcgggcgt agcggtgacc gcggtagtcg ttgtcgtgtt
     2341 cgtattcccg ctcggcgtac agcttacggc ccccatagcg accagcgccg agaccagcgc
     2401 catctgcgtc aaattaagtt ttttcatcga ccgaaactcc ttcaatatgg gctgcgaaac
     2461 cagctcgaat ttcgagaata ccttattgct ttctaagccc aaaacctacg gcagtcaatc
     2521 gccggaagtg ccagacagcg cggtgtcgaa aaccagttga cttagagttc tacggtggca
     2581 taatggcagg cacaaacgca cggtcggtca gcccaccgaa ccctgaaggc tacagccgtg
     2641 atttatcttt ccgccgcgtt aatctaaccg gccacgagcg taaggaggag taaagatgtt
     2701 tcgcgtgtac ctcaggtcct tttcaattca acttaagagc ttggttcttt ttagttgtgt
     2761 agtaatcctt ttccttttga cgacgtcgac tgccgcggcg caaggctcga aaggcagcat
     2821 caccacgccg ga
//
LOCUS       DATDBY010000611         7807 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2309312, whole genome shotgun sequence.
ACCESSION   DATDBY010000611 DATDBY010000000
VERSION     DATDBY010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 7807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7807
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2309312"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            307..1512
                     /locus_tag="VIT19_11440"
     CDS             307..1512
                     /locus_tag="VIT19_11440"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY5839640.1"
                     /translation="MTVSRRELLSGLAVITAGAALTTNGQPGIAHAGEYMLEPGLIYL
                     NTGSLGPTPRSVLDAVIKAWTQLETNPVAMSYGAGAVHTLADKTRDAVAGLIGCSADE
                     VLLTRSTTNAMNIAALGIDLSRGDRVLTTDVEHEGGSACWKHLEKRRGIGIDRIVIAP
                     EDHDVKAIVERFERAITKQTKVISVSHVITSTGLRMPVREIVALAKGRDILTIIDGAQ
                     AAGNVEVDVRALGCDAYAAPGHKWLLGPKGTGFLYINKAAASRIQPIEWLDGRRYVIG
                     SAGMGALPLVTGLGAAIEAAQKRGIAASEAQNLRLRNRAYEGLKKITKAQVVSVAPGP
                     LATTLVAFRLPPAVDSSAFRVVMRQKYNLMLKQTEKRWGNGMRISPHVFNTEADIDAA
                     LKAIGSELT"
     gene            1533..4229
                     /locus_tag="VIT19_11445"
     CDS             1533..4229
                     /locus_tag="VIT19_11445"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5839641.1"
                     /translation="MPIPPNTKFGQYSIVSKIGEGGMGEVYRARDAKLGRDVAIKVLP
                     ASLSENTDRLNRFEQEAQAAGALNHPNILSIYHIGTHDGAPYIVSELLEGETLRDRMN
                     GNALPQRKAVDFALQIARGLAAAHDKGIVHRDIKPENIFITDDGRVKILDFGLAKLTA
                     PVDGKQPQTEVPTRKVHTDPGTVMGTMGYMSPEQLKDKPVDHRSDIFSFGAILYEMLS
                     GKRAFRADSMPETMSAILREDPPDLSETNKTVSPALERVVRHCLEKNPAERFHSARDL
                     AFAIESLSGSAISSGQTAMMPSVSAEIDKPESKGIRRGFNNAKLAWAVGAVLLVGLLA
                     TLALLYFNRSGSDPHAARLAFVPPPELAFNDTQHDAAVISPDGKKVAFTATSADGKNM
                     LYVRNLDLTEVKLLPGSENALEPFWSPDSRSIAYGSKGKLKRSDLTGANAQVLCDSAR
                     LIGGTWSKDGIIVFAPDYRTTVMQVSAQGGEPKPVNMNFEGNDVERHRFPYFLPDGRH
                     FIFFREQKGVWAGSLDSPEIKQIVADRGVAAYAPQGWLIFLRNDALVAQAFDAGKLTV
                     SGEPIPIITGEKNPPTVRRFSVSDNGILVWQGQWQRNYQLVWYDREGTQTGAIDAPMK
                     AAVGQSPSLSPDGKRLLVRRTLDSGGGPDSNIWVVDLEKGTGLRLTSTFSQMPVWSPD
                     GSRITYNTGNGVAVKAANGSGDAETLLPRTAFTASWSPDGRFIIFMERGVKTRLDMWV
                     LPLFGDKKEYPLSNSPFDEQDPQLSPDGRWLAYTSDETGNYEIYVQSFSADGKLGADK
                     KRVSTAGGRLPVWRRDGSELFFIAADGQMMASSVKTGGTEFGFDAPKPLFKTRTLSLE
                     GAIFREYDVTGDGQRFLIGTRIGDTTVPPPTVILNWTALLKK"
     gene            4500..5402
                     /locus_tag="VIT19_11450"
     CDS             4500..5402
                     /locus_tag="VIT19_11450"
                     /inference="COORDINATES: protein motif:HMM:TIGR03709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2 family protein"
                     /protein_id="HEY5839642.1"
                     /translation="MELKEIAKAAESLATRYRVTGGKEFRLKDIHPDDTADFRSHDKP
                     RAQEALVAGVDALCQLQDLLYAQDCWAVLLIFQAMDAAGKDSAIKHVMSGVNPQGCQV
                     ASFKAPSAEELDHDYLWRCVKHLPERGRIGVFNRSYYEETIVVRVHPEFLESQKLPPQ
                     LLTTDIWDERFRDIRNFERYLTSNGIAVCKFFLHVSKAEQRKRFLARIDDPAKNWKFS
                     ANDVKESAHWDEYMKAYEQTVRHTATDYAPWYVVPADHKWFTRLVVASAVISTLTSLK
                     LAYPKVGAAKQKELKAARQALTRR"
     gene            5490..>7807
                     /locus_tag="VIT19_11455"
     CDS             5490..>7807
                     /locus_tag="VIT19_11455"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839643.1"
                     /translation="MRPSTFRNRSLIAGIVFCLIALTAPIVFAQERGPSPVPPATPSP
                     SPSPEPSRGPDQPAGEDDGRPRDPFSTGTFNGLRFRSIGPAFTSGRVIGIAVDPTNAA
                     KYYVAAASGGVWKTVNNGTTWTPVFDREGSYSIGAITLDPKNPLTVWVGTGENNSQRS
                     VSHGNGLYRSDDGGRSWRNVGLKASEHIGKIAIDPKDSNIVYVAAQGPLWGPGGDRGL
                     YKTTDGGKSWKQILKFSEHTGVTDVVIDPNNPETIYAASYQRRRHMWTLINGGPESAI
                     HKSTDGGATWTRLRAGLPTIDMGRIGLAVSPVDSNVIYATIESTDRKGGIFRSSDRGG
                     SWERRNEFDTTAMYYGKIFTDPKDVDRIYVMNVFLMVSDDGGRTLRRLGERSKHVDNH
                     VIWINPANTDHYLVGCDGGVYESYDRGTFWHFKSNLPITQFYDITTDNATPFYNIYGG
                     TQDNYSFGGPSRTRSASGIVNSDWIVTQGGDGFRSQVDPEDPNTIYSESQNGGLVRFD
                     KRTGERVGIQPQEGRGEDALRWNWDSPFIISPHSRTRLYFAADKLFRSDDRGDTWKLV
                     SGQLSRDLDRDKLPVMGKVWSIDAVAKNASTAHFGNASALAESPRKEGLIYVGTDDGL
                     VQITEDGGRNWRKVEKIGDVPELAYVSRITTSVHDANTVYVAFENHQNADFKPYLFKS
                     TDAGRTWTSIKSNLPANQPVWGIAEDHVNSNLLFAGTEFGLFFTVDGGQKWIQLRGGL
                     PTIQVRDIVIQRRENDLVLGTFGRGIYILDNYT"
BASE COUNT         1777 a         2111 c         2297 g         1622 t
ORIGIN      
        1 gttagcaagg gcgtgtattt gactaaatcg tgaagtcgcc acgaacgttg tgaacaagca
       61 tcgatgctac agtgacgaac tgacgctgac aaggtattga aaatcgcaga atcgaaggcc
      121 tgaccccgtt tcgaggttcc cattggtgga aggcgctgcg ctggtggtag atggcttcag
      181 aaatctcctt cattgcgttc gccaaatcaa acctaacgga agcgatttaa acccgccgca
      241 ggcgtgtcaa tttccgcttc acaccggcag ccgccgcgca tatactggcg cgccaatact
      301 tagcctatga ccgtttcccg acgagaactg ttgtcaggcc tggccgtgat taccgccggt
      361 gctgccttaa ccacgaatgg gcaaccgggg atcgctcatg cgggcgagta tatgctcgag
      421 cctggattga tctatctgaa tacgggttcg cttgggccaa cacctcgctc ggttctcgat
      481 gcggtaatta aggcgtggac gcagctcgag accaatccgg ttgctatgtc gtacggcgca
      541 ggcgctgttc acactcttgc agacaaaaca cgtgacgcgg tcgccggtct gatcggctgt
      601 tcagcggatg aggtgctgct cacgcgcagc acgaccaacg cgatgaatat tgccgcgctg
      661 gggatcgacc tgtctcgcgg cgatcgcgtt ctgacaaccg atgtcgaaca cgaaggaggc
      721 agtgcctgct ggaaacacct tgagaagcgg cgcggcatcg gcatcgaccg catcgtgatc
      781 gctccggagg atcatgatgt aaaggctatc gtcgagcgtt tcgagcgcgc gatcacaaaa
      841 cagacaaagg tgatcagtgt cagccacgta attacctcga ccggcttgcg gatgccggtt
      901 cgcgagatcg tcgcgctggc aaagggccga gacattctga cgatcattga cggtgcgcag
      961 gccgctggaa atgttgaggt cgatgtcaga gcgcttggtt gtgacgctta cgccgcacct
     1021 gggcacaaat ggttgctggg gccgaagggt acgggctttc tgtacatcaa caaagccgca
     1081 gcctcgcgaa tacaaccgat cgaatggctg gacggccgtc ggtacgtcat cggatcggcg
     1141 ggcatgggtg cgttgccatt agttaccggt cttggagctg cgattgaggc ggcgcagaag
     1201 cgtggcatcg cagcatctga agcccaaaat cttcgcctta gaaatcgagc ctacgaaggc
     1261 ttgaagaaaa tcactaaggc gcaggttgtg agcgtcgcgc cgggaccgct cgcgacgaca
     1321 ttggtcgcgt tccgtcttcc gccagcagtg gatagctccg cattccgcgt cgtcatgcgg
     1381 caaaaataca acctgatgtt gaagcagact gaaaagcgtt ggggcaacgg gatgcggata
     1441 tcgcctcatg tgttcaatac ggaagctgac atcgatgcgg cgctgaaagc gatcggctcg
     1501 gaactgacgt gagctgacac gacacttaga caatgccgat tccccccaac acgaagtttg
     1561 gtcagtactc catagtttct aagatcggcg aaggcggcat gggcgaggtg tatcgtgccc
     1621 gtgatgcgaa gctgggacgc gacgtcgcga tcaaagtcct gccggcttcg ctttccgaga
     1681 atactgatcg gctgaatcgc ttcgagcagg aagcccaggc cgccggcgcg ctcaatcatc
     1741 ccaacatcct cagcatctat cacatcggca cgcatgatgg tgcgccgtac atcgtctcgg
     1801 aattattaga aggtgaaacg ctgcgcgacc gcatgaatgg caacgccctg ccgcagcgca
     1861 aagcggttga tttcgcgctc cagatcgcca gaggtctagc ggctgcccac gacaaaggca
     1921 tcgtccatcg ggacatcaag ccggagaaca tattcatcac cgatgatggg cgcgtgaaga
     1981 tcctcgactt tggtctggcc aaactcaccg ctccggtcga cggaaagcaa ccgcagactg
     2041 aagtcccaac gcgcaaggtc cacaccgatc cgggtacggt gatgggaacg atgggttaca
     2101 tgtcacctga gcagttgaaa gacaagcccg tcgatcaccg ttcggacatc ttttcttttg
     2161 gcgcgattct ctacgagatg ctttccggca agcgtgcgtt tcgcgctgac tcgatgccag
     2221 agacgatgag cgccatccta cgcgaagatc cgccggacct ttccgaaaca aacaaaacag
     2281 tttcgccggc gctcgaacgc gtggttcgtc attgtctgga aaagaatccg gcggaacgtt
     2341 ttcattcggc gcgcgatctg gcttttgcaa ttgagagtct ctcaggcagt gcgatcagtt
     2401 ccggtcaaac ggcgatgatg ccaagcgttt cagctgagat cgacaagcca gagtcgaagg
     2461 gaatccgccg agggttcaac aacgcaaagc ttgcctgggc tgttggcgct gtcctcctgg
     2521 ttggtctgct cgctaccctg gcgttgctat atttcaatcg ctccgggtcc gacccacacg
     2581 ctgcgcggct cgcgtttgtt ccaccgcccg aactcgcttt taacgacacg cagcacgatg
     2641 cggcggtaat ctcgcccgac ggtaagaagg tcgcttttac cgcgacctcg gctgacggga
     2701 agaatatgct ttacgtccgc aatctcgatt tgacggaagt aaaacttcta cccggttcgg
     2761 agaacgcact ggagccattc tggtcgccgg acagccgctc gatagcatac ggctccaagg
     2821 gaaagctcaa gcgctccgat ctaacgggcg cgaacgcgca ggtgttatgc gactcagcgc
     2881 gcctgatcgg tgggacctgg agcaaagacg gcatcatcgt cttcgcgcct gactatcgca
     2941 caacggtgat gcaggtgtcg gcgcagggag gcgagccgaa accggtgaat atgaacttcg
     3001 aaggaaatga cgtagagcgg catcgctttc cctacttctt acccgatggt cgccatttta
     3061 ttttcttccg ggagcagaaa ggcgtttggg caggctcgct ggattcgcct gagatcaaac
     3121 aaattgtggc cgaccgcggg gtggcggcct acgcgcctca gggctggctg atctttttac
     3181 gaaatgacgc gctggtggct caggctttcg acgcgggaaa actcacggtg tccggcgagc
     3241 cgattccaat catcacgggc gaaaagaacc cgcccactgt tcggcgattc tccgtttcgg
     3301 acaatggcat tctggtttgg cagggacagt ggcagcggaa ttatcagctc gtctggtacg
     3361 accgtgaggg gacacagacc ggagcgattg atgcaccgat gaaggctgcc gttggccaga
     3421 gtccctcgct ttcgcctgac gggaaacgcc tgctcgtgag aaggacactg gattcaggcg
     3481 gcggaccaga ctcaaatatt tgggtcgtcg atctcgaaaa gggaacggga ctgcgattaa
     3541 cttcgacgtt tagtcagatg ccggtctggt cgccggacgg aagccgcatt acgtataaca
     3601 ccgggaatgg tgtcgcagtg aaagctgcca atggatcagg tgatgccgag actcttttgc
     3661 cgcgaaccgc gtttaccgcg tcttggtcgc ccgatggtcg tttcattatt ttcatggagc
     3721 ggggcgtgaa gacgcgtctc gatatgtggg tgctgccgct atttggcgac aagaaagaat
     3781 atccgttgtc gaattcgccg tttgacgagc aggatccgca gctttcgccc gacgggcgat
     3841 ggctggctta cacatcagat gaaacgggca actatgaaat ctacgtccag tcattttcgg
     3901 cggacggcaa actaggagcg gacaaaaaac gagtctcgac ggccggcggc agactgcccg
     3961 tgtggcggcg cgacggcagc gaactctttt tcattgcggc cgacggacag atgatggctt
     4021 cgtcagtgaa gaccggcgga acggaattcg ggttcgatgc gcccaagccg cttttcaaaa
     4081 ctcgaacatt gtcgttggag ggcgcaattt ttcgcgaata cgacgttacg ggcgatggtc
     4141 agcgattcct gatcggcacg cggatcggcg acacgaccgt gccaccaccg acggtaatcc
     4201 tgaattggac ggcgttgcta aagaagtgat gatggttttt agatagtcct cggatttgcg
     4261 gaagtgaccc tgattcatga aacgctgcct ccaatgcaat cgcgtcgaga cggacgaagc
     4321 gctgaaaatt gcgcgtcgat ggagcgacgc tgattgccga atctggttca atagatggcg
     4381 aggcggggac ggcgaagttg gccgcggcgg atccggactg aaaagcatct ctactcaatt
     4441 cgacgccgag gctgagcgat tgacgtggtt tttgaacaga acatttagaa aacacaacga
     4501 tggagcttaa ggagatcgcc aaagcagctg agtctctggc cacgcgatat cgcgttaccg
     4561 ggggaaagga attccgtctc aaggacatcc accctgatga cacggctgat ttcagatcac
     4621 acgataagcc acgggcccag gaagctctgg tcgcaggggt cgatgcgctt tgccagctcc
     4681 aggacttgct ctacgcgcag gactgttggg ccgtgctctt gatctttcaa gcaatggacg
     4741 cggcggggaa agacagtgcc attaagcacg tgatgtcggg agtcaatcca caggggtgcc
     4801 aggtggcgtc ctttaaggcg ccgtccgccg aagaactgga tcacgattat ctctggcgct
     4861 gcgtgaaaca ccttcctgag cgtggtcgca taggcgtctt caaccgtagc tactacgaag
     4921 aaaccatcgt ggtccgcgtt catcctgaat ttctcgagtc gcagaaactg ccgcctcagc
     4981 tcttgaccac ggacatttgg gacgaacgtt ttcgcgatat tcgcaacttc gaacgttatc
     5041 taaccagcaa cggcatcgcg gtctgtaaat tctttctcca cgtctcgaaa gccgaacaga
     5101 ggaagcgttt tcttgcacgg atagacgacc ctgcaaaaaa ctggaagttc tctgccaacg
     5161 atgtaaagga aagcgctcat tgggacgagt acatgaaggc ctatgagcag acggtgcgcc
     5221 acaccgccac tgattatgcg ccatggtatg tagtgccagc ggatcacaaa tggtttacca
     5281 ggctggtggt ggcatcggcg gtgatttcga cgctgacttc gttgaaactt gcgtatccaa
     5341 aagtaggcgc ggccaaacag aaagaactaa aagctgcgag acaggcactg acgcgtcgct
     5401 gagttaaggg caagaggcgg gcagacctga atcggtgacc gcaatcgaat caaacgccgc
     5461 cccaattttc acaacgagaa ggagttcgaa tgcgccccag tacattccgt aaccgttcgc
     5521 taatagccgg catcgtcttt tgtttgatcg cgctaaccgc gccaattgtt tttgcgcaag
     5581 agcgtggacc gtcgccggtc ccgccagcga ccccatcgcc aagtccgtcg ccggagccct
     5641 cgcgtgggcc agatcagccg gcgggggaag acgacggtcg tccgcgcgat ccattttcga
     5701 ccgggacctt taacggtttg aggtttcgtt cgattggccc ggcgtttact tccggcagag
     5761 taattggaat tgcagtcgat ccaactaatg cggcgaaata ttacgtggca gctgcctcgg
     5821 gcggcgtctg gaagacagtt aacaatggca cgacctggac gccggtattc gatcgcgagg
     5881 gttcgtactc gattggcgct atcactctgg atccgaagaa cccgctcacg gtctgggtcg
     5941 gcaccggcga gaacaatagc caacgcagtg tctctcacgg aaacgggttg tatcgttcgg
     6001 acgacggtgg ccgctcctgg agaaatgttg gcctgaaggc ctcagaacac atcgggaaga
     6061 tcgccatcga cccaaaagat tccaacatcg tttacgtcgc cgcgcaggga ccgctgtggg
     6121 ggcccggcgg tgatcgagga ctctacaaaa ctaccgacgg cggcaaaagc tggaaacaga
     6181 ttctcaagtt cagcgagcac accggcgtca ccgatgtcgt catcgatcca aacaatcccg
     6241 aaacgattta cgcagcttca tatcaacgac ggcgtcatat gtggacgctg atcaacggcg
     6301 ggccggaaag cgcaattcac aaatcaactg atggcggcgc gacctggacg cgtctgcgcg
     6361 caggcttgcc gactatcgac atgggccgga tagggctagc tgtctcgccg gtcgattcaa
     6421 acgtgattta cgccacgatt gaatcaaccg atcgaaaggg cggcatcttt cgttcgagcg
     6481 accgcggcgg cagttgggaa aggcgcaacg agtttgatac caccgccatg tactacggaa
     6541 agatcttcac cgatccaaag gacgtcgatc ggatctacgt aatgaacgtt tttctgatgg
     6601 tctcagacga cggtgggcgg acgttgcgcc ggctcggcga gcggtccaag cacgttgaca
     6661 atcacgttat ctggatcaat ccagccaata ccgatcacta tttagtggga tgcgacggcg
     6721 gcgtctatga gagttatgat cgcggcacgt tctggcactt caagagcaac ctcccgatta
     6781 cgcagttcta tgacatcacc accgacaacg ccacgccttt ctataacatt tatggcggca
     6841 cgcaggacaa ctacagtttc ggcgggccat cgcgcacgcg cagcgcatcg ggcatcgtga
     6901 attccgattg gattgtgact cagggcggcg atggttttcg cagtcaggtt gatccggaag
     6961 atccgaatac gatttattca gagagccaaa acggcggatt ggtgcgcttc gacaaacgca
     7021 ctggtgagcg cgtcggcatt cagccgcagg aaggccgcgg cgaagatgcg ctgcgttgga
     7081 actgggactc gcccttcatc atcagtccgc attcgcgcac gcgtctctat tttgccgccg
     7141 acaaattgtt tcgcagcgat gaccgggggg acacctggaa gttagtcagc ggccaattgt
     7201 cccgcgatct ggatcgcgac aagctgccgg tcatgggaaa ggtgtggagc atagacgccg
     7261 ttgcgaagaa tgcttcaacg gcccacttcg ggaacgcttc ggcgctggct gagtcgccca
     7321 ggaaggaagg cctgatctat gtcggaacgg acgacggact ggttcagata actgaagatg
     7381 gtgggcggaa ctggcgcaag gttgaaaaga ttggcgacgt accggaactg gcttacgtga
     7441 gccgcatcac tacttcagtt cacgacgcga acaccgtcta tgtcgctttt gagaatcatc
     7501 agaacgccga cttcaagccc tatcttttca aaagcaccga tgcgggcaga acctggacct
     7561 cgatcaagag taacttgccg gccaatcagc ccgtttgggg gatcgctgag gaccatgtga
     7621 actcgaatct gctttttgcc ggaactgagt ttggtctttt ctttaccgtg gacggcggcc
     7681 agaaatggat tcagttacgt ggcggcctgc ccacgattca ggtgcgcgac atcgtgattc
     7741 agcgacgcga aaacgatctc gtgctgggaa cattcggacg cggcatctac atccttgata
     7801 actacac
//
LOCUS       DATDBY010000612         2792 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_893062, whole genome shotgun sequence.
ACCESSION   DATDBY010000612 DATDBY010000000
VERSION     DATDBY010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_893062"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1667)
                     /locus_tag="VIT19_11460"
     CDS             complement(<1..1667)
                     /locus_tag="VIT19_11460"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5839644.1"
                     /translation="MFRSLRRRRSPLIVCELMLAAALILSFIPASASVTSFQSNQSLR
                     FELPSNGNLRVENLRGVVIAEVWSEPYVSIAAVTDTGEAIRSPAVIESSDRLLSVRVP
                     RSAAKAHVNLELRIPARTHAAIFTGNGSVEVRGLPSALLIQTVSGEIRVDVPNSANAT
                     LVAESRTGNVSSSVPSAAASQSQRPQLRARLGKGSGAVRLFSQAGNIVLGAQTQAADV
                     PARTQTIAPERRETLSVPAATPPVDRPQLIGAGEQKPGAGTPARPSSTPEEVSEDDVI
                     RVDTELVSVNVSVVDRGTNRGVNNLSKGDFRLYEDNVAQELLHFESSSAPFNLVLLID
                     LSGSTAKVVELIKSAASHFVDAARPFDRIGVITFAGDQAVVSPLTTDRAVLHQRINEI
                     RRPDGSTKLYDSLSFAMNEVFRQAKDSRRNAIVVISDGLDSLMPNVTGEGSRLTYQEV
                     LRQAREFDGVIYTIWTDTQSYEPLSPGDIQQVTFDRAHDQMKEIADEGGGAFYECLKL
                     EDLAGSYDRVVADLGTLYTLSYRPTNKVRDGSWRAIRVTVSRPGAVAR"
     gene            complement(1695..>2792)
                     /locus_tag="VIT19_11465"
     CDS             complement(1695..>2792)
                     /locus_tag="VIT19_11465"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEY5839645.1"
                     /translation="LIFSPGRPPQVELVGKLQPVDIPGLDKLSAPQTAGIAKIIIGAH
                     EEAAQSLEKYGSADLSFSVPSLCRFRVNIFKQRGTHAIVMRVIPSRPPNFADFNLPPQ
                     MRDIVEIKNGIVLVTGPTGSGKSSTLAAVIDLINETKYYHIVTIEDPIEFLHTHKNST
                     IHQRELHSDTPNFALALRAALRQAPKVILVGEMRDRETIEVAMEAAETGHLVLSTLHT
                     IDSAKTVERIIGVFPKNEEQIIRTRLAQSFRYIISQRLLPRADGSGRVAAIEILKATS
                     RTREYIERGETEGKSLLDAMEQGEVEGMQTFDSVIEEMIRAGTVTKEDGLAYASNYGN
                     LLLRLSDLGEGGDAKKEAETAVPSMLDMIEP"
BASE COUNT          568 a          811 c          809 g          604 t
ORIGIN      
        1 cgagcgactg cccccgggcg gcttacggtc acccgaatcg cgcgccacga accgtcacga
       61 actttgttgg ttggccggta tgaaagtgtg taaagcgtcc ccaaatccgc gaccactcga
      121 tcgtacgagc ctgcgagatc ctccaacttc aaacattcgt agaacgcgcc gccgccctcg
      181 tcagcgattt ccttcatttg gtcgtgggcg cggtcgaacg taacttgttg aatgtcgccg
      241 ggactcagcg gctcgtagct ttgcgtgtca gtccaaattg tatagatgac gccgtcaaac
      301 tcacgcgcct gccgcaaaac ttcttgataa gtaagtcgcg aaccttcgcc cgtcacgttt
      361 ggcataaggc tgtccagccc gtcgctgatc acgacgatcg cgttgcgccg cgagtctttc
      421 gcctgccgaa acacctcgtt catggcaaac gagagcgaat cgtagagttt cgtactaccg
      481 tcgggccgcc tgatctcgtt aatccgttga tgcagcaccg cacgatccgt cgtcagcggc
      541 gacacgaccg cctgatcccc ggcaaatgtg attacgccaa tgcgatcaaa aggacgcgcc
      601 gcgtcaacga agtgggaagc agccgatttg atcagctcaa cgaccttcgc ggtcgaacct
      661 gaaagatcga tgagcagaac caggttgaag ggcgccgaag aagactcaaa atgtaggagc
      721 tcttgcgcga cgttatcttc gtacagacga aagtcacctt tgctcaggtt gttgactccg
      781 cggttcgtac cgcgatcgac gacgctcacg ttgacgctaa ccaattcagt atccactcga
      841 atcacgtcgt cttctgaaac ttcttccgga gttgaggagg ggcgcgccgg agttcctgcg
      901 cccggttttt gctcacccgc gccgattagc tgtgggcgat ccaccggcgg cgtcgcagcc
      961 ggcacagata aggtctcgcg ccgttcgggt gcgatagttt gcgtgcgcgc cggcacgtcg
     1021 gcggcctgcg tctgcgcgcc aagaacgatg ttgcccgctt gcgagaacaa gcgaacagcg
     1081 ccgcttccct tgcctaaacg cgcgcgcaac tgtggccttt gggactggga agccgcagcg
     1141 ctcggcactg aagaagaaac gttccccgtt cgcgattctg cgaccagcgt tgcgttcgcc
     1201 gagttcggga cgtcaacgcg aatctcgccg gagacagttt gaattagcaa agctgaaggc
     1261 agcccgcgca cttccactga accgttgccc gtgaagatcg cagcgtgagt ccgcgctgga
     1321 attcgcagct caagattgac gtgcgctttt gccgcgcttc taggcactcg aactgagagc
     1381 agcctgtccg atgactcgat gacggccggt gagcgaatcg cttcgccggt atcggtgacg
     1441 gccgcgatcg aaacgtatgg ctcgctccac acttcagcaa tcacaactcc gcgcaaattt
     1501 tcgacgcgca gatttccgtt actcggcagc tcgaagcgca gactttgatt tgactgaaat
     1561 gatgtgactg aagctgaggc ggggataaag ctgagaatga gcgccgctgc gagcatcaac
     1621 tcacagacga tcagtggaga gcgacgacgt cgtaaacttc ggaacatctg acttgtcgct
     1681 tacagaaccg ccccttacgg ttcgatcata tccagcatcg atggaacggc agtttcagcc
     1741 tctttttttg cgtcaccgcc ctcgcccaag tcggacaggc gcagtagcag gttgccgtaa
     1801 ttcgacgcgt atgcgagtcc atcttctttg gtcaccgtgc cggcgcgaat catttcttca
     1861 atcacgctgt cgaaggtctg catgccttca acctcgcctt gctccatcgc gtccagcagc
     1921 gatttgccct cggtctcgcc gcgttcgatg tattcgcgcg tgcgtgacgt tgctttgaga
     1981 atctcaatcg cggccacccg gccgctgcca tcggccctgg gtaaaaggcg ctgcgagatg
     2041 atgtaacgga aagactgcgc cagccgtgtg cggatgattt gttcttcgtt cttgggaaaa
     2101 acaccgatga tgcgctcgac ggttttcgca gagtcgatgg tgtgcaatgt agaaagcacc
     2161 aggtggcctg tctcggcggc ttccatggcg acttcaatgg tttcgcggtc gcgcatctcg
     2221 ccgacgagga ttactttcgg ggcctgccgc agggcggcgc gcagggccaa cgcaaaattg
     2281 ggcgtgtccg aatgcaactc gcgctggtga atcgtagagt tcttgtgcgt gtgcaaaaac
     2341 tcaatcgggt cctcgatcgt gacgatgtgg tagtacttcg tctcgttaat gagatcaatg
     2401 actgcggcga gcgtcgagct cttaccgctg cccgtggggc cagtcacgag cacgataccg
     2461 ttcttgatct cgacgatgtc gcgcatctgc gggggcaagt tgaaatccgc gaagttcggc
     2521 ggccgcgacg gaattacgcg catcacgatc gcgtgggtgc cgcgctgctt gaagatgttc
     2581 acgcgaaagc ggcagagact cggcacgctg aatgaaagat ctgcggaccc atatttctct
     2641 aaactttggg cagcttcttc atgagcaccg atgattattt tcgcgatgcc tgcggtctgc
     2701 ggcgcggaaa gtttgtccag cccgggaatg tccaccggtt gaagcttgcc gaccagttca
     2761 acttgcggcg ggcggccggg cgagaagatc ag
//
LOCUS       DATDBY010000613         2576 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1707851, whole genome shotgun sequence.
ACCESSION   DATDBY010000613 DATDBY010000000
VERSION     DATDBY010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1707851"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..463
                     /locus_tag="VIT19_11470"
     CDS             <1..463
                     /locus_tag="VIT19_11470"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEY5839646.1"
                     /translation="SGNCIVAKHLKPNVQVIAVQSEAAPAMWHAWKNRSLDEYPTMKT
                     EHEGLATRVPFEMPSRILWELLDDFLLVTDDEINEAIGLLAVNAKQIAEGAGAASLAG
                     AIKLRDQGRSSGPTGRDGLRGKKVVGILTGGNIPPEKFASLMKVSSARLAR"
     gene            complement(760..1542)
                     /locus_tag="VIT19_11475"
     CDS             complement(760..1542)
                     /locus_tag="VIT19_11475"
                     /inference="COORDINATES: protein motif:HMM:NF015891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretin N-terminal domain-containing protein"
                     /protein_id="HEY5839647.1"
                     /translation="MKTLKHLPVALALLLSIGSVSFAQQPTSTPRPEPDYVTDKGFKS
                     RIFDVKYRDATSLANVLRSLGSGFKGATVQSNSEFKTITVRDFPENIVTMEEAIKRLD
                     TPATPRPNIELHMHVLIASNTGGGSSDMPAELRDVLTQLRGTLTYRNYELAASVVQRI
                     TTTERMLQGAGTAEVSSGAAGAANISMPYEYQLYNVSVVENAVGAPSVRINDFAFSAV
                     TDKDRPRVQTALNLRDGEKVVVGTASIRNRALVIVLTATLVK"
     gene            complement(1587..2282)
                     /locus_tag="VIT19_11480"
     CDS             complement(1587..2282)
                     /locus_tag="VIT19_11480"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEY5839648.1"
                     /translation="MNCKQLDELLPLYAGHDLDEKRARLVSEHVQICSACARVAGEYQ
                     DAVELAPHFAPPVFSDNVYASVRRQVMQQIEDEPTAPLLPQMFASWFRPRLTWAVASA
                     LIIAFGFFALYLVVNRGAEVRPVADNHPTVTEQPRSIATPSTITAAGSGITGTPPKDQ
                     RRSIRSFGNRSPLVAAKARNLSSAAASVSPKLRDPEAGDNLPSEDAVADKSPLRVEMQ
                     TKDPNIRIIWFLN"
     gene            complement(2279..>2576)
                     /locus_tag="VIT19_11485"
     CDS             complement(2279..>2576)
                     /locus_tag="VIT19_11485"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEY5839649.1"
                     /translation="FGEDGGEAYEVADEHADAEQVLVQTQQHELIGKAMGTLPFKERA
                     SIVLRDVEGLSTDEVARIMKSSATTVRSQISSARKKIRIYCQQHRAGFGEGKAR"
BASE COUNT          555 a          724 c          732 g          565 t
ORIGIN      
        1 gtcggggaac tgcatcgtgg caaaacatct gaagccgaac gtgcaagtga tcgccgttca
       61 atccgaagcc gcgcccgcga tgtggcatgc ctggaagaac cgctcgctcg acgaatatcc
      121 gacgatgaag actgagcacg agggactcgc cacacgcgtt ccgtttgaaa tgccgagccg
      181 gattttgtgg gagctgttag acgactttct gctggttacc gatgacgaga tcaacgaggc
      241 gattggactg ctcgcggtta acgcgaaaca gattgctgaa ggcgcgggcg ccgcgtccct
      301 ggcaggcgca atcaagctgc gcgatcaagg gcgcagcagt ggcccgacgg ggagggatgg
      361 cttaaggggc aagaaagttg tcgggattct gaccggcggt aacattcctc cggagaagtt
      421 tgcttctcta atgaaggtca gcagcgcccg cctagcaaga tgagccacag cgcgctgaaa
      481 agaaaccaag gatccattcg accgcaatca aggacgaaaa aatgtagccc aacctcgatg
      541 tatcggggtt gcggagcgca agttaacaac ttgcgatacg agcgccgccg cgcgccgtta
      601 ggcgcgtaat gtttatagtt ctcgcgaccc ctaaatgtta cgccggcaga agcgagcaac
      661 ctcgcttctg ccggcgtagt tatcaaacaa gccatcgaga gctctaaata tttggctctt
      721 gccggagcca tgacttaagc gacgttagct ccgctctttt tacttcacca aagtcgccgt
      781 cagcacgatg actaaagcgc ggttccgaat agatgccgtg ccgacgacga ctttctcgcc
      841 atcgcgcagg ttgagcgccg tttgaacgcg aggacggtct ttgtcggtga cggctgagaa
      901 tgcaaagtca ttgattcgca cgctgggcgc acctactgca ttttccacta cggaaacgtt
      961 gtagagttga tactcgtagg gcatcgagat gttggcagcg ccggcggctc cgctcgaaac
     1021 ctcagccgta cccgcaccct gcagcatgcg ttcggttgtg gtgatacgct gcacaacgga
     1081 cgcggccaat tcgtaattac ggtaagtaag cgtgccgcgt aactgagtaa ggacgtcccg
     1141 caattcagca ggcatgtcgc tactgccgcc gccggtgttc gacgcgatca gcacgtgcat
     1201 atgcagttcg atatttggcc gtggcgtggc gggcgtgtcc aaccgcttga tcgcctcttc
     1261 catcgtcacg atgttctcgg ggaaatcacg tacggtgatg gtcttgaatt cggagttgga
     1321 ctgcacggtg gcgcccttaa agccactccc caggcttcgc agcacattgg ctagacttgt
     1381 cgcatcccga tacttaacgt cgaaaattcg gctcttgaag cctttatcag tgacgtaatc
     1441 cggctcaggc ctcggcgttg aagtcggctg ctgagcaaat gataccgagc caatggatag
     1501 taagagcgcc agggccactg gcaggtgttt taaagttttc atgaagaaac ctcctagata
     1561 cctttcgatg tttggtaatg cttgtttcag ttgagaaacc agatgatgcg aatgttcgga
     1621 tccttcgttt gcatttcgac gcgcagaggt gatttgtctg cgaccgcatc ttcagacggc
     1681 aaattgtccc ccgcctcagg gtcgcgcagc tttggcgaaa cactcgccgc ggccgacgat
     1741 aaatttcgcg ctttcgccgc gacgagcggc gatcgattcc caaagctgcg gatggatctg
     1801 cgctggtctt tcggaggcgt tcccgtgatt cctgagccgg cggcggttat tgtcgacgga
     1861 gtggcgatcg accgaggctg ttcagttacc gtcggatgat tgtctgcaac cggccgaact
     1921 tcagcacctc gattgacgac taaatacagg gcaaagaaac caaaagcgat tattagcgca
     1981 ctggcgactg cccaagtcag gcgcgggcgg aaccaactgg caaacatctg cggcagcagc
     2041 ggcgccgttg gttcatcttc aatctgctgc atcacttgcc ggcgcacact tgcatacaca
     2101 ttgtcggaga agacgggcgg cgcaaaatgt ggcgccaact caaccgcgtc ctggtactcg
     2161 ccggcgacgc gcgcgcaagc tgaacagatt tggacatgct cgctcaccag ccgcgcgcgt
     2221 ttttcatcga ggtcgtgtcc cgcgtacagc ggcagtaatt catcaagctg cttgcaattc
     2281 atcgcgcctt cccctcgccg aatcccgctc tgtgctgctg acaatagatt ctgatcttct
     2341 tgcgtgcgga actaatctgc gagcgcacgg tcgtcgcact cgacttcata atgcgtgcga
     2401 cttcgtcggt tgaaagccct tcgacgtccc gcaaaacgat cgacgcgcgc tctttgaaag
     2461 gcagcgtgcc catcgccttc ccgatcaact cgtgttgttg agtctggaca agcacttgtt
     2521 cggcatcggc gtgttcgtca gcaacttcgt aggcctctcc tccgtcttcg ccgaac
//
LOCUS       DATDBY010000614         2319 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_419328, whole genome shotgun sequence.
ACCESSION   DATDBY010000614 DATDBY010000000
VERSION     DATDBY010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419328"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            72..953
                     /gene="mutM"
                     /locus_tag="VIT19_11490"
     CDS             72..953
                     /gene="mutM"
                     /locus_tag="VIT19_11490"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: protein motif:HMM:NF002211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HEY5839650.1"
                     /translation="MPELPEVEHVVRALRRAIVRRRILATEIRLPKLVPRSAQAAFNR
                     KLKGSRVCGVRRRGKFILIDLDKPKMLSHGRAVGTRPGSGSVLIFHLRMTGKFRYLTV
                     DEELPRYAHAIFYLDNERRLVFCDQRQFGVMKLVAYSRLARTKGIRELAPEPFSDDFS
                     LDYLKKTLSRSQRSLKTLLLDQTRVLGLGNIYASEALFRAQINPFKIAATLAPKRVAR
                     LHQAIREVLADALSDGTRLRVNLEHPDGFTYGEAFEDFWHVYDREGEPCVRCGAKVRR
                     ETHGGRSTYWCPRCQRR"
     gene            complement(957..1385)
                     /locus_tag="VIT19_11495"
     CDS             complement(957..1385)
                     /locus_tag="VIT19_11495"
                     /inference="COORDINATES: protein motif:HMM:TIGR02241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEY5839651.1"
                     /translation="MAARNDPYKNFKFRVEISGITSAGFSECTGLSTEVDCVEYREGG
                     DFVSRKLPGRSKYANITLKRGVTKSAELQDWHKNILNGVADRRDGFVILLDDDLTPVV
                     RWKFFNAFPRKWDGPDLNAKGNEVAIESLELCCERIERDT"
     gene            complement(1401..1844)
                     /locus_tag="VIT19_11500"
     CDS             complement(1401..1844)
                     /locus_tag="VIT19_11500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839652.1"
                     /translation="MAKRPSDVSQPTAPTGQSVGRPDVILEFLFDRGMLLLALRNIGQ
                     RPAIATSVKFDKKIVGLGGLKDISTLPVFQQVEFLGPGREIVVFVDQSHSYFARKQPT
                     KISARISYSDSEKRKYDATINHDLEIYRELPYLTLEHHCNNPAED"
     gene            complement(1991..2257)
                     /locus_tag="VIT19_11505"
     CDS             complement(1991..2257)
                     /locus_tag="VIT19_11505"
                     /inference="COORDINATES: protein motif:HMM:NF025392.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HEY5839653.1"
                     /translation="MPVYMVERELPGIQMDQLAAAQKAAIETSNQFTAEGKPVRYIRT
                     TFVPGEAHCMCLFEAGNADDVKAVNEKANIPFTRVVEALDLTPQ"
BASE COUNT          515 a          653 c          601 g          550 t
ORIGIN      
        1 tcgctttaga aacaatttaa tgcacctttt ccgctttgac ttcggcggca gggcatccca
       61 cactctcggg catgcccgag ctgccggagg tcgagcacgt cgtgcgcgcg ctgcgccggg
      121 ccatcgttcg ccgccgcata ctcgccacag agatacgcct gccaaagctc gttccgcgtt
      181 cagcccaggc ggccttcaat cgcaaactaa agggttctcg cgtctgcggc gtgcggcgcc
      241 gcggcaaatt catcctgatc gatctcgaca agccgaaaat gctctcgcat ggtcgcgccg
      301 tcggcactcg tcccggctca ggcagcgttt tgatcttcca cctgcgcatg accggcaaat
      361 ttcggtatct caccgtcgat gaggagctgc cacgttacgc acacgcaatc ttttacctgg
      421 ataacgagcg gcgccttgtg ttctgcgatc agcgtcagtt tggagtaatg aaactggttg
      481 cgtattcgcg actggcgcgc accaaaggca ttcgcgaact cgctcccgaa cctttctcag
      541 atgatttcag tttggattat ctgaagaaga ctttgtcgcg atcgcaacga agtctgaaga
      601 cgctgctgct cgatcaaaca agggtacttg ggctgggaaa catctatgcg tccgaagcgc
      661 tctttcgcgc gcaaattaac ccgttcaaga ttgcggcaac gctggctccg aaacgcgtcg
      721 ctcgactgca tcaggctatt cgcgaggttc ttgccgacgc gctgagtgac ggaacacgac
      781 tgcgggtgaa cctcgagcat ccggacggct ttacgtacgg tgaagcgttc gaagatttct
      841 ggcatgtcta cgatcgagaa ggcgagccct gcgtcagatg cggcgcaaag gttagacgcg
      901 aaacgcatgg tgggagatca acttactggt gtccgcgttg tcagagaaga tagcttttac
      961 gtatcccgtt cgatccgttc acaacaaagc tcaaggcttt caatcgccac ttcgttgccc
     1021 ttcgcattga gatcagggcc gtcccatttt cgggggaacg cattaaaaaa cttccaacgc
     1081 accaccggcg tcaggtcgtc atcgagcaga atcacgaagc catccctgcg gtcggcgacg
     1141 ccgttcagaa tgtttttgtg ccagtcttgc aattctgcgg actttgtcac tccgcgtttt
     1201 agcgtgatgt tcgcgtactt cgagcgtccg ggaagtttac gcgaaacaaa atcgccacct
     1261 tcgcgatact caacacaatc aacctcggtg ctcagtcccg tgcattctga aaaacccgcg
     1321 ctcgtgattc cactgatctc aacgcggaac ttgaagttct tatagggatc gtttcgagcc
     1381 gccattattt cggcctcctc tcagtcttct gccgggttat tgcagtgatg ttcgagcgtc
     1441 aggtaaggca actctcggta aatttcgagg tcgtgattga tggtcgcgtc gtatttccgt
     1501 ttctcagaat cagaataaga aatgcgagcg gaaattttag tcggctgctt ccgcgcaaag
     1561 taagaatggc tctggtcaac gaaaacaacg atctcacggc cagggccgag gaattcgacc
     1621 tgctgaaaaa ctggcagcgt cgaaatgtct ttcagcccgc cgaggccgac gattttcttg
     1681 tcgaatttta ccgaggttgc aatggccgga cgttgaccta tgtttctcag cgccaggagc
     1741 aacattccgc gatcgaaaag aaattcaagg atgacatccg gccggccaac actttgaccg
     1801 gtcggggccg ttggttgaga aacatctgaa ggacgttttg ccatctggct ccgattttag
     1861 ttctcacccg gacccggtga aaactcatgc tttgactctg ccacccggct gaagccgcgt
     1921 gtgaatcaga agctcgcggc atagtccacc gcgcaaaggt gttcccacga tctgtgtcag
     1981 taaatggccg tcactgcggc gttaaatcca gagcttcaac tacgcgggtg aacggaatgt
     2041 ttgccttttc gttgacggcc ttgacgtcgt ccgcattgcc tgcctcaaac aaacacatgc
     2101 aatgtgcttc acccggaaca aacgtcgttc ggatgtagcg gacgggttta ccctcagcgg
     2161 taaactggtt gctggtttca atcgctgctt tctgcgccgc ggccaattga tccatctgga
     2221 tgccgggcaa ttcgcgctca accatataaa caggcattct caagccctcc tcatgtaatg
     2281 aagtcctaca aattcgccaa aacaaaatca gtcatcatc
//
LOCUS       DATDBY010000615         2112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1289867, whole genome shotgun sequence.
ACCESSION   DATDBY010000615 DATDBY010000000
VERSION     DATDBY010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1289867"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..572)
                     /locus_tag="VIT19_11510"
     CDS             complement(<1..572)
                     /locus_tag="VIT19_11510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839654.1"
                     /translation="MSNSLAVINCSQLVTLAGAHRPRTGGDLRQLAIIEDGAMFIRGD
                     RIEAVGRRREIEVLVDSECEVIDAGRRVVLPGFVDAHTHPVFGGNRANEFEQRTAGAT
                     YREIARGGGGIRASVRATRNASLNDLVKAGKRYAEWFLRCGTTTVEAKSGYGLTLEDE
                     LKILRAIRQLDEGTPLNYVPTFLGAHDIPF"
     gene            complement(588..1007)
                     /locus_tag="VIT19_11515"
     CDS             complement(588..1007)
                     /locus_tag="VIT19_11515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839655.1"
                     /translation="MNINIGRVLLGGLVTGIILNAGEVVLHDILLGAQTKAFFAEHNF
                     SDPGPSFMIAAVGGTLALGIVIVFGYAAIRPRFGAGPKTAIIAALFAWFGIYLYTGIL
                     HGLMFGMAVNSMLITIGWGLVVYILATLAGAALYKEK"
     gene            complement(1171..1587)
                     /locus_tag="VIT19_11520"
     CDS             complement(1171..1587)
                     /locus_tag="VIT19_11520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839656.1"
                     /translation="MNYGRVVLGGLVAGLILNIGEFVLNGVLLHKAMVEWASLHNFPA
                     EPAPSFMVVAIGLTFVLGIVMVWLYALIRPRMGPGPKTAIVAALVMWFGVCLYCGIIY
                     GLLLQQPTNLLLIAMGWCLGEYVIAAIAGAWLYKEV"
     gene            complement(1705..>2112)
                     /locus_tag="VIT19_11525"
     CDS             complement(1705..>2112)
                     /locus_tag="VIT19_11525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839657.1"
                     /translation="VNSILFVGVITLAFSLIPLIGVLEEEAFQIQDNAATMFYALIYV
                     VLFAIPFVAIRRFGAKAPLWLKIASASGLIVSLIAGFYSMFPIKAVAQPRAFALKVFA
                     VVLVANVVGVVLYTVRGKRSSKTSAGVSPSAGK"
BASE COUNT          513 a          612 c          565 g          422 t
ORIGIN      
        1 tcaaaaggga tgtcgtgggc gccgagaaaa gtgggaacgt aattgagcgg ggtaccttcg
       61 tcaagctgcc taatcgcacg caggattttc agctcgtctt ccagcgtcag gccatagccg
      121 gatttcgcct cgacggtcgt cgtgccgcac cgcagaaacc attcagcgta acgcttaccg
      181 gctttcacca ggtcattaag cgaagcatta cgtgtcgcgc ggacggatgc gcgaatgccg
      241 ccaccgccgc gcgcaatttc tcgataggtc gcgcccgctg ttctttgttc gaattcgttc
      301 gcgcggttcc cgccaaagac cggatgcgtg tgggcatcga caaagccggg cagcacaacg
      361 cgacggccgg cgtcaattac ttcgcattct gaatcaacga gaacttctat ttcgcgacgg
      421 cgtccgacgg cttcgatccg atcgccgcgt atgaacatcg cgccgtcttc aatgatcgca
      481 agctgccgca gatcgccgcc cgtgcgaggc cggtgggcgc cggcaagggt aacgagctgt
      541 gagcaattaa ttacggcaag tgagtttgac aagtctggac gtgcttttca cttttctttg
      601 tagagagccg ctccggccaa cgttgcgaga atgtacacaa ccaggcccca gccgatcgtt
      661 atcagcatcg agttcacggc catcccaaac atgagtccat gtaggattcc cgtatacaag
      721 tagatgccga accacgcgaa cagagcggcg atgattgcgg ttttgggacc ggcgccgaac
      781 ctcggcctga tcgccgcata tccgaacacg atgacgattc ccaacgccag agttcctccg
      841 accgccgcga tcataaaact gggcccgggg tcgctaaaat tgtgctcggc aaagaacgcc
      901 ttcgtctggg cgcccaaaag gatatcgtgc agaacaactt ctccggcgtt caaaattatt
      961 ccggtcacga gaccgccgag cagaacgcgt ccaatgttaa tgttcattgt tcctcctggg
     1021 ttcaacgtta gtcggtttcg aatggcgcgc cgatcgcgat ttcaagagga tcgcgcgagt
     1081 gctactccaa actggccggc gtgcgcccgc aagggtaacg agctgtgcgc aattaaatac
     1141 cgcgagtgag ttcggcaacc ctgaagtccg tcacacttcc ttgtacagcc acgcaccggc
     1201 aatcgccgcg atcacgtatt cccccaggca ccaccccatc gcgatgagca acaaattagt
     1261 tggctgctgg agcagtagtc catagatgat gccgcaatag aggcagacgc cgaaccacat
     1321 caccagcgct gcgacaattg cggtcttagg tccgggtccc atgcgcggac ggatgagggc
     1381 atagagccaa accataacga ttcccaacac gaacgtgaga ccgatcgcca ctaccatgaa
     1441 tgaaggggca ggttccgcag ggaagttgtg gagacttgcc cattcaacca tcgccttgtg
     1501 taaaagcact ccattcagga cgaactcacc gatattcagg atgagtccag ctaccaaacc
     1561 accaagaacc acgcgtccat aattcatctt tgttctccta tcggggtaaa gagtactgaa
     1621 gtgtccgctt gcgggcgcgt tctatcacaa cggcagagcg aaaaccagcg ttagttctaa
     1681 tcggtagatt gcgttgtaat tgggctattt cccggccgat ggagacactc cagctgacgt
     1741 ctttgaagag cgtttgccgc gcacggtgta taggacaacg ccgacgacgt tggcgaccaa
     1801 gaccaccgcg aacaccttca aagcgaatgc gcgcggctgg gccacggctt tgatcggaaa
     1861 cattgagtag aaccccgcga tcagcgagac gatcaaaccc gaagctgatg ctatcttcag
     1921 ccacagcggc gccttcgcgc cgaatcgtcg aatcgctacg aaaggaatcg cgaaaagcac
     1981 gacgtaaatc aacgcgtaga acatcgtcgc ggcgttgtcc tgaatttgga aagcctcctc
     2041 ttccagtact ccgatcagcg gtatcagact gaaagctaaa gtaatcacgc ctacaaacaa
     2101 gatggaattc ac
//
LOCUS       DATDBY010000616         5090 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_272872, whole genome shotgun sequence.
ACCESSION   DATDBY010000616 DATDBY010000000
VERSION     DATDBY010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5090
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272872"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(563..2263)
                     /locus_tag="VIT19_11530"
     CDS             complement(563..2263)
                     /locus_tag="VIT19_11530"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY5839658.1"
                     /translation="MPQSIHSFDRINIPAPCDADWDSMTGNDRVRFCEHCKLDVTNLS
                     ALTRPEAMRLVERSRGRLCVRFVTRANGRVLTKQLPRKVHQIARRASRIAAGAFSATL
                     SLSSAATQAQPGYGFESGRQTPVATAVASPSAHEAALAGTVTDPNGAVIMGASVILSR
                     KGTGAAFVHVTGDDGSYNFWLLEPGRYTLNVDAASFAPTQFEFELPAASTKTLDVTVQ
                     VPEVIEEVQVRLQTTELVVMGGIRISQPENLLIKAAFNDDVAALVELIPGTTDINASD
                     TVTGTSALAYAIANSNLNLVNILISAGASPNSVNREGETPLMRLRSDAPVEFVHKLIE
                     LGFDVKARDNSGRSVLMSLARSSNLAVVKELIDAGAKIDERDNNGLTVLMSAAENPDV
                     NILKLLIKAGAPLNQSDDDGASALLIAAREGRGENLRVLIDAGAAVDLGQSDLNAALV
                     LTARHGDASTLKFLLKLGANANSKDDRTTALMFAAEDGTPEMVKALIDEGANVDAVDE
                     NGWTALMHADEAETVQVLLNAGANMAIKNNDGDTVLAMANRYKQEAVVQLLKSRGAPE
                     "
     gene            complement(2445..>5090)
                     /locus_tag="VIT19_11535"
     CDS             complement(2445..>5090)
                     /locus_tag="VIT19_11535"
                     /inference="COORDINATES: protein motif:HMM:NF019298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
                     /protein_id="HEY5839659.1"
                     /translation="SAPQPQQPGVILPGSTGAITGTVTDPQGAVIVGTKVTAKNLRNS
                     IERTAETNENGFYLIKNLSAGTYEVIFDAPAFNRAVVTNVVVRSSNVTQLNVTLDVGA
                     VSETVNVTAGASGLVDMTTSQSSRASRFVLDGVNVVTKPGTAGQQLSTPRLREYFPET
                     LVWQPSLETDKQGRAQLQFKLADNITTWKMSVIGSTEDGQVGVVEREIKSFQPFFVDH
                     DPPRVLTEGDEIFLPVVVRNYLDRAQTVDLEIKPEGWFTLLGAATKKVDVAAGDAMRS
                     TFDFRASASVVDGKQRITAMASDANDAIEKPVTVHPDGEEKSVTTSDIVSNQATLTLD
                     IPATAIPNSAKAELKIYPNLLAHVTESVEAIMARPYGCGEQTISSTYPSLLWLKNYKR
                     IGAPAGGADVHKKATRYLRAGYARLLNYRDEGGGFTYWGRGEPDLALTAYALRFLTEA
                     SELIEVDDHVIKDARNWLIKQQRADGSWAAYTYGNKTEDQRRTAMLTAFVARVLAMTA
                     ETAKIDGTSNKTTQQPFKVVGPELKRALDYLEQRTGEIDEPYLLASYALASLQVADIR
                     AAKAIARLRALALEENGANYWSLETNTPFYGWGRAGRVETTALVVQALTVAQVGNLRD
                     SDQLIDRGLLFLLREKDRYGVWYSTQATINVLDTLLALLARDVNAPDASRIAQIVVNG
                     RAVKSIELPVANQLVSPISVDLSSFIQAGINRVDIKRAPGSSPASAQAVATYYLPWRE
                     SVATQEANWRANGASGLRLVTKFDKTSAQVTDEIDCRVEAERIGLRGYGMMLAEIGLP
                     PGSDVDRASLETAMKGSDWSISQYDVLPDRVILYLWPRAGGTKFNFKFKPRFGMNAQS
                     AASIVYDYYNPEARAIVAPVRFVVK"
BASE COUNT         1045 a         1512 c         1393 g         1140 t
ORIGIN      
        1 cgcccagaga cccgtcgttc tacttcaact tttcgcttac ctacctgatg gtcggagata
       61 cgaaaaaagc gcaggagcag caacagaaac ttcgcgctct ggatccggcg atggccgagc
      121 acctcgcggt catgatcgcc agacgtccgc ggtaaagggt gcccctttca aatctttgca
      181 ccctccctaa cggtcgggtt tctgccacat ctcttcagct agaaatttcc gccacaagct
      241 tcgtgaccgc aatcgcaatc gagttcgatt gtgtcgccgg tgccttcaca cgatgcgctg
      301 caatatttgc tgtcctcgga tcgtggacac gaacacggcg ggttcttaca agtgttatcg
      361 tcagccatga tttctcccct gagatctaat gatgattttg gtttggaacg aggcgcaaag
      421 cttaacacat ccggccaatt caacccgaac gagattgccg caaagcgcgc gagggagagt
      481 gtcggaagcc cgacttgccg gcgaggacac tataagaggg catcaacctg gccaaagcca
      541 ggcttccgac acctggcggg cctcactccg gcgcaccgcg agacttcaga agttggacca
      601 ccgcttcctg tttatatcta ttagccatcg ccaggaccgt atctccgtca ttgttcttga
      661 tggccatgtt cgcgccggcg ttcagtaaga cctgcacagt ctcagcctcg tccgcgtgca
      721 tcagcgcggt ccaaccgttc tcgtccacag cgtcaacatt cgcgccttcg tcaattaatg
      781 ctttgaccat ttctggcgtg ccatcttcag cggcaaacat caacgcggtt gtgcggtcat
      841 ctttcgagtt cgcgttcgct ccaagtttca gcaaaaactt gagcgtgctc gcatcaccgt
      901 gccgggcagt aaggaccaat gctgcattca gatcgctctg acccaaatca accgcggcgc
      961 ctgcatcgat caggacccgc aggttctcgc cccggccttc acgcgccgca atcaacaatg
     1021 ccgatgcgcc gtcatcgtcg ctttgattga gcggcgcacc cgccttgatt aagagcttca
     1081 ggatgtttac gtcgggattt tccgccgcgc tcatcaagac ggtaaggccg ttgttatctc
     1141 gctcgtcgat cttcgcgccg gcgtcaatca gttccttcac gaccgcgaga ttactggagc
     1201 gggccaggct catgagtaca ctacggccgg aattgtcgcg agctttaaca tcgaagccca
     1261 actcgatcag cttgtggacg aactcaaccg gagcatcgct tcgcaaacgc atcagcggcg
     1321 tttcaccttc ccggttcacg ctgttcggac tggcacccgc ggaaatcaga atgttcacca
     1381 gattgaggtt gctattcgcg atcgcatacg cgagtgcgct ggtgcctgtc accgtgtcac
     1441 ttgcgttaat gtcagtcgtg cctggaatta gttcgacaag tgccgccaca tcatcattga
     1501 aggcagcttt aattaagaga ttttccggtt ggcttatgcg gattcctccc atcacgacga
     1561 gttctgtcgt ttgcagacga acctgcactt cttcaatcac ttccggaacc tggaccgtga
     1621 cgtccagcgt cttcgttgaa gcggcgggca actcaaactc aaattgggtg ggagcaaaac
     1681 ttgccgcgtc aacattcaac gtgtaacgcc cgggttcgag cagccagaag ttgtacgaac
     1741 catcgtcgcc ggtcacgtga acgaacgccg cgccggttcc tttcctggag agaatcacgc
     1801 tggcgcccat gattacggct ccgtttggat cggtgacggt gccggcaagg gcagcttcgt
     1861 gcgcgctcgg tgaagcgacg gccgtggcca cgggtgtttg gcgtccactc tcgaagccgt
     1921 atcccggctg tgcctgcgtg gcggcgctcg acaagctgag cgtcgcactg aaagctccag
     1981 ccgcgattcg cgaagcgcgc cgggcgatct gatgcacctt gcgcggaagc tgcttcgtca
     2041 gcacacgtcc gttcgcgcgc gtcacaaaac gcacgcacag acgtcctctg gaacgctcga
     2101 caagacgcat cgcttcgggt cgggtcaaag cagaaagatt ggtgacgtcg agtttgcagt
     2161 gctcgcaaaa ccttactcga tcgttaccag tcatcgaatc ccaatcggcg tcgcagggcg
     2221 caggaatatt tatccgatcg aaagaatgaa ttgactgtgg catagctcgg ttcctttcaa
     2281 cgctcgaccg ctcgatgcaa tcgaactgtg ttgaacctgg ggagaagctc tttgtcttaa
     2341 cgcagactta gaccttcaac cggacatttc tgttccggca tttagcttgc acttaaaaaa
     2401 taatcgaacc tgaggaggcc atccgtgacc caaccggcgc gcacttactt caccacaaaa
     2461 cgcaccggcg caacgatcgc gcgcgcctcg ggattgtagt agtcatagac aatcgaggcc
     2521 gcgctctgcg cattcatgcc gaaccgcggc ttaaacttaa agttgaattt cgtgccgccg
     2581 gcgcgtggcc agagataaag gatcacgcga tctggtagca catcgtattg gctgatgctc
     2641 caatccgaac ctttcatggc cgtctccagc gaagcgcggt caacgtcaga tcccggcggc
     2701 aatccaatct cagccagcat cattccatag ccgcgtaaac cgatgcgttc tgcttccacg
     2761 cgacagtcga tttcgtctgt aacctgcgcg ctggtcttat caaacttcgt caccaggcgc
     2821 aggccgctgg ctccgttcgc gcgccagttt gcttcctgcg tcgctaccga ttcgcgccag
     2881 ggcaggtaat aggtcgcgac cgcctgggcc gaagctggtg agctgccggg tgcgcgtttg
     2941 atgtccacgc ggttgatacc ggcttgaata aaggacgaga gatcgaccga gatgggactg
     3001 accagttggt tcgccacggg cagttcgatc gatttcacag cgcgcccatt cacgacgatc
     3061 tgagcgatcc gcgatgcgtc cggggcattg acatcgcgcg ccaacaaagc gagcagcgtg
     3121 tcgagcacat tgatcgtcgc ttgtgtcgaa taccaaacgc cgtagcgatc tttttcacgc
     3181 aacagaaaga gcaggccgcg gtcaatcaac tgatcgctgt cgcgcaagtt gccaacttga
     3241 gccaccgtca aagcctgcac caccagcgcc gtggtctcga cgcgaccggc ccggccccag
     3301 ccgtaaaacg gtgtgtttgt ctcaagcgac cagtagttag cgccattctc ttcgagcgcc
     3361 agcgcccgca gcctcgcgat cgctttcgcg gcgcggatgt ccgcaacttg aagactggcc
     3421 aatgcatagg aggccagcaa atatggctcg tcgatctcgc cggtgcgctg ctcgagataa
     3481 tccagggcgc gctttagttc gggtccaact accttgaatg gttgttgagt tgtcttgttc
     3541 gaggtgccgt cgatcttcgc agtttcggcg gtcatggcca gcacgcgcgc gacgaacgcg
     3601 gtcagcattg cggtgcgccg ctgatcttct gtcttattcc cgtaggtgta tgccgcccaa
     3661 ctgccatccg cgcgctgctg tttgatgagc cagttacgag catctttgat cacgtgatca
     3721 tcgacttcga tcagctcaga ggcttcggtg agaaacctca gcgcgtaagc ggtcagtgcc
     3781 agatcgggtt cgccccggcc ccaataagtg aagccgccgc cctcgtcgcg gtaattcaac
     3841 agccgcgcgt agcccgcgcg caggtaacgc gtggcttttt tgtgcacgtc ggctccgccc
     3901 gcgggggcgc caattcgctt gtaattcttc agccaaagca aactcgggta ggtggatgag
     3961 atggtctgct cgccacagcc gtacggccgc gccatgattg cttcgacgct ttcggttacg
     4021 tgcgccagca gattcgggta aatcttcagt tctgcttttg ctgaattggg aatcgccgtt
     4081 gccggaatgt cgagggtgag cgttgcctga tttgaaacga tgtcgctcgt ggtgactgat
     4141 ttttcttcgc catcaggatg gacggttacc ggtttctcga tggcatcatt ggcgtcggaa
     4201 gccatcgccg tgatgcgctg cttgccgtcc actaccgaag cgctggcgcg gaaatcaaac
     4261 gtgctgcgca ttgcatcgcc cgcggcaacg tcaacctttt tggtcgcggc tcccagcaaa
     4321 gtgaaccaac cctccggctt aatttcaaga tcgaccgtct gcgcgcgatc taaatagtta
     4381 cgcactacga ccggcagaaa aatctcatca ccttcggtta gcacgcgtgg cggatcgtga
     4441 tcgacaaaga atggttgaaa ggatttgatt tctctctcga cgacaccgac ctgtccgtct
     4501 tcggtcgagc cgatcacgga catcttccag gtggtgatgt tgtcggcaag tttgaattgc
     4561 aactgcgccc ggccctgctt gtcggtctca agcgatggct gccagacaag cgtttccgga
     4621 aagtattcgc ggaggcgcgg ggtggaaagt tgctggccgg cggttcctgg tttcgtaacg
     4681 acgttcacac catccaaaac aaagcggcta gccctcgacg actggctcgt cgtcatgtcg
     4741 accaagcctg aagcgccagc agtcacgtta acagtttccg aaacagcccc cacgtccaac
     4801 gtcacattca gttgcgtaac gttcgacgac cggacaacga cgttagtgac aacggcgcgg
     4861 ttgaaagccg gcgcgtcgaa tatgacttca taagtccctg cggacaggtt cttgatgagg
     4921 tagaaaccat tttcattcgt ctcggcggtg cgctcgatgg aattgcgaag attcttggcg
     4981 gtgacttttg tcccaactat gaccgcaccc tgcggatccg tcacggttcc cgtaatggct
     5041 ccagtcgatc ctggcaagat cacccccggc tgttgcggct gaggcgcact
//
LOCUS       DATDBY010000617         9024 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1290442, whole genome shotgun sequence.
ACCESSION   DATDBY010000617 DATDBY010000000
VERSION     DATDBY010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 9024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9024
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1290442"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VIT19_11540"
     CDS             complement(<1..263)
                     /locus_tag="VIT19_11540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839660.1"
                     /translation="MAQNTLQLQRVFGDAFRQLDPKGRRFRLDNADIEVRFYPYAGLH
                     HTIRVRSGRVYVRLSDVFESAPADVMCSLAFLLVARLLSRKAPA"
     gene            604..1707
                     /gene="hrcA"
                     /locus_tag="VIT19_11545"
     CDS             604..1707
                     /gene="hrcA"
                     /locus_tag="VIT19_11545"
                     /inference="COORDINATES: protein motif:HMM:TIGR00331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HEY5839661.1"
                     /translation="MVNRSSKSGSSRPSAESRRQAVLAAIIHEHLRTGDAIGSHTVAE
                     KFAHAAGWSSATIRNVMAELDEFGLLEQPHTSAGRIPTDRGYRYYVDNIISGTRLSKS
                     DLKAIEDIGTVERLTARPDRLMERASHVLSELSENVGIVVWPSLAENGLQHISFVNLP
                     DSRILVAIVSTPNVVQDKVIRLDEKFTQAELDGIARYLNTEFHGKNLRAIRAEMVRRM
                     KEERALYDGLLRNAVLLCERSMEGEESNGGEVYIDGAFNILTKPEFANREELRELLRT
                     LEEKSRLVKILTECLASDPIRHNVKVIIGNENVMPSMKSCAVITASYRLDGEVSGTLG
                     VVGPTRIEYGRTMAVVNYLARFIERALSNDAAP"
     gene            1766..2425
                     /gene="grpE"
                     /locus_tag="VIT19_11550"
     CDS             1766..2425
                     /gene="grpE"
                     /locus_tag="VIT19_11550"
                     /inference="COORDINATES: protein motif:HMM:NF010738.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEY5839662.1"
                     /translation="MSDRKSQGGNRIPIRFDGEDVTEEEFATDALTAVDDDFVELEPQ
                     AASDAEGGPAVAELVATRAELKRLQNALAEAQEAVLRRQADFENYRKRVERERGETHS
                     RLVGDVAKKLLPVVDNLSRALDAERSVETSESPEFRHFLHGVELINRQLAEVLESFGV
                     EPIAAVGERFDPHVHEAVVTEPSDKHEPETVIEELARGYRIGDRLLRPSMVKVAAHKD
                     G"
     gene            2438..4264
                     /gene="dnaK"
                     /locus_tag="VIT19_11555"
     CDS             2438..4264
                     /gene="dnaK"
                     /locus_tag="VIT19_11555"
                     /inference="COORDINATES: protein motif:HMM:NF001413.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEY5839663.1"
                     /translation="MGKIIGIDLGTTNCCVAVLEGGTVQIVPNKEGGRTMPSVVGFTD
                     KGERLVGQIAKRQAVTNSANTVYAVKRLIGRKLDSAEVKRMCATVPFEIVTSPNGDAR
                     VQVQGKVYSPPELSGIVLQRLKAAAEDFLGEAVTDAIITVPAYFDDTQRQATKDAGKI
                     AGLLVNRIINEPTAAALAYGLGKSEAEKIAVYDLGGGTFDISILEMNNGVFEVLSTAG
                     NTFLGGEDFDEAIMNWMAEQFMEDTGIDLRKDRLALQRLKEAAERAKCELSSASETSF
                     NLPFIAADATGPKHLNKTLTRDKFEELVGELVEQTVEPCERALRDAKLEASQIDKVIL
                     VGGQTRSQIVERTVDKIFGKKPSTEINPDEVVAMGAAIQGGVLTGDVKDIVLLDVLPL
                     SLGLETRGGLFTKIIERNSTIPLRNSLNFTTVVDNQSSVEIHVLQGERDVSTGNRSLG
                     KFELVGIPPAPRGVPQIEVSFEVDANGIVSVSAADKATGREQQMRITPTSGLSQEEID
                     RIINEADTMAETDRTQRDKVALQNKLASLVRNTQRSFLEFGGLLEAEQQKAGELILLD
                     GEAAARADELGEIRMALDSVERLGRQLTAAMMKSVGATNKDD"
     gene            4363..5484
                     /gene="dnaJ"
                     /locus_tag="VIT19_11560"
     CDS             4363..5484
                     /gene="dnaJ"
                     /locus_tag="VIT19_11560"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF008035.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEY5839664.1"
                     /translation="MASKRDYYEVLGVGRSVTEQELKSTYRRLAHQYHPDKNQGDSDA
                     EEKFKEAAEAYAVLSDPEQRNRYDRFGHAGVSSAAGAAWGAPGFGGIEDILGDLFGFG
                     DVFGAAGRSGARRSTQQRGTDLRYDLEISLEQAATGMTAQLRIPKLEACESCDGAGTA
                     PGTKPETCQTCGGAGQVRFQQGFFSVSRTCGNCRGTGQIITSPCDKCRGHGRVEREKH
                     IEVKIPAGVETGSRLRLQGDGESGAYGGPAGDLYVVIHVAEHELFERQGNNLYSAVPV
                     TFAQAALGAEIQVKTLNGEDALKIPAGTQTGTVFRVRGQGMPVLGGRGRGDLFVSVSV
                     VTPTMLTREQRKLLEQLERIETKDLEDKKLSEKVRDIFG"
     gene            5665..6855
                     /locus_tag="VIT19_11565"
     CDS             5665..6855
                     /locus_tag="VIT19_11565"
                     /inference="COORDINATES: protein motif:HMM:NF024704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YARHG domain-containing protein"
                     /protein_id="HEY5839665.1"
                     /translation="MKSPFQLRSLISLGARASLPAISLVLVLAAFSVASAQDYPEMKQ
                     WESFDFASKRISAADVVKVKAENLQLMRGVVFGKHGRIFKDWEIKTYLQSRDWYKPNP
                     NFTNAALNDTERDNLDVIRIAEAEHHETVQPGDMRLYQNRLLTRRKLGTHTNAEWTVL
                     SAEIEAIHGRRFDDQPWLQQYFEERYWYKAANNYKPNLSATEEKNLRLIDTIRRQQRR
                     VALQPGDMELFENKLISEAMLRGLSLHELRLLRNEIYARHGRVFKTLWLQQYFGSQMW
                     YDANESFKDEEMSGPDKTNVETIVAYENKLHNQLSTKPITRALLQGLFIEDVRKMRDE
                     IYARRGKTFANRWTQKYFESLDWYKADPKFSDASLTVIEKRNVATIAAYEKRAVSAMS
                     VIEG"
     gene            complement(7233..8609)
                     /locus_tag="VIT19_11570"
     CDS             complement(7233..8609)
                     /locus_tag="VIT19_11570"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5839666.1"
                     /translation="MTAIYSARWVLPIASPPIENGAVAVAGETIVGVGAREDLVARFP
                     HAVASDFGASVLLPGLVNAHSHLELTVMRGFLESGETDFFAWLRKLTVARMSMTGDDL
                     FVSAACGAIEAARAGITCVGDSSSAAAQSMKALREIGVRGIVYQESFGPDPQLADENV
                     AKLQAQLAEMRALESANVRAGVSPHAPYTVSAPQLELIARWALDEYLPLMMHAAESEA
                     ERLFMFEGSGPFAEGLRARGIDWQGQKISTIEYLARHGVLETRPLLAHCITVNDADIE
                     TIRSAGAGVAHCPKSNAKLRHGRAPFARFLTANLNLGLGSDSVASNNNCDILEEARFA
                     TLLSRVRGTDLSLFRDSSAQTEVCATDALFAATLGGARALGLDGQIGSLAEGMQADLI
                     AVALDGAHQQPPTNPVDALIFSSSGRDVRMTMVAGKEVYRNDRLTTANELELQLQLRF
                     VRERLNNP"
     gene            complement(8614..>9024)
                     /locus_tag="VIT19_11575"
     CDS             complement(8614..>9024)
                     /locus_tag="VIT19_11575"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEY5839667.1"
                     /translation="GEIGLMQVTPTVAREWVAQSGAPEASPANAADPESLLAPAERNV
                     QIGSWYLGKFGEQYKNIPGGEARMLAAYNAGNSRVVEWARVPEGSPPLNEQQFIERID
                     IPSTRAYVTSILRRYREVKSAKGRLAAPFEWRHE"
BASE COUNT         2048 a         2476 c         2713 g         1787 t
ORIGIN      
        1 gctggtgctt tgcgtgaaag caaacgcgcg acgagcagaa aagccagaga gcacatgaca
       61 tctgctggcg ccgactcgaa gacatccgaa agccgaacat agacgcgacc ggaacgcact
      121 cggatcgtgt gatgaagccc ggcgtacgga taaaaacgca cttcgatgtc ggcgttgtcg
      181 agccgaaagc ggcgaccctt ggggtcgagt tgacgaaagg cgtcgccaaa gactcgctga
      241 agctgaaggg tattctgggc catgtcccgg agtgtctgac cgagccatct tatgggccag
      301 ttgaaacggg cgtcaaaccc gtcgcaagaa cgcgccaaaa acctcgaaaa tacggtgatg
      361 agccggtccg gagggttagt ttcttcttca ttgagtgcga ggcagaaacc caagtcaaag
      421 ccacacagca acttacagtg aacagggtgg gtaaccgaac cgttgctgac ctgcgcgcac
      481 cttctcgcga aatcttgaaa ttaaagggtt tgcggcactt ttcgttcttg gctatactga
      541 cccaacagtt gtctctcaga gacgattggc ccgccggttg gctgcgggac gaggacaaag
      601 aacatggtta acagaagttc caaatcaggg tcctcgaggc cgagcgcgga atcgcgccgc
      661 caggctgtac tcgccgcaat cattcacgag catctgcgca ccggagacgc gattggatcg
      721 cacaccgtcg cggaaaagtt tgcgcacgcg gcggggtgga gttccgcgac catccgcaat
      781 gtgatggctg agttggatga gtttgggtta ctcgaacaac cgcacacgtc cgctggtcgt
      841 attccgacgg atcgagggta ccgttactac gtcgataaca ttatcagcgg cacgcgcctg
      901 tcgaaatcag atctgaaagc gattgaggac atcggtacgg ttgagagact gaccgcgcga
      961 cctgatcgat tgatggagcg cgcgtcacat gtgctttccg agttgtccga gaacgtagga
     1021 atcgtggtat ggccgtcgct tgcggagaac gggctgcaac acattagctt tgtgaatctt
     1081 ccggacagcc ggatcctggt ggcgattgtc tcaacgccaa acgtcgtgca ggacaaagtc
     1141 attagactgg acgagaaatt cacgcaggcc gagttggatg gaatcgcccg ttatctgaac
     1201 accgaatttc acggcaagaa cctgcgggca atccgcgccg agatggttcg ccgcatgaaa
     1261 gaagaaagag ctttgtacga cgggttgctg cgaaacgccg tcttgttgtg cgagcgcagc
     1321 atggaaggcg aagagagtaa cggtggagag gtttacatcg acggcgcttt caacatcctg
     1381 accaaacctg agttcgcaaa tcgcgaagag ctgcgcgaac ttttgcgaac gcttgaagaa
     1441 aaatcacggc tggtgaaaat cctgacggaa tgtcttgcta gcgatccgat ccgtcataat
     1501 gtgaaagtga tcatcggcaa cgagaacgtc atgccctcaa tgaagagctg cgcagtcatc
     1561 actgcatcgt accgattgga tggtgaagtc tcaggcacat tgggagtcgt tggccccacg
     1621 cgaatcgagt atggccgcac aatggctgtg gtaaactatc ttgcgcggtt tatcgaacgt
     1681 gcactgtcga acgacgcggc gccctaacga aggggttcgg gccgtatcga ttccctgaaa
     1741 accagagatt acacgaagat ttatggtgtc agaccgaaaa tcgcagggcg ggaaccgcat
     1801 tccgattcgc ttcgacggcg aagacgtgac cgaagaggaa tttgccaccg atgccttgac
     1861 ggctgtagat gacgatttcg tagaacttga gccgcaagct gcaagtgacg cggagggcgg
     1921 cccggcggtc gccgagttag tggcgacgcg cgctgagttg aagcgcctgc aaaatgcgct
     1981 ggctgaagcg caggaagcgg tccttcgacg gcaggcggat tttgaaaatt accgcaagcg
     2041 cgtcgagcgc gagcgcggtg aaacccacag ccgactcgtc ggcgacgtcg cgaaaaaact
     2101 gttgcccgtc gtcgataatc tttcgcgcgc gctggacgcc gagcgttcgg ttgagaccag
     2161 cgagtccccc gagtttcgtc atttcctgca cggtgttgag ttaatcaaca gacaacttgc
     2221 ggaggtgctg gaatccttcg gcgtcgaacc aatcgctgca gttggtgaac gcttcgatcc
     2281 tcacgtgcac gaggcggtgg ttaccgaacc ttccgataaa cacgaacctg aaacagtgat
     2341 tgaagaactc gcccgcggtt atcgaatcgg cgaccgcttg ctacgacctt cgatggtcaa
     2401 agtcgccgca cacaaagacg gctaaacgct tttccttatg gggaaaataa ttggaatcga
     2461 tttaggaacg accaattgct gcgtcgccgt cctggaaggc ggcacagttc aaatcgttcc
     2521 taacaaagaa ggcggccgca ctatgccgag cgttgtcggt tttaccgaca agggcgaacg
     2581 gctggtcgga caaatcgcca aacgccaggc cgtcaccaac tcagccaaca ccgtctatgc
     2641 ggtcaagcga cttatcggcc gtaagctcga ttcagcggaa gtgaagcgga tgtgcgccac
     2701 ggtgccgttc gagattgtga cttcaccgaa cggcgacgcg cgcgtgcaag tccaggggaa
     2761 ggtctacagt ccgccggaac tttccggaat cgtcctgcag cgtttgaagg ctgccgccga
     2821 agactttttg ggtgaagcgg tcacggacgc gattatcact gttcccgctt acttcgatga
     2881 cacgcagcgg caggcgacaa aagacgcggg caagatcgcc ggcctgctag tcaaccgcat
     2941 tatcaacgag ccgaccgcgg ccgcactcgc gtatggcctg ggtaagtccg aagccgaaaa
     3001 gattgcggtc tatgatctcg gcggcggcac cttcgacatt tcgatcctcg aaatgaacaa
     3061 cggggtgttt gaggtccttt ccacggccgg aaacacgttc ctgggcggag aagattttga
     3121 tgaggcgatc atgaactgga tggcggaaca gttcatggag gacaccggca tagaccttcg
     3181 taaagaccgt ttggcactcc agcgtttgaa ggaagcggcc gaacgcgcca aatgcgaact
     3241 ttcgtcagct tcggaaacaa gtttcaatct tccgttcatc gcggctgatg caaccggccc
     3301 caagcacctg aacaagacgc tcacccgcga taagttcgag gagttggtcg gcgaactggt
     3361 tgagcagacc gttgaaccgt gcgagcgcgc tttgcgtgat gcaaaactcg aagcctcgca
     3421 aatcgacaaa gtaattctgg tcggcgggca gacgcgttcg cagatcgtcg agcgtactgt
     3481 cgacaagatt ttcggaaaga agccgtcaac tgagatcaat cccgacgaag tggtcgccat
     3541 gggcgcggca attcagggcg gcgtgctgac cggtgacgtg aaagacatcg tgctgctgga
     3601 cgtgttgccg ttgagccttg gcttggaaac gcgcggcggg ttgttcacga aaatcatcga
     3661 gcgcaattcg acgatcccgc tgcgcaacag tctgaacttt acaaccgttg tcgataatca
     3721 atcgtcggtt gaaattcacg tgctccaggg cgagcgcgac gtctcaaccg gtaaccgaag
     3781 tctcggcaag tttgaattgg ttggcattcc gccggcgccg cggggcgtgc cgcagatcga
     3841 agtttcgttt gaagtcgatg cgaatggaat cgtctcagtc tcggcggctg acaaagcgac
     3901 cggccgcgaa cagcaaatgc gcatcacgcc gacttccggt ctttctcagg aagagatcga
     3961 ccgaatcatc aatgaagccg acacgatggc cgaaaccgac cgcacgcagc gagacaaggt
     4021 cgctctacag aacaagttgg cgagcctggt gcggaacacg cagcgttcgt tccttgagtt
     4081 cggggggctg ctggaagcag agcagcagaa ggctggcgag cttatattgt tggacggcga
     4141 ggcggccgcc agggcggatg agcttgggga aatcagaatg gccctcgatt ccgttgagcg
     4201 gctggggcga cagcttacgg cggcgatgat gaaatcagta ggtgcgacca acaaggacga
     4261 ttgagcaact agcgcacttc ggatagaatt tccctgcggt cagtggcttt gccgtacagt
     4321 cggcacatct gctggccgct cgtttcgata aatacgaatt tcatggcaag caaacgcgat
     4381 tattacgagg ttctcggcgt cggccgcagc gtcaccgagc aggagttgaa gagcacttac
     4441 cggcggctcg cacaccagta tcacccagac aagaatcagg gcgactcgga cgctgaagaa
     4501 aaattcaaag aagcggccga ggcgtacgcc gtgctgtccg atcccgaaca gcgcaaccgc
     4561 tatgatcgtt ttggtcacgc cggcgtttcg agtgcggccg gcgcggcatg gggagcaccg
     4621 ggtttcggcg gcatcgaaga cattctcggc gatttgttcg gtttcggcga tgtgttcggt
     4681 gcggcaggcc ggagcggcgc gcgccgctca acgcagcagc gcggcacgga tctacgttac
     4741 gacctcgaaa tttctttgga gcaagccgca accggaatga cggcgcagct tcgcatcccg
     4801 aaactcgaag cgtgcgaatc gtgcgatggc gccggcacgg ctccgggaac aaaaccggaa
     4861 acgtgccaga cctgcggcgg cgcaggccag gtgcgttttc agcagggctt cttttcggtc
     4921 tcgcgcacct gcggcaattg tcgcggcacg ggacagataa tcacttcgcc gtgcgataaa
     4981 tgccggggcc atgggcgggt tgagcgcgag aaacatatcg aggtaaagat tcccgccggc
     5041 gtcgaaacgg gttcgcgact gcggctgcaa ggtgacggcg agtcaggagc gtatggcggt
     5101 ccggccggcg acctgtacgt ggtaattcat gtcgctgaac acgaattatt tgagcggcag
     5161 ggaaacaatc tttactcggc ggttccggtg acatttgcgc aggccgccct cggagctgaa
     5221 atccaggtca agacgctgaa cggcgaagac gcgctgaaga ttcccgccgg aacgcagact
     5281 ggcactgtgt tccgcgtgcg cggccaggga atgcccgtgc tgggtggtcg gggccgtggc
     5341 gatttgttcg tctcagtctc agtcgtgacg ccaacgatgt tgacgcgcga acagcgcaag
     5401 cttttggaac agcttgagcg gatcgaaaca aaggatttgg aagacaagaa gctgtccgaa
     5461 aaggtccggg atatcttcgg ttgatgcggt tcttggcagc ctgcgcgttt agttatttcc
     5521 cctctccgct gcgcggagag gggctagggg agaggttggc gcggccgtaa ccccacccct
     5581 aacccctccc cacttgtggg gaggggaata gccgacagcc gcaaaacgat tcgtcgccgc
     5641 cgtctattct ccgagaggta acctatgaaa tcccctttcc aattgcgtag tttgatttcc
     5701 ctgggagcgc gggcatcctt gcccgcaatt tcgctcgttc tagtccttgc agctttctct
     5761 gtcgcttcgg cccaggacta tcccgagatg aagcagtggg agtcgttcga ctttgcttcc
     5821 aagcgtatct cggccgcgga tgtcgtaaag gtgaaggccg aaaacctgca gctgatgcgc
     5881 ggcgttgtgt tcggcaagca cggccgcatc tttaaagact gggaaatcaa gacctacctg
     5941 caatcccgcg actggtacaa gccgaatccg aattttacga acgcagcgct gaacgatact
     6001 gagcgtgaca accttgacgt tatccgcatc gctgaagccg aacaccacga gactgtgcag
     6061 cccggcgaca tgcgccttta tcagaatcgt ctgttgacac ggaggaagct gggcacgcac
     6121 acgaatgcgg agtggacggt gttgtcggcc gagattgaag ccatccacgg aaggcgtttc
     6181 gacgatcagc cttggcttca gcagtacttt gaagaaaggt actggtacaa agcggcaaac
     6241 aattacaagc cgaatctttc agcgactgaa gagaagaacc tgcgtttgat cgacacgatt
     6301 cgccgccagc aacggcgcgt ggcgctccag ccgggcgaca tggaattgtt tgagaacaag
     6361 ctgatcagcg aggcgatgct tcgtggatta agcctgcacg agctgcgctt actgcgcaac
     6421 gaaatttacg cgcgccacgg ccgcgtgttc aagacgctct ggctccagca atacttcggc
     6481 agccagatgt ggtacgacgc gaacgagagc ttcaaggacg aggaaatgtc gggcccggac
     6541 aagacgaacg ttgagacgat cgttgcgtac gaaaacaaac tgcacaatca actcagcacc
     6601 aagcccatca cgcgcgctct gctgcaggga ctgttcattg aagacgttcg caagatgcgc
     6661 gacgagattt acgctcgtcg cggcaagacg ttcgctaatc gctggacgca aaagtatttc
     6721 gagagtctgg attggtacaa agctgatccg aaattcagcg acgcttcgtt gactgtgatt
     6781 gagaaaagga acgtggcgac tatcgccgct tacgagaaac gagccgtaag cgcgatgagc
     6841 gtcatagaag gttgataagg ccaactttgg gcgccgcgtg acggcgccga gacaaacgga
     6901 agagtaagag taggcagtgg gcagtgggca ggtaaacctg ccactgctca tttttttgtt
     6961 ttcaaggggg gctttgcctc aagtagctga cgctcctgcg acgcgtagcg tcgaagtgaa
     7021 tttagcccgg cctttcaagg ccgggatgcc atttcgcaat gaggtgtgcg tcgcgtagcg
     7081 acggagtgaa atgactaggc attgatcatt gcgtcgctaa cgcgacgcat ggacttgtgc
     7141 tcgatttgat cccagccttg aaaggctggg ctaaattccg ctcgacgcta cgcgtcgcgg
     7201 gcacctgctc gcgacctttg aggtaaactg ttttatgggt tgttgagtct ctcgcggacg
     7261 aagcggagct gcaactggag ttcgagttca ttggcagtcg tgagtctatc atttcgatag
     7321 acttcttttc ccgccaccat cgtcattcga acatcgcgtc ctgaagagga aaaaatgagc
     7381 gcgtccaccg gattcgtggg cggttgctga tgagcgccgt cgagcgctac ggcaatcaag
     7441 tcagcctgca ttccttctgc cagggagcca atctgaccat caagtcccag ggcccgcgcg
     7501 ccgccgagcg tggctgcgaa gagggcgtca gtggcacaga cttcagtctg tgcacttgag
     7561 tcacgaaaca gactgaggtc tgtgccacgc acacgcgaca gcaacgtcgc aaagcgcgct
     7621 tcttcgagaa tgtcgcagtt gttgttgctg gcaaccgaat cgctaccgag accaagattc
     7681 aaattcgcag tgagaaacct ggcgaatggc gcgcgcccat ggcgcagctt cgcattcgac
     7741 ttgggacaat gcgcgacgcc cgcgcccgcg ctgcgaatcg tttcaatatc cgcgtcgttg
     7801 acagttatgc aatgggcaag caacggccgc gtttccagaa cgccgtgccg ggccaggtac
     7861 tcgatcgtgg atatcttctg accttgccaa tcaatgccac gcgcgcgcag gccttccgcg
     7921 aacggtccgc taccctcgaa catgaacaat ctctccgctt cagattcggc ggcgtgcatc
     7981 atcagcggca gatattcgtc gagggcccac cgtgcaatta gctcgagctg tggcgcgctg
     8041 acagtgtaag gcgcatgcgg cgacacgccg gcacgcacgt tcgctgattc aagagcgcgc
     8101 atctccgcaa gttgagcctg cagcttcgca acgttttcgt ccgcgagctg cggatccggc
     8161 ccaaacgatt cctggtacac aatgccgcgc accccgattt cgcgcagagc cttcatcgac
     8221 tgcgccgcgg cggaacttga atcgccgacg cacgttattc cggcgcgcgc cgcttcgatc
     8281 gcgccgcagg cggctgaaac aaaaagatcg tcgcccgtca tcgacatgcg cgcgacggtc
     8341 aacttccgca gccatgcaaa aaaatcagtc tccccgcttt ccagaaagcc gcgcatgacc
     8401 gttaactcaa gatgcgaatg agcgttgacc agtcccggca agagaacgct ggcgccgaaa
     8461 tccgaagcca ccgcatgagg gaaacgcgcg acgagatctt ctctggcgcc gacaccgacg
     8521 atcgtttcgc cggccacggc caccgcccca ttctcaatcg gcggtgacgc gattggcagc
     8581 acccagcgcg ctgaatagat cgccgtcatt cggttattcg tgtcgccact caaagggcgc
     8641 cgccaatctt cctttggcgg atttcacttc gcgataacgg cggagaattg aggtgacgta
     8701 ggcgcgcgtc gacggaatgt cgatgcgctc gatgaactgt tgttcgttaa gcggaggcga
     8761 gccttcaggc acgcgagccc attcgacaac gcggctgttt ccagcgttgt acgcggcgag
     8821 catgcgcgct tcgccccccg ggatgttttt gtattgctcg ccgaacttgc cgagatacca
     8881 ggaaccgatt tgcacgtttc gttcggccgg ggccaataag ctctcgggat cagcggcgtt
     8941 tgccggcgag gcttccggcg cgccgctttg ggcaacccat tcgcgcgcca ccgtcggggt
     9001 gacctgcatc aatccaatct cgcc
//
LOCUS       DATDBY010000618         6248 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2113354, whole genome shotgun sequence.
ACCESSION   DATDBY010000618 DATDBY010000000
VERSION     DATDBY010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6248
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2113354"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..710)
                     /locus_tag="VIT19_11580"
     CDS             complement(<1..710)
                     /locus_tag="VIT19_11580"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhjD/YihY/BrkB family envelope integrity
                     protein"
                     /protein_id="HEY5839668.1"
                     /translation="MAVANSTSDRLKRISRQSFGVRNRSPWRRMLSHAVHQFHENDLF
                     TSAAAMSYFGLMTLFPALLLLLALSNRVAAGTQMISRVVQVYPGSSKFLQETITSLSG
                     ISTGAIITCAVVVLWAGSWVFAVVERALNRVWGTTHRTFLHGRATTLGMIGSVGLLLS
                     LSVLTTSVLVYLREVADRVSPRQLENYPVLSTAGSVFWQIVFAVVSLLVTFTLFAIVY
                     KFMPNAYVSVRDTIPGAV"
     gene            complement(781..1824)
                     /gene="ruvB"
                     /locus_tag="VIT19_11585"
     CDS             complement(781..1824)
                     /gene="ruvB"
                     /locus_tag="VIT19_11585"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF000868.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEY5839669.1"
                     /translation="MPKATRAEEALSGTPTEEDRQYELSLRPAKLAEYIGQTKAKENL
                     RVYIAAARKRREALDHVLLTGPPGLGKTTLAHIIANEMGAQLRSSSGPAMEKAGDVAA
                     LLTTLQEGDVLFIDEIHRLMPVIEEKLYPAMEDFQFDFIIGQGVGARSIKLDIPKFTL
                     VGATTRAGLISAPMRARFGINFHLDFYSHENLETICKRSASILNVEIDESGAQEIAKR
                     ARGTPRIVNRLLRRVRDYAEVDYDGRITHEVANDALNRMEVDTYGLDEMDRKLLSTII
                     EKFEGGPVGVGTLSAAIHEEKDTIEEIIEPYLIQIGFLNRTPRGRMATQLAYQHFGAR
                     AAGQLRPTLFDSP"
     gene            complement(1931..2557)
                     /gene="ruvA"
                     /locus_tag="VIT19_11590"
     CDS             complement(1931..2557)
                     /gene="ruvA"
                     /locus_tag="VIT19_11590"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEY5839670.1"
                     /translation="MIAHLSGTLLSKQATSVIVDVAGVGYELAIPLSTFYDVGEIGEP
                     VQLRVYTHVREDALQLYGFKTARERELFLQLISVNGVGPALAIKLLSGMNADEMIASI
                     RTNNLVRLVAIPGVGRKTAERLVVDLRDKIAALSSPALEEEFAAKAAVEGAPTTTEAM
                     RNDAMSALANLGYQRAAVEKAVKNALDEGGELSVEVILRRSLRSLAKV"
     gene            2610..3371
                     /locus_tag="VIT19_11595"
     CDS             2610..3371
                     /locus_tag="VIT19_11595"
                     /inference="COORDINATES: protein motif:HMM:NF003992.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HEY5839671.1"
                     /translation="MEVSRAGDAALYFDGTRVMKKEKISELTTNRLSVYLRCLNELAA
                     AGIKTVSSQDLAEQFNLNSAQIRKDLGYFGEFGVRGTGYFIADLRLHLTKILGLDQPH
                     RVGIIGAGRLGTALANYNGLSKSNFSVVALFDNDPEKVGENVGSDGIPVHDVKQLAKL
                     VRDEGIDVAVIAVPARAAQKVLNQITAAGVKAILNFAPAPLTSRLGVKVKTVDLTTSL
                     ESLSYFLAQPGAARVTNSARTNDANSAHKRQTHEI"
     gene            3371..4192
                     /locus_tag="VIT19_11600"
     CDS             3371..4192
                     /locus_tag="VIT19_11600"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY5839672.1"
                     /translation="MDEQTARRDLIKVCHLMYERSYVVSSDGNVSVRLDDGRILATPT
                     MTCKGRMTEDLIAVTDLEGRALNNQKASSELAMHLLIYRERPDVKAVCHAHPPNGTAF
                     AVAGLAIDQPILSEVILTLGCVPLAEYGTPSTDELSDAMRPLVKHHNALLMANHGAVA
                     YGSDLWQAWDRLETLEHTAKIAILSRVLGGSRNLSPDAIEKLINVREASGYLGESARC
                     QACGYLHETNLTCPTGDRPAPRSGYSSQSNGSGRVSLSREELVELLSQAARLNES"
     gene            4319..4606
                     /gene="eutM"
                     /locus_tag="VIT19_11605"
     CDS             4319..4606
                     /gene="eutM"
                     /locus_tag="VIT19_11605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutM"
                     /protein_id="HEY5839673.1"
                     /translation="MQEALGMVETKGLVAMIEAADAMVKAANVTLVGYEKIGAGFVTA
                     IVRGDVAAVKAATDAGAAAARRVGELVSVHVIPRPHGSVDEAMPITNQARA"
     gene            4603..4881
                     /locus_tag="VIT19_11610"
     CDS             4603..4881
                     /locus_tag="VIT19_11610"
                     /inference="COORDINATES: protein motif:HMM:NF015289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EutN/CcmL family microcompartment protein"
                     /protein_id="HEY5839674.1"
                     /translation="MIIARIIGTVVASQKDERLEGKKLLIVRPINLDGSDTSGYVVAV
                     DTVGAGFHERVLVVAGSSARLAQNMKDAPVDAAVVGVIDTVDIMAPEK"
     gene            4883..5158
                     /locus_tag="VIT19_11615"
     CDS             4883..5158
                     /locus_tag="VIT19_11615"
                     /inference="COORDINATES: protein motif:HMM:NF015289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EutN/CcmL family microcompartment protein"
                     /protein_id="HEY5839675.1"
                     /translation="MQLARVIGTVVATVKNESLRNRKLLVVQSLNKDLAPQGKPMVAV
                     DAAGAGVGELVFWCRGKEASFPFKREDTPTDCTIIAIVDSDEHVCCG"
     gene            5299..5586
                     /locus_tag="VIT19_11620"
     CDS             5299..5586
                     /locus_tag="VIT19_11620"
                     /inference="COORDINATES: protein motif:HMM:NF015289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EutN/CcmL family microcompartment protein"
                     /protein_id="HEY5839676.1"
                     /translation="MIIAKVLGNVVATQKNHRYESARVMMCEQMTPEGELTGHTILAL
                     DSVDAGVGDTVLVVQEGWSASTSATGKAGAAIDTAIVGVIDHIDLLEKSGQ"
     gene            5622..6164
                     /locus_tag="VIT19_11625"
     CDS             5622..6164
                     /locus_tag="VIT19_11625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839677.1"
                     /translation="MSSNSDQAKRIAERVARKLADSSSSAGVQNPSANSGNGVASDQP
                     RARIIDFISSGPPVRSKSSVVAPSTPVEQPPQNSSKTSSEFFQFIPATQSPWLGRLPA
                     MLGQDVAQSANLSAASPGGQPGWGASPPTVDHPSQERFGIEEATVAELVEFFEKEKKC
                     SVDPSGKPCDHCAMCNSRGF"
BASE COUNT         1379 a         1708 c         1842 g         1319 t
ORIGIN      
        1 atcactgcac cgggaattgt gtcgcgcacg ctgacgtacg cgttcggcat gaacttgtac
       61 acgatggcga acagcgtaaa agtgaccagc aagctaacca ccgcgaacac tatctgccaa
      121 aacacactgc ctgccgttga aagcaccggg tagttttcga gttgccgagg ggaaacacgg
      181 tccgctactt cgcgcaaata gacgagcacc gaagtcgtga gcaccgacag cgataacagc
      241 aaacccacac ttccaatcat tccgagcgtc gtggctcggc catgaagaaa tgtgcgatgg
      301 gtcgtgcccc agactcgatt cagcgcgcgc tcgaccaccg caaaaaccca cgatccagcc
      361 cacagcacga cgacggcaca ggtgatgatg gcgcccgtgc tgatgccgga aagcgatgtg
      421 atcgtctctt gtaagaactt gcttgagccg ggataaacct ggacgactcg cgaaatcatt
      481 tgcgttcccg cggccacgcg gttgctgagt gccagcaaca aaaggagcgc cggaaacagc
      541 gtcatcaaac cgaagtagct catcgccgcg gccgaagtga acaaatcatt ttcatgaaat
      601 tgatgaaccg cgtgcgagag catgcgacgc cacggcgagc gatttcgcac gccgaacgat
      661 tgacgcgaga ttctcttcaa acgatctgat gttgagttgg cgacggccat gttcgtttag
      721 agccgggact tgtcccggcc tgggcagtgc ggcccaagag ccgcagctaa acttcgcatt
      781 tcagggggaa tcaaacaagg tggggcgcag ttgtcccgcc gcccgggcgc caaaatgttg
      841 ataggcgagt tgggtcgcca tccggccgcg cggcgtgcga ttcaggaagc caatttgaat
      901 caggtatggt tcgataattt cttcaatcgt atctttctct tcatgaattg cggctgataa
      961 agtgccgact ccgaccggac cgccttcaaa cttctcaata attgtagaca acagtttgcg
     1021 gtccatctcg tcgaggccgt acgtatcgac ttccatgcga ttaagcgcgt cgttcgcgac
     1081 ttcgtgtgtg atgcgcccgt cataatcgac ttccgcgtaa tcacgcaccc gccgcaacaa
     1141 gcggttgacg atgcgtggcg tcccgcgcgc gcgcttggcg atctcctggg cgccgctctc
     1201 gtcaatttcg acgttcagga tgctcgccga acgcttgcag atcgtttcga ggttctcgtg
     1261 tgaatagaaa tcgaggtgga aattgatacc aaaccttgcg cgcattggcg cactgattag
     1321 cccggcgcgc gtggtcgcgc cgaccagggt gaactttggt atgtcgagct tgattgaacg
     1381 cgcgccaacg ccctggccga tgatgaaatc aaactgaaaa tcttccattg ccgggtagag
     1441 tttttcttcg atcaccggca tcagccgatg aatctcgtca atgaaaagca cgtcgccttc
     1501 ctgaagcgtg gtgagcaacg ccgcgacgtc gccggccttt tccatcgccg gacctgatga
     1561 agagcgaagc tgcgcgccca tctcgtttgc gatgatgtgc gccagcgtgg tcttgcccag
     1621 tcccggcgga ccagtgagca aaacgtgatc gagcgcttcg cgacgtttac gcgcggcggc
     1681 aatatagacg cgcagatttt ccttggcttt ggtttgcccg atgtactcgg cgagcttcgc
     1741 cggacgcaga gacagttcgt attggcgatc ctcttcggtc ggagttccgc tcagcgcttc
     1801 ttctgctctg gttgctttgg gcattggtaa ctgaattgtg aatcgcgccg gtgtaacggt
     1861 caactctctg tgtggcacag actttagtct gtggatccgc tcgcgaaatc acagactgaa
     1921 gtctgtgcca ctaaaccttt gccagcgatc tcaggctgcg tcgcagaatc acttcgactg
     1981 aaagttcgcc accttcatcg agggcgttct ttacggcttt ctcaaccgcg gctctttgat
     2041 aaccgaggtt cgccagcgcc gacattgcat cgtttcgcat tgcttccgtc gtcgtcggcg
     2101 cgccttccac ggcggccttc gcggcgaact cttcttccaa agcaggcgaa gatagcgcgg
     2161 caatcttgtc gcgcagatcg acgaccagcc gttctgcggt ctttcgcccg acgccgggaa
     2221 tcgcgaccaa ccgcaccaga ttgttggttc gaatcgacgc gatcatctcg tccgcgttca
     2281 tccctgacag aagcttgatg gccagggcag ggccgacacc gttcacggaa atcagctgca
     2341 ggaacagttc gcgctcgcgg gcggtcttga aaccataaag ctgaagcgca tcttcgcgca
     2401 cgtgcgtgta gacacgcagc tggaccggct cgccgatttc gcccacgtca taaaacgtgg
     2461 acagcggaat cgctaactca tagccgacac cggcgacatc gacgatgacg gatgtcgcct
     2521 gtttggaaag cagtgttcct gaaagatggg cgatcattag ataagcgagt acggtcgcga
     2581 ttattcacga agcaccgctg cattcgcaaa tggaagtttc gcgcgcaggc gatgcggcgt
     2641 tatactttga cggcacgcgc gtgatgaaga aagaaaagat ttcagagctc accacgaacc
     2701 gcctgagcgt ttacctgcgt tgcctgaacg agttggccgc tgcgggaatc aaaacagtct
     2761 catcgcagga ccttgctgag cagttcaacc tgaattcagc gcagattcgc aaagaccttg
     2821 ggtactttgg cgagtttggc gtccgtggca cgggctattt catcgcagac ctcagacttc
     2881 atctgacgaa aattctcgga ttagatcaac cgcatcgcgt cggcatcatc ggcgccggcc
     2941 gcctgggaac ggcgctggcg aattacaacg gcctttccaa atcgaacttt tcggtggtcg
     3001 cgctgttcga taacgatccg gaaaaagttg gcgagaacgt cggatcagat ggcatcccgg
     3061 ttcacgacgt aaagcaactc gccaagctgg ttcgcgacga aggcattgat gtagcggtga
     3121 tagccgtacc cgcgcgcgcc gctcagaaag tgctgaatca gatcacggct gccggcgtaa
     3181 aagcgattct gaattttgct cctgcacccc tgacgtcgcg tctgggcgtg aaggtcaaga
     3241 cggttgatct gactacatcg cttgagtcgc tttcgtattt tctcgcgcaa cctggcgctg
     3301 cacgcgtgac gaacagcgcg cggacgaatg atgccaacag cgctcacaag cgacagaccc
     3361 acgaaattta atggacgagc aaaccgccag acgcgatctc atcaaagtct gtcatctgat
     3421 gtacgagcgt agctacgtcg tctcgtctga cggcaacgtg agtgtgcggc tcgatgatgg
     3481 acggattctg gcgacgccga ccatgacgtg caaaggccgg atgacggaag atctaattgc
     3541 ggtcacagat ctcgaaggac gcgcgcttaa taatcagaaa gcctcgagcg aactcgcgat
     3601 gcaccttttg atttatcgcg agcggccgga cgtgaaagca gtctgtcacg cgcatccgcc
     3661 aaatggaacg gcgttcgccg tggctggatt ggcgatcgat cagccgattc tttccgaagt
     3721 gattctgacg ctgggctgtg tgccgctggc ggagtacggc acgccttcga ctgatgagct
     3781 gtcagatgcg atgcggccgc tggtaaaaca tcacaacgcg cttttgatgg ccaatcatgg
     3841 agcagtggcg tacggttccg acctttggca ggcctgggat cggctggaaa cgctggaaca
     3901 caccgcgaag attgcgatcc tttcccgcgt gctcggcggc tcgcgaaatc tttcaccgga
     3961 tgctatcgag aaattaatca acgtgcgtga ggcttcgggt tatctcggcg aaagcgcgcg
     4021 ttgtcaggct tgcgggtatt tgcacgaaac gaatctgacg tgtccgacag gcgatcggcc
     4081 ggcgccgcga tctggctact cctcgcaatc aaacgggtcg ggtcgggtgt cgctttcgcg
     4141 tgaagagttg gttgagcttt taagtcaggc ggcgcgcttg aacgaatcgt aagagaggag
     4201 cgcacttact gcgtgcgtgc ttctgcaatc gcgcacggta aatagagaac acgtgttatc
     4261 ctatttcacg atttacaatt tacgatttat taagtctgct tctcacagga gaaactgaat
     4321 gcaagaagca ctcggaatgg tggaaaccaa gggtctggtc gcgatgattg aagcggccga
     4381 cgcgatggtc aaagcggcca atgtcacttt ggtcggctac gaaaaaattg gcgccggttt
     4441 cgtgacggcg atcgtgcgtg gcgacgttgc ggctgtgaaa gcggcgaccg acgcaggcgc
     4501 agcggcggcg cggcgcgttg gcgaactggt cagcgtgcac gttatcccgc ggccgcacgg
     4561 cagcgttgac gaggcgatgc cgatcacgaa ccaagcgcgc gcatgatcat cgcccggatt
     4621 atcggcacag tcgtggcgtc gcaaaaggac gaacggctgg aaggaaagaa gctgctcatc
     4681 gtccggccga tcaatcttga tggatcggac acgagcggct acgtggtcgc cgttgatact
     4741 gtcggcgcgg gatttcatga gcgcgtgctg gttgtcgccg gttccagcgc gcggttggcg
     4801 cagaacatga aagatgcccc agtggacgcg gccgtcgtcg gggtgatcga tacggttgat
     4861 atcatggctc ccgagaaatg aaatgcaact ggcgcgcgtc atcggaaccg ttgttgccac
     4921 cgtcaagaac gaatcgctgc gtaatcgcaa gctcctggtc gttcaatccc tcaacaaaga
     4981 tttagcgccg caaggcaagc cgatggtggc tgtggatgcg gcaggcgccg gcgtgggcga
     5041 acttgtgttc tggtgtcggg gaaaggaagc gagctttccg tttaagcgcg aagacacacc
     5101 aactgactgc acgataatcg cgattgtgga ttcagatgag catgtgtgtt gtgggtaaga
     5161 cgttctttgt acttcgtgct ttgtgaaaag agcgtgcttt gtgcttcgta ctttgttctt
     5221 tgatgtccag tcgcagtagc tcaacatatc tcagaagcca aagtacaaag cacaaagtac
     5281 aaagtacgct tttcagaaat gatcatcgcc aaagttttag gcaacgtcgt cgcgacgcaa
     5341 aagaaccacc gctacgaaag cgcgcgggtg atgatgtgcg aacagatgac gcccgaaggc
     5401 gagctgactg gtcacacgat cttggcgctc gactcagtcg atgcaggagt tggcgacacg
     5461 gtcctggtgg ttcaggaagg ctggagcgcg tcaacgagtg cgacggggaa agcaggcgcc
     5521 gcgatcgata cggctatcgt aggcgtcatc gatcatattg atttgttgga gaagtcgggg
     5581 cagtagcccg accatgagag agtgcgttcg tcagagggct aatgagttct aattcagatc
     5641 aagcaaaacg aattgccgaa cgcgtggcgc ggaagcttgc agattcgtcg agtagtgctg
     5701 gagttcaaaa cccgtcggca aacagtggaa acggggtggc ttccgatcag ccgcgcgcgc
     5761 gaatcattga cttcatttct tccggaccgc ccgtgcggtc gaagtcgtcg gtcgttgctc
     5821 cttcaactcc agttgaacag cctccccaga attcatcgaa aacgtcgtcc gagtttttcc
     5881 aattcatccc ggctacgcaa tcgccctggc tcggcaggct gccggcgatg ctcggccagg
     5941 acgttgctca atcggcgaat ttaagtgcgg cgtccccagg tgggcagccc ggctggggtg
     6001 caagtccccc aaccgtagat catcccagcc aggaacgctt cggcatcgaa gaggcgacgg
     6061 tcgctgaatt ggttgagttc ttcgagaaag agaagaagtg ctcagtcgat ccgagcggga
     6121 agccttgcga ccactgcgcg atgtgcaact cgcgcgggtt ctagtcggaa cccccgcaac
     6181 ctgcgtgcgg caccccggca tccccgggga ggcgagcaag atgctcgcga cccgcagaca
     6241 agatgcct
//
LOCUS       DATDBY010000619         2345 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1664843, whole genome shotgun sequence.
ACCESSION   DATDBY010000619 DATDBY010000000
VERSION     DATDBY010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1664843"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..623)
                     /locus_tag="VIT19_11630"
     CDS             complement(<1..623)
                     /locus_tag="VIT19_11630"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEY5839678.1"
                     /translation="MKSIIVGTAGHIDHGKTALVRALTGIDADRLPEEKQRGITIDIG
                     FADLDLGDVRVGFVAVPGHERFVKNMLAGAHGIDVVALVIAADESVMPQTREHFEICR
                     LLDVRSGLIVLTKKELVDEEMLGLVREEVGEMVAGSFLDGAPIVAVSSRTGEGLDELK
                     STLREVAGRVPTRSDNLVTRLPIDRAFTMSGFGAVVTGTLISGEIDEG"
     gene            779..1354
                     /locus_tag="VIT19_11635"
     CDS             779..1354
                     /locus_tag="VIT19_11635"
                     /inference="COORDINATES: protein motif:HMM:NF019614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HEY5839679.1"
                     /translation="MAQFPKPPATVFVALLRGVNVGGNNIISMKSLKTSFEQLGFSDV
                     STYINSGNILFKAKERDARKLETKIEAMLSKEYKLGCKVVVRSFSEMASLIENLPKNW
                     NGDTDWKYNVIFLRHSIDSEKVLESLGPKREIEKVVYYPGTLLWSARISDMKRTSLEK
                     LSSQKLFRDMTVRNTNTTRKLYELMNKMAED"
     gene            1360..2286
                     /locus_tag="VIT19_11640"
     CDS             1360..2286
                     /locus_tag="VIT19_11640"
                     /inference="COORDINATES: protein motif:HMM:NF025224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839680.1"
                     /translation="MRQFLIALLLLTAFVSPALTQKPDPAKSLPEPRDAAVRDRERRA
                     LIEFYEALGGPDWIERDFWASDRPVGEWHGVTTDADGYVTVLTIYDNNLIGPMSAAIC
                     RLERLHTMHLSFNKISGAMPDKLGDCRALKNFWVKGNKITGQLPAGVAVLPELEYLDL
                     HANEMSGPLPTVWNAPKLKIVRAEDNRISGELPGQLLRQPLLEEFFIHNNELAGSIPT
                     SLNPNLRAVLLANNKLTGTIPAEFGKLKKLTDLRLNRNQLSGSIPDFSGATALQVLRL
                     DYNRLTGPIPDGLAKRLMVFDASHNPGLAPAK"
BASE COUNT          548 a          680 c          638 g          479 t
ORIGIN      
        1 ccctcgtcaa tctcgcctga aatcaaagtg cccgtgacta ctgcgccgaa tccgctcatc
       61 gtaaacgcgc gatcgatcgg cagccgcgtg actaaattgt ccgaccgtgt gggcacgcgt
      121 ccagccactt cacgcagagt actcttcaac tcgtccaggc cttcgcccgt gcgggaacta
      181 acggcaacga tcggtgcgcc atcgagaaat gatccggcaa ccatttctcc gacttcttct
      241 cgcaccagcc ccagcatttc ttcatcgacg agttcttttt tggtaagcac gatgaggcca
      301 cttcgcacat cgagcaaccg gcagatttca aagtgctcgc gcgtctgcgg catcacgctt
      361 tcgtcggccg cgatcaccag cgcgaccacg tcgatgccgt gcgcgccggc caacatgttc
      421 ttgacgaagc gctcatggcc cggcacagcg acgaacccaa cgcgcacatc gcccaaatcg
      481 agatcggcga atccgatgtc gatcgtgatg ccgcgctgtt tttcttccgg cagacggtca
      541 gcatcgatcc ccgtcagcgc gcgcaccagc gccgtcttgc cgtgatcgat gtgacctgcc
      601 gtgccgacga tgattgattt cataagctaa ggaactcgtg gcagaaaccc gaccgtgagg
      661 gtgccaacgc cactttgcac cctccctcac ggtcgggttt ctgccacaga gaagagttca
      721 cacaaattag cattgatcat cttggcaggc gacctaagag gctgtataag gtgagccgat
      781 ggcgcaattc ccaaaacccc cggccacggt attcgtagcc ctgctgcgcg gcgtgaacgt
      841 cggcggcaac aacatcatca gcatgaagtc gctcaagaca agcttcgaac agttggggtt
      901 cagcgacgtc agcacctaca tcaacagcgg gaacatcctg ttcaaggcaa aggaacgcga
      961 tgcccgcaag ctcgaaacaa agatcgaggc gatgctgtcg aaggaataca agcttggctg
     1021 caaagtagtt gtccgaagct tctcagaaat ggcaagcctg attgaaaatt tgccgaaaaa
     1081 ctggaatggc gacaccgact ggaagtacaa cgtgatattt ctcaggcact cgattgattc
     1141 tgagaaagtg cttgaaagtc tcggacctaa acgtgaaatt gagaaagtag tttattatcc
     1201 tggcacgctt ctatggtcgg cgcggataag cgatatgaaa cggacatcgc tggagaagct
     1261 ttcgagccag aaactgtttc gggacatgac cgtgcgaaat acgaatacga cgcgtaagct
     1321 ctacgaactc atgaacaaaa tggcggagga ttaaccgagt tgaggcaatt tctaatcgcg
     1381 cttttgctgc taactgcgtt cgtttcgccc gcactgacgc aaaaacccga tccggccaaa
     1441 tcccttcccg aacccaggga cgccgccgtg cgcgatcgcg aacgtcgcgc cttgatcgag
     1501 ttctatgaag cgctcggcgg gcctgactgg atcgagcgcg acttctgggc gagtgatcgt
     1561 ccggtaggcg agtggcacgg cgtgacgacc gacgccgacg gttatgtcac ggtgttgacg
     1621 atctacgaca acaacctgat tggcccgatg tccgcggcca tctgccgtct ggaacggctg
     1681 cacacgatgc atctttcgtt caacaagatc tcgggtgcca tgccggacaa gcttggcgac
     1741 tgccgcgcgc tcaagaattt ttgggtgaaa ggaaacaaga ttaccggaca actgccggcg
     1801 ggcgtggcgg tactgcccga gcttgagtac ctcgacctgc acgcgaatga aatgtccggg
     1861 ccgctgccga cagtctggaa cgctcccaag ctcaagattg ttcgcgccga ggacaatcgc
     1921 atttcaggtg agttgccggg gcagttactt cgccaaccgc tgcttgaaga attctttatt
     1981 cacaacaacg aactcgcggg atcgattccg acttcgctga atccaaatct gcgcgccgtg
     2041 ctgctcgcta acaacaaact gaccggcacg attccagcag agtttgggaa gctgaaaaag
     2101 ctcaccgacc tgcgtcttaa tcgaaaccaa ctctcgggat cgattccgga tttctcgggg
     2161 gctacggcgc tgcaggtcct gaggcttgat tacaaccgat tgaccgggcc aattcccgac
     2221 gggctggcaa agcgcttgat ggtcttcgac gcatcgcaca atccgggatt ggcgcccgcg
     2281 aagtaggggc gaatttggac gcggcagctt atcttcagcg aattaattac gccggcccgc
     2341 ttgcg
//
LOCUS       DATDBY010000620        10208 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1290974, whole genome shotgun sequence.
ACCESSION   DATDBY010000620 DATDBY010000000
VERSION     DATDBY010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 10208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10208
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1290974"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..719)
                     /locus_tag="VIT19_11645"
     CDS             complement(<1..719)
                     /locus_tag="VIT19_11645"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEY5839681.1"
                     /translation="MTTAAKTESTLPVTFDDVLAAREFIAPYLPKTPLVRSEKLSALL
                     DCDYYLKCENVQPIGAFKVRGGVNLVGTPEEKKRPGIVTASTGNHGQSIAYAGRLFGV
                     PVIIYAPAENVNETKMQAMRALGAEVRLHGRDFDEARLETERVAETEGYRYVHSANEP
                     KLIAGVATIGLEIFEDLPDVDVILAPAGGGSCASGNCIVAKHLKPNVQVIAVQSEAAP
                     AMWHAWKNRSLDEYPTMKTEH"
     gene            complement(726..2312)
                     /gene="malQ"
                     /locus_tag="VIT19_11650"
     CDS             complement(726..2312)
                     /gene="malQ"
                     /locus_tag="VIT19_11650"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF011080.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HEY5839682.1"
                     /translation="MQFPRASGILLHPTSLPGRFGVGDLGNEAYRFADFLVASGQSLW
                     QVLPLGPTDEGGSPYFSYSAFAGNTLLISPEKLVEDGLLEKSDLVDLALHETERVDFD
                     KTRKTKNAFLRRAFERFQASDNALRESFESFDQENASWLDDYALFQALKKANGGKAWR
                     EWDRPLAMREPEALSRARIELRDEIDAQKFFQYLFFKQWHALKAVCNQRGIRIIGDVP
                     IFVAHDSVDVWTNREQFKLDEHGRPTVVAGVPPDYFSETGQFWGNPLYNWDRMREDGF
                     AWWIERLRASFQLFDLVRLDHFRGFAACWEIPAGETTAQNGEWVETPGRELFTAVRNA
                     LGEVAIIAEDLGVITPDVVELRKEFGFPGMRVLQFAFSGEKDNVNLPENFDRDVVAYT
                     GTHDNDTTAGWFNQLSEMNTTDAGKTREFCLNYLQSEGREINWDFIHAVLASVAGTTI
                     IPLQDVLGLGSEARMNTPNTTSDNWSWRYAGRWPADHAGGVRTDSDGANLTAEHAARL
                     RRLTEETNRSRNLKSATTES"
     gene            2392..3507
                     /locus_tag="VIT19_11655"
     CDS             2392..3507
                     /locus_tag="VIT19_11655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839683.1"
                     /translation="MQDKVSDESELKAYSAGMKYLTRRFPPCIARSALQCRLANGIIQ
                     LHYASVLILVLVTSGLLAQARATPAALNKNSVPAVGKLKVWVPAGIIGDNYWVYINGD
                     LTSAPPHGPTNPRSPYFMTVSASTVGSQPETRYGWDLFTKDGVVLSMRHEEYDHRLSA
                     YLKSASGDELRVFRPFELSLAPGTYTVELAILSKAPSYYDSTGIFPFVITRKYVADVQ
                     SGQTTQLYPGVPDYWYDPLGPFPVRAFRKFCTGSPEPDSKRILQLVSAYMDDPVVRVL
                     RRASASFRSPSTGVVVLNMPSAQGGPRQFDASQIRHIAATISANHVLPTHRDVADCQR
                     LFPQYHRSYGEFDKMIDVVGTDIESFRKLAADLERDR"
     gene            3653..5011
                     /locus_tag="VIT19_11660"
     CDS             3653..5011
                     /locus_tag="VIT19_11660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839684.1"
                     /translation="MSNVALLVVFACQSVMAQEPPWWTAEKKRCNLPSGLALETWKQQ
                     GGPCNDGASSPPPVDNRERERQLELELEQQRQLQRQQEEIERKRKANEADRRGLDAAN
                     RGRWKEAANLFIQALGYAPGNAAIRSHLDRANLAIADVGSAAEILALRQRIEDAIATA
                     NLEAARQQMEDEVAVQRLAALSESFRAQIIEDRRVNSTRPEPRRAQVFYPVLLKPVSP
                     SNPSARVLAQYQPTITEVDAQIHRTQLALRRLIESNTQSEEQRLEWTRESAEATTDAQ
                     NLGISLLLDLIGAHVDHLAETNKEEREQVFNRLLNRAEADGRKRSLHTAHGILLNRKE
                     ELDRLQTNLERVADLHDLRVKVQESENPTALESFWDLASRIKKVEELAGPGEDLIEAA
                     YTIYRQAISFENLAVIQANQEKSLQAAAGLRRYINRLYAQKRALSKPRPRGQRRTRVS
                     NP"
     gene            complement(5266..7884)
                     /locus_tag="VIT19_11665"
     CDS             complement(5266..7884)
                     /locus_tag="VIT19_11665"
                     /inference="COORDINATES: protein motif:HMM:NF041518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor Q domain-containing protein"
                     /protein_id="HEY5839685.1"
                     /translation="MKRKLAAFLLTIGLLMSAFAGVPRTASSKSSLNALNKHASRYSA
                     TLLPMLVTNLDVDRTDDTAAATACTPALNDCSLRGAIINANSDPGVDPIVINLQPATT
                     YSLTLPNATQENAAATGDLDITTTLHSVTILGGGSSTVIDAAGLTSGDMHDRAFQITG
                     SGVTVTFQDLTIRNGQAADDGTSGASTNPTSQNSIRAGGGILNGAGIDVNQQAVTGGG
                     SVTLDGVTIESCQILGKGDDQVNQDRRLEAWGGGLASLGTTGNVIITGTTFTGNTALG
                     GNGGNFNNGAGSSVRGGSIFFGGGTLNIQGSRIDSSSATGGNGGNGPGNQSNGGAGGT
                     AQGGGAWIAGTATINNTTFESCAANGGNTGTGQNGSNTAADSGGGALFSTGNVTVTNS
                     TFNLNSANGGDSGDTFGPDCFGAHQSGDGGAARGGAIQADAGSLIINTATFANNSANG
                     GNGGDGGPTNVGTCAQSSHGAGGLAHGGAITNTNTATVNIKHGTISGNSAQAGNSGVN
                     QAGATLPLRLVAEGTGGGIRVGTAGVTLENTIIANNTAANGTGDTTGAPTPGPDVDGT
                     VTSNGHNLLGNATKALGFTGPGDLIGANPNLAPLANNGGPTETMELLPGSDAIDAGVA
                     AGSTFDQRGLPRTVNDPGVPDEATSDGTDIGAFETEVPCLLDCPEDISVPNDTDECGA
                     VVEYEEPANDACGTVTCDYPSGSFFPVGETTVTCTSTAGPECTFTVTVTDEQAPGITT
                     VGTLSMWPPNHQYETFDVSDLVTGASDNCDASVGVGSVVVTSVSSDEVEDAVGGGDGN
                     TLNDIVIAGDCKSVQLRSERMGGGNGRVYTITLKVTDTSGNVSTATVKVTVPHSQNGV
                     AAVDDGPSYTVMSGCP"
     gene            complement(8091..8167)
                     /locus_tag="VIT19_11670"
     tRNA            complement(8091..8167)
                     /locus_tag="VIT19_11670"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8131..8133),aa:Met,seq:cat)
     gene            complement(8356..9159)
                     /locus_tag="VIT19_11675"
     CDS             complement(8356..9159)
                     /locus_tag="VIT19_11675"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839686.1"
                     /translation="MADKSRKVLSFPQPVPAKADYQRVKSNYSIREIKQMFGLSERTI
                     RRWTETGIIQAAPSANVEEVTYDFQALTLFRRVRDMRTQGLTIKQIEAELQGQLSLFR
                     AEVGQVQVSRLLTPFEEALLLHEQGDTQAVEFYREAIAAGDNVAEAYCNLGIIDLDRG
                     NMVGALDNFTQSLKHDPRHVEAHYNLANLYYDAGDFPLARLHYEAATQIEPNFSLVYY
                     NLALVYHRLANVVGARQALHRYKELEPGDEEIELVDQLLKAMELGRPAT"
     gene            9930..>10208
                     /locus_tag="VIT19_11680"
     CDS             9930..>10208
                     /locus_tag="VIT19_11680"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY5839687.1"
                     /translation="MPKQHQEKPGLESKVTPRPRYEAPNYKGADKLAGKVALITGGDS
                     GIGRAVAVLFAREGADVAFTYLKEEESDARETKQAIEREGRRGLMMTME"
BASE COUNT         2180 a         2955 c         2840 g         2233 t
ORIGIN      
        1 tcgtgctcag tcttcatcgt cggatattcg tcgagcgagc ggttcttcca ggcatgccac
       61 atcgcgggcg cggcttcgga ttgaacggcg atcacttgca cgttcggctt cagatgtttt
      121 gccacgatgc agttccccga cgcacaactg cccccgccgg ccggcgccag aataacgtca
      181 acgtcaggca agtcttcaaa tatttccaga ccgattgtcg cgacccctgc gatcaacttc
      241 ggctcattcg ctgaatggac gtaacgatag ccttccgttt cagctacgcg ttcggtttcc
      301 aggcgagctt cgtcgaagtc gcgaccgtgc agacgcactt cagcgccgag cgcgcgcatc
      361 gcctgcatct tcgtttcgtt gacgttctca gccggcgcgt aaatgatcac aggcacgccg
      421 aacaaacgac ccgcgtatgc gatcgactgg ccgtgattgc cggtgctggc ggtgactatg
      481 ccggggcgct tcttttcttc aggggtgccg accagattta ctccgcctcg caccttaaac
      541 gcgccgatgg gttgcacgtt ctcgcacttc aggtagtaat cacagtcgag cagtgccgaa
      601 agtttttcgc tgcgcacgag cggcgttttc ggcaggtacg gcgcgatgaa ttcgcgcgcg
      661 gccagcacat catcaaaagt taccggtaaa gttgattcgg tctttgctgc agttgtcatg
      721 atttttcagg attcagtggt cgccgatttt aggttacggc ttcggttcgt ttcttccgtc
      781 aaacgtctca gtctcgccgc atgttcagca gtcaaattag caccgtcaga atcggtacgc
      841 acgcctccgg cgtgatcagc aggccagcgg cccgcgtatc gccaactcca attgtcacta
      901 gtcgtattcg gcgtgttcat gcgcgcttcg gaaccaagcc cgagcacgtc ctgaagcgga
      961 atgatcgttg tgccggcgac tgatgccagc acggcgtgaa taaaatccca gttgatctca
     1021 cgaccctcgc tctgcaaata attcaggcaa aactctcgcg ttttcccggc gtccgttgtg
     1081 ttcatctcac ttagctgatt gaaccagccg gctgttgtgt cgttgtcatg cgttcccgta
     1141 tacgcgacca catcccggtc gaagttctct ggcaaattaa cgttgtcttt ctcgccgctg
     1201 aacgcgaatt gaagcacgcg cattcccgga aagccgaatt cttttctcaa ctcgacaacg
     1261 tccggcgtaa ttacccctaa gtcttcggcg ataatagcta cctcgcccag cgcgttacga
     1321 accgcggtga acaattctct tcccggtgtc tcgacccact cgccattttg cgccgtcgtt
     1381 tcgcccgccg gaatctccca acatgcggca aagcctcgaa agtgatccag ccttaccagg
     1441 tcgaataatt gaaagctcgc gcgcagccgc tcaatccacc acgcgaaacc gtcttcgcgc
     1501 atgcggtccc agttgtaaag cggattgccc cagaactgtc ccgtctcgct gaagtaatcc
     1561 ggtggcacac ccgcgacgac tgttgggcgt ccatgctcgt cgagcttgaa ctgctcgcgg
     1621 ttcgtccaaa catcgacaga gtcatgcgcg acgaagatcg gcacatcgcc aatgatgcga
     1681 atgcctcgct gattacaaac cgctttcagc gcatgccact gtttgaagaa tagatactga
     1741 aagaacttct gtgcatcgat ctcgtcgcgc agttcaatcc gcgcgcgtga taatgcttcg
     1801 ggttcacgca tggcgagtgg acgatcccat tcgcgccagg ccttgccgcc gttcgctttc
     1861 ttcagcgcct gaaacagcgc gtaatcatcg agccatgacg cgttctcttg atcgaaagac
     1921 tcaaacgact cgcgcaaagc attgtcgctc gcctgaaatc gttcgaatgc tcttctgaga
     1981 aacgcgttct tcgtttttct cgtcttatca aaatcgacgc gctcagtttc gtgtaatgcg
     2041 aggtcaacca gatcgctttt ctcgagcaat ccatcttcaa ctaacttttc cggactaatt
     2101 aggagggtgt ttccggcaaa tgcggagtaa gagaaataag gcgagccacc ctcgtctgtg
     2161 ggcccaaggg gcagcacctg ccaaagactc tgaccactcg cgacgagaaa atccgcgaag
     2221 cgataagcct cgttaccgag atcgcctacg ccgaagcgtc cgggcagcga ggtcggatgc
     2281 agcagaatgc cgctggctct gggaaattgc atggatggct tggcggcagg ataggctgtc
     2341 cgtgtagcgg gcggcaaacg gaaacctggc gtcgagctgt tgttagatca tgtgcaggac
     2401 aaggtttctg atgaatcgga actaaaggcg tatagtgcag gcatgaaata cctcacccga
     2461 cgttttccgc cgtgtatcgc aagatcggcg ttgcagtgcc gcctcgcaaa cggaattatc
     2521 caattgcatt atgcctctgt gctgatcctg gttctggtaa cttccggact cctggcgcaa
     2581 gcacgcgcca ctccggccgc tctcaataag aactctgttc cggcggttgg caaattgaag
     2641 gtttgggtgc cggccgggat tataggggac aactattggg tctacataaa tggagatctg
     2701 acaagtgcgc cgccgcatgg gccaacaaac ccgagaagcc cttacttcat gacggtatct
     2761 gcgagcactg ttggcagcca gccggaaacg aggtatggct gggatctttt caccaaagat
     2821 ggcgtcgtcc tgagcatgcg tcatgaagag tatgaccacc gtctcagcgc ctatctcaaa
     2881 tctgcatcag gggacgagct acgcgtcttc cgccccttcg agctttcgct tgcgccgggc
     2941 acatacactg ttgagctcgc gatcctttca aaggcaccga gctattacga ttcaacgggg
     3001 atcttccctt ttgtgattac tcggaaatat gttgctgatg tccagtcggg tcagacgaca
     3061 caactatatc cgggtgttcc ggactattgg tacgatcccc tcggaccctt tccggttcgc
     3121 gccttccgta agttttgcac cgggagccca gagccggatt cgaagcgaat cctacaactg
     3181 gtaagcgcct acatggacga cccggtggtg cgagtactgc gccgggcgag tgcatctttt
     3241 cgttcaccat ccaccggcgt cgtggtcctt aatatgccgt ctgctcaggg cgggcctcgg
     3301 cagtttgatg cgagccagat caggcacatt gccgcaacga tttcagccaa ccatgtactt
     3361 ccgactcacc gggatgttgc tgattgccag cgcctgttcc cccagtatca ccgatcatat
     3421 ggtgagttcg acaaaatgat agacgtcgtg ggaaccgaca ttgagtcctt ccgcaagctg
     3481 gccgcggatc ttgagcgaga ccggtgagcg ctgaaagcta gacgatcgcg gtaggtacat
     3541 catccgctgc gccagccctt gtcccaggcc aacccaacgc tggtttcacc cttgtcccgg
     3601 acactgcaag gtttgcaaaa ggagagcaat gcatttcaaa tcacgcttcc tcatgagcaa
     3661 cgtcgccctt ctcgtcgtgt ttgcgtgcca gtcagtaatg gcccaggaac ctccatggtg
     3721 gaccgccgag aagaagcggt gcaacctgcc gtcaggtttg gctttggaaa cctggaagca
     3781 acaaggcggt ccgtgcaacg acggcgcttc ttctcctcct ccagtggaca atcgagagcg
     3841 cgaacgccaa ctagaattag aacttgagca gcaacggcaa ctgcagcgtc agcaggaaga
     3901 gatcgagcga aagcggaagg ccaacgaagc cgaccggcgg ggcttagatg cagcgaaccg
     3961 tggccgctgg aaagaggcag cgaacttgtt cattcaggca cttgggtatg ctcccggaaa
     4021 cgcggcgatc cgctcacatc ttgaccgggc gaaccttgca attgccgacg ttggatccgc
     4081 tgccgagatt ctggcgttgc gtcaacgaat agaggacgcg atcgcaacgg cgaatctgga
     4141 agcagcgcgg cagcagatgg aagacgaggt tgccgtgcaa cgattggcag cgctgtcaga
     4201 gagtttccgc gcccagatta ttgaggatcg acgcgtgaac agcacgaggc ctgaacctcg
     4261 cagggcccag gttttctatc ctgttttgct caagccagtt tcgcccagca acccttcggc
     4321 gagagtcctg gcgcaatatc aaccaacaat cactgaggtt gacgcgcaga ttcatcgcac
     4381 ccagttggcg ctgcggcgtc tcatcgaatc gaatacgcaa agcgaggagc aacgtttgga
     4441 atggacccgg gaaagcgcag aagccacgac tgatgcacaa aaccttggga tcagtctgtt
     4501 gctcgatttg atcggcgctc atgttgatca cttagccgaa acgaacaagg aagagcgcga
     4561 acaggttttc aaccgattgt taaaccgagc cgaagcagat ggccggaaaa ggagcctgca
     4621 tacggcccac ggaatcttat tgaatagaaa ggaagaactc gaccgtcttc aaacgaacct
     4681 ggagcgcgtg gctgacctgc acgatttgag agttaaggta caggagtcag aaaatccgac
     4741 tgcgttggag agtttttggg atttagccag ccggattaag aaagtggaag agcttgccgg
     4801 accaggtgag gatctgattg aggccgccta cacgatctac aggcaggcca tcagcttcga
     4861 gaatcttgcg gtgatccagg ccaatcaaga gaagtcgttg caggccgccg cgggtctgcg
     4921 ccgctacatt aaccggctct acgcgcaaaa aagggcattg tcgaagccgc gccctcgcgg
     4981 ccaacgccgc acgagagtct caaatccttg acccatggat tcacaacgcc agggccggcg
     5041 gttcgacccc gcctaccatc acggttgttc ctatgatggt ttttcagaat ctatacttct
     5101 gtacggagca atgctcggcg tgattccgta agagaaaccg ccacaaccgt cacaagcgct
     5161 ttgtcgcatt cacaagatcc tgagatccgt ccagcctttc actgcgacgt tcttgtcggc
     5221 attgtgatcg aatgtacttg tgtccgccta aagtcacccc gcccgctaag gacacccgct
     5281 catgaccgtg tagctcggac catcgtccac cgcggcaacg ccgttttgcg aatgcggcac
     5341 ggtcaccttc accgtggcag tgctcacgtt acctgacgtg tccgtcacct ttaacgtgat
     5401 cgtgtaaacc cgtccgttcc caccgcccat tcgttccgaa cgtagttgca ccgacttgca
     5461 gtcgccggcg atgacgatgt cattgagagt gttgccgtct cctccgccga cggcgtcttc
     5521 aacttcatcg ctgctcacac tggtgacgac cacgctgccg acgccgacgc ttgcatcgca
     5581 attgtcactc gcgccagtga cgaggtcgct aacgtcaaat gtttcgtact ggtgattcgg
     5641 cggccacatc gaaagtgtgc cgactgtcgt gatgcccggc gcctgctcat ccgtgaccgt
     5701 gaccgtgaag gtgcactcgg gaccggccgt actggtgcag gttaccgtgg tctcgccaac
     5761 cgggaagaac gagccggacg gatagtcaca agtgaccgtg ccgcaggcgt cgtttgccgg
     5821 ttcttcgtac tcgactaccg cgccgcactc gtccgtatca ttcggcacgc tgatgtcctc
     5881 gggacagtcc aggaggcaag gaacttcggt ttcaaacgcg ccgatgtccg tgccgtcgct
     5941 ggtggcttca tccggaacgc cggggtcatt aacagtccgc ggcaggcctc gctgatcaaa
     6001 ggttgatcca gccgctacgc ccgcgtcgat cgcgtcacta ccgggcagaa gctccattgt
     6061 ttctgtcgga ccgccgttgt ttgccagcgg cgctaaattt gggttcgcgc cgatcaggtc
     6121 gccaggtcca gtgaacccaa gggccttagt cgcgttgccg agcaagttat gaccattact
     6181 cgtcaccgta ccatcgacgt caggcccagg cgtcggcgcg ccggttgtat cgccggttcc
     6241 gttcgccgca gtgttgttgg caatgatggt attttctaaa gtcacgccgg cggtgccaac
     6301 gcggatgccg ccgcctgtgc cttccgcgac caggcgcaac ggaagtgtag ctccggcttg
     6361 attgacacca ctgttgcccg cttgagcact gttaccgctg attgtcccgt gcttgatatt
     6421 gacggtggcc gtattggtgt tagtaatcgc gccgccgtgt gcgagaccgc ccgcgccatg
     6481 cgagctttga gcgcaggtgc cgacatttgt gggtccgccg tcgcctccgt tcccgccatt
     6541 ggctgaattg ttcgcgaacg tcgcggtatt gatgattaga cttccggcat cagcctggat
     6601 cgcgcccccg cgagcagcac cgccatcacc ggactgatga gctccaaaac aatccggccc
     6661 aaacgtgtcg cccgagtcgc cgccattcgc ggaattcagg ttaaaggtcg agttagtcac
     6721 ggtaacgtta ccagtactaa agagcgcacc gccgccactg tcagcggcgg tattgctccc
     6781 gttctgaccc gttcctgtat tgccaccgtt agcggcgcaa ctttcgaagg tagtgttgtt
     6841 gattgtagcg gtgccggcga tccaggcgcc gccgccctgg gcagtaccac cggcaccacc
     6901 gtttgattga ttacctgggc cgttccctcc attcccgccc gtggcgctgc tggagtcaat
     6961 tcgcgagccc tggatgttga gtgtgccgcc tccgaaaaag atcgagccac ctctgacact
     7021 ggacccggcg ccgttgttga aattgccgcc gtttccccct aacgcagtat tgccggtaaa
     7081 ggtagtgccc gtaatgatca cgttgccggt cgtgccgaga ctggcgagac cgccacccca
     7141 agcttcgagc cgtctgtcct ggtttacctg gtcgtcgcct ttccccagga tctggcatga
     7201 ttcgatggtg acgccatcga gggtgacact accgccgcca gtcactgcct gctggttgac
     7261 gtcgatgccc gcgccgttaa ggattcctcc gcccgcgcgt atcgagttct gtgatgtcgg
     7321 gttcgtgctg gcgccgctgg tcccatcgtc agccgcctgg ccatttctaa tcgtcaagtc
     7381 ctgaaatgtg accgttacac ccgacccggt aatctgaaac gcgcggtcgt gcatgtctcc
     7441 ggaagtaagg ccggctgcgt cgataacggt tgaagacccg ccccccagga tagtcacact
     7501 gtgaagcgtc gtggtgatgt ccaggtcacc cgttgcggct gcgttctcct gggtcgcgtt
     7561 gggcagtgtc aggctgtaag tcgtcgccgg ctgcaagttg ataactattg gatccacgcc
     7621 gggatcgctg ttcgcgttga tgatcgcgcc ccgcagactg caatcgttga gggcaggggt
     7681 gcacgccgtc gcagctgccg tgtcgtctgt tcgatcaaca tccaggttcg tcacaagcat
     7741 cggcaagagc gttgccgaat agcgcgatgc gtgtttgttc aaagcgttaa gtgacgactt
     7801 tgaagatgcc gttcgcggaa cgcctgcgaa cgcactcatt aaaagaccaa tggtcagcaa
     7861 gaatgctgcg agtttccttt tcatctgtgc tccttttgac gtggacggta ttttttggac
     7921 gtgtacggtc tggttttttg cacgccgcgc gggaaaatag gggggacgct gcggcgaatg
     7981 gtggcgcaca ctaatacacc tttccccccg cagtcggcaa gaagaatttt ctaatcggca
     8041 aaagttaagg ctgtttgaag aaatccgttg gtttgagtgc ggatgggatg tggtagcggg
     8101 gggcgggatc gaaccgccga ccttggggtt atgaatccca cgctctaacc atctgagcta
     8161 ccccgccaaa cgaaaccaag tttaaggttt caagtttcaa gtctcaagtc ggaagcgaag
     8221 tccaaggtcc aaagtccaag gtccaaggtc caaagtccaa agtccagcag actttgaagg
     8281 aagccgcagc tcttagtcaa cgctgactcg atattccgag gccaggacgt tggacactgg
     8341 acgttggacc ttggactaag tcgcggggcg gcccagctcc atggctttca ggagctgatc
     8401 gacgagttcg atttcttcgt caccgggctc gagttctttg taacggtgca gcgcctgacg
     8461 cgcgccgacg acgttcgcga gacggtgata gacgagcgca aggttgtagt aaaccaaaga
     8521 aaagttcggc tcgatttgcg tcgccgcttc gtagtgcagt cgcgcgagcg gaaagtcgcc
     8581 ggcgtcgtaa taaaggttcg ccaggttgta gtgagcttcg acgtgacgcg ggtcgtgctt
     8641 cagtgactgc gtgaagttgt cgagggcgcc aaccatgttg ccgcgatcga ggtcgatgat
     8701 gccgaggttg caatacgcct cagcgacgtt gtccccggca gcgatcgctt cccggtagaa
     8761 ctcaacggcc tgcgtgtcgc cttgttcatg aagcagcaaa gcttcttcga acggggtcag
     8821 cagccgcgag acctgcactt gccccacttc ggcgcgaaac aaactgagtt gtccctgcag
     8881 ctcagcctcg atctgcttga tcgtcagacc ctgcgtgcgc atgtcgcgaa cgcgacggaa
     8941 gagcgtaagc gcctgaaagt cgtaggtgac ttcctcgacg ttagccgacg gcgcagcctg
     9001 aataattccg gtttcggtcc aacgacgaat cgtgcgctcg ctcaagccaa acatctgctt
     9061 gatttcacga atcgagtaat ttgatttgac gcgttggtaa tccgccttgg ccgggacggg
     9121 ttgaggaaat gagaggactt tgcgactctt gtcggccatt cagggcctta gcgtacacga
     9181 aaatccgact atttgggtaa agttttcgga taaaacagcg gtggtcagtt gttcgtcggc
     9241 agttggcgat ttccattgtt gacgcgccct tttcataagt ttgcacgtca aagggcaacg
     9301 caccgacgac cgaccaccga cgacggacta ctgaccagcc atcagcagtt cacatagcca
     9361 agcagccaga aaaccacgat gaagataaga atcatagaga ataaaccgcc gccaaacttc
     9421 caggcgaccg cgccagccag acatcctcgc agtggtcctt ccatacatta agccaccttt
     9481 gctttagttg ggttgtggtc gatgaacttt gaaaaacagt ttcgcaccgc atgaacaaga
     9541 gcaagcaacg tgccctcatc ggaattcccg ctcactactc catgaatcgt tcaaaaccac
     9601 cgcgcgcggg ttaggtactt agcttccgcc caaaggaacg tgtacgcgtc cggtacatca
     9661 tgacggcgat tctgtttagt tttcgaaacc ggcattgagt cgtccctgcg gatattgcca
     9721 gtccgtttgt tcgtcaccca cggtgcaaaa agggtgcagt ggttgcatgt cacatcatca
     9781 tggcaggaca aacaaaaaga ccaacatcgg cgcgcgcgac tgcgcgcaag tcatcaacaa
     9841 agaagtccgt cacgcgacac ccgcgttccg cgtccacacg gacgccacac agagcggaag
     9901 ctcatcaacg gcccgaacca aaatctccaa tgcccaaaca gcatcaggag aagccgggac
     9961 tcgaatcgaa agttactcca cgtccgcgtt acgaagcgcc gaattacaaa ggcgccgaca
    10021 aactcgccgg caaagtcgcg ctgataaccg gcggcgattc cggcattggc cgggcggtgg
    10081 cggtgctctt tgcgcgcgaa ggcgccgatg tcgcgttcac ttatctcaaa gaagaggaaa
    10141 gcgacgcgcg ggaaacgaaa caagcgatcg aacgcgaagg ccgtcgcggg ttgatgatga
    10201 cgatggaa
//
LOCUS       DATDBY010000621         2245 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1499472, whole genome shotgun sequence.
ACCESSION   DATDBY010000621 DATDBY010000000
VERSION     DATDBY010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1499472"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            213..866
                     /locus_tag="VIT19_11685"
     CDS             213..866
                     /locus_tag="VIT19_11685"
                     /inference="COORDINATES: protein motif:HMM:NF019958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY5839688.1"
                     /translation="MNHLSRYDKKLEHILRTSARIFAEKSYHSTSMRDIARETEVSLS
                     GLYHYCKSKEELLYLIQDHCFGRVSERLEERIKSASDPFEKLRILIDNHLSFFAANMA
                     EMKVLSHEAESLAGDLHKHVTTKKERYARLARKILKEIQEQNGKGTGVDLTIATYALF
                     GMMNWIYNWYDPTGKLSVHQLVDNITRLFLNGFLSSSTERGGVPAPRTETMSVWRTA"
     gene            975..1787
                     /locus_tag="VIT19_11690"
     CDS             975..1787
                     /locus_tag="VIT19_11690"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY5839689.1"
                     /translation="MTTQAAQQRLIDYSVEAGVALVTLNDPPANTYSYEMMQQLDARI
                     LEARMDESVQVIVIIGAGEKFFCAGANIAMLSEVTPEFKYYFCLHANETLGRLEQTPK
                     LVVAAMNGHCVGGGLEVAMAADIRLARRGAGKMGLPEVSLGVLPGTGGTQRLARLVGK
                     SKAIELMATGELFDFEKGEQLGLVNRIIDAADGADFMKQVMDYARQFTTPNKASRAVG
                     RIKRAVQTGAEIPFESALALERELQQQLFQSEDAKEGLDAYVNKRKAEFKGR"
     gene            1794..>2245
                     /locus_tag="VIT19_11695"
     CDS             1794..>2245
                     /locus_tag="VIT19_11695"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY5839690.1"
                     /translation="MRRQSGAATALWISLLGSFDPKRCRATLATALQILMSEEHIKVT
                     EDSGIVTITLNRPERLNSFIGHMRRDLAEALEEAGSDPSVRVVIITGAGRAFCAGGDV
                     NFMAELVERNDSEEFARLLGASRRVILAIRHMNKPVIAQINGPASGAG"
BASE COUNT          532 a          584 c          662 g          467 t
ORIGIN      
        1 ttgaagatcg tgaatatgtg cgcagcctga tgaagccggt gacggaagta ggcaagattg
       61 cgaactggat cgcgccgcca acctcaggaa tcaagggcaa gccgttcgag tttgagtatg
      121 tacgattgtg agattggttc attgaatcat tgactcattg gtctcctgac cacgactcga
      181 atggttcaat ggatcaatga atcattggat cgatgaatca cttatccaga tacgacaaga
      241 agctcgagca catcttgcgt acttccgcgc gtatctttgc tgagaagagc tatcactcga
      301 catccatgcg cgatatcgcg cgcgagacgg aagtgagtct ttccggcctt tatcactact
      361 gcaaatccaa agaagagctg ctctacttaa tacaggatca ttgcttcgga cgtgtctccg
      421 agaggctgga agaacgaatc aagtcggcca gcgatccttt cgagaagcta aggattctga
      481 tcgataacca tctttcattt ttcgccgcga acatggccga gatgaaggtt ttgtcccacg
      541 aagctgaatc gctcgcgggc gacctgcaca agcacgtgac aaccaagaaa gagcgttacg
      601 caaggctcgc gcgcaagatt ctcaaggaga ttcaggaaca aaacggcaaa ggcacgggcg
      661 tcgatttgac gattgcgaca tacgctttgt ttgggatgat gaactggatt tacaactggt
      721 acgatccgac gggcaagttg tctgtgcacc aactcgtcga taacattacg cggctgttct
      781 tgaacggatt tttgtcttca tcaaccgaac gcgggggcgt gccggcgccg cgaactgaaa
      841 caatgagcgt ctggcgcaca gcgtaaaaag tggcgttaga gtaccgactt tagtcgggct
      901 cttctgtaat cgcgaaaacg cccaactaaa gttggtactc tgacgcccgt tagcgaaacg
      961 gtcgcgcgac ctttatgaca acacaagctg cacaacaaag actcatcgat tactcagttg
     1021 aagcaggcgt ggcgctcgtc acgctgaacg atccgccggc taacacttat tcgtacgaga
     1081 tgatgcagca gctcgacgcg cgcattctcg aagcgcggat ggatgagagc gtgcaggtga
     1141 tcgttatcat cggcgcaggc gagaaattct tctgcgccgg cgcgaacata gcgatgctca
     1201 gtgaagtcac gcccgagttc aaatactact tttgtctgca cgcgaacgag acgcttggcc
     1261 gtctcgagca aacgccgaag ctggtggttg ccgcgatgaa cggtcactgt gtcggcggcg
     1321 gcctggaagt cgcgatggcg gcagacattc gccttgcgcg ccgcggcgcg ggcaagatgg
     1381 gtctgccgga agtttcgctc ggcgttctgc cgggaacggg cggcacgcaa cgtttggcac
     1441 gtctcgtcgg caaatctaaa gcgatcgagc tgatggcgac gggcgagtta ttcgactttg
     1501 aaaagggcga gcaacttggt ttggtcaacc gaatcatcga cgcggcggac ggcgcggatt
     1561 tcatgaagca ggttatggac tatgcgcgtc agttcaccac gccgaacaaa gcgtcgcgcg
     1621 cagtcggtcg catcaagcgt gcggtgcaaa ccggcgccga gataccgttt gaatccgcgc
     1681 tggcattgga gcgcgagctt cagcagcagt tgttccagtc tgaagatgcg aaagaaggac
     1741 tggacgcgta cgtaaacaag cggaaagcgg agttcaaggg aaggtgatat ggagtgcgcc
     1801 ggcagagcgg agcggcgacg gcgctttgga tctcgctgct cggatcgttt gatccaaagc
     1861 ggtgtcgcgc tacgcttgcc accgcactcc aaattctcat gtccgaagaa cacataaaag
     1921 tcaccgaaga ctccggcatc gtcacgatca ctttgaaccg gcctgagcgc ctcaactcgt
     1981 tcatcggtca catgcgacgt gatctggccg aagctctcga agaagcaggc agcgatccaa
     2041 gcgtgcgagt cgtgatcatc accggcgcgg gccgcgcgtt ttgtgccggc ggcgatgtga
     2101 acttcatggc agagctggtc gagcgcaacg actcggaaga gtttgcgcga ctgctcggcg
     2161 cctcgcgccg tgtgatcctg gcgattcggc acatgaacaa gccagtgatc gctcagataa
     2221 atggcccggc ttccggcgcc ggatt
//
LOCUS       DATDBY010000622         3246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_42543, whole genome shotgun sequence.
ACCESSION   DATDBY010000622 DATDBY010000000
VERSION     DATDBY010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3246
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42543"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..433
                     /locus_tag="VIT19_11700"
     CDS             <1..433
                     /locus_tag="VIT19_11700"
                     /inference="COORDINATES: protein motif:HMM:NF014416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839691.1"
                     /translation="NLTVIAAFLTLVGASVNDTIVVFDRVRENRKLHRRESLYKITND
                     SINQTLSRTVITQGLIVLSVLAMVIFGGEVLRAFSLALLIGTVVGTYSSIAIASPIMV
                     WWERKIEAANKLATTTSARSGFQPKRADAGRKNVGKPSRAA"
     gene            840..1625
                     /locus_tag="VIT19_11705"
     CDS             840..1625
                     /locus_tag="VIT19_11705"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HEY5839692.1"
                     /translation="MFENLVESGSHSDDLKRKGSFLLGFMALYVVLIIAGLIVGILWA
                     PAYIDQQTLELTALIAPVPVQQQQQQKQEAKPEKMDVSKNVDVRRELIADVSRADLVP
                     KEVSAKASDVPPVRKGVVTMLGSGNTNAIAPVAPGAGSGSIISTGPTKVDVADAPPPP
                     PPKPTPPKAPISGGVLNGKAVRLVQPPYPAIARSARAAGQVRVQIVIDENGNVVSAAP
                     VSGHPLLQGAAVAAARASKFTPTKLSGMPVKVSGVIIYNFVAQ"
     gene            1717..2496
                     /locus_tag="VIT19_11710"
     CDS             1717..2496
                     /locus_tag="VIT19_11710"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEY5839693.1"
                     /translation="MTILTSILGTKALSLLFVLWQATPVATPAETAADHFSMTEMVKS
                     MGAVAITVVVILLIMSVYSIAIMVERYLTYTAAKKQSREFAPRVAQALKNNRIEEAIN
                     ISDKHRKSHLAMVVNSGLQEFRAHEQSSEISGNEIEASKRALQRAIAIKTAEFRRGLS
                     GLATIGSTAPFVGLFGTVFGIINAFRGMKNAETAGIAAVAGGISEALFTTALGLAVAV
                     PAVWLFNYFTGKVDGFVVEMDNSASELVDYFIKNRTKQLNP"
     gene            2599..3069
                     /locus_tag="VIT19_11715"
     CDS             2599..3069
                     /locus_tag="VIT19_11715"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEY5839694.1"
                     /translation="MQAGGGSGGLNSEINVTPMVDIMLVLLIIFMVVTPFLQQGVTVP
                     IPREMMNPDEDAAINKESSVILSVVCRPPDAPQCTPELTEVYLGKKKVTLEDMKSQVE
                     KALQNKEGKERIVYVKSGVNVSYGEVVKVINAVREKGIDKIGLVADKKKKGAAS"
BASE COUNT          708 a          827 c          935 g          776 t
ORIGIN      
        1 gaacctcacg gtcatcgctg cgtttctgac gctggtcggc gcgtcggtta acgacaccat
       61 cgtggtattc gatcgcgtgc gcgagaaccg caaactgcat cggcgcgaat cgctttacaa
      121 aatcaccaac gactcgatca accaaacact atcgcgaacg gtcatcaccc agggccttat
      181 cgttctttca gttctcgcga tggtgatttt cggaggcgag gttctgcgcg ctttctcact
      241 tgcgctgctc atcggaaccg tcgtcggcac ctattcttca attgcgatcg cgagtcccat
      301 catggtttgg tgggagcgga agattgaagc tgccaacaag cttgctacga ccactagtgc
      361 gcgttccggt tttcagccaa agcgcgctga cgccgggcgc aagaacgtcg ggaaaccttc
      421 acgcgccgcg taacagaatc ggcgggaaca taatccgtcg gctcggtttc taattgagcg
      481 tgttgttgca agtgatgggg cgtgaagtgt cgcaaacacg cgaaaacact gctttgtttg
      541 ctcttgactt tgcgcgtatt cgcggcatag actgcacccg ttgctggcca attaaatacg
      601 tttttgatcg tgcctttgcc ccaggtagtt gcgaaagcac gaggggagta cgttaagagg
      661 gccagtttat ttgtgctcgc ggtaactggc cgcaacgcgc gcggcggctt cctttctata
      721 ccgcagatca aaaggaattc gcttactttg tgttattgat ttgcaaccgt ttcttttttg
      781 aatcgctgtc gaatagatcc tgatctgacc cttttggcac cacttaggga ggactgaaga
      841 tgttcgaaaa tttagtcgag tcgggttcgc actcggacga ccttaaacgc aagggctcgt
      901 ttctgcttgg cttcatggcg ctttatgtcg tgctgatcat tgccggactg attgtcggta
      961 ttttgtgggc gccggcctac atcgatcagc aaacgttgga gctaacggcg ttgattgcac
     1021 cggtcccggt gcagcaacag caacagcaga agcaagaagc gaagcctgaa aaaatggatg
     1081 tcagcaagaa cgttgacgtg cgcagagaat tgatcgccga cgtctcgcgc gctgacctgg
     1141 tgccgaaaga agtttctgcg aaggccagtg acgttccgcc ggttcgcaag ggtgtggtaa
     1201 cgatgcttgg cagtggaaac accaacgcca tcgcgccggt tgctccgggc gcgggtagcg
     1261 gcagcattat ctcgacggga cctaccaagg ttgacgtcgc cgatgcgccg ccgccgccgc
     1321 caccgaaacc aacaccaccg aaagctccta tctcgggcgg tgtgcttaac ggcaaagcag
     1381 tgcgactcgt gcagccgcct tatccggcga ttgcgcggag cgctcgggcg gccggtcagg
     1441 tgagggtgca gatcgtcatt gacgaaaacg gcaacgtggt ttccgccgcg ccggtttctg
     1501 gccacccgct cctgcaaggc gcggccgtcg cagcggcccg ggcgtcaaag ttcacgccta
     1561 ccaagctgtc gggcatgccc gtcaaggttt ccggcgtcat catctataac ttcgtggcgc
     1621 agtaataatc gcggcgctgc cggtgaacgc cggcggcgcc acgatctgct gtaacaaagg
     1681 ttcagtttgt aacttacttt tcttggagga cctaccgtga ctattctaac aagcatcctc
     1741 ggaacgaaag cgctcagtct gcttttcgtt ctttggcaag ccactcctgt tgccactccg
     1801 gctgagaccg ctgctgacca ttttagtatg accgaaatgg tcaagagcat gggagccgtt
     1861 gctatcaccg tcgtagtcat tctgttgatt atgtcggtgt attcgattgc tatcatggtc
     1921 gagcgctatt tgacttatac cgcggccaag aagcagtcgc gggagtttgc gccgcgcgtc
     1981 gcccaggctt tgaagaacaa ccgtatcgaa gaagccatca acatcagcga caagcatcgc
     2041 aagtcgcacc tggcgatggt ggtcaacagt ggtttgcagg agttccgcgc ccatgagcag
     2101 tcgtctgaga tttcgggtaa cgagatcgag gcttccaaac gtgcgttgca gcgtgcgatc
     2161 gccatcaaga ccgccgagtt ccggcggggc ttgtcgggac tggcgaccat cggctcgacg
     2221 gcgccgttcg tcggcttgtt cggtactgtg ttcggaatta tcaacgcgtt ccgcggtatg
     2281 aagaacgccg aaacggcggg tattgcggcg gtcgctggcg gaatttcgga ggcattgttt
     2341 actacggctc tggggttggc agtcgcggtg cctgcggttt ggttatttaa ctatttcacc
     2401 ggcaaggtgg atggcttcgt ggttgaaatg gacaactcag cttcagagtt ggttgactat
     2461 ttcatcaaga atcggaccaa gcagcttaat ccttagcttc cacttgagcg gactcgcaaa
     2521 ctagcgcggt gagagcgcgt cgcgctagaa agtgtcactc ggaatggtga ggcggaaggg
     2581 gagaattttt ctatgggaat gcaagctggc ggcggtagcg gcggactaaa ttcggagatc
     2641 aatgttactc cgatggtcga tatcatgttg gtgcttttga tcatctttat ggtggttact
     2701 cctttcctgc agcagggcgt cacggtgcca attccgcgtg aaatgatgaa tccggacgaa
     2761 gatgcggcga tcaacaaaga gtcttcggtg atcctttcgg tggtttgtcg cccgcccgac
     2821 gctccccaat gtacccctga gttaacggaa gtttacctcg ggaagaaaaa ggtgaccctt
     2881 gaagatatga agagccaggt tgaaaaagcg cttcagaaca aggaagggaa agaaagaatc
     2941 gtttacgtta aaagcggtgt aaacgtcagt tacggcgaag ttgttaaagt cattaacgcc
     3001 gttcgcgaaa aaggtattga taagatcggc ctggtggccg ataagaaaaa gaaaggcgct
     3061 gcttcctagc gtcgcgatta attagcgcga cttctctttc tttttgaatc gaggttaacc
     3121 tatgtcaatg tcatcaggcg ggggcggtaa tcgcgccgta ccatatatca acgtcacacc
     3181 attaatcgac gtgttattgg tgttgctgat catctttatg gtgattacgc cgctaaagcc
     3241 aacgcg
//
LOCUS       DATDBY010000623         3253 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_888118, whole genome shotgun sequence.
ACCESSION   DATDBY010000623 DATDBY010000000
VERSION     DATDBY010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3253
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_888118"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1003)
                     /locus_tag="VIT19_11720"
     CDS             complement(<1..1003)
                     /locus_tag="VIT19_11720"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase"
                     /protein_id="HEY5839695.1"
                     /translation="MKRRDFMISSAVAGVALASERMVKANAPTMLIPAAVKPLVVASS
                     NGNRFKNGGDVTCVQKAYSMITKGEDVLDALVAGVNIVELDPLDDSVGYGGLPNADGV
                     VQLDSSVMHGPRKQAGAVACLEGVRTPSLVAKAVSEQTDHHLIVGKGAQDFARGMGFK
                     IEDDLNTANSRARWIEWKRRIDPLHYLDPKKRAEAGRRATEQMLAEGLLRAENLHGTI
                     NCDGINAKGEICGVTTTSGLAWKISGRVGDSPILGAGLYVDGSVGAAGSTGRGEANLY
                     NLCSYLIVEEMGRGAHPKDAGMTALKRIQANTIEKRLLNSRGLPSFGINFYILNAKGE
                     "
     gene            complement(1066..>3253)
                     /locus_tag="VIT19_11725"
     CDS             complement(1066..>3253)
                     /locus_tag="VIT19_11725"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5839696.1"
                     /translation="RVPNLLKQLAILFTAFCASAISATAQQPQNQNPDVIRVNTSLVQ
                     TDVMVFDKQGKFVDKLKREQFVLKVDGKPREISFFELVKAGSSNEEAQLAAARGVASN
                     AGAPAPLDRGRLVFFFIDDLHLSEESMHHTRKLLSQFVDREMGQNDQVALIAASGQIR
                     FLQQLTDNKSVLLKAVERVRSRPFKSRDYQSPPMSEFQALRIDQGDRDVLDVFIDEAL
                     RENPLLGRARIEEDVRGRASAILRMAALGTTTTLASLQWVMEKFRSAPGRKLLFLLSD
                     GFILDSRNSDSYARLRKVTASAAASAFVIYSIDARGLATGQSDASTPVTFDPSGRMSR
                     GTMGEIGASQDGLHALANDTGGRAFFDSNALFAAVTKGLNEASVYYLLAWRPDPNEDL
                     NPKQRRLELSVIGRPDLNVRSRNSVGETPEAATKKAAPAAGVTTRTAEVSKALQAPFP
                     KSGFPVDVTLNVMNSSQHGDVLITSVSLDPASLHFENKAGVPTGAILLSGLVLNDEGK
                     VLDSFNKRLTVRAKSAQDTVPPNITYTNYLSLKPGLYQVRVAAADEHGGPTGSAWDWI
                     EVSDFSAKKLALSTLFVGERRAQTNTSDSPEAETDPLSAQVNLNVARRFASSSYLRLT
                     TIVYNAASGPGLTTSNSNTLPTGGASSAKPDLAVQIQVFRDGEPVITDPLHRISTEGA
                     TDMARIPYAADLNLAGLAPGKYVLQLTVIDRIAKTTASQRVRFQVD"
BASE COUNT          665 a          965 c          911 g          712 t
ORIGIN      
        1 actcaccttt cgcattcaga atgtaaaagt taatcccgaa gctcggcagc ccgcgactgt
       61 tcagcagacg cttctcgatc gtatttgcct ggattcgctt caacgccgtc atgccggcat
      121 ctttcgggtg cgcgccgcgc cccatttctt cgacaatcag gtatgagcac aagttgtaaa
      181 gattcgcttc gccgcgccca gtcgatccgg ccgcgccgac actgccgtca acatacaagc
      241 cggcgccgag aatgggcgag tcgccgacgc ggccggaaat cttccacgcc aggccgctgg
      301 tcgtcgtgac gccgcatatc tcgcccttcg cgttgatgcc gtcgcagttg atcgttccgt
      361 gcaggttctc tgcgcgcaaa agtccttcag ctaacatctg ttcagttgcg cggcggccgg
      421 cctcggcccg cttttttgga tcgagatagt gcaaggggtc gatgcgacgc ttccattcaa
      481 tccacctcgc gcgcgagttg gccgtgttca agtcatcttc gatcttaaat cccatgccgc
      541 gcgcgaaatc ctgcgcgcct ttgccgacaa tcaaatgatg atcagtctgt tcgctgacag
      601 ctttcgcgac gagcgaaggc gtccgcacgc cttccaaaca ggcgacggcg ccggcctgtt
      661 ttcttggccc gtgcatcacc gatgagtcga gctgaaccac gccatcagca ttcggcagcc
      721 caccgtaacc gacgctgtcg tccagcggat ccaactcaac gatatttacc ccggcgacca
      781 gcgcgtcgag gacgtcttca cctttggtga tcattgagta cgctttctgc acgcacgtca
      841 cgtcaccgcc gttcttgaat cggttgccgt ttgatgaagc aacgactaaa ggtttgaccg
      901 ctgccggaat cagcatggtc ggcgcgttag ctttcaccat gcgttcggaa gccagggcaa
      961 cgccggccac ggcgctgctg atcatgaaat cacgacgttt catcgcagct taacctcgga
     1021 ttgtttatcg ggcacgcggg ggacaagcta agactaaacc cgcgttcagt caacctggaa
     1081 gcgcacgcgt tgtgaagcag tagttttggc gatgcgatcg attacggtga gttgcagcac
     1141 gtatttaccg ggggccagcc ccgcgagatt aaggtccgcg gcgtaaggaa ttcgcgccat
     1201 gtccgtcgcg ccttccgtgc ttatgcggtg tagcggatca gtgatcaccg gttcgccatc
     1261 gcgaaatacc tgaatctgca ccgccagatc gggtttggcg gacgacgcgc cgccagtggg
     1321 caaagtattg ctattactcg tcgttaagcc cggcccgctg gcggcgttgt agacgatcgt
     1381 cgttaggcgc agatacgagg aggaagcaaa ccggcgcgcg acattgagat tgacctgagc
     1441 tgacaacggg tcggtttcgg cttcaggcga gtcgctggta ttagtctgag cccttcgctc
     1501 accgacgaaa agtgtactca acgcgagctt ctttgcagaa aaatccgata cttcaatcca
     1561 gtcccatgca cttcccgtcg gaccgccgtg ttcatccgcc gccgcgaccc gcacctggta
     1621 caggcccggc ttcaagctca agtagttggt ataagtgatg ttcggcggca cggtgtcctg
     1681 ggcggacttc gcgcgcaccg tcaatcgctt gttgaaagaa tccagcacct tgccttcgtc
     1741 gttcagaacc agacctgaaa gcagaatggc cccggtagga actccagctt tattctcaaa
     1801 atggagcgac gcgggatcca gactgaccga cgtaatcagc acatcaccgt gctgcgagct
     1861 attcatgacg ttcagcgtta cgtcaactgg aaagcctgac ttcggaaatg gggcttgtag
     1921 agctttgctg acctcggcag ttcttgtagt cacaccggcc gccggcgcgg ccttctttgt
     1981 tgcggcttcg ggcgtctcac ccacgctatt tcttgatcgc acgttcaaat caggacgacc
     2041 aatcacactg agttccagcc gtcgctgttt cggattgaga tcctcgttcg ggtctggccg
     2101 ccacgccagc aggtaataaa ccgaggcttc gttcagcccc tttgtgaccg cggcgaacaa
     2161 tgcgttgctg tcgaagaaag ctctccctcc cgtgtcgttc gccaacgcat gcagtccgtc
     2221 ttgcgaggcg ccgatttcac ccatcgttcc acgcgacatc cgtccggaag gatcaaaagt
     2281 cacaggcgtg ctcgcatcgg actgcccggt ggccagcccg cgggcatcga ttgagtagat
     2341 tacgaacgca gacgccgcgg ccgaagcagt caccttgcgc aggcgcgcat acgagtcaga
     2401 gtttctggaa tcgagaataa aaccgtcgga taacaggaac agcagcttgc ggccgggcgc
     2461 cgaacgaaac ttttccatca cccattgaag cgaagccaga gtggtggttg tgcccaacgc
     2521 ggccattcgc agaatcgccg acgcacgccc ccgtacgtct tcttcgattc gagcgcgacc
     2581 gagcagtgga ttttctcgca acgcctcatc gatgaagaca tcgagcacat cgcggtcgcc
     2641 ctgatcgatt cgcagcgctt gaaactctga catcggtggc gactgatagt cgcgcgattt
     2701 gaacgggcgc gaacgcaccc gctcgaccgc cttcaggagg acagatttgt tgtcggtgag
     2761 ctgctggaga aaacgaattt gaccgctcgc ggcgattaac gccacctgat cgttttgtcc
     2821 catctcgcga tcgacaaact gtgacagcag ttttcgcgtg tggtgcatgc tttcttcgga
     2881 taggtgaaga tcgtcgataa agaaaaacac caggcgtccg cgatccagtg gcgccggcgc
     2941 accggcgtta gaggccacgc ctcgggcggc cgcaagctgc gcctcctcgt tcgagctgcc
     3001 ggctttgact agctcaaaga aagaaatctc gcggggcttg ccgtcaacct tgagcacgaa
     3061 ctgttcgcgc tttagcttgt ccacaaattt tccctgctta tcgaagacca taacgtccgt
     3121 ctggacgagg gaagtgttga ccctgattac atctggattt tgattttgcg gttgttgtgc
     3181 ggtcgcggaa atggcagacg cgcagaatgc ggtgaagagg attgcgagct gtttgagcaa
     3241 gtttggaact cgc
//
LOCUS       DATDBY010000624         2957 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1435447, whole genome shotgun sequence.
ACCESSION   DATDBY010000624 DATDBY010000000
VERSION     DATDBY010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2957
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1435447"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VIT19_11730"
     CDS             <1..333
                     /locus_tag="VIT19_11730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839697.1"
                     /translation="SNPQSAIRNPQSVMGFRMFRPAWRAEVQTEFGKPTRLSASSERS
                     AGKVRGVVICAGGPWRSSGEWWRQDVWARDEWDLAVIDPASPESEILCRVYRDLSSEQ
                     WFVAGIYD"
     gene            429..>2957
                     /locus_tag="VIT19_11735"
     CDS             429..>2957
                     /locus_tag="VIT19_11735"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004225.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HEY5839698.1"
                     /translation="MQKNIDIDSRKEQQKPLPTVHRTPPTGNRPLPTDYVELHARSAF
                     SFLRGAATPEELVAAGAELNMPAMALLDNDGVYGAARFHLAAQKVGIKAHIGAEIQVS
                     GFRFRVSGSKPESTARNSRFQIRNSKFQIPNSAFTLPLLIRNRTGYQNLCRLITLMKM
                     RVPKHAKPGECAVTLDELAAHADGLVCLTGAEDGPLFSDGSGVGVACARGGLGPPLHI
                     QAADRLIEIFGRENVYAELQRHFNRAEEARNHAVMEIARKLKLPLLATNGVCYATRAQ
                     RQVADVFTCIRNHVRLETAGRLLSINSERFVKSPKEMAELFADLPEAIANTVELSSRL
                     EFTLKDLGYEFPKYPVPPDETMTSFLRQRTYEGAHLRYGRNGEFARAQKQIEHELKLI
                     EKLKLEGYFLIVWDIVEFCKRQGILIQGRGSAANSAVCYSLGITAVDPVGMELLFERF
                     LSEERGEWPDIDLDLPSGDQRERAIQYVYQRYGPRGAAMTANVITYRGRSAAREVGKV
                     LGFDDETLGRLSGLVHTWEWKDPKDTTERQFKDAGLDLRDKRIKKFFQLYQAVRDLPR
                     HLGQHSGGMVICQGQLDSVVPLEPAAMPGRVVVQWDKEDCADLGIIKVDLLGLGMMAV
                     LEETIQIIRDDYKEAVDLAHLPQDDTAVYTALQQADTIGMFQIESRAQMSCLPRLRPQ
                     KFYDIVVQVAIIRPGPIVGNMVNPYLERRLGRAPVRYAHPDLEPVLKRTLGVPLFQEQ
                     LLRMAMICADFTGGEAEELRRAMGFKRSEQRMKDIETKLRRGMTRKGISGKIQAEIIE
                     QIASFALYGFPESHAASFALIAYASAYLKCHYLAAFTAATLNHQP"
BASE COUNT          680 a          759 c          897 g          621 t
ORIGIN      
        1 tcaaatccgc aatccgcgat ccgcaatccg caatcggtta tgggcttcag aatgtttcgg
       61 ccggcgtggc gtgcggaggt gcaaacagaa tttggaaagc cgacgcgcct cagtgcgagc
      121 agcgaacgat cagccggaaa agttcgcggt gtggtgatct gcgccggcgg cccctggcgc
      181 tcatcgggag agtggtggcg tcaagatgtt tgggccagag atgaatggga cttggccgta
      241 atcgatccgg cttcacctga aagcgagatc ctgtgtcgcg tctatcgcga cttatcgagc
      301 gagcaatggt ttgttgccgg aatttatgac tagccgtgag tagtgagtag tgagtagtga
      361 gcagtgagca gtgagcagta ggcagtaggc agtaggcagt aggcagtagg cagtaggcag
      421 tcaaagcaat gcaaaaaaat atcgacatcg attcacgaaa agaacaacaa aaaccactgc
      481 ccactgtcca ccgcacaccg cccactggta accgcccact gcccactgat tatgttgagc
      541 tgcacgcgcg gtcggcgttc agttttcttc gcggcgctgc gacgcctgaa gaattagtcg
      601 ctgccggtgc tgaattgaac atgccggcga tggcgctgtt ggataacgat ggcgtttacg
      661 gggcggcgcg atttcatttg gcggcgcaga aggttgggat taaagcgcac attggggcgg
      721 aaattcaggt ttcgggcttc aggtttcggg tttcaggttc aaaacccgaa agcacggcgc
      781 gaaattccag atttcaaatt cgaaattcga aattccaaat tccaaattca gccttcactc
      841 ttccgctcct gattcgaaat cgcaccggct atcaaaatct ctgtcgcctg atcaccttga
      901 tgaaaatgcg tgtgccgaag cacgcaaagc cgggtgaatg cgcggtcacc ctcgacgagt
      961 tggcagcgca tgcggatgga ttggtttgtt tgacgggcgc ggaggacggg ccgctgtttt
     1021 cggatggttc aggcgtaggc gttgcctgcg ccagaggcgg gctgggcccg cctctacaca
     1081 ttcaagctgc cgatcggcta atcgagatct tcggtcgtga aaatgtctat gccgaactgc
     1141 aacgtcactt caaccgcgcc gaagaagcgc ggaatcatgc ggtgatggaa attgcacgca
     1201 agctgaaact gccactgttg gcgacgaatg gcgtttgtta cgcgacgcgc gcgcaaaggc
     1261 aagttgccga cgtcttcacc tgtattcgca atcacgtgcg gctggaaacg gccgggcggc
     1321 tgctttcgat caattcagaa cggttcgtga aatcgccaaa agaaatggcc gagctgtttg
     1381 cggatttgcc ggaagccatc gcaaacacag ttgagttgtc atcgcggctt gaattcacgc
     1441 taaaagatct cggctacgaa tttccgaagt atccggtacc gccggacgag acgatgactt
     1501 catttctgcg ccagcgaact tacgaaggcg cacacttgcg atacggtcga aacggcgaat
     1561 tcgcacgcgc acaaaaacag atcgagcacg aattaaaact aatagagaag ctaaagcttg
     1621 aaggttattt cctgatcgtt tgggacatcg ttgagttctg caagcgccag gggattctca
     1681 ttcagggtcg cgggtcggcg gccaacagcg cggtttgcta tagcttggga atcacggccg
     1741 tcgatccggt cggcatggag cttctgttcg aacgatttct ttcggaagag cgtggcgagt
     1801 ggccggacat cgatctggat ctgccaagcg gcgaccaacg tgagcgcgcg attcaatacg
     1861 tttaccagcg ctacgggcca cgtggcgcgg cgatgaccgc gaacgtgatc acttatcgcg
     1921 ggcgttcggc ggcgcgcgaa gtcggcaagg tgctcgggtt cgatgatgag acgctcggcc
     1981 ggctgtccgg cctggtgcac acgtgggaat ggaaagatcc gaaggacacg actgagcggc
     2041 aattcaaaga cgcagggctc gatttgcgcg ataagcgcat caagaaattt ttccagcttt
     2101 accaggcggt gcgggatctg ccgcggcatt tgggccagca ttccggcggc atggtgattt
     2161 gtcaggggca gcttgattcg gtggtgccgc ttgagccggc ggcgatgccg ggccgcgtcg
     2221 tggtgcaatg ggacaaagaa gactgcgccg acctcggcat tatcaaggtg gatctgctcg
     2281 gcctcggcat gatggcggta cttgaagaga cgattcaaat catccgcgac gattacaaag
     2341 aagcagtcga tcttgcgcac ttaccacagg acgacacggc cgtttacaca gcgctgcaac
     2401 aagccgacac gattggcatg tttcagattg aaagtcgcgc gcagatgtct tgtttgccga
     2461 gacttcggcc ccagaagttt tatgacatcg tggtgcaggt tgcgatcatt cggcccggac
     2521 caattgtcgg caacatggtc aatccgtacc tggagcgacg gctgggccgc gcgccagtca
     2581 ggtacgcaca tcctgacctc gaaccggtgc tgaaacgcac gttgggtgtg cctctgtttc
     2641 aggagcaact gctgcgaatg gcgatgatct gcgcagactt taccggcggc gaagctgaag
     2701 aattgcggcg cgcgatgggc ttcaaacgtt cggaacaacg catgaaagac attgaaacta
     2761 aactgcggcg cggaatgacg aggaagggaa tcagcggaaa aattcaagcg gagattatcg
     2821 aacagatcgc gtcattcgcg ctgtacggat ttccggaatc gcacgccgcc agctttgctt
     2881 tgattgctta cgccagcgct tatctcaaat gtcactacct ggcggcgttc accgcagcga
     2941 cgctcaacca tcagccg
//
LOCUS       DATDBY010000625         2560 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_275905, whole genome shotgun sequence.
ACCESSION   DATDBY010000625 DATDBY010000000
VERSION     DATDBY010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_275905"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..625
                     /locus_tag="VIT19_11740"
     CDS             <1..625
                     /locus_tag="VIT19_11740"
                     /inference="COORDINATES: protein motif:HMM:NF014600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEY5839699.1"
                     /translation="LNISHNASSVNFAATIAGWQNQKGLNASGVLDEESWMALVAQWQ
                     ANRLKDKTPATPDQLLLAPTSDFYDPSRLDELRQVERNTYAAYKAMLAAAIADPTLKL
                     ARTSATELAPTEKFFKIISSFRSREYQEKLRRESPNAGSAGLALNSPHFTGRALDIYV
                     GGDPVDTKDANRAIQVNTPAYKWLVKNAERFGFRPYFYEPWHWEYVR"
     gene            complement(722..952)
                     /locus_tag="VIT19_11745"
     CDS             complement(722..952)
                     /locus_tag="VIT19_11745"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY5839700.1"
                     /translation="MKTGSSKWLKTKGRELRNFHWQRGYGAFSIGQSNVAELKRYIRN
                     QKQHHRRITFEDEYRKFLRRYQIDFDERDVWD"
     gene            complement(988..1173)
                     /locus_tag="VIT19_11750"
     CDS             complement(988..1173)
                     /locus_tag="VIT19_11750"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY5839701.1"
                     /translation="MPQSLSSVLIHLVFSTKNREPFITPVIEAELHPYMATIFREHDS
                     PSLIIDGTTDHVLRSSR"
     gene            complement(1240..1512)
                     /locus_tag="VIT19_11755"
     CDS             complement(1240..1512)
                     /locus_tag="VIT19_11755"
                     /inference="COORDINATES: protein motif:HMM:NF021253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module protein"
                     /protein_id="HEY5839702.1"
                     /translation="MSSNAEKILQEALNLPPQDRAEVLERLLATFQEPPDPEVDKLWA
                     QEAEDRIDAYDRGEIGSVSAEDVFARIERHRLKRQRRVVQQPRPTA"
     gene            complement(1611..>2560)
                     /locus_tag="VIT19_11760"
     CDS             complement(1611..>2560)
                     /locus_tag="VIT19_11760"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY5839703.1"
                     /translation="PVEAAVIAKRFRDTPIKLVWPREDDVQGGYYRPMHAHRVEIGIG
                     ADGMPAAWRHVIVGQSLVVGTPFAAMMIKNGVDGTVVEGVEDTHYNLPNFHVSAHHPT
                     VNVPVLWWRSVGSTHTAFVMETLVDELAARAKMDAFAYRRKLLKPEAKKLRAVLDLLD
                     EKTAGWRNSLPKGRAAGIAAHECFNTAVACAVEVSIVNKRPRIHRATVAVHCGLAVNP
                     LSIESQFQGGLGFGLNQLMAQGAITLKDGRVEQSNFDGFTPAYIGDVPVTVDVHIVPS
                     ADPPTGCGEPPVPVISPAVVNALTRLTGKRYRKLPLTEI"
BASE COUNT          592 a          759 c          656 g          553 t
ORIGIN      
        1 actaaacatc tctcacaacg cttcttcagt taatttcgcg gccacgattg ccggatggca
       61 gaatcagaag gggttgaacg cgagcggcgt gctggatgaa gaatcctgga tggccctggt
      121 cgcgcagtgg caggcgaacc gcctgaagga caagacacca gcaacacctg atcaactgct
      181 gctcgcgccg acttcggact tttacgatcc gtcgagactt gatgagcttc gccaggtcga
      241 gcgcaacacg tacgcggctt acaaagcaat gctcgcagcc gcgattgcag atccgacttt
      301 gaaactggcc cgcacttctg cgactgagct ggcgccgacc gagaagttct tcaagatcat
      361 ttcctctttc cgctcgcgcg aatatcaaga gaagctgcgg cgtgaatcac ccaatgccgg
      421 tagcgctggt ctcgctctaa acagtccgca ctttacgggt cgcgctctgg acatctacgt
      481 tggcggcgat cccgttgaca cgaaagatgc caaccgcgcg attcaggtca acacccctgc
      541 ctacaaatgg ctggtgaaaa acgccgagcg cttcggcttc cgcccatact tctacgaacc
      601 ctggcattgg gaatacgtga ggtagtgatc aagcgccaag ggcgcgacat gtaacagcct
      661 aggccaacgg cctaggtact ggccataaac aacaaacgag cgctgaaggc gcgacatcat
      721 ttcaatccca aacgtcccgc tcatcgaaat caatctggta ccgcctcagg aacttacgat
      781 attcatcttc aaaagtaatg cgccggtgat gctgcttctg gtttcgaatg taacgcttaa
      841 gctctgcgac atttgattga ccaatcgaaa acgcgccata gcctctctgc caatgaaagt
      901 ttctgagctc tcttcctttc gtcttaagcc acttcgagga gccagtcttc acctcttcga
      961 ccacatccgc gaccgaaact gttcggccta gcgcgaagag cgcagaacat ggtctgtcgt
     1021 gccatcgatg ataagcgatg gcgaatcatg ttctcgaaag attgtcgcca tgtatggatg
     1081 caactcagct tcaatgaccg gtgtgatgaa gggctctcga ttctttgtgc taaagacgag
     1141 atgaatcagc actgaagata gggattgagg catgggagtc tcctctcgac tgttgttatc
     1201 gcgcgctttc agcgctttgg gtggaaatga tctgtctacc taggccgttg gcctaggctg
     1261 ttgcactacg cgcctttggc gcttaaggcg atgccgctcg attctggcaa atacatcttc
     1321 cgccgaaaca ctccctattt cgccccgatc atatgcatcg atacgatctt cagcttcctg
     1381 cgcccagagt ttgtctactt ccggatcggg cggctcttgg aaagtcgcca gcaagcgctc
     1441 caggacttca gcgcgatctt gcggcggcag attcagagct tcttgcagga tcttctcagc
     1501 gtttgaggac attactatct cccattggtc gagagtatat cacctcgcaa taggggcgtt
     1561 agccgaacac taaggctcat ccattcggca ggccacggcc tggtgcaata ctagatctca
     1621 gtcagcggta acttccgata acgctttccg gtaagtctcg tcaaggcatt gacgactgcc
     1681 ggcgagatca ccggcaccgg tggttcaccg cagccggtcg gcgggtcggc gctggggacg
     1741 atgtgaacat cgacagtgac cggcacatcg ccgatgtacg cgggcgtgaa accatcaaag
     1801 ttgctctgct ccacgcgccc atccttcaaa gtgatagcgc cctgcgccat cagttgattc
     1861 aggccgaaac caagcccgcc ttgaaattga ctctcaatcg aaagcggatt gacggccagc
     1921 ccacaatgaa cggccacggt ggcgcgatga atcctcggcc gcttgtttac aatcgagacc
     1981 tcaacggcac aggccacggc tgtattaaaa cattcgtgag cagcaatgcc cgccgcacga
     2041 cccttcggaa gactatttcg ccagccagcg gttttttcgt ccagcagatc aagcaccgcg
     2101 cgcagcttct tcgcttcagg cttcaagagc ttgcgccgat aagcgaacgc gtccattttc
     2161 gcgcgcgccg ctaactcatc aaccagggtc tccatgacga aagcagtgtg agtgctgccc
     2221 accgaacgcc accacaggac cggcacgtta accgtcggat ggtgtgccga cacatggaaa
     2281 ttcggaagat tgtagtgagt gtcctccacg ccttccacaa cagttccatc gacaccgttc
     2341 ttaatcatca tcgcggcaaa cggagtcccc acaactaatg attgtccgac aatgacatga
     2401 cgccaggctg cgggcattcc atccgcgccg atgccaatct cgacgcgatg cgcatgcatc
     2461 ggacgatagt agccaccctg aacatcatcc tcgcgcggcc acacgagctt tatcggcgtg
     2521 tcacggaaac gcttagcaat caccgccgct tcaaccggga
//
LOCUS       DATDBY010000626         4339 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_836300, whole genome shotgun sequence.
ACCESSION   DATDBY010000626 DATDBY010000000
VERSION     DATDBY010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4339
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_836300"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VIT19_11765"
     CDS             complement(<1..245)
                     /locus_tag="VIT19_11765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839704.1"
                     /translation="MEDKQTFAIGDRVEQMCITCGEERGHIVASMTKKGKITRVSCPI
                     CASRVPYKSGTTRRTSNKVGAPYDRARTYRRGQVLMHA"
     gene            complement(303..1526)
                     /locus_tag="VIT19_11770"
     CDS             complement(303..1526)
                     /locus_tag="VIT19_11770"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY5839705.1"
                     /translation="MDFSQLGLAPAQLSACESLGYNEPTPIQRQAIPVILSGRDVIGC
                     AETGTGKTAAFLLPILQKISERAKPGLRVLVLAPTRELALQIQKNYRELNLTKANRSV
                     IAIGGANIRKQISELRQGASVLIATPGRLLDLTERQAVNLSTIEVLVLDEADRMLDMG
                     FLPAIRRVLSMLPTKRQTLLFSATMSANIEQLARSTMKEPKLIEVNQRGQAATMVEQT
                     VYHVEQHSKTALLLDLLEKEVEPFERVLVFTRTRRGAERLSHILKARDHSVDRIHADR
                     SQPQREAALREFSDGRTRVLVATDIAARGLDVDSVSHVINYDVPAAPEDYVHRVGRTG
                     RAGNQGKAITIVAPVDELSMRAIERLTGQAVKRVVPEGFGGVATVSALPVKPIAGVTR
                     PRSSTMRSFRPRRAR"
     gene            complement(1678..2073)
                     /locus_tag="VIT19_11775"
     CDS             complement(1678..2073)
                     /locus_tag="VIT19_11775"
                     /inference="COORDINATES: protein motif:HMM:NF012305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEY5839706.1"
                     /translation="MSTKLYVGNLAFQTTSQELQELFATAGTVESASVVEDRDTGRSR
                     GFAFVEMSTKEEAAAAIDQFNGKEVGGRALKVNEAKPRENRSGGGGGGRGGFGGNRGG
                     FGGNRGGGGGGRSGGGYGGGGGGSREPRW"
     gene            complement(2352..3041)
                     /locus_tag="VIT19_11780"
     CDS             complement(2352..3041)
                     /locus_tag="VIT19_11780"
                     /inference="COORDINATES: protein motif:HMM:NF024304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEY5839707.1"
                     /translation="MNELPRTQRTTLKRLPQRGSFERQQINEILDEGFICHVGFVVNG
                     EPVVIPTGYARAGDALIIHGSQASRMLRQLGQGIDVCVTVTLIDGLVLARSAFHHSMN
                     YRSVVVFGRARVIEDREEKMSALTALSEHMIPGRWDEVREPNDRELQLTTVLAIPLNE
                     ASAKVRTGPPVDDEEDYELPVWAGVIPLQMMANEPIADPRLGANRPTPRYAIEYRRTS
                     HSVQKPSETLT"
     gene            complement(3192..3758)
                     /locus_tag="VIT19_11785"
     CDS             complement(3192..3758)
                     /locus_tag="VIT19_11785"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEY5839708.1"
                     /translation="MAERETEHRRIVVETPTTRREVVQTDAVHHPDRSGISGAALAAI
                     VVGVIALATLIILFVMNQQQTANETAATQQQPSTTIVQQPAAQQPPVIIEQQAPATQP
                     PVIINNPAAGGSAPATGNGDSVVQLAIDKRLSEDATFSGLGITATVLDGKVTLTGIVQ
                     NQALKAQVERAIRNIKGVKVVDNQISVG"
     gene            4091..>4339
                     /locus_tag="VIT19_11790"
     CDS             4091..>4339
                     /locus_tag="VIT19_11790"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEY5839709.1"
                     /translation="MGPDERQQLISQYEAGYDEVLRNLAGFPPESLNAHPIPGKWSAA
                     EIVHHLADSETTSALRIRRLLVEDHPLIQGYDQDQYAAK"
BASE COUNT          910 a         1231 c         1182 g         1016 t
ORIGIN      
        1 gcatgcatca gcacttgtcc acggcgataa gtgcgcgcgc gatcataggg cgcgccgact
       61 ttgttagacg ttcgtcgcgt ggtcccgctt ttgtaaggaa cgcgcgacgc gcagatcggg
      121 caactaactc gcgtaatctt gcccttctta gtcattgagg cgacgatgtg accgcgttct
      181 tcaccacagg tgatgcacat ctgctcaact cgatctccga ttgcgaaagt ctgtttgtct
      241 tccatgatgc tccttctaag taatgctctc tgttagttgt cttgacgctt aactaacccc
      301 acttatctcg cgcgacgcgg tcgaaacgac cgcatggtgc tgctccgcgg ccgcgtcacg
      361 ccggcaattg gtttgaccgg caacgccgag acagttgcca ctccaccaaa tccttcgggc
      421 acgacgcgct tcactgcttg tcctgtcagc ctttcaattg ctcgcatgga cagctcatcg
      481 accggcgcaa cgatcgtaat cgccttgccc tggtttccag ctctgccggt gcggccgacg
      541 cggtgaacgt agtcttccgg cgccgccggc acgtcgtaat tgatcacgtg cgagacggaa
      601 tcaacatcaa gcccgcgggc cgcgatgtcc gtcgccacca acacgcgtgt gcgaccgtcg
      661 ctaaattcgc gcaaggcggc ctcgcgctgc ggctgcgagc ggtcggcgtg aatgcgatcc
      721 acgctgtgat cgcgagcttt caaaatgtgc gacaggcgct ctgctccgcg ccgcgttcgc
      781 gtaaacacga gcacgcgttc gaacggttca acctcttttt ccagtagatc gagcagtagc
      841 gccgtcttgg aatgctgctc gacgtggtaa acagtctgct cgaccatggt cgccgcttga
      901 ccacgctgat ttacttcaat caacttgggc tctttcatcg tcgaacgagc aagctgttca
      961 atgttcgcag acatcgtcgc ggaaaacaga agtgtctgcc gctttgtcgg cagcatcgaa
     1021 agcacgcgcc ggatggcggg cagaaatccc atgtcgagca tgcgatctgc ttcatccaaa
     1081 accaatactt cgatcgttga aaggttgacc gcttgtcttt cggtcagatc gagtaagcgt
     1141 ccaggcgtag cgatcaaaac gctcgcgccc tgacgtaact cgctgatttg ttttcgtatg
     1201 ttcgcgccac cgatcgcaat tacgctgcga ttggccttcg taaggttaag ctcgcgataa
     1261 ttcttttgaa tttgcagcgc cagctcgcgg gtaggcgcca gtaccagcac tcgcaggccg
     1321 ggcttcgcgc gctcgctgat cttttgcaga atgggaagta gaaatgcggc cgtcttaccg
     1381 gtgccggttt cggcacagcc gattacgtct cggccgctga ggatgacagg aatcgcctgt
     1441 cgctgaatag gtgtcggttc gttatatccg agagactcgc aagcgctcag ttgcgcaggc
     1501 gcaagtccca gttgagaaaa atccatagag tccttttgtg taggggcgac agattcgtcg
     1561 ccgagatgta ctgcaagtaa caggtcagcc cttcgtgccc gccatgatta acgctctcgc
     1621 ggaagaccgc gggggacaca aaggaactgc tttactgctc aaccgctggc tggtttgtta
     1681 ccagcgcggt tcacggctgc cgccgccgcc gccgccgtag ccgccgccgc tgcgaccgcc
     1741 accaccacca ccacgattac cgccaaagcc tccgcggttg ccgccgaagc cgccacgtcc
     1801 gccgccgccg ccgccactgc gattttcgcg tggcttggct tcgttgactt taagggcgcg
     1861 accgccgact tctttgccat tgaattgatc gatggctgct gcggcttctt ccttggtgga
     1921 catttcgacg aaggcgaacc ctctcgaacg tccggtgtcg cggtcttcca cgacactcgc
     1981 tgattcaacc gtgccggccg ttgcgaacaa ttcctgcagc tcctgactgg tggtttggaa
     2041 agcgaggttt ccaacgtaaa gtttcgttga catgtaaatt tacctttccc cttttaggga
     2101 atgaaagaag ctggcgaacg gaacgggctt cggcgaaacg gtagcggtcg aaggaccagg
     2161 ttcggatgct ctttgtaaga agagcggctt ctgaagtttg aaatcagcct gctctcgaac
     2221 catccaaaac gccggcgcta atcgtcttat gcgcggggcg catcaccgtt gatgcgcgag
     2281 agaaggatta accgggcagt atgatgcctt atttggccgt ttagttgcaa ggcggattgg
     2341 cgctggacgt gctaagtcaa cgtttcgcta ggcttttgca ccgaatgaga ggttcgacgg
     2401 tattcgatgg cgtaccttgg agtcggtctg tttgcgccga gccgcggatc ggcgatgggc
     2461 tcatttgcca tcatttgcag tggaatgacg cccgcccaca cagggagctc gtaatcttcc
     2521 tcgtcgtcaa cgggcgggcc ggtgcgaacc tttgcggatg cttcatttaa gggaatcgca
     2581 agtacggtcg tgagctggag ttcgcgatca ttcggctcgc gaacctcgtc ccaacgacca
     2641 ggaatcatgt gttcggaaag agccgtgagt gcagacattt tctcttcccg gtcttcgatt
     2701 accctggcac gcccgaagac gacgaccgac cgataattca tggaatggtg aaaggctgaa
     2761 cgcgccagca ccaggccatc aatcaaagtc acagtgacgc agacgtcaat tccctgcccc
     2821 agttgccgta gcatccgact ggcttgcgag ccatgaatga ttagcgcatc cccggcgcgg
     2881 gcatagccgg taggaatcac caccggctca ccgttaacga cgaaacccac gtggcaaata
     2941 aagccttcgt caagaatttc gttgatttgt tgccgttcga agctgccacg ctgcggcagc
     3001 cttttcagag ttgttcgttg cgtgcgggga agctcgttca taccctgagt gttaacgaga
     3061 atccgacttc aatcaagcgg gcaaaacagc agaagcgccg gagcacaagc tccgacgctt
     3121 cacaggctgg ggtgctggac gcgaccgcat aacctgccgg tcgcgcccag ggacacgaga
     3181 aactttcgaa cttaacctac gctgatttga ttatcgacga ctttcactcc ttttatgttt
     3241 cggatggcgc gttcaacctg agccttcagc gcctggttct ggacgattcc ggtcagtgta
     3301 accttaccgt ccagcaccgt tgccgtgata cccaagcctg agaacgtcgc atcttcgctt
     3361 aaccttttat cgatggctaa ctgaacgacc gagtcgccgt tccccgtagc gggcgctgaa
     3421 ccgcctgcgg ccggattatt tatgattacc ggcggctgcg ttgcgggcgc ttgttgctcg
     3481 atgatcacgg gcggttgttg cgccgccggt tgttgcacga tggtcgttga cggttgttgc
     3541 tgcgtagctg ccgtctcgtt agctgtttgc tgttgattca tcacgaataa gatgatgagc
     3601 gttgccaatg caatgacgcc gacaacgatt gcagcgagtg ctgccccgga aattccactt
     3661 cgatccggat gatgaactgc gtcagtttgt actacctcgc ggcgtgtcgt tggcgtttcc
     3721 accacgattc gtctgtgttc tgtttctcgt tcagccataa cttgttctcc aatctcaaaa
     3781 aatgaattca gatcgcaggg agagaaccct tcgttccgtg ccggtgcaaa agttattcca
     3841 aatcaatctg ccgcaatgtt gatgtaacaa acgggctttg aaacgccgtt tttcacagaa
     3901 accatgaacg gagattgatc tgtcaattga gttgaccgaa tcacttcgat tcttaaaaac
     3961 aaatcccatt gcactagaaa cagacgcacc ggctaaacct ctcacttgac gttgttgcag
     4021 caacggagta gtttccgctc gcaaattcac agtgagtatc gacggtcaca agacgaagaa
     4081 aggacttttt atgggccccg acgaaagaca acagctaatc tcgcaatatg aagcaggata
     4141 tgacgaagtt ctgcggaatt tggccggttt tccgcccgaa tctttgaacg cgcatccgat
     4201 tcccggtaag tggagcgccg ctgaaatcgt ccatcatctg gctgacagcg agacgaccag
     4261 cgctttgcga atacgtcgct tgctggttga agatcatccg ttgattcaag gctacgatca
     4321 ggatcaatac gccgcgaag
//
LOCUS       DATDBY010000627         2909 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1077916, whole genome shotgun sequence.
ACCESSION   DATDBY010000627 DATDBY010000000
VERSION     DATDBY010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1077916"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1918)
                     /locus_tag="VIT19_11795"
     CDS             complement(<1..1918)
                     /locus_tag="VIT19_11795"
                     /inference="COORDINATES: protein motif:HMM:NF023418.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminaseTgpA domain-containing protein"
                     /protein_id="HEY5839710.1"
                     /translation="MQFASYFRLTSYATIAAAALALYVAGGVGLWLLGAFTLVMIVAF
                     KLEDTRWQLSERLALAVILASIPFFYLDWQVLTPYLQIEYLETGRRGGVEVAVLSHLI
                     LFLSAVKLFQRKHDRDWFFLYLISFFTVLLAAGLTASPIFLGVLILYLLCALSTIVAF
                     EIQKARKKVTATQTRLLVPPDSTLFQKLPMRLWRRRYLETRRLPLVSVGLLLLIVTLA
                     LPFFLIAPRTASSALRRGGDGVSGFVGFSDSVTLGQIGELKRNDEIFMRVRIDEFGSV
                     PPARLRWRGVALDSFTGKAWKKSPVAERFEKKETESGFFQLGTAASRAHLTTQTFFME
                     PVDTPILFGAPRVVAVRGNLPFVRVDSEGAIQTRAHDQERVVYRVYSDTTEPSAAALR
                     NDRLQYLAESARYLELPANLDPRIRTLARDVIQQSEARTWHDAARAVESHLRDQYGYS
                     LEMKASGADPLADFLFNVKQGHCEYFATAMAVMLRTQGVATRLVNGFLPGEYNEASGA
                     FTVRQSDAHSWVEVYFPETKSWVTFDPTPPAGRAATTRTGFAGMLSKYSEAFELMWFQ
                     YVVGYDKQEQRSLVTSARNKLFDVQRGSVNKFAQARAAFPGLIGPILLGATSLFGLMA
                     AVVLTRRVRRFGWRR"
     gene            complement(1998..2507)
                     /locus_tag="VIT19_11800"
     CDS             complement(1998..2507)
                     /locus_tag="VIT19_11800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839711.1"
                     /translation="MAGLHELLCNNCGLEFKGFDPLRKLERKPTSHRESNENNRRFAR
                     YKVHLPATISIVERNQLTWDVSYSTPARGHCETISQGGLALSFVGSRFSQERLTKPGC
                     FLYVTVSLPAGAVASVVSIVTCDRLGANGQAKWFVGAKVMQMSDADAARLAAFLEKRG
                     KTEPLVVST"
BASE COUNT          677 a          843 c          812 g          577 t
ORIGIN      
        1 cgcggcgcca accaaatcgg cgcacacggc gcgtcaacac aacggctgcc atcagtccaa
       61 acagcgatgt cgctcccaac agaattggcc caatgagccc ggggaatgcc gcgcgcgcct
      121 gcgcgaattt gttgactgag ccgcgctgca cgtcgaatag cttgttccgt gccgacgtca
      181 ccagggatct ttgttcctgc ttgtcatatc ccacgacgta ctgaaaccac atcaactcga
      241 acgcttccga atacttgctc agcatgcccg cgaagcctgt gcgcgtcgtt gccgcgcggc
      301 ccgcaggcgg tgtcggatcg aaggtgaccc aggatttcgt ctcgggaaaa taaacttcga
      361 cccacgaatg tgcgtcgctc tgacgcactg tgaaggcgcc ggaagcttcg ttgtattcac
      421 ccggcaggaa gccgttaacc aggcgcgtcg ccacgccctg cgtgcgcagc atcactgcca
      481 tggccgtcgc gaaatactca cagtggcctt gcttcacgtt gaaaagaaag tcggcaagcg
      541 gatcggctcc gctggctttc atctcgagcg agtacccata ttggtcccgc agatgagatt
      601 ccaccgcgcg cgccgcgtcg tgccaggttc gcgcttcgct ctgctgaatg acatcgcgcg
      661 cgagggtgcg gatccgcgga tcgagattcg ccggcaactc cagataccgg gccgactcag
      721 ccaggtattg aagccgatcg ttgcgcaagg cagcggcgct cggctcggtt gtatctgagt
      781 aaacccggta aacgacgcgc tcctgatcgt gggcacgcgt ctgaatcgct ccttcggaat
      841 cgacccggac gaatggcaag ttaccccgga ctgcgacgac gcgcggcgcg ccgaatagaa
      901 ttggggtatc aaccggctcc atgaaaaaag tttgcgtcgt caggtgagcc cgacttgcgg
      961 ccgtgccaag ttggaaaaag ccgctctcag tttccttctt ctcaaaccgt tccgcgacgg
     1021 gcgatttctt ccaggcttta ccggtgaaac tgtccaaagc gactccgcgc cagcgcaaac
     1081 gcgcgggcgg cacgctgcca aactcatcaa tgcgcacgcg catgaaaatt tcgtcgttgc
     1141 gcttcagttc gccgatttga ccgagcgtaa cgctgtctga gaaaccgacg aaacccgaca
     1201 cgccatcccc gccccgacgc agcgcgctgg acgcagtacg cggcgctatt aagaagaacg
     1261 gaagcgccag agtcacaatg aggagcaaca agcccactga gaccagcggc aggcgtcgcg
     1321 tctcgagata acggcggcgc cagagccgca tcggcagctt ttgaaaaagt gtcgaatcag
     1381 gcggaacgag caggcgcgtc tgggtggcgg taactttctt gcgcgccttc tgaatttcaa
     1441 acgcgacgat tgtcgagagc gcgcacagaa gataaagaat cagcaccccg agaaatatcg
     1501 ggctcgccgt caatcccgct gccaaaagca cggtgaaaaa tgaaatcagg tagagaaaga
     1561 accagtcgcg gtcgtgcttg cgttggaaga gtttgactgc cgagagaaaa aggatcaggt
     1621 gcgaaagaac agctacttcg accccgccac gcctgcccgt ctctaaatat tcaatctgca
     1681 gatagggcgt cagcacctgc caatcaaggt agaaaaacgg aatcgaagcc agaatgacgg
     1741 ccagcgccag tcgctcactc aactgccacc gtgtgtcttc caacttgaaa gcgacgatca
     1801 tcaccagcgt aaacgcgccc aacagccaca ggccgacccc gccggcgaca tagagcgcca
     1861 gcgccgcggc ggcaatcgtc gcgtaggaag tcagacggaa atagctggcg aattgcatgc
     1921 aagacgcttt gatgaaaaaa gcccgctcaa gtttaccctg agcggacttc ctttaataat
     1981 cgcggaattc gctgctgtca ggtcgagacc acgagcggct ctgtttttcc tcgcttttcc
     2041 aaaaatgcgg cgagccttgc tgcgtcggca tcgctcatct gcattacttt ggcgcccacg
     2101 aaccacttcg cctgaccgtt ggcgcccagt cgatcacacg taacgattga gacaaccgac
     2161 gcaacagccc ctgccggcag actgactgtg acgtacaaga agcaaccggg ttttgtgagt
     2221 cgctcttgag aaaatcggct gccgacaaac gataacgcca agcctccctg gctaattgtt
     2281 tcgcagtggc cgcgcgcagg ggtcgagtac gaaacatccc aggtcagctg gttgcgctcg
     2341 acgatgctaa tggttgccgg caaatgcact ttgtatcgcg caaatcggcg attgttttca
     2401 ttcgattcgc gatgcgaggt gggctttcgc tcaagcttac gcagcggatc gaagcctttg
     2461 aactcgagac cgcaattgtt gcagagcagc tcgtggagac cggccatctg cagaacaaaa
     2521 gatgaatcgt tatagccacg ctggacacgt gtgcttttgc atcgcggaca ccacatagag
     2581 aaccccgatc ttaggtaggt cttaggtctt aggtcttagg tcttaggtct taagtcttag
     2641 gtcttaggtc ttagaaaatt cttgagaaaa cgcgagtcta tttgcgattc acgatttacc
     2701 attcacggtt tttcggcggg acaaggtgag atggggcgaa gggagtctat caaaatggct
     2761 aagatggccg ccagacattt gtttgacgga cggctaaggc cttcaatctg aacgggaagc
     2821 actctttcgg tcacggggtc tgcgtgcccg gcgtttatcg ttccgtagga acgaaatgtc
     2881 tatagcaccg cgctacactc gacaatctg
//
LOCUS       DATDBY010000628         2170 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2795861, whole genome shotgun sequence.
ACCESSION   DATDBY010000628 DATDBY010000000
VERSION     DATDBY010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2795861"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..873
                     /locus_tag="VIT19_11805"
     CDS             <1..873
                     /locus_tag="VIT19_11805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009256459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF711 family protein"
                     /protein_id="HEY5839712.1"
                     /translation="RVGRLIKEAAERTSDQFGLACAKFVCFANAVEDNPFMAGAFHGV
                     GEPEAALNVGVSGPGVVNYAVSRAEPGLPLHELADVIKKLSFKLARAGELVGREAARR
                     LGIPFGIIDLSLAPTPVPGDSVANIIEAMGFERAGTHGTTAALALLTDAVKKGGAMAS
                     SSVGGMSGAFIPVSEDAGMIEAARVGALSLDKLEAWTSVCSVGIDMVAVPGSTTAETI
                     AAIIADEMAVGVMNNKTTAVRIIPVPGKDVGDMVEFGGLLGTAPIMAVNRFSSEQFIR
                     RGGRIPAPIQSLRN"
     gene            881..1459
                     /locus_tag="VIT19_11810"
     CDS             881..1459
                     /locus_tag="VIT19_11810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839713.1"
                     /translation="MPGRLMMKYSILCFAVAAFASPLAAQNKPAKPKADLTGSWLLDA
                     KKSNSVGLTRRPDLPIKISHQDPELRITLTSESNGQLVERELVYFTDGRGEENQATSM
                     LTTNPSDPPRVQKERTKSTTRWSGNKIITRAPLPLTISGQYVEFEQIDEWKLSGDGNV
                     LTQMSRVVLNRSSAPTFYPAMARDKKRVYNRV"
     gene            1476..1805
                     /locus_tag="VIT19_11815"
     CDS             1476..1805
                     /locus_tag="VIT19_11815"
                     /inference="COORDINATES: protein motif:HMM:NF013129.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMC domain-containing protein"
                     /protein_id="HEY5839714.1"
                     /translation="MERDALGLIECRGLVAMIEAADAAVKSANVTLVGWEKIDAGLVT
                     AIVRGEVGAVKAAVDAGAAAGRRVGEVLSTHVIPRPHSNIDEAIPVLHTGETTRKKIS
                     GSVPPRK"
     gene            1871..>2170
                     /locus_tag="VIT19_11820"
     CDS             1871..>2170
                     /locus_tag="VIT19_11820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839715.1"
                     /translation="MNTVADGSKAPSPLRFAGALQILALFAFLFPSSIQAQQPFTVDD
                     ADVTEHKKFQLQISHEFDILPRAAHPSLRQNTTVFVLNYGLIKDVEIGVDYPLIVI"
BASE COUNT          472 a          615 c          647 g          436 t
ORIGIN      
        1 cgtgtcggtc gattgatcaa ggaagccgcc gagcgcacca gcgatcagtt cggtctggcc
       61 tgtgcaaagt tcgtctgctt cgcgaatgcc gtcgaagaca atccgttcat ggcgggcgcg
      121 tttcacggcg tcggcgagcc ggaagcggcg ctgaatgtgg gcgtgtccgg tcccggagtc
      181 gtcaactacg cggtcagccg cgctgaaccg ggcctgcctt tacatgaact cgctgacgtc
      241 atcaagaagc tttcattcaa acttgcgcgc gccggcgaat tggtcggacg tgaagcagcg
      301 cgccggctgg gaattccctt cggcattatc gatttgtcgc tggcgccgac gccggtgccc
      361 ggcgattcgg tcgcgaacat catcgaagcg atgggattcg agcgcgccgg cacgcacggc
      421 accacggccg cgcttgcttt gttgaccgac gccgtaaaaa aagggggcgc gatggccagc
      481 agttcagtcg gcggtatgag cggcgccttc attccagtgt ctgaagacgc cgggatgatc
      541 gaagcggcgc gcgttggcgc tttgagtttg gacaaacttg aagcatggac cagcgtctgt
      601 tccgttggca tcgacatggt ggccgtgccc ggatcgacaa cagccgaaac gatcgccgcg
      661 atcatcgcgg acgaaatggc cgtcggggtg atgaacaaca agacgaccgc ggtgcgaatt
      721 atccccgtgc ccggcaaaga cgtcggcgac atggttgaat tcggcggcct gctcggcacc
      781 gcacccatca tggcggtcaa tcgcttctcg tccgagcaat tcattcggcg tggcggcaga
      841 attccggcgc cgatccagtc gttgcggaat tgagttaacg atgccgggcc gtctgatgat
      901 gaagtactcg atactctgtt tcgcagtggc cgcgttcgcg tctccactcg ccgcgcagaa
      961 taagccggca aagccgaagg cagacttgac cggttcgtgg ctgctcgacg ccaaaaagag
     1021 taacagcgtc ggcctgaccc gccggccaga cttaccgatt aagatttcgc atcaggatcc
     1081 cgaactgcgc atcacgctga catccgaatc aaacggccaa ctagttgaac gtgagttagt
     1141 ctatttcacc gatgggcgtg gcgaggaaaa tcaggcgacg tccatgctga cgacgaatcc
     1201 aagcgacccg ccgcgcgttc agaaagaacg aaccaagtcc acgactcgtt ggagcggcaa
     1261 caagatcatt acacgcgcgc cgcttccgct aacgatttcg gggcaatatg ttgagttcga
     1321 gcaaatcgac gagtggaaac tgtctggcga tgggaacgtg ctaacgcaaa tgagtcgggt
     1381 tgttctgaac cggagcagcg caccgacatt ttatccagct atggcgcgag acaagaagcg
     1441 ggtttacaat cgcgtctgat ttcacgagga caattatgga acgagatgcc ctgggattga
     1501 ttgaatgccg cggcctggtc gcgatgattg aagccgccga cgcggcggtc aagtccgcca
     1561 acgtaactct ggtcggttgg gaaaaaatcg atgcgggtct ggtgacggcg atcgtgcgcg
     1621 gtgaagtcgg cgcggtgaaa gctgcggtcg atgccggcgc ggcggccggc cgcagagtcg
     1681 gcgaagtgtt aagcacacac gtcattccgc ggccgcattc gaacattgat gaggctatcc
     1741 cggtgctcca caccggcgaa actacacgga agaaaatcag cggctcagtg ccaccgagaa
     1801 aatgaatttg gagtgcggcg gctgtgacgc cgctttagat cggtcttaat agccatcaac
     1861 ctcgactgaa ttgaacactg tcgcagacgg atccaaagcg ccgtcgccgc ttcgctttgc
     1921 cggcgcactc caaattctcg cgttgttcgc gttcttattt ccatcctcaa tccaagccca
     1981 acagcctttc actgtcgacg acgctgacgt cactgaacac aagaagtttc agcttcagat
     2041 cagccacgaa tttgacatcc tccctcgcgc ggcgcatccc agtcttcggc agaacactac
     2101 tgtcttcgtc ttgaattacg gtttgataaa agacgtcgaa attggcgtgg actatccgtt
     2161 gatcgtcatc
//
LOCUS       DATDBY010000629         4072 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1747150, whole genome shotgun sequence.
ACCESSION   DATDBY010000629 DATDBY010000000
VERSION     DATDBY010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4072
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1747150"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(298..756)
                     /locus_tag="VIT19_11825"
     CDS             complement(298..756)
                     /locus_tag="VIT19_11825"
                     /inference="COORDINATES: protein motif:HMM:NF015567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839716.1"
                     /translation="MKVIDGTARTPPQPLVGGVIVSHAHLGSEFLAAAEMILGKPLPH
                     ITSASIDWHDDVDVARHELERAIARVSQGKGVLLITDMFGGAPTDVASMFLDDPTVEV
                     ISGVNLPMVLKLAQQEPGGSLLTVSQAVRDSGKDGIQMAGELLPRNLTSE"
     gene            complement(768..1691)
                     /gene="rapZ"
                     /locus_tag="VIT19_11830"
     CDS             complement(768..1691)
                     /gene="rapZ"
                     /locus_tag="VIT19_11830"
                     /inference="COORDINATES: protein motif:HMM:NF015620.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEY5839717.1"
                     /translation="MATKRLAKTIDGTAPDVVIITGLSGSGMSSATNAFEDLGYFCVD
                     NMPLTLLPTFARLVQSRDDARGRIERAALVISFREGQFLADFATQLRSLRRRGLTVSV
                     LFFEASDEILARRFSETRRPHPAERGKGLHDAIRTERTAMKRVRALADEVIETSDYTV
                     HSLRNVLLERFRPSANAAPMRVQVLSFGHKYGVPREMELLFDVRHLPNPFFISTLKHL
                     TGDDPRVIKYLNAQPEVEDTVGRFMDLLTYLLPQYKREGKSYLTVGIGCTGGRHRSVM
                     IANELASRLRKFGFDAQAVHRDVRQSVPAKS"
     gene            complement(1883..2416)
                     /gene="raiA"
                     /locus_tag="VIT19_11835"
     CDS             complement(1883..2416)
                     /gene="raiA"
                     /locus_tag="VIT19_11835"
                     /inference="COORDINATES: protein motif:HMM:TIGR00741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:0022626 - cytosolic ribosome [Evidence
                     IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA];
                     GO_process: GO:0009386 - translational attenuation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HEY5839718.1"
                     /translation="MKFEYTGRHVEVTPAIRRHVEEQFKKLKNIFNGTEPRVHVILEI
                     EKNRQIGEVVVYWLDHTLAAKDTNADMYMALSRAIGKLEKQALKLKKRIIDRKQHARK
                     RSADAPSPDGQIEAAPVPARIIAARRYAVKPMTAEEAALDLSGRNDQFIVFRDADTDR
                     LGVLYKRQDGNFGLIEP"
     gene            complement(2497..>4072)
                     /gene="rpoN"
                     /locus_tag="VIT19_11840"
     CDS             complement(2497..>4072)
                     /gene="rpoN"
                     /locus_tag="VIT19_11840"
                     /inference="COORDINATES: protein motif:HMM:TIGR02395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEY5839719.1"
                     /translation="SQRLVLTPQLRQRIEMLQMTTIELTDLIQQQLNENPVLEEVATQ
                     EEARELAEKILDHMANGGEIENLPGPNVEASAPEMGAPSSNGDGEVVFSESGPDAQPA
                     GDFEMDAEAATVEGTEDSAVEGTRDPFEEVDFGREFQDYLDPGYKTQEFEYKEDAPTF
                     EQFLTKAPSLGDHLEWQLHMDCEDGEVCDAAESVIGNLDQDGRLNASNEEIAAQGGWS
                     EAIVERARQLVMRVDPVGCGARDVRECLLTQLEVRGETERLANRLIRDHLEALQQHKL
                     PHLAKQLGLDVEALVAELQFIRTLDPYPGRRYSSEEPVLISPEIYIEKLDEDGDYIIY
                     FADDGSPRLRISPSYQQMLSQGETTKETRDFIKEKMRSAVDLLRNIEHRRQTIYRVVE
                     SIVNRQREFLDNGVQYIKPMMLKDIAEDIGMHLSTVSRVVNRKYAHTPQGVIELRRFF
                     TEGMLNEEGEEVSTRIIKLKIKKLIEEEDSHNPITDDQVVKILVKDGIKLSRRTVAKY
                     RDQMNIPGSRERRAVV"
BASE COUNT          862 a         1176 c         1089 g          945 t
ORIGIN      
        1 ttcgggtcga agaattctga ttctcctggc ctgacggagg cgcgctcgtc atacgcgctc
       61 ggatttgcgt ttgagccgta gccgtcggaa cggccactaa aaggaaaaga aaaacgaggg
      121 atgtgttttt catcatgaca ctcaactcca catcaacttt gctgccggcg tcgggcaacg
      181 acgcctaatt gctcgcccgt cgggcaacgg gcttatcaat gtggataaac gacgaaaggc
      241 ggctggtttc aggaaaatgt cggaagtttc ccgcagaaca ggcgggcgcg ggaagaatta
      301 ctcggaagtc aggtttcgcg gcaggagttc gccggccatt tgaattccgt ctttaccgct
      361 gtcacggacg gcttgcgaga cggtcaggag ggacccgccg ggctcctgtt gcgccagttt
      421 cagcaccatg ggcaggttca cgccggaaat aacttccacg gtcgggtcat caagaaacat
      481 cgaagcgaca tcggtcggcg cgccaccgaa catgtcggtg attagcaaaa cgcctttgcc
      541 ctgcgagacg cgggcgatcg cgcgttccaa ctcgtgacgg gcgacatcca catcatcatg
      601 ccagtcgatc gaagctgaag tgatatgcgg cagcggtttg ccgagaatca tttctgccgc
      661 cgcgagaaac tcacttccca aatgtgcatg cgagacgatc acaccgccaa cgagcggttg
      721 aggtggagta cgtgctgtgc cgtcgataac tttcatctcg ctctactcta actctttgcg
      781 ggtacagact gacgcacgtc gcggtggacc gcctgcgcat cgaacccaaa cttacgcaga
      841 cgcgacgcca gttcattcgc gatcataacc gatcggtgac gcccgcccgt gcaaccaatg
      901 ccgacagtca gatacgactt cccttcccgt ttgtattgcg gcaacagata agtcagcaga
      961 tccatgaatc gtccgacagt gtcttcgacc tcaggctgtg cgttcaggta tttgataacc
     1021 cgcggatcgt cgccggtcag gtgcttcaag gtggagatga agaacggatt cggaagatgc
     1081 ctcacatcaa acagaagctc catctctcgc ggcacgccgt atttatggcc gaagctcaag
     1141 acttgcacgc gcatcggcgc cgcgttcgcc gaaggcctga atcgctcgag taacacgttc
     1201 cgcagtgaat gaaccgtgta gtcggacgtc tcgatcactt catccgcaag cgcgcgcacg
     1261 cgtttcatcg cggtgcgttc agtgcgaatc gcatcgtgca gtcccttgcc ccgctcagcc
     1321 gggtgcggcc ggcgcgtttc actgaagcgg cgcgccagga tttcatccga tgcttcaaag
     1381 aaaagaactg aaacggtcag accgcgccgg cgaagactgc gcagttgcgt cgcgaaatcc
     1441 gcgagaaact ggccttcacg aaagctgatt accagtgccg cgcgctcaat tcgtccgcgc
     1501 gcatcgtcgc gcgattgcac cagacgtgcg aacgtaggca gcagcgtcag cggcatattg
     1561 tcaacgcaaa aatatccgag gtcttcgaac gcgttcgttg ccgaactcat gcccgagccg
     1621 ctgagcccgg tgataatgac gacgtcaggc gcggtgccat caatcgtctt ggctaatcgc
     1681 tttgtggcca tagagtggca cagacttcag tctgtgattt caacgacatt gagcgtgatc
     1741 ctggtagaaa ccacagattg aagtctgtgc cactacatcg cgaacgtcct tcaatgtaat
     1801 ggggaactgt tcatcaagac aaacgaaaaa ggagcgcgac caaattgatc tgctcctttg
     1861 ccgtaatcaa atcgaacaac cgtcacggct cgatcagacc aaagtttcca tcctgacgtt
     1921 tgtaaagcac gccgagacgg tctgtatccg cgtcgcgaaa gacgatgaac tgatcattgc
     1981 ggcctgacaa gtccagggcg gcttcttcag ccgtcatcgg cttcaccgcg taacgtcgcg
     2041 cggcgatgat gcgagccggt accggcgcgg cttcgatctg tccatccgga ctcggcgcgt
     2101 ccgcagatct cttgcgcgcg tgctgcttgc gatcaatgat gcgtttcttg agtttgagag
     2161 cctgcttctc gagcttaccg atggcccggc tcaaagccat gtacatgtcg gcgttcgtgt
     2221 ctttggctgc gagagtgtga tcgagccagt aaacaacgac ctcgccgatc tgccgattct
     2281 tttcgatttc gagaattaca tgtacgcgtg gctcggtgcc attgaagatg ttcttaagtt
     2341 tcttgaattg ctcttcaacg tgacgacgaa ttgctggagt gacttccaca tggcgtccgg
     2401 tatattcaaa cttcatcgcg gttttttcgc ctctcctgtt ggcgcgcagc acgaattgtt
     2461 tctaacctgg cgaagccgaa gcgacgatca cgcacattaa acaactgcgc gacgctcgcg
     2521 cgaaccggga atgttcattt ggtcccggta tttcgccacc gtcctgcgcg aaagttttat
     2581 tccatctttc acaagtatct ttaccacttg atcgtcggta attgggttgt gagagtcttc
     2641 ttcttctatc aattttttga tctttagctt gataattcgc gtcgatactt cctcgccttc
     2701 ctcgtttagc atgccttcgg tgaagaagcg acgcagttcg atcacgcctt gcggagtgtg
     2761 tgcgtatttg cgattgacga cccgtgagac ggtcgacagg tgcatgccga tgtcttcggc
     2821 gatgtctttc aacatcatcg gcttaatgta ctggactccg ttatcgagaa actcgcgctg
     2881 ccgattcacg atcgattcca cgacgcgata tatcgtctgg cggcggtgct cgatgtttcg
     2941 caatagatcg accgccgagc gcatcttctc tttgatgaaa tcacgcgtct ccttggtcgt
     3001 ctcaccctgc gaaagcattt gttgataact gggactgatg cgcaggcgcg gactgccgtc
     3061 atcggcaaag tagatgatgt aatcaccgtc ctcgtccagc ttctcgatgt agatctcggg
     3121 cgaaatcaga accggctctt cggacgaata gcgacgaccc ggataaggat cgagcgtgcg
     3181 aatgaattgc agctcggcga caagcgcttc cacatcaaga ccaagctgtt ttgccaggtg
     3241 tggcagtttg tgctgctgca aagcttcgag gtgatcgcga atcaaccggt tggccagccg
     3301 ttcagtctcg ccgcgcactt ccagctgcgt cagcagacac tcgcgcacat cgcgcgcgcc
     3361 acaaccaacc ggatccaccc tcatcacgag ctgacgcgcg cgctcaacta tcgcttccga
     3421 ccaaccgcct tgtgccgcga tttcttcgtt gctcgcattt aggcggccat cttgatcgag
     3481 atttccgatg actgattccg ccgcgtcgca aacctcgccg tcctcgcaat ccatgtgaag
     3541 ctgccattca agatggtcgc ccaatgaagg cgccttcgta agaaactgct cgaaggttgg
     3601 cgcgtcttcc ttgtactcaa attcctgggt cttgtacccg gggtcgaggt agtcctgaaa
     3661 ctcgcggccg aaatccactt cttcaaaggg atcgcgcgtc ccttcaaccg cagagtcttc
     3721 cgtgccttcg accgtggccg cttccgcatc catttcaaag tcaccggcag gttgagcgtc
     3781 aggtcccgat tcggaaaaca cgacttcgcc gtcgccattc gaagacggcg ctcccatttc
     3841 cggagcagac gcctcgacgt tcggtccggg cagattctcg atctcgccac cattggccat
     3901 gtggtccagg atcttctcag ccagttcgcg cgcttcctcc tgcgtggcca cttcttcgag
     3961 caccggattt tcattcagct gttgctgaat caaatcggta agctcgattg tagtcatctg
     4021 cagcatctcg atccgttggc gcaactgcgg cgtcaatacg agtcgctgtg aa
//
LOCUS       DATDBY010000630         3683 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_681921, whole genome shotgun sequence.
ACCESSION   DATDBY010000630 DATDBY010000000
VERSION     DATDBY010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3683
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_681921"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(217..963)
                     /gene="pyrF"
                     /locus_tag="VIT19_11845"
     CDS             complement(217..963)
                     /gene="pyrF"
                     /locus_tag="VIT19_11845"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF001273.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEY5839720.1"
                     /translation="MAQIDVTDTGKDKLIVALDVETADRALALFEELRSVAGMFKIGS
                     QLFTAAGPDIVREIVAKGGKIFLDLKFHDIPNTVAAAGVEATRLGVSIFNVHASGGME
                     MMKRTAAAVSETALREGIERPKVIAVTLLTSIDDKALGEIGVDRAAKQLVTHLARAAA
                     DSALDGVVASPQEIELIRAAVPQKDFLIVTPGIRSANAAADDQRRTMTAAEAVRAGAD
                     YLVVGRPITSAADRVEAARRLVSDMAEALA"
     gene            complement(1225..2328)
                     /locus_tag="VIT19_11850"
     CDS             complement(1225..2328)
                     /locus_tag="VIT19_11850"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: protein motif:HMM:NF003645.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006222 - UMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEY5839721.1"
                     /translation="MSLYSSIVRPLLFRLPAETAHHFALSSLSGALRVDAARNAVEKR
                     YKRAPFGKLKRFGLTFSNPVGLAAGFDKNGEAADALSALGFGFIEVGTVTSEAQPGNP
                     KPRIFRLPKDRALINRLGFNNPGAKQVVKNLKEHRADCVLGINIGKSRSVPVEKAIPD
                     YLKTFGIVYEIADYVAVNVSSPNTPQLRELQQPDLLNDLLTSLQRRNRELAEKYSLTV
                     PRPLLLKIAPDLSEDELQAIIAVAQENKVSGIIATNTSVNREGLQTPQTRVAEIGEGG
                     LSGAPLSNRSNEVIRMIYRLTNGTMPVVGVGGVFTADDAWEKICAGASLIQIYTGFIY
                     EGPSIARRINEGLRQIVSKEGFVSLDEAVGCRA"
     gene            2376..2990
                     /gene="pyrR"
                     /locus_tag="VIT19_11855"
     CDS             2376..2990
                     /gene="pyrR"
                     /locus_tag="VIT19_11855"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF003549.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HEY5839722.1"
                     /translation="MSLVTHHFCCYYLTPVEFTEKARIMDDARINRALARLASEIVEE
                     NHGLRDLVLVGIRRRGVPLANRIADKIADLEGTRPPVGILDITLYRDDLSTVGAKPIV
                     SGTELPGDIENRTIVLVDDVLYTGRTVRAALDQLIDFGRPRRVQLAVLVDRGNEHREL
                     PIQADYIGKHVPTKKSEIIKVMLTDFDEDEGVLIVERPAAEAAA"
     gene            3141..>3683
                     /locus_tag="VIT19_11860"
     CDS             3141..>3683
                     /locus_tag="VIT19_11860"
                     /inference="COORDINATES: protein motif:HMM:NF014749.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839723.1"
                     /translation="MKHLLGIRELSAEQITHLLDTAESFRDISKREIKKVPALRGRTV
                     INLFFEASTRTRTSFEIAAKRLSADAINISVSTSSVSKGETLLDTARNLQAMSPDCIV
                     IRHASAGAPYHLTRVCDAAIVNAGDGSHEHPTQALLDALTIREHKNGIQGLKVAIIGD
                     ILHSRVARSNVYLLSKLGATV"
BASE COUNT          810 a         1037 c         1013 g          823 t
ORIGIN      
        1 cagggcgccc aggcacacca cgattcgtga gaaggtgatt tttcggtgca cgttcgcatg
       61 ataagagaca ggtgaggggt ggcgcaacgt cattcctaat caacgctttg cagcggactt
      121 tgttccggat gatgggccac agacgtacaa cgtcttaacg gataagaaaa ggcaatccaa
      181 tctgtgctaa tccggatgtg catctgtggc ttttgatcag gcaagcgctt cggccatgtc
      241 cgaaacgagg cggcgcgcag cttcaactcg atcagcggcc gaggtaatag gcctaccgac
      301 gacaagataa tcagctccgg cccgcacagc ttcagcggca gtcatcgtcc gacgctgatc
      361 gtccgcagca gcgttggcag accggatgcc aggcgtcacg attaagaagt ccttttgagg
      421 cacggccgcc cgaatgagtt cgatttcctg cggcgaggca accacgccat ccaaggcgct
      481 atcggcggca gcgcgggcca agtgggtcac aagctgtttg gcggccctgt cgacaccgat
      541 ctcgccgagc gctttgtcgt caatgctagt cagcagcgtc accgcgatga ccttcggcct
      601 ttcgatgcct tcgcgcaaag cagtttcaga caccgcagcg gcggtgcgct tcatcatttc
      661 cattccgccg ctagcgtgta cgttgaagat tgaaacgccc agacgagtcg cttcgacgcc
      721 ggcggcagcg actgtgttcg gaatgtcgtg aaatttcaaa tcgaggaaaa ttttgccgcc
      781 tttcgccact atctcgcgca cgatgtcggg tcccgcggcg gtgaacagct gcgaaccgat
      841 cttgaacatg ccggcgacgc tgcgcaattc ctcgaacagc gccagcgcac ggtcggctgt
      901 ctcgacatcg agggcgacga ttaatttgtc ttttcctgtg tcagtcacat caatctgggc
      961 catgatggcg cttttctcta gcccaggcgt aaacgccggg ggacacgaaa gtaccaattc
     1021 caatagcctc cttcaggagg ctttcgcgac aatgcctttc ggagtctgta agccccgtaa
     1081 acggggctaa tattctcgtt cgttcctttc cccaggcgta aacgcctggg ctagagaaag
     1141 ctatttgatc tttgcccaaa cttgatgttc cccgggcgta aacctgggct ggagaaacat
     1201 tttggattac cgatcctaac tgcgttacgc tcgacatcct accgcttcat ccagcgatac
     1261 gaatccttct tttgaaacga tctgacgcaa accttcattg atccggcgcg cgatactcgg
     1321 cccttcgtag atgaaaccgg tgtaaatttg aatcagactg gcgccggcgc aaatcttttc
     1381 ccacgcgtcg tccgcggtga acactccacc aactcccacg acgggcattg ttccattcgt
     1441 cagacgataa atcattcgga tgacctcgtt cgaccgattg ctgagtggcg cgccgctcaa
     1501 accgccctcg ccgatctcag cgacccgcgt ctgcggtgtc tgcaatcctt cacggttaac
     1561 actcgtgttc gtcgcgatga tacctgagac tttgttttcc tgcgcgaccg cgatgatggc
     1621 ttggagttcg tcttcactga ggtcgggcgc aattttgagc agcagcgggc gcggcactgt
     1681 cagcgaatac ttttccgcaa gttcacggtt gcgacgctgc aacgaagtca gcagatcgtt
     1741 gagcagatcc ggttgctgca attcgcgcaa ctgcggcgta ttgggcgagc tgacattcac
     1801 ggcgacgtaa tccgcaattt cgtaaacgat tccaaatgtc ttcagatagt cgggaatcgc
     1861 tttttcgaca gggacgctgc gcgacttgcc gatgttgatt ccaagtacgc aatcagctcg
     1921 gtgctctttc aggttcttca caacctgctt cgcgccggga ttgttgaaac cgagccgatt
     1981 aatcagcgcc cgatccttcg gcaagcgaaa aatgcgcggc ttcggattgc cgggttgcgc
     2041 ttcgctcgtc acagttccaa cttcaataaa tccaaatccg agtgcgctca acgcatcggc
     2101 agcttcaccg ttcttgtcga aacccgcggc gaggccgacc gggttcgaaa aagtcagtcc
     2161 gaaccgtttc agttttccaa atggcgctct tttgtatcgc ttttcgactg cattgcgagc
     2221 agcgtctacg cgcagcgctc cggacagcga tgacaaagcg aagtggtgcg ccgtctctgc
     2281 cggcaggcga aagagaaggg gacggacgat ggaactgtag agtgacaagt gacgagtgac
     2341 gagccggaag cgaagtttag cttgtcactt gtcacttgtc acttgtcact caccacttct
     2401 gttgctacta tctgacgccg gtggaattca ctgaaaaggc ccgcatcatg gacgacgcgc
     2461 gaatcaatcg cgcgcttgcc cgacttgctt ctgaaatcgt cgaagaaaat cacggtttaa
     2521 gggatttggt tttggtcgga atccgtcggc gcggtgtgcc tttggcgaac cggatcgccg
     2581 ataaaatcgc ggatctcgaa ggcacgcgac cgccggttgg catcctcgac atcactttgt
     2641 atcgcgacga tctttcaacg gtcggcgcaa aacccattgt cagcggaact gaattgccgg
     2701 gcgacatcga gaaccgcacg atcgttctgg ttgacgacgt gctctacacc gggcgcacag
     2761 tgcgcgcggc gctggatcag ctgatcgatt tcgggcgccc gcgacgggtg caactcgccg
     2821 tcctggtcga tcgtggtaac gaacatcgcg agctgcccat tcaggcggac tacatcggca
     2881 aacatgtgcc gacgaaaaag agcgagatta ttaaggtaat gctgacggac tttgacgagg
     2941 atgaaggagt cctgatcgtt gagcgccccg cagccgaagc ggcagcgtga agcggccttc
     3001 gaggccgctt ttttattgta cgaaagacgg tctttgatct ttgtgctttg tactttgact
     3061 tcttcactgc attgagtgcc aagatcaaag ttgattagcg aacaaagtac aaagcacgaa
     3121 gcacaaagta cggattagtt ttgaaacacc tactgggaat aagagaactt tccgcagagc
     3181 aaatcacgca tctgctcgat accgctgagt cgttccggga tatctcaaag cgtgaaataa
     3241 aaaaggtgcc ggcgctgcgt ggccgcaccg taatcaacct tttcttcgaa gcatccacgc
     3301 gcacgcgcac ttcgtttgag atcgcggcga aacgtttgtc cgccgacgcg atcaacatca
     3361 gcgtatcaac gtcgagcgtc tcaaaaggcg agacgctgct ggacacggct cgtaatctgc
     3421 aggcgatgtc tcccgactgc atcgtcataa ggcatgcttc agccggcgcg ccttatcacc
     3481 tgacgcgcgt gtgcgatgcc gccatcgtga atgcgggcga tggttcgcac gaacatccga
     3541 cacaggcgct gctcgacgcg ctcacgattc gcgaacacaa gaatgggatt caaggtttga
     3601 aggtcgcgat tatcggcgac atcctgcact cgcgcgtggc acgctcgaac gtctatctgc
     3661 tctcaaagtt aggggcgacg gtc
//
LOCUS       DATDBY010000631         2677 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2513120, whole genome shotgun sequence.
ACCESSION   DATDBY010000631 DATDBY010000000
VERSION     DATDBY010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2677
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2513120"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1354
                     /locus_tag="VIT19_11865"
     CDS             <1..1354
                     /locus_tag="VIT19_11865"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5839724.1"
                     /translation="TDPVTRVATPSRPRIPHGARYLSYGLFVQDVFTAIPERLRISGA
                     LRYSVASYKSRASNAPLGPTGLPLFPDDSARFGSFSGRIGAMVNVGRGFDVAFKYTRG
                     FRAPNTTDLGILGLVGNGFEVDAVTAQSLGGFVGTTAGADAVSSGIPVSLLGPEITDS
                     FDLTLRYSSKRFAAELVGFTNKLNDVYFDQALVLPPGAVGKFLGSEQIVAQNANGLVF
                     VAGATSPVLVRVNYDDARFNGVEFNSQARLNDQFSINGNFTYIRAHSLLDGRPPNVEG
                     GVPPATAFLSLRYQPRPRFYVEAYSTLAGRQRRLSSLDLADRRTGAARSRANIQNFFR
                     RGACVRGVTTPGATGCGSAGGILIPTGETLAQVQNRLLPIGATINGVTVVNNDTAVPM
                     FTAVRGYGLFGVRGALKFGDRSEVLFDFENIFDKSYRGISWGIDGGGRGVTVRYRYKF
                     "
     gene            1686..1979
                     /locus_tag="VIT19_11870"
     CDS             1686..1979
                     /locus_tag="VIT19_11870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839725.1"
                     /translation="MKKRSNATNSDEILPEYDLSGVKGVRGKYHQAYQQGHAVRVNRA
                     NGTVDVRYFTLEDGAVMLEPDVRKHFPDSRAVNRALRKLIPTSGPRRRANSSR"
     gene            complement(1986..>2677)
                     /locus_tag="VIT19_11875"
     CDS             complement(1986..>2677)
                     /locus_tag="VIT19_11875"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY5839726.1"
                     /translation="DMDQAVNGAMMGIFFNQGQVCCAGSRIFIEERAKDEFLARFKEK
                     AERVTVGDPMDKATGMGPQVSQDQLNRIKGYVDIAREEGATVFSGGGSPELAEEFKNG
                     YFFQPTIFSDVDNKMRVAQEEIFGPVSSVITFKDDDELIQKANDTIYGLSAGIWTQNI
                     TRAHSFAKAIKAGVVWINTYNMMNAASPFGGYKQSGYGREMGKGALDLYTQVKSVWVD
                     LSGKPIGWFGK"
BASE COUNT          545 a          769 c          757 g          606 t
ORIGIN      
        1 gactgatcct gtcacccggg tcgcgacgcc atcccgtccg cgcattccgc atggcgcgcg
       61 ttacctctcg tacggcttgt tcgttcagga cgtcttcacc gcgattccgg aacggctccg
      121 gatcagcggg gctcttcggt atagcgtcgc gtcgtacaaa tcgcgcgcgt ccaatgcgcc
      181 gctcgggcca accggtctac ccttgtttcc ggacgacagc gcgcgcttcg gttcattttc
      241 gggacgcatt ggcgcgatgg tgaatgtcgg ccgcggcttc gatgtggcgt tcaagtacac
      301 acgcggcttt cgtgcgccga acaccaccga cctcggaatt ctcggtctgg tcggaaatgg
      361 ttttgaggtt gatgcggtaa cggcacaaag cctcggtggt tttgtcggca ccacggccgg
      421 tgccgacgcc gttagctcag gcattcccgt gtcgctgctc ggacccgaga tcacggacag
      481 cttcgatctg actctgcgct atagcagcaa gcgttttgcg gctgagttgg ttgggttcac
      541 gaataaactg aacgatgtgt atttcgatca ggctttggtt ttgcctccgg gcgcagtcgg
      601 aaaatttctc ggcagcgaac agatcgtggc gcaaaacgcc aacggactcg tgttcgtcgc
      661 cggggccacc agcccggtgc tggttcgagt taactacgac gacgcgcggt tcaatggcgt
      721 cgagttcaac agccaggcgc ggctgaatga tcaattcagc atcaacggaa actttactta
      781 catccgcgcg cacagtttgc tcgacgggcg accgccaaat gttgagggcg gcgttccgcc
      841 ggcgacggct tttctcagtc tccgctatca accgcgtccg cgcttttacg tggaggccta
      901 ttcaacgctg gccggacgtc agcggcggtt gtcgtcactc gatctggcgg atcgacgaac
      961 gggagcggcg cggtctcgcg cgaacattca gaacttcttc cgccgtggcg cgtgcgtgcg
     1021 cggagtcacg acccctggcg caaccgggtg cggttcggcc ggaggtattc tgattccaac
     1081 gggcgagact ttggcgcagg tgcagaaccg cctgctgccg atcggagcga cgataaacgg
     1141 cgtgaccgtg gtgaacaacg acaccgcagt accaatgttc accgcagttc gaggttacgg
     1201 tctattcggc gtgagaggag cattgaagtt cggcgaccgc tcggaagtgc tcttcgactt
     1261 tgaaaacatt ttcgataagt cctaccgcgg gataagttgg ggaatagatg gcggcggtcg
     1321 tggcgtgacc gtgaggtatc ggtataagtt ttgatgagtt cagcaacttc ttctctactc
     1381 gctcccaatc tgctagtctc cgcgcgtgat gaggctgtta ttcgattggg atgaggaaaa
     1441 agctcgtcgc aatcgcaatt agcacaaggt aaccttcgac gaggcgcgaa cgatctttgg
     1501 cgatcctttt ctcgtcactc ttcctgacga gtttcattca cgacacgaac caaggcccat
     1561 cagcataggc acttcatcga ggaaccgagt tatacttgtc gtgcatacgg agcacgacga
     1621 agacgatgcg atcgtgattc ggttcatcaa cgcaagaaaa gcaacagcag cggaacgaca
     1681 agtttatgaa gaagcgaagt aacgcaacca actcagacga gatactgccg gagtacgatt
     1741 tatctggcgt gaagggcgtg cgcgggaaat accaccaagc ttatcagcaa ggccacgcag
     1801 tccgcgttaa tcgggcgaat ggaaccgtcg acgttcgata ttttacctta gaggacggcg
     1861 cagtgatgct tgagccggat gtcaggaaac atttccccga ttccagggcg gtgaatcgcg
     1921 cgctccggaa actgattccc actagcggcc cgcgccggag ggcaaacagc tctcgctgat
     1981 tcgcttcact tcccaaacca accgatcggc ttacctgaca gatcaaccca gacgctcttg
     2041 acctgcgtgt agagatccag cgcgcccttg cccatctcgc ggccgtaacc tgactgcttg
     2101 tagccgccaa acggtgacgc tgcattcatc atgttgtagg tattgatcca gacgacaccg
     2161 gctttaatcg ctttggcgaa gctatgcgcg cgcgtaatgt tctgcgtcca gattccggcc
     2221 gataagccgt agatcgtgtc gttcgctttc tgaatcagct cgtcgtcatc tttgaaagta
     2281 atgacgcttg agaccgggcc gaagatttct tcctgcgcaa cgcgcatctt gttatcgacg
     2341 tcgctgaaga ttgtcggttg aaagaaatag ccgttcttga actcttcggc cagttcgggc
     2401 gatccaccgc cgctaaacac tgtcgcgcct tcctcgcgcg cgatgtccac gtaacctttg
     2461 atccgattca actgatcttg cgaaacctgt ggccccatcc cagtcgcttt gtccatcgga
     2521 tcgccgaccg tgacgcgctc ggccttttcc ttaaatcgcg caaggaattc gtctttcgct
     2581 cgttcttcga tgaagatgcg cgagccggcg caacacacct ggccctgatt gaagaagatt
     2641 cccatcatcg cgccgttcac ggcttgatcc atatccg
//
LOCUS       DATDBY010000632         2146 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2728677, whole genome shotgun sequence.
ACCESSION   DATDBY010000632 DATDBY010000000
VERSION     DATDBY010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2728677"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VIT19_11880"
     CDS             <1..468
                     /locus_tag="VIT19_11880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839727.1"
                     /translation="LGHGGMLPRYPTDPGDTTVSPRRKGVKQGVILMLLGVLFVPIFG
                     VMAGFAGGPISDIFAFFAAITAIICFIGGPLRMLFAGIFEEPAKPKSYLPAVSYIPPA
                     MPPPPQARVSPLPPPSVSTQPWRARPDTAEIVPPTSVPDHTTKLLEKTESEKN"
     gene            465..1559
                     /locus_tag="VIT19_11885"
     CDS             465..1559
                     /locus_tag="VIT19_11885"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEY5839728.1"
                     /translation="MNLEERLRERIRREGPISFSEWMKAALYDERDGYYCRRDRVRQG
                     RHGDYRTAPEMSPLFGAAFANYFMKSYFDLGAPPSWTIVEIGGGNGDFAYGVLRSLQT
                     NFPNVFSATQYIIDEVSADAQSQALSKVAPFKDRVQFRALSELGEPLPHALIFSNELF
                     DAFPVHRVIGRGSGVKELRVALDNAGKFAWVDCELDGPVAEYCDQIKLELAEGQIYEV
                     NLRAERFLSLAAKSMREGLVITVDYGAERHELLSDPNRFSGTLRAFRKHQFVDEILSR
                     PGEYDLTTTVDWTEIIEAGQRHGLETLRFQRLNEFLEGEGVLGELMSAASLARDPVEQ
                     FKLNRYALELMKSDGMAAAFQVLVQRKTHP"
     gene            1676..2053
                     /locus_tag="VIT19_11890"
     CDS             1676..2053
                     /locus_tag="VIT19_11890"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HEY5839729.1"
                     /translation="MARRKAEHLTPLELEIMHVLWEHGASNVQTVQRNLKRELAYTTV
                     QTVLNILHRKSKVQRAMKDRAYFYKPVVSRSHATGEHLSDILDRLFGGSAESLVMSLL
                     ETKHLTPKKLARLQKLLEEEGQK"
BASE COUNT          473 a          592 c          612 g          469 t
ORIGIN      
        1 ctgggacacg gcggcatgct gccgcgctat ccaactgatc ccggggacac gacagtttcg
       61 ccgcgccgca aaggcgtcaa gcaaggcgta attctgatgt tgctgggcgt cctgttcgtt
      121 ccgatttttg gagtgatggc cggatttgcc gggggaccca tctccgatat cttcgcgttt
      181 tttgccgcaa ttactgcgat tatttgcttc atcggcggcc cgctgcggat gctcttcgca
      241 gggatttttg aagaacccgc gaagccaaaa tcctacctgc cggcagtgtc ttatataccg
      301 cccgcaatgc caccgccgcc gcaggcgcgt gtgtcgccat taccgccgcc ctccgtgagc
      361 acgcaaccat ggcgcgcgcg cccggatacg gctgagatcg tgccgcccac cagcgtcccc
      421 gatcacacca ccaagctcct cgaaaaaacc gagtctgaaa agaattgaac ctcgaagaac
      481 gtctgcgaga gcgcatccgg cgcgagggtc cgatcagttt ctccgaatgg atgaaggccg
      541 cgctgtacga tgagcgcgac ggttattact gccgccgcga ccgggtgcgc cagggcaggc
      601 acggggacta tcggaccgcg cctgagatga gtccgttgtt tggcgccgca ttcgcgaatt
      661 acttcatgaa atcttatttc gatctcggcg cgccgccgtc ctggacgatt gtcgagatcg
      721 gtggcgggaa cggggatttt gcatatggtg tgttacgcag tctacaaact aacttcccga
      781 atgtctttag tgccacccaa tacatcatcg atgaagttag cgcggacgcc cagtcgcaag
      841 cgctcagcaa agtagctcca ttcaaagacc gcgtgcagtt tcgcgcgctg agtgaactcg
      901 gcgagccctt gccacacgca ctaatttttt ccaatgagtt gttcgacgcc tttccggtgc
      961 atcgcgtcat cggccgcggt tctggtgtta aagagttacg cgtcgccttg gacaacgcgg
     1021 gcaagttcgc gtgggtggac tgcgaattgg atggccccgt agctgaatac tgcgatcaga
     1081 taaagcttga acttgctgaa ggacaaattt acgaagtgaa tctgcgggcg gagcggttcc
     1141 tgtcactagc cgcaaaatcg atgcgtgaag gtctggtgat cacggtcgat tatggcgcgg
     1201 aacgccacga gttactttct gatccgaatc ggtttagcgg cacgcttcgc gcattccgaa
     1261 aacaccaatt cgttgatgag attctctcgc gtccgggaga gtacgacctc acgactactg
     1321 tcgattggac cgagatcatc gaagccggac agcgccacgg cctcgagacg ctacgatttc
     1381 aacggctgaa cgaattcctg gagggcgaag gggtcttggg tgagttgatg agcgccgcaa
     1441 gtctagccag ggatccggtg gaacaattca agctcaaccg gtacgccctt gaactaatga
     1501 agtctgacgg catggcggcg gcctttcaag tacttgtgca gcgaaaaacc cacccgtgat
     1561 tagcagccga ctcgacgcga ttcgccctcg gttgacgcga ctcctaaaaa attagttgac
     1621 acgcctcagg gcgtgagcgt ataagctctc ctaaagtttt aggagggcga cctttttggc
     1681 acgacgaaaa gctgaacatc taactccgct cgagctggaa atcatgcacg tgctttggga
     1741 gcatggggcc tctaacgtcc agactgtgca gcggaatctg aagcgcgaac tggcgtacac
     1801 aactgttcag accgtcttga atattctgca tcgcaaaagc aaagtgcagc gtgcgatgaa
     1861 ggaccgcgct tacttttaca aacccgtggt cagccggagt cacgccaccg gagaacacct
     1921 gagcgacatt ctcgaccgtt tgtttggcgg atctgcggag agtctggtca tgagtctgct
     1981 tgaaacaaag cacctgaccc cgaagaaact ggcgcgcctg caaaagcttt tggaagaaga
     2041 gggacagaag tgagaaccgc ttcgcaattc ctgttaactt ttctgctgaa tgcttcgtgg
     2101 cagatcctgc tgattgcggc aatggcgtct gtgtgcgacc ggatct
//
LOCUS       DATDBY010000633         3906 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_490796, whole genome shotgun sequence.
ACCESSION   DATDBY010000633 DATDBY010000000
VERSION     DATDBY010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3906
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490796"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3882)
                     /locus_tag="VIT19_11895"
     CDS             complement(<1..3882)
                     /locus_tag="VIT19_11895"
                     /inference="COORDINATES: protein motif:HMM:NF015140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007154 - cell communication [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Calx-beta domain-containing protein"
                     /protein_id="HEY5839730.1"
                     /translation="MRDGRHQLIGANAGQITITGRVTIDSTYSAIEHPFGQGTSGSVV
                     FESGSTGMFSRGLDPFGGLNRAVVTFNAGSTAHFLSNGAFFGQTGATYGNLILDGSQG
                     YTFAGSTQTTILNNLQIEPGSTFLLSNSPGADLNLYGNLVDKTVVANGFSTNGRVVKF
                     LGATQTVSKAAGGIVRFDDVFINQSPGGKVQLLSPTDIDGQLNLSTADALLELNGQVI
                     ELLGTVTGPGNLRGDPNAIIAVNGVGDLGTVNFVSGGRTLSGLLLDREVDGAMTLGTD
                     LAVGGELRLDNGKLITANTLSLSPTSSVLRTNGYVIGNLQKSFGASGNLSSFTFPLGT
                     DNAYSPLDANVTANSDGTLTAKAVEGKQPNIPGANALQRYWTLNGSGITADLTFHYST
                     SPTNDVVGNEANYKIFKYDGSLTEFTPDATGSNSASDHYATLNNVSSFSEWTLAEPFV
                     VPSLSINPTATLAEADSGQQNMTFTVTLTPEHSQTVTVHYATADGSMNPALGGGCGGM
                     TDYVTTTGTLTFNPTETVQTIDVPICGDNRDEPDETLTVTLDTPTNATISQAIGTGTI
                     TDNDPMPVITINDDGVATPYPSNITVSGLTQNIASLTLTLTGLSHTFPGDVDMLLVAP
                     NGATYVFWSDISNFPVNADFTLDDNATNPLPESGPFTGGTFRPANYSPSDTFPGPAPL
                     PFPPYNQAAPTGAATFTSVFGGLTPAQANGTWSLYLVDDTAGDFGQITGGWSLNITEV
                     SAPCDPAPVVINTGDNGGVNPAQGAGTGTLRQALVDVCAGGTITFDTAGVFATPQTIT
                     LVTQLDVGISVTIDGPDPATQHVTIAGGGASRLFRIQSGQTVTIRELTLTGGSATGDF
                     GGAINNDHATLTLIGVTVSNNTADFGGGIFNNGSSGGGATLTIVNSTISGNTTHFGDG
                     GGIYNLGTGGNTTLSLTNSTLSGNKAKGNGGGMISNGPIGVTPVTIVNSTITDNRTDN
                     ENDGLFQGGGMAVVGGGPVILRNSIVALNFRGASPSTTADDISAALVPPSLSTHNLVG
                     NCFNPCFLTDGVNNNELNVSAASLNIGPLAADSAINQTHALLPGSIAIDAANDVTTLN
                     GGIDNVQTLIVLTNTTAFPAGVGFPIRIDDEQMIVTDKAGNALTVTRAANGTTAAAHS
                     DGAGVNPAFDERGRPRKIASIDIGAYESRPIITVGGPTTFCDGGNVTLTSNNASGNQW
                     YLNGNPIGGETSQSYIATASGNYTVVVTAGGATSDESAATVVTLNPLPPTPTITPGGP
                     TTFCQGGSVTLTSSSASGNQWHLNGNPIGGET"
BASE COUNT          800 a         1086 c         1128 g          892 t
ORIGIN      
        1 tgtctctccg ccgatcggat tgccgttcag gtgccactga ttgccgctcg cactgctcga
       61 tgtcagcgtg acgctgccgc cctggcagaa agtcgttggc ccccccggcg tgatcgtcgg
      121 cgtcggcgga agaggattta gcgttacgac tgttgctgct gattcatcac tggtcgcgcc
      181 accggccgta accacaaccg tgtaatttcc agatgcagtt gcgatgtaac tctgactcgt
      241 ctccccgccg atcggatttc cattcagata ccactgattg ccgctggcat tgttggaggt
      301 aagcgtgaca ttgccaccat cacagaaagt cgttggtccg cccactgtaa ttattggccg
      361 cgattcatag gcgccgatgt cgatacttgc gattttgcgc ggccggccgc gctcgtcaaa
      421 agcgggattt acacctgcgc catcactgtg cgccgcggcg gtggtgccgt tagccgcacg
      481 ggtcacagtc aaagcatttc cagccttgtc ggtgacgatc atctgttcgt catcaatgcg
      541 aatgggaaag ccgactccgg cagggaaagc agtcgtattg gtcaggacga tcaaagtctg
      601 gacgttatcg attccgccat tgagcgtcgt gacatcgtta gccgcgtcga tcgcaatact
      661 gcccggcagt aaggcgtgcg tctggtttat cgcgctgtct gcagccagcg ggccaatatt
      721 caaactcgcg gctgagacgt tcaactcatt gttgttcacg ccgtctgtca ggaaacacgg
      781 attaaagcaa ttacccacta gattgtgggt gctgaggctg ggcggaacca gtgcggccga
      841 tatatcgtca gcggtcgtgc tgggactggc gccgcgaaaa tttagagcga caatcgaatt
      901 gcgcagtatg accggaccac cgccaacgac tgccatgcca ccgccttgga ataagccgtc
      961 attttcgtta tcggtgcggt tgtccgtaat tgtggagttg acaatcgtta cgggcgtgac
     1021 gccaatggga ccattgctga tcatgcctcc gccatttcct ttggctttat taccgctaag
     1081 agtgctgtta gtaagactca atgtcgtgtt gccgccggtg cccaggttat agattccgcc
     1141 gccatcacca aagtgcgtag tgttaccgct gatggtgctg ttaactatcg tcaaggtcgc
     1201 accgccgccg gaacttccgt tattgaagat gcccccgcca aagtccgccg tgttgttgct
     1261 taccgtcact ccaatgagcg tcagcgttgc gtgatcgttg ttgatcgcgc cgccaaagtc
     1321 gcccgtcgcc gagccaccag taagtgttag ttcgcgaatc gtcaccgtct ggcccgattg
     1381 aattctgaac aggcggctcg ccccgccacc ggcaatcgtc acgtgctgag tagccggatc
     1441 gggaccgtcg atcgtcacac tgatgccaac gtccaattgc gtaacgaggg taatcgtctg
     1501 cggcgtagcg aagacgccgg cagtatcaaa cgtgatcgta ccgccggcac acacatcaac
     1561 cagcgcctga cgcaaggttc ctgtacccgc gccttgcgcg ggattcacac caccattgtc
     1621 tccggtattg atgacaaccg gagccgggtc gcatggcgct gatacttccg tgatgttcag
     1681 agaccaacca ccggtgattt ggccgaagtc gccagctgta tcgtcaacga gatatagact
     1741 ccaggtaccg tttgcctggg cgggggtcaa tcctccaaac accgatgtaa aagttgcagc
     1801 tccggttggt gcggcctggt tgtatggcgg aaacggaagg ggggccggac cgggaaaagt
     1861 atctgagggg gaatagttag cgggccggaa ggtgccgccc gtaaacggac cactttcagg
     1921 aagcgggttc gtcgcgttat cgtcgagtgt aaagtcggca tttacaggaa agttgctgat
     1981 atccgaccag aagacatagg tggctccgtt gggggctacc agcagcatat ccacatcacc
     2041 cgggaaagtg tgactgaggc ccgtcagagt caatgtcagc gaagctatgt tttgagtcag
     2101 gccagagact gtaatgtttg aaggataagg cgtcgcgacg ccatcatcgt taattgtgat
     2161 caccggcatc ggatcgttgt cggtgatcgt gccggtgccg atggcctgcg aaatcgtcgc
     2221 gttcgtcggc gtatcgagcg taacggtcag cgtctcatcc ggttcgtctc tgttatcgcc
     2281 acagatcggg acgtcgatgg tctgtacggt ctcggtcgga ttgaaagtca atgtgccggt
     2341 ggttgtcaca taatcggtca tgccgccgca ccctccgccg agcgccggat tcatcgatcc
     2401 gtcagccgtc gcgtagtgga cggtaaccgt ctggctgtgc tccggcgtca aggtcaccgt
     2461 gaaggtcatg ttttgctggc cgctatccgc ctcagcaagt gttgccgtcg ggttaatcga
     2521 aagtgaaggc accacgaaag gttccgccaa agtccattcg ctgaatgatg agacgttgtt
     2581 gagagtcgcg tagtgatcgc tcgcgctgtt cgacccggtc gcatccggcg tgaactcggt
     2641 caacgagccg tcgtacttga atatcttgta atttgcttcg ttgccgacga cgtcgttcgt
     2701 cggtgaagta ctgtaatgga aagtcaggtc ggcggtgatg ccggagccgt tcagggtcca
     2761 gtagcgttgc agcgcattcg ctcctggtat gttcggctgc ttgccttcaa ccgccttagc
     2821 agtgagcgtg ccatcgctgt tcgccgtcac gttggcgtcg agcggcgagt aagcattgtc
     2881 agtgcccagc gggaaagtaa agctgctcag gttcccgctc gctccaaaac tcttttgcag
     2941 attcccaatg acgtagccgt tagttcgtaa cactgacgag gtcggactca gcgagagggt
     3001 gttcgcagtg atcagtttgc cgttatccag ccgcagttcc ccgccgacgg cgaggtcggt
     3061 tcccagcgtc attgctccat cgacctcgcg atcaagcaga aggcccgaca gggtacgtcc
     3121 gccggacacg aaattgactg ttcccagatc gccgacgcca ttgacggcga tgattgcgtt
     3181 cggatcgcct ctcagattgc cggggccggt aacagtgccg aggagttcaa tcacctggcc
     3241 gttcagctcg agcaaggcgt cggcagtgct gaggttcaac tggccgtcga tatcggtcgg
     3301 actcaacaat tggactttgc cgccggggct ctgattgata aaaacgtcgt cgaaacgaac
     3361 aataccccct gcggctttgg agaccgtttg cgtcgcgccc aggaacttca cgacgcgtcc
     3421 attcgtgctg aaaccattgg caaccacggt cttatcgact aagttgccgt acagattcag
     3481 atcggcaccg ggcgaattgg acagaaggaa ggtgcttcca ggctcaattt gcaaattgtt
     3541 gaggatggtc gtttgggtcg agccggcaaa ggtatagcct tggctgccat ccaaaatcag
     3601 atttccgtag gtcgcccccg tttggccgaa aaatgccccg tttgaaagaa aatgagcggt
     3661 gctgcctgca ttgaaagtga cgaccgctct attcaagccg ccgaacggat cgagaccgcg
     3721 gctgaacatc ccggtcgatc ctgattcaaa tacaactgat ccactcgtac cctgaccaaa
     3781 tggatgctcg atggcagaat aggtgctgtc tatcgtcacc cgaccagtga tggtgatctg
     3841 accggcgttg gcgccaatca actgatgtct gccatccctc atcaagatct gtcccgccac
     3901 ctcgga
//
LOCUS       DATDBY010000634         2302 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2526110, whole genome shotgun sequence.
ACCESSION   DATDBY010000634 DATDBY010000000
VERSION     DATDBY010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2526110"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1074
                     /locus_tag="VIT19_11900"
     CDS             <1..1074
                     /locus_tag="VIT19_11900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839731.1"
                     /translation="QSQDRVAISVTNRKPILLALGASFLLTVLIIVGSRNLEHYDAAL
                     FGYTIASVVAFGAVVFRYAIWLQRPATRVYWRRGWKLYLQRDKFVQNTANAAQTLATN
                     LVGQRFIFKRGFSRWLMHFLIMWGCVISALITFPLVFGWVHFKLEGDLGYRAYVFGFP
                     LNLMQGRSIIAWITFHALDITAVMVIAGCAVAIHRRLRDRGAISLQQFTLDFVPHMLL
                     LAISVTGLMLTASSLWLNGYMYHFIALTHQATVIMTLFYLPFGKLFHVVQRPASIGVE
                     LYQQRAREMEQAKCARCGAEFVSQLWLDDLKTVVDKLGFDYSMGDGRTLQDYCPRCKR
                     IMRGLAYANLPKGEEQVFKGSRV"
     gene            1317..>2302
                     /locus_tag="VIT19_11905"
     CDS             1317..>2302
                     /locus_tag="VIT19_11905"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY5839732.1"
                     /translation="MSRVEHLEQIIEAFGPHLHDAPYGGWRADRVIDKIVPTHCPYCA
                     VQCGMNLLVEDNHVVGVEPRYDFPVNEGRLCPKGVTAYLQVHHPDRLLHPLIKRNGKF
                     ERATWDEALNLVVSKFKELQERHGKDSIGVYSGSSLTTEKTYLMGKFARAGLGTRYID
                     YNGRLCMVSAAAGNNKAFGIDRAANPWDDIPLAEVLLIAGSNCAETFPVLNKFLWQQR
                     DNGGRWIIVDPRETATARQGDLHLQLKPGTDVALANGMLHVLIEENLIDQAFIDARTN
                     DWVATSELAMRYPPDVAAQISGVPAEKIIQAARMYGRAKTAMVMHARGIEHHT"
BASE COUNT          493 a          611 c          666 g          532 t
ORIGIN      
        1 cagagtcagg acagagtggc tatttccgta actaatcgca aaccgatact gcttgcgctg
       61 ggagcttcgt tcctgctgac ggtgctgatc atcgtcggct cgcgcaacct cgaacattac
      121 gacgccgcgc ttttcggcta caccatcgcg agtgtcgtcg catttggcgc cgtagtattt
      181 cgttatgcga tctggttgca gcggcccgca acccgagtct attggcgacg cggatggaag
      241 ctctatctgc aacgcgacaa gttcgtgcag aacactgcca atgcggcaca gacacttgca
      301 actaacctgg tcggacagcg tttcatcttc aagcgcggat tttcccgctg gctgatgcac
      361 tttctgatca tgtggggatg tgtgatttca gccttgatca cgtttccact ggtcttcgga
      421 tgggtgcatt tcaaattgga aggtgactta ggttaccggg cttacgtttt cggattcccg
      481 ttaaacctga tgcaagggcg cagcatcatt gcgtggatta catttcacgc gcttgatatc
      541 accgccgtaa tggtaatcgc cggatgcgcg gtcgcgattc atcgccgctt gcgcgatcga
      601 ggggccattt ccttgcagca gttcacgctg gatttcgtcc cgcacatgtt gctgctggcc
      661 atttcggtta cgggattgat gctcacggcc tccagtcttt ggctaaacgg ttacatgtat
      721 cacttcatcg cgctgacaca tcaggcgacg gtgatcatga cgctctttta tctgccgttc
      781 ggcaagctct ttcatgttgt gcagcggccg gcgtcgatcg gcgtcgagtt gtaccaacag
      841 cgcgctcgcg agatggagca ggcgaagtgt gcgcgctgcg gcgcggagtt tgtgtcgcaa
      901 ctttggcttg atgatttgaa gacggtggtt gataagcttg gcttcgacta ttcgatgggc
      961 gatggccgga cgctgcaaga ctattgtccg cgctgcaaac gaatcatgcg cggactggca
     1021 tatgcaaatt tgccaaaagg cgaagagcag gtttttaagg gatcgcgggt ttagatgatt
     1081 caaagagcct gcggagcagg cgaaagcata aagcctgggg tggagcgaag cgaaacccca
     1141 ggtaactgtg gttagcgaat cgcagcccgc gaagcgggcg acagatgtga cggatacaat
     1201 gatagcgaag ggctgccgtc cgctctgcgg actcatgatc gtttggttga ccctttcctg
     1261 aggcttacgc cccaggcttt acgctttcgc ctgctccgca ggctgaatct tcactcatga
     1321 gtagagtcga acatctcgag caaattatcg aagcctttgg gccgcatctt catgatgcgc
     1381 cgtacggcgg ctggcgggcg gatcgggtga tcgacaagat tgtgccgact cattgtccgt
     1441 actgcgcggt gcaatgcggg atgaacctcc tggtcgaaga caatcatgtt gtcggcgttg
     1501 agccgcgtta tgactttccc gtaaacgaag gccgtctttg cccgaaaggc gtcactgcat
     1561 acctgcaagt tcaccatccg gatcgcctgc tgcatccgtt gataaaaaga aacggcaaat
     1621 tcgagcgcgc cacctgggac gaggcgctca acctggttgt tagcaagttc aaggaactgc
     1681 aagaaagaca cggcaaggat tcaattggcg tctattccgg ttcgtctttg acgactgaaa
     1741 agacttacct aatgggtaag ttcgcgcgcg ccggacttgg cactcgctac atcgattata
     1801 acgggcgact ctgcatggtc tccgcggcgg cgggaaacaa caaggctttt ggaatcgatc
     1861 gcgccgcaaa tccctgggac gacattccgc tcgccgaagt tctgctgatt gccggctcga
     1921 attgcgctga aacctttccg gtcctgaaca aattcctttg gcagcagcgc gacaacggcg
     1981 gacgctggat catcgttgac ccgagggaaa cagcgacagc aagacagggt gatctccatt
     2041 tacaactgaa gcccgggact gatgtagctc tcgcgaacgg catgctgcac gttctgatcg
     2101 aagagaacct gattgaccag gccttcatcg atgcccggac gaatgattgg gtagcaacca
     2161 gcgagttggc gatgcgctac ccgcctgatg ttgctgcgca aatcagcggc gttcccgcgg
     2221 aaaaaattat ccaggcggcg cgcatgtacg ggcgcgcgaa aaccgcgatg gtcatgcatg
     2281 cgcgcggcat cgaacatcac ac
//
LOCUS       DATDBY010000635         3537 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2410868, whole genome shotgun sequence.
ACCESSION   DATDBY010000635 DATDBY010000000
VERSION     DATDBY010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3537
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2410868"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..634)
                     /locus_tag="VIT19_11910"
     CDS             complement(<1..634)
                     /locus_tag="VIT19_11910"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEY5839733.1"
                     /translation="MTNHRKSKQLWRMASIITVVTSCVMFATFVAGQEGTRLTPAQRE
                     IERQRQRLGSPEVEERRDALMRLENLKRPEASRAAAAALNDASPTVRAAAAHAVISLP
                     NHEAAALLLPLLKDKTEFVRREVAFALGATRHPSALSALIDVLKRDKQPSVRAAAAIA
                     LGEIGDAAAVPALSQIITGDGSKKQKSRIDEEEFVVRSAVRSLGQIGSRAA"
     gene            complement(638..1471)
                     /locus_tag="VIT19_11915"
     CDS             complement(638..1471)
                     /locus_tag="VIT19_11915"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEY5839734.1"
                     /translation="MINYYEVLGVKRSAPASEIKSAYRKLARKKHPDVNRGSEKAERE
                     FALLSLAYHTLIDPQERAFHDQQLDKGTQAASILHSENPHAQRAREMQARWDRVVNQI
                     LENDRRESIARQRAVFTTVSLFLSTFFVAMIKPPLWQSFGVVGRAILVTLFMTGVWHL
                     VRRLREYFRHYTYRPHEIHYSITEEEKREAKPFSRFSATAFLLGGYVVSLGIGLLIGW
                     HSQDFFSDLALLFRHVPSAVGASSSTTLLLIYDLLFYPPIAVLIIDTMHAVASRIDAG
                     N"
     gene            complement(1577..3082)
                     /locus_tag="VIT19_11920"
     CDS             complement(1577..3082)
                     /locus_tag="VIT19_11920"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF002073.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEY5839735.1"
                     /translation="MDVRGISQPINKIDADAIAVAVFKGEKPDDGVLKTLDKAVDRAI
                     TSIIKSEEFSAKEGETAYFHLTDSGLQAKRLLLIGCGERGEYGPRQISQMGGTAARFL
                     RSKAAKTIAIVPRADGDVERVAQTVIGGAVMGLFEPDKYRTREKEDRQIERFDVVIEG
                     ADKKALERGAERGRIIGESANVTRDMANEPGGYLTPTEMANRAKQIAKQFGLDIDVLE
                     QKQLEKLGMGSFLGVSRGSDEPPKLIVMKYTPPKKTKSDGLLALVGKGITFDSGGISL
                     KPGENMELMKYDMSGAATVIGTMRAIAQLKPSIPVLAVAPCCENLPSGKATKPGDILR
                     AMTGKTIEVINTDAEGRLILADAIAYAKKLGATQIIDMATLTGAVSIALGDVNTAILG
                     TDQALIDSFIAAGKEVGERFWQLPLDKDYSNQIKSDIADIKNVGGKKAGTITATAFLK
                     EFADGVSWAHLDIAGTAWGDPATPFRSKGPTGVAVRTLVEFIERSAGQNAS"
     gene            complement(3164..>3537)
                     /gene="smpB"
                     /locus_tag="VIT19_11925"
     CDS             complement(3164..>3537)
                     /gene="smpB"
                     /locus_tag="VIT19_11925"
                     /inference="COORDINATES: protein motif:HMM:TIGR00086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEY5839736.1"
                     /translation="VGTEVKSVLDGRIQLKDSYVGIREGEAWLFNAHISPYSHGNTAN
                     HDPLRTRKLLLHRREIDKLDQVAAVQGMTLVVTRVYLKGRRIKFEIGVAKGKKLYDKR
                     ETELRRIVERETRAQLKERNR"
BASE COUNT          711 a         1036 c          972 g          818 t
ORIGIN      
        1 ctgcggcgcg acttccaatc tgtccgagtg atcgcaccgc tgatctgacc acgaattctt
       61 cttcgtcaat tctggacttc tgcttttttg aaccgtcgcc ggtgatgatc tgcgagagcg
      121 cgggcacggc cgcggcgtca ccgatctcac ccaaagcgat cgcggccgcc gcgcgaaccg
      181 agggttgttt gtcacgcttc aacacatcga ttagagcgga gagtgcggaa ggatgacgag
      241 ttgcgcccag ggcgaatgcg acctcgcggc gcacgaattc cgttttgtct ttgagcagcg
      301 gaagtaacag cgccgcggct tcatgattgg gcagagagat gactgcgtgg gcagccgcgg
      361 cccgcacggt cggactggcg tcattcaacg ctgccgcggc cgcgcgtgac gcttcgggcc
      421 gcttcagatt ctccagacgc atcaacgcat cgcgccgttc ctcaacctcc ggcgatccca
      481 gccgctggcg ttgccgctca atttctcgct gagccggtgt caggcgcgtg ccctcctgcc
      541 cggcgacgaa tgtcgcgaac atgacgcagg atgtgacgac ggtgataatg ctcgccattc
      601 gccacaactg ttttgatttc cggtgatttg tcatcagcta attcccagca tcgattcgtg
      661 acgcgaccgc gtgcatggtg tcaataataa gaacagcgat cggtggatag aacaataggt
      721 cgtaaatgag caggagagtt gtcgaagatg aggcgcccac ggcacttgga acatgtcgaa
      781 acaaaagggc caaatctgaa aagaaatcct gtgaatgcca accgattaac aaaccaatgc
      841 ccaggctcac gacatagccg cccaacaaaa acgcagtagc tgaaaatctc gagaatggct
      901 ttgcctcacg cttctcttct tcggttattg aataatgaat ctcatgtggc cgatatgtgt
      961 agtggcgaaa gtattcgcgc aggcggcgaa ccaggtgcca caccccggtc ataaagagcg
     1021 tcacgagaat ggcgcgcccg actacgccga acgactgcca tagcggcggc ttgatcatgg
     1081 cgacgaaaaa cgtcgaaagg aaaagcgaca ccgtcgtaaa gacggccctt tggcgagcga
     1141 tactctcgcg ccgatcgttc tcgaggattt gatttacgac gcggtcccaa cgcgcctgca
     1201 tctcgcgggc acgttgcgcg tgcggattct ccgaatgcag gattgaagcg gcttgcgtgc
     1261 ccttgtcgag ttgctgatcg tgaaacgcgc gctcctgcgg atcgattagt gtgtggtagg
     1321 ccagcgacag cagggcgaac tcgcgttcag ctttttccga tccacgattt acatcgggat
     1381 gcttcttgcg cgccagcttt cgataggcgg acttgatctc gctggcgggc gctgaacgct
     1441 taactccgag gacctcgtaa taattgatca tcgtagggga ataagggact cgcgctcgct
     1501 tttggccgcg tgattgcggc gcgaaccctc agtttcaggg aaattttagc accgttcggc
     1561 gcgaggcggc gaacctttaa gatgcgttct ggccggccga gcgttcgatg aattcgacca
     1621 aagttcgcac cgcaactccg gttgggccct tagaccgaaa aggtgtggcc gggtcgcccc
     1681 aggcggtgcc cgcgatatca agatgcgccc acgaaacgcc gtcggcgaac tctttcaaaa
     1741 aagccgtcgc ggtgatcgtg ccggcttttt tgccgcccac attcttgatg tccgcaatgt
     1801 cggatttgat ttggttcgaa tagtctttgt cgagcggcaa ctgccagaag cgttcgccga
     1861 cttctttgcc tgcggcgatg aacgaatcaa ttaaggcctg atcggttccg aggatcgccg
     1921 tgttcacgtc gccgagcgct atcgaaaccg cgcccgtcaa agtcgccatg tcgatgatct
     1981 gagtggcgcc gagcttcttc gcataagcga tcgcgtccgc gagaatcaaa cgcccctcgg
     2041 cgtcggtgtt gatgacttcg attgttttcc ccgtcatcgc gcgcaggatg tcgcccggct
     2101 tggttgcttt gcctgatgga agattttcgc aacagggcgc aacggcaagg actggaatgg
     2161 acggtttcag ttgcgcaatc gcgcgcatag tgccgatgac tgtcgccgca ccgctcatgt
     2221 catatttcat caactccatg ttctcgccgg gcttcagaga gatgccgccc gaatcgaacg
     2281 tgattccctt cccaacaagt gccaacaagc cgtccgactt tgtctttttc ggcggagtgt
     2341 acttcatgac gatcagcttc ggcggctcat ccgacccgcg tgagacgccg aggaacgaac
     2401 ccatgccgag cttttcgagt tgcttctgct ccaatacatc gatgtccaac ccgaactgct
     2461 tcgcgatttg ctttgcgcga ttagccattt cggtcggcgt cagatagccg ccgggctcgt
     2521 tcgccatgtc acgtgtgacg ttggccgatt cgccgatgat tcgcccgcgt tccgcgccgc
     2581 gttccagtgc tttcttgtcc gcgccttcga tgacgacgtc gaatcgttcg atctgacggt
     2641 cttctttttc tctggtgcgg tacttgtccg gctcaaacag tcccatgacg gcgccgccaa
     2701 tgaccgtttg cgcgacgcgc tcaacatcac cgtcagcgcg gggaacgatg gcaatcgtct
     2761 tcgcggcttt gctgcgcagg aaacgcgccg ccgtgccgcc catctgcgag atctggcgcg
     2821 gcccgtattc accgcgctca ccgcacccga tcagaagcaa ccttttcgcc tgcagtccac
     2881 tatcggtgag atgaaagtaa gcggtctcac cttccttggc tgagaactct tctgacttga
     2941 tgattgaagt aatcgcgcga tcgacagcct tgtccagagt tttcaacacg ccgtcgtctg
     3001 gcttctcgcc tttgaaaacc gcgaccgcga tagcatccgc atcgatcttg ttgattggtt
     3061 gtgaaattcc cctgacgtcc atttattttt tacacctcgg gttgagtggc acagacttca
     3121 gtctgtggat tcgcactgga acacagactg aagtctatgc tacttatcga tttctttctt
     3181 tcagctgcgc gcgtgtctcc cgttcgacga tacgccgcag ctcagtctcc cgcttgtcgt
     3241 aaagcttctt gcctttagca actccgattt cgaacttgat ccggcgtccc ttcagataaa
     3301 cccgcgtgac caccagcgtc attccctgga cagcggcaac ctggtcaagc ttgtcgatct
     3361 cacgccgatg cagaagcagt tttcgcgtgc gcaagggatc gtgattcgca gtattaccgt
     3421 gcgaatacgg cgagatatgc gcattgaaga gccacgcttc gccttcacga atcccgacgt
     3481 aggaatcttt caattggatt cggccatcga gcacgctttt cacttccgtc ccaacca
//
LOCUS       DATDBY010000636         3156 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1718131, whole genome shotgun sequence.
ACCESSION   DATDBY010000636 DATDBY010000000
VERSION     DATDBY010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3156
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1718131"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..633)
                     /locus_tag="VIT19_11930"
     CDS             complement(<1..633)
                     /locus_tag="VIT19_11930"
                     /inference="COORDINATES: protein motif:HMM:NF013781.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HEY5839737.1"
                     /translation="MVAKQKTERREHFETSSGIELPVDFNPSNTEPVQYDRDLADPGE
                     FPYTRGIRPNMYRGRLWTMRQYAGYANAEESNARYKYLLSQGTTGLSVAFDLPTQIGL
                     DSDDPLAAGEVGKVGVAIDSLEDMLRLFDGIRLDNVSTSMTINATAAILLSLYLAVAR
                     KQGVAFDKVEGTIQNDILKEYIARGTYIFPPEPSLRLITDTFAFCAREVPN"
     gene            967..1863
                     /locus_tag="VIT19_11935"
     CDS             967..1863
                     /locus_tag="VIT19_11935"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEY5839738.1"
                     /translation="MRALRDIRVGPAGWSYADWRGRVYPEGAGTRFDTLSLVAKYFDT
                     AEINSSFYHPPSPETARSWLRRIEHNPNFVFTAKLFRAFTHDRGKATAEDERLCREGL
                     DPLMEAEKLGAVLVQFPWSFKNELDERNYLTQLVTKFKDYPLVVELRHESWNNARVLQ
                     TLEDLGVGLCDIDQPLFHNSIKPSAEVTSDIGYVRLHGRNYQNWFREEANVLERYDYL
                     YGPEELEPWVDRIKEVAAKAKETFVITNNHARGQSLVNAFEILAELEEEKVPGPAKLI
                     ETYPRLAESVEPDDEKQQPSLF"
     gene            complement(1920..2501)
                     /locus_tag="VIT19_11940"
     CDS             complement(1920..2501)
                     /locus_tag="VIT19_11940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839739.1"
                     /translation="MKEKEIKKNYLTALDPVLEQHHFIRRRNDQQWRHRIDDLNELWV
                     HINFGKAIVNPSVGVRYLDLELMLPQDFHPVPGAMTMLQTLVASADIYLIEEGSGRVG
                     RHLIEFGIPFLSKLSNREFVIERLKSQKGSDWPTPSYSHRIRLLPLLLGAEGRVAEAN
                     EFLNVFLAESPTRDQIAPGYERFVEVLREKLTG"
     gene            complement(2556..>3156)
                     /locus_tag="VIT19_11945"
     CDS             complement(2556..>3156)
                     /locus_tag="VIT19_11945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839740.1"
                     /translation="ISRVVLEPAQQRNVAFDSFFTHILMHEVVHGLGPHNITVNGQPT
                     TPRLQLKEKYSSIEEAKADVTGLWALQYLIDKGVIDRGMQRTLYTTYLASMFRSVRFG
                     ITESHGRGVALQFNYFTDEGAIKFNERTGKFSIDESKIRAAVIKLANELLTIEAEGSY
                     EKATAILDKYANIRPPMKGALDRLKSVPVDIEPIYPLAR"
BASE COUNT          707 a          855 c          865 g          729 t
ORIGIN      
        1 gttcggcact tcgcgggcgc agaaagcgaa tgtgtcggta atcagccgca gcgaaggttc
       61 aggcggaaag atgtacgtac cgcgcgcaat gtactctttc aaaatgtcgt tctgaatcgt
      121 gccttcgact ttgtcgaatg ccacgccctg cttccgcgcc acagcgagat acaggctcag
      181 cagaatcgcg gccgtcgcgt tgatagtcat cgacgtggaa acgttgtcga gacgaattcc
      241 atcaaatagc cgcagcatgt cttcgagcga atcgatcgcg acaccaactt ttccaacttc
      301 tccagccgcc agcggatcgt cggaatccag accgatttgc gtcggcagat cgaaggcaac
      361 cgacaaaccc gtcgtgccct gactcagcag gtatttgtag cgtgcgttcg attcctcggc
      421 gttcgcgtaa cccgcgtact gacgcatggt ccacaaccgg ccgcgataca tgttcggccg
      481 gatgccacgc gtgtacggga actcgccggg gtcagcgagg tctcgatcgt attgaacggg
      541 ctcggtgttc gaaggattga aatcaacggg cagttcgatg ccggaagaag tctcgaagtg
      601 ctcgcgtcgt tcggtttttt gcttggcgac catcggtgtt ggcggcaatc gcaggctagc
      661 acagcaaagt aggagcggca attgggtttt cactgtgacc gcgtttgcca ttcgccggtt
      721 gctgttttgg gccgcagagc ggccaaatgt ttatagcttc gcggcctcct aacgggctca
      781 gctccgtagg agcgaaatgt ttccgctagc ccgatcgtcg cgctcctacg gagcttagac
      841 atttttgttg aacttactct ataaacattt ggtccctccg ggctttaaaa cccagcgcag
      901 ccatcactcc gccacgggcc ttggaccatt tcgacaaagt tcggtttgtc cagcagaatc
      961 cattcaatgc gtgcgcttcg cgacattcgg gtcggtcccg ccggctggtc gtatgccgac
     1021 tggcgcggtc gcgtctatcc agaaggcgcc gggaccaggt tcgacacact gtcactggtc
     1081 gcgaagtatt tcgacacggc ggaaatcaac agcagctttt atcatcctcc gtcgcctgag
     1141 acggcccgtt cgtggctgcg ccgtatcgag cacaacccaa atttcgtttt cacggcaaag
     1201 ctctttcgcg cgttcacgca cgatcgcggc aaagcaaccg cggaagacga aaggctttgt
     1261 cgcgaaggac tggatccgct gatggaagcg gaaaagctag gcgcggtcct ggttcagttt
     1321 ccgtggtcat tcaagaacga gttggatgag cgcaattacc tgacccagct cgtcacgaaa
     1381 ttcaaagact atccgctggt cgttgagtta cggcacgagt catggaacaa cgcgcgcgtg
     1441 ctgcaaacgc ttgaagacct cggcgtcgga ttgtgtgata tcgatcagcc tttgtttcat
     1501 aactcgatca aaccgtccgc ggaagtaacg tccgacatcg gttacgtgcg tctgcacggc
     1561 cgcaattacc agaactggtt tcgtgaagaa gcgaacgtgc tggagcgtta cgactatctg
     1621 tatgggccgg aagaactcga gccctgggta gatcgaatca aagaggtcgc ggcaaaggcg
     1681 aaggaaacct tcgtcatcac gaacaatcat gcgcgcgggc agagtttggt gaatgccttc
     1741 gaaattctcg cggagctgga agaagaaaaa gtccccgggc cggcgaagtt aatcgagacg
     1801 tatccgcggt tggcggaatc ggttgagccg gatgatgaga agcagcagcc gtccttgttc
     1861 taatttggag tgcggtggca gagcgaagcg gcgacaccgc tttggattga ggcgctgcgt
     1921 caaccggtta gcttttcgcg aagaacctct acaaatcgtt cgtagcccgg agcgatttga
     1981 tcgcgggtcg gcgattcggc aagaaacaca ttcaagaatt cattcgcctc ggcaactcgt
     2041 ccttcggcac cgagaagcaa tggaagcagc ctaatccgat gtgaatacga tggcgtgggc
     2101 cagtccgagc ctttttgact cttaagtcgc tctataacga attctcggtt gcttaatttg
     2161 gagaggaaag gaattccgaa ctcaataagg tgacggccaa ctctgcccga accctcttca
     2221 atcaagtaga tgtcagctga cgctacaaga gtttgaagca ttgtcatcgc accgggaacc
     2281 ggatggaaat cttgcggcag cattaactca agatccagat agcgaacgcc gacacttggg
     2341 ttcacgattg ctttaccgaa gttaatatga acccatagct cattcaaatc gtcgattctg
     2401 tgccgccatt gttgatcatt tcgccgacga atgaagtgat gttgttcaag tactggatcg
     2461 agcgcggtaa ggtaattctt cttaatttcc ttttccttca cgataaacaa catccaaagc
     2521 gccgccgccg cttcgctctg ccggcgcact ccaaatcatc tcgccagcgg atagatcggc
     2581 tcgatatcca ccggcacgct tttcaatcta tccagtgcgc ctttcatcgg cggacgaatg
     2641 ttggcgtact tgtcgaggat cgccgtagct ttttcatatg agccttccgc ttcaatcgtc
     2701 agcagctcgt tagccagctt aatcaccgca gcacggatct tcgattcatc gatgctgaat
     2761 tttcccgtcc gctcgttgaa ctttatggcg ccttcgtcag taaagtaatt gaattgcagc
     2821 gccacgccac ggccgtgcga ttcggtgatg ccgaaacgaa ctgagcgaaa catgcttgcc
     2881 aggtaagtcg tgtacagcgt tcgctgcatc ccccgatcaa tcacaccctt atcgatcaga
     2941 tactgcaaag cccagaggcc ggtgacatcc gctttcgctt cctcgatcga cgaatacttt
     3001 tctttgagtt ggagacgtgg cgtagtcggc tggccgttta ccgtgatgtt gtgcgggccc
     3061 agtccgtgaa cgacttcgtg catcaggatg tgcgtgaaga atgaatcgaa ggcgacgttg
     3121 cgctgctggg ccggctccag caccacgcgc gaaatg
//
LOCUS       DATDBY010000637         2327 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2462750, whole genome shotgun sequence.
ACCESSION   DATDBY010000637 DATDBY010000000
VERSION     DATDBY010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2462750"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..944
                     /locus_tag="VIT19_11950"
     CDS             <1..944
                     /locus_tag="VIT19_11950"
                     /inference="COORDINATES: protein motif:HMM:NF018024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HEY5839741.1"
                     /translation="REASRPTRPVHTYSIVARDPATGELGVAVQSHWFSVGPIVAWAE
                     AGIGAVATQSFVDPSYGPLGLSLMRAGRSAPDALKALLAGDEARDVRQVAMIDSQGRV
                     DAWTGKNDIQAAGHQVGKNFSVQANLMLNDKVWPAMAAAFEAAKGDLADRMLAALDAA
                     QAVGGDIRGKQSAAIIVVTGKPTGQPWKDRTFDLRVDDSPEPLKELRRLVTLQRAYNH
                     MNAGDLAVEKKDNEGALREYAAAERLVPDNAEMIYWHAVALVNMGRVEESLPLFKRVF
                     AMDRNWIELTPRLPKSGLLPNDPKIIERIISVGNKTD"
     gene            1044..1877
                     /gene="kdsA"
                     /locus_tag="VIT19_11955"
     CDS             1044..1877
                     /gene="kdsA"
                     /locus_tag="VIT19_11955"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF003543.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEY5839742.1"
                     /translation="MSTEKKSFQVGSATFGDGRLAVIAGPCVIESAEHAMMMARECQQ
                     RARNAGLDFVFKSSFDKANRSSARSFRGLGMKDGLAILAAIKQELGVPVLTDVHDIAQ
                     IEATAEVADVLQIPAFLCRQTDLIVAAAKSGRVVNIKKGQFLAPEDARNIVEKARAAG
                     SDRIMLTERGVSFGYNNLVVDMRSFPIMSEFGVPIVFDVTHSLQLPGGLGHATGGLSQ
                     YIEPLARAGVACGVDAVFMEVHDAPERAPSDGPNMLPLERMGPLLESLRDIHALVNGS
                     N"
     gene            1888..>2327
                     /locus_tag="VIT19_11960"
     CDS             1888..>2327
                     /locus_tag="VIT19_11960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839743.1"
                     /translation="MKIGNRKFLLSLLLIVFCVSSGPAQEEARAAWQVTNFDINVANF
                     GSERALNARAVLTVRNIGRGSGTTLTLRINAKAEIKNITIGAATAVYRSQPEPRGGGQ
                     RVIITLPNSVAANESIAATVEYRLPVDENAGAAAISPVATQFLPA"
BASE COUNT          495 a          623 c          718 g          491 t
ORIGIN      
        1 agcgcgaagc gagtcggccc acacggccag ttcatactta ttcgatcgtc gcccgcgatc
       61 cggcaactgg tgaattgggt gttgccgtgc agtcgcattg gttttcagtt ggtccgattg
      121 tggcttgggc ggaagcgggc atcggcgcgg tagcgacgca gtcctttgtc gatccgtcgt
      181 atgggccgct cggactctca ttgatgcgcg caggccgcag cgcgcccgat gctttgaaag
      241 ctttgctcgc cggagacgaa gcccgcgacg tgcgccaggt tgcgatgatt gactcgcagg
      301 gacgcgttga tgcctggacg ggaaagaacg acatccaagc cgccggacat caggtcggga
      361 aaaacttttc agtccaggcc aacctgatgc tcaacgataa ggtttggccc gccatggccg
      421 cggcattcga agccgcgaaa ggtgatttgg ccgaccgcat gctggccgca ctcgacgcag
      481 cgcaagcggt gggcggcgac attcgcggga aacaatcggc ggcgataatt gtcgttaccg
      541 gaaaacccac gggccagcct tggaaagatc ggaccttcga tttgcgcgtc gacgacagtc
      601 ccgagccttt gaaagaactg cggcggctgg tgacgcttca acgcgcctac aatcacatga
      661 atgccggtga cttggccgtg gagaagaagg acaatgaagg tgcattgcgt gaatacgccg
      721 cggcggaaag actggttccg gataacgccg aaatgatcta ctggcatgcg gtggcgctgg
      781 tgaacatggg ccgggtcgag gaatctttgc cgcttttcaa gcgcgtgttt gcgatggatc
      841 gaaactggat tgagctaacg cccagattgc cgaagtcagg tttgctgccg aatgatccga
      901 agataattga gcggattatt tcagtcggaa ataaaacaga ttaatccgca gcttacgcag
      961 atgtcgccga ggagattctg cggaacctgc tgacaatccg tctttgcctt aaccctttcg
     1021 tcgattagac tcaatcctta acagtgagta cagaaaagaa atcattccag gttggctcgg
     1081 cgacgttcgg tgacgggcgg ctcgccgtaa tcgccgggcc atgcgtcatt gaatcggcag
     1141 agcatgcgat gatgatggcg cgcgaatgcc agcaacgcgc gcgtaacgcc ggtctggatt
     1201 tcgtgttcaa gtcttcgttc gacaaggcga accggtcgtc cgccaggagc tttcgtgggc
     1261 tgggcatgaa agatggcctg gcgattctcg ccgccattaa gcaagagctt ggcgtgcccg
     1321 tcctaactga tgttcacgac attgcgcaga tcgaagcgac ggctgaggtc gccgacgtgc
     1381 ttcagattcc cgcgtttctt tgccggcaaa ccgatctcat cgtagcggcc gcaaagtcag
     1441 gccgcgtcgt caacatcaaa aaaggccaat tcctggcgcc ggaggatgcg cggaacatcg
     1501 ttgagaaagc ccgcgcagca gggagcgatc gcataatgtt gactgagcgc ggcgtcagtt
     1561 ttggctacaa caatctcgtc gtcgatatgc gctcgtttcc gattatgagc gagttcgggg
     1621 ttcctattgt tttcgacgtc acgcattcgc tgcaattgcc gggtgggctg ggtcatgcaa
     1681 ccggcggctt gtcgcagtac atcgaaccgc tcgcccgtgc cggagtggct tgcggcgtag
     1741 atgccgtgtt catggaagtt catgatgcgc ctgagcgcgc gccgtcagac ggcccaaaca
     1801 tgttgcccct tgaaagaatg ggtccgctcc tcgaaagctt gagagacatt catgcgttgg
     1861 tgaatggttc gaattgaaaa ttgaaaaatg aaaattggaa atcgcaaatt ccttctttcg
     1921 cttcttctta ttgtgttttg cgtttcgagc ggccccgcgc aggaagaagc gcgcgctgcc
     1981 tggcaagtca caaacttcga tatcaacgtc gctaatttcg gcagcgagcg ggcgctgaat
     2041 gctcgcgcgg tgctgaccgt gcgaaacatc ggccggggct cgggtacgac tctgacgctg
     2101 cgcatcaatg cgaaagcaga gataaagaac ataacgatcg gggccgccac ggccgtctat
     2161 cgttcgcagc ctgaaccacg cggcggcggt cagcgcgtca tcattacttt gccgaactcg
     2221 gttgcggcga atgaaagcat tgcagcgacg gtcgagtatc gactgccggt cgatgagaat
     2281 gcgggggccg cggcgatctc gccggtcgcg acgcaattcc tgccggc
//
LOCUS       DATDBY010000638         4171 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1911082, whole genome shotgun sequence.
ACCESSION   DATDBY010000638 DATDBY010000000
VERSION     DATDBY010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4171
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1911082"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..476)
                     /locus_tag="VIT19_11965"
     CDS             complement(<1..476)
                     /locus_tag="VIT19_11965"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY5839744.1"
                     /translation="MTAASQTNSEFPRLKKILLPTDFSGCANYALPYAAAIARATNAR
                     IICVHVVEPVVPAVGYTGLADPMPIADISEQLEDSAERQLPKLAECEECAGLNVEEVI
                     VHGDAAAEIVRVASEQEADLIVISSHGRTGFGRIIFGSTAESVVRHASCPVLVVKPP"
     gene            592..1530
                     /locus_tag="VIT19_11970"
     CDS             592..1530
                     /locus_tag="VIT19_11970"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEY5839745.1"
                     /translation="MSASSNNFFAGVEVAPSLMRAAVVSADGEVVARREAPYQPDTFI
                     SDLAALVSILREAGDIQCVGLAVPGLVNRDADRVLLSTGMPSFVGADLHAELTKAIGT
                     KLELENDANAAAYGELHAGAARDALDFFYIYIGDNVGGAFIVNGKLWTGASGCAGEIG
                     HTMINPDGIQCECGNIGCLETVASAPNIARRARERLNRDSTSSLSRLAIHDDFTAADL
                     AHEATNGDDFSIMMIERTGKFIGTAVSGIINLLSPQRIVLGGAVMDAGELILAPIMKE
                     AGKRSFQPCFESTKIVAGELGVDAVSVGAALLARDT"
     gene            complement(1547..2197)
                     /locus_tag="VIT19_11975"
     CDS             complement(1547..2197)
                     /locus_tag="VIT19_11975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839746.1"
                     /translation="MTTEEQQEPTSTRVSIIARLVPAFSYLLPALGAGVSAMLLLSVL
                     RAMRNAEGAGIGAVAAGISEANLAILVTLYLAIIVGGAGVVIGLVRLFTTTTTASPSA
                     WYYLIAGILGLIPMFALWRAQSLLLDAIFPHSAGAGVSEVAGQITLFSIVAAVLGVVS
                     ILILLASSFVPLPAVLRGKRKWAPLIALLVMETAIIAMTVVYHLRTAWLYSSFRDY"
     gene            complement(2200..3369)
                     /locus_tag="VIT19_11980"
     CDS             complement(2200..3369)
                     /locus_tag="VIT19_11980"
                     /inference="COORDINATES: protein motif:HMM:NF014346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY5839747.1"
                     /translation="MKRTVLKLTAVTLTAIAVFVISNRNTQAEIAAAPVAPQDKPVEQ
                     VRKNIKVLTGLPDSQLIPVMNFMSASLGRRCNFCHITDKGRDGYALDDKPEKNTAREM
                     IKMVLGLRKQSFHGADEISCFTCHRGQTRPVNVPALPLPTPLPRPSATPAAATGTAPT
                     QPSGPPAPQPTPTADEIYSKYIAAIGGQANVDKIKSRTARATVAQPNGSVNVDIAQAA
                     PDKFLITATTPTGAFERGFNGSVGWEKGPQGVRVLSPAEVAQLQNSIGLLRHIRLKEQ
                     FTSLRWRGLQSIGEQRTHLVIGTTADNRQERLFFDTQTGLLLRRISYMATLLGLIPEQ
                     IDFEDYRDVDGVKFPFTIRISSIEVGNPVSTRAFSAMKLNVAVDDAKFNMPAATP"
     gene            complement(3548..>4171)
                     /locus_tag="VIT19_11985"
     CDS             complement(3548..>4171)
                     /locus_tag="VIT19_11985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839748.1"
                     /translation="SYVNSMVDLAAKRLKSKGFSVAPHLVEIAKRLCIVEHVDHERFR
                     NENRIALYDEIYSLYALNELDTYRFSVSSAGAGGMVQMIPWTYRLMRERHGAIGLNPD
                     FVLGMRNHGNALEAMLLYMQDTWNDLVANEEVRAGLESKQITPHELMAAGYNSNAAKI
                     PGYIRRGGIPGWKTLIPRETQMYLQIYHSFETLMKAKANHARRLAKR"
BASE COUNT          864 a         1209 c         1223 g          875 t
ORIGIN      
        1 gggggcttca cgacgagcac ggggcaactg gcatgtcgca ccaccgactc ggcagtcgat
       61 ccgaaaatga ttcggccaaa tccggtgcgg ccgtgcgaag aaatcacgat caaatccgct
      121 tcctgttcag acgcgacgcg aacgatttcg gcggccgcgt cgccgtgcac gatcacttct
      181 tcgacgttga ggccggcgca ctcttcacac tcagccagct ttggcaattg acgctcagcc
      241 gaatcttcga gctgttcact gatgtctgca atcggcatcg gatcggcgag cccggtgtag
      301 ccgaccgcgg gcactaccgg ctcgacgacg tgaacgcaaa tgatccgcgc gtttgtcgcc
      361 cgtgcgatgg ccgccgcgta cggcagcgca taattcgcac agccgctgaa gtccgtgggc
      421 agcaggatct tcttgagtcg gggaaactct gagttggttt gacttgccgc ggtcattgaa
      481 ttcgcgggca attctacacg caccagacgc cgtttgacag cctaagacgc gtcgcataag
      541 atcgccccga aattcctgcc cgctctaatt cattcgaaag aacctgtgcc tatgtctgcg
      601 tcctccaata acttttttgc cggtgtggaa gtcgcaccga gcttgatgcg cgcggccgtc
      661 gtctctgcgg acggcgaagt cgtagccaga cgcgaagcgc cttatcaacc tgacacattc
      721 atctccgacc tggcggctct ggtttcgatt ttgcgcgaag ccggcgacat tcaatgtgtc
      781 ggactggccg tgccgggcct cgtcaatcga gacgctgatc gcgtgctgct ttcgacgggc
      841 atgccgtcgt ttgtcggcgc cgatttgcac gcggaattga cgaaagccat tggcaccaag
      901 ctcgagcttg agaatgatgc gaacgcggca gcctacgggg aattgcacgc cggcgcggcc
      961 cgcgacgcgc tcgacttctt ttacatctac attggcgaca atgttggcgg cgcgttcatc
     1021 gtcaacggaa agctttggac aggcgcgtcg ggatgcgccg gcgaaattgg ccacacaatg
     1081 atcaatcccg acgggattca gtgcgagtgc ggcaacattg gatgcctcga aacagtagca
     1141 tcagcaccta acattgcgcg gcgggcgcgc gaacgtctga atcgcgattc gacctcttcg
     1201 ctgtcacggc tcgcgatcca cgacgatttt accgcggccg acctggctca cgaggcgacc
     1261 aacggtgacg acttttcgat catgatgatc gaacgcacgg gaaaatttat tggcaccgcc
     1321 gtctcaggca ttatcaatct gctgagtccg cagcggattg ttctgggtgg cgccgtgatg
     1381 gacgcaggcg agctgatcct tgcgccgatc atgaaggagg ccggcaagcg gtcattccag
     1441 ccctgcttcg aatcgacgaa gattgttgcc ggcgagttgg gtgtggatgc ggtctcggtg
     1501 ggcgcggccc tcttggcgcg cgatacttaa actgcgttgt gcgcgatcag tagtcgcgga
     1561 agctgctata caaccacgcc gtccgcaggt gatagacgac agtcatcgcg ataatcgcgg
     1621 tctccatcac gagcagcgca atcaaagggg cccacttcct tttcccgcgc agtaccgccg
     1681 gcagaggcac aaacgagctc gcgagcagaa tcaggatact caccaccccc aaaaccgccg
     1741 ccacaatcga gaaaagagtt atttgaccgg ccacctcgga aactccggct ccggctgagt
     1801 gcggaaagat cgcgtccaac agaagtgatt gcgcgcgcca gagcgcgaac attggtatga
     1861 ggcccaggat tcctgcaatc aggtagtacc acgcggaagg tgacgccgtg gtcgtggtcg
     1921 tgaacaatcg caccagaccg atcaccacac cggcgccgcc gacgataatc gcaaggtaca
     1981 gggtcacgag gatagcgagg ttcgcctcgg aaatgcctgc tgcaaccgcg ccgatcccgg
     2041 cgccttcggc attgcgcatt gcgcgcagca cactcaaaag gagcatcgcg ctaactccgg
     2101 caccaagcgc cggcagcagg taagaaaacg caggcaccag gcgcgcgata atgctgacgc
     2161 gcgttgatgt tggttcttgt tgttcctcag ttgtcatggc tacggagtcg cggctggcat
     2221 gttgaacttt gcgtcgtcca ctgccacgtt tagtttcatt gcggaaaaag cgcgtgttga
     2281 aacgggattg ccgacttcga tagacgaaat ccggatcgtg aacggaaact tcacgccatc
     2341 cacgtcgcgg taatcttcga aatcgatctg ctccggaatc agaccgagca gcgtcgccat
     2401 gtatgagatt cggcgcagca acaagccagt ctgagtgtca aagaagagtc gctcttgccg
     2461 gttgtcggca gttgtgccga tgaccaggtg agttctttgc tcgccaatcg actggaggcc
     2521 gcgccaacgc aagctggtga actgttcttt cagacggatg tggcgtaaca agccgatgga
     2581 attttgcaac tgcgctactt ccgcaggcga aagcactcgc acgccttgtg ggcccttctc
     2641 ccagccaacg ctgccgttga atccgcgctc gaacgcgccg gtcggagttg tcgccgtgat
     2701 aagaaacttg tccggcgcgg cttgcgcaat atcaacgttt actgacccgt tcggttgcgc
     2761 caccgtggcc ctcgcggtgc gcgacttgat cttgtcgacg ttagcctgac cgccgatcgc
     2821 cgcgatgtat ttgctgtaga tttcatcggc agtgggagtt ggctgtggcg ccggagggcc
     2881 agagggttga gtcggagcag taccggttgc cgcagcgggt gtcgcagacg gtcgcggcaa
     2941 aggagttgga agcggcagcg ccggcacatt taccggacgc gtttgtccgc gatggcatgt
     3001 gaagcaactg atctcatcgg cgccgtgaaa gctctgcttg cgcaggccca gcaccatctt
     3061 gatcatttcg cgcgccgtgt tcttctccgg cttgtcatcg agggcgtatc cgtcacgacc
     3121 cttgtcggta atgtgacaaa agttacagcg ccgccccaat gacgcggaca tgaaattcat
     3181 gaccggaatc agctgtgaat ccggcagtcc ggtgaggacc ttgatgttct ttcgcacctg
     3241 ctcgaccggt ttgtcctgag gcgcaacggg cgcggcggca atctccgcct gcgtgttgcg
     3301 gtttgagatt acgaacacgg cgatcgccgt cagcgtgaca gcagtgagct tcagaacagt
     3361 tcgcttcatc ttgcggctcc tcgatcggat tttggggtgg acggccaaga tagttgaaag
     3421 tccaggaaag cgcaaaacga aaaacgcccg gcgttttaag ccaggcgttt cttgcagaag
     3481 cccgcgcgtc agcaagggct acttatgaga tctcaacaac cctccctaac ggtcgggctt
     3541 ctgacagcta tcgcttcgca aggcggcgcg cgtgattcgc tttcgccttc atcagcgtct
     3601 cgaacgagtg atagatctgg agatacatct gcgtctcgcg tggaatgagc gttttccagc
     3661 cgggaatccc gccgcgccgg atgtaaccag gaatcttcgc cgcgttcgag ttgtagcctg
     3721 ccgccatcaa ctcatgtgga gtgatttgct tcgattcgag ccccgcccgc acttcttcat
     3781 tggccacgag atcgttccag gtgtcctgca tgtagagcag catcgcttca agcgcattgc
     3841 cgtgattgcg catgcccagg acaaagtcgg gattcaaccc gatagccccg tgacgttcgc
     3901 gcatcagtct gtacgtccac ggaatcatct gcaccatgcc acccgcgccg gccgaactca
     3961 ctgaaaaccg ataggtgtcg agttcattca gtgcgtacag cgaataaatc tcatcgtaga
     4021 gtgcaattcg attttcgttg cggaagcgtt cgtgatcgac gtgctcgaca atgcaaagcc
     4081 tcttcgcgat ttccacgaga tgcggggcga cggaaaagcc tttggattta aggcgtttgg
     4141 ccgccaaatc aaccattgag ttgacgtagg a
//
LOCUS       DATDBY010000639         6934 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1437152, whole genome shotgun sequence.
ACCESSION   DATDBY010000639 DATDBY010000000
VERSION     DATDBY010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 6934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6934
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1437152"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..883
                     /locus_tag="VIT19_11990"
     CDS             <1..883
                     /locus_tag="VIT19_11990"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839749.1"
                     /translation="IQRLERAVELKPDYAVAYAELADCYALLNWYVEPPPAHAWQRAK
                     QAALSGVRADPNLAEAHASLGFVRLHFDRDWEGAERELQKAIVLNPRNQVSHRWYAYS
                     LSAMGRHDEAYAEIERAREITPQSAVIATALANVLFLAGRFDDTIAQCRKALELDPGA
                     VAAHTVLRWAYEQKGMVPEALAAYEQERSFAGDSPTTRAKRAHVLAATGHQDEARKIL
                     EEIIAKRDEQWVTAYEIAIIYSLLGDCDKGFEWLAQAEQEHAVGFTFVRVDPHLENLR
                     SDPRFRDLIRGTDRTIP"
     gene            962..1231
                     /locus_tag="VIT19_11995"
     CDS             962..1231
                     /locus_tag="VIT19_11995"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY5839750.1"
                     /translation="MKANKPKRLAEKLLQIRLSLGLSQGELIRGLGVEDATTPSYISE
                     YETGQSEPPLLILLRYARVAGVSVDVLIDDELDLPVKLPAHPPKR"
     gene            1478..2221
                     /locus_tag="VIT19_12000"
     CDS             1478..2221
                     /locus_tag="VIT19_12000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839751.1"
                     /translation="MAARAEVLNTGTSIDKRRAERIFYTAMSVAILITVFAGFSRTFF
                     LRPYFQTQPLMPFLIAHGIIFSGWIVLFLTQTTLIVAKRTRLHMRLGIAGGLLASLMI
                     IIGVYTALVRAKGPSPIPDVNPLSFLTIPLGDMLLFGILVGAALYFRRRADTHKRLML
                     LSTIAILPAAVARLPFSFIETGGPLVFFGLSDLFILPMLVFDIITRGHPHRATLLGGA
                     LIVISHPLRMVIGGTQAWLAFATWITQWV"
     gene            2393..3622
                     /locus_tag="VIT19_12005"
     CDS             2393..3622
                     /locus_tag="VIT19_12005"
                     /inference="COORDINATES: protein motif:HMM:NF021466.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008195 - phosphatidate phosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase domain-containing protein"
                     /protein_id="HEY5839752.1"
                     /translation="MKLHTHLALLVILMAALSSGWCGNRKSPPPHAEPLQSLPAAPAR
                     LPVLEKEVTFYPTYGYRAGTNWNSQLRGWVHEDRKKRAEGAVQILKLVAKCNDAEETT
                     VRSRSADFVDDNKTSEKVLVKFDSDPDNKAYEFTESKGDGIVKLDLVLTDDQAKRLLE
                     QQKSPNGWLTYRAVSKDHTGLGRVRLIERDPNGVSLISDIDDTIKVTDIPAGKETVLR
                     NTFCLDFKSVAVPDMAAAYKELGDIPVHYVSGGPEQLFGPLYDFLITGPGAFPEGTFH
                     LKFFSTRPSLESANTLMRFLGSSLQVTFNHKRDEINALMDKFPERKFILVGDSGEIDP
                     EVYNEIRKKRPAQVQEIRIRDLINDNVVNNFRLTGMTVIPVNPTVCVDDKHFDKLLEK
                     MQEHHTEEYVRNPACPR"
     gene            complement(3837..5657)
                     /locus_tag="VIT19_12010"
     CDS             complement(3837..5657)
                     /locus_tag="VIT19_12010"
                     /inference="COORDINATES: protein motif:HMM:NF012700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839753.1"
                     /translation="MNEGGLLNKSEEHLPTEPQIEYTRRREARLAEAARQMLRFRKVG
                     VVRLASLAAGLALLWPVFNGLAFWWLLPPAIVFVILAEPQARFSRAKRRCERAAALYD
                     DGLARLDNRWAGKGATGERFLDNSHPYAADLDIFGSGSLFELLSRARTRAGEETLAHW
                     LLQPAAPDVVRARQAAVSELRPRLGLREDLALLGEGVRSGEEAQSLSAWATAPPWHVS
                     PWLRATAIVLALLAVVTLILWVAGFGITPFLIVLIMGRAFAFRYRAPVGRVVSAVNAA
                     GRDLALLSGVLGRLEKEQFTSPRLVELRAALDVEGLAPSRQIARLNRLIDLLDAQRNV
                     IFAPLAAILLWPVQLAIAIEGWRRSSGPAVVRWLAAVGEFEALSSLAGHAYERPHDPF
                     PELTEGGMCFEGEGLGHPMIPESRNVRTNLHLSDKQKRVLIVSGSNMSGKSTLLRTVG
                     TNTVLAMAGATVRARRLRLSQLQVGASIRIQDSLQAGASRFYAEITRLREIVGLTEKA
                     PRVLFLLDEILHGTNSHDRRIGAEGVVRGLIERGASGLVTTHDLTLARIADELAPQAA
                     NVHFEDHLEGGKISFDYQLRPGIVQRSNALELMRSVGLEV"
     gene            complement(5932..6399)
                     /locus_tag="VIT19_12015"
     CDS             complement(5932..6399)
                     /locus_tag="VIT19_12015"
                     /inference="COORDINATES: protein motif:HMM:NF016178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HEY5839754.1"
                     /translation="MVDARVDDYWQRFLSTREDGADLQSRGYVVDSFGDSPEMASELA
                     SLIVAGVKTATCSSVWEWDDTANPMPRQGLLTVVVDGARTPRCIIETVSVETATFEAV
                     GAEFAYAEGEGDQSLEYWRRVHWDYFTRVLPKLGHEPSLTMPVVCEHFRVLYR"
     gene            complement(6446..>6934)
                     /locus_tag="VIT19_12020"
     CDS             complement(6446..>6934)
                     /locus_tag="VIT19_12020"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEY5839755.1"
                     /translation="NGFDYEAIQRAWEHAQKEADKEAKQTGEDDSWLPNLPDFKRGAS
                     TISQQLVKNLYLSSERSFMRKGQEAVITYFMERNLPKKRILEVYLNVIEWGDGIYGAE
                     AASQYYFHKPAANLNAREAAFLSAMIPNPRTVFNPQVNPKRVARRQRIIMRGMPSVKM
                     PG"
BASE COUNT         1495 a         2011 c         1998 g         1430 t
ORIGIN      
        1 gattcaaagg ctcgagcgcg cagtcgaact caaaccggat tacgcagtcg cttatgctga
       61 gttggcggac tgctacgcac tgctgaactg gtacgtcgag ccgccgcccg cccacgcctg
      121 gcaacgcgcg aagcaggctg cgttgagcgg cgtaagggcc gatccgaatc tggcggaagc
      181 gcacgcatca cttggctttg tccggctgca ttttgatcga gactgggaag gcgcggaacg
      241 cgaacttcag aaagccatcg tattgaatcc gcgtaaccag gtttcgcatc gctggtacgc
      301 gtacagtttg tcggcgatgg ggcggcacga cgaggcgtac gcggagattg aacgcgcccg
      361 agaaataacg ccacagtcgg cggtgatcgc gacggcgctg gccaacgtgc tgtttctcgc
      421 cgggcgtttc gacgacacga ttgcccagtg tcgcaaggcc cttgaactgg atccgggcgc
      481 cgtggcggcg cacaccgtgc tgcgctgggc ttacgaacag aagggaatgg tccctgaagc
      541 tttggcggct tacgaacagg aacgcagttt tgccggcgac agtccgacga cgcgcgcgaa
      601 acgagcacac gtcctggccg cgaccggtca ccaggatgaa gcgcgcaaga ttctcgaaga
      661 gatcattgcg aaacgcgacg aacaatgggt gacggcctat gagattgcga ttatttactc
      721 gttgttagga gactgcgata aaggatttga gtggctggcg caggctgagc aggaacacgc
      781 cgtcggcttc actttcgtcc gcgtcgatcc tcatcttgag aacctgcgtt ctgatccgcg
      841 attcagagac ttgattcgcg gcaccgatcg aacaattccg taaccctggg agcccgggca
      901 tcctgcccgc atcgggtgtt gcgagaaatg tctagcgaat gtctttcgtt ggagacgaaa
      961 aatgaaagca aacaaaccga aacgactggc tgaaaagttg ctccagatcc ggctgagcct
     1021 cggcttatcg cagggcgagt tgataagagg attgggcgtt gaagacgcca ccactccttc
     1081 atacatctca gaatacgaga cgggtcaaag cgagccgccc ttgctgatcc tcttgcgtta
     1141 cgcgcgtgtg gcgggcgtct ccgtcgatgt gttgattgat gatgaattgg atctgcctgt
     1201 gaaattgcct gcacatccgc cgaaacgttg atcgtggcct cgctggagga gtgcgttgag
     1261 aattgtactc aacgaggcgg aagagaatgc cttgggatga caaaacgcag attcaaacga
     1321 aggccttgcg ctatggtgat ccaacctccc ggagcacagg tacgctccca gcgagtttgc
     1381 tattgaattt ctcgttcgcc tgagttaaag aagctcccat tatcaaagca cggattgagc
     1441 cggcttagtc aggagttgag aggagaaaag aaaacggatg gcggcacgag cggaagtctt
     1501 aaacaccgga acctcaatcg ataaaagacg cgccgaacgg atcttctaca cggcaatgtc
     1561 cgtggcgatt ctgattacgg tcttcgctgg tttctcacgg acattttttc tgcgaccgta
     1621 ctttcagacg cagccactga tgccgttcct gatcgctcac ggaatcattt tttccggctg
     1681 gattgttctg ttcctgacgc agacgacgct cattgtggcc aagcgcacac gtctccacat
     1741 gcgcttggga atcgccggag gcctgctcgc gagcctcatg attattatcg gcgtgtacac
     1801 ggcactcgtc cgcgccaagg gtccgtcacc catacctgac gtaaatccgc tcagtttcct
     1861 gacgataccg ctgggcgaca tgctgctgtt cggaattctg gtcggcgccg cgttgtattt
     1921 tcgacggcgc gccgatacgc acaagagatt gatgttgctg tcgacgatcg ccattctgcc
     1981 ggccgcggtc gcgcgcctgc cgttcagttt catcgaaacc ggtggtccgc tcgtcttttt
     2041 tggcctcagc gatcttttca tcctgccgat gctcgtcttc gacatcatca cccgcggaca
     2101 cccgcatcga gcgactttgc tgggtggtgc gctcatcgta atctcgcacc ccttgcgaat
     2161 ggtcatcggc ggcacgcaag cctggcttgc gttcgccaca tggattacgc agtgggtttg
     2221 aaatattcct gcggactaag ccatctctat tggacgtcta gtcagccacc tgaaggtaaa
     2281 tgcagtcagg aaggtgggct tgcccccgcc taatgttcaa gcggcggcaa gccgctcttc
     2341 ctgactgcaa taaaccatga ggatctttgg ttttttcgaa agaaggtcat agatgaaatt
     2401 acatactcac ctggcgcttc tcgtcattct catggccgca ctgagttccg gttggtgtgg
     2461 taaccggaag tcaccaccac cacatgctga gccgctgcag tcattgccgg ccgcaccggc
     2521 ccggctgcca gtgctggaaa aagaggtcac cttctatcca acttacggct accgggcggg
     2581 gacaaactgg aattctcaac tgcgtggttg ggtccatgag gaccggaaaa aacgggcaga
     2641 gggcgcggtt cagatcctca aactggttgc caaatgcaac gacgccgaag agaccactgt
     2701 ccgatcgcgc tcagccgact tcgtcgatga caacaaaacc tctgaaaagg tgttggtaaa
     2761 gttcgattct gaccctgata acaaagcata tgaatttacc gagagcaagg gtgatgggat
     2821 cgtcaaactc gatttggtcc tcaccgacga ccaggccaag cggttgctgg aacaacagaa
     2881 atcgcccaat ggctggttaa cctatcgcgc agtgtcaaag gaccataccg gtttgggacg
     2941 agtcaggtta atcgaacgag atccaaatgg agtctccctc atctctgaca tcgacgatac
     3001 gatcaaggta accgacatcc ctgcaggtaa ggaaaccgtc ctacgaaaca ctttctgtct
     3061 tgatttcaaa agcgtcgcgg ttcccgacat ggccgcggct tacaaagagc tcggcgatat
     3121 tcccgtccac tacgtttcgg gcggacccga gcagttgttt gggccgctct atgattttct
     3181 gatcactggt ccgggcgctt tcccggaagg gacgtttcat ctgaaatttt tctcgacccg
     3241 tccttcgctg gaatcggcga atactctcat gcgattcctg gggagctctt tgcaggtaac
     3301 gtttaaccac aagcgcgacg agatcaatgc gctgatggac aagtttcctg agaggaaatt
     3361 cattctggtc ggagactcgg gagagattga ccccgaggtc tacaacgaga tcagaaagaa
     3421 gcggccggcc caggtccagg aaatccggat tcgagacctc atcaacgata acgtcgttaa
     3481 taacttcagg ctgacgggga tgactgtgat cccggttaac ccgaccgtct gcgtcgacga
     3541 caaacatttc gacaagctcc tggaaaagat gcaggagcac catacagaag aatacgtccg
     3601 gaatccggct tgccccaggt agaactgacg caacagagtc ccgattggtc tggagtcgag
     3661 tgtggggaag cagaacgcgg agtttagcgg gcgggcgctg ccctcattgt gatctcgcac
     3721 cccttgcgaa tggtcatcgg cggcacgcaa gcctggcttg cgttcgccac atggattacg
     3781 caatgggttt gaatcgcgtg aacgtaaagt gctggcatca cctcggtttg ttcgattcag
     3841 acctcaagcc cgactgagcg cattaattcg agggcgttgc ttcgttgaac tatgccgggg
     3901 cgcaactgat agtcgaagct tatcttcccc ccttcgaggt gatcctcgaa gtggacgttg
     3961 gccgcttggg gtgcaagctc gtcggcgatg cgcgccagcg taaggtcgtg agtcgtgacc
     4021 agcccactcg cgccgcgctc aatgagaccg cgcaccacgc cctccgctcc tatgcggcgg
     4081 tcatgcgagt tggtcccgtg caggatttca tcaagcagga aaagcacccg aggcgccttc
     4141 tcagttaaac ccacgatctc gcgcagacgc gttatctccg cgtaaaagcg cgaggccccg
     4201 gcctggagcg aatcctgtat ccgaatcgag gcccccacct gaagttgcga gaggcggagc
     4261 cggcgtgcgc ggaccgtcgc gcccgccatc gccagcaccg tgttggttcc tactgtgcga
     4321 agcagagtgc tctttcccga catgttcgag ccgctgacga tgagcacgcg cttttgcttg
     4381 tccgacaggt gcaggttcgt gcgcacgttc cgggattcgg ggatcatggg atgacccagc
     4441 ccttcgcctt cgaagcacat cccgccctcc gtcagctccg ggaaaggatc gtgcgggcgc
     4501 tcgtaggcat ggcccgcgag agaactgaga gcctcaaact cgccgaccgc ggcgagccag
     4561 cgaaccacgg ccgggccaga gcttcggcgc caaccttcga tcgcgatggc aagctgaaca
     4621 ggccacagta agatggcggc cagaggcgca aatatcacgt tgcgctgggc gtcgagtaga
     4681 tcaatcaaac ggttgagcct ggcgatctgt cgtgacggag ccaggccttc aacgtcgagc
     4741 gcggcgcgca actcaaccag gcggggactt gtgaattgct ccttctcaag ccggcccagc
     4801 actcccgaca ggagcgcgag gtcgcgcccc gcggcgttaa cagcgctgac gacgcgcccg
     4861 accggtgccc gatagcggaa ggcgaaggcc ctgcccataa tcagcacaat gagaaaggga
     4921 gtaatgccga atccggcgac ccacaggatg agagtgacga cggcgagcaa cgccagcact
     4981 atcgccgtcg cgcgcagcca gggagagacg tgccacggcg gggcagtggc ccacgccgag
     5041 agcgattgcg cctcttcgcc ggagcggacg ccttcgccga gaagcgcgag gtcttcacgc
     5101 aaacccaggc gcggacgtag ctcagacaca gccgcctgcc gtgcgcgcac cacatcaggc
     5161 gccgccggct ggagcagcca gtgggcaagc gtttcttcac cggcgcgggt gcgcgctctt
     5221 gaaagcaatt cgaagagtga gccgctgccg aatatatcca ggtcagcggc ataggggtga
     5281 gagttgtcga ggaagcgctc gcccgtcgcc ccctttccgg cccaacgatt atcgagcctg
     5341 gccagcccgt catcgtaaag ggcggcggcg cgttcgcagc gccgctttgc tcgtgaaaag
     5401 cgcgcttgtg gttcggccag gatcacgaag acgatcgccg gaggtaggag ccaccaaaaa
     5461 gccagcccat tgaacacagg ccacagcagc gccaacccgg cggccagcga tgcaaggcgc
     5521 acaaccccga ccttacgaaa ccgcagcatc tggcgggccg cttccgcgag acgcgcttcg
     5581 cgccggcgcg tatattcgat ttggggctcc gtcggcagat gttcttctga tttgtttaag
     5641 agaccgccct cattcatacc agcagtttaa actattcact ttgagtccaa ggcaaacgcc
     5701 gcgctatctc atagtccggt gcaacgacat ttagttggcg tcgcgtgagt caatcaattc
     5761 cgaacttatt gttgagtcga tttcgacgac tctgagagca ggcaggtcga gctactgagg
     5821 cggggagctt cgagtcggga tccgcgacgc ccctggatgg aacgatcaac cggcaatcac
     5881 cggctggaca acttgttcga gatctcatga caaccgacag gtacgccaca cctagcggta
     5941 cagaacacgg aagtgttcgc acacgaccgg catcgttaac gatggctcgt gtccgagttt
     6001 tggcaatact cgcgtgaagt agtcccaatg cacgcgccgc caatactcga gtgattggtc
     6061 tccctcgcct tccgcgtatg cgaactcggc gcccacggcc tcgaatgtag ccgtttcgac
     6121 gctgaccgtc tcaatgatgc atcttggcgt tctggctccg tcgaccacga cggtaagcag
     6181 tccttgccga ggcatcggat tggccgtatc gtcccactcc caaacgctcg agcacgtcgc
     6241 ggtcttcacc ccggccacta ttagcgaagc gagttcactg gccatttcag gactgtcgcc
     6301 aaagctatcc actacgtacc cgcgcgattg aaggtcggcc ccatcctcgc gcgttgaaag
     6361 aaaccgttgc cagtaatcgt cgactcgtgc gtcaaccatt tgcccgcctc tgcgccgggc
     6421 ctcgattcaa agacgaaaga tacctttaac ccggcatctt cacgctcggc atgccccgca
     6481 tgatgatgcg ttgccggcgc gcgacgcgct ttggattaac ttgaggattg aaaaccgtgc
     6541 gcgggttcgg aatcatcgcc gacagaaaag cggcttcgcg cgcgttaaga tttgccgccg
     6601 gtttgtgaaa gtagtattgc gaagcagctt cagcgccgta aatcccatcg ccccactcga
     6661 tcacgtttag ataaacctca aggatgcgct tcttcggaag gttccgttcc atgaagtaag
     6721 tgatgacggc ttcctgacct ttgcgcatga atgagcgctc gcttgagaga tagagattct
     6781 ttaccagctg ctgcgagatg gtcgacgctc cccgcttgaa gtcaggcagg ttcggcagcc
     6841 acgaatcatc ctctcccgtc tgcttcgctt ctttgtcggc ttctttctgc gcgtgctccc
     6901 aggcgcgttg aatcgcttcg taatcgaatc cgtt
//
LOCUS       DATDBY010000640         4640 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_682130, whole genome shotgun sequence.
ACCESSION   DATDBY010000640 DATDBY010000000
VERSION     DATDBY010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4640
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_682130"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..852)
                     /gene="leuB"
                     /locus_tag="VIT19_12025"
     CDS             complement(<1..852)
                     /gene="leuB"
                     /locus_tag="VIT19_12025"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: protein motif:HMM:TIGR00169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEY5839756.1"
                     /translation="MQLKIVILPGDGVGPEVTEQAVRVLREVANIHGHNFLLEEHQAG
                     GAAIETSGSPLPRPTLDACLSADAVLLGAVGTPAFDHLPFDKRPEAGLLRLRQALGGF
                     ANLRPVTTYRALADASPLRRELAETVDILIVRELLGGLYFGEPRGIASQNGNSVAFNT
                     MRYSVAEIERVSRVAFEAAMKRRRKVTSVDKANVLETSQLWRQTVSRIARDYPQVELD
                     HLYVDAAAMHLITNPRRFDVLLTENLFGDILSDEASVITGSLGMLASATIGGAVDLYE
                     PVHGSAPD"
     gene            complement(878..2092)
                     /locus_tag="VIT19_12030"
     CDS             complement(878..2092)
                     /locus_tag="VIT19_12030"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: protein motif:HMM:NF002086.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEY5839757.1"
                     /translation="MTERVRIFDTTLRDGEQSPGCSMNLPEKVQLARKLEELGVDIIE
                     AGFPIASDGDFAAVKAVAAQCRSVRVAALCRTSEQDVSRAAEALRGAAHPRMHTFVAT
                     SDIHLEYKLKKSRAEVLDMTRAAVRLARDYAEEVEFSAEDATRSDVNYLCDVFSVAIE
                     EGATILNVPDTVGYTLPNEFTQLIRTVRERVIGERDDITISVHCHNDLGLAVANSLAA
                     VDAGARQIECTINGIGERAGNASLEEIAMAMRVRGDRLPFETGIDTRELYPTSQLLSQ
                     IIGFGVQPNKAIVGRNAFAHEAGIHQHGVISNPLCYEIMTPESVGVPANELVLGKHSG
                     RHALALRYQELGYTLDAAELKSVYHRFTQLADRKKRIYDQDLISLVGTKAKRAVAMIP
                     PEREQWARRATA"
     gene            2244..3149
                     /locus_tag="VIT19_12035"
     CDS             2244..3149
                     /locus_tag="VIT19_12035"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY5839758.1"
                     /translation="MDISQLQVFLSVAQEKSFSRAAEALHRTQPAVSQSIRRLEAELG
                     EPLFDRSSKDGTLTAAGKVLFDFAQQMMNLRQHAHTAIRELRDLHRGKLTLSANEYTV
                     MGLLPLIPTFRARHPHIKVEVKRSFASRIPSEILGRDVEIGVVTFKPSDASISSLPVT
                     TDELALIVAPDHPLAGRETISVRELGAETFIAHNVPSPYRERVVKTFEKYRTPLNISM
                     EMPTLEAIKRMVENRMGVALVPRLTAQTEIERGLLVGLTVKEMRLERKLHLIYRKGAT
                     LSHAAKAFLRVAREPATKTPRTAAV"
     gene            complement(3219..3731)
                     /locus_tag="VIT19_12040"
     CDS             complement(3219..3731)
                     /locus_tag="VIT19_12040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839759.1"
                     /translation="MTNKRLPNFVLVLPMVLLAGLCFGQKQTSHQKPDFTGTWVLDRS
                     QSNVDSGISDYVLTIIHREPDIRMTKQYKRGKKQITEELEYHTDGKAEANPNQRPDDP
                     SPETKWNGPKLVRRSVSRPAGRGSLVVEMVTYEEWSLSSDQQTLTRAVEMTMGPSLIA
                     KMKSVFKRRQ"
     gene            complement(3752..>4640)
                     /locus_tag="VIT19_12045"
     CDS             complement(3752..>4640)
                     /locus_tag="VIT19_12045"
                     /inference="COORDINATES: protein motif:HMM:NF023591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839760.1"
                     /translation="LAIVDDIVMRGHNLRNFCREVLAHLRDLLVVKVSADPKILDSAS
                     THAAALKQQAEQFSESDLVRFFHSLAETESTLKDAANPRYQVEVGLVKLMEMRRLAPL
                     GDLVERIAALESALRTGKGPAEKASLRTETATPTITRPSPTASNVPFESVASAETASA
                     EPSAAKTNTFCDNVKAKLKQKRRPLLVAALDGAVRAELEGDEFLVEFTQENKHYRNTL
                     ARADNAKALREACADSAGREVGIRYIIKSEDDAATSTNVTPDAREAKQKARHAAAADP
                     TVQQVQRTFGAEIIDVKQL"
BASE COUNT          953 a         1348 c         1299 g         1040 t
ORIGIN      
        1 gtctggcgct gaaccgtgca ccggctcgta caaatccacg gcgccaccga tcgtcgctga
       61 cgctaacatc ccgagggatc ccgtaatcac ggacgcttcg tccgacagaa tgtcgccgaa
      121 caagttttcc gtcagcaata catcaaatcg cctggggttc gtaattaagt gcatcgcggc
      181 ggcatcgacg tacaagtgat cgagttccac ttgcggataa tcgcgcgcaa tgcgcgaaac
      241 cgtctgccgc cagagttgcg aagtctcgag cacgttcgcc ttatcaactg acgtcacttt
      301 ccgccggcgc ttcatcgctg cttcgaacgc gacgcgcgat acgcgttcga tttccgcaac
      361 cgaatagcgc atcgtgttga acgcgactga attgccgttc tgcgaagcaa tgccccgggg
      421 ctcgccaaaa tagagtccgc ccaagagttc gcggacgatc agaatatcaa ccgtctcagc
      481 gagttctctt cgcagtggag aggcatcagc cagcgcccga taagttgtta ccggccggag
      541 gttcgcaaag ccgccgagcg cctgccttaa ccggagcaga cccgcctcgg gtcgtttgtc
      601 gaatggcaga tggtcgaatg cgggggtgcc gactgcgccg agcaaaaccg cgtcggcgga
      661 caggcacgcg tccaacgtcg gacgcggcaa cggcgatcct gacgtctcaa ttgccgcgcc
      721 acccgcttga tgttcttcga gcagaaagtt gtggccgtga atgtttgcaa cctcgcgcaa
      781 aacacgcacg gcctgttccg tcacttccgg tccaaccccg tcacccggaa ggatgactat
      841 tttcaactgc atgcttcccc ttgaagtttt gctgaaacta cgccgtcgcc ctacgcgccc
      901 actgttcgcg ctcaggcgga atcatcgcta cggcgcgctt ggcctttgtg cctaccagcg
      961 aaatcaaatc ctgatcgtag atgcgcttct tacgatccgc cagctgcgtg aatcgatggt
     1021 acacagattt caactcagct gcgtcaagcg tgtaacccaa ctcctggtaa cgcaatgcca
     1081 aagcatgacg ccccgagtgt ttcccaagca ctagctcgtt cgcgggcacg cccaccgatt
     1141 ccggcgtcat gatctcgtaa cacagcggat tgctgatcac gccgtgctga tggatgcctg
     1201 cctcgtgagc aaaagcgttt cggccgacaa ttgctttgtt tggctggacg ccaaagccga
     1261 tgatttgcga tagcagttgg ctggttggat acagctcgcg cgtgtcaatg ccggtttcga
     1321 acggaagccg atcgccgcgc acgcgcattg ccatcgcgat ctcttccaaa gatgcgttcc
     1381 ccgcgcgctc gccaatgcca ttgatcgtgc attcgatctg ccgggcacct gcatcaaccg
     1441 ccgcgagact atttgcgacg gccaagccaa gatcgttgtg acaatgaacg ctgattgtta
     1501 tgtcgtcgcg ctcgccgatg actcgctcgc gtactgtcct aatcagttgc gtgaattcat
     1561 tgggcagagt gtaaccaacg gtgtccggta cgttcaggat cgtcgcgccc tcttcgatcg
     1621 cgacactaaa cacatcgcac agatagttta cgtcactgcg cgtggcgtct tccgctgaga
     1681 actcaacttc ttcagcgtag tctcgcgcca ggcgcaccgc ggcgcgcgtc atgtcgagaa
     1741 cttcggcgcg cgactttttt aatttgtact caagatgaat gtcggaagtg gcgacgaacg
     1801 tgtgcatgcg aggatgcgcc gcgcccctca atgcttccgc cgcgcggctc acgtcctgtt
     1861 cggaggttcg acagagcgca gccactctca cgctgcgaca ttgcgccgcg accgccttca
     1921 ccgcggcaaa atccccgtcc gaagcaattg gaaatccagc ttcgatgatg tccacgccaa
     1981 gctcttcaag cttccgggcc agttgcacct tctccggcaa attcatcgaa cagcccggcg
     2041 attgttcgcc gtcgcgcaac gtcgtgtcga agattctcac tcgttcagtc atgtgcggcc
     2101 tccgcgattt acccacaaaa aggcggccat cctaagccgc gaaccggtga aagtcaaagt
     2161 tataatattg atgaaatgat aatacgtcgt gatattatta ctcgcgcgcg cagtgtgaat
     2221 aacctgaaac cggaggcgat agcgtggata tcagccaatt acaagtgttt ttgagcgtgg
     2281 cccaggagaa gagtttctcg cgcgcggccg aggctttgca ccgcactcag ccggcagtga
     2341 gccagtcaat tcgccgtttg gaggcggaat tgggcgagcc gttgtttgat cgttcttcga
     2401 aagacggaac gctcacggcc gcgggtaagg tcctgttcga tttcgcgcag cagatgatga
     2461 acctgcgtca acatgcccac acggcgattc gtgagctgcg cgaccttcat cgggggaagc
     2521 taactcttag cgcaaacgag tacaccgtga tgggcttgct gcctttgatt ccgacctttc
     2581 gcgcacgcca tccgcacatc aaagtcgaag taaagcgaag tttcgccagc cggattcctt
     2641 cagagatttt gggacgcgat gtcgagattg gcgtcgtcac gttcaagccc agcgacgcct
     2701 cgataagttc ccttccagtc accactgacg aactcgcgct gatcgtcgct ccggatcatc
     2761 ctctggccgg cagggaaacg atttcggtgc gcgagctggg cgcggaaact ttcatcgccc
     2821 acaatgtgcc gtcgccttat cgcgaacggg tcgtgaagac ttttgaaaag taccgcacgc
     2881 cgctgaacat ctcgatggag atgccaacgc tggaagccat caagcgaatg gttgagaaca
     2941 gaatgggagt cgcgctggtg ccgcggctga cggcgcagac agaaatcgaa cgcggattac
     3001 tcgtgggact caccgtgaaa gaaatgcggc tcgaacgaaa gctgcacttg atttaccgga
     3061 aaggcgcgac cctgtcacac gcggcgaagg cttttttgag ggtggctcga gaaccggcga
     3121 cgaagactcc tcgaaccgcg gccgtttaga tgggttgctc atcacaacaa cctgcgcgcg
     3181 agtcgaaagg aagctgggcg caccaagacg cctttacatc actgcctgcg tttaaacacg
     3241 gatttcattt ttgcaatcag agacggaccc attgtcattt cgacggcacg cgtcagagtc
     3301 tgctgatcac tagagagcga ccactcttcg taagtcacca tttccacgac aagtgaacct
     3361 ctgcccgcag gcctactcac cgaacgtcgc acgagcttcg gaccgttcca ctttgtttca
     3421 ggtgacgggt cgtcgggtcg ttgatttggg ttagcttcgg ccttgccatc agtgtggtac
     3481 tcgagttctt cggtgatctg tttcttcccg cgtttgtatt gcttggtcat tctgatgtcg
     3541 ggttcacggt ggattattgt cagaacgtaa tcactgattc ctgaatcaac attgctttgg
     3601 gacctgtcga gaacccacgt tccggtaaag tcaggttttt gatgagatgt ttgcttttgg
     3661 ccgaaacaca gaccggccag gagtaccatc ggcagaacca aaacgaagtt cggcagtcgt
     3721 ttgttggtca tgggtcggca ggtgggcctt cttacaactg tttgacgtca atgatctcgg
     3781 cgccaaaggt acgttgcacc tgctggacgg ttggatctgc ggcagcggcg tgacgagctt
     3841 tctgtttggc ctcgcgagca tccggagtga cattggttga ggtggcagcg tcgtcttcag
     3901 atttgatgat gtaacggatg ccgacttcgc ggccggccga gtcggcgcac gcttcgcgca
     3961 aagctttcgc gttatcggcg cgcgctaaag tgttgcgata gtgtttgttt tcctgagtga
     4021 actcaaccag gaattcgtca ccttccagtt cagcgcgcac cgcgccgtcg agtgcggcca
     4081 cgagcaatgg ccggcgcttt tgcttgagct tcgccttcac gttgtcgcag aaggtgttcg
     4141 ttttcgccgc tgacggttca gccgatgccg tctcggccga tgcgacagat tcgaaaggta
     4201 cgttgctcgc ggttggcgac gggcgagtga tagttggcgt tgccgtctct gtgcgcagac
     4261 tcgctttttc tgccgggccc ttgcccgttc gcaaggctga ttcaagcgcg gcgatgcgtt
     4321 cgacgagatc accaagcggc gcgagccgtc gcatctccat cagtttcacc aggccgactt
     4381 cgacctgata acgcgggttc gccgcgtcct tcaaagtgct ttccgtttcc gcgagcgaat
     4441 ggaagaacct cacgagatct gattcggaaa actgttccgc ttgctgtttc agcgcggcgg
     4501 cgtgcgtcga agctgaatcg agaatctttg gatcggctga gactttcacc accagcagat
     4561 cgcgcaggtg ggccagcacc tcgcggcaga aattgcgcag gttgtgcccg cgcatcacga
     4621 tgtcgtccac aatcgccaac
//
LOCUS       DATDBY010000641         5706 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1075210, whole genome shotgun sequence.
ACCESSION   DATDBY010000641 DATDBY010000000
VERSION     DATDBY010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 5706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5706
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1075210"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..663
                     /locus_tag="VIT19_12050"
     CDS             <1..663
                     /locus_tag="VIT19_12050"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839761.1"
                     /translation="LRFDEKRRNEAIAALETAIKLDPKMLSAYDDLGGLFAYAKDEKR
                     AEEAFRKEMAADPQHMAGRFSLGRMMVKQGRLAEARELWEGRTSDEDRTMPRFIDMLT
                     RAENLMRATDALAKKPKDPDALIEMGFAVMEGDSWVVDRRQERAIGYFKQALELNPDS
                     ARAQYGIVKAYIQIADTFKAEKAQFDREMAKLRQLDPKLADELEEYRKNYVGGIRVKT
                     MN"
     gene            783..1265
                     /locus_tag="VIT19_12055"
     CDS             783..1265
                     /locus_tag="VIT19_12055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839762.1"
                     /translation="MITSIRRAGFVRVARSGVLIGVLFVAASAQPATNHSLPRVGTIK
                     DYPATGLMTGCGNVYVYKVADADSSTANYVFLSRGDGSHAWMNLNGRDVRLRKTKSGA
                     GAKRLRSDSYRYGSVHITVETKPFTPRAGRPEHMFKMKITLRRGGAVRVVHAIGDADC
                     "
     gene            1267..1785
                     /locus_tag="VIT19_12060"
     CDS             1267..1785
                     /locus_tag="VIT19_12060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839763.1"
                     /translation="MVKLIYRSVLIAGLVWFLPANSYAQFSDTPRRPQALRLANMQAM
                     LFFENTGKFSPDVFTNQVNLWNTTIEGASREGASESMLVVVEIRSEGDGWLPRNRKVQ
                     LTARYRIADRSGHGKPAFFSKTMTINIGSDYKFFAAFWLYETGCHPVELTARIVGQRG
                     SLRKKINFGCGE"
     gene            complement(2081..2641)
                     /locus_tag="VIT19_12065"
     CDS             complement(2081..2641)
                     /locus_tag="VIT19_12065"
                     /inference="COORDINATES: protein motif:HMM:NF016184.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase family protein"
                     /protein_id="HEY5839764.1"
                     /translation="MLTKIILTLSLTLLSAMPLAAQQEIPPIRNFVRVNKEFCTGGQP
                     RLEHLQQLKDEGVKSIINLRTATEHRAAEEESKAKELGLRYFNIPVVFGDPKDEQVAE
                     FLKITDDPANRPAFIHCTSAIRVGAFWMIRRVLRDGWTVEAAEEEAKKIGLKESPHLN
                     EFARRYIEKNTKAPLSDFRCILTAEP"
     gene            complement(2819..4369)
                     /locus_tag="VIT19_12070"
     CDS             complement(2819..4369)
                     /locus_tag="VIT19_12070"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY5839765.1"
                     /translation="MPTNKLLAGLIIAAVALPLVLTHSSAAKPSLLSSAPTDWSQFRG
                     PNGTGVAETTGLPIEFGPTKNVVWKTELPPGHSSPVLTRDRIFVTAYKKIPTATARRR
                     AHVFQASPIEKENYKLLVIALDRASGKIVWQREVPRASKGRLQNVNNPASPSPVTDGT
                     NVYIFFQEFGLISYDRAGKERWKLPLGPFSMFYGFGASPILADDKIILPVDQDNPISY
                     LIAVDKNSGKVSWKVDRPGVISGYSTPIVYQPKQGAKQIIVPESFQLSAYSIADGKRV
                     WWVKGLACEMKSIASHDSEYLYINGWGFPQNQQGQQIKTISFDEALPVYDKNGDRQIA
                     KTEISGTEKMDRMLSNAFEAFDMDRDEKLNARDWEVFRAMMASENGLLSIKMGGEGDQ
                     TATAVRWHYYKPVPQVPSTLLYKGVLYMINDSGILLTFDPANGNVIKQGRLMGAIDKY
                     FASPVAADDKVFVIGQGGQVSVLKAGGEWEVLKINEMDDEVYATPAIADGRIYIRTRS
                     ALYSFGKV"
     gene            4693..>5706
                     /locus_tag="VIT19_12075"
     CDS             4693..>5706
                     /locus_tag="VIT19_12075"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY5839766.1"
                     /translation="MTPERWRQVEDIFQTALDLPVERRATYLSDACGADSTLHEEVVS
                     LLASHETGDYSFEDLVPEEIKAKRFDPFGEDVDPLIGKRLGAYEIVREIGRGGMGAVY
                     EAVRVDKEFTRRVAIKLVKRGMDTDFILRRFRKERQILAALDHPNIGRLLDGGTTDDG
                     LPYFVMEFIEGGQPLYQYCDNRKLSISERLKLFSAVCDAVHYAHQKQVVHRDIKPSNV
                     LVTNDGVPKLLDFGIAKLLNPELAGDITHDPTATAMRLMTPEYASPEQVQGAPITPST
                     DVYSLGVLLYELLSGHRPYRLFNRAPHEIARVICEEPPAPLSIIITRPHDLLPSGNEA
                     TTLE"
BASE COUNT         1255 a         1578 c         1592 g         1281 t
ORIGIN      
        1 ctgaggttcg acgaaaaaag gcgaaacgaa gccatcgccg cgctcgaaac cgcaatcaag
       61 cttgatccga agatgttgag cgcttacgac gatttgggtg gcctcttcgc gtatgcgaag
      121 gacgagaagc gtgccgaaga ggcgtttcgg aaggaaatgg ccgccgatcc gcagcacatg
      181 gccggccggt tctctctcgg gcgcatgatg gttaaacaag gacgtctcgc ggaggcccga
      241 gagctttggg aaggtcgcac ttcagatgaa gatcgcacga tgccccggtt catcgatatg
      301 ctgacgcgag ccgagaacct gatgcgagcc accgacgccc tggcaaagaa gccgaaggat
      361 ccggacgcac ttatcgaaat gggattcgcc gtgatggagg gtgactcgtg ggtcgtcgac
      421 cgtcggcagg agcgggccat cggctatttc aagcaagccc tcgaattgaa ccccgatagt
      481 gcccgcgcgc agtatgggat cgtcaaggcg tacatccaga ttgcggatac cttcaaagcg
      541 gagaaggcgc aatttgatcg agagatggcc aaactcagac aactcgatcc gaagttggcg
      601 gacgagttag aagagtaccg aaaaaactat gtaggcggca ttagggtcaa gactatgaac
      661 taagtccagc cggttagatt gctcgggctt gaatcaagca cctccccgcg cctcacggcg
      721 ctccgcacgc tcacccgcgc cggttgcgca atttcttgta tcatcatgcg tcaatggggt
      781 tgatgattac gtcaatacgc cgagccggct ttgtgcgcgt cgcccgtagc ggagttctga
      841 tcggcgtcct cttcgtcgcc gcgtcggccc aacccgccac gaatcattct ctccctcgcg
      901 tcggcaccat caaggactat ccggcgacgg gattaatgac tgggtgcggc aatgtctatg
      961 tttacaaagt cgcggacgcg gattcgtcga ctgccaatta cgtgtttctc tcccgtggcg
     1021 atggcagcca tgcctggatg aatctcaacg gccgggatgt gaggttgcgg aaaactaaat
     1081 caggcgcggg cgcaaaacga ttgcggtccg actcttatcg ctacggcagt gttcacatca
     1141 cggtagagac caaacccttc accccgcgag ccggcagacc tgaacacatg ttcaaaatga
     1201 aaatcacttt gcggagaggc ggcgcggtcc gagtagttca cgccatcggc gacgcagact
     1261 gctgagatgg taaagctgat atatcgcagc gtgttgatag cgggcctcgt ctggttcctg
     1321 cccgccaaca gttacgctca gtttagcgat acgccgagac gtccccaggc gctgcggctc
     1381 gcaaacatgc aggcgatgct gtttttcgag aacaccggca agttctctcc cgatgtcttc
     1441 accaatcagg tgaacttgtg gaacacgacg atcgagggag cttcgcgcga aggcgcctcg
     1501 gaatccatgc tcgtggtcgt tgaaatccga tctgaaggcg atgggtggct tccgcggaac
     1561 cgtaaagtgc aattaacggc gcggtatcga atcgctgacc ggagcggcca tggcaagccg
     1621 gcgttcttca gcaagacgat gacgatcaac atcggctcgg attacaaatt cttcgccgcg
     1681 ttttggctct acgaaacagg ttgtcatccg gtcgaactta ctgcgcgcat cgttgggcag
     1741 cgtgggagtc tgcgaaagaa aataaacttc ggctgtggcg agtgaacagc ggcagacggc
     1801 cttgcctcaa aagttcgaaa aggcagttct cattcacacc gggctttagc ccggggataa
     1861 gcagaggagg acactagtga accgttgtaa cggtttactg ggcttcctca agacactcag
     1921 gcgattggct acgaaggact tgccttgcaa acgacacgga gaaaccgttg aaacggttcc
     1981 tatgattctc acggtctttc atcaccgggc tgaagcccgg tgtgaatgag actaagactc
     2041 tcagactttt gaggcaaagc ttacccccgg ctaccttctg tcacggctct gccgtgagaa
     2101 tgcatctgaa gtcacttaac ggcgctttgg tgtttttttc tatgtaccgg cgcgcaaact
     2161 cgttcaggtg aggactttct tttaggccaa tcttcttcgc ttcttcctcg gccgcttcaa
     2221 ccgtccaacc atcgcgcaac acccggcgga tcatccaaaa ggcaccgacg cgaatcgctg
     2281 atgtgcaatg aataaacgcc ggacgattcg ccgggtcgtc ggtgattttc aggaattcag
     2341 cgacttgttc atccttcgga tcgccaaaga cgacggggat gttgaaatat cgcaggccga
     2401 gttctttggc tttggattct tcttcggctg cccgatgctc ggttgcggta cgcaggttaa
     2461 ttatcgactt aacgccttcg tccttcagtt gctgcagatg ttccagtctc ggctggccgc
     2521 cggtgcagaa ctctttgttg actcgcacaa aattcctgat gggtggaatc tcctgctggg
     2581 ctgccaacgg catcgctgac agaagggtca gagaaagggt taggataatt ttcgtgagca
     2641 ttcttttatg cggcgaagtt aaaaaatgat tcgtgcagtt tcgttttgcc cctccccgta
     2701 aacggggagg ggttaggggt ggggttcgcg tcagttaacc tctcccccaa cccctctccg
     2761 cgcgcggaga ggggcaaacg aaccattccc gctactcttg tgcgaaccca gattcgctct
     2821 acaccttccc aaagctatac agcgcgcttc tggtgcggat gtaaatgcgg ccatctgcaa
     2881 tcgccggcgt cgcataaact tcgtcgtcca tctcgttaat cttcaagact tcccattcgc
     2941 cgccggcttt caaaaccgag acctgaccgc cctgaccgat gacgaaaact ttgtcgtcag
     3001 ccgcgaccgg ggacgcgaag tatttatcga ttgctcccat cagccggccc tgcttgatta
     3061 cgttgccgtt cgcgggatcg aaggtgagca ggatgccgct gtcgttaatc atatagagca
     3121 cgcccttgta gagcagcgtc gaaggaacct gcggcaccgg tttgtaatag tgccagcgga
     3181 cggccgttgc ggtttgatcc ccttcgccac ccatcttgat cgagagcagg ccattctcag
     3241 aagccatcat cgcgcgaaat acttcccaat cccgtgcatt cagcttctca tcacgatcca
     3301 tgtcgaacgc ctcgaaagca ttgctcaaca tccgatccat cttctcagtt cctgagattt
     3361 cagtcttggc gatttgacgg tctccgttct tatcgtagac cggcagagcc tcgtcgaaag
     3421 aaatagtttt gatctgctgg ccttgctggt tctgcggaaa gccccagccg ttgatgtaga
     3481 gatattcgga atcgtggctg gcgattgatt tcatctcgca cgccagacct ttaacccacc
     3541 agacgcgctt accgtcagcg attgagtacg cggacagttg aaatgattca gggacgatga
     3601 tctgcttagc cccctgtttt ggttggtaga cgattggcgt tgagtaaccc gagatcacac
     3661 caggccggtc aactttccaa ctcactttgc cactgttttt gtcgaccgcg attaggtatg
     3721 agatgggatt atcctgatcg accggcagga tgatcttgtc gtcagccagg attggcgaag
     3781 cgccgaaacc gtagaacatg ctgaagggcc caagcggcag cttccaacgc tctttccccg
     3841 cccggtcgta cgagatcaga ccgaactcct ggaagaagat atacacattg gtgccgtcgg
     3901 tgaccggact gggtgaagcc ggattattca cgttttgcaa acggccctta ctcgcccgcg
     3961 gcacttcgcg ttgccaaact attttcccgc tggcgcgatc gagtgcgatc accaaaagtt
     4021 tgtagttctc tttttcaatc ggactcgcct ggaagacatg agcacgcctt ctggcggtgg
     4081 ccgtagggat ttttttgtaa gccgtaacaa agatccggtc ccgcgtgagc acgggcgacg
     4141 aatgacccgg cggcagttca gtcttccaca cgacgttctt tgtcggtccg aactcgatgg
     4201 gcagcccggt agtttcagcg acaccggtac cattcggtcc gcgaaactga gaccagtcgg
     4261 taggcgcact tgaaaggagg ctgggctttg cggctgacga gtgggttaag acgagcggca
     4321 aggcaacagc ggctatgatt aagccagcga gtagtttgtt tgttggcatg gcagtgttta
     4381 ttgtcgagac gagcttgatg ccgtcgattc gggtccggaa aaatcaacca tgaagagacg
     4441 gccggattct aattcattca cagaagaaat cactagcggc gtggcaccgg ctttagtcgg
     4501 tgatttctgc tcgggaaagt cacagactga agtctgtgcc actaagtaaa tcacgcgttg
     4561 atattttttc tgcgctcgac taggatggcg aaacccagtt tgcgtcgaaa atttgatgtg
     4621 aggcgtgcat cctcgaatct aacgggttct cccaaacaat cgaagttcgt gaacgcttgc
     4681 cactggtgag ttatgacccc cgaacgctgg cgacaagtcg aagacatttt ccagaccgct
     4741 ctcgatctgc ccgtagaacg gcgcgccacg tatctgtctg acgcctgcgg cgccgactcc
     4801 accttgcacg aggaagttgt cagcctcctc gccagtcatg aaaccggcga ttactcgttc
     4861 gaagacctcg tgcccgagga aatcaaagca aagcgtttcg atcctttcgg ggaagatgtc
     4921 gatcctttaa tcgggaagcg gctcggcgcg tacgagattg tgcgcgagat cggccgcggc
     4981 ggcatgggtg cggtttacga ggccgtgcgc gtcgacaaag agttcacccg gcgcgtagcc
     5041 atcaagctgg tcaagcgcgg catggacacc gattttatcc tgcgccgctt tcgcaaagag
     5101 cgacagattc tcgccgcgct tgatcatccg aacattgggc ggctgcttga cggcggcacg
     5161 accgacgatg gactgcctta cttcgtcatg gagttcatcg aaggcggcca gcccctgtac
     5221 caatactgcg acaatcgcaa gctcagcatt agcgaacgcc tgaagctgtt tagcgcggtc
     5281 tgcgatgccg tccactacgc gcatcagaaa caggttgtcc atcgcgacat caaaccttcg
     5341 aatgtgctgg tgacaaacga cggcgtgccg aagctgctcg actttggcat tgcaaagctt
     5401 ttgaatccag agctcgccgg cgacatcacg cacgatccga ccgccacggc gatgcgcttg
     5461 atgacgcccg aatacgcttc gccggagcaa gttcaaggcg cgccgatcac gccttcgact
     5521 gacgtttatt cgctcggcgt tctgctttac gaattactga gtggccatcg gccctatcgt
     5581 ttgttcaatc gcgcgccaca tgaaattgcg cgggtgattt gtgaagagcc gccggcgcct
     5641 ttgagcatca tcatcacgcg cccgcacgat ctgctgccct caggaaacga ggccacgacg
     5701 cttgag
//
LOCUS       DATDBY010000642         7200 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1075972, whole genome shotgun sequence.
ACCESSION   DATDBY010000642 DATDBY010000000
VERSION     DATDBY010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 7200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7200
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1075972"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..691
                     /locus_tag="VIT19_12080"
     CDS             <1..691
                     /locus_tag="VIT19_12080"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5839767.1"
                     /translation="ENKLAKVLIIEDEPNMVLGLKDSCEYEGYEVAVARDGKEGLEKA
                     ATEKPDIILLDVMLPVMSGIDVCRTLRARGIETPILMLTARNQEIDKVVGLEVGADDY
                     VTKPFSIMELLARIRAHLRRAAKQVADIESFTFGEVELNFKKYTARKGGHALELSPRE
                     FEILRYLIRRRGEIVTRDQLLDEVWGYDNNPVTRTVDNHIARLRQKIEPEPSNPRHII
                     TVHRIGYRFIE"
     gene            872..1393
                     /locus_tag="VIT19_12085"
     CDS             872..1393
                     /locus_tag="VIT19_12085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839768.1"
                     /translation="MRKLTILIMLFAAVAVVRAQDTQPKAAGAQADAKKAFAILKTLT
                     GSWQGTIMDTPISFTIRAVSSGTAILHEGHTSKDGPPKNEITLFYRDGDRLLATHYCD
                     AGNRSNMEGKLSADGKSIEFSLLEVVGSTRGGYLKDLAITMIDADRHVIALNFVMPDG
                     KPIPLRAEFQRTK"
     gene            1451..2794
                     /locus_tag="VIT19_12090"
     CDS             1451..2794
                     /locus_tag="VIT19_12090"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HEY5839769.1"
                     /translation="MKLALAGCLSVAVTVLLSSIAFAQARIDQAFTVGENVLVSATAA
                     ERPLVEPQVVAHPKDPKHLLAVAISSSEPPHSPQADCAAFVSFDGGQSWAQHNFGISN
                     CGDPWVALREDGTALFAGLTTRGEIRLFRSGDSGRSWLPVPLDIGRGHDHQTLVVDPT
                     AGSRAGSFYLVSGRMQRDKSGRGAASVFVTRSGDGGKMFTPPTNFVPNSLNNNVLTPA
                     ILSDGTLIVPFIDYQDHPGDHGATATLERRRVWATLSSDGGQTFSYPMFASEACGSGG
                     GFASSAVDTSTGASRDRLYLICTNRERNTVFVHNSSDRGERWSAPVRADRASGEAIFR
                     RTPSIAVNKDGVVAVTWYERRKEGTRECQHVYFTASLDGGKTFLPQARVSSAPSCPDT
                     PRNGQVAQRWPAGGDYSGLTAAADGSFHVLWADSRDGIYRLWTVRVRVNAPVKPG"
     gene            2891..3421
                     /locus_tag="VIT19_12095"
     CDS             2891..3421
                     /locus_tag="VIT19_12095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839770.1"
                     /translation="MSKPISSSALVSLAYVTLRILIVVNWLMVPVILVLLFVVPNRQW
                     IMSSFDLSPSPDADRLVMGLRAIAVLGLATIPLNYVGLKKLLAIVETVRGSDPFVAAN
                     AARLQAIAWVLLALNLLSIVIGAIGNAVSSPAHPVDIDAGFSINGWLAVLLTFVLARV
                     FAKGSLMREDLLAARV"
     gene            3605..4159
                     /locus_tag="VIT19_12100"
     CDS             3605..4159
                     /locus_tag="VIT19_12100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839771.1"
                     /translation="MNNDQLRDEADVLMQKCILPELLADYASWFIGGSYNYELMCWRD
                     LDVYVLDPQHDLRKCFEIGYQMTHRLSATKSRFTNNVGADPNGLYWGIKLGDARQGAW
                     KLDLWFLDAAGYEKHSKYCDNLRLRLTAETRSAILEIKSAYWRRREYRDTITSHLIYR
                     AVLDHDVRTVHDFERWLDIIAKSE"
     gene            4246..4662
                     /locus_tag="VIT19_12105"
     CDS             4246..4662
                     /locus_tag="VIT19_12105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839772.1"
                     /translation="MKPSVMLTIASLLSILLFSLHLADDIVRGMESGGLQDLFGGSLI
                     MVVWLYGATVLAERRSGYVIMLIASLLSFGVPVLHMQGKGVGIASGIANSSGGFRFVW
                     MLIALGVLGLFSVILAARALWNPQWGESRSLKNPNR"
     gene            4955..6907
                     /locus_tag="VIT19_12110"
     CDS             4955..6907
                     /locus_tag="VIT19_12110"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY5839773.1"
                     /translation="MGEHNVEQELDERKLREFTQALLADLRALAFMLEDGRIESGVRR
                     IGAEQEMFLVDRSLRPAPLALEVLEQANDSRLTTEIARFNLEANLTPIALTGRCFHSL
                     HEELNDVLGKARVAASEFGADLVLSGILPTLRVSDLTLANLTPIPRYHELNRSVTGLR
                     REPFSIHIKGLDELQLTHDNMMMESCNTSFQVHFQVDPSEFVNSYNIAQAITAPVLSA
                     AVNSPLLFGHRLWQETRLALFQHSADARSRTQLARSHPTRVGFGEQWLKHSVIELLHD
                     QIARFRPIMITRPDEDPFQVLARGEIPLLSALRMYNGTVWPWNRACYGISNGIAHLRI
                     ENRALPAGPTVIDEIANTAFFVGLMLALPSEYGEISKRMEFDDAKSNFFAAARHGLNA
                     QFNWIDGKSYPASSLILDHLLPLAWQGLQSAGVETSDISRYLGVIDERVQSGRTGAQW
                     MLRSLSATEGAGLKDTRYRMLTSTILERQKEGKPVHTWPIIEATEDDDWRSSYQTVGQ
                     FMATDLFTVLPDDLVDLAASVMDWRHIRHVPVEDEQGHLVGLVTHRGLLRLLVRGGHS
                     QDANPLTVREIMVTNPVTVSSTTPTLEALELMRQNRVGCLPVVDDGQLVGILTSYDFL
                     AASARLFKEQLTIADLTTARSKAQTA"
     gene            complement(6945..>7200)
                     /locus_tag="VIT19_12115"
     CDS             complement(6945..>7200)
                     /locus_tag="VIT19_12115"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEY5839774.1"
                     /translation="DLGMSVSGFHSHFKSVTAMSPVQFQKQIRLQEARRMMLGEDLDV
                     ASASSRVGYEDPSYFSREYKKMFGAPPQRDIARLRSQLRA"
BASE COUNT         1587 a         1986 c         2040 g         1587 t
ORIGIN      
        1 ggagaataag ttggccaaag ttctgataat cgaagacgaa cccaacatgg tgctcggcct
       61 aaaagacagc tgtgagtatg aaggctacga ggttgctgtg gcccgcgacg ggaaagaagg
      121 gctagagaag gctgcgactg agaaacctga cattattctg ctcgacgtga tgctgccggt
      181 aatgagcggg atcgatgtgt gccgcacttt gcgcgctcgg ggaatcgaga ctcccattct
      241 tatgctgacg gcgcggaacc aggagattga caaggtggtg ggcctggaag ttggcgccga
      301 tgattacgtg acgaaaccgt ttagcattat ggaactgctc gcacgaatca gggcgcattt
      361 gcgaagagcc gcgaaacaag tcgccgatat cgaaagtttt accttcggcg aggtggagtt
      421 gaatttcaag aaatatacgg cgcgcaaagg cgggcatgca ttagaacttt cgcctcgcga
      481 atttgaaatc ctgcgctacc taatccgacg tcgaggtgag atcgtcaccc gcgaccaact
      541 tctcgatgag gtttggggat atgacaacaa tccggtaacg cgcaccgtgg acaaccatat
      601 cgccagactg cgtcagaaaa tcgaaccaga accctcgaat ccccggcaca tcattaccgt
      661 tcaccggatc ggctatcgct tcatcgaata aaacgaggca tccagagatt ggcctcgaaa
      721 gaggcacaag ctactgcgtc ctgccgtctg cctactgttt tcccttcctt tcggtacagc
      781 tttttacaat ctaattacag tctgtggaga cttggaagtt cagagtctat aggctcgtcc
      841 tgtggatttt cagctctaag aaggagaacc gatgagaaaa ctaacgattc taatcatgct
      901 gttcgccgcg gtggccgtag tccgtgccca ggatacccag ccgaaagccg ccggcgcgca
      961 ggcggacgcg aaaaaagctt tcgcgatact caagacccta acgggttcgt ggcaaggtac
     1021 gattatggac acaccgatca gctttacgat tcgcgccgta tccagtggca ccgccattct
     1081 gcatgagggg catacaagta aagatggccc ccccaaaaat gagatcactc tgttctaccg
     1141 ggacggggat cggttgctcg ccacccatta ttgtgacgcc ggaaatcgct cgaatatgga
     1201 aggcaagttg tcggcggatg gaaagtcgat cgagttcagt cttctcgaag tcgtcggatc
     1261 gacgcgggga gggtacttga aggatttggc aatcacaatg attgacgcgg accgtcatgt
     1321 catagcgctt aatttcgtta tgccggacgg gaagccgatc cccttgcgtg ctgaatttca
     1381 acgaacaaaa tgactgcgcc gaaatcaacg taacgatcgc ggcatcatga ctttaaagga
     1441 ggacagagag atgaagttgg cactcgccgg ttgcctcagt gtcgcagtaa cggttctcct
     1501 gtcgagcatc gctttcgccc aggcgagaat cgaccaggct tttaccgtgg gcgagaacgt
     1561 cctcgtcagc gcaactgccg cggagcggcc gctggttgag ccgcaggtcg tggcgcaccc
     1621 gaaagatccg aaacatctgc tggcggtcgc cataagcagt tccgaacctc ctcactcacc
     1681 ccaggctgac tgcgcagcct tcgtttcgtt cgacgggggg cagagttggg cgcagcataa
     1741 cttcggaatt tcgaactgcg gcgatccatg ggtggcgctg cgcgaggacg ggacggccct
     1801 ctttgccggg ctgacgacgc gcggggaaat tcggctattt cgttccggtg acagtgggcg
     1861 aagttggttg ccggtccccc tggacatcgg ccgcgggcac gatcaccaaa ctctggttgt
     1921 tgatcccacc gccggatcac gtgccggctc tttctacctc gtctcgggac ggatgcagcg
     1981 tgacaagagt gggcgcggtg ctgcctccgt tttcgtcacg cgttcgggcg acggcgggaa
     2041 gatgtttact ccgcccacga acttcgtccc gaacagtctc aacaacaatg tgctcacgcc
     2101 cgcaatactc tccgacggta cattgatcgt gccgttcatc gactaccagg atcacccggg
     2161 tgaccacggc gcgaccgcga cgctcgagag aagacgcgtc tgggcaaccc tctcatcaga
     2221 cggcggtcaa actttttcgt acccgatgtt tgcttcggag gcgtgcggca gcggaggcgg
     2281 tttcgcctca agcgcggtag atacatcaac gggcgcatcg cgcgaccgcc tttacctgat
     2341 ctgcacgaac cgcgagcgca acaccgtctt cgttcacaac tcttcagatc gcggcgagcg
     2401 ttggtccgcg ccggtccgtg cggaccgcgc atctggcgaa gctatcttcc gccggactcc
     2461 gtccatagcg gtgaacaaag acggagtggt tgccgtgacg tggtacgaga ggcgaaagga
     2521 ggggacgcgt gaatgccagc acgtttactt cactgcctca ctcgacggtg ggaagacttt
     2581 cctgcctcag gcgcgcgttt catcagcccc gtcctgcccc gacacgccgc gcaacggcca
     2641 ggttgcgcag cggtggcccg ccggcggcga ctacagcggt ctgactgcgg cagcagacgg
     2701 cagcttccac gtgctgtggg ccgacagtcg tgacggtatc taccgtctct ggacggttcg
     2761 cgtcagagtc aatgctccag tcaagccggg ttagcagtgt gagttagaca gtcataagcc
     2821 gtttgcagaa aaccaacgag gaaatcaagc ctcattcata taactttcga tggaaggaaa
     2881 ttagtgaatc atgtcaaagc caatctcatc atccgccctg gtgtcgctcg cttacgtcac
     2941 gcttcgaatc ctaatcgtcg tgaactggct gatggtcccc gtgatcctcg ttctgctgtt
     3001 cgtggtaccg aaccggcaat ggatcatgag cagtttcgac ctttctccgt cgcctgatgc
     3061 ggaccggttg gtcatgggcc tgcgcgcgat cgccgtgctc ggtctcgcca cgattccgct
     3121 gaactacgtc ggcttaaaaa agctgctcgc gatcgttgag acggttcgcg ggagcgaccc
     3181 attcgtcgcc gcgaacgcgg cccggttgca ggcgatcgcc tgggtgctgc tcgcgctaaa
     3241 ccttctcagt atcgtcatcg gcgccatcgg taatgccgtt tccagtccgg cgcatccggt
     3301 cgatatagac gccggctttt caatcaacgg ctggctggcc gtgctcctca ccttcgtgct
     3361 ggctcgcgtc ttcgcgaaag gctcgctcat gcgcgaagat cttctggctg ctcgagtcta
     3421 atgtgaatag aaggagcact gatcatgcgt aattgtggcc gttgatcata ggcgtaaatg
     3481 tagagcagtg gaaaaagcgt gctctcgaag ccctgtaatg cacttggtcc gagatcgttt
     3541 cataaatgat tccgagtgac gccggtttca cgcagcgaca atgttcaacg ttgccgactt
     3601 gaggatgaac aacgaccagc tacgagacga agcggatgtg cttatgcaga aatgcattct
     3661 gcctgagtta ctcgccgact atgcgagttg gttcatcggc ggcagctaca actacgaact
     3721 gatgtgctgg cgcgatttgg atgtgtacgt gctcgatccg caacacgacc taagaaagtg
     3781 tttcgagatc ggctaccaaa tgacgcacag gctgtctgct acgaagtcgc ggttcacgaa
     3841 caatgtcggg gctgacccta acggattgta ttggggcatt aaacttggcg atgcacgcca
     3901 gggcgcgtgg aaacttgatc tgtggtttct ggatgcggca ggttatgaga agcactcaaa
     3961 atactgtgac aaccttcgcc tgcggctgac ggcagagacg cggtccgcga tattggaaat
     4021 aaagtcagca tactggcgcc ggcgcgaata ccgcgacacg atcaccagcc acctaatcta
     4081 ccgggcagtt ctcgaccacg atgtgagaac ggttcacgac ttcgagagat ggttagacat
     4141 catcgccaaa tccgaataac aacacgcgcg gccgaaacgt cgccacgtgt ttgatcgtgg
     4201 gcgccctgag catttccttt agccgctcgc accaggagaa cgattatgaa acccagcgtt
     4261 atgttaacta ttgcgtcgct gctctcgatc cttttgtttt cgttacacct ggcggacgac
     4321 atcgtccgcg ggatggaatc gggagggctc caggacttgt ttggcgggag tctcatcatg
     4381 gttgtctggc tgtacggagc caccgtgctc gccgaacggc gatcagggta cgtcataatg
     4441 ctcatcgcct cgctcctctc gtttggcgtt cccgtccttc acatgcaggg aaagggtgtc
     4501 ggcatcgcca gcgggatcgc caattccagc ggaggcttcc gctttgtctg gatgctgatc
     4561 gcgctcgggg tcctcgggct cttctccgtc atcctcgcag cgcgcgcact gtggaacccg
     4621 caatggggcg agtcccggtc gctcaaaaac ccaaacaggt aaaggttgtc gcggaaaatc
     4681 gataacagtt cgcagaggaa ttctgccggg gacacttgtt caagtgaatg caggaacctc
     4741 aggctaatac agccgtaaat tgcagttcca ttttgcgctc ttaccaggtt cccagtgttg
     4801 ggtaatatct cgcactggca tcgctgattc cgagaaattt ccccagaaaa ccactgacaa
     4861 gagtcagcca ccggctgctt gtagcgctat gcacgggttc ttcgttcgcg ctcagcttgg
     4921 ccctgaactt gctctcgggt agcccacaac cgatatgggc gaacataacg tcgaacagga
     4981 attagacgag cgaaagctgc gcgagttcac gcaggctttg ctggccgacc tgcgcgcgct
     5041 ggctttcatg ttggaggatg ggcgaattga aagcggcgtg cgcaggattg gcgctgagca
     5101 ggaaatgttt ctcgttgatc gcagcctacg accggcgccg ttggctctcg aagttctgga
     5161 gcaagcaaac gattctcgac tgactactga gatcgcgaga ttcaatctgg aagccaacct
     5221 gacgccaatt gcattgaccg ggcgctgctt tcattcgctg catgaagagt tgaacgacgt
     5281 gcttggcaaa gcgcgcgtcg cagcttcgga gttcggggcc gacctggtcc tctcgggaat
     5341 tctcccgacg ctgagagtgt cggatctcac cctggcgaat ctgacgccga tcccacgcta
     5401 tcacgagcta aaccgttcag tgactggact aagaagggaa cctttttcga tccacatcaa
     5461 agggttggat gaacttcaac tcacgcatga caacatgatg atggagtcgt gtaataccag
     5521 ctttcaagtc cactttcagg tcgatccctc ggaattcgta aacagctaca acatcgccca
     5581 ggcgatcacc gctcctgtgt tatctgcggc cgtcaactca ccgctcttgt tcggccaccg
     5641 cttgtggcaa gagacacggc tggcactctt ccaacattca gccgacgcgc gttcgcggac
     5701 gcagctcgcg cgcagtcatc caacccgggt gggatttggc gagcaatggt taaagcattc
     5761 cgtgattgag ctgctgcacg atcaaattgc gcgctttcgt cccatcatga tcactcgtcc
     5821 ggatgaagat ccttttcagg tattggcgcg cggcgaaatc cctttactct cggcgctccg
     5881 aatgtataac ggaactgtct ggccctggaa tcgggcctgc tatggaatca gcaatgggat
     5941 cgcgcacttg agaattgaga accgcgcact tcccgccgga ccaaccgtca tagatgagat
     6001 tgccaacaca gctttcttcg tcggactcat gctggctttg ccgagtgaat acggtgaaat
     6061 ctcaaagcgg atggaattcg atgatgcgaa atcaaatttc ttcgccgctg cgcgacatgg
     6121 cttgaacgcc caattcaact ggatcgatgg aaagagctat ccggcctcct ctttgattct
     6181 ggatcatctg cttccgttgg catggcaggg tttgcaaagc gcaggcgttg agacatcgga
     6241 cataagccgg tacctgggtg tcatcgacga aagagtccaa agtggccgta ccggcgcgca
     6301 gtggatgctc cggtcgctct ctgccaccga aggcgccggg ttaaaagata cacgctatcg
     6361 catgcttact tcgacgattc ttgagcgaca aaaggagggc aaaccggtgc atacctggcc
     6421 gataattgaa gcaaccgaag atgatgattg gcgcagcagt tatcaaaccg tggggcagtt
     6481 catggcgact gatcttttca ccgtgcttcc tgatgatctg gtcgatctcg ctgcgagtgt
     6541 gatggactgg cgtcacatcc gtcatgttcc ggttgaagat gagcagggac acctggtggg
     6601 tttagtcact caccgaggct tgctgcggct gcttgttcga ggaggacact cgcaggacgc
     6661 taatccatta acggtacgcg agatcatggt gaccaatccg gttacggttt cgtcgaccac
     6721 gcccaccctg gaagcattgg aactaatgcg ccaaaacaga gttggctgct taccggtggt
     6781 ggatgatggt cagctcgtag gaattctcac gtcgtatgat tttcttgccg cgtcagctcg
     6841 tcttttcaag gagcaactaa ccattgcaga tttgacgacg gcccgcagca aggctcaaac
     6901 cgcttaaatc cgttatgccc caggagcagc gcgcaacaca gcgctcaagc tctaagctgg
     6961 ctgcgcagtc tggcgatgtc gcgttgcggc ggagcgccga acatcttctt atactcacgg
     7021 ctaaaatagg acggatcttc ataaccgacc cgggagcttg cgctggctac gtccagatct
     7081 tcgccaagca tcatgcggcg ggcttcctgg agccggatct gtttttgaaa ctgcaccgga
     7141 ctcatcgctg ttaccgactt aaagtgagaa tgaaaaccgg aaacactcat cccaagatcg
//
LOCUS       DATDBY010000643         2066 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1915583, whole genome shotgun sequence.
ACCESSION   DATDBY010000643 DATDBY010000000
VERSION     DATDBY010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1915583"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="VIT19_12120"
     CDS             <1..268
                     /locus_tag="VIT19_12120"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY5839775.1"
                     /translation="KFDDEINPGSEVYKRGYKAGTVAMANAGPNTNGSQFFIMHVDYP
                     LPPSYSIFGRVTEGQDVVNAIATTKTASGDRPVEEVRMEKVTIE"
     gene            complement(284..1087)
                     /gene="thiD"
                     /locus_tag="VIT19_12125"
     CDS             complement(284..1087)
                     /gene="thiD"
                     /locus_tag="VIT19_12125"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEY5839776.1"
                     /translation="MTNREQAKPVVLTIAGFDPSGGAGIIADIRTIESFGCTAVAAIT
                     SVTFQNAEKFFGAKHQSAESVREQVEAITSVTSIAAVKIGMLPTAEVVREVARLIREN
                     DLPAPVNDPVLESTSGGKLMEDDAFEVFVTELLPRARVVTPNIPEAEKLAGMNIRNED
                     EMRQATARIRELGVPALLIKGGHLKKRSVVSGQSSVGHNREAIDLLDNDGQVTVFRSE
                     WIEAPNVRGTGCMLSSAITASLAKGSDLKDAVTTAKQFVSDRIRNSISN"
     gene            complement(1084..1626)
                     /locus_tag="VIT19_12130"
     CDS             complement(1084..1626)
                     /locus_tag="VIT19_12130"
                     /inference="COORDINATES: protein motif:HMM:NF014622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEY5839777.1"
                     /translation="MSAAVAAGLELIQLREKRLTTRVLFELSERSAALALGSATRLLV
                     NDRADVAAAAGADGVHLTTQSIDAATIRRTFGEDFLIGVSTHSLAEAEVAKEVGADFV
                     VFGPVFATPSKENYGPPAGLAKLEGVAKQLAPFPVLALGGVDVTNARECLRAGARGIA
                     GISLFAEPNRISEVVRELRQ"
     gene            complement(1649..>2066)
                     /locus_tag="VIT19_12135"
     CDS             complement(1649..>2066)
                     /locus_tag="VIT19_12135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839778.1"
                     /translation="SSRLTVVFYIILCLEIGIVLTILPWVPHGWWGLSDWGNNYFLLL
                     AARKTGYGLQRFVSSGWVRGTVTGIGLLNIAMGLWELFHFRKTVHALDGGGSTVESSP
                     KPRSQAVAPNEIRPVQTDPLSDYPRRKHGSDDSPES"
BASE COUNT          447 a          618 c          556 g          445 t
ORIGIN      
        1 aaagttcgat gatgaaatca atccgggctc agaagtttac aagcgcggct acaaagccgg
       61 gacggtggcg atggctaacg ccggcccgaa caccaacggc tcgcagttct tcatcatgca
      121 cgttgattat ccgctgccgc ccagctattc gatctttggc cgcgtgacgg aaggtcagga
      181 tgtggtgaac gcgattgcga ctacgaagac cgcctcaggc gatcggccgg ttgaagaagt
      241 gcggatggag aaagtgacga tcgaataagt tacctgtcag ttgtcagttg ctaatcgaat
      301 ttcggattcg atcagacacg aactgtttgg cggttgtcac agcatctttc agatctgatc
      361 ccttcgccag ggatgcagta atcgctgacg acagcatgca accagttccg cgaacattcg
      421 gcgcttcgat ccactcgctt cggaaaactg tcacctgacc atcgttgtcg agcaaatcga
      481 tggcttcgcg gttgtgtccc actgacgact gaccactgac cactgacctc ttcttgaggt
      541 gcccaccttt gatcagtagc gccgggacgc cgagttcacg aatccgcgcc gtcgcttgcc
      601 gcatctcgtc ttcattgcga atgttcatgc ccgcaagttt ttcagcttcg ggaatatttg
      661 gggtgactac tctcgcccgt ggcaatagtt cagtcacgaa cacttcaaaa gcatcgtctt
      721 ccattaactt gccgccactc gtcgattcca acaccggatc gttcacgggc gcgggcagat
      781 cgttttcgcg aatgagccga gccacttcgc gcacgacttc ggccgtcgga agcatcccta
      841 ttttaacggc cgcgatgctc gtcacgctcg tgatcgcttc gacctgttcg cgcacagact
      901 cagcggattg atgtttcgca ccaaagaact tctcggcatt ttggaaagtt actgaggtga
      961 ttgcggcgac ggccgtgcag ccgaacgatt caatcgtgcg tatgtcggca atgattcccg
     1021 ctccgccgga cggatcgaac ccggcaatcg tcaggactac aggtttcgct tgttcacggt
     1081 tcgtcattgc cgcagttccc gaacgacctc actgattcgg ttaggttctg caaaaagact
     1141 aattccggca atgccgcgcg cgccggctcg caaacactcg cgcgcattcg tgacatcaac
     1201 tccaccgagc gccagtacag gaaatggcgc cagctgcttc gctacgcctt ccaacttcgc
     1261 cagtccggcc ggcgggccgt agttttcttt cgacggtgtc gcgaacaccg gaccgaagac
     1321 gacaaagtct gcgccaactt ctttcgcaac ctcagcctcg gccagcgagt gcgttgacac
     1381 accgatcagg aagtcctccc cgaaagtgcg tcggattgtc gcagcgtcga ttgactgtgt
     1441 cgtcaaatga acgccatcag cgccggccgc agcggcgacg tcagcgcgat cattcaccaa
     1501 cagacgcgtt gccgaaccga gcgccagcgc tgcgctccgc tcactcagct caaacagaac
     1561 acgcgtcgtc agacgctttt ctctcagttg aattagttcg agtccggccg caaccgcagc
     1621 ggacacttgg gcaaggatgt gcctgaactc aggactctgg ggagtcgtcg cttccgtgct
     1681 tgcgccgcgg gtaatcagat agcggatcgg tttggacagg tcgaatttca ttcggtgcaa
     1741 cggcttgtga ccgcggtttg ggcgagcttt ccacagttga gccgccgccg tccagcgcgt
     1801 gtacggtctt gcgaaaatga aacagctccc aaagtcccat cgcgatattc aaaaggccga
     1861 tgcccgtgac ggttccgcgc acccaccctg aagacacgaa acgttgcagg ccgtaaccgg
     1921 tcttccgcgc agccagcagc agaaaatagt tgttgcccca gtcgctcaga ccccaccagc
     1981 cgtgcggcac ccagggcaga atggtgagca caatgccaat ctcaaggcat aggattatgt
     2041 agaaaactac cgtgagtctt gatgac
//
LOCUS       DATDBY010000644         3758 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2679634, whole genome shotgun sequence.
ACCESSION   DATDBY010000644 DATDBY010000000
VERSION     DATDBY010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3758
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2679634"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="VIT19_12140"
     CDS             complement(<1..655)
                     /locus_tag="VIT19_12140"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5839779.1"
                     /translation="MKLKIPKIFPTEILRMALDSVRSNKFRSFLTVLGIVIGVFTAIV
                     VASILTGMRQSLVAMIEDYGTNNIYAFHLTTGPRTNTDRAERLRKPLTIDDAETIKAQ
                     AGAVEDIAVEAPNVGYSGGPFDDNITYRGNNYRWGNTTGVTANYADLTNVTIREGRFI
                     TDADDDQRRNVLVIGVNAADALFPGEQSNIAGKEVRMGGLNFEIVGVLEKRKAGFFGE
                     "
     gene            complement(744..1988)
                     /locus_tag="VIT19_12145"
     CDS             complement(744..1988)
                     /locus_tag="VIT19_12145"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5839780.1"
                     /translation="MRYLYSVYSDSAKIALQSILAHKLRAFLTLIGIIIGVAAVVVVG
                     ASISGLNTYVTERVSKILGANHFMIARMASHGRMSDEEYERRNRRNKRLNWDDYEWVR
                     DRCQACSEVGVNMGAQADLSQDGVEFPGAVIFGVTANMETIEQKTIREGRFISNDDVT
                     RSALVCVLGHEIREKYFGSTDPIGKTLKVRGLPMRVVGVEETRGSFFGDSMDRHIYIP
                     ATTHMQMFGRNNLQIHGGSSSRETFPAAIENARMELRNKHRLKGNEEDDFGVVDVEGL
                     TNQIDQFTASIAAVVIPITAITLIVGGIVVMNIMLVSVTERTFEIGLRKAVGATRKQI
                     LVQFQIESAMLCGMGGVLGLLVAYGIVTVITALAGITMTITIGYILLAVIVSTGVGMI
                     AGIYPAFKAARLNPIIALTKTT"
     gene            complement(2258..>3758)
                     /locus_tag="VIT19_12150"
     CDS             complement(2258..>3758)
                     /locus_tag="VIT19_12150"
                     /inference="COORDINATES: protein motif:HMM:NF015995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease/substrate-binding
                     protein"
                     /protein_id="HEY5839781.1"
                     /translation="IAQHVWLVFISIAIAVAIGLPLGILITRRKRLRAPVLGIANVMQ
                     TIPSLALFGFLIPLPFIGGIGPRTAIVALVFYALLPIIRNTVTGIVGVDEAVREAAVA
                     MGMTDRQVLFQVELPLALSVILTGVRVAVVITIGVAIIAAAVGAGGLGEYIFRGLRVN
                     DDRLLLAGAVPSALMALAADFGFTLIERRFDPNSSRQRRLPKPLRVAALTVLAVGVLW
                     MGYAAVKSFRGGRADVIVGSKDFTESNLLAEMVAQMLEAHNFTVDRRFDFGGNLVHTA
                     LTAGQIDLYPEYTGTAFTAILHHKPITDPKAVYDQVKREYAEQFKVEVGPPLGYENTF
                     AILVRGEDARRLKLKTVSDAAKYSPQWQAGFGHDFISRQDGYPGFSDTYGLKFRGISE
                     MALDLTYTALSSHQVDMIAGNSTDGRIASLDLVQLEDDRRYFPPYEAVFITRRDSLAR
                     VRPLAEILQKLGGAISTDEMRKLNYEVDGARRDKKVVVREWLMRKGFIH"
BASE COUNT          833 a         1110 c         1009 g          806 t
ORIGIN      
        1 tctctccgaa aaaccccgct ttgcgcttct ccaggacgcc gacaatctca aagtttaagc
       61 cacccatccg aacttccttg ccggcgatat tgctctgctc acccggaaac agtgcatccg
      121 cggcgttgac gccgatcacc aggacattcc ggcgctgatc atcgtcagca tcggttatga
      181 agcgtccttc gcgaatcgtc acattcgtga gatccgcata attggctgtc acgccagtag
      241 tgtttcccca gcgatagttg tttccgcgat aagtgatatt gtcatcgaac ggcccgccgc
      301 tgtaaccaac gttgggcgcc tcaaccgcaa tgtcttcaac cgcacctgcc tgggccttga
      361 tcgtttcggc atcgtcgatg gtcaaaggct tacgcaggcg ctccgcgcga tcggtgtttg
      421 tgcgcgggcc ggtagtgagg tgaaaagcat agatattgtt ggtgccgtaa tcttcaatca
      481 tggcgaccag actctgccgc atgccggtca ggatcgaagc cacaacgatg gcggtgaaca
      541 cgccaataac gatgccgagc acggtcagaa agctgcgaaa cttgttcgag cggacgctgt
      601 ccagcgccat gcgcagaatc tctgtcggaa aaatcttggg aatcttaagt ttcacgtact
      661 tcctaagtag ccatttttag tgcttcgtac tttgtccttg gtactttgaa aagacatcaa
      721 agcacgaagt acaaagcacc gccttacgtt gtcttagtca aagcaataat cggattcagc
      781 cgggccgcct tgaaggccgg gtaaatgccg gcaatcatgc caacgccggt tgaaacaatt
      841 accgctaaaa gaatgtagcc aatggtaatc gtcatcgtga tccccgccag cgccgttatc
      901 acggtgacaa tcccgtacgc caccagcagc cccaacacac cgcccatccc gcagagcatt
      961 gcggactcga tctgaaactg caccaggatt tgtttgcgcg tcgcgccgac agctttgcgc
     1021 aagccgatct caaacgttcg ttccgtcacg ctgaccagca tgatgttcat cacgacgatg
     1081 ccgcccacga tcagagtgat ggccgtgatc ggaatcacca ctgcggcgat gctggcggtg
     1141 aattgatcga tttgattggt gagcccttcg acgtccacca cgccaaagtc atcttcctcg
     1201 ttccccttca accggtgttt gtttcgcagc tccatgcgcg cgttttcgat ggccgcaggg
     1261 aaggtttcgc gcgagctcga gccgccgtgg atttgcaggt tgtttcgccc aaacatctgc
     1321 atgtgggtcg ttgcgggaat atagatgtgc cggtccatcg aatcgccaaa gaacgagccg
     1381 cgcgtttctt cgacgccgac cacgcgcatc ggcaatccgc gaaccttcag cgtcttgcca
     1441 atcgggtccg tgctcccgaa atacttttct ctaatttcgt ggccgagtac gcataccagt
     1501 gccgaacgcg tcacgtcgtc gttcgaaatg aatcgccctt cgcgaatggt cttctgttcg
     1561 atcgtctcca tgttcgcggt gacgccaaag ataaccgcgc cgggaaactc gactccgtcc
     1621 tgactcagat ccgcctgcgc gcccatgttg acgccgactt ccgagcaggc ctggcagcgg
     1681 tcgcgcaccc actcgtagtc gtcccagttc agccgtttat tgcgacgatt ccggcgctcg
     1741 tactcttcat cgctcatccg cccgtgcgag gccatgcgcg caatcatgaa gtggtttgcg
     1801 cccagaatct tcgagacgcg ctcggtcacg taggtgttca ggccgctaat cgaggcgccg
     1861 acaaccacga cggcggcgac gccgatgatg atgccgataa gggtcaaaaa cgcgcggagt
     1921 ttgtgcgcca ggatggactg gagcgcgatc ttggcggaat cagaataaac ggaatagagg
     1981 tatcgcatcg gtaaatacgg cctgatttca gtacgagggc tacgcgcgaa aagtttagac
     2041 aaggaacatc aagctggagt tccatcttaa agacgccaga ttgaggcagt tattaacgga
     2101 gaaatttgga gtgcggcgga gcagaacaga gtggcgacgc cgctttggat ttgttccctc
     2161 tgcctttggg agagggttag ggcctttcgt ttagaggcgg gcgttgccct cctttgcggg
     2221 caggatgccc gcgctcccag catggcgcac tccaacatta atgaatgaag ccttttctca
     2281 tcaaccattc gcgcacgaca accttcttgt cccgccgcgc gccatcgacc tcatagttga
     2341 gcttccgcat ttcgtcagtt gaaatagcgc cgcctagctt ttgcaggatt tcggccagcg
     2401 gccggacccg cgccagggag tctctgcgag ttatgaacac cgcttcgtac ggtggaaagt
     2461 agcggcggtc gtcttcgagt tgaaccaagt cgagtgatgc gatgcgcccg tcggtcgagt
     2521 taccggcaat catgtcgact tggtgggatg acaacgcggt gtaggtcaag tccagcgcca
     2581 tctcgctgat cccacgaaat ttcaacccgt acgtgtccga aaacccagga taaccatcct
     2641 gtcgactgat gaagtcatgt ccgaagccgg cttgccattg cggcgaatat tttgccgcat
     2701 cagacacggt tttcagcttc agtcttcgcg cgtcttcacc gcgcacaaga atcgcaaacg
     2761 tgttttcgta gccaagcggt ggaccgacct caaccttgaa ttgttcggcg tactcgcgtt
     2821 tgacctgatc ataaacggcc ttcggatcgg tgatcggttt atggtgcagg atcgctgtga
     2881 aggccgtgcc ggtgtattca ggatagagat cgatttgtcc ggccgttagc gccgtgtgca
     2941 ccaggttccc tccaaaatcg aaacgtcgat cgactgtaaa gttgtgcgct tccaacatct
     3001 gcgcaaccat ttccgccaac aggttcgatt cagtgaagtc tttcgagccg acaatgacat
     3061 cagcacgacc tccgcgaaaa ctcttcacgg ccgcgtaacc catccacagc acgcccacgg
     3121 cgaggacagt caaagccgcc actcgcagtg gtttcggaag tcgccgctga cgcgaggagt
     3181 tgggatcaaa tcgtctttcg atcaacgtaa agccgaagtc tgccgccaaa gccatcagcg
     3241 ccgatggtac ggctccggcc aatagcaaac gatcatcgtt cactcgcagt ccgcgaaaga
     3301 tgtattcacc cagtccgccc gcgccaaccg cggcggcgat aatcgcgacg ccgatcgtga
     3361 tcaccactgc gacgcgcaca ccggtgagaa tgacactcaa cgcaagcggt aactcgactt
     3421 gaaacagcac ctgccgatca gtcatgccca tcgcgacggc cgcttcgcga acggcttcgt
     3481 cgacaccgac gattccagtc actgtgttac ggatgattgg cagcagcgcg taaaacacga
     3541 gcgcgacgat cgccgtgcgc ggaccgatcc cgccaatgaa gggaagtgga atcagaaatc
     3601 cgaacaacgc cagacttgga atcgtctgca ttacattcgc gatgcccagg accggcgcgc
     3661 gcagacgctt gcgccgcgta atcaggatgc cgagcggcaa tccgatcgcc accgcaatcg
     3721 caatcgagat gaaaaccagc cagacgtgct gcgcgatg
//
LOCUS       DATDBY010000645         3215 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_484028, whole genome shotgun sequence.
ACCESSION   DATDBY010000645 DATDBY010000000
VERSION     DATDBY010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3215
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_484028"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1154)
                     /locus_tag="VIT19_12155"
     CDS             complement(<1..1154)
                     /locus_tag="VIT19_12155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839782.1"
                     /translation="MKFCNTCQEEFADRFSFCPVDGTPLTAAPVAAASQSVPAEAIPP
                     VETVVPPVETATAAPAAFAVPATVSAAPAAVATGNIGEFHLTILEDSGLLSRLAGELG
                     NVAHNYQLTWPEFKRDPFGFVKRSFQGYGKMAGKFFSSRDVVIASVLSVVSLVVLVGA
                     IFVLDRTQGDGGPSRRTIAIVSILGFCGLLAIFASWLGKDRGAAVMGARPSDSRNVLS
                     GIVAAFAVLLMLVGGIVFLDRRHQAAAAAAEQDQIELTQMITDIPAEQPTPDEGTAGM
                     AKGSGGGSKAEKIKAGGGGGGGREQQDPASMGKLPQASLTVPQVVAPNPNPPPIKNPS
                     LPMPATLDADPVLFPPDTRNLAYGDPKSKSTTLSSGPGTGNGIGTGTGGGV"
     gene            complement(1378..1953)
                     /locus_tag="VIT19_12160"
     CDS             complement(1378..1953)
                     /locus_tag="VIT19_12160"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5839783.1"
                     /translation="MTDEGLLASAAGGDTTAFQILYERYRDPIFRFAYRLLGSAEAAE
                     DVTHDCFLSLIKEPSRFDSNRASLRTYIYATARNLAAKRYHSFGRETAIDELADEPAM
                     AERHAPVARLLDQELASEVQQAIASLPPLQREALVLFEYDELSLAEIGEVVGADANAV
                     KQRLFRAREKLRVRLERYFRIGREAATLRRA"
     gene            2358..>3215
                     /locus_tag="VIT19_12165"
     CDS             2358..>3215
                     /locus_tag="VIT19_12165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839784.1"
                     /translation="MTRKTLKSSLLSRSMLLLLVLAGICPTTARAQTAPEPEREMLLN
                     GLRILYWPQPGNPNVLLKLRIHSGAAFDLTDRAGMMALLGDALFPDPATREYMTEELQ
                     GRLEVTTTHDAIDITLVGKSSGLERMIDFLRGSVLTTQLGVESVATLRTARVKSLSEK
                     PATLADTADQAIAARVLGNFPYARPATGTAASVAKVERADLMLARERFLNADNASLAV
                     VGGVEKPRMMRALRQLLGLWGKSDRTIPSTFRQPGAPDTRVLVVDSPGATNAEIRLAI
                     RGLARGDREA"
BASE COUNT          678 a          994 c          918 g          625 t
ORIGIN      
        1 acaccgccac cggtgccggt gccaattcca ttgcccgttc ccggacctga cgaaagcgta
       61 gtcgatttcg acttcggatc gccgtacgcc agattacgcg tgtcgggtgg gaataggacc
      121 ggatcggcat cgagcgtcgc cggcatcggc aaagatggat tcttaatcgg tggaggattc
      181 ggattcggag ccaccacctg cgggaccgtc aaagatgctt gcggcagttt tcccatagac
      241 gcagggtctt gctgttcgcg gccaccgccg ccgccgccgc cagccttaat cttctccgcc
      301 ttgctaccgc cgccgcttcc cttcgccatg ccggcggttc cttcgtcggg cgtgggctgt
      361 tcggccggga tatcggtaat catctgcgtc agctcaatct gatcttgttc ggctgcggcg
      421 gccgcggcct gatgacgccg gtcgaggaaa acaatgccgc caacgagcat caacaacacc
      481 gcgaaggccg cgacgatacc cgaaaggacg ttgcgcgaat cagacggcct ggcgcccatc
      541 acagcagcgc cgcgatcctt gccgagccat gacgcaaaaa tcgccagcag cccgcaaaac
      601 ccgaggatcg aaacgatcgc gattgtgcga cgcgaggggc cgccgtcgcc ctgagtcctg
      661 tcgaggacga aaatcgcacc aaccagcacc accagcgaaa caacggacag caccgaagcg
      721 ataaccacgt cgcggctgga gaagaacttg ccggccatct tgccgtagcc ctggaacgaa
      781 cgcttcacga aaccaaacgg atcacgcttg aactctggcc aggtcaactg atagttgtgc
      841 gccacgttcc ctaactcgcc cgcaagtcgc gatagcaatc cgctgtcttc caggatcgtg
      901 aggtgaaatt cgccgatgtt gccggtggca actgctgcgg gcgcggccga taccgtcgcc
      961 ggaactgcga aagccgccgg tgctgccgta gccgtctcaa cggggggaac taccgtctca
     1021 accgggggaa tcgcttcggc cggaacagac tgactggccg cggcgacggg cgctgcggtt
     1081 aaaggcgtgc cgtcaaccgg acaaaagcta aacctgtcag cgaattcttc ctggcaagtg
     1141 ttacaaaatt tcatgtttac tacctcgcta tcccgctggg aataaagtgc tgaaacggac
     1201 ttcgtttggc tggtactttg ttgataagta gccgccacac ggttgtccaa cgacgcggga
     1261 gtttcgggga ctctccactg ccgaagtaaa tccttcaggt cttcgtcctg catgaactta
     1321 ccgtcaaaat cattcatcat aaaactccgt cgctcatgca ggcgcgtctg gtaaagctta
     1381 cgcccgcctc aatgtagcag cttcgcgacc gattcggaaa tatctctcaa gcctgacccg
     1441 aagcttctca cgcgcccgaa aaagtctctg cttgacggcg ttagcgtccg ccccgaccac
     1501 ctcgccaatc tcagccagcg acaactcgtc gtactcaaaa agaaccaaag cctctcgctg
     1561 aagcggcggc agactggcaa tcgcctgctg cacctctgaa gccaactctt gatcaagcag
     1621 ccgcgcgact ggtgcatgcc gctcggccat ggccggttcg tcggccaatt cgtcgatcgc
     1681 cgtctcgcgt ccgaagctgt ggtaacgctt ggcggccagg ttccgcgccg tcgcatagat
     1741 gtacgtgcgc agcgacgcgc ggttcgagtc aaaccggctg ggctctttta tcaaactcag
     1801 aaagcagtcg tgcgtgacgt cctcagcggc ttcggccgat cccaataacc gatacgcaaa
     1861 gcggaagatc gggtcgcgat accgttcgta caggatctga aatgcggtcg tgtcgccgcc
     1921 agctgcgctc gccagcagcc cttcatctgt cacctgattc gccaaacaag ctcgatcctg
     1981 caggaattgc ttcctacttg ttattactgc caatagcccg gaagttacga aaatttcttt
     2041 gaggccggcc cgaaaaaatg ctcggggcgt cagaattata tcccgctcag agcgcttcag
     2101 cacatcgaaa gcgcgcccaa ggcctttcgg cacagggctt tgatgcgttt ttgcaaccac
     2161 aggttgacgc tcttttaggc gacatctaaa ctctttggca tcgcatccca gattggctgt
     2221 gggagcgcgg gcaagcgggg tccccggccg ggcagcccgg ctggggtgct cgtcctgccc
     2281 gcattccgga ttgacaagaa gtgccgacaa atcaaaagct tgagcccgca aagcaccaac
     2341 tccgcatctg caaacgaatg acccgcaaaa cactgaaatc gtcgctgctt agccgcagca
     2401 tgctgcttct gctcgtactc gctggaattt gcccgacgac cgccagagcg cagactgcgc
     2461 ctgagccgga acgcgaaatg ctccttaacg gcctgcgaat tttgtattgg ccgcagccgg
     2521 gcaatccgaa tgttttgctg aagctgagga ttcattctgg cgcagcgttc gatttgaccg
     2581 acagggcggg aatgatggcg ctgctgggcg acgctctgtt tcccgaccca gccacgcgcg
     2641 agtacatgac ggaagaactc cagggacgac tggaagtcac gacaacgcac gatgcgattg
     2701 acataaccct cgtcggcaaa tcgagcggtc tggaacggat gatcgacttc ttgcgcggct
     2761 ctgttctgac cacgcagtta ggcgttgaga gtgtcgcgac cctgcgcacc gcccgtgtca
     2821 aatcgctatc tgaaaaaccg gcaacgttag ccgacactgc cgaccaggcg atcgccgcgc
     2881 gggtgctcgg aaatttcccg tacgcgcgcc ccgcgaccgg aaccgcggca agtgtcgcga
     2941 aagttgaacg cgccgatttg atgctggcgc gagaacgttt tttgaacgcg gacaatgcat
     3001 cgctcgcggt tgtcggtggc gttgagaagc cgaggatgat gcgcgcgctg cgacaattgc
     3061 tcggactctg gggtaaatcg gatcggacaa ttccctcaac gtttcgtcag ccgggcgccc
     3121 ccgacacgcg cgtgcttgtt gtcgatagcc ccggtgcaac gaacgcggaa attcggctcg
     3181 cgattcgcgg cctggcgcgc ggtgaccggg aggct
//
LOCUS       DATDBY010000646         2236 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2929653, whole genome shotgun sequence.
ACCESSION   DATDBY010000646 DATDBY010000000
VERSION     DATDBY010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2929653"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="VIT19_12170"
     CDS             <1..631
                     /locus_tag="VIT19_12170"
                     /inference="COORDINATES: protein motif:HMM:NF025141.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5839785.1"
                     /translation="SAKLAAEGMKPGDEAFVARFVGAEQFQIKEPMTSDLDSVADALD
                     DIYVEGGQTAVHDALDKALTYLEEDRSGDAKTRRSVLVLVTDGEDRASKIKDAKTILA
                     RARQSDVQIFVLGLTKFSGLQSSGSKATSLLSGLSEQSGGRAFFPESASGLPEAAREL
                     ARELHTQFTVGYVADDKAAGLERRVQVKWVGQADAGKRRIIVRPVVTTK"
     gene            655..1614
                     /locus_tag="VIT19_12175"
     CDS             655..1614
                     /locus_tag="VIT19_12175"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5839786.1"
                     /translation="MKKSAASILFALALFLSAIPPSNQAQTENQSTVVKLNLIVVDRN
                     NHAVDDVQKEDLQLFDNGTAQTILSFSREEVAAKYGIVIDTSGSLRTLFPVVKAGVMT
                     LIQANRPDDTTFITRFISSDQIHTVQPLTNDKAALTMAINGLAVRGGQTAVIDGLYLA
                     AEYAAKHRVARERLMLVLISDGEDRASYFNESQLLKLLRERDIQIFALGLIGDLEGEQ
                     GLIRKSPKRMASEFLTRLAKETGGRAFLLEKPKDLPGAIDEIAHDIHSQYVIEYQPTE
                     RLKPERKIEIKLTGAKEREKRKVITRAVIGAKPVTVKTESKQP"
     gene            1611..>2236
                     /locus_tag="VIT19_12180"
     CDS             1611..>2236
                     /locus_tag="VIT19_12180"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY5839787.1"
                     /translation="MNHSPLEEVGRTRRSFLSLAGKGVGLAALSSVTVANLLKNVTAA
                     TTSVAHLTPQQAAMDEDYWSTIQNSFSVTRGIINLNNGGVSPSPRIVTEALVRYIWQQ
                     EDATAYTMWQILEPQSETIRTGLAELFGCDREEIAITRNASESLETLLLGLDLKSGDE
                     VLTTTQDYPRMLTTIRQRERREGIRLSVIKIPIPPKNIEEITAAFERA"
BASE COUNT          552 a          586 c          652 g          446 t
ORIGIN      
        1 ctcggcgaag ctcgcggcgg aaggtatgaa gccgggtgac gaggccttcg tggcgcgctt
       61 tgtcggggcc gagcagtttc agatcaaaga gccgatgacg tcggatctcg actcggtcgc
      121 cgatgcgctc gacgatatct atgtcgaagg tggacagacc gccgttcacg atgccctcga
      181 caaggcgcta acgtacctgg aagaagatcg ttcgggcgat gcgaagacgc gtcgcagcgt
      241 gctggtactg gtgacggacg gcgaagatcg cgccagcaag attaaagacg cgaagacgat
      301 tcttgcgcgt gcgcgtcaaa gcgatgtgca gattttcgtg ctcggattga cgaagttttc
      361 cggcttgcag tcgtctggct cgaaggcgac gtcgcttctc agcggattgt cggaacagag
      421 tggcgggcgc gcgttttttc ccgagtcagc ttctggcctg cccgaggcag ctcgcgagct
      481 agcgcgtgag ctgcacaccc agttcacggt tggctatgtc gccgatgata aagcagcggg
      541 gcttgaacga agagttcagg taaagtgggt gggacaagcg gacgccggga aacgcagaat
      601 cattgtccgc cccgtcgtga caacaaaata gttgcgcaag cgccaatgtg attcatgaag
      661 aaatcggctg cctcaatttt atttgccctc gcattattcc tttcagcgat cccgccatcg
      721 aaccaggcac aaacggaaaa ccaatcgact gtcgttaagc tcaacctgat agttgtcgat
      781 cgcaacaatc atgcggttga cgacgttcag aaggaagact tgcagctatt cgataacgga
      841 actgctcaaa cgattttgtc tttttcgaga gaagaagtcg cagctaagta tggaatcgtg
      901 atcgacacct cgggatcgct ccgcacgtta ttcccggttg tgaaggcagg tgtgatgacg
      961 ctcatccagg ccaaccggcc ggatgacact acattcatca ccagatttat cagcagcgat
     1021 cagatacata ccgttcaacc tttgaccaac gacaaggcgg cgctgacgat ggcgattaat
     1081 ggtctagcgg tcaggggagg gcagacggct gtgattgatg gcctttacct tgcagccgag
     1141 tacgcagcga agcatcgcgt cgcgcgtgag cgcctgatgc tggtcttgat ttctgacggt
     1201 gaggatcgag ccagctattt taacgagtca caactcctga aactcttgcg cgagcgtgac
     1261 attcaaatct tcgcgctcgg cttaataggt gacctggagg gcgagcaggg actaatacgc
     1321 aaaagtccaa aaagaatggc gagtgaattt ctgacccggc tagccaaaga aaccggcggg
     1381 cgggcgtttc ttctggaaaa accgaaagac ttaccagggg cgatcgacga gattgcccac
     1441 gacatccata gccaatacgt aatcgaatat cagccgacag aaagacttaa gccggaacgc
     1501 aaaatcgaaa taaagctgac tggggctaag gaacgcgaga aacgcaaggt cattaccagg
     1561 gcggtaattg gggccaaacc tgttaccgtc aagactgaga gcaaacaacc gtgaatcatt
     1621 caccgcttga agaagttgga cgcacccgcc gcagttttct ttcgcttgcc ggcaagggcg
     1681 tcggactagc tgcgctctcg tccgtcacag tcgctaacct cctgaaaaac gtcaccgcgg
     1741 cgacgacgag tgtcgcgcat ctcacgccgc agcaggcggc catggatgaa gattactggt
     1801 cgacaatcca gaactcattc agcgtcacgc gcggcatcat caatctcaac aacggcggtg
     1861 taagccccag tccgcggatc gtgaccgaag ccctggtgcg atacatttgg cagcaggaag
     1921 acgcaacggc gtacacgatg tggcagatcc tcgagccgca atcagaaacg attcgcaccg
     1981 gtttggctga gttgttcggc tgtgaccgtg aagagatcgc gatcacgcgg aacgcgtctg
     2041 aatcgctcga gacattgctg ctcggtttag acttgaagtc tggcgacgaa gtgctgacga
     2101 cgacgcagga ctatccgcgg atgctcacca cgattcgtca gcgcgaaaga cgcgaaggca
     2161 tcaggttgag cgtgatcaag attccgatcc cgccgaagaa catcgaagaa attacggcgg
     2221 cgttcgagcg tgccat
//
LOCUS       DATDBY010000647         2978 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1517024, whole genome shotgun sequence.
ACCESSION   DATDBY010000647 DATDBY010000000
VERSION     DATDBY010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2978
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1517024"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VIT19_12185"
     CDS             complement(<1..537)
                     /locus_tag="VIT19_12185"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5839788.1"
                     /translation="MSRIALVHDYFVQMGGAERVAEAMHESFPSAPMYTTVALPHSLP
                     QRLRMADIRTSPLQHLPSMERRFRHYFMLYPFAIENFDLSEYDLIFSSSSGYAKGVRR
                     RRNAIHVCYCHTPMRWVWRYDDYVARERFGRLERTLLPAMLWPLRQWDLRAARQPNYY
                     IANSRLVADRIKKIYGREA"
     gene            complement(588..1808)
                     /locus_tag="VIT19_12190"
     CDS             complement(588..1808)
                     /locus_tag="VIT19_12190"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5839789.1"
                     /translation="MKILFYNHTGQVSGAERVLQMILNGLDRGRYQCVVACPEDSKLL
                     ELMNAAGERTRGLRLLEARFTWRPDRLVQYLASFVQVIRDARTIVTEEAPDAIHANSI
                     RAGIVMAAATIGLGVPVIWHGHDVLPRHPLSSVVRLFALMSARNHILAVSQAVVTGFR
                     GALLKPFGRRVPIRVVHNAVDLDKFKPNSKTRVTARAALGLVGAQSVIGMVGQLTSRK
                     GQLELIKSFARVAREIPDAVLLIVGEPLFNRDEEYAAELRRTAASLSIDDRVRFLGGR
                     SDVPELMQAMDVLVVNSHEEPFALTVLEGLASGVPVVATAVGGTPEMITDGENGCLVP
                     ARDNEALAESLITLLHEPELRGWLGHNARQVAKVRFSTDRFLKEVDAFYMQLPHQATP
                     RLTPQLLDEKLATD"
     gene            complement(1813..>2978)
                     /locus_tag="VIT19_12195"
     CDS             complement(1813..>2978)
                     /locus_tag="VIT19_12195"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEY5839790.1"
                     /translation="QQFWSTPLAGWVTLLGIIFFLEIFNPLQGSLFVGLSGALFLLVP
                     LVWFYFGQAVNEKFMHTAMKLVVLLGIIGSLYGVYQLMFGYPTFEQYWIDNTDNYQSI
                     AVGHVKRALGTFSSAEEWGRYTEIGALIALGFFAGARQLRTRVGWLVCAALLLGGLLL
                     SGQRSAVFGFLVGVVSLIMFSANTWRKGFARLAMLLIPMALLFVLAQAPTDDELWSKG
                     EDERVSAVLTHTQRGTLKPTGEDSLQVRFQNWGDLITSVIPYRPLGAGIGAGSLSDMR
                     TNPDSDLPPIDNFILVLAITCGIPGALVFVWILLRASWLSARLARAGESGSRNATINR
                     VAAAIMPALILNSVFGLTFSIYSVAPVAWLLIGWISAEALRARENNEREVLVI"
BASE COUNT          695 a          904 c          819 g          560 t
ORIGIN      
        1 ggcttcacgg ccgtaaatct tcttgatccg gtccgcgacc aggcgcgagt tcgcgatgta
       61 gtagttcggc tgacgcgcgg cacgcaaatc ccattgtcgc agcggccaaa gcatcgccgg
      121 caacaaagtg cgctcaagtc ggccgaaccg ttcgcgcgcc acgtaatcgt cgtatcgcca
      181 aacccaacgc atcggcgtat ggcaatagca aacatgaatc gcattgcggc gccggcgcac
      241 gcctttcgca tagcccgagc tgctgctgaa aatcaggtcg tattccgaga ggtcgaagtt
      301 ctcaatcgcg aacgggtaca gcatgaagta gtgacgaaag cggcgctcca tcgacggcag
      361 gtgttgcagc ggcgaggtgc ggatatcagc catgcgcagt cgctgcggca agctgtgcgg
      421 cagtgccacg gtggtataca tcggcgccga cggaaatgat tcgtgcatgg cttccgccac
      481 gcgctcggcg ccgcccattt gaacaaagta atcgtgtacg agtgctattc tggacaatct
      541 tttgtctccg gcagtcatac caataaacgc cgaaaacagt cctgatttca gtccgtggcg
      601 agtttctcgt cgagcaattg tggagtgaga cgtggagtgg cttgatgagg cagctgcatg
      661 tagaaggcat cgacctcttt gaggaagcga tccgtggaaa aacgaacttt tgcgacttgg
      721 cgggcattat gccccagcca cccacgcaac tcaggttcat gcagcaaagt gatcagcgat
      781 tcggcgagag cttcattgtc ccgcgcgggc acgaggcagc cgttttcacc atcagtgatc
      841 atttcgggcg tgccgccaac cgcagtcgcg accacgggaa caccgctcgc caggccttcg
      901 aggacggtca gcgcaaaagg ctcttcgtga gaattcacca ccagaacgtc catcgcttgc
      961 atcagctcag gcacatcgct gcgcccaccg aggaacctga cccgatcatc gatgctgagc
     1021 gatgcagcag tgcggcgaag ttctgccgcg tactcttcat cgcgattgaa cagaggctcg
     1081 cccacaatca gcagaacggc gtcgggaatt tcacgcgcca ctcgggcaaa cgatttaatc
     1141 aattcaagct gccccttgcg tgaagttaac tgaccgacca taccaatgac cgattgcgca
     1201 ccaaccagcc cgagtgcggc gcgcgcggta actctcgttt tggaattggg tttgaacttg
     1261 tcgagatcca ccgcgttgtg aaccacgcga atcggtacgc gacgaccaaa cggtttcagc
     1321 agcgcgcccc ggaaaccggt gaccaccgcc tgcgacaccg caagaatgtg attgcgcgcc
     1381 gacatgagcg cgaacagcct gacgaccgag ctaagcggat gccgcggcag aacgtcatgg
     1441 ccgtgccaaa tgactggcac acccaatccg atggtcgcgg cggccatcac gatgccggcc
     1501 ctgatgctgt ttgcgtgaat tgcgtcgggg gcttcttcgg taacaatggt ccgcgcgtct
     1561 cgaatcacct gtacgaatga tgccaaatat tgcacgagcc gatcgggtcg ccaggtaaat
     1621 cgtgcttcca atagacgtag cccgcgggtt cgctcgcccg ccgcattcat caattcgagc
     1681 aacttgctgt cttccggaca cgcaaccaca cactggtatc gtccgcgatc gagcccgttc
     1741 agaatcatct gcagcactcg ttcagcgccg ctgacctgac ccgtgtgatt gtaaaaaaga
     1801 atcttcattg aatcagatga ccagcacttc gcgttcatta ttctcgcgcg cacgcaatgc
     1861 ttcggcgcta atccatccga tcaacagcca tgcgaccggc gcgactgaat agatcgaaaa
     1921 cgtcagcccg aacaccgaat ttaagatcag cgccggcatg atggccgcgg cgacgcgatt
     1981 gatagtcgca ttgcgacttc ccgactcccc ggctcgcgcc agtcgtgctg ataaccatga
     2041 agcgcgcagc agaatccaaa caaacaccag cgctccggga atgccgcagg tgatggcgag
     2101 caccagaatg aagttgtcga tcgggggcaa gtcggaatcg gggttcgtgc gcatatcgct
     2161 caacgaaccc gcgccaatgc ccgcgcccaa gggccggtac ggaatgaccg aggtgatgag
     2221 atcgccccag ttttgaaatc gaacttgcag gctgtcttct cccgtcggct tcaaagttcc
     2281 ccgctgtgtg tgcgtgagca cggcgctgac ccgctcatct tcgcctttgc tccaaagctc
     2341 atcatcggtc ggagcctgcg caagaacgaa tagcagggcc atcggaatca gaagcattgc
     2401 caggcgagca aatcccttgc gccaggtgtt ggcgctgaac atgatcaacg agaccacgcc
     2461 gacgaggaac ccgaaaacag ccgatcgttg tccgctgagc aagagaccgc cgagcaataa
     2521 cgctgcgcag actaaccaac caacccgtgt ccggagctgc ctcgcgccgg caaagaatcc
     2581 aagcgcgatg agcgcgccga tttccgtgta gcgcccccac tcttcggcgc tgctgaacgt
     2641 ccccagcgcg cgcttcacgt gaccgaccgc gatcgactgg taattgtcgg tgttgtcgat
     2701 ccaatactgc tcaaatgtgg ggtagccgaa catcaactga tagacaccgt aaagcgatcc
     2761 gattatgccg agtagcacca ccagtttcat cgccgtgtgc atgaactttt cgttcactgc
     2821 ctggccaaag taaaaccaga caagcggcac caacaggaac aacgcgccgc tgaggccgac
     2881 gaacaaactt ccctgcaacg gattgaaaat ttccaggaag aaaatgattc ccagcaacgt
     2941 cacccaaccc gccagcggcg ttgaccagaa ttgctgca
//
LOCUS       DATDBY010000648         4724 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2123445, whole genome shotgun sequence.
ACCESSION   DATDBY010000648 DATDBY010000000
VERSION     DATDBY010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4724
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2123445"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3376
                     /locus_tag="VIT19_12200"
     CDS             <1..3376
                     /locus_tag="VIT19_12200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839791.1"
                     /translation="ENITDADIFSGRAIGEILVHPTDPNIIFASSTSGIGGIGPAQPG
                     TVPNRGLFRSTNAMSASPTFTRLAVTSLGLGENRNVVDMVMEPGNPNRIVVSVTGTAA
                     IATTTPPTPADNGGLFLCTNALDAAPIFTKTLDITGNTTTATRTELAITKIASVVTIY
                     AASALNTGTVFRSTDGGGTWTQAVNNNFCNPQCFYDIAIDIDPTNAARVYLGGSPALP
                     FGISTNSGGSFVTSATGLHVDSHVIAVAPSDPNVVYFGSDGGIYRSNNAGGSWTSLSN
                     TTFSATQFMSVAIHPTDPNFTIGGTQDNGTEMLRFDGTWRRTDFGDGGYAAIDQSSPT
                     AGATMYHTYYNSNAPGGSVMGYAFSEDVNAFENWTFRGCQIGGTGGGITCTDSVLFYA
                     PLEVGPGTPNTVYYGTDRLYRSDNKGVTHVIASQAPIEVNTAVTPPATIPISAIGISP
                     NNDNVRIVGLRLGGIWGTTTGSTVLTNLDPSNQVPNVFIARAAIDANNQTAYVTLSAF
                     GVTNVWKTTSLSSPNWTAAAGSGLNVLPQVPVNAFVIDPADSNRLIAGTDIGVYSSDD
                     GGANWTPVGTGLPRVATFDLGITSERKLRIATHGKGMWEIPLPGFQVGPAHPIFAGVA
                     QVSDPQQCDRLTLSWAPATSSNPNADIAYDIYRVASMAQGDGTQTPSFTPSTGNRIAT
                     GVRGTSFTDTGLTRNQMYFYIVQAHDLNNGSIDTNNTGNLVVRYSAPTSATSTGALFA
                     NENFETSAANNRFTPPLQDSATPNQGLAAFQRVPNINNGGVSSNAMYAPDFNPGENPG
                     TGDGGPSDFSAIIGPFQLTPDSAMEFDHFFTAESAYDGGVMELAIGGPNFNAQPFPDN
                     VTTFDLGNHFIQNGYNGKLDGTFEGVILSTMQGRRAFTGSGGPSRVKISLRAFAGGLL
                     NPGSLPVYIRFRMTSDLGTSAGPLSGWYIDNVAVHNLGVCPPSVCGTRTNVALSSNGS
                     NAIASSTHSSGVYPASAAINGDRTGVNWGTANGGWNDGTRAEYPDSFEVAFPSAQRID
                     EINVFSLQNDWRNGPQPTLLTPADAEGILDFVVEYWDGTNWVAVPNGTVTGNDKAWRQ
                     FLFAPVVTQKIRITITNSRNNWSRLVEVDAWGCPAS"
     gene            3528..>4724
                     /locus_tag="VIT19_12205"
     CDS             3528..>4724
                     /locus_tag="VIT19_12205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839792.1"
                     /translation="MRRIQKDKLAAGFVITVLAAVVCATPFVRRGSASDLMLKRGEVG
                     AVANRTARVLTPAPLGPETTPFNGTYSDVPNPIACGPRHKFTIPAGKTRIVAVATADV
                     PSNDIVLKLYGPSGDQLSSNDTGTSPESATYEASGGIPAGAYEVEVCPYNNPSVPATA
                     PFTYRGTFTTDDTAVPNPVSTPTPGPVSTPTPGPPPIPPRYHNYAAGPGLGDSAGEPT
                     VGFNLTTKRAMYIAGLQTLQITFPENIAPVGTLPEAGPADWKDVSFVTTRIKSLDPIL
                     FTDQGTGRTFVSQLNDVTQVYSATGLGPTLIGLNSLMAYTDDDGATWTPAQINPPDGS
                     YDHQTVGSGPYPAALAALGNPINKGSAVYYCAQVGVTAFCSRSDDGGLNFGRPVPIYQ
                     AVSAGPV"
BASE COUNT         1019 a         1411 c         1357 g          937 t
ORIGIN      
        1 agagaacata accgacgcag acattttcag tggccgcgcg attggcgaga ttctggttca
       61 tccaaccgat ccgaacatca tttttgcaag ctcgacttct ggtatcggcg gcattgggcc
      121 ggctcagcca ggtacagtgc cgaatcgcgg actgttccgc tcgaccaacg cgatgtcagc
      181 ttcaccgacg ttcacgcgac tggcggtgac cagcctcggc ctcggcgaaa accgaaacgt
      241 cgtggacatg gtaatggagc ccggcaatcc caatcgcatc gtggtgtcgg ttaccgggac
      301 ggctgcgata gccacgacca ctccgccaac gccggccgac aacggcggtt tgttcctgtg
      361 cacaaacgcg ctggatgccg ctccgatttt caccaagacc ctggacatca cgggaaatac
      421 aacgacggcg accaggactg agttggccat cactaaaatt gccagcgtcg tgacgatcta
      481 cgctgcgtca gccctgaata ccggaacggt atttcgttcg actgacggcg gcgggacgtg
      541 gacgcaggca gtgaacaaca acttctgcaa tccgcagtgc ttctacgaca tcgcgatcga
      601 catagatccg acgaatgccg ctcgcgtcta tctcggcggc tcgccggctt tgccgtttgg
      661 catctcgacc aacagtggag gttcattcgt gaccagcgcg accggtctgc atgttgattc
      721 gcacgtgatc gcagtcgctc cttctgatcc gaacgttgtc tacttcggca gtgacggcgg
      781 aatttatcgt tcgaacaatg ccggcgggtc gtggaccagt ttaagcaaca cgacttttag
      841 cgcgacgcag ttcatgagcg tcgcgatcca tccgacggat ccgaacttca ccatcggcgg
      901 gacccaggac aacggcacag agatgctgcg ctttgacggc acgtggcgac gcacggactt
      961 tggcgacggt ggctatgcgg cgatcgatca aagttcaccg acggccgggg cgacgatgta
     1021 tcacacttat tacaactcaa acgcgccggg cgggtccgtc atgggctacg cgttcagcga
     1081 agacgtcaac gcgtttgaaa actggacatt tcgcggctgc caaatcggcg gcaccggcgg
     1141 cgggattacc tgtaccgact cagtgctgtt ctacgcgccg ctcgaagttg ggccgggcac
     1201 gccgaacacc gtctattacg gaaccgatcg actctatcgt tcagacaaca aaggcgtgac
     1261 gcatgtgatc gctagtcagg cgccaatcga agtcaacacc gcggtcacac caccggcaac
     1321 aattccgatc agcgccattg gcatctcgcc gaacaacgac aacgttcgaa ttgtgggatt
     1381 gcgacttggc ggaatctggg gaacgacgac cggctcaact gtgttgacga acctggatcc
     1441 gtccaatcaa gtccccaacg tcttcatcgc gcgcgcggca atcgacgcga acaaccagac
     1501 cgcctatgta accctctcgg cgttcggcgt aacgaatgtt tggaagacga cgagtcttag
     1561 ttcgccgaac tggaccgcgg cggccggctc cggcctcaac gtcctgccgc aagtgccggt
     1621 caacgcgttt gtgattgatc cggccgactc taaccggctg attgccggaa cggacatcgg
     1681 cgtttacagc tcagatgacg gcggcgcgaa ctggaccccg gtcggcacag gtttgccacg
     1741 cgtggcgacc ttcgacctgg gcatcacgtc cgagcgcaag ctgcgcatcg cgacgcacgg
     1801 aaaaggcatg tgggagattc cgctgccggg attccaggtt ggtcccgctc atccaatctt
     1861 cgctggcgtc gcgcaagtat ctgacccgca gcagtgcgat cgcctgacgt tgagttgggc
     1921 gccggcaacc tcatccaatc cgaacgccga cattgcgtac gacatctatc gcgtcgcttc
     1981 aatggcccag ggtgacggaa ctcagacccc atcgttcacg ccgtcaacgg gtaaccgaat
     2041 tgcgacgggc gtgcgtggta cttcgttcac ggacacggga ctgacgcgca atcagatgta
     2101 cttctacatc gtgcaggcgc atgacctgaa caacggcagc atcgatacta acaacaccgg
     2161 gaatcttgtg gtgcgttaca gcgcgccaac atcggcgaca tccactggag cattgttcgc
     2221 gaacgagaat tttgagacat ccgcggctaa caatcgcttc acaccaccgc ttcaggattc
     2281 ggccacaccg aatcagggcc tcgcggcctt ccagcgagta ccgaatatca acaatggcgg
     2341 tgtttcatcc aacgcgatgt acgcgcccga tttcaatcca ggcgagaacc ctggcactgg
     2401 cgacggtgga ccgagtgatt tctcggcgat tattgggccc ttccagttaa ctccggattc
     2461 agcgatggaa tttgatcact tctttaccgc cgaatcagcg tatgacggcg gcgtgatgga
     2521 acttgccatc ggcgggccga actttaacgc gcaacctttc ccggacaacg taacgacgtt
     2581 tgatctgggt aatcacttca ttcaaaacgg gtacaacgga aaactcgacg gcacgttcga
     2641 gggagtcatt ctctcgacca tgcagggacg acgagcattt acgggctcgg gcgggccgag
     2701 ccgcgtgaag atttcgcttc gggcttttgc cggcggactc ctcaacccgg gtagtttgcc
     2761 tgtgtacatt cgcttccgca tgacttcaga ccttggcacg agcgcaggtc ctttgagcgg
     2821 ttggtatatc gacaacgtag ccgttcacaa ccttggcgtc tgtccgcctt cagtttgtgg
     2881 cacgcgcacc aatgtggcgc tcagctcgaa cggatccaat gccatcgctt cgagcacgca
     2941 cagcagcggc gtctatccag cgagtgccgc catcaacggt gatcgcacgg gcgtcaactg
     3001 gggcacggct aacggcggct ggaatgacgg cacgcgcgca gagtatcccg acagcttcga
     3061 agtcgccttc ccgagcgcgc agaggattga cgagatcaat gtcttcagcc tgcaaaacga
     3121 ctggaggaat gggccgcagc cgacgcttct gacaccggct gacgccgaag gcattctcga
     3181 cttcgtagtc gaatattggg acggcacaaa ctgggtggcg gttccaaacg gcaccgtcac
     3241 ggggaatgac aaagcctggc ggcaattcct gttcgcgccg gtggtgacgc agaagattcg
     3301 catcacgatc acgaactcgc gaaacaactg gagtcgtctg gtcgaggtcg atgcctgggg
     3361 ctgtccagcg tcataacgca aaccttcagc cttcccccct ttggattggt acgggttcag
     3421 ccgcggccgg ctcaagtttt actcaagctg ccgcggctac gctgggtccg aaattggaaa
     3481 tcaagcgccg gagcgcgacc gctatctgga aagaggagag aacagcaatg cgaaggattc
     3541 aaaaagataa gttagcagcc ggattcgtta tcacggttct tgcggccgtc gtttgtgcga
     3601 cgccgtttgt gagacgcgga agtgcttcag acttgatgtt gaaacgtggc gaggttggcg
     3661 ccgtggcgaa tcgcaccgca cgggtgctta ctccggcgcc gctcggtcct gagacgacgc
     3721 ctttcaacgg cacgtacagc gacgtgccga acccgatcgc ctgtggaccg cgtcacaagt
     3781 tcaccatacc ggcgggcaag acacgaatcg tcgcggtcgc cactgcggac gttccaagca
     3841 acgatatcgt tctcaagttg tacggcccat caggggatca gttgagttca aacgacaccg
     3901 ggacgagtcc cgagagcgcg acttatgaag cctctggcgg cattcctgcg ggcgcatatg
     3961 aagttgaagt ttgtccttac aacaatcctt ccgtgccggc gactgctcct tttacttatc
     4021 gaggaacttt cacgaccgac gacacggccg ttccgaatcc ggtgagcaca ccgacgccag
     4081 gaccagttag cacgcccact ccgggtccgc cgccaattcc tcctcgttat cacaactacg
     4141 cagcggggcc tgggctgggc gatagcgccg gcgagccgac cgttgggttc aatctaacaa
     4201 ccaagcgcgc catgtacatc gccgggttac agacgctaca gatcacattc ccggaaaaca
     4261 ttgcccctgt tggaacactt cctgaggccg gaccggcgga ttggaaggat gtttcttttg
     4321 tcacgacgag aataaaatca ctcgacccaa ttctgtttac cgatcaggga accggccgta
     4381 ccttcgtttc gcagcttaat gacgtcacgc aggtttacag cgctaccggg ctggggccga
     4441 cgttgattgg cttgaatagc ctgatggctt acaccgacga cgacggcgcc acctggacac
     4501 cggcgcaaat aaatccacct gatggcagtt acgatcacca gacagtcggc agtggcccgt
     4561 atccggcagc gctggctgct ctcggaaatc cgatcaacaa aggaagcgcg gtttactatt
     4621 gtgcgcaggt cggcgtcact gcgttctgtt cccgaagcga cgatggtgga ctgaacttcg
     4681 gccggccggt gccgatttac caggcagtgt cggccgggcc agtc
//
LOCUS       DATDBY010000649         2378 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2795078, whole genome shotgun sequence.
ACCESSION   DATDBY010000649 DATDBY010000000
VERSION     DATDBY010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2795078"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..674)
                     /locus_tag="VIT19_12210"
     CDS             complement(<1..674)
                     /locus_tag="VIT19_12210"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HEY5839793.1"
                     /translation="MIQAILFDFNGVIIDDERIHLRAYREILQEYDVPLTDEEYFPCL
                     GMDDVTFTRAAFTRAGREVDDETVRVIVDREHELHRSIIEAEVPFAAGVVTFIKEAAR
                     EFQLAIVSMAELSEIEHVLGPANLLHHFSVFVTAQPGLNHKPAPDCYLRGLELLNAKR
                     RTERQLPLLPKECLVIEDAPPGVKAGRGAGMRTLGVTNTVAESLLRAAGADVVTASLA
                     DWNTDAV"
     gene            complement(853..1743)
                     /locus_tag="VIT19_12215"
     CDS             complement(853..1743)
                     /locus_tag="VIT19_12215"
                     /inference="COORDINATES: protein motif:HMM:NF017970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HEY5839794.1"
                     /translation="MTTPQPMTVEAIRSVTLFASLPDQEAEELVTLLQSRQVPEGTLL
                     FRAGEQGDAMYLIQSGRVRIAVDDSEGQQIVLAELAQGDFFGEMSLIDGKQRSADAHV
                     IEDAQLSVLSRDNFLRYINTHPGVALEMLSAVFQRLRHTDRMLQQRVSRNVNEEQAKR
                     MTLSDRAADLLAEFGGSWKFIGVSLAIIAFWIFLNSYILIRGFDPMPYQMLNLTLAVI
                     AGLQAPIIMMSQNRQGSKDRLRADLDYQVNLKNELALSEVLRRLDVLESERLPLLFAE
                     QNERLGDGKKVSSIKSTSAG"
     gene            complement(1865..>2378)
                     /locus_tag="VIT19_12220"
     CDS             complement(1865..>2378)
                     /locus_tag="VIT19_12220"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5839795.1"
                     /translation="GLDRPTSGEVLFDSKPLGPLTKKQMARYRRFSVGMIFQNFNLIP
                     TMTAAENVWLALAFGGVRGAERRKRAAELLERVGLGDRMEHRPAELSGGEQQRVAIAR
                     ALANHPRLLLADEPTGNLDSTRAHELLSLLREMVASDRLTVLLVTHDHELASSFADRI
                     VMMKDGKVVE"
BASE COUNT          525 a          723 c          624 g          506 t
ORIGIN      
        1 accgcatctg tgttccagtc ggcaagactc gccgtcacga cgtcggcgcc ggccgcgcgc
       61 agcagcgact cggctacagt gttcgtcacg cccagggttc gcatgccggc cccgcgcccg
      121 gctttgactc ccggcggcgc atcttcgatc accagacatt ccttcggcag cagcggcagt
      181 tgtctctcgg tccggcgctt cgcattcagc aactccagcc cgcgcagata gcaatcgggc
      241 gccggcttgt gattcagccc cggttgcgca gtcacgaata cagaaaagtg gtgaagcaaa
      301 tttgccgggc cgagcacgtg ttcgatctcg cttaactcag ccatgctgac gattgcgagt
      361 tgaaactccc gtgcggcctc tttgatgaac gtgacaaccc cggcggcgaa aggcacttcc
      421 gcttcaatga tcgaacggtg cagttcgtgt tcacgatcga caatgacgcg caccgtttcg
      481 tcgtcaacct cgcgcccggc gcgcgtgaac gccgcccgcg tgaaggtcac gtcgtccata
      541 cccagacagg gaaagtactc ttcatccgtc agtgggacgt cgtactcttg caggatctcg
      601 cgatacgcgc gcaagtgaat gcgctcgtcg tcgatgatca cgccgttaaa gtcgaatagg
      661 attgcctgga tcatgtgtaa actcccttct cctctgggag aagggttggg gatgagggct
      721 tagcctgaca tagcaccccc aagtcttccc ttcgactttc cagcgaactg gagagtaaga
      781 agcaatatca gaatgtgccg tggcaaaacc ctcaccctgc cctctcccat atgggagagg
      841 gggcgagact aactaaccgg cacttgtcga cttgatagaa ctaacttttt taccatcgcc
      901 caaccgctca ttttgttccg cgaacaaaag cggcagccgc tcgctctcga gcacgtcgag
      961 tcttctcaaa acttcagata acgcaagttc attcttcaga ttcacctgat agtccaaatc
     1021 ggcgcgcagg cgatccttcg agccctggcg attctgcgac atcatgatga tcggcgcctg
     1081 caaacccgca atcaccgcga gggtaaggtt caacatttga tacggcatcg gatcgaaccc
     1141 gcgaatcaga atgtacgagt tgagaaaaat ccagaacgcg attattgcca acgagacgcc
     1201 gatgaatttc cagctgccgc cgaattctgc cagcaaatcg gcggcgcgat ccgacaaagt
     1261 catccgcttt gcctgttctt cgtttacgtt gcgcgaaacg cgctgctgca gcatccggtc
     1321 agtgtgccgc agacgttgga agacggcgct cagcatctca agcgcgaccc ccgggtgcgt
     1381 attgatgtag cggaggaaat tgtctcggga caagactgac aactgcgcgt cctcgatcac
     1441 gtgagcatcg gcggagcgtt gcttgccatc gatgagcgac atctcgccaa agaaatctcc
     1501 ttgcgcgagt tcggccaaaa cgatttgctg accctcggaa tcgtcaaccg cgatgcgcac
     1561 acgcccgctt tggatcagat acatcgcatc gccctgttca cctgcgcgaa acagaagcgt
     1621 gccttccgga acctgacgac tctgaagcag cgtgaccagt tcctcagctt cctgatcagg
     1681 cagcgacgca aacaaagtca ccgaacggat ggcttcaacg gtcattggtt ggggggtggt
     1741 catgaaatta acctcggatt gcgaatttcg aattgcggat ttttaagact ggtaacactg
     1801 ggctcgattc ttacgacacg gatggtttat ttaaattcgc acttcgaaat tcgcaatccg
     1861 aaatctattc gactaccttt ccatccttca tcatgactat tcgatccgca aaactgctgg
     1921 ccagttcatg atcgtgcgtg acgagcaaaa ccgtgagccg gtcgctcgcg accatttcac
     1981 gcaacagaga aagcaattcg tgcgcgcgtg tcgagtctag atttccggtc ggctcatccg
     2041 caagcaaaag gcgtggatga tttgccaggg cgcgcgcgat cgccacccgc tgctgttcgc
     2101 cgcctgagag ttccgccggc cgatgctcca tccgatctcc cagcccgacc cgttccaaca
     2161 gttcggccgc tcgcttacgt cgttcagcac cgcggactcc gccaaacgcc aacgccagcc
     2221 acacgttctc agccgctgtc atcgtcggaa tcaaattaaa gttttgaaag atcatcccga
     2281 cggaaaagcg ccggtaacgc gccatctgtt ttttcgtcag cggcccaagc ggtttcgaat
     2341 cgaacaggac ctcgccgctc gtcgggcgat cgagcccg
//
LOCUS       DATDBY010000650         2538 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2541003, whole genome shotgun sequence.
ACCESSION   DATDBY010000650 DATDBY010000000
VERSION     DATDBY010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2541003"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            404..2164
                     /locus_tag="VIT19_12225"
     CDS             404..2164
                     /locus_tag="VIT19_12225"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098024 - virus tail, fiber [Evidence
                     IEA];
                     GO_process: GO:0019062 - virion attachment to host cell
                     [Evidence IEA];
                     GO_process: GO:0046718 - viral entry into host cell
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HEY5839796.1"
                     /translation="MKKLRSCAAALLAVAVVTCLSISVAGQTASDGNLASVAGGGSSA
                     RWEITATNAGGTLTISFPDGRSFRKTFRAGDSPQVTIGDKYFDNLPDGVYSYELRLAS
                     APSDAAKKARGKDDDPENERAGRKRAPVPASTQSGSFAVVNGSIVVAGGSEPEQKRDA
                     KASTRPAPRTTASANVLQRIRNNHRAFFMPDDVIPDDLIVQGSACVGLDCVNGEVFGF
                     DTIRMKENNTRLQFDDTSTSAGFATNNWQIRANDQASGGSSFLGFVDQGATGNSETGT
                     IIGRFDAGAPANSFRVSSNGKVGLRTATPVLDIHMNTSDTPAVRFEQNNSGGFTAQTW
                     DIGANEANFFVRDVTGGSRLSFRIRPGAPTSSIDISADGDVGIGTAGPNARLDLKQAS
                     DDFLGGLHLRRASTNDTWAIVTGGDNNLYMGYATDASLANAVADFTIFPLVVTTNNRV
                     GVRTAAPDQALSVNGDASKTGGGSWQVFSDERLKNIKGKFTPGLSAVMRLQPVRYQYK
                     PDNALALKSEGDHVGFRAQELREIIPDAVSTSESGYLMVNNDPILWTMLNAIKEQQQQ
                     IAGLKAEVRKLQTAARRRRR"
     gene            complement(2265..>2538)
                     /locus_tag="VIT19_12230"
     CDS             complement(2265..>2538)
                     /locus_tag="VIT19_12230"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEY5839797.1"
                     /translation="CLLLLAAYAVLLTRLITDARRSRDRTGMLVIMAIVGGLIFQIAL
                     NVGMAVGLLPVIGVPLPLMSAGLSSMLATFIAIGFAISVQLRRFVN"
BASE COUNT          610 a          709 c          728 g          491 t
ORIGIN      
        1 agccgatgcg gatcaggacg gaatcggaaa cgtctgtgat gcccaaaccg gcccgccgac
       61 caaggaccaa tgcaagaatg gcgggtggca gttcttcaac tatccgcgta cgttccagaa
      121 tcagggagac tgtattcagt atgtgaacac cggcaagtaa caccggttca cctgcagtca
      181 ctgactgaca aagcgtgaag gcgcaggctc attttgggct tgcgccttcg tgcatttaag
      241 tactcgacgc gaaacccttg acatcgttga actcccctgc tacaagacgc actaagcgac
      301 gtaaacttaa acaaattgta atcgtggcct ggtccgattg ccctacctta gctcgtcgcg
      361 tttcccattg gccgcggttc cccaaccgac aggaggctta gcaatgaaaa agttacgatc
      421 ttgtgcagca gctttattag cagttgcggt agttacgtgt ctttcgatat cagtagctgg
      481 tcaaacggcg agcgacggca atctggcgag cgtagccggg ggcgggtcct cggcgaggtg
      541 ggaaattacc gcgacgaacg ccggcggcac gttaaccatt agttttccgg acggccggtc
      601 gtttcgaaag actttccgtg caggcgattc tccgcaagtt acgatcggcg ataagtactt
      661 cgataatctt ccagatggag tctactcata cgagctgcga ctcgcctctg cgccgtcaga
      721 cgcggcgaaa aaagcccgtg gcaaagacga cgatcctgaa aacgagcgag ccggacgcaa
      781 acgcgcgccg gtcccggcgt cgactcaatc cggatcgttc gcggtggtta atggatccat
      841 cgtggttgcc ggcggctccg aaccggagca gaagcgtgac gcgaaggctt cgaccagacc
      901 ggctccgaga actacggctt ctgccaatgt gcttcagcga attcgtaaca atcaccgagc
      961 gttcttcatg cctgacgacg tgattcccga cgacctaatt gtgcagggca gcgcgtgcgt
     1021 tggactggac tgtgtgaatg gcgaagtctt tggatttgac acgatcagaa tgaaggagaa
     1081 caacacccgc ttacagtttg acgacaccag tacctctgcc ggctttgcga caaacaactg
     1141 gcagatcagg gccaacgacc aagccagcgg gggcagcagc ttcctgggct ttgtcgatca
     1201 gggcgccacc ggcaattccg aaaccggcac cattatcggt cgattcgacg ccggtgctcc
     1261 cgccaattca ttccgcgtga gcagcaacgg taaagtcgga ctcagaacgg cgacgccggt
     1321 gctggacatt cacatgaaca ccagcgacac gccagccgtt cggtttgaac agaacaattc
     1381 aggtggcttc accgcccaaa cgtgggacat cggcgccaac gaagctaact tctttgtccg
     1441 cgatgtcaca ggcggctcgc gtctttcctt ccgcattcga ccgggcgcgc cgaccagttc
     1501 aatcgacatc tcagcagatg gcgatgtggg catcggcact gcaggtccga acgcgcgact
     1561 ggatctcaag caagctagtg atgatttcct tggcggtctt catttgcgac gggccagcac
     1621 gaatgacacc tgggccatcg taactggagg cgacaacaat ctatatatgg gctatgccac
     1681 cgacgcgtca ctagccaacg cagtagctga tttcaccatt tttcctctgg tggtgacgac
     1741 caataacagg gtaggcgtca ggacggctgc tcccgatcag gccctatcgg tcaacggaga
     1801 cgccagcaaa accgggggtg gctcgtggca ggtattctca gatgaacggt tgaagaacat
     1861 caagggcaag ttcaccccag gtttgagtgc ggtcatgcgg ttacaaccgg tgcgttacca
     1921 gtacaagcct gacaatgctc tagccctgaa atcagaagga gatcacgtcg gtttccgcgc
     1981 ccaggagttg cgcgagatca tcccggacgc agtgagcacc agcgagagcg ggtacctgat
     2041 ggttaataac gatccgattc tgtggacgat gctcaatgcc attaaggagc agcagcagca
     2101 gattgctggg ttgaaagcag aagttcgaaa actacaaacc gcggcgcgca gacgcaggag
     2161 ataagcggcc agggacgctt caccaggggc gcgagcgcca acgacaccgt tcgttgcgct
     2221 tgcgcctttt ttattcgcct tggcgaaggc cgagcaaaag ggattcagtt tacgaaccgg
     2281 cgcagttgga cgcttatcgc gaatccgatc gcgataaagg tggcgagcat tgaagagagc
     2341 cccgcgctca tgagcggcaa aggcacgccg atcaccggca atagaccaac ggccattccc
     2401 acgttgaggg caatctgaaa tatcaggccg ccaacaatgg ccatgattac cagcatgccc
     2461 gtgcggtcac gcgaccggcg ggcatcagta attaagcggg tcagcaagac tgcgtaagcc
     2521 gcgagcaaaa gcagacag
//
LOCUS       DATDBY010000651         4300 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2485926, whole genome shotgun sequence.
ACCESSION   DATDBY010000651 DATDBY010000000
VERSION     DATDBY010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4300
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2485926"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            110..775
                     /locus_tag="VIT19_12235"
     CDS             110..775
                     /locus_tag="VIT19_12235"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5839798.1"
                     /translation="MKSILLVEDDRSLGATLRDRLAREGYEVSWVETKQRALKRFGES
                     LWDLIILDVSLPDGSGFEIARHIKAHSSVPIMFMTALGTAENRLEGFEIGAEEFIPKP
                     FHLRELLLRVKHVFERHPALHRISCNGRVIELDSRLIVQPDGQRDFLPARDFQLLELL
                     ITSAPRAVSRNEIIDRLWGEDKLGNQRTVDNMIVHLRQSLGDTDSEFIRSVRGVGYQW
                     NME"
     gene            775..1968
                     /locus_tag="VIT19_12240"
     CDS             775..1968
                     /locus_tag="VIT19_12240"
                     /inference="COORDINATES: protein motif:HMM:NF013381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase family protein"
                     /protein_id="HEY5839799.1"
                     /translation="MTKEALIHTSLQRGENEQRKSAEPFQRVSDKPLKRLTDSQASEA
                     TSLKRGVNESSSAKGEIGNLRFQNALARAPQTTPPIWLMRQAGRYHRHYQDLRRQFSF
                     MDLCKQPELAAHVALGPVMDFDFDAAILFSDLLFPLEALGMGLEYTDSGPQLGWKLTP
                     QTFAKLRAVDEAWPGLLFQGDAMRATRQLLPNDKSLIGFVGGPWTLFVYAVEGTHKNV
                     ERAKQEPQLFEKFCQTLVPLLIKNIELQLANGAEVVMIFDTAAGELAPDVFKGEVVSQ
                     LERLTQSFPSKLGYYSKATTREHLNHPLFTGRHWAGLGVDHNWDLRDAFEQFPNGFIQ
                     GNFDQNLLLASGDDFKLRLERFLNPLLKHDRTGWICGLGHGVLPKTPEENVRHFVNTV
                     REVLQ"
     gene            1965..3308
                     /gene="hemN"
                     /locus_tag="VIT19_12245"
     CDS             1965..3308
                     /gene="hemN"
                     /locus_tag="VIT19_12245"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEY5839800.1"
                     /translation="MNDLFAKYDVPAPRYTSYPTVPFWSDMPTTEQWLTELSSAFADE
                     QTTWSLYLHLPFCETLCTFCACNTVITRNHQREIGYRELLLKEWSLYRDRVPGMRERS
                     LLGIHLGGGTPTFFAPENLRQILEPILAETTIDPDRFEASVEVHPGHTTREHLKTLRE
                     LGFTRISIGVQDFDPEVQRIVNRHQPYEVTKTCTDVARELGYTSVNYDLIYGLPKQRI
                     ERFSESVDKTIDLRPDRIALYSFALVPWIKPAQRSYTDEDIPRAAEKRALYEMAREKL
                     QAAGYAEIGMDHFALPHDGMAQAQREGTLHRNFQGYTETRTNVLLGLGVSAISEAPTC
                     FHQNEKAFPVYERRVSQGEIPTFRGHLLSEEDRELREQILEFMTRFEVELRERQPEDA
                     KQFLSSLINDGLVDVQGNRLTLTEQGRPFLRNACMFFDYRLRRQQPQARTFSQAL"
     gene            3467..>4300
                     /locus_tag="VIT19_12250"
     CDS             3467..>4300
                     /locus_tag="VIT19_12250"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5839801.1"
                     /translation="MCPLWFKSLQTLTRKPITVVGAGFSGLTTAYLLTKADRKVRIIE
                     KTARAGGLIRTTRTEHGLVETAANGMLNSARLETMSEDIGVPVLPTRPDGRKRFIYRD
                     KPRQLPLSLAEVLRIPVGLIANAANLRPQPFETIAEWGARVPGKGATEFLLGPALGGI
                     YAGDPKRLSARLIFGRANLPDHIQTYRPKKARVRGTVAPPNGMQQLIDGLVDYLRKRE
                     VEMHFETDARPDTNEPTIVCLSASAAAEYLANASPALSQELARVEMLSLLTATCFFDK
                     EA"
BASE COUNT          973 a         1182 c         1224 g          921 t
ORIGIN      
        1 acgcgacttt gagttttgcg ccgggtcgtg aaggcgggtt tatcgcagag ttgagtttac
       61 cgagtgaggc ccaacccgtt ctggcggaac agcagagaca caagctggca tgaagtcgat
      121 tttgctggtc gaagatgatc gctcgctggg cgcaactttg cgcgaccggc tggcgcgcga
      181 gggttacgaa gtttcgtggg tagagacgaa gcagcgcgcc ttgaagaggt tcggggaaag
      241 tctctgggac ttgatcatcc tggatgtgag tttgcctgac ggttcaggct tcgagattgc
      301 gcgccacata aaagcacatt cttcggttcc tatcatgttc atgaccgcac ttggcactgc
      361 tgagaaccgg ctggaaggtt ttgaaatcgg cgccgaagag tttattccca agccctttca
      421 cctgcgcgag ctgctgctgc gcgtcaagca tgttttcgaa aggcatcccg cgcttcatcg
      481 aatttcgtgc aacggccggg tgattgaact cgacagccgc ctaatcgtgc aaccggacgg
      541 ccagagagat tttctcccgg ccagggattt tcaattgctt gaactcttga tcaccagcgc
      601 gccgcgcgca gtcagtcgca acgaaatcat cgacaggctt tggggtgaag acaaactggg
      661 caatcaacga acggtcgata acatgatagt gcacctgcgg cagtccctgg gcgacactga
      721 tagtgaattc attcggtcgg tccgcggcgt gggataccaa tggaacatgg agtgatgaca
      781 aaggaagctc tcattcacac ctcgcttcag cgaggtgaaa acgagcaacg gaaatctgcg
      841 gaaccgtttc aacgggtttc cgataagccg ttaaaacggc tcacggattc acaggcgagc
      901 gaagccacct cgctgaagcg aggtgtgaat gagagttcgt ccgcgaaagg cgaaattggc
      961 aacctccgat tccaaaacgc cttggcccgc gcgccgcaaa cgacgccgcc catctggctc
     1021 atgcgccaag ccggtcgtta ccaccgtcat tatcaggatc tgagaagaca gttttcgttt
     1081 atggatctct gcaagcagcc tgagttggca gctcacgtcg cgctcggtcc ggttatggat
     1141 tttgattttg acgcggcgat tctctttagt gaccttctgt tcccactgga agcgctcggg
     1201 atggggttgg agtacacgga cagcgggcca cagcttggct ggaaattgac gccgcagaca
     1261 ttcgcgaaac tacgagcagt tgatgaggcg tggccgggcc tgctgtttca gggggatgcc
     1321 atgcgcgcaa cgcgacagtt attgcccaac gacaagagtt tgatcggctt tgtcggcggg
     1381 ccctggacgc tgtttgtgta cgccgtcgaa ggaacgcata agaacgtcga gcgcgcgaaa
     1441 caagagccgc aactgtttga gaagttctgc cagacgctgg ttccgttgtt gattaagaac
     1501 atcgaactac agttagcgaa tggagccgag gtcgtcatga tctttgacac ggccgcgggc
     1561 gaacttgcac ccgacgtttt caaaggtgaa gtcgtgtcgc aactggaacg actcacgcag
     1621 agttttccat cgaaacttgg ctattactca aaagcgacga cccgagagca cctgaatcac
     1681 ccgctgttca ccggcagaca ctgggcgggt ctcggggtcg atcacaattg ggatttgcgc
     1741 gatgcctttg aacaatttcc gaacggtttc attcagggca acttcgatca aaatctgctg
     1801 ttggcgagcg gggatgattt caagctaagg cttgaacggt ttctcaatcc attattaaag
     1861 cacgatcgca cgggctggat ctgcgggttg ggccacggtg tcctgccgaa aacgccggaa
     1921 gagaatgtgc gacactttgt taatactgtt agagaggttt tgcagtgaac gacctttttg
     1981 ccaagtacga cgtcccggcg ccgcgttaca cgagttatcc gacggtcccc ttctggagcg
     2041 atatgccgac gactgagcag tggctgacgg agctctcgtc agctttcgca gacgagcaga
     2101 caacctggtc gctttatctt caccttccat tctgtgaaac actctgcaca ttctgcgcat
     2161 gcaataccgt catcacgcgc aatcaccaac gtgaaatcgg ctacagggaa ttgttgctga
     2221 aggaatggag tctctatcgc gatagagtcc cggggatgcg cgaacgctcg ttgctcggca
     2281 ttcacctggg cggcggcaca ccgacatttt tcgcgcccga gaatctgcgg caaattctcg
     2341 aaccgatttt ggcggaaacg acgatcgatc cggatcggtt tgaagcgtca gtggaagtcc
     2401 atcccgggca caccacgcgg gagcatctga agacgctgcg cgagcttggt ttcacacgca
     2461 tctcgatcgg cgtgcaggac ttcgacccgg aagtgcagcg catcgtaaat cgccatcagc
     2521 cgtacgaagt gacgaagacc tgcacggacg tagcacgtga actcggctac acgtcagtca
     2581 actacgattt gatttacggc ctgccgaaac aaaggatcga gcggttctct gagagtgtag
     2641 acaagacgat cgatttgcgt cccgatcgaa tcgcgctcta cagcttcgcg ctcgtaccct
     2701 ggattaagcc cgcgcagcga agctataccg acgaggacat ccccagggcc gctgaaaaac
     2761 gagcgcttta cgagatggcg cgcgaaaaac tccaggctgc cggttacgcc gaaattggca
     2821 tggatcactt cgccctgccg cacgacggca tggcgcaagc tcaacgcgaa ggcactctgc
     2881 atcgcaactt tcagggctac acggagactc gcacgaacgt gctgctgggc ctcggcgtaa
     2941 gcgcgatttc ggaagcgccg acttgttttc atcaaaacga aaaagccttt ccggtttacg
     3001 agcggcgcgt ctcgcagggc gagattccta cattccgtgg acatttgctt tctgaagaag
     3061 accgagaact gcgcgagcag attttagaat tcatgactcg ctttgaagtc gaactgcgag
     3121 aacgacagcc tgaggatgca aagcagtttc tgtcatctct catcaacgac gggctggttg
     3181 acgttcaggg caaccggctt acgctcaccg agcaagggcg gccatttctc cgcaacgcgt
     3241 gcatgttttt cgattatcgc ctgcgacggc aacaaccaca ggcacgcact ttttcgcagg
     3301 cgctctgagg actggagcgc aagcgtctcg cttgcagagt tttcaccaca gaggacaaag
     3361 agaagaacga catgcaaagc gcaaagaggc aagtgccagg ggcgttcggt cagcattacc
     3421 cgctctgcgc caggctcttt ccccttagct ctttgccttc tcttctctgt gtcctctctg
     3481 gtttaaatcc cttcaaacct tgactcgcaa acctatcact gttgtcggcg caggattttc
     3541 cgggctgact actgcttatc tcctcacgaa agcagaccgc aaagtccgca tcattgaaaa
     3601 gaccgcgcgc gccggcgggc tgattcgcac cactcgcacc gaacacggcc tggtcgaaac
     3661 cgccgccaac ggcatgctga actcggcgcg actggaaacg atgtccgaag acatcggcgt
     3721 gccggtcttg ccgacgcgtc ctgacggccg aaagcgattc atctatcgcg acaagccacg
     3781 acagttgccc ttgagcctgg cggaagtgtt gcggattcct gttgggttga tcgccaacgc
     3841 tgcgaacctt cgtccacaac cgttcgagac gattgccgag tggggcgcgc gggtacctgg
     3901 caaaggcgca actgaattct tgttgggtcc ggcactcggc ggaatttacg caggcgatcc
     3961 gaagcgtttg agcgccagac tgatttttgg tcgcgctaac ctgcccgacc atattcaaac
     4021 gtatcgtccg aagaaagcca gggtgcgggg cacagtcgcg ccgccaaacg gaatgcagca
     4081 attgatcgat ggcctcgttg attacctaag gaaacgcgag gttgaaatgc acttcgaaac
     4141 agacgcgcgg cctgatacga acgagccaac tattgtttgt ctgtcggcga gcgcagcggc
     4201 ggaatacctc gcgaatgcct cgcccgccct ttcgcaggag ctcgcgcgag tcgaaatgct
     4261 ttcgctattg acggccacct gcttcttcga caaggaagcg
//
LOCUS       DATDBY010000652         2953 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1710052, whole genome shotgun sequence.
ACCESSION   DATDBY010000652 DATDBY010000000
VERSION     DATDBY010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2953
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1710052"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1373)
                     /locus_tag="VIT19_12255"
     CDS             complement(<1..1373)
                     /locus_tag="VIT19_12255"
                     /inference="COORDINATES: protein motif:HMM:TIGR00813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HEY5839802.1"
                     /translation="MKALDLAIIFGYLIGIVLFGAWFGRKQKTTRDYFLGDRSVPWWA
                     VAFSIVATETSTITFISVPGIAFSRGGNYQFLQLVFGYMLGRIVIAILFIPSYFRGEL
                     LTVYQLLDRRFGGKIKMLAASLFVVMRNIADGIRLLLTAIVLAAVYTSFQPAANAETI
                     VVASIILIGVAMIVFTYFGGMEAVIWVEVVQLGIYIVGALAAAIILTQSIDGGLSGAM
                     ALGSQFNKFSLFDFSFDMTKTFTFWAGLIGGCFLTMSTHGTDQYLVQRYLCTDRPRRA
                     ATALLTSGAIVLAQFIGFLFIGVLLFAFYHPHTDPGYATAAATAFPFTGGDRVFPDFI
                     TRHLPTGLSGLVVAAIFAAAMSSSLNSIAATSVNDLYRPFRQKLSDAHYLKVSHWLTL
                     LWGVVQIGVALLVRNQNRSALDQALSVASLINGPVLGVFLVGVFLKRVSEPPALIGMV
                     ASMAAMI"
     gene            complement(1494..2444)
                     /gene="murQ"
                     /locus_tag="VIT19_12260"
     CDS             complement(1494..2444)
                     /gene="murQ"
                     /locus_tag="VIT19_12260"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: protein motif:HMM:NF003915.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HEY5839803.1"
                     /translation="MPSDSSATLPITEQENPRSANLSSLSSLEIVEVMNVEDARVASA
                     VNAVLPQIAEAVERIVERLRKGGRLFYIGTGTSGRLGVLDAAECPPTFGVSPELVQAI
                     IAGGYEACYRAVEASEDDAAAGARDLQTRGFTTDDALVGIAASGRTPYTVGAVEYARE
                     IRAFTAAITCVPDSAITKAAEVAIVPVVGPEVVAGSTRLKAGTAQKMVLNMLSTAAMV
                     RLGYVTGNRMTNVLTRNVKLRARAVRILTAEGGIDEASASEVLDAAEGDLPVAIVMAK
                     SQSGQARAKAALEAADGVIARALELIKSEARSEPPAVAGG"
     gene            complement(2566..>2953)
                     /locus_tag="VIT19_12265"
     CDS             complement(2566..>2953)
                     /locus_tag="VIT19_12265"
                     /inference="COORDINATES: protein motif:HMM:NF013986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HEY5839804.1"
                     /translation="RVENADDLSTAIYSPTMTNDRLAGFAREVVRAARAGDAVAVEIL
                     EDAGRELAAAAIAVIKKLRMEKDEFRVACVGGVYGAGDLLLSAMQEQIKSVAKRAYLS
                     QPLFPPVIAAARIAHAHLRDEYALAG"
BASE COUNT          684 a          882 c          817 g          570 t
ORIGIN      
        1 tagatcatgg cggccatgct cgccaccatg ccgatgagcg cgggtggttc gctgactcgt
       61 ttcagaaaca cgcccacgag aaacacaccc aacaccggac cgttaattag cgacgccacg
      121 gacagcgctt gatcaagtgc cgatcgattt tgattgcgca ccagcaacgc cacgccgatt
      181 tggactacgc cccagagcag cgtcagccag tgcgagactt tcaagtaatg cgcgtcgctg
      241 agtttttgtc gaaacggccg gtaaagatcg ttcacgctgg tcgccgcgat ggaattcagc
      301 gaagacgaca tggcggcggc gaagatcgcc gcgaccacca gacccgacaa tccggtcggc
      361 aaatgacgag tgataaaatc gggaaaaact cgatcgccgc ccgtgaacgg aaacgcggtc
      421 gcggccgcgg tggcgtaacc cggatcggtg tgtggatgat aaaaagcaaa cagcagcacg
      481 ccgatgaaaa gaaatccgat gaactgggcc aggacgatcg cgccgcttgt taacagtgcc
      541 gtcgccgcac gccgcggccg atcggtgcag agatagcgct gcaccaggta ctgatcggtt
      601 ccgtgcgtac tcatcgtcag aaaacatcca ccgattaagc ctgcccagaa cgtgaacgtc
      661 ttggtcatgt cgaacgaaaa atcgaacagc gaaaacttgt tgaattgcga gcccagggcc
      721 atcgcccctg acaatccgcc gtcgatcgat tgcgtaagaa tgattgccgc tgccagcgcg
      781 cccactatgt agattcccag ttgcacgacc tcgacccaga tgaccgcttc cattccgccg
      841 aaataggtga agacgatcat cgccacgccg atcaaaataa tggaggcaac cacaatcgtt
      901 tccgcgttag cggccggttg aaacgacgta tagacggccg cgagaacgat cgcggtcaat
      961 aacagacgaa tcccatcggc gatgtttcgc atcactacga acagcgacgc cgcgagcatc
     1021 ttgatctttc cgccgaaccg tcgatcgagc agttgataaa ccgtcagcaa ctcgccgcga
     1081 aagtacgaag ggatgaacag gatcgcgatg acgatgcgac ccaacatgta cccgaaaaca
     1141 agttgcagaa actggtagtt gccgccgcgc gaaaaggcga tgcccggaac cgaaatgaaa
     1201 gtgattgtgg aagtttcggt agcgacgatc gaaaacgcga ctgcccacca gggcacggat
     1261 cgatcgccaa gaaagtaatc gcgcgtcgtc ttctgtttgc gtccaaacca cgccccaaac
     1321 aggacgatgc cgattaggta gccaaagatg attgcgagat caagggcttt catgctcggt
     1381 tctaaagata ttgtcggaac cgcctgcgcc gggttccccg cgcgagcatc tcgcgtgggg
     1441 tggccgttag cgggcggtca aatctaacct aaagcaatgt ttacccgcac cgatcaaccg
     1501 cccgctaccg caggcggttc tgaccgcgct tcagatttaa tcagttcgag tgcgcgggca
     1561 ataactccgt ccgcggcttc aagggctgcc ttcgcacgag cctgaccgga ctgcgattta
     1621 gccatgacga tcgccaccgg caagtcgcct tcggccgcat cgagaacttc actggctgac
     1681 gcttcgtcga tgccgccttc ggccgtcagg attctcaccg cccgcgcgcg cagcttcacg
     1741 ttgcgcgtca gcacattagt catgcgattg ccggtgacat agccaagccg gaccatcgcg
     1801 gcggtggaaa gcatattcaa aaccatcttt tgtgccgtgc cggcttttaa gcgcgtcgag
     1861 ccggcgacaa cttcaggtcc gacgaccggc acgatcgcga cttccgcagc cttcgtaatc
     1921 gcggaatccg gcacgcaggt tatggcggcg gtgaaggctc tgatttcgcg cgcgtactca
     1981 accgcgccga cagtgtaagg tgtccggccc gaagctgcta ttccaactaa ggcgtcgtcc
     2041 gtggtgaaac cgcgcgtttg taaatcgcgc gcacccgctg cggcgtcatc ttctgaagct
     2101 tcgacggcgc gataacacgc ttcataccca ccggcgatga tggcttgaac tagttcgggc
     2161 gagacaccga atgtaggcgg acactcagcc gcgtccagca cacccaggcg gcctgacgtt
     2221 ccggttccga tgtagaacaa gcgtccgcct tttcgcaagc gctcgacaat tctctccacc
     2281 gcttcggcga tctgcggcaa cactgcatta acggcagacg cgacgcgcgc gtcttctacg
     2341 ttcatcactt caacgatttc cagtgatgaa agcgaactga gattcgcgct gcgcggattt
     2401 tcctgttcag tgattggaag tgtcgcggag ctatcggagg gcatcttggc aagtttcaag
     2461 tttcaggttg caagtttcaa gtttgaattc taattccagg cgaggagatg tacgaccaga
     2521 cacgcgaact tgaaacctgg aacttggaac ttgaaacggt ttggcctacc cggccagggc
     2581 gtactcgtcg cgcaggtgcg catgcgcgat acgcgcagcg gcaatcactg gcggaaataa
     2641 gggctgcgac aggtaagcgc gtttggcaac gcttttgatt tgttcctgca tagcgctgag
     2701 caacaaatca cccgcgccat aaactccgcc cacgcatgcg acgcgaaact cgtctttttc
     2761 cattcgcaac ttcttgatca cggcaatcgc ggccgcggcg agttccctgc ccgcgtcttc
     2821 aagaatctca accgccacag catcgccggc tcgcgccgcg cgcacgactt cgcgcgcaaa
     2881 gcccgccaga cgatcgttcg tcatcgtcgg cgaatagatt gcagtagaca agtcgtctgc
     2941 gttttccact ctg
//
LOCUS       DATDBY010000653         2807 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_54646, whole genome shotgun sequence.
ACCESSION   DATDBY010000653 DATDBY010000000
VERSION     DATDBY010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54646"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..1022
                     /gene="ispH"
                     /locus_tag="VIT19_12270"
     CDS             150..1022
                     /gene="ispH"
                     /locus_tag="VIT19_12270"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: protein motif:HMM:NF002187.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0015968 - stringent response [Evidence
                     IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEY5839805.1"
                     /translation="MEVLLANEYGFCFGVERAVEMVEDALGVGAPVRTLGPLIHNTQE
                     MQRLECEGVETIQDPDQVKADEIAVIRAHGVTPQVQAELERRAAQVVDATCPFVTRVQ
                     RLAERAAKGGRHVIVVGNPDHPEMIGVVGYAPDNTYVVRDAAEVAALPPLHAPLVVSQ
                     TTLKLKTFLEVAEAVKAKADAEPEVVNTICSATRDRQDAARALAGLVDVFYIIGGKHS
                     SNSIKLLGVCEEQCVKSFLIETQDEIDPADLQGAKRVGVTAGASTPNWLIDQVVKRLR
                     DFGSHRNGNGAGVN"
     gene            1139..2479
                     /locus_tag="VIT19_12275"
     CDS             1139..2479
                     /locus_tag="VIT19_12275"
                     /inference="COORDINATES: protein motif:HMM:NF025761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEY5839806.1"
                     /translation="MLVPLLKELDEHILRDPALVPALFDRLTARQRELGLVFGDRPTC
                     PFLRPHIISRSQYDQVARAAQTVAAAVEKFVAHALVDDELFATLGLTARESQMARIDP
                     GYSRLCVSSRLDAYLSGDGFQFLEYNAETPAGVGDQVQLEKVLFEFEHVKALLDGHAH
                     WRPEPHKRLLSALLDAYRDWGGKEERPHIAIVDWKGVPTESEFLILKEYFAVEGYQTV
                     IADPGDLTYSGGRLKFGDFPIDIVYKRVVIHEFLDRCDGDHPLARAYADGRVCVANSF
                     RTKIAHKKAVFAILSDPNYAELFTPHEIETFHRHVPWTRRLARGRTTFENAERDLMDV
                     LRVERERLVLKPNDDYGGHGVVIGWETSKDDWEQAISLALNRPYVVQERVPLRKTAIP
                     SFAGGVQLEEMFIDFNPFLFHNEVEGALIRLSSSSLLNVTSGGGQTALLVLEGM"
     gene            2481..>2807
                     /locus_tag="VIT19_12280"
     CDS             2481..>2807
                     /locus_tag="VIT19_12280"
                     /inference="COORDINATES: protein motif:HMM:NF016152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEY5839807.1"
                     /translation="MNSESVRAHCLSFPHATENVQWGNDLVFKIAGKMFAVMVLEPPA
                     KYVLSFKCTEEKFNELTEQDGIDPAPYMARNKWAALERFDVLSDRELKELLRNSYQLV
                     FDKLPKK"
BASE COUNT          571 a          791 c          837 g          608 t
ORIGIN      
        1 tccccgggtt acgctcgctt cgctcgcaca agcaccccac gcgggatgcc cgcgcgggga
       61 ccccgctccg gggctaccat ctgtcgccgc tccgcggctt gttgaccctc accttcggag
      121 ccgtctccca ctgtgctagg atttacccaa tggaagttct cttagcaaac gaatacggat
      181 tttgttttgg cgtcgaacgc gccgtggaaa tggttgaaga cgcgctcgga gtgggcgcgc
      241 cggtgcgcac gcttgggccg ctgattcaca acacgcagga aatgcagcgg ttagagtgcg
      301 aaggtgtcga gacgattcag gatcccgatc aagtcaaagc tgacgaaatt gcggtgattc
      361 gcgcgcatgg cgtgacgccg caggtgcagg ccgaactcga aagacgcgcg gcgcaggttg
      421 ttgacgcgac ttgtccgttt gtgactcggg tgcagcgttt ggcagagcgc gccgccaagg
      481 gcgggcggca cgtcatcgtc gtgggaaatc cggatcatcc ggagatgatt ggcgtcgtag
      541 gttacgcgcc ggacaacacg tacgtggttc gcgatgcggc tgaagttgcg gctttgccgc
      601 cattgcacgc gccgttggtt gtttcgcaaa cgacgctgaa gctcaagaca tttctcgaag
      661 ttgctgaagc cgtcaaagca aaagccgatg ccgagccgga ggtcgtcaac accatttgtt
      721 cagccacgcg tgatcgtcag gacgccgcgc gcgccctcgc cggactggtg gacgtcttct
      781 acatcatcgg tggcaagcac tcttcaaaca gcatcaagct gctcggcgtc tgcgaagagc
      841 aatgcgtgaa gagtttcctc atcgaaaccc aggacgagat cgatcccgcc gacttgcaag
      901 gcgcgaaacg cgtcggtgtc acggcgggcg catccactcc gaactggctc atcgatcaag
      961 tggtaaagcg cctgcgcgac ttcggcagcc acagaaacgg caacggtgct ggtgttaact
     1021 aaagcacgtc cagcgtgtta atcgaaaagc gatttttacc ggcgggctga tgcccgccaa
     1081 ctcgtttttg gtggaattgc cagcggctat tcgtctccag ccccgggttg cctggtcaat
     1141 gctcgtcccg ctgctcaaag aactcgacga acacatcctc cgggatcccg cgttggttcc
     1201 cgcgctcttc gatcgattga ccgcgcgcca gcgtgaactg ggcctggtct ttggcgatcg
     1261 tcccacctgt ccttttcttc ggccacacat catttctcgc tcgcagtacg accaggtggc
     1321 gcgcgcggcg caaactgtcg cggcggcagt tgagaagttc gtggcgcacg ctttggttga
     1381 tgacgagttg ttcgcgaccc tcggtttgac agcgcgtgag tcgcaaatgg cgcgcatcga
     1441 tccgggctat tcgcggcttt gcgtttcgag ccggctcgac gcgtatctgt caggcgacgg
     1501 ctttcaattt ctcgaataca acgctgagac gccggccggg gtaggcgatc aggtgcagct
     1561 tgaaaaggtg ctgttcgaat tcgaacacgt gaaagctctg ctggacggtc atgctcattg
     1621 gcggcccgaa ccgcacaagc gtttgttgag cgccttactt gatgcctatc gcgactgggg
     1681 cggcaaagag gagcgtccgc acattgcgat agttgactgg aagggcgtac cgacagagag
     1741 cgaattcctc attctcaaag agtatttcgc ggtcgagggc tatcagactg tcattgctga
     1801 tccgggtgat cttacttaca gcggcggtcg cctgaaattc ggcgactttc ctatcgacat
     1861 cgtttacaaa cgcgtcgtca ttcacgaatt cctggatcgc tgcgatgggg atcatccgct
     1921 ggctcgcgct tacgccgatg gacgagtgtg tgtggcaaat tcatttcgca cgaaaatcgc
     1981 ccacaagaag gcggtgttcg cgattctcag cgatccgaac tacgccgaac ttttcacgcc
     2041 gcatgaaatc gaaacgtttc accgtcatgt tccctggacc cggcggctgg cccgcggccg
     2101 gacgacattt gaaaacgctg agcgagactt aatggatgtg cttcgcgtcg agcgtgagcg
     2161 gctggtgctg aaaccaaatg acgactacgg cgggcacggt gtcgttatcg gctgggagac
     2221 ttcgaaagat gattgggagc aagcgatttc tttggcgctc aatcgaccgt acgtggtgca
     2281 ggagcgtgtg ccgctccgca aaaccgccat tccatcgttc gccggcggcg tgcagctcga
     2341 agaaatgttt attgacttca acccgtttct atttcataac gaagtcgaag gtgctttgat
     2401 tcgcttgtcg tcgtcgtcgc tactcaacgt cacctcaggc ggcggtcaga ccgccttgct
     2461 tgtcctggag ggaatgtagc ttgaactctg aatccgttcg cgcccactgc ctgtcgttcc
     2521 cgcacgcgac ggaaaacgtc caatggggca acgacctcgt ttttaagatt gccgggaaga
     2581 tgttcgcggt gatggtgctc gagccaccag cgaaatacgt gctgtcgttc aagtgcaccg
     2641 aagagaagtt caacgagctt accgagcagg acggaatcga tccagcgcct tacatggccc
     2701 ggaacaaatg ggcggcgctg gaacgatttg atgtgttaag cgatcgcgaa ctgaaggaac
     2761 tgctgcgaaa ctcctaccaa ctcgtctttg acaagctgcc aaagaag
//
LOCUS       DATDBY010000654         3536 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1512534, whole genome shotgun sequence.
ACCESSION   DATDBY010000654 DATDBY010000000
VERSION     DATDBY010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3536
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1512534"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..816
                     /locus_tag="VIT19_12285"
     CDS             <1..816
                     /locus_tag="VIT19_12285"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY5839808.1"
                     /translation="NRFVYLSYGYTTNGEFVRVVRYRETPNGFTDRKIILENIPSAQF
                     HAGCRLRFGPDGKLYITTGDATDRNLAQQLNSVAGKILRLNDDGTIPSDNPFVGRSDA
                     RPEIFAYGSRNAQGIDFQPGTNLLFETEHGPSGFDGPGGGDEVNIIDRGKNYGWPVIH
                     HRQTRDGMEAPLLEYTPACAPASGMFYRGSQLPQFKGNFFFGCLRGTRIIRVVLDGRR
                     VVSEENLLEGKYGRIRDIAEGPDGFIYFSTSNRDGRGKPASDDDRIMRLIPVK"
     gene            complement(884..1537)
                     /locus_tag="VIT19_12290"
     CDS             complement(884..1537)
                     /locus_tag="VIT19_12290"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5839809.1"
                     /translation="MAEYVLTATKTEARAGSFYDRIAGLYDFTFKINGYGRSLDQYFD
                     EHPLPVFPGSRVLDAGCGTGTLTLAMLRNLQVPVKLTALDLSASSMATAKKYVSKQKH
                     REQKVEFMQGNILSLPFPDKSFDLIVTSGVLEYVPLDEGFGELARVLTPGGYFLNLPM
                     RPTVATRFLELLFRFKAHPPAELSETTNRHFKVVSHYHFPRFQIIGWSKTAVLGKKI"
     gene            1746..2663
                     /locus_tag="VIT19_12295"
     CDS             1746..2663
                     /locus_tag="VIT19_12295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839810.1"
                     /translation="MRKRVLLGLAVGLSCLFLLAGAAIEYGSRSVLAGYIATGRAEVA
                     VEPVAEVNGFSVEVLIDGRRTNEYAARGRRYIEALERAEYELRIHNPTGTRVAVALAV
                     DGMNTIDARHSSAWEARKWVIEPYGTIHVRGWQMSADNARRFYFTTERDSYGAKIGQT
                     QNLGVISAVFFRERRPVTVMPVTPGGREERPTYKRGDADRTENSPAESSPSAGANRDA
                     AKPRSTTPYPPPDDESAATGIGRNVQNGVTWIKMDLDQRPVAEVTIRYEYREALVRLG
                     ILPRGYPRPDVLNRRERAEGFDSKYCPQP"
     gene            complement(2726..>3536)
                     /locus_tag="VIT19_12300"
     CDS             complement(2726..>3536)
                     /locus_tag="VIT19_12300"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEY5839811.1"
                     /translation="RLRVDIGAKDWPNAVTTADDLLRSRLAGSNTTTDEVLYLKAHAL
                     DSAGRRDDAIRTYLLIPDGPNSYYGGLATARLRASGDAAANQMALERTAKVNASIARV
                     ANDFPAPYRFQLVKEASKRGLDPRLMLAIMKQESQFKPGARSPAAARGLLQLTIDAAN
                     RYGKRAGFTHVTEDMLYRPDVNIALGAEYLHELSRMFAGMPEAMAASYNGGEDNVARW
                     LARSNRNDDGVFASEVGFSESKNYVFKVMSNYRAYKQLYDAKLNPRASAKG"
BASE COUNT          735 a          979 c         1048 g          774 t
ORIGIN      
        1 aaccgatttg tttacctttc ttacgggtac accaccaacg gcgagttcgt acgggtagtt
       61 cgctatcgcg aaactccgaa cggtttcacc gatcgcaaaa tcattcttga gaacattccg
      121 tctgcacaat ttcacgccgg ctgtcgttta cgtttcggac ctgacggcaa gctgtacatc
      181 acgactggtg acgcaaccga tcgcaatctg gcccagcaac tgaattccgt tgccggaaag
      241 attctgcgtt tgaatgatga cggcacgatt ccgtccgaca atccttttgt gggccgcagc
      301 gatgcgcgac ccgaaatttt tgcctacgga agtcgcaacg cgcagggtat tgattttcaa
      361 cccggcacga atcttttgtt tgaaactgaa catggcccga gtggcttcga cggtccgggc
      421 ggcggtgacg aagtaaacat catcgaccgt ggcaagaact acggctggcc ggtgattcac
      481 catcgacaga cgcgtgacgg gatggaagcg cctttgctcg agtacacgcc ggcctgtgcg
      541 cccgccagcg gcatgttcta ccgcggctca cagctgccgc agttcaaagg gaattttttc
      601 tttggctgct tgcggggtac cagaatcatt cgcgtcgtgc tcgacggccg gcgcgttgtt
      661 agtgaagaga atctgctcga aggaaagtat ggccgcattc gcgatatcgc tgagggaccg
      721 gacgggttca tttacttctc gacttctaat cgtgatgggc ggggaaagcc tgcaagtgat
      781 gatgaccgaa tcatgcgact gattccggtg aagtagcacc tgctcggtac gcacgcctct
      841 ggcgtgctta tttgagaagt cggcacgcca gaggcgcgta cctttagatc ttcttcccga
      901 gaacggcagt cttactccag ccaataatct gaaatcttgg aaagtgatag tggctgacga
      961 ctttgaagtg tcgattcgtt gtctcagaaa gttccgcggg cgggtgtgcc ttgaatctaa
     1021 acaatagttc gaggaagcgg gtcgcgaccg ttgggcgcat cggaaggttc agaaaataac
     1081 cgcccggggt gagcacgcgc gcgagttcgc caaagccctc atcgagcggc acgtattcca
     1141 gcacgccact cgtcacaatc aagtcaaacg atttatccgg aaaaggcagc gacagaatgt
     1201 tgccttgcat gaactctact ttttgttcgc gatgcttttg cttgctcacg tactttttcg
     1261 ccgtcgccat cgatgaggcc gaaaggtcaa gcgccgtcag cttcacggga acctggaggt
     1321 tccggagcat cgccagcgtc agtgtcccgg tgccgcatcc cgcgtccaga acgcgcgagc
     1381 ccggaaacac cggcagtgga tgctcgtcga aatattgatc gagcgaccgg ccatagccat
     1441 taatcttgaa cgtgaagtcg tacaatcccg cgatgcggtc gtaaaacgat ccggcacggg
     1501 cttcggtttt ggtcgctgtc agaacgtatt ccgccattta tgaaccctca tgctggcgcg
     1561 caatcaaact gcgcgcggct tagctggtat gagaaccgcg ccattctagc ctgctgccgc
     1621 cgattttcca acacgatttc caaacattct gctcgtcttg ccgcaatttc cgcgcaagta
     1681 ggtgaagttc ggcccgttct gaccatgggt aactccaatt tctcgccgct aaggagaaga
     1741 aaaacatgcg aaagagagtt ttgttgggct tggcagtggg cttgagctgt ctgtttcttt
     1801 tggctggtgc agccatcgaa tacggttccc ggagcgttct ggctggttac attgcgaccg
     1861 gtcgggctga agtagcggtc gaaccggtcg cggaagtgaa tggtttttca gttgaagtgc
     1921 ttatcgacgg ccgccggacg aacgaatacg cggcgcgcgg tcgccgttac attgaggcgc
     1981 tggagagggc cgaatacgaa ctgcgcattc acaacccgac ggggactcgg gtggcggtcg
     2041 ctctggcggt tgacggcatg aacacaattg acgcgcggca ctcgagcgcg tgggaagcgc
     2101 gtaagtgggt gattgagccg tacggaacca ttcacgtgcg cgggtggcag atgagcgcgg
     2161 ataacgcgcg ccggttctat ttcacgactg agcgcgattc gtacggcgct aagatcggcc
     2221 agacacagaa cctcggcgtg atatcggcgg tgttcttccg cgaacggcga ccggtcacgg
     2281 tcatgccggt tacaccgggc ggtcgcgaag aacggccgac ctacaaaaga ggtgatgcgg
     2341 atcgaactga aaactcgcct gccgagtcgt cgccgtcagc tggcgcgaat cgcgacgcag
     2401 cgaagcctcg aagcacgaca ccatacccgc cgcctgatga cgagtccgcg gccacgggaa
     2461 ttggccggaa cgttcagaac ggagtgacct ggatcaaaat ggatctcgat cagcggccgg
     2521 tcgccgaagt cacaattcgc tatgaatatc gtgaggcgct ggtgcgtttg ggaattcttc
     2581 cgcgtggtta tccccgaccg gatgttttga atcgtcgcga gcgggcggag gggtttgact
     2641 cgaagtactg tccgcagcct taagcggcca agggcaaaga gcagagggca aagcgaaaca
     2701 attggcggcg cttggcactc tgcgcttagc cctttgcaga ggcccgcgga ttcagcttcg
     2761 cgtcgtacag ctgtttgtac gcgcgatagt tgctcattac tttaaagacg tagttcttag
     2821 attcgctgaa gccgacttcc gaagcgaaca cgccgtcgtc gtttcggttt gagcgtgcga
     2881 gccagcgggc gacattgtct tccccgccgt tgtatgacgc ggccatcgcc tccggcatcc
     2941 ctgcgaacat gcgtgaaagc tcgtgaaggt actccgctcc gagggcgatg tttacatcag
     3001 gtcgatagag catgtcctca gtcacgtgcg taaagccggc tcgtttgccg tacctgttcg
     3061 ccgcgtcaat cgtcagttgt agcaggccgc gagcggccgc cggcgaccgc gcaccaggtt
     3121 tgaactgact ttcctgcttc atgattgcga gcattagacg tggatcgaga ccgcgcttgc
     3181 tggcttcttt cacgagttgg aaacggtatg gagccggaaa gtcgttcgca acccgggcaa
     3241 tcgacgcgtt tactttcgcc gtgcgctcca gtgccatctg gttcgcggct gcatcgcctg
     3301 acgcccgcaa ccgcgccgtc gccaatccac cgtagtacga gtttgggccg tccggaatca
     3361 gcaaataagt gcggatggca tcgtcccggc gaccggcact gtccagagcg tgagctttca
     3421 gatagagcac ctcgtcagtg gtcgtgttgg atccagccaa ccgcgaccgc aacaagtcgt
     3481 ctgcagtggt gaccgcgttc ggccaatctt tggcaccgat gtccacgcgc agtcgc
//
LOCUS       DATDBY010000655         3275 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2735413, whole genome shotgun sequence.
ACCESSION   DATDBY010000655 DATDBY010000000
VERSION     DATDBY010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3275
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2735413"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1466)
                     /locus_tag="VIT19_12305"
     CDS             complement(<1..1466)
                     /locus_tag="VIT19_12305"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5839812.1"
                     /translation="MPSVSISKLFLSLLAITFLLVVAFSIRFTFKFAGFSAEASQLAE
                     NLHDTSALSLELNNQLNGQINLVYQQFEHLDQDFSARFSAMNFSLGEKQTRYLKLDIG
                     SAERLTVESIKSLQSELGVEAQQIYFQLQNGNRSGAVLRLRRMQNLQEKIDAELARLN
                     ALQTGKLRRVQQQLDESIRTTNRAILGLGAGLLLSLMVFTVLLRRRVLRPLALIFEAT
                     NKVRDGNFSARAQIDRRDELGQLAKGFNFMAESLAESYASLESKVEERTRQLQEVQSQ
                     LVQAEKMSAVGRMLSGVAHELNNPLTVIMGHTDLTRRRLVASGASEKEITLMTMLHEQ
                     GDRCRKIVANLLQFARQEKPHLERVRLSDIVEQALQLREYELTTRNIKLVREYDPTNP
                     FFAADPNKIVQVVLNLINNAHDAIRDAGRPGTIRVRTFADQDTVRLEFLDNGTGLREP
                     ERVFDPFYTTKEVGQGTGLGLSVCYGIVEEHNGSITAE"
     gene            1801..2271
                     /locus_tag="VIT19_12310"
     CDS             1801..2271
                     /locus_tag="VIT19_12310"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5839813.1"
                     /translation="MLINLLKLPPLQPLIDEMRAAGVNIRRAQPFELTPVRQFIEHNF
                     SVAWADEVSVGFPHKPVTVYIATRDGHVIGFAGYECTRKAFFGPTGVGESERGRGVGK
                     ALLIAALWGLRELGYVYGIIGHAGPIDFYQEAVGATVIPDSDPGIYEDLLMQDL"
     gene            2313..2702
                     /locus_tag="VIT19_12315"
     CDS             2313..2702
                     /locus_tag="VIT19_12315"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="clan AA aspartic protease"
                     /protein_id="HEY5839814.1"
                     /translation="MGLINGRLILKNPRLLNLAPVEVQALVDSGAIHLCIPEHVQLQL
                     ELEPIDTKEVTLADGSRTRVPYVGPIELRFKNRVGFAGALVMGDQVLLGAIPMEDMDL
                     VIIPKTRTLDINPDNPNFASSIAKSAK"
     gene            complement(2769..>3275)
                     /locus_tag="VIT19_12320"
     CDS             complement(2769..>3275)
                     /locus_tag="VIT19_12320"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine dimethyltransferase family protein"
                     /protein_id="HEY5839815.1"
                     /translation="YNIGTAILQRLIEQRACITEMFLMLQREVADRITATTDSPERGY
                     LSVFVEAYCEAEKFFDVPARAFRPVPQVVSTVVRLRVRERSAADVRDESLLWQVVSAG
                     FAHPRKTILNNLREAPAPIQELLTKRGGASIVLCDAGIPPLRRAETLAIEEWAVLVNA
                     IIQPGECK"
BASE COUNT          755 a          904 c          879 g          737 t
ORIGIN      
        1 ttttcggcag tgatcgaccc gttgtgctcc tcaacgatcc cgtagcagac actcaggccg
       61 aggcccgtgc cctggccaac ctctttggtt gtgtagaacg gatcaaagac acgctccggt
      121 tcgcgcaagc ccgttccgtt gtcaagaaac tccaatcgga cagtatcctg atcggcaaac
      181 gtgcgcaccc gaatcgttcc cgggcgtccg gcatcgcgaa tggcatcgtg agcgttgtta
      241 atcagattga gcacgacttg aacgatcttg ttgggatcgg ccgcgaagaa tgggttcgtt
      301 ggatcgtatt ctcgaaccag cttgatgttg cgagttgtca attcgtattc acgcagttgt
      361 aaagcctgtt ccacgatgtc gcttaatctg acccgctcaa gatgcggctt ttcctggcga
      421 gcgaactgta gaagattcgc aactatcttt cggcaccggt cgccctgctc gtgaagcatc
      481 gtcatcaatg tgatctcctt ttcgcttgcg cctgacgcga ccaggcgccg gcgagtcaga
      541 tccgtatggc ccatgattac ggtcagtgga ttgttcagct cgtgcgccac tccactgagc
      601 atgcgcccga ccgccgacat cttctcggct tggaccaact ggctctgcac ttcctgaagt
      661 tggcgagtgc gctcttcgac cttgctctcg aggctggcgt aactctcggc cagcgattca
      721 gccatgaagt tgaacccctt ggccaactgg cccaattcat cccgtcggtc gatttgtgcg
      781 cgagccgaga aattcccatc tctgactttg ttcgttgcct cgaaaatcag ggccagtggt
      841 cgcaaaactc gacgccgcaa aagcaccgtg aaaaccatca gggagagcaa caatccggcg
      901 ccgagcccga gaatggcgcg gttagtcgtt ctgatgctct cgtccagctg ctgttgcacc
      961 cgacgcagct tgcccgtctg tagtgcgttc aaccgggcta gctcggcgtc gattttttcc
     1021 tggagattct gcatgcgccg gagacgcaac accgctccgc tgcgatttcc attctgcaat
     1081 tgaaaataaa tttgctgagc ctcaacacca agttccgatt gcaggctctt aatgctttca
     1141 accgtgagcc gctcagcaga accaatatcg agcttcaggt aacgagtctg tttttcacca
     1201 agtgagaaat tcatcgcgct aaatcgcgca gaaaaatcct ggtcgaggtg ctcgaattgc
     1261 tgatagacga ggttaatctg gccgttgagt tgattattca gttcgagact caacgccgaa
     1321 gtgtcgtgga ggttttccgc aagctgcgag gcctcagctg agaaaccagc gaacttgaag
     1381 gtgaatcgaa tcgaaaacgc gaccaccagc aaaaaagtaa ttgccagcaa actcaggaag
     1441 agcttcgaaa ttgaaactga aggcataggt gactgtgagg cgatctactc agacgttggc
     1501 ttccgaccaa ccgatgggaa ggcatgttcg agctccaatc gagactgcgc gaagcaggcc
     1561 ttaaacgagc gcacaatctc gggcacgaac tgtgcactaa atgtgccaaa gattcggagc
     1621 ccaaaaacct tggaagtcga atcacgagta tttgaatcgg gcaaaacgcc cgactcagac
     1681 cttttggagt tggggcgaaa cggtgcaatc agcgtgcgga accgctcgcg tatcccgtga
     1741 aaccagccag cgcgtgtcgc gcgacccatt cttctcagct aaactgaatt cgtgcccgac
     1801 atgttgataa atctgctgaa gctgccgccg cttcagcctt tgatcgacga gatgcgcgcg
     1861 gccggcgtca atattcgtcg ggcgcagccg ttcgagctca ccccagttcg acaattcatc
     1921 gaacacaatt tctcagtggc ctgggctgat gaagtgtccg tcggctttcc gcacaagcct
     1981 gtgacggttt acatcgcaac gcgcgacggg cacgtaattg gttttgcggg atacgaatgc
     2041 acgcgcaagg ctttcttcgg accgaccggc gtaggggaga gcgaacgcgg ccgcggcgtg
     2101 ggcaaagctt tattgattgc cgcgctgtgg ggcctgcgcg agctgggtta cgtttacgga
     2161 atcatcggtc acgcaggtcc gattgatttt taccaggaag ctgtcggcgc aactgtgatt
     2221 cctgatagcg atccgggaat ttacgaggac ttgctgatgc aagatttata gcgctgcatc
     2281 ctcgtggtcc ggcgtggtat ggtgttgccg atatgggact tataaacggc cgtttgattc
     2341 tcaagaaccc aaggctgctg aatctcgccc cggtcgaagt ccaagcgctc gtagattcag
     2401 gagcaatcca tctttgcatt cccgaacacg tgcaacttca acttgaactg gagccaatcg
     2461 atacaaagga agtaacgctg gctgatgggt caagaactcg agtgccttat gtcgggccga
     2521 ttgagttgcg gtttaaaaat cgcgtcgggt ttgctggtgc actagtaatg ggcgatcagg
     2581 tgttgctcgg tgccataccc atggaagata tggacttggt catcatcccc aagacacgca
     2641 cgctggacat aaatcctgac aaccccaact ttgcgtcatc gattgcaaag tcagcgaaat
     2701 aaataatagc cgtacaagtg tggcgtctaa acgctgaggt gagcagtagc ccgcctccaa
     2761 acgaacactc atttacattc accaggttga atgatcgcat tcacaagcac cgcccactcc
     2821 tcaatagcca aagtttccgc acgacgcaga ggcggaattc cggcatcgca caaaacgatg
     2881 ctcgcgccgc cgcgtttcgt aagcaactcc tgaatcggcg caggcgcctc gcgtaaatta
     2941 ttgagaatgg tcttgcgtgg atgcgcgaaa ccggcactca ccacttgcca caataacgat
     3001 tcatcccgca cgtctgcggc gctccgttcg cgaacccgaa gacgcaccac tgtgctcact
     3061 acctgcggga ccggacgaaa agcgcgtgcc ggcacgtcga agaatttctc cgcctcgcaa
     3121 tacgcttcaa caaaaacgga aagatagccg cgctcgggtg aatcggttgt cgcggtaatg
     3181 cgatcggcga cttcgcgttg cagcatcaga aacatttcag tgatgcaggc gcgttgttcg
     3241 attagtcgct gcagaatcgc cgtcccgatg ttgta
//
LOCUS       DATDBY010000656         7286 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_707993, whole genome shotgun sequence.
ACCESSION   DATDBY010000656 DATDBY010000000
VERSION     DATDBY010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 7286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7286
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_707993"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..618
                     /locus_tag="VIT19_12325"
     CDS             <1..618
                     /locus_tag="VIT19_12325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839816.1"
                     /translation="WLASLFAQRPALGYALAAALLLVIGVAGWFAVERMRGRVEPQRA
                     GTNGAPSPGQKQDDTGVVSRQPNQGTPSPESDNATPGVSQTPAREDQATRPAFATITL
                     VPGSLRDGASGANLFIPRGSTQLRLRLQLEEDNYRSYNAVISTPEGRNVWAGATRKDR
                     EKNAQFVTFTLPAALLARGDYIIELTGTTAGAAAAQYSFRVTRED"
     gene            881..3424
                     /locus_tag="VIT19_12330"
     CDS             881..3424
                     /locus_tag="VIT19_12330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839817.1"
                     /translation="MCTLKRLISCSIVAVVLAGTSLAQENRAPIDNPVEPVPATSGPV
                     VTATATSKRVRFVSPGTAVQLRVEVYNEAGQKVFDTELRGGNVLDWHLQDAAGQRLQT
                     GSYACVLTIKSLSGRLSQRVGTVTVNEEKTAISTAAAVPLSLAQQQTIGPVEGNAAFT
                     VLHESDTAAITAVTHDGTEGQVARTRGALSFRMGDFFSGRDKEQMRLTEDGKLGIGTN
                     NPQSTLDVAGTIRAERILIAKPKLGSFSQMSGADTAQAEAGGSIAMATGSGTQDQIAK
                     WIDNAGTLGDSGITETGGNVGIGTTTPGALLDVTNNTNHLKYSPATAKLTLTGPASNL
                     TVNPGLRLEFNSDPDAALSYFAYSHDNISQAYDAYWNGAAWVSSHLGANFAIYKNASQ
                     LTIGFNAGTPKGSTFPSFNTSTGVIFSNTGSMGVGGAPASAKLYVNGNVGIGTNNPTQ
                     ELDVAGDIKASGSLIGATGSVTGNLTVDTTTLNVDAANNRVGVGTLTPALPLDVIGPI
                     NSSTGYHIGVARVFHITGTENTFVGIGPGAFNSGSENSFFGSFAGVINTTGTQNSFFG
                     RNAGRYNTTGGSNSFFGRNAGEGNVTGIGNSFFGTDAGAANTASSNSFFGRAAGAANT
                     SGSDNSFFGKEAGLANVTGTNNAFFGRSAGKANAANLNSFFGANAGMANTTGTVNAFF
                     GYDAGLSNTDGSSNAFFGGSVGRYNTTGDDNTFIGSDAGQPNTIGSSNTFIGRSAGLA
                     NTIESNNTFVGANSNGAAGITNATAVGANAVVTQSDSLVLGNGVNVGIGPSAPAEKLH
                     VRGNIYISGGGPFVNNYNGLILKSPNGLTCAKLTIDNAGALVTTVIPCP"
     gene            3464..4066
                     /locus_tag="VIT19_12335"
     CDS             3464..4066
                     /locus_tag="VIT19_12335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839818.1"
                     /translation="MKRLILSLIGSATLFTMLTSAPPLAAQRRKVVVHPKRAVVRRPV
                     KHTKLVVRSGHPVKRTLPATVVVRPARKTVVVGAPLHFLPAVAWRKASVSLPSTERLV
                     WQDSEEVNRDEGWVDTNFGIDGSGNALFLQVAGDVELNFAEVAFANGNVQVLDFNEQT
                     HGDGTYKLLDFADGRHVKTVRILARSKSEDATLTVYLSKS"
     gene            4432..4695
                     /locus_tag="VIT19_12340"
     CDS             4432..4695
                     /locus_tag="VIT19_12340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839819.1"
                     /translation="MGEQDLITKVRLNMTKRPDGAEFFAAEGDAVAKLINGQPLPDEI
                     RKAITGPLFTTGGDFTTRSQVGNAGVELVRSATDSRYSLSFDF"
     gene            4763..5971
                     /locus_tag="VIT19_12345"
     CDS             4763..5971
                     /locus_tag="VIT19_12345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839820.1"
                     /translation="MKSRIILSLTFVLAFSINGFAQWTFRVGDTVEYRCNCFGKEWVR
                     AKVEAIEGNTIRVRYGNVRNQAATVAIASGDVRSVGGAKITTSGNQTDNKRAVVDNSI
                     ADAARLAADDKVRWAFRAEAADKYYRTVAQFAPSYDERYISGGSPNTPAEWQKAMSDL
                     AELDTLCKSKYPGITDSLIYLREGIIDYRYAQWCDIAAKRLTLEPKARARAAAYGAYV
                     PGADDLKRALEYEDNRVIDDIQLLMYEPEKWKAKHSVEMKAHFAKYGAEMPANFFDET
                     IKKGAELKAKIDQGAPGRSFRTSANRDAAVDSFIKGKFRAEYPGSQILASRLDYPNWV
                     KRESLSLAGSGTGYKLYKVEYNFYKRGWVLMKMPNRPFCQAREWIVGRGAKGLVAVST
                     SSQGTFMKCQ"
     gene            6062..7015
                     /locus_tag="VIT19_12350"
     CDS             6062..7015
                     /locus_tag="VIT19_12350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839821.1"
                     /translation="MKNFLAVGFACLALTACQPSGTNQNTAANANAATPESTTATAPK
                     DYSVKPPVFANSAPDTAEAVKFPFADFPKVGTTAKAGDYVLAPSYNWIKDAAEKGLDS
                     TRFIWYVQKMATPDKENSELQFLSERRKIPNPYVIAIPPKQTAKKGDIVLTWWQSGSG
                     MQRAIVVDDTDSSAPVVRYLDIDYNNPAKSRDGSTTIGKMDEKILPDTFFKLKDWDAG
                     TIITVQDGANLKKAHVIRVAGDRVLALENGKLQIYSKASCRPVPLVPNVKEGDRVKAP
                     RYGMNFASATVSSVDTRNGRVFVRFDGDNKDEAIAFGSVLK"
BASE COUNT         1671 a         2071 c         2139 g         1405 t
ORIGIN      
        1 tggcttgcgt cgcttttcgc ccagcgaccg gctctgggct acgcgctggc ggcggctttg
       61 ctcctggtga taggcgttgc cggctggttt gcagtcgaaa ggatgcgagg gcgggtcgag
      121 ccgcaacgtg cggggacgaa cggcgccccc tcgccgggac agaaacagga cgatactgga
      181 gtcgtctcgc gccaaccaaa ccaggggacg ccatcgccgg agtctgacaa cgcgacgccc
      241 ggagtttcac agacgcccgc gcgcgaggat caggccacgc gccccgcgtt tgcaacgatc
      301 acgctcgtgc ccggctcttt gcgcgacggc gcgtctggcg cgaacctctt cattccgcgc
      361 ggttccaccc aactgcgcct ccgcctgcaa ctcgaagaag acaattaccg cagttacaac
      421 gcagtcataa gtacacccga gggccgcaac gtttgggcag gcgccacgcg caaagatcgt
      481 gagaaaaacg cgcaattcgt caccttcacg cttccggccg ctttgctcgc ccgcggcgat
      541 tacattattg agctaaccgg aaccacggcc ggcgcagcag ccgcgcaata ctccttccgc
      601 gtcacccgcg aagactagct cgctacagcg cctaaaaagt taatgaatgg cggcgcggct
      661 gtgccgcctg atgtgcggag gcgctctgcg cttccgtccc acgcccgaaa aatttccacg
      721 taacattttg cgcgacacgg ccacttgctt tgtgcagagg caaagtcgct ccgcatcgcc
      781 gctaacttgc cggcggtaat ggaggctgtt gaactccaca catccgctga agcggaccaa
      841 cctgcgccca cgattttttc gggaaatgaa ggagatcaag atgtgcacac ttaagcgtct
      901 tattagctgc agtatcgttg cggttgtgct tgcgggcaca tctctagctc aggagaatcg
      961 cgcgccaatt gataacccgg tggaaccggt tccagctacg tcgggcccgg tggtaaccgc
     1021 cacggctacc tcgaagcgag tgcgctttgt gagtcccggc accgcggtgc aactccgtgt
     1081 ggaggtctac aacgaagccg ggcagaaagt ttttgacact gaactgcggg gcggcaacgt
     1141 gctggactgg cacttgcagg acgccgccgg ccaacgtttg cagacaggat cgtacgcctg
     1201 cgtgctgaca atcaagagct tgtcaggacg attgagccag cgggtgggga cggtgacggt
     1261 gaatgaggaa aagacggcga tatcgactgc tgccgcggtc ccactatcgc tggcccagca
     1321 acagaccatt ggcccggtgg aaggcaatgc tgcatttaca gttttgcacg agagtgacac
     1381 cgcagcgata actgctgtca cgcacgatgg cactgagggc caggtcgcgc gcacgcgcgg
     1441 ggcgctcagt ttccggatgg gagatttctt ctccgggaga gataaagagc agatgcgttt
     1501 gacggaagac gggaagctgg ggattggcac caacaacccg caatcgacct tggatgtggc
     1561 cggcacgatt cgggcggagc ggatactcat cgccaaaccc aagctgggca gcttctctca
     1621 gatgtcggga gcggacacag cgcaagccga ggctggaggt tcgatagcca tggccactgg
     1681 ttccggaact caagaccaga ttgcgaagtg gatcgacaat gccggcacgc tgggtgattc
     1741 aggcatcacg gaaaccggcg gcaatgtcgg catcggcacc accacccccg gggccttact
     1801 tgatgttacc aacaacacaa accatttaaa gtacagtccc gcgaccgcta aactgacctt
     1861 aaccggcccc gcctcgaact tgactgtaaa tcctggtctg cgtcttgaat tcaactctga
     1921 tcctgatgcc gccttatctt acttcgccta ttctcatgac aacatttccc aggcgtacga
     1981 tgcgtattgg aatggcgcag cttgggtttc ctctcacctt ggagccaact ttgctatcta
     2041 taagaacgcg agtcagttga cgattggttt caatgccggc acgccgaaag gaagcacctt
     2101 tccctccttc aacacgtcta cgggagtaat cttcagcaac actggaagca tgggggttgg
     2161 cggcgcgcct gccagcgcga agttgtatgt caacggcaac gtcggcatcg ggacgaacaa
     2221 ccccacacag gagctcgacg tggctggcga catcaaggcc agcggatctt tgatcggcgc
     2281 gacggggagc gtgacgggca acctgacggt ggacacgacg acgctcaacg tggacgcagc
     2341 gaacaaccgc gtcggcgtcg gcacgctgac gccggccctg ccactcgatg taatcggccc
     2401 gatcaattct tcgacgggtt accacatcgg cgtggcgcgt gtgttccaca tcacgggcac
     2461 ggaaaatact ttcgtcggga tcggcccagg ggcgtttaat tcaggcagtg agaactcctt
     2521 ttttgggtcc tttgccggcg tgatcaacac caccggcacg cagaattcct tcttcggcag
     2581 gaacgccggc aggtacaaca cgaccggcgg ctcgaactcc ttcttcggca ggaacgcggg
     2641 tgagggcaac gtgacgggca tcggcaactc tttcttcggc acggatgccg gcgccgccaa
     2701 cacggccagc agcaattcct tcttcgggag ggctgccggc gccgccaaca cgtcgggctc
     2761 ggacaactcc ttcttcggca aggaggctgg cttagccaac gtgacgggaa ccaacaacgc
     2821 tttcttcggg cgtagtgccg ggaaggcgaa tgccgccaac ctcaactcct tcttcggcgc
     2881 taatgccggg atggcgaaca ccacggggac cgtcaacgcc tttttcgggt acgacgccgg
     2941 cctgtctaac acggatggaa gctcgaacgc cttcttcggc ggcagcgtcg ggcggtataa
     3001 cacgacgggc gacgacaaca ccttcatcgg atcagatgcc ggtcagccaa acaccatcgg
     3061 cagctccaat acattcatcg ggcgtagcgc cgggctcgca aacaccatcg aaagcaacaa
     3121 caccttcgtc ggcgcgaact cgaacggcgc ggctgggata accaacgcga cggccgttgg
     3181 ggcgaacgcc gtggtcacgc aaagcgattc gctcgtcctg ggcaatggcg tcaatgtcgg
     3241 catcggtccc tccgcgcccg cagaaaagct gcacgtccgc ggcaacattt acatcagcgg
     3301 cggcggcccc ttcgtcaaca actacaacgg cctcatcctg aagtcaccca acggtctgac
     3361 gtgcgccaag ctgacgattg ataacgcggg cgcgctcgta acgaccgtca ttccctgccc
     3421 gtaggatatc gagcgtcttc ggttgaacga aaaggagcag aacatgaaga gattaatctt
     3481 aagtctaatc ggttcggcga ctctctttac gatgttgacc tctgcgccgc cgctggcggc
     3541 ccaacggcgc aaggtcgtgg tacacccgaa gcgcgcagtc gtccgtcgcc cggtgaaaca
     3601 cacaaagctt gtcgttcgca gcggccatcc cgttaagcga acgctgccgg cgacggttgt
     3661 cgtccggccc gcgcgcaaga cggtagtcgt cggagcgccg cttcatttcc tgccagccgt
     3721 tgcctggagg aaggccagcg tctcgctgcc ttcgaccgaa cggctcgtct ggcaggacag
     3781 cgaagaggtg aaccgcgatg agggatgggt ggataccaac ttcggtattg acggttccgg
     3841 caacgcactg tttcttcagg tcgcaggcga tgttgagctc aacttcgccg aagtggcgtt
     3901 cgcgaacggg aacgtccagg tcttggattt caatgagcag acgcacggcg acgggaccta
     3961 caagctgctg gactttgctg atggacggca cgtaaagacc gtgcgaatcc tggccaggtc
     4021 aaagtcagag gacgcgacgc tcacggttta tctgagcaag tcatagcgaa gtacctgggt
     4081 gtcagaaaag attgtgtacc gctttcacga agggagcttc tcgaaatgat caaagagcaa
     4141 agatgtgcaa cggtttcggg ccgactgatc ctcggcctgc tcgttctaac tgccgcgagt
     4201 ttgggttgca acatgttggg aggtggaggt cggaaggata gcgccgccga taggaagaac
     4261 tctaagggga ttcccgcaaa cacaatctgc cagatattgg ctcactccag ttttgaacaa
     4321 cgatctccct ataacggtca gaattgttca ggtggcacct atttcggcgc aagggacacg
     4381 cgaacggctt cgtacgagac cgatacgcgg ccctcttttt cttacctcgc gatgggtgaa
     4441 caagacctca tcaccaaggt tcgtctcaat atgacgaagc gccccgacgg cgccgagttt
     4501 tttgcggccg aaggcgatgc ggtagccaag ttgataaatg gccaacccct gccggatgaa
     4561 atcagaaagg cgatcacggg tcccttgttt acaacggggg gcgactttac caccaggtcg
     4621 caagttggta atgcgggagt cgaactagtg cggtcagcca ccgatagtag atacagtttg
     4681 agctttgact tctgaggcgt gccgccaacc aaccgcacca cttccatgac ggtgagaggt
     4741 ggcttcaagg aggaacattg ttatgaaaag ccgaattatt ctgtcgctaa cgttcgtttt
     4801 ggcattctct attaatggat ttgcacaatg gactttccgc gtcggcgata cggtcgaata
     4861 tagatgcaat tgtttcggaa aggaatgggt cagagcgaaa gtcgaggcca ttgaagggaa
     4921 caccattcgg gtgcgctacg gcaatgtcag aaatcaggcc gccaccgtgg cgatcgcgtc
     4981 aggtgatgtc cgctcggtcg gaggcgcgaa gattaccact agtgggaatc aaactgacaa
     5041 taaacgcgct gtagttgata acagtatcgc cgacgcggca aggctcgccg cggatgataa
     5101 ggtgcgatgg gctttcagag ctgaggccgc agataagtac tatcgaaccg ttgctcaatt
     5161 cgcgccgtct tacgacgagc gatatatctc gggcggttcg cccaatactc cagcagaatg
     5221 gcagaaagcg atgagcgacc tcgcggagct ggacacgctt tgtaagtcaa aatatccggg
     5281 cataaccgac agcctaatat acctgcgcga aggcatcatt gattaccgct atgcgcaatg
     5341 gtgcgatata gccgccaagc gattaactct ggagcctaaa gcgcgcgccc gtgcagccgc
     5401 ctacggggcg tacgttcccg gcgcggacga tctgaaacga gctctcgaat acgaggacaa
     5461 ccgcgttatc gatgatattc aattgctgat gtacgagccg gagaagtgga aggctaaaca
     5521 ttctgtagag atgaaggcac acttcgccaa atacggtgca gagatgccgg cgaacttttt
     5581 tgacgagaca ataaagaaag gagccgagct caaggcaaag atcgatcagg gcgcgccggg
     5641 acgctctttc aggacctcgg caaatcggga tgcggcggtg gatagcttta tcaagggcaa
     5701 gtttcgcgcg gagtatcccg gctcgcagat actggcgtcg cgactcgact atcccaactg
     5761 ggtaaaacgc gagagccttt cccttgctgg gagcggcacc ggctacaagc tctacaaggt
     5821 cgaatacaac ttctacaaac gcggctgggt actgatgaaa atgccaaatc gccccttttg
     5881 ccaagcccgg gagtggatcg tcgggcgcgg cgccaagggc ctggtcgccg tgagcacgag
     5941 cagccagggg acgtttatga agtgtcagta agtcacaagg tgcatggaac cgatgctgaa
     6001 acgtccctta tctatcgaag actattagcg aaacaaaatt aaccctcagg agggagatga
     6061 aatgaagaat tttcttgccg tcggtttcgc ctgcctggcg ttaacggctt gccagccgag
     6121 tgggacaaat caaaacacag ccgctaacgc aaacgccgcg acccccgaaa gtacgaccgc
     6181 caccgcgccg aaggattatt cggtgaagcc gccagtcttc gcgaactccg ccccggacac
     6241 ggccgaagct gttaagtttc ctttcgcgga ttttccgaaa gtaggaacca cggcgaaggc
     6301 cggcgactac gtgctcgcgc cgtcttacaa ctggatcaaa gacgcggccg agaaaggctt
     6361 ggattcgacg cgcttcatct ggtacgtcca gaagatggca actcccgata aggaaaactc
     6421 agaattgcag tttctctcgg aacgccgcaa gatcccgaat ccttacgtca tcgcgatccc
     6481 gccgaagcag accgcaaaga aaggcgacat cgtgttgacg tggtggcagt cgggttcggg
     6541 catgcagcgc gccatcgtgg ttgacgacac cgactcgagc gctcccgtgg tgcgttatct
     6601 cgacattgat tacaacaacc cggccaaatc tcgcgacggt tcgacgacga tcggcaagat
     6661 ggatgaaaag attttgccgg acaccttctt taagctgaaa gactgggacg cgggaacgat
     6721 cattactgtt caggacggcg ctaatctgaa aaaggcccac gtaattcgcg tggcgggtga
     6781 cagagtctta gcgttggaaa acggcaaatt gcagatctac tcgaaagcga gttgccggcc
     6841 tgtgccgctc gtgccgaatg taaaagaggg tgatcgtgta aaggcgcccc gatacgggat
     6901 gaattttgcg agtgcaaccg tttccagcgt cgatacgcgc aacggacgcg tcttcgtcag
     6961 attcgatggg gacaataaag atgaagcgat cgcgttcgga agcgttctaa agtagcgaag
     7021 ccggcacaga ccggggatcg gaaacccgac cgtgaggagg gtgcacagcg acttggattc
     7081 gcagaagcac cctcccttga cggtcgggtt tctgctttct gccatcccgc agtagaatcc
     7141 gctcgcaaaa tgcctgacgc taaagccaaa gttgggagcg agattcacga gcgactctgt
     7201 cgcgcgcgcg ccttcatcaa cgagcgctat cacgaaccga tcgacctgga tgaaatttcc
     7261 cgtgaagcgt gcctctctcg ctatca
//
LOCUS       DATDBY010000657         2226 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1516677, whole genome shotgun sequence.
ACCESSION   DATDBY010000657 DATDBY010000000
VERSION     DATDBY010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1516677"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..645
                     /locus_tag="VIT19_12355"
     CDS             <1..645
                     /locus_tag="VIT19_12355"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5839822.1"
                     /translation="LTGVSSYTQMLLGMLPESDPKHALLEKVRRQAERATDIVNNLLN
                     FSRTGNAEEFNQLNIHRVLDDTLQLLEPQLRRSQIEIVRDYGEELPEVHGNSGKLQQV
                     FTNLILNARDSISNGNGLVTLKTRNGEDGLVVVEVADNGVGIEPENVAKIYDPFFTTK
                     GVGGGTGLGLAVTYGIVQEHSGHITVLSTPGQGSTFRITLHTSDPRARMKVAVN"
     gene            742..2151
                     /locus_tag="VIT19_12360"
     CDS             742..2151
                     /locus_tag="VIT19_12360"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY5839823.1"
                     /translation="MAKRGSILVVDDEEIMRDVLETLLSAEGYRVDLSKTGEEGLDTY
                     TKRSYDVVLLDVSMPGIGGLRALEEFLKLDADAVVLMITAYATFDTAIAAWEKGAFGC
                     IRKPFQNEHIKAQVAAGIKRRRKEEERRSLRQAMSRDVDRGAIIGRSDIMQEVFRVVE
                     QVAPARSTVLITGESGTGKELIAKAIHEASPRVGRAFVTVNSSNIPSELLESELFGHT
                     RGAFTGAIAAKKGLFEVADGGSIFLDEIGDIPPETQVRLLRVIQEREFTPLGDTTPRR
                     VDVRIIAATNIDLKEAVRQGVFREDLYYRLSVVPIELPPLRDRHEDILPLAQHFVRKY
                     NEENGRQVSEHVNPEVLSLLENYSWPGNVRELENAIERAVVIAPGDEVTRECLRREIA
                     DPQAAAAVAREAVGASSGIDVTRGVNFYDEVRRFEIDLIRRALDQTGGHQSRAARLLG
                     MNPTTLNSKIKTYNINLRS"
BASE COUNT          484 a          634 c          655 g          453 t
ORIGIN      
        1 ttgaccggcg tgtcttctta cacgcaaatg ctgctcggca tgctgccgga aagcgatccg
       61 aagcacgcac ttctggagaa agttcgccgg caagcagagc gcgccaccga catcgtcaac
      121 aacttgctga acttctcacg caccggcaac gcggaagagt ttaatcaact caacattcat
      181 cgtgtgctcg acgacacctt gcaactgctc gagccgcaac tgcggcgcag tcagattgaa
      241 atcgtgcgcg actacggcga agagttgccg gaggtccacg gaaattcggg caagctgcaa
      301 caggtcttca cgaacttaat cctgaatgcg cgcgactcaa tctcgaatgg taacggtttg
      361 gtcactctga agacgcgtaa cggtgaagac ggtctggtcg tcgtcgaagt tgccgacaac
      421 ggcgtaggca tcgagcccga aaacgtcgcg aagatttacg atccgttctt caccaccaag
      481 ggcgttggcg gtggcactgg tctcgggctg gccgtcacat acggaattgt gcaggaacac
      541 tcgggccaca tcaccgtttt gagcactccg gggcagggtt caaccttccg catcacactc
      601 cacacctccg atcccagggc ccgcatgaaa gtcgccgtta actaaccgct tcagctcgtc
      661 gccaagttac ttttgaaatc gatttcagtc ataatctcga ctttgcgcgt ctcatcggac
      721 gacgcggtgg tctgatccgt tatggctaag agaggctcaa tcctcgtcgt tgacgacgaa
      781 gaaataatgc gcgacgtgct cgagactttg ctctcggctg aaggctatcg cgttgatttg
      841 tcgaagaccg gcgaagaagg tctggacacg tacacgaagc ggtcttacga cgtcgttctg
      901 ttggacgtgt cgatgccggg catcggtgga ctgcgcgcgc tggaagagtt tttgaagctg
      961 gatgccgacg ctgttgtgct gatgattacc gcgtacgcga cgttcgacac cgcgattgcc
     1021 gcgtgggaga agggcgcatt cggctgcatt cgcaagccgt ttcagaacga acacatcaag
     1081 gcgcaggtgg ccgccgggat caagcgacgc cgcaaggaag aagagcgccg ctctctgcga
     1141 caggcgatga gccgcgatgt cgatcgcggg gcgatcatcg gccgctcaga catcatgcag
     1201 gaagtgtttc gcgtggtgga gcaagtcgca ccggcgcgct cgaccgttct catcaccggc
     1261 gaaagcggca ccggcaaaga actgatcgca aaggcgattc acgaagcgag cccgcgcgtc
     1321 ggccgggcgt ttgtgacggt gaacagttcg aacattcctt ctgagttgct cgagtccgag
     1381 ttgttcggtc acacacgggg cgcattcacc ggcgcgatcg ccgcgaaaaa aggtttgttc
     1441 gaagtcgctg acggcggctc aatctttctc gatgaaatcg gcgacatccc gcccgagact
     1501 caggtgcgtc tgctacgcgt catccaggag agggaattca cgccgctggg tgatacgacg
     1561 ccgcgtcgcg tcgatgtgcg catcatcgcc gccaccaaca tcgatttgaa agaagccgtg
     1621 cgtcaggggg tgtttcgcga ggatctttac taccgcttgt cggtggtgcc gattgagctg
     1681 ccgcctttac gcgaccggca tgaggacatt ctgccgctgg cccagcattt tgttcgcaag
     1741 tacaacgaag aaaacggacg ccaggtgtcg gagcacgtca atcccgaggt gttgtcactg
     1801 ctggagaatt attcctggcc cggtaacgtg cgcgagcttg agaatgcaat cgagcgcgcg
     1861 gtggtcatcg ctcccggaga cgaggtcaca cgtgaatgcc tgcgtcgcga aattgccgat
     1921 ccccaagctg ccgccgcggt cgcgcgcgaa gcggtgggcg cgtcgtcagg aatcgacgtc
     1981 acccgtggtg tgaacttcta cgacgaagtg cgacgcttcg aaatcgatct cattcgccgc
     2041 gctttggatc aaaccggcgg ccatcaatct cgcgccgcgc gcctgctcgg catgaatccc
     2101 acgacgctca actcaaagat caaaacctat aacatcaatc tgcggtctta atggctggag
     2161 aaaaagcttt acacccttat gtgtttggca taggcttgcg ccgcctcaga ctttcacgaa
     2221 ggagaa
//
LOCUS       DATDBY010000658        16305 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_55908, whole genome shotgun sequence.
ACCESSION   DATDBY010000658 DATDBY010000000
VERSION     DATDBY010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 16305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16305
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55908"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2779
                     /locus_tag="VIT19_12365"
     CDS             <1..2779
                     /locus_tag="VIT19_12365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839824.1"
                     /translation="NKALNSLDNIERASGQTEPNQSLFNTFGFVVGGPLHLPRFGEGG
                     PSYYSGKDRAFFFVTYQGIRNPATSTIRSTSWAFLPSEFARLQATFPGNAVIQALTTQ
                     SVFAIRPNATALNTANVSFTAGGPTFQVGQPQYTIATPFTENDYSFRFDVKPTDKDSV
                     TFRYLHQAQTFVNSLAQANGFSGDIPAGSKNYGGNWTRQLSNKLVNDFKAYYQRIGVE
                     FGGGCNTGSPGCIPGPLEIGSAITNVTFPTISGRSLLSIGPATNLPQGRVGEVYQIAD
                     NLSWVRGNHSFIFGGEYKHLTQVSPFLPNFNGAFGFNSGTRVINNAPSTIALTVGDPT
                     LSYTEDDQYYFVQDDWKVRPNLTLNLGVRYEYTGQPINILNRLSVERESGAGRFFNPA
                     LPLSVRTVPAVPADKNNFAPRFGFAWSPRFWKGLLGEDATVVRGGFSIAYEPAFYNIL
                     GNVQGSAPFSAAIALNTANALSSTTTSPFPLPGSLTGDVIRSQAAASGILPLGQLDPR
                     YLSQTQVSPDFHAPYSEQWSFGIQRQFGKSVAEVRYVGTRGNDLFQNVNGNFFVGPLV
                     NGITNWFGTGINLPSFAHLLPPGTTAQVCTDNPATPFVNESTCNGRQLRQAGITVRTN
                     GGKSIYHGLQSRFNGRFFDNALNLGAAYTFSKTIDTQSEIFGFDIASPNAQNPFCLDA
                     CERSRSQIDRPHAFSMSAIYDVPFHREQRGVLGHILGGWQINAVYVLTSGEPYTPGQF
                     FNGLYGLGNTYLTSGDRPFNGNTSVDPRLVGISQLDAALLFGATLNNLNGFYSLNDLN
                     STGAETVVTPSQVRYILNLPGSARIFGTPFGDVTRNSLRGPALNQLNAGLFKNIKIGE
                     RFTVQLRGEAYNVLNHPNPGYGVNAAGYLPDFFTDDAGVPGIGGGSSFADKRDIQYAR
                     RVVQVGIRFLF"
     gene            3356..7243
                     /locus_tag="VIT19_12370"
     CDS             3356..7243
                     /locus_tag="VIT19_12370"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5839825.1"
                     /translation="MIKRFIFTVLAVCLFTATALAQTSNSGSLVGTVSGPDGVIPGAT
                     VTIIDSQTERERTAVTNSDGGFTFSGLEFGTYTVKVTAQGFKTHTATNLKIDAGQEYK
                     ITPTLEIGEISETVTVTAGAEVINATNAAMSNTISARDVKELPINGRNPLALLNTMAG
                     VNPLTASINGQRSTVTNYTRDGLNVQDNFIRLGGFVQDRPTVDDTGEFTAILQNAGAE
                     LGSSQTVQLVTPRGGTEFHGALYEFNRNSKFGANSWFGNRNGSERSFLNRNQFGGTIS
                     GPAPLPRFGEGGASLIRDKAFFFFNTEIFRQASSINGSGTTLVPQARTGAFTYVVACT
                     TAATCTPQGVTVGQQVTINVLSGTGLNLAGGNAGVFNLAGGTLGIDPVVQSRILANLP
                     TGGNVTATQGINFSQTLTFPVSAPVLRDAETGRFDVQFNDKHQANFVYKRTFDDNART
                     DLNYGFQSTPFSFQGATTVLYIGAWRWTPNSRFSNEVRGGKQYSNPLFGEGGVPTDFV
                     FSNAQAQHTLAGIVTSPIGAFRKQGRNTWYHNIQDNASYSFGNHSLRFGFNRDRFDIQ
                     SLNFANTTPLYNFSSTANPNTPGLTNALFPGGVNTTDLGRANNLRYLLGGIIGAANVR
                     ANIVDLATGFQLGAPAINQFVYSIWSGYVQDQWRVSPTLTLNLGVRYDLYSPLNNPQL
                     KYLESRVESGQTATQAALNPAGVYQSLGGNAGTPGDFSKADKNNFGPTASLAWSPNFE
                     SGLLRSLFPGQGKTVFRGGYRMSYNNQEYVRTPDNAYGQLVGLGSQTINAFQGGTTNL
                     RSVITPRADAAFPGVPGNFVAPGLPTLPITYAANNNAQGKAGLIWVFDPNIQAPLVHE
                     YNVGVQREIGWKSVIEARYVGSQSKQTWRSIDENQVIIGSNGFLADFNRARENCRLQA
                     LSLNPNNPITACTNAGFNAGIPGSQPLTVFPNVGGAGLLTNVTVLGLIQSGQVGELAA
                     TYITNNLSGTVNFLPNPNGFVANVTTNGGLYNYNSMQLEIRRRFADGFSYQVNYTFQK
                     ILADSLQDTQQSVDPYLDNANLKLNYARPTYDRTHTINASGNLELPFGKGRRWLNNGW
                     ASKIFGGFQMTNIINISSGAPLTIGDARGTLNRTARSGLQGATSTLTHNEIKKLVGVF
                     NTPNGIFYINPSVLQVTSTVTGANVFYDVTKPLPANIPRTSLVIRGASPIGTAPFPGQ
                     VFFHNAPGSTGNLPLNFLNGPWYFNWNAGFFRNFKWGESRNIQIRAEAFNVLNNPSFA
                     SPGSLDVSSTAFGLINGTNSAARIVQFGFRLDF"
     gene            complement(7408..8310)
                     /locus_tag="VIT19_12375"
     CDS             complement(7408..8310)
                     /locus_tag="VIT19_12375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839826.1"
                     /translation="MKTLFASACWLSMIITLTVCLTLTGFPASASDKMRPEDVVAKHI
                     ESVGAGETRASIHNRIVAGTVVFTATAPSIAKFDGDCVLASEGNKNMIAMAFGGAVVQ
                     EKFAFDGSKVTAGSPRPGSRGYWGDFLLTHDNIVKHGLVGGVLSESWPLFKLSDKKQS
                     LEYRGTKKIDGKTLHEIEYVPRGSSDLKIVLFFDSETFRHERSEYTRTISAGLGSATT
                     LGSGIRAGAQDSSGQQRTTRYKMVEEFGDFKKEGGLSLPHSYKVKLEFDTRGGTQVVN
                     WDFTLTGFAFNQPLPPATFNVKAN"
     gene            8531..9235
                     /locus_tag="VIT19_12380"
     CDS             8531..9235
                     /locus_tag="VIT19_12380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839827.1"
                     /translation="MKALNLLMLALVFAGTARAQDSPAPSTANPPAVTVTQVSSRKEV
                     FIPALYEDPMVINQDQKELQRDQKATIRANADRARQGQDPLPMPGKKIASNTPVGSTP
                     MGTPLGDEPAGNQNLPAQPDSGPSSVRYIYEAKVKNTGEKTIRAIFWTYSLFDKETRA
                     LVGRHRFRTNVTIRAGKNGSLVGRSKNPPVGVVSASKPSKDKETNYAEAVTIDRIDYT
                     DDTFWQPADPDNSPRG"
     gene            9653..13273
                     /locus_tag="VIT19_12385"
     CDS             9653..13273
                     /locus_tag="VIT19_12385"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5839828.1"
                     /translation="MRRVLRFLASGFVLVSVCTLALAQGTQTGAITGVVSDPQGGVVA
                     GATVDIINESTGSSVRTLATGGDGGFSAGLLPPGRYRLEISSANFKKAIVSGVEVRIN
                     DTTRQDVALEVGRLEEVVNVEASPSLINPTSAQTGQPLDSQTISRLPLASPNIMFLLS
                     LSSGTGSEPVDVRSSGRGNVDVNVNGQRTTNNSVTLDGVNVNDFNLAHFDTIPLPNPN
                     TIQDFKVATSLYDASSGSKGGGALGLVLKSGTKDFHFDLNWSHRNDALNANEFFRNKA
                     GLSKRARLLQNVFGGSASGPVPKLGGFWFFNYQGVRGRNGIDPAGATLNPLLQAFPTN
                     PDGTTSAALLAPAFGLTTAQIDPIAVNILNLKTDIYGGGFAIPRPGGAGCATSPVTGT
                     FRCVFSAIIPVVANQHTITYDRYIREGKDKFSWRWFWDDGAAARPYGTAASLAFPSDS
                     IQKNRFTAFTHTHVFNSSMTNELRAGYSRFISSFAPTDQISLADIGATRPNIGEVPGV
                     YFFSITNLFSLGTGVNDERGTVSNNYNLADTFSWTFGKHSLRIGGEATQYQLNRFNNF
                     AVRGSLTFGATTGAGNTFSAFQNFLQGRITGIQSAFGDAARNFVATDYAAFVQDDYRF
                     SQRLTFNFGFRWEPMSFGHDKLYRQNIYDPAVAAQGRNPFRFPEKVDLGGFKGTPGIP
                     DCALGHCRDMNNFAPRFGFALDINGDQKMVLRGGFGIYYQRLSNQNILQGALGPPFTV
                     QPIDTRANPPAFQLANPLAGQGAAPGIATAFIPQWARFAGLRRVSGAGPLDVNDPGVG
                     PIFINEDGQACLNYGGTATNCVINLASFTSSPVDAYTPYTQQYNLTLQRELWKGWGVE
                     AGYVGTHYIGGLGIWDPFLAPLASPSSPIVVRDSTGASHTITTNTANNEELRHQIIGL
                     SRKRGSRYTGNIGEGKYHSAQFTLLRRLQRGLYFQAAYTISRTTDNVSGSQSTDELNA
                     TRAGQGGANILNFQNDPKQNRARGDFDRPHRFVVSYSYDLPVMKNSFMDNQIFKGWTI
                     SGIVTYQSGLPFSITDSTSGGAFGATGIGTGNLVCRPAAQQIASLPTCTPGTTTTVDQ
                     LLLPGPIQNNLNNYINPNFVSTSVPVANGTSEATGYGNVPRNAFRAPFQQNWDFSLMK
                     RFTVKERHQFQIRMDVFNLWNHPIFQTPSSVGVASPATFGVITSTAIPARLIQFNVGY
                     KY"
     gene            13403..14422
                     /locus_tag="VIT19_12390"
     CDS             13403..14422
                     /locus_tag="VIT19_12390"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839829.1"
                     /translation="MSLSIEIDTVRKLSIRLQTLLAFLLITCPLFAQRDRDTFTPNPT
                     LEISGRVLLAETSQPGRNIEVRLERFTGGTVDQLMTDNGGRFRFIVQQRGYYKVVVNA
                     AGFSQAHQDADLQVLFRAFLVFELVTDKSRNSARNAGGFGFIDVRVPSAAREEFARAQ
                     TALTRKDFAEAIPHLQRAVFMHPTYYEAQLLLGTTLMDLRQWEKAEDTLRRTLEIKPD
                     SAPALFSLGEVFWRRKRFDEAERILLEGLKLDEASWHGHFTLARLYYEQNEIKKAAPP
                     IGRTLQLKPDFAEAHLLAGNILLKLNQSERAVIEYQEYLRLAPKGDFAAEARNLIDKL
                     KANNR"
     gene            14505..15587
                     /locus_tag="VIT19_12395"
     CDS             14505..15587
                     /locus_tag="VIT19_12395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839830.1"
                     /translation="MDPIANQLALAPLGAGDLIDRAVRLYRRHFLTLIRIAAPPVLVS
                     AVGSTLTTIAFRAIGATPSSMRLFLYILVLMGGVLVIVAGSLFSLIVMGGAARNLVAH
                     LLWDEPVSFRSTYAAVKSRFWGLLGASILIALWLTFCAWLATMGSYLVFVVVFVGVVA
                     IASVIPEFVTGIVVVFGVIGALIGALVLFFLLAGRMAYVPQAMLVEGRSVGSAIGRSF
                     SLASGNVRRLMAMALFTFFATYSALALLIIPLGWYGWASGVDVSPFGSEWPAWYAIGY
                     EVILQCSHILLAPIWMLGMSLLYVDERVRHEGYDIELMAARQLPPMPELPGVMSPFAP
                     ALVTRRTAQFVPPPAPMPPQSVLGLH"
     gene            15601..>16305
                     /locus_tag="VIT19_12400"
     CDS             15601..>16305
                     /locus_tag="VIT19_12400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839831.1"
                     /translation="MRTVFHSLRVVVGAMLFALALCVQGQAASFEDYRARVSQAVSAI
                     EQLEAPDYYTDDPLQRDSVMQNALTRLRQLLPAHESVLFNGQNIDVDNAWFHEALDEY
                     QKLGHQPERASAVVTRAREQLRALLERLDEMKSASSTDGKDANKARLAEILRRSEYDK
                     SVAEKSAIARLWEEFIRWLSKLIPKVGPLQPGTGQALSGVAQVVVIGFSVLLIAFLIW
                     KFLPGYLRNRGNRKKKA"
BASE COUNT         3612 a         4610 c         4359 g         3724 t
ORIGIN      
        1 caacaaggca ctgaatagtc tcgacaacat cgaaagggcc agcggacaga ccgagcccaa
       61 tcaaagcctt ttcaatacgt ttggtttcgt agtcggcggc ccccttcacc ttccgcgttt
      121 tggcgagggc ggcccaagct actacagcgg aaaagatcgc gctttctttt tcgtaacgta
      181 ccagggcatt cgcaacccgg cgacctcgac gatacggtcc acctcgtggg cgtttctgcc
      241 ttcggagttt gcccgtttgc aggcaacatt tcctggcaac gcggtgattc aggcgctaac
      301 aactcagagt gttttcgcca ttcgtccaaa cgccaccgcg cttaacaccg ccaatgtcag
      361 tttcactgcc ggcggaccga cgttccaagt tggtcagcca cagtacacaa tcgcaactcc
      421 ttttacggag aacgactata gtttcagatt tgacgtaaaa ccaacggaca aagacagcgt
      481 cactttccgt tatcttcacc aggcgcagac tttcgtaaac tccttagcgc aagctaacgg
      541 tttcagcggc gacatccccg ccggtagtaa gaattatggc ggcaactgga ctcgccagtt
      601 atcaaacaaa ctggtaaacg acttcaaagc gtattaccag cgcattggcg ttgaattcgg
      661 cggcggctgc aacactggct cgccaggctg catcccgggt ccactggaaa ttggatccgc
      721 gataacgaac gtcacttttc caactatcag cggccggtca cttctgagca ttggcccagc
      781 cacaaactta ccgcagggcc gtgtcggaga ggtataccaa attgcggata acctgagttg
      841 ggtccgcggc aatcactcgt ttattttcgg cggtgagtac aagcacctga cgcaagtttc
      901 accatttctg ccgaacttca acggcgcttt cggttttaac tcaggcaccc gtgtgatcaa
      961 taacgcgcca tcgaccatcg cattgacggt gggcgatccg acgttatctt acaccgagga
     1021 tgatcagtat tacttcgtac aggatgactg gaaagttcgt cctaacctga ctttgaacct
     1081 cggggtccgc tacgaatata cggggcagcc catcaacatt ctcaaccggc tctcggttga
     1141 gcgcgaaagc ggtgcggggc ggttcttcaa tccggcgctg ccgttgagcg ttcgcacggt
     1201 gccggcggtg ccagctgaca agaacaactt tgcgccgcga tttggctttg cctggtcgcc
     1261 gcgtttttgg aaggggctgt tgggtgaaga cgcgaccgta gttcgcggcg gcttctcgat
     1321 cgcatacgag cctgccttct ataacatcct cggtaacgtg caaggatcgg cgccattctc
     1381 agcggcgatt gcgctcaaca ccgcgaatgc gctcagttcg acaacgacgt caccgtttcc
     1441 gctaccgggt tcgctgaccg gcgatgtgat tcggagccaa gcggcagcat cgggcattct
     1501 gccgctaggc caactcgatc cgcgttatct atctcaaacg caggtgtcac cggactttca
     1561 cgctccgtac tcggagcagt ggtcgttcgg catccaacgc cagtttggca agagcgtcgc
     1621 cgaagttcgc tatgttggca cgcgcggcaa cgacctgttc cagaacgtca acggtaactt
     1681 ttttgtggga ccgttggtga acgggattac gaattggttc ggcactggca tcaacttgcc
     1741 gtcgttcgcc cacctcttgc cgccaggcac cacggcgcaa gtctgcactg ataatccggc
     1801 gacgccattc gtcaacgaaa gcacctgcaa cggccgtcag ttgcgtcagg ccggcatcac
     1861 ggtccgcaca aacggcggca agtcgattta tcatgggttg cagtcgcgct tcaatgggcg
     1921 gttcttcgac aatgcgttaa atctgggcgc ggcttatacc ttcagcaaga caatcgatac
     1981 tcaaagcgaa atctttggtt tcgatatcgc ttcgcccaac gcgcagaatc cgttctgcct
     2041 ggacgcgtgc gagcgctcgc ggtcgcaaat cgatcggcca cacgccttct cgatgtccgc
     2101 catctacgac gttccattcc acagagaaca gcgcggggtg ctcggtcata ttctgggagg
     2161 gtggcaaatc aatgcggttt acgtcctgac cagcggcgaa ccctacactc cgggtcagtt
     2221 cttcaacggg ttgtatggtt tgggcaacac gtacctgaca tcaggtgacc gaccgttcaa
     2281 tggtaatacg agtgtcgatc caagactggt tggaatcagc cagcttgacg ccgctcttct
     2341 tttcggcgcg acactcaaca acctcaatgg gttttactcg cttaatgact tgaactccac
     2401 gggtgcggaa accgtcgtca cgccgagtca ggttcgctac atactcaacc tgcccggatc
     2461 ggcgcgtatt ttcggtaccc cgttcggtga cgtcactcgc aactcgctgc gtggacctgc
     2521 gctgaatcag ctcaacgccg gcttgttcaa gaatatcaag atcggcgagc gttttacggt
     2581 tcagctgcgc ggcgaagctt acaacgttct gaaccacccg aacccgggct acggcgttaa
     2641 cgccgccggt tacctgcctg acttctttac cgatgacgca ggcgtaccag gtatcggcgg
     2701 tggctccagc tttgcagaca aacgcgacat ccagtacgct cgccgcgtcg tccaggttgg
     2761 catccgcttt ctcttctaac ttaagcttca gatagttttt ccggggagag ttcgcaagac
     2821 tctccccctt tttttttgtg cgcgcctggt gatcagtgtc ttacgcagca aggcgaacgc
     2881 atcgcaatag gtcaagttca ccgtttttgg aaagcctttt agtcctccca ggactttcgg
     2941 attcgcgacc ccaaattgat tcacgggagc gatccttctt cgcggcctgc tcgtgggctc
     3001 tgtcgtgatc gcggcgttaa ctaacggcat cggcgcaaag acgtccggag gcacaggttc
     3061 cgggggcagc gcagcggatt cgtctgccct cggaattcaa taattcgtag aatcctccga
     3121 attttggaat ttgaacacgt aggttcgacc gcccattttg gctcaatcct catgaattta
     3181 gctgatgcgc gtggcggcat acttcttgcc agttttataa gccaaagccc tagtcgatgt
     3241 gccaataaac ccttcgggcg cgcacatcag gatataagca gtttggcaat tcgcttcccc
     3301 ccgggttctg gttttctggg gaagccggcg acctaaaacc ttgaaggagc tcactatgat
     3361 taaaagattt atctttacgg tgctagcggt gtgcctgttc acagccacgg cgctggccca
     3421 aacctcgaat tctggttctt tggtcggcac tgtttccggg cctgatggag tgatcccggg
     3481 agcaacggtg acgatcatcg acagccaaac agagagagaa cgaactgctg tgacgaacag
     3541 tgatggcggg ttcacgttct caggtcttga atttggcact tacacagtta aggttacggc
     3601 gcagggtttc aaaacccaca ctgccaccaa cctgaaaatc gacgccgggc aggagtataa
     3661 aatcacgccg acgcttgaga tcggtgagat ttctgagacc gtcacggtaa ccgccggcgc
     3721 cgaggtcata aacgcaacca atgcggcaat gtccaacacg atttcagcaa gggacgtgaa
     3781 agagttgccg atcaacgggc gtaatcccct ggctttgctc aacacgatgg ctggtgtaaa
     3841 cccgcttacg gcttcgatca atggtcagcg cagcacggtc actaactaca cgcgcgacgg
     3901 cttgaacgtg caggataact tcattcggtt gggtggtttc gtgcaggacc ggccgacggt
     3961 agatgatact ggtgagttta cagcgatcct tcagaatgcc ggtgctgaac tcggcagctc
     4021 acagacagtg caactcgtaa ccccccgcgg tggaacagaa ttccatggcg cgttgtacga
     4081 atttaaccgc aattcaaagt tcggtgcgaa ctcatggttt ggcaaccgta atgggtcaga
     4141 aagatcgttc ctgaatcgaa atcagtttgg cggaaccata agtggccccg ctccgctgcc
     4201 tcgctttggt gagggcggtg cctcgctcat aagggacaag gccttctttt tcttcaacac
     4261 tgagatcttt cgacaggctt cgagtattaa cggaagcgga accactttgg tgccgcaagc
     4321 gcgcactggc gcgttcactt acgttgtggc ttgcaccacc gccgccacct gcacccctca
     4381 gggagttacg gtcggacagc aggttactat caacgttctc tctggaaccg gcctgaacct
     4441 ggcgggcgga aacgctgggg tcttcaatct tgcgggaggc acgctcggta tcgatcctgt
     4501 cgttcaaagc cggattctgg ctaatcttcc gactggcggc aacgtcaccg ccacccaagg
     4561 cattaacttt agtcaaacgt tgacttttcc agtctcagcg ccggtcctcc gcgacgcgga
     4621 aacgggccgg ttcgacgttc agtttaatga taagcaccag gccaacttcg tatacaagcg
     4681 tacgttcgac gataacgccc gcaccgacct gaactatggg ttccaatcga ccccgttctc
     4741 tttccagggc gcaacaactg tgctttacat cggagcatgg cgttggacac ctaactcgag
     4801 gttttcgaac gaggttcgtg gtggtaagca atacagcaat ccgcttttcg gcgagggcgg
     4861 cgtccccacc gacttcgtat ttagcaatgc ccaagcgcag cacacgctgg ccggcattgt
     4921 taccagtccg ataggcgcat tccgcaagca gggtcgtaac acctggtatc acaacatcca
     4981 ggacaacgcg agctattcgt ttggtaacca ctcgctgcgc ttcggattca atcgcgaccg
     5041 atttgacatc caatcgctca actttgccaa tacgacgcca ctttacaatt tcagctcaac
     5101 tgcaaatccg aatacgccag gcctcacgaa tgcgcttttc ccgggaggcg tcaacacgac
     5161 ggatttgggt cgggccaaca atttacgcta cctgctgggc gggatcatcg gcgccgcgaa
     5221 tgtaagggcg aacattgttg atctagcgac gggtttccag ctcggagccc cggcaatcaa
     5281 ccagttcgtt tattcgattt ggtcaggcta tgtgcaggat cagtggcgag tttcaccgac
     5341 cctgacgcta aatctgggcg tgagatatga cctgtactcg ccactcaaca atcctcagct
     5401 taagtacctc gaatcgcggg ttgaatcggg gcaaacagcg acgcaagctg cgttgaatcc
     5461 cgctggcgtg tatcaatccc tcggaggcaa cgccggtact ccgggcgatt tctcaaaagc
     5521 cgacaagaac aacttcggcc cgacagccag ccttgcctgg tcgcctaact tcgagagcgg
     5581 tcttctgcgc agtcttttcc ccggccaggg caagacggta tttcgtggtg gttaccgaat
     5641 gagctacaac aaccaggagt acgtccgaac gcccgataac gcttatggtc agttggttgg
     5701 attgggatcg cagaccatta acgcgttcca gggtgggacg accaatctgc gatccgtaat
     5761 tacgcccagg gcggatgcgg ctttccccgg agtacccgga aacttcgtcg cgccggggct
     5821 tccgacgctg cccattacct atgcagccaa caacaacgca caaggcaaag cgggcttgat
     5881 ttgggttttc gatccgaaca tccaggctcc gctggtccac gaatataacg ttggcgttca
     5941 gcgcgagatc ggctggaagt cggtaatcga agcacgctat gtcggtagcc agagtaaaca
     6001 gacgtggcgc tcgatcgacg aaaaccaggt gatcattggc tcgaatggct tcctggcaga
     6061 ttttaaccga gcgcgcgaaa actgccggct gcaagcttta tctctcaatc caaacaaccc
     6121 gatcacggct tgcaccaacg ccggcttcaa cgctggaatt ccagggagtc agccgttgac
     6181 ggtgtttccg aatgtggggg gcgctgggtt gcttacaaac gtaacagttc ttggtctgat
     6241 tcagtctggt caagtaggcg aactggctgc tacgtatatc accaacaacc tgtcggggac
     6301 agtgaacttc ctgccgaatc caaatggatt cgtcgcgaac gttacgacga atggcggttt
     6361 gtacaactac aattcaatgc aactggagat tcgtcgtcgt ttcgccgacg ggttctctta
     6421 ccaggtgaat tacactttcc agaagatcct ggctgattcg cttcaggata ctcagcagag
     6481 cgttgacccc tacctggaca atgccaatct gaaactgaac tacgcgcggc cgacctatga
     6541 tcggacgcac acgatcaatg ccagcggcaa cctcgaacta ccgttcggta aaggtcgtcg
     6601 ttggctgaac aatggttggg ccagcaagat tttcggtggc ttccagatga cgaacatcat
     6661 caacatcagt tcgggcgctc cgctcacaat tggcgatgct cgtggcacac tgaatcgtac
     6721 tgcaaggtcc ggtctacagg gggcgacgtc tacgttgacc cacaatgaga tcaagaaact
     6781 ggtcggagtc ttcaacacgc cgaacgggat tttctatatc aaccccagcg ttttgcaggt
     6841 cacctcgact gtcaccggcg ccaacgtctt ttatgacgtt accaagccgc tgccagccaa
     6901 catcccgcgc acctcgcttg ttatccgcgg cgccagcccc atcggcacgg cacccttccc
     6961 gggccaggtg ttcttccaca acgcgcccgg atcgacgggt aatctgccgc tgaacttcct
     7021 caatgggccc tggtatttca attggaacgc cggattcttc cggaatttca aatggggtga
     7081 gagtcggaac attcaaatca gggctgaggc gttcaatgtt ttgaacaacc caagcttcgc
     7141 ttcacccggt agtctggacg tgagcagcac cgcgttcggt ctcatcaacg ggacgaatag
     7201 tgcagctcgt atcgttcaat tcgggttccg tctcgacttc taacccttcg gtctgacaca
     7261 gttcagtccg catagcaatc gggcgttgct tcgacagaag caacgcccga agttttttat
     7321 gcctttgctt tttgttcttt atcctgaggc gcggtttgcg atattgcgag gttctttccg
     7381 acgcccatct ggtttgagcg ctttaactca atttgccttc acgttaaagg tcgccggcgg
     7441 aagaggctga ttgaaagcaa aaccagttag cgtgaagtcc cagtttacaa cctgcgttcc
     7501 gcctcgagtg tcgaattcaa gcttaacttt gtaactgtga ggcaagctta ggccgccctc
     7561 ttttttgaag tcgccgaatt cctccaccat tttgtatcgc gtggtccttt gctgtccgga
     7621 actgtcctgt gcaccggcgc gaatgccgct ccccagggtt gtagccgatc ccaagccagc
     7681 cgagatcgtg cgcgtgtatt cactgcgctc atgtcgaaac gtttctgagt caaaaaatag
     7741 aacgatcttc aagtccgacg atccgcgcgg aacatattcg atctcatgca gcgtcttgcc
     7801 atcgattttc ttcgtacctc gatactcaag cgattgcttc ttgtcggaca acttgaatag
     7861 tggccatgac tctgacaaca cgcctccaac caaaccgtgc ttcacgatgt tatcgtgcgt
     7921 cagcagaaag tcgccccaat agccccgact tccgggacgc ggcgaacctg ccgtaacttt
     7981 gcttccatca aaggcgaatt tctcctgaac gacggcgcct ccaaatgcca tcgcgatcat
     8041 gttcttgttt ccttcggaag ccagaacgca atctccatca aactttgcaa tgctcggcgc
     8101 ggttgccgtg aacaccacgg ttcccgccac gatccgattg tggattgagg cgcgtgtctc
     8161 tccagcgccg actgactcga tatgtttagc cacaacatct tccggccgca ttttgtctga
     8221 ggctgacgcc ggaaagccgg tcagcgtcag gcaaaccgtc agagtaatga tcatgcttaa
     8281 ccagcaggcg cttgcgaata aagttttcac ggttctaatt ctccttaaag ccttttcagg
     8341 aaaagtaaca ggacgctagg ttatgtcata gagtgtttgc ggaacgcaag attggaggca
     8401 ccgcatccgg ttcctctcta tgacgcaacg aggaatggtt cacgacgcct cgaggcaaag
     8461 agatttggct tgcgccttgg gcgtcaaggt gggacaatcg gagccactcg tccttccgaa
     8521 gacatctatc atgaaggcac taaaccttct catgttggcg ctggtgttcg cgggaacggc
     8581 ccgcgcgcaa gattcacctg ctccgagcac ggctaatccg ccggcagtta cagttactca
     8641 agtcagctcg cgtaaggaag tcttcatccc ggctctttac gaagatccaa tggtcattaa
     8701 ccaggatcag aaagagttgc aacgcgacca aaaagcgacg atcagggcaa acgccgacag
     8761 agccagacaa ggacaagacc ccctgccgat gccaggaaag aagattgctt cgaacacgcc
     8821 cgtcggaagt acgccgatgg gaactccgct gggagatgaa cccgcgggaa atcagaatct
     8881 tccagcccag cccgattcag gtccttcttc ggtacgctat atctacgagg cgaaggtcaa
     8941 gaacactgga gagaaaacaa ttcgcgcgat attttggacg tactccttgt ttgataaaga
     9001 gacgcgggcc ctcgttggtc gccaccggtt tagaaccaac gttacgattc gtgctggaaa
     9061 gaacggaagc ctggtcgggc gttcaaagaa tcccccagtc ggagtggtga gcgcgtcgaa
     9121 gccttcgaag gacaaagaga ccaactacgc cgaagcggta accatcgatc ggatcgacta
     9181 caccgacgac accttctggc aacctgccga tccggataac tcgccgcgcg gttagcagta
     9241 aaccgtcatc cctggagtca tcaacaaatc tagtaacgcc accggaacca cccgggtgcg
     9301 tctcggttgg aatgcggacc ttttctgtcg aggcgagaca gaaggttgaa gccggccaat
     9361 ccctactctg atcagtcaat acccccgcca cgcgattaaa ttcgacccag ccatccaaga
     9421 ttttggacaa aaacccaaaa ctttgggtcg caaatcagcc tgattgttca ctgagaaaac
     9481 tcgaaacctt aaattggggc gagaaagaac gagggttgat cgaaccttca cgacgggaac
     9541 gttgcttgcc taaaggcgag caaagccttt tccgcatccg ctgtcccgat caggtcggat
     9601 gcccgttcga acaagccggg tcagttctaa aaacttgaag gaggaagcag cgatgcgtag
     9661 agttcttcgt tttttagcaa gcggattcgt attggtgtct gtgtgcacat tggcgttggc
     9721 ccagggcact caaacaggag ctatcacagg agtagtttca gatccgcagg gaggggtcgt
     9781 ggcaggggcg acggtagaca taattaacga aagcacagga agctccgtgc gaactctcgc
     9841 aactggcggt gacggcggat tttccgcagg gctcttgcct ccgggacgat atcgtctgga
     9901 aatctcatcc gcgaatttta agaaagcaat cgtgtcgggt gtggaagtgc gtatcaatga
     9961 tactactcga caggatgtag cacttgaggt gggcaggctt gaagaggtcg tcaatgttga
    10021 ggcgtcacct agcttgatta atccaaccag tgctcaaacc ggccagccgc ttgattctca
    10081 aacgattagt cgcctaccct tggcgtcgcc aaatatcatg ttcttgcttt cgctctcaag
    10141 cggtaccggg agtgaacctg tcgatgtccg cagctcagga agaggcaacg ttgatgtcaa
    10201 cgtcaacggg cagcgcacta ccaacaacag cgtgacgctc gacggagtga acgttaacga
    10261 ctttaatctg gcgcacttcg atacaattcc gcttcccaac cccaacacca tccaggactt
    10321 caaagtcgca acctcgctct acgatgcatc gtcggggagt aagggtgggg gagcgcttgg
    10381 cttagttctc aagtcaggca ccaaggattt ccattttgac cttaattgga gccatcggaa
    10441 tgatgctctc aacgccaatg agttctttcg aaataaagcc ggcctaagca agcgagcacg
    10501 cttgctgcaa aacgtctttg gcggcagcgc cagcggaccc gttccgaagc tgggcggatt
    10561 ttggttcttc aattaccagg gagttcgcgg tcgtaacgga atcgatcctg ccggcgcaac
    10621 cttgaatccg ttgcttcagg catttccgac gaacccagat ggcactacct cggcggctct
    10681 gctagccccg gcatttgggt taacaaccgc tcagatagat cccattgcag tgaacattct
    10741 taacctgaag accgatatct atgggggcgg gttcgcgatc ccacgtccgg gcggtgccgg
    10801 ttgcgcaacg tctccggtaa cgggcacgtt tcgctgtgtt ttttccgcca tcattccggt
    10861 ggtggccaac caacacacca tcacctacga tcgctacata cgggaaggta aagataagtt
    10921 ctcatggcgt tggttctggg atgacggagc cgcggccagg ccttacggaa cggcggcttc
    10981 gttggctttt cccagcgata gcatccagaa gaatcgcttc acagccttca cccacacgca
    11041 tgtttttaac tcgagcatga caaacgaact tcgcgcgggt tacagtcgct tcatctcgtc
    11101 attcgcgcca acggatcaaa taagcttggc ggacattggc gccacccggc caaatatcgg
    11161 tgaggtgccg ggagtttact tcttttccat caccaatttg ttctcgctgg ggaccggcgt
    11221 taacgacgag cgcggcactg tgtcgaacaa ctataacctg gctgacactt tctcctggac
    11281 cttcggcaag cacagtctga gaataggcgg tgaagccacg cagtaccagt tgaatcgctt
    11341 caacaacttt gccgtccgcg gatcgcttac gttcggtgct accacgggag ccggtaatac
    11401 attctccgcg ttccagaact ttcttcaggg tcggattacg ggtattcagt cagcttttgg
    11461 cgacgctgcc cgcaatttcg ttgcaactga ctatgcggca ttcgtccagg atgattacag
    11521 attttctcaa cggctaacgt tcaacttcgg cttccgttgg gagccgatga gcttcggcca
    11581 cgacaagctg taccgccaaa acatttacga tccagccgtg gcagctcaag ggagaaaccc
    11641 ctttcgcttc cccgaaaaag ttgatctcgg aggcttcaaa ggcactcctg gcattccgga
    11701 ttgcgccctg ggtcactgtc gtgacatgaa taactttgct ccacgctttg gcttcgcact
    11761 ggacataaac ggcgatcaga aaatggtgct tcgtggcggt tttggaattt actaccagcg
    11821 gctgtccaac caaaacattc tgcagggcgc gctggggccg ccgtttacgg tccagccaat
    11881 tgatacgcgc gcgaacccgc ccgcgtttca gctggcgaat ccgcttgcgg gacagggcgc
    11941 cgcgcctggg atagcaacgg catttattcc acaatgggca agattcgcgg gactgcgccg
    12001 agtcagcgga gcgggtcctc ttgatgtaaa cgatccaggc gtgggaccca tttttatcaa
    12061 cgaagatgga caggcatgtc ttaactacgg cggcacggcg acgaactgtg tgattaatct
    12121 tgcttcgttt accagttcgc ctgtcgatgc ttacacgccc tatacccagc aatacaatct
    12181 gacgcttcag cgcgagctgt ggaaaggttg gggagttgaa gcgggctatg taggtaccca
    12241 ctatatcgga ggcttgggaa tctgggatcc tttcctggca cccctggcca gcccttcgag
    12301 cccgatcgtg gtgagagact caaccggtgc cagtcacacc atcaccacga acaccgcgaa
    12361 caacgaagag ttgcgccacc agatcatagg gctctctcgc aaacggggat cacgctatac
    12421 gggcaacatc ggggagggga aataccattc cgcccaattt accctgctgc ggcgtctcca
    12481 gcgtgggctc tacttccagg ccgcatatac gatttccagg accaccgaca acgtcagcgg
    12541 ttcacagagc acggatgagt taaatgcaac ccgcgcaggc cagggtggcg ctaatatcct
    12601 caacttccaa aacgacccga agcaaaaccg ggcgcgaggc gattttgatc gcccgcatcg
    12661 attcgtagtg agctactcct acgatctgcc agtaatgaag aatagcttta tggacaatca
    12721 gatcttcaaa ggctggacga ttagtgggat cgttacgtat caaagcggct tgccattctc
    12781 tatcactgac agcaccagtg gtggcgcctt tggcgccacg ggaatcggca cgggcaatct
    12841 ggtttgcagg cccgcagccc agcaaattgc atcgctcccg acttgcacac cgggcacgac
    12901 cactacggtt gaccaattgc tgctacccgg tccaattcag aataatctga ataactacat
    12961 taacccgaac ttcgtgagca cgtccgtccc tgtggctaat ggaacctctg aagccaccgg
    13021 ttacggcaac gtcccgcgaa atgcatttcg ggcgcctttc cagcagaact gggacttctc
    13081 attaatgaag cgattcaccg tgaaggagag acaccagttc cagatccgga tggacgtttt
    13141 caacctctgg aaccatccaa tcttccagac accatcgtcc gtgggagtgg catcgccggc
    13201 aacgtttggc gtcataactt ccacggctat tccggcgcgg ctgattcagt tcaatgtggg
    13261 ttataagtac tgaggaagtt cggcggcagt aacacaagcc gggcgactgc aaagccgccc
    13321 ggcttaactt ttctttatcg acgtctgaga tgagggtctg atccggttct cgactacaga
    13381 gcagattatc tcttttcgat aattgtcctt atcaattgag atcgacaccg tgcgcaagct
    13441 ttctattcga ttgcagactc tgctcgcctt tctgctaatc acctgtccgt tgtttgctca
    13501 acgagaccgg gacactttca ctcccaaccc tacattagaa atctccggcc gagtccttct
    13561 agctgaaacc tcccagccgg gccggaatat cgaagtgcgc ctggagagat tcaccggcgg
    13621 caccgtcgat cagctcatga cggataacgg cggcagattc cgatttattg tccagcagcg
    13681 cggatactac aaagtcgtgg taaatgcagc cggctttagt caggctcatc aggatgccga
    13741 tctccaggtt ttgttcagag catttctggt ttttgagctc gtcactgaca agtcacgcaa
    13801 ctccgcaaga aatgcaggag gattcggttt cattgacgta cgagtcccaa gcgcggcgcg
    13861 cgaggagttt gctcgcgcac aaactgcgct gacgaggaaa gattttgcag aggcaatccc
    13921 gcatctccag cgggccgtat tcatgcaccc aacctattat gaagctcaat tgttgctggg
    13981 gacgacgctg atggatctgc gccagtggga gaaggccgaa gacactcttc gccgaaccct
    14041 ggagatcaag ccggatagcg cgcccgcgct gttttctctg ggcgaggtat tctggcgccg
    14101 gaagcgcttc gatgaagcgg aaaggatttt gctggaaggc ctcaagctcg atgaagcgtc
    14161 ctggcatggt cacttcaccc ttgctcgtct ttactacgag cagaatgaga tcaaaaaagc
    14221 ggccccaccg attggccgca cgctccaact taaacctgat tttgctgaag cgcacttgct
    14281 cgccggtaac attcttctca aattgaacca aagcgagcgc gcggttatcg agtaccagga
    14341 gtatcttcgc ctcgcgccca agggagattt cgcggcggaa gcgcgtaacc tcatagataa
    14401 gctaaaggcg aacaatcgct aacagttttc ccacagcctt gttgccgaac attcagatcg
    14461 acggtcttga ttaagaccca aaaaaccagc atgattccgc gcgaatggac ccgattgcta
    14521 atcaactggc gctcgcccca ctcggcgcag gtgatctgat cgatcgcgcg gtgcgattgt
    14581 atcggcggca ctttctcacg ctgattcgca tcgccgcgcc gccggtactg gtgtccgcgg
    14641 tgggctcaac cctgacgacg atcgcctttc gagccatcgg cgccacgccg agctccatgc
    14701 ggctctttct ctacattctc gtgttaatgg gtggcgtact tgtgatcgtc gcgggctcac
    14761 tcttcagtct gatcgtaatg ggtggcgcgg cacgcaacct ggtcgcgcat ctgctctggg
    14821 acgagccggt cagctttcgc tcgacgtacg ccgcggtcaa atcgcgtttc tggggattgt
    14881 tgggtgcgag cattctgatc gctttgtggc ttaccttctg cgcgtggtta gccaccatgg
    14941 gctcttacct tgttttcgtg gttgtttttg taggtgtggt cgcgatcgct tcggtaatac
    15001 ccgagttcgt cacaggtatt gtggtggttt tcggggtcat cggggccctg attggcgcgc
    15061 tcgtcctgtt ctttctgttg gccggccgca tggcttacgt gccgcaggcg atgctggttg
    15121 aaggacggtc cgtgggttcg gcgatcggcc gcagcttttc gcttgccagc ggcaacgtgc
    15181 gtcgtcttat ggcgatggcg ctgtttactt tttttgcgac ctactcggcg ctcgcgcttc
    15241 tgattattcc gctcggatgg tatggctggg ccagcggcgt ggacgtttcg ccgttcggaa
    15301 gtgaatggcc ggcgtggtac gcaatcggat acgaagtcat cctgcaatgc agtcacattc
    15361 tgctggcgcc aatctggatg ctggggatgt cactgctgta cgtggacgag cgcgtgcgac
    15421 acgaaggcta cgacatcgag ttgatggcgg cgcgccagct tccgccgatg cctgagctgc
    15481 ctggtgttat gtcgccgttc gcgcccgcgt tggtcacgcg tcgcacagcg caatttgtac
    15541 cgccgcctgc gccgatgccg ccgcaaagtg ttctgggctt acactgatcg ttcgccgcag
    15601 atgcgtaccg tattccattc attaagagtc gtcgttgggg ccatgctgtt cgccctcgcc
    15661 ctctgcgtcc aggggcaagc tgcgagtttt gaagactatc gcgcccgcgt ctctcaggca
    15721 gtcagtgcta tcgaacaact cgaagctccc gattactaca cggacgatcc tttgcagcgc
    15781 gattcagtca tgcaaaacgc gctcacgcgt ttgcgacagc tgctgccggc gcatgagtca
    15841 gttctcttca acggtcagaa catcgacgtg gacaacgcgt ggttccacga ggcgctcgac
    15901 gagtatcaga aactgggcca ccagcctgag cgcgcaagtg ccgtcgtcac cagagcgcgc
    15961 gagcaactac gcgctctgct cgaacgtttg gacgagatga agtcggcaag ttcgacggac
    16021 gggaaagatg cgaataaagc gcgactggcc gaaatcctgc ggcgttccga atacgacaag
    16081 agtgtcgctg aaaaaagcgc gatcgcacgc ttgtgggagg aattcattcg ctggctctcg
    16141 aaacttattc cgaaggttgg cccactgcaa cccggcaccg gccaggcact ctcaggcgtg
    16201 gcccaggtcg tcgtaatcgg tttttccgtc ctgctaatcg cctttcttat ctggaaattt
    16261 ctgccgggct atttgcgcaa ccgcggaaat agaaagaaga aagcg
//
LOCUS       DATDBY010000659         4484 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_192316, whole genome shotgun sequence.
ACCESSION   DATDBY010000659 DATDBY010000000
VERSION     DATDBY010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4484
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192316"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3270
                     /locus_tag="VIT19_12405"
     CDS             <1..3270
                     /locus_tag="VIT19_12405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839832.1"
                     /translation="ATPAVSPSPTNSSKGKSEPTTPGTYEFASTEDLEPVPAGTVRVV
                     SPKPDSVVMAPALEVEAEVEINSTVKVEINGEEVSDKNIGKRRVDHKNKIAGFTFVGL
                     NVRPGPNKLEVTAIAANGSAGQPQEIVVMGRGPARRLEITTEKTEIQAGGSDSTIVRV
                     SAFDQWGNPALDGDVGVESSLGELVRNLEAANDKNTATSLEKNKSRAPLVLKFQGGAA
                     TVKLVSAGAPGDARLRATTGVAEAEGLVRITAELRPRMLVGMAEMSFGKGIPEVGLRR
                     EEGNFRSRLSFFYSGKLFGDNMLTLSYDSQRPINRTAGRDRLFQLDPNDRVYPLFGDS
                     STRFEAAQTNSKLYARIDRKRSYLMFGDFEADMNAPLMGYGRKLTGVKLHLENSGGDG
                     ITLTGARPDTAFARDVFPAGSLGILQLSSSEILPGSENVMFETRDRRNPEVVISRETL
                     TRGIDYNLDPVTGHLFFLRYISTFDQLLNLKQIVVTYEHRANSMNSAVYTARAQKNFK
                     SIGLKLGLSAVMQTQSNEGNFFLAGFDVEKKLPGKGSLQMAWAMSKGEVVGTGNVFNS
                     DESTHNGSAYQIALQQPLPFASAVVRGRFLSASAGFFNPFGGTVTPGSRRGEVNVEMK
                     PLANSVLRLGFTSEDNKTENVDNSRVTFSAAWEQLLHERVRLQFGFDHRAFSDDLNSR
                     KVDSNLVTAGAEVKVTDKLQLTVKREQNLGEADPSYPNQTTLGATYQMSSLTKLFFTQ
                     RLASGTITPIGDYTNTGFAFTSARRETAFGVETRFGKYTSMVGRYQLENGISGTDSFA
                     VIGLQNRLPLTKEFSLELGFERGFHLTGPNESFNSATLGFGWQPNEDFRANARYEFRN
                     RNGNGQLFAAGAAGRVQEGVTALARVQWSRGAFAQSDNSAFDATAAVAFRPLDSDRRG
                     LLFTYTHRSLNQMSVNGGKPTRDRIDSLSTDVYEQLTKRLELYGRFSLRFTGNGQADL
                     PFVSNLSYLAQARAQYQLTKRIDWAFETRALFQPSSHTMRSTYATEIGFWAFPDLRLG
                     GGYNFTAVSEPEGARVLPTRRGFYFTISTKLFNLFNLFGTSNHGLAGSGNASPVQPEK
                     K"
     gene            3291..>4484
                     /locus_tag="VIT19_12410"
     CDS             3291..>4484
                     /locus_tag="VIT19_12410"
                     /inference="COORDINATES: protein motif:HMM:TIGR01451.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839833.1"
                     /translation="MPRRPASGFLSNPVSLFAVRALVLVLFFGVWSVSAAYAQITVQP
                     TTWNVIGLDSNNVNTGPNTFPVGVRVCNTSGAPVTNVTGNFVWDTSNIYINLTGASTI
                     NVQTLAAGACTDIYFSVTITRTSAAYNATRRFHITVTGDGVSSVTTPTPREIYVEKII
                     SQNRNSVNSIIGPTTVYVGQTYQYTVNASTATGGYEQLQAFLELPNVIFQVLSIATTY
                     TAPSGGTNNKFYADACGWDNNPLSSNYRSCIGPEQYPGGKAGGTVVTTYTVKVLSTGT
                     TTAGTAIVDFSGSSYHYNSDYGDTVISITSLPPPLTLSKIANPTTPTAGSTVTYTLRA
                     TNTGSASYTLTDFVDTPPTSPATPTYVSGSSTFNGASISNPVAAGSTRTWTGSFVVPG
                     GTTRDL"
BASE COUNT          971 a         1308 c         1262 g          943 t
ORIGIN      
        1 gcgacgccag ccgtctctcc ttcgcccact aacagttcta aaggtaagtc ggaaccaacc
       61 accccgggca cctacgagtt cgcttcgacc gaagacctgg agccggttcc ggctggtact
      121 gtgcgcgtcg tttcaccgaa gccggacagc gtggtcatgg cgccggcgct ggaagtcgaa
      181 gccgaagtcg aaattaactc gacggttaaa gtcgagatca atggcgagga agtttcggac
      241 aagaacatcg gcaagcggcg agtggatcat aagaacaaga tcgcgggttt cactttcgtc
      301 ggtctcaacg tacgtcccgg accgaacaag cttgaagtga ctgcgattgc ggcaaatggt
      361 tccgccggac agccgcagga aatcgttgtg atgggtcgcg gcccggcgcg tcgtctggaa
      421 atcacgactg agaaaactga gattcaagcc ggcgggtcgg attctacgat tgtgcgcgtc
      481 agcgcgtttg accagtgggg caatcctgcg ctggatggcg acgtcggtgt ggaatcttcg
      541 cttggtgaat tagtgcgaaa cctcgaggcc gcaaacgata aaaacacggc gacatcgctc
      601 gagaaaaaca agtctcgcgc tcctttggtt ctgaaattcc agggcggcgc ggcgaccgta
      661 aagcttgtca gtgccggcgc cccgggcgac gctcggctac gcgcaactac cggggtggcg
      721 gaagctgaag gcctggtgcg catcaccgct gagctccgtc cgcgcatgct tgtcgggatg
      781 gccgagatga gtttcggcaa aggcatcccg gaagttggtt tgcgccgtga ggaaggaaac
      841 ttccgtagtc gcctcagctt cttctatagc ggcaaacttt tcggcgacaa catgctgacg
      901 ctctcgtacg attcgcagcg tccgattaat cgcaccgccg gccgtgatcg tttgttccaa
      961 ctcgatccga atgaccgcgt gtatccgcta ttcggcgatt catcgacgcg ctttgaagcc
     1021 gcccagacta attcgaagct ctacgcgcgt atcgatcgca aacggtcgta tttgatgttc
     1081 ggcgatttcg aagccgacat gaacgcgcca ctgatgggtt acggccggaa gctgaccggg
     1141 gtgaagcttc atctcgaaaa ttcaggcggc gacggcataa ctttgaccgg cgcgcgcccc
     1201 gacaccgcgt tcgcgcgcga tgtgtttccc gcgggcagcc tcggcatcct gcaactttcg
     1261 agtagtgaga ttctgccggg ttccgagaat gtcatgttcg agactcgcga ccggcgcaat
     1321 ccggaggtcg tcatctcgcg cgagacgctg acgcggggaa ttgattacaa tctcgatccg
     1381 gtgacgggtc acctcttctt cctgcgttac atttcgacat tcgatcaact gctgaacctg
     1441 aagcagatcg tcgtcactta cgagcaccgc gcgaactcaa tgaacagcgc ggtttacacg
     1501 gcgcgcgcgc aaaagaactt caaatcgatc ggattgaagc tcggtctgtc ggccgtcatg
     1561 cagacacaat ccaacgaggg aaatttcttc ctcgccggat ttgacgtgga aaagaaactg
     1621 ccgggcaaag gttcgttgca gatggcctgg gcaatgagca agggcgaagt ggtcggcacc
     1681 ggaaacgtct tcaattctga cgaatcgaca cacaacggta gtgcttatca gatcgcgttg
     1741 cagcagccgc tgcccttcgc gagcgccgtt gtacgcggcc gcttcctcag cgcgtcggcc
     1801 gggttcttca atccgttcgg cggcacggtc acccccggct cgcgtcgcgg cgaagtgaat
     1861 gtggaaatga aaccgctggc caactcagtc ctccgacttg gatttaccag cgaagacaac
     1921 aagactgaga acgtggacaa cagccgcgtg acattttctg ccgcctggga gcagctgttg
     1981 cacgagcgcg tgcggctgca attcggcttt gaccaccgcg cattttccga cgatctgaac
     2041 agccgcaagg tcgactcgaa cctggtgacg gcgggcgcgg aagtgaaggt aactgacaag
     2101 ctgcaattga ctgtgaagcg cgaacaaaac ctcggtgagg ccgatccgag ctatcccaac
     2161 cagacgactc tcggcgcgac gtatcagatg agctcgttaa caaagttgtt cttcacgcag
     2221 agacttgctt cgggaaccat cacgccgatt ggcgattaca cgaacaccgg ttttgctttc
     2281 acctcggccc gtcgcgagac ggcgttcggc gtcgaaacgc ggttcggcaa gtacacttcg
     2341 atggtcggcc ggtatcaact ggagaatggc atcagcggca ccgacagttt cgcggtgatt
     2401 ggattgcaaa atcgtctgcc gctgacgaaa gagttctcac tcgagctcgg ttttgagcgt
     2461 ggcttccatc tcactggccc gaatgaaagc ttcaacagcg cgacgctggg ttttggctgg
     2521 cagccgaacg aagacttccg cgccaacgcg cgttatgaat ttcggaatcg caacggcaac
     2581 ggtcagttgt ttgcggcagg tgcggccggc cgcgtgcagg aaggcgttac tgcgctcgca
     2641 cgtgttcagt ggtcacgcgg cgcatttgcc cagagcgaca actcggcctt tgatgccacc
     2701 gcggccgtgg cgtttcgtcc cctcgattcg gatcgccgcg gattgctgtt cacctacacg
     2761 catcgatctc taaaccagat gtcggttaac ggtggcaagc cgacgcgtga tcgaatcgac
     2821 tcgctttcga ctgacgttta cgagcaactg acaaagcgtc tcgaactgta tggccggttc
     2881 tcgctacgct tcaccggcaa cggccaggca gaccttccgt tcgtttcgaa cctctcgtac
     2941 ctggcgcagg cgcgcgcgca gtatcaactt acgaaacgga ttgattgggc ctttgaaact
     3001 cgcgcgctgt tccagccgtc ttcccacacg atgcgctcga cctacgccac cgaaataggc
     3061 ttctgggcct ttcctgattt gcggttgggc ggcggctaca acttcaccgc cgtcagcgaa
     3121 cccgaaggcg cgcgcgtatt gcctacgcgg cgtggcttct acttcacgat cagcacgaag
     3181 cttttcaacc tgttcaattt attcgggact tccaatcacg ggttggcggg tagcggcaac
     3241 gcctctccgg tgcagcctga gaagaagtaa cgcctcccgg atactttcaa atgccaagac
     3301 gaccagcatc gggattttta agcaaccctg tcagcctatt tgctgtccgg gcgttggtgc
     3361 tcgtgttgtt tttcggagtt tggtctgtaa gcgccgcgta cgcgcagata accgttcaac
     3421 caacgacatg gaatgtcatc ggtctggata gcaataacgt gaatacgggc cccaacacat
     3481 tcccggtagg cgtgcgcgtt tgcaatacca gtggcgcgcc cgtgaccaac gttacgggca
     3541 attttgtttg ggacaccagt aacatctaca taaaccttac cggggcaagc accatcaacg
     3601 tgcaaacgct cgcggccggc gcgtgtacag acatctattt ctcagtcacc atcacgcgca
     3661 ccagcgctgc atataatgcg acacgcagat ttcacatcac ggttacgggc gacggcgttt
     3721 cttcggtaac cacgccgacg ccgcgggaaa tctatgtaga gaagataatt tcgcagaacc
     3781 gaaattccgt aaattccatc atcgggccga ccacagtcta cgtcggtcaa acctaccagt
     3841 acacggtgaa cgcgagcact gcgaccggtg ggtacgaaca acttcaggcc tttcttgagc
     3901 tgccgaatgt catctttcag gtgctatcaa ttgctactac ttacaccgcc ccgagtggcg
     3961 ggaccaacaa taagttctat gccgatgctt gcggttggga caataacccg ctgagctcga
     4021 attaccgtag ttgcattggc ccggagcaat atccgggcgg gaaagccggc ggcactgtag
     4081 tgaccactta cacggtcaag gtcctatcga ccggcacgac cacagcgggc accgcaatcg
     4141 tcgacttctc gggaagcagt taccactaca acagtgatta cggagacacg gttatttcga
     4201 tcacctcgct tcctcctccg ctcacgttaa gcaagattgc caatccgacc accccgaccg
     4261 ccggatcgac agttacctac acactccgcg ccaccaatac tggctcagcc agttacacac
     4321 tgaccgattt cgttgacact ccacccacca gcccggcgac gccgacttat gtttcgggct
     4381 cttcaacttt caatggcgct tcgatttcca atccggtggc ggcaggttcg acgcggacat
     4441 ggactggcag ttttgtggtg ccggggggga caacccgaga cctt
//
LOCUS       DATDBY010000660         3182 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2931695, whole genome shotgun sequence.
ACCESSION   DATDBY010000660 DATDBY010000000
VERSION     DATDBY010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3182
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2931695"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1663
                     /gene="dnaG"
                     /locus_tag="VIT19_12415"
     CDS             <1..1663
                     /gene="dnaG"
                     /locus_tag="VIT19_12415"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEY5839834.1"
                     /translation="KEIFYCFGCQKGGSVFNFVMEIERVTFPEAIKIVADKSGVPLPK
                     MIDDGRFEARKRDSDEVIELNQWALQWWQDQLQSKAATSVRQYLKQRGLTEETTATFK
                     LGFAPDSWEALSTHLRQKGATQEQLERSGLVVKKDDGGSYDRFRGRLMFPVFDAQGKP
                     IAFGGRTLDPEGEPKYLNSPETSVYTKGRHLFGLHLTRDEIRRNEFCILVEGYLDLIV
                     PYQFGVKNLAASLGTALTPEQVKLIGRFARKVVVNYDGDRAGVQAAKRAIETLLAEDL
                     EVKVLVLPDNADPDDFIRKYGVTEYQQRRGKAQPHIQFVIDQAVRDRNLHNPADKAAA
                     VEETLPFVRAVRSRIQRREYFDIAMDALRVQMDQRRELWQRIRGTASDDGSRQAGIQP
                     VVIRQLKPTVAEQKLLELLLASEELRKIVLSRLEPSDYDGIATAPIFGALVKLNEDEG
                     EVNFDSLSAETPDDAATGELLARLMIAEPIESFDEALTHADSCLNALRLMKLDREIDE
                     LSSQVAEAERAGEAEKRDSLVMKKHELSKQRGNFLPAAQVSKSVH"
     gene            1716..>3182
                     /locus_tag="VIT19_12420"
     CDS             1716..>3182
                     /locus_tag="VIT19_12420"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5839835.1"
                     /translation="MASEEKDRDDVMDRLLQLGGDKKFLSYDDLNRELPENVVSPDDI
                     EDVLQKLDASNIHVADSDERLIEQAAAIATEEDESDEDLELDLSAGALEKTNDPVRLY
                     LREMGVVPLLTREGEVAIAKRIERGLMKTHKSIARSPIAVMELLKVGEELAEFKINIR
                     EVVLFSEQAELAGEDDKAEEYREWTIDGIEGIRKLFKNALKEYAKLKAETKAQRGKKT
                     KKVLRLRGRVGRLRIEIADEVARLNMTERSRQRLINAIRNVQKEVRSAERELSTYTER
                     LNSKKRLKADDQKAYKAHVANAKKRLRTVEEEFHIAPVDVKRSLQNIVTGEQHTGQAK
                     RELVEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEWRRGYKFSTYATWW
                     IRQAITRAIADQARTIRIPVHMIETINKLIRTSRALVQELGREPTSEEIAKKMDIPVS
                     KVRKVLKIAQEPISLETPIGEEEDSHLGDFIEDKSILNP"
BASE COUNT          789 a          801 c          985 g          607 t
ORIGIN      
        1 gaaagaaatt ttctactgct tcggttgcca gaagggcggc tcagttttca acttcgtgat
       61 ggagatcgag cgagtcactt ttcccgaagc gatcaagatc gttgccgata aatccggcgt
      121 gccgctgccg aagatgatcg acgacggccg gttcgaagcg cgtaagcgcg attcggatga
      181 ggtcatcgaa cttaatcagt gggcgctgca atggtggcag gatcaactcc agagcaaagc
      241 ggcgacctcc gtgcggcagt atctgaagca gcgcggcctg acggaagaaa cgacggcgac
      301 cttcaagctc ggatttgcac ccgacagttg ggaagccctt tcaacccatc tgcgccaaaa
      361 aggtgcgacg caggagcaac ttgaacgcag cgggctcgtc gtgaaaaagg atgacggcgg
      421 atcctatgac cgttttcgcg ggcgactaat gttcccggtg ttcgacgcgc aggggaagcc
      481 aatagctttt ggggggcgga cgctggatcc cgaaggcgaa cccaagtatc tcaactcgcc
      541 ggaaacgtcc gtctacacca aaggccgcca tctcttcggc ttacacctga cccgagacga
      601 aatcaggcga aatgagttct gcattctggt cgagggctac ctggatctca tcgtccctta
      661 ccagtttggg gtcaagaatt tagcggcgag tctaggaacc gcgctgacgc ctgagcaagt
      721 gaaactgatt ggtcgctttg cgcgtaaggt ggtggtgaac tatgatggtg atcgagcggg
      781 tgtgcaggca gcgaagcgag cgatagaaac tcttctggca gaagaccttg aggtcaaggt
      841 gttggtgctc ccggacaacg ccgatcctga cgatttcatc agaaaatacg gcgtcacgga
      901 gtatcagcag cggcgaggca aagcacagcc ccatatacaa ttcgtgatcg atcaagcggt
      961 acgggatcgt aacctccata acccggcgga caaggctgcg gcggtggagg agacgctccc
     1021 gtttgtgcgc gctgtgcgca gccggattca gcggcgcgag tattttgaca ttgcgatgga
     1081 cgcgctgcgg gtgcaaatgg atcagcggcg cgagctttgg cagagaatac gcggcaccgc
     1141 aagtgatgac ggatcccgac aagccgggat tcagccggtg gttatccgac agctgaagcc
     1201 gacggttgcg gaacaaaagc tcctggagct gctgctggca agtgaagagt tgcgaaagat
     1261 tgtcctgtca cggctcgaac cgagtgatta cgacgggatt gcgacggcgc caatttttgg
     1321 cgcgctggtc aagctgaacg aggacgaagg cgaagtcaac tttgattcgt tgagtgccga
     1381 aacaccggac gacgctgcga cgggcgagtt attggcgcgt ttgatgatcg ccgagcccat
     1441 tgagtcgttc gatgaagcat tgacgcacgc tgacagttgt ctgaatgcgc tgcggctgat
     1501 gaagctggat cgggagatcg acgaacttag ttcgcaagtc gccgaagcgg aacgcgcggg
     1561 tgaagccgag aaacgcgata gtctggtaat gaagaaacac gaactatcaa aacagcgcgg
     1621 caactttttg ccggcggcgc aggttagtaa atcggtgcat tgagttaatc gagccgcacg
     1681 ggcggcgtat tgtcagtacg aggaaataaa caatcgtggc tagtgaagaa aaagatcgag
     1741 acgatgtgat ggatcgcctg ctccagttgg gcggcgacaa gaaatttctg tcttacgacg
     1801 atttgaatcg tgagctgccc gagaatgtgg tctcgccgga cgatatcgaa gacgtgctgc
     1861 agaagctcga cgcttcaaac attcatgtcg ccgattccga cgagcgtttg atcgagcagg
     1921 ccgcggccat cgcgactgaa gaagacgaga gcgacgagga tctggaactg gatctttccg
     1981 cgggcgcgct tgagaaaact aacgatccgg ttcgtctgta tctgcgcgaa atgggcgtgg
     2041 tgccgctgct tactcgcgaa ggtgaagtcg ccatcgcgaa acgcatcgag cgcggcttga
     2101 tgaagacgca caagtcgatt gcgcggtcgc ccattgccgt catggagctt ttgaaggtcg
     2161 gcgaagagct ggcggaattc aagatcaaca ttcgtgaggt cgtgcttttt tctgagcagg
     2221 cggaactcgc cggtgaagac gacaaggccg aagagtatcg cgagtggacg atcgacggca
     2281 tcgagggtat tcgcaagctc tttaaaaacg cgctgaaaga gtacgcaaag ctgaaggccg
     2341 aaacgaaagc gcagcgcggc aagaagacga agaaggtcct gcgtttgcgc gggcgcgttg
     2401 gacgtctgcg aattgagatt gctgacgaag ttgcccgtct gaatatgacg gaacgatccc
     2461 ggcaacggct gatcaacgcg attcgcaacg tgcagaaaga agtgcgttca gccgagcgcg
     2521 agctttcaac ctacactgaa agacttaact cgaagaagcg actcaaggct gacgatcaga
     2581 aggcttacaa ggcgcacgtt gcgaacgcga agaaacgcct gcgcaccgtt gaagaggagt
     2641 tccacatcgc tcccgtcgac gtgaagcgtt cactgcaaaa catcgtcacc ggcgaacaac
     2701 atacgggtca ggccaagcgc gaactggtcg aagcgaacct gcggctggtt gtttcaattg
     2761 cgaagaagta cacaaaccgt ggattgcaat tcctcgatct gattcaggaa ggcaacatcg
     2821 gcttgatgaa ggccgtggat aaattcgagt ggcggcgtgg ctacaaattc tcgacgtacg
     2881 caacgtggtg gattcgccag gcaatcaccc gtgcgatcgc cgatcaggcg cgcacgatcc
     2941 gcatccccgt gcacatgatc gagaccatca acaagctgat tcgcacttcg cgcgcgctgg
     3001 tgcaggaact ggggcgcgag ccaaccagcg aagagatcgc gaagaagatg gacattccgg
     3061 tttccaaggt gcgcaaggtc ctgaagattg cgcaggaacc gatctcgctt gagacgccaa
     3121 ttggtgaaga ggaagactcg cacctcggcg acttcatcga agacaaatcc atcctgaacc
     3181 cc
//
LOCUS       DATDBY010000661         3165 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_2705061, whole genome shotgun sequence.
ACCESSION   DATDBY010000661 DATDBY010000000
VERSION     DATDBY010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 3165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3165
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2705061"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1050)
                     /locus_tag="VIT19_12425"
     CDS             complement(<1..1050)
                     /locus_tag="VIT19_12425"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5839836.1"
                     /translation="MNARVVAAIARKDIVDAVRNRYLLFALLTPLMVAIALRLLQPGI
                     DSLTRMTVVVHDPGKSKMISELRAAPRMNLIEAISAEAVPAKVEKNKATGGLALPATF
                     DADIAAGKQPPLTIYLNQTNGAIRQAGFRQLVERMVMSLREQPPPVSAVWIDVGKAEE
                     RAAPGVFNLDQMLLPLLLLLNFAMAGALVVPLLLVEEKEKYTLDFLLTSPASQFEIIA
                     GKALTGILYSALIAGLLLILNQRLIKNWPLTLLTVFLGLLLVVGVGLLMGALFKNSMQ
                     VNTWASGVLLLLMAPSFPSMGMPAAVESAARLIPTHYFVEALRLASAGTNSVRLWWHL
                     AAVLGFTLLAFFAATW"
     gene            complement(1047..1895)
                     /locus_tag="VIT19_12430"
     CDS             complement(1047..1895)
                     /locus_tag="VIT19_12430"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5839837.1"
                     /translation="MNAIDVNGLTRTFNDLRAVDNISFAVEAGEVFGFLGHNGAGKTT
                     TIRMLTGQLRPTAGRAQVAGCDTATEQQRLKPLIGVVSEHQNLYERMSGRENVAFAAQ
                     LYGVENRRVDEVLNQVGMTDRAGDKVQNYSNGMKQRVLIARALLHQPQIIFLDEPTRG
                     LDPVVARDIRRLILDLAVQGVTVFLTTHYMEEADQLCRRVAFISEGRIVALDTPDNLK
                     LAHGERTVAATLADGERVTISLDDQDAGKQLERLVSSGQIRTLHSAEATLEEVFIEMT
                     GRKLSE"
     gene            complement(1919..2395)
                     /locus_tag="VIT19_12435"
     CDS             complement(1919..2395)
                     /locus_tag="VIT19_12435"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY5839838.1"
                     /translation="MMKRLFSFVILTLATALTVHAQTAPASAELTKLLNDFLAGASTN
                     DAAMHDRFWAEDVIYTGSGGRRRGKADIMKDVRSAPAPKPGDAKTIYTAEDVRIQQYG
                     GFAIVAFRLVATTEKDGKTDVAKYLNTGTFLKRKGKWVVVSWQATKAAPEVENTNR"
     gene            complement(2737..3153)
                     /locus_tag="VIT19_12440"
     CDS             complement(2737..3153)
                     /locus_tag="VIT19_12440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839839.1"
                     /translation="MNQATSQTRPFAAVALILIHLVVSILHGWAHQGAMVTLTTFGNV
                     YVAVVITLMPVVAAAFLFTRKKKIGALLLALSMLGSFIFGVWYHFLSQTNDNVTQVHG
                     PWHSTFLWTAIALAVIEIAGVIVGFWMFRASSEPAR"
BASE COUNT          697 a          911 c          901 g          656 t
ORIGIN      
        1 ccaggtcgcg gcaaaaaaag ccagcagcgt aaaacctaac acggcggcca ggtgccacca
       61 caatcgaact gaattggtgc cggccgatgc caatcgcaac gcttcgacaa aataatgcgt
      121 cgggatcaaa cgggccgctg attccacggc agcgggcatg cccattgaag gaaagctggg
      181 cgccattagc agaagcagca ccccgctcgc ccaggtgttc acctgcattg aattcttaaa
      241 gagagcgccc atcaacaagc cgacgccaac caccaacagc aatcccagga acacggtgag
      301 cagagtgagc ggccagttct taatcagtct ctgattgagg atcaacaaca gtccggctat
      361 caacgcactg tagaggatgc cggtcaaagc ctttcccgcg attatctcaa actggctggc
      421 tggcgaagtt agcaaaaaat cgagagtgta tttttccttc tcttcaacca ggaggagcgg
      481 gacgaccaac gcgccggcca tcgcgaagtt caataacagc aataacggca atagcatttg
      541 gtccaggttg aagacgcctg gggccgcacg ctcctcggct ttacccacat caatccaaac
      601 tgcgctgacc ggcggcggct gttcccggag cgacatcacc atcctttcga ccagctgcct
      661 gaacccggcc tgtcgaatag cgccgttagt ttggttgaga tagatggtga gcggcggttg
      721 tttgcccgcg gcgatgtcgg catcgaaagt ggccggcaag gcgagcccgc cggtggcttt
      781 atttttctcg accttagccg gcacggcctc cgccgagatg gcttcgatca gattcatccg
      841 gggcgcggcg cgcaactcag aaatcatttt tgatttgccg ggatcgtgga ccacgactgt
      901 catccgggtg agactatcga tgccgggctg gagcaagcgc agcgcgatgg ccaccatcaa
      961 aggcgtcagt aacgcgaaca gcagatagcg gttgcgaacc gcatccacaa tgtccttgcg
     1021 cgcaatggca gctacgactc tggcgttcat tcagacagct tccttccggt catctcgatg
     1081 aagacttctt ccagagtggc ttcggctgaa tgcagcgtgc gaatttgtcc ggagcttacc
     1141 agtcgttcaa gttgctttcc ggcatcttga tcatccaaag agatcgtcac gcgctcgcca
     1201 tcggcaaggg tcgcggcgac cgtgcgttct ccgtgggcta gcttcaaatt gtccggcgta
     1261 tccagagcga cgatccggcc ctcgctgatg aacgcgacgc gccggcaaag ctggtccgct
     1321 tcttccatgt agtgcgtggt gagaaagacc gtcacgcctt ggacggcgag atcgaggatc
     1381 aggcgacgaa tgtcacgcgc gacaaccgga tccaggcccc tggtcggttc gtcgagaaaa
     1441 attatttgcg gctgatggag cagagcgcgc gcaatcagta cccgctgctt cattccgttg
     1501 gaataattct ggaccttgtc accggccctg tcagtcatgc cgacctgatt cagcacctcg
     1561 tcaacccgtc tgttctcgac accgtagagt tgcgcggcga aagcaacgtt ctctctgccg
     1621 gacatgcgct cgtagagatt ttgatgttcc gagacaactc cgatgagggg cttgaggcgt
     1681 tgctgttcgg tggcagtgtc gcaaccggct acttgcgccc ggccggcagt tgggcgcaac
     1741 tgcccggtga gcatgcggat ggtagttgtt ttgccggcgc cgttgtgccc caggaagccg
     1801 aagacttcgc cggcttcgac cgcaaaagaa atgttgtcca cggcgcgcag atcgttgaag
     1861 gtgcgcgtga ggccgtttac atcgattgcg ttcatagcga ttctgttgga gggctgttct
     1921 agcggtttgt gttctcgact tcgggcgccg ccttcgtcgc ttgccagctt acgaccaccc
     1981 acttaccttt gcgttttaga aaggtgccgg tgttcaagta cttcgccaca tctgtcttcc
     2041 cgtccttctc agtagtggca accaggcgaa acgcaacgat tgcaaaaccg ccgtattgct
     2101 gaatccgaac atcttcagcc gtgtaaatcg tctttgcatc gccgggcttt ggcgccggcg
     2161 ccgaacgcac atccttcatg atgtccgctt tgccgcgccg ccgtccgccc gacccggtgt
     2221 aaatcacatc ctcagcccag aaccgatcat gcatcgctgc gtcgttggtt gaagctccgg
     2281 cgagaaaatc attcaggagc ttcgtcagct ccgccgaagc gggcgccgtt tgggcgtgaa
     2341 cggttaacgc ggtggccagg gtgagaatca caaacgagaa aagtctcttc atcatcttct
     2401 cctcaagaca cggttgctga taattcgtga aaggtaacga gaaagaggat cgtggtcaat
     2461 gcccgttgcc ggccggggca gtaacccgat tgtgatggag ggcggcggct ttcgtccgcg
     2521 ttagcggacg tttgaaagta gcccagcgct tcagcgctgg gaaaacaatc ccgacaaaaa
     2581 atcaaaagcc cgctttagcg agcgacagaa atttggagtg cggtggcaag cgtcggcgcg
     2641 acaccgcttt ggattcgccg actgcgctca ttcagcgtcc aaccaaagcg tcgtcgccgc
     2701 ttcgcgctgc cggcgcactc caaatgagtg accctcttat cgcgcgggct ctgagctcgc
     2761 ccgaaacatc caaaacccaa cgatcactcc ggcgatttca atgactgcga gcgcgatggc
     2821 tgtccaaaga aacgttgaat gccagggccc gtgtacctga gtgacgttgt cgttggtctg
     2881 ggaaagaaag tgataccaga cgccgaagat gaaactgccc agcatcgaga gcgcgagtag
     2941 aagcgctcct atcttcttct ttcgcgtaaa caggaacgcc gccgctacca ccggcataag
     3001 cgttatgacg acggcaacat agacgttgcc gaaagtcgtg agcgtcacca tcgccccctg
     3061 atgcgcccag ccgtgaagga tggaaacgac aagatggatc aggatcaagg cgactgcggc
     3121 gaacgggcgt gtctgtgaag ttgcttgatt catgaatcag ctgac
//
LOCUS       DATDBY010000662         2178 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1922478, whole genome shotgun sequence.
ACCESSION   DATDBY010000662 DATDBY010000000
VERSION     DATDBY010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1922478"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VIT19_12445"
     CDS             complement(<1..346)
                     /locus_tag="VIT19_12445"
                     /inference="COORDINATES: protein motif:HMM:NF024143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HEY5839840.1"
                     /translation="MGNDRDYGDGISTRLTYFLVGAGIGAVMALLFAPKSGEELRSDI
                     ADATRKGIDKSKEAAQQLGTKATELYGTARETAGEYYEATRERATDLYDTASAKAGEV
                     VAKTKDTVSSQAG"
     gene            complement(530..1063)
                     /locus_tag="VIT19_12450"
     CDS             complement(530..1063)
                     /locus_tag="VIT19_12450"
                     /inference="COORDINATES: protein motif:HMM:NF024822.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4112 domain-containing protein"
                     /protein_id="HEY5839841.1"
                     /translation="MTTQAQLEPVTSRRQVLRPTTIQVERELEVFSQFMDNQFRVPVL
                     GWRFGLNAILDLVPGIGDVATSIIALYLLVSAVRYRVPKITLLRMALNIAIYFIVGLV
                     PLAGDLFAIWWKPNIRNVNLLRARATVSPTDLHQGRVTDWLFVGGVAAFLLTLLFGSI
                     ILAATVIWFISTRLQFM"
     gene            complement(1179..>2178)
                     /locus_tag="VIT19_12455"
     CDS             complement(1179..>2178)
                     /locus_tag="VIT19_12455"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HEY5839842.1"
                     /translation="DGRTATTFSAESLRDFVVVAGSNMRAEQRVISGITIRSIYRNEH
                     ETAARRALNIAADAVNVYVRRIGPLPLRTISLVDAPLVATLSNAEFSGFVAIASAFYL
                     DFDSPSVSGMPDIIREQRASVEESLEWTVAHVVAHQWWGTAVGNDPSREPVLDEALAN
                     WSALLYYREVHGEKKAEVALEEQLRGVYKLYRTFGGEDMEANRAAREYRNSFQYAAIV
                     IGKGALMFEALRKMIGDEKFFAALTKYYAANRFEIAQMDDLRGAVVGEASVEQRRTVS
                     RTFDRWLSSKNGDEDIAPPDPKLAAELGLPVKDPKTGGNVFSRVGRFFWQQMTRIR"
BASE COUNT          484 a          656 c          579 g          459 t
ORIGIN      
        1 aacccgcctg cgacgacacg gtgtccttcg tcttggctac gacttcgccg gccttcgccg
       61 atgcggtgtc atacaagtca gtcgcgcgtt cgcgggtcgc ttcgtagtac tcgccggcgg
      121 tttcgcgcgc ggtgccgtac agctcagtcg ccttggtgcc aagttgttga gcggcctctt
      181 tcgatttgtc gatgcctttg cgtgtcgcgt cggcgatgtc gctgcgcagc tcttcacctg
      241 acttcggcgc aaacagcagc gccatgaccg cgccgatgcc cgcccccacc aggaaatacg
      301 ttaatcgagt cgaaattccg tccccatagt cacgatcgtt acccataaca atatcctttc
      361 tagagaggcg aatcccttcg gaatccacca gtaaattcaa gttttttgga tgatggctgc
      421 tcgcgactat aacaaagccg cgaaggctgc gcaaggaagt gccccccttt cgggcacgca
      481 cgcctccggt gtgctgcacg cgagacgtgc gcgtaccacg cgtaccgctc tacatgaatt
      541 gtaagcgcgt gctgatgaac cagatgacag tcgcggcaag aatgatcgag ccgaacagca
      601 gcgttaggag aaacgccgcg acgccgccca caaacagcca gtcggtgacg cgaccttgat
      661 gcaaatccgt aggcgaaact gtcgcgcggg cgcgcagcaa attcacattg cgaatgttcg
      721 gcttccacca aatcgcgaag aggtcgccgg ccaggggtac aagaccgacg atgaaataga
      781 tggcaatgtt aagcgccatc cgcagcagcg taatctttgg cacccgataa cggaccgcgg
      841 aaaccagaag gtagagtgcg atgatcgaag tcgccacgtc tccaatgccc gggaccagat
      901 cgaggattgc attcaagcca aaccgccaac ccagtacggg cacccgaaac tggttgtcca
      961 tgaactgact gaagacttcc agctcacgct cgacttggat cgttgtggga cgaagaacct
     1021 gacgccgcga agtgactggt tccaattgcg cttgagtagt catttgtact ttgtactttg
     1081 tgctttgtgc tttgacgtga gattcaggag gcctttagaa atccagagaa ccttgccagg
     1141 gaggaactaa gaacgaagta caaagcacaa agtacgcttt atctaatcct ggtcatctgc
     1201 tgccaaaaaa atctgccgac gcgagagaat acgttgccgc ccgttttcgg atctttcacc
     1261 ggcaaaccta actcagcggc gagttttgga tccggcggcg caatgtcttc atcaccattc
     1321 ttactcgaca accaacgatc aaaagtacgg ctgacggttc gtctttgttc taccgaagct
     1381 tcgccaacga ctgcgccgcg caaatcgtcc atttgcgcga tttcaaatct gtttgcggcg
     1441 taatacttag tcagcgcggc aaaaaacttc tcgtcgccaa tcattttccg cagcgcttca
     1501 aacatcagcg cgcctttacc gataacaatt gctgcgtatt ggaacgaatt ccggtactcg
     1561 cgcgccgcgc gattcgcctc catatcttcg ccgccaaaag tccgatagag cttgtaaacg
     1621 ccgcgcagtt gctcctccaa cgcgacttca gctttctttt caccatgaac ttcgcggtag
     1681 taaagcagag ccgaccagtt ggccagcgct tcatcgagca ccggctcgcg gcttggatcg
     1741 ttaccgacgg ccgtccccca ccattgatgc gcgacgacat gcgcgacggt ccattccaga
     1801 ctctcttcta ctgacgcccg ctgttcgcga atgatatccg gcatgccgct cacgctcggc
     1861 gaatcgaaat ccaggtaaaa agcgctggcg attgccacga agccagagaa ctccgcgttg
     1921 ctcagcgtgg ctaccagcgg cgcgtcaacc aggctaatcg tccgcagcgg caacgggccg
     1981 atgcgccgga catacacgtt gaccgcgtca gccgcgatgt tcagggcccg tcgcgcagcc
     2041 gtttcgtgct cgttgcgata gatcgaacga atcgtgatgc cgctgatgac gcgctgctcg
     2101 gcgcgcatgt tgctgccggc gacgacgaca aagtcacgca ggctctcggc ggaaaacgtc
     2161 gtggctgttc gtccatcc
//
LOCUS       DATDBY010000663         2915 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_1306886, whole genome shotgun sequence.
ACCESSION   DATDBY010000663 DATDBY010000000
VERSION     DATDBY010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2915
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1306886"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VIT19_12460"
     CDS             complement(<1..524)
                     /locus_tag="VIT19_12460"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEY5839843.1"
                     /translation="MFSSSNWRLASIRILLVGLSIISCVSLAMAQSQSNAADLQGYVR
                     DPNGAVVVGATITARNPATNFSRSTASNDEGYYQLVSLPPGDYEVSVEAPNYKKAVVP
                     TYKLTVGARADLDVTLELGQVTEVVNVTADSQPMVETTRTTVANTIDSARIENLPINQ
                     RDYLGFSTTISTVNR"
     gene            complement(830..2029)
                     /locus_tag="VIT19_12465"
     CDS             complement(830..2029)
                     /locus_tag="VIT19_12465"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY5839844.1"
                     /translation="MNKAHNYDVIIAGGGPAGSSAAIHLALRGARVLLAEQKKFPRPK
                     LCGEFISPECITQFEQLGVTDQMLASSPSPLTETVFYSQAGASVSVPSDWFRKGGVAL
                     GLSRAEMDERLLRRAAEVGVDVREETSVTSLNFENERVAGVNLKTHNSEEPVSALITI
                     DATGRSRMLARMAEKPGSGRSQQRELVAFKAHLRNTGVAHGACEIYFYRGGYGGLSSI
                     ENGLSNLCFIVNARDVRGCQSNADRVVRSIVCRNQRAAHTLREAVLNSDWLAVSLEGF
                     GRHSPSPVDGLLTIGDAASFIDPFTGSGMLMALESGELVANHIMRRLPQLNELQFQTL
                     SEQYRAAYERQFNSRLRLCSLIRRAAFAPGVADFAIRLFGASDTLRRRVARATRSQPK
                     RNFSSAR"
     gene            complement(2022..2765)
                     /locus_tag="VIT19_12470"
     CDS             complement(2022..2765)
                     /locus_tag="VIT19_12470"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY5839845.1"
                     /translation="MFEKFRQRSLEPENLDKGTYTPEEYEGCLVELRRINRWLGDAKT
                     LQDLFLTEIEERDLQSFSVLDVGAGSGELLRVAAKWSRETNRTARLVGLELNQRSAKS
                     ILEVSREFPEIDSVRGDGLRLPFADCAFDYTIQSLTLHHFDDEGAVNLLREMGRVAVR
                     GVFVIDLHRSRMAYFFYTTLGKLFLHNRLIREDGALSILKGWKADELESLGRKAGMQN
                     VKVQEHFPARLVLTGVASPPPSGRGKSHE"
BASE COUNT          658 a          848 c          788 g          621 t
ORIGIN      
        1 cggttgacgg ttgaaatcgt agttgagaag ccaagatagt cgcgctgatt aatcggcaag
       61 ttctcaattc gcgcgctgtc aatagtgttc gcgaccgtgg ttcgagtggt ttcaaccatt
      121 ggctgactat cagccgtgac atttacgacc tcggtaacct ggccgagctc aagcgtcaca
      181 tccaaatctg cccgtgctcc gacagtgagc ttataagtcg gcaccactgc tttcttgtag
      241 ttcggagctt ccacagaaac ttcgtagtca ccgggcggca agctcaccaa ttggtaataa
      301 ccttcgtcgt tgctggcggt tgagcgcgaa aagttggtgg ccgggttccg cgctgtaatg
      361 gtagcgccaa ccacaaccgc gccgttcggg tcgcgcacat aaccctgcaa atcagccgcg
      421 tttgactggg attgcgccat cgcgagactt acacaggaaa tgattgagag accaaccaac
      481 agaatccgga tcgacgccag gcgccagtta ctggaagaaa acatttgcgg ttctccttct
      541 tcgtttacga agtcgtgtcg aagctgactg aatcaaatat gaaaactttg agagctattg
      601 gtttcaagcg cgcggctctg gggcaatggc tccgcgctca gaacactgcg aaacagcaag
      661 tgccgcaatc ggcgaatctc actcgcagca gatacatgcg cgctgttttt accccaaaac
      721 tgcgattgtg gcaaggcttt agtgctgaat ccccttggct gcattccacg tggagcgcgc
      781 atcctgcgcg tcatttcacg ggcgggacgc ccgtgccact ctatttaaac taccgggccg
      841 acgagaagtt tcgtttcggc tgcgagcggg tggcgcgggc gactcgcctt cgcaaggtgt
      901 cactcgcgcc gaaaagacgg atcgcgaaat cggcgacccc cggcgcgaag gccgcccggc
      961 gaatcagtga gcacaggcgc aggcgcgagt tgaactgccg ctcatacgct gcgcgatact
     1021 gttcagacaa cgtttgaaac tgaagttcat tcagttgcgg caggcgccgc atgatgtggt
     1081 tcgcgacgag ttcgccactt tctagtgcca tcaacatccc gctgccggta aacggatcga
     1141 tgaatgaagc agcatcgccg attgtaagta gcccatcgac cggcgacggc gaatggcgac
     1201 caaaaccttc gagtgaaaca gccagccaat cggagttgag cacggcttcg cgcagtgtgt
     1261 gggcggcgcg ttgattgcga cagacgatgg aacgcacaac gcgatccgca ttcgattggc
     1321 acccgcgtac gtcacgcgca ttgacgataa aacacagatt gctcaaaccg ttttcgatgg
     1381 agctgagtcc gccgtaaccg ccgcgataaa agtagatttc gcatgcgccg tgcgcgaccc
     1441 ctgtatttcg aagatgcgct ttgaaagcaa ccagctcgcg ctgttgagaa cgcccggagc
     1501 cgggtttttc cgccatgcgg gccaacattc gcgagcgacc agtggcgtca atcgtaatca
     1561 gcgcgctcac tggttcttca gagttgtgag ttttcagatt cactccagcg acccgctcgt
     1621 tctcaaagtt caaactggta acggaagtct cctcccgaac atcgacgccg acttcggcag
     1681 cgcgtcgcaa cagccgctcg tccatctccg cgcgactcag ccccagcgca acgccgcctt
     1741 ttcggaacca gtcactggga acggaaacgc tggcaccggc ctgcgaataa aaaactgttt
     1801 cggttaaggg cgaggggcta ctcgccagca tttgatccgt cacgccgagc tgttcgaact
     1861 gcgtgataca ttccggcgag atgaattcgc cgcacaattt cggtcgggga aatttctttt
     1921 gttcggcgag taggacgcgg gcgcctcgca gcgccagatg aatcgccgcg ctcgagcccg
     1981 ccggtccccc accggcgatg attacgtcgt agttgtgagc cttattcatg agatttccct
     2041 ctcccagagg gagggggaga ggcaaccccc gtcaaaacca aacgggccgg aaaatgctct
     2101 tgaactttca cgttctgcat tccggctttg cgtccgagcg attccaactc atcagccttc
     2161 caacctttca gaatcgacaa cgcgccgtct tcccgtatca aacggttgtg cagaaacagt
     2221 ttacccagag ttgtgtaaaa gaagtacgcc atccgagatc gatgaagatc gatgacaaac
     2281 accccacgta cggccacccg tcccatttcg cgtaacagat tgacggcgcc ttcgtcgtca
     2341 aagtggtgca gcgtgagcga ctgaatcgtg taatcaaacg cgcagtcggc gaatgggagc
     2401 cgcaagccat ccccgcgaac ggaatcaatt tcggggaact ctcgcgacac ttcgaggatc
     2461 gacttcgccg agcgctggtt cagttcgagc ccgaccagcc gcgctgtgcg attcgtttcc
     2521 cgtgaccatt ttgccgcgac ccgcagcaac tcgcctgagc ccgcgcccac atccaagacc
     2581 gagaacgatt gcaggtctcg ttcttcgatt tccgtcagaa acaaatcctg cagagtcttc
     2641 gcatcgccaa gccaacggtt tatccgccgc agctcaacca gacagccttc atactcttca
     2701 ggcgtgtacg tgcctttgtc caggttttca ggttcgagac tgcgctgacg aaacttttcg
     2761 aacattgatt acgggaaagc tatgcgtatt cgcgtgttat aatggcggca acatggccgt
     2821 taaagctagt gaaatccgcg ttcggaaact tcacgatcgg gatcgttccg accaggacga
     2881 tttttcccgc actacggcag ccgaacgttt gcaaa
//
LOCUS       DATDBY010000664         2277 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_821855, whole genome shotgun sequence.
ACCESSION   DATDBY010000664 DATDBY010000000
VERSION     DATDBY010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_821855"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..468)
                     /locus_tag="VIT19_12475"
     CDS             complement(1..468)
                     /locus_tag="VIT19_12475"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY5839846.1"
                     /translation="MPKTEINCSVNGQARALNAFPMERLLDVLREQLHLTGTKEGCGE
                     GECGACTVLIDGQIVNSCLVPVAQVEGCDIITIEGIAVSESQLHAVQQAFIECGGAQC
                     GICTPGMVIAAVNLLEKTPNPTEPEIRNGLAGNLCRCTGYMKIFESVVRACEK"
     gene            complement(502..>2277)
                     /locus_tag="VIT19_12480"
     CDS             complement(502..>2277)
                     /locus_tag="VIT19_12480"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY5839847.1"
                     /translation="EAWAQADFIVEGEYETGAQEQLYIETNGVIATANPAEGVTVWGS
                     MQCPYYVHKALIKLFGLPEEKIRVIQTETGGGFGGKEEYPSLIAGHAALLAWKSGKPV
                     KMIYDRAEDMVATTKRHPSRIRHKMAVTGDGKLLAMEIDFVIDGGAYCTLSPVVLSRG
                     TIHAAGPYSCPNVRIQSKAVATNMPPHGAFRGFGAPQSIFGLERHMDKVAKAIGLSPE
                     EFRRRNFIKEGETTATNQVIREHVDLDGLLNRAFELTDYHAKRERFAKENGTHASGVQ
                     HARGVRTKKGIGFATFMHGAGFTGSGEVYLQSVVGAEANAEGRVKVLAASTEIGQGTN
                     TIFAQIAAEALGIDYDLIDVAQPDTGNVPNSGPTVASRTTMIVGKLVESAVLGLKQTL
                     VGSGLLKDQFTQGDFQKACAEHIAKFGPLQSTSQYQPPPGIRWDDDKYEGDAYGAFAW
                     AVYVAEISYDPLTYEAHVDDFVAVQEIGRVMNPVLAAGQIEGGVAQAIGMALYENVVW
                     EKGRMANGQMTNYIMPTAADVPPIRVFFEENRYAFGPGGAKGIGELPMDGPAPAILNA
                     IENATGISFNRIPLMPETMMKSAGA"
BASE COUNT          447 a          713 c          593 g          524 t
ORIGIN      
        1 ttacttctca cacgcgcgca caactgactc gaaaattttc atgtacccgg tacagcggca
       61 aagattcccc gcgaggccat tgcgaatttc aggctcagtc gggttcggcg ttttctcgag
      121 cagattgacg gcggcaatca ccatccccgg cgtgcagatg ccgcactggg cgccgccgca
      181 ttcgatgaat gcctgctgca ccgcgtgaag ttggctttcg ctgacggcga tgccttcaat
      241 cgttataatg tcgcagcctt cgacttgcgc caccggcacc aggcaactgt tgacgatctg
      301 gccgtcgatc aaaacggtgc acgcgccaca ctcgccttcg ccgcatcctt ctttcgtgcc
      361 cgtcagatga agctgctcgc gcagaacgtc gagcagacgc tccatgggaa aggcattgag
      421 cgccctcgcc tggccattta ctgagcagtt gatttctgtt ttaggcaaat ttttctctgc
      481 gtcctctgtg gttaaattcc tttacgcccc agccgatttc atcatcgtct ccggcatcag
      541 aggaatccga ttgaaactaa ttccggtggc attctcgatt gcattcagga ttgccggcgc
      601 cggcccatcc atgggtagtt cgccgattcc tttcgcgccc cccggaccga aggcgtacct
      661 gttctcttca aagaaaacac gaatcggcgg cacgtcagcg gccgtcggca tgatgtagtt
      721 cgtcatctgg ccattagcca tccgtccctt ttcccagacc acgttttcgt aaagcgccat
      781 cccgatggct tgggcgacgc cgccttcaat ttggcccgcc gcgagtacgg gattcatcac
      841 acggccgatc tcctgcaccg cgacgaaatc atcaacgtgc gcttcatacg tgagcggatc
      901 gtatgaaatc tcggccacgt agaccgccca ggcaaacgcc ccgtaggcat cgccttcgta
      961 tttgtcatcg tcccaacgaa tgcctggcgg tggttgatac tggctcgtcg attgcaacgg
     1021 gccgaacttc gcgatgtgtt ccgcacacgc tttttgaaaa tcaccttgcg tgaactgatc
     1081 tttcaacaag ccgctgccga ccagagtctg tttcagacca agcaccgctg attcaaccaa
     1141 cttgccgaca atcatcgtgg tgcgtgacgc gaccgtgggg ccgctgttgg gaacgttgcc
     1201 ggtatccggc tgggcaacgt cgatcagatc gtaatcaatg ccgagcgctt ccgcggcaat
     1261 ctgcgcaaag atcgtgttcg tgccctgccc aatctcagtg ctggcggcga gcactttcac
     1321 ccggccttcg gcgttagctt cagcgccgac tacggattgc agatacacct cgcccgaacc
     1381 tgtgaatccg gcgccatgca tgaaggtggc aaagccaatg ccttttttgg tacgcacgcc
     1441 tctggcgtgc tgcacgccgg aggcgtgcgt accgttctct ttcgcaaacc gctcccgctt
     1501 cgcgtgatag tcagtcaact caaacgcgcg gttcaaaagc ccgtccagat caacatgttc
     1561 gcggatcacc tgattcgttg ccgtcgtctc tccttctttg atgaagttgc ggcggcgaaa
     1621 ctcttctgga gatagaccaa ttgccttcgc aactttgtcc atgtgtcgct ctaagccgaa
     1681 gatgctctgc ggcgcgccga agccacgaaa cgcgccatgc ggcggcatgt tagtcgccac
     1741 cgctttgctc tggatgcgaa cgtttggaca ggagtacgga ccggcagcgt gaatcgtccc
     1801 gcgcgagagc acgaccggcg agagagtgca gtacgcgccc ccgtcgatca cgaaatcgat
     1861 ctccatcgcc agaagctttc cgtcacccgt tacggccatt ttgtgtcgga tgcgcgaagg
     1921 atgacgcttg gtcgttgcga ccatgtcttc ggcgcggtcg taaatcatct tcaccggctt
     1981 gcctgatttc caagccaaca aagccgcgtg gccggcaatc aacgatggat actcttcttt
     2041 gccgccaaag ccgccaccgg tttcagtttg aatcacgcga atcttttctt ccggcaggcc
     2101 gaacaactta atcaaagcct tgtgcacgta gtagggacac tgcatcgatc cccacacggt
     2161 gacgccttcc gccggattcg cggtggcaat cacgccattc gtttcaatgt agagctgttc
     2221 ctgcgcgcca gtttcatatt cgccctcgac gatgaagtcc gcctgcgccc aagcctc
//
LOCUS       DATDBY010000665         4674 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pyrinomonadaceae bacterium isolate SMAG_U134
            k141_290381, whole genome shotgun sequence.
ACCESSION   DATDBY010000665 DATDBY010000000
VERSION     DATDBY010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962337
            Sequence Read Archive: SRR25158255
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pyrinomonadaceae bacterium (soil metagenome)
  ORGANISM  Pyrinomonadaceae bacterium
            Bacteria; Acidobacteriota; Blastocatellia; Blastocatellales;
            Pyrinomonadaceae.
REFERENCE   1  (bases 1 to 4674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,502
            CDSs (total)                      :: 2,479
            Genes (coding)                    :: 2,470
            CDSs (with protein)               :: 2,470
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4674
                     /organism="Pyrinomonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290381"
                     /isolate="SMAG_U134"
                     /isolation_source="soil"
                     /db_xref="taxon:2283092"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.24 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..275)
                     /locus_tag="VIT19_12485"
     CDS             complement(<1..275)
                     /locus_tag="VIT19_12485"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5839848.1"
                     /translation="MVEAAKEFRGTERFSLRRKLGAGGMGVVYEAIDRLTNKPVALKT
                     LNRAEPEHIYRLKREFRELADVSHPNLAALYELMSSGRHWFFTMELV"
     gene            539..811
                     /locus_tag="VIT19_12490"
     CDS             539..811
                     /locus_tag="VIT19_12490"
                     /inference="COORDINATES: protein motif:HMM:NF013346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM165/GDT1 family protein"
                     /protein_id="HEY5839849.1"
                     /translation="MDWRVLLTTFGIIFLAEMGDKTQLAAMTMAADKKRPWEVFLGAS
                     LALAAVSALGILVGTALGHYLPLDWIKRVAGAAFIVIGALILIGKF"
     gene            985..1698
                     /locus_tag="VIT19_12495"
     CDS             985..1698
                     /locus_tag="VIT19_12495"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HEY5839850.1"
                     /translation="MPQTPHTEKHFTAGQTVRDTVIGMADGLTVPFALAAGLTGAIDS
                     ADIIVTAGFAEIAAGSIAMGLGGYLAAKSDAEHYAKEREREKREVVEIPDEEMREVAQ
                     VFKSYGLSDKDSAPIVEALSKNPKKWVDFMMRFELGLEKPDPKRALASALTIGGAYAV
                     GGLIPLSPYVVASVSDNITVTTALLISVTLTLIALFVFGFIKGRYTGTRPLRSALQTT
                     LIGSVAAGAAFGIARLIGG"
     gene            1713..3494
                     /locus_tag="VIT19_12500"
     CDS             1713..3494
                     /locus_tag="VIT19_12500"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5839851.1"
                     /translation="MRDRIVQIVLQLPRRTSAGALLLFVCSLTLQTTSGQQRNSELPE
                     ALIRASQNFSQRKFAEAAAAYETVIRISPENVPARNNLGICYGMLERYEKAAAEFRGA
                     VGLSPGTPELHLNLGISYLLLARNQDALKSFEEALKLKPNWMAAEVNIGLARTRLGQY
                     DAAIEIFNQALKRAPNNVALMSLIASAHSLADNDLASVQVLTQVALIKPDSAEAYFNL
                     GLAYYRAARHADAIEAFQKGVRLRADEPVVKYFLGMLYADQGDHAKAIGSLREAIALA
                     PQIEAAHFALGMSYARTGQWEKSLAAFEEVIRLQPDLAEAHMKKAVALGALGRRREMI
                     EALKIYVRLEPNDPEGHFQLGNEYMITGEFRKAVESLEEALRLKPDHQMAQNRLGITR
                     ARIELEPKLNGLERQAESRPNDPAAIGQLAHAYYVLGRFDEAEKYYKKLIELMPDDFQ
                     PHNLLAINYSEAGRYSDAIGQYKKAISIKPHHVLYFSLARSYAVLGKQEEVIAALKKA
                     LEMKPTFTLALYDIGVAYSVLGKHQDSLDAFKRLVEIEPRNAEAHLKVGLEYLSLGNK
                     EAAIQQYHILKEFAPGPAQELYSVIHR"
     gene            3505..4263
                     /locus_tag="VIT19_12505"
     CDS             3505..4263
                     /locus_tag="VIT19_12505"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEY5839852.1"
                     /translation="MNLHVGTSGYSYKEWKGNFYPEDLPAKEMLAYYSRRLPAVEINN
                     TFYRLPQPGMVENWRDQVPETFRFSIKATQRITHIKRLKNCAEETKYLIETASLLRER
                     LGVVLFQLPPNSKKDLERLREFLDCLPEQTRAAFEFRNESWLDDETLELLRQKNFALV
                     VSDTDEKPLTSITNTADWGYLRLRKTAYSDQELSDWMKRVHEQKWKDAYVFFKHEDEG
                     VGPKLAAKFLALSEPPAARGPRAGIPRGVQDAGG"
     gene            complement(4326..>4674)
                     /locus_tag="VIT19_12510"
     CDS             complement(4326..>4674)
                     /locus_tag="VIT19_12510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5839853.1"
                     /translation="FDDTGYVDLNSGRVFNASVQRYDVMIGPRFNARNRVATPFAHAL
                     FGITHMRGNFDDRLSSHKRSDTAFAMAFGGGVDIHAGDHIDIRPIMVDWVPTFFNGKR
                     QDNFRVGAGVKIK"
BASE COUNT         1079 a         1261 c         1327 g         1007 t
ORIGIN      
        1 tggacgagtt ccatcgtgaa aaaccagtga cgccctgacg acatcaactc gtaaagcgcg
       61 gccaggttcg gatgtgaaac gtcggcgagt tcgcggaact cgcgcttcag gcgatagatg
      121 tgctccggtt cggcgcgatt cagagttttc agcgccaccg gtttatttgt cagccgatcg
      181 attgcttcgt acaccacgcc catcccgccg gcgccgagtt tgcggcgcag actgaagcgt
      241 tcagtcccgc gaaattcttt ggctgcttcg accatggtcc ggcgatgtct atttactttg
      301 cgatactttg cgagctttgc gtctagtcag acgcacctgc tgtagcgggt ggttgaactt
      361 cgtaactagt ccgcggtaat gactcgcgat caaccgcccg ctaccgcagg gagccaggac
      421 gcaaagaaac gcaaaggaag acaaggcggc gcgagtgatt gacagatgcg attgtgcctt
      481 acatgatttg ccgcgatcaa tgttttgacc gcccacggcg agactggaag gagttcacat
      541 ggactggcgc gtgctgctca caaccttcgg catcattttc ctggcagaga tgggagacaa
      601 gacgcaactc gcggcgatga ccatggcggc tgacaagaaa cggccgtggg aagttttcct
      661 cggcgcgtcg ttggcgttgg ccgcggtctc ggctctcggc attctggtcg gcacggcgct
      721 cggtcattac ctgccgctcg actggattaa gcgcgtggcc ggcgcggcat tcatagtgat
      781 cggggctctc attctgattg ggaagtttta gaaatttgac atttggcatc tgacatttct
      841 cattttgata tttaccactt ggttttaccg tgattggccg aactctcgcg aggcgtgtaa
      901 gcgcaaatag aaatgaccaa tgccaaatct caaataccag atggcaaatg agtttttgat
      961 cgcgctttaa gcgcaacaac cgcaatgccg cagacgccac acacggaaaa acacttcacg
     1021 gccggacaga ctgttcgcga cactgtgatc ggcatggccg atggcttaac cgtgcctttc
     1081 gcgctggccg caggattgac cggcgccatt gattcggcgg acatcattgt gacggcaggc
     1141 tttgctgaga ttgccgccgg ttcgatcgcg atgggtctcg gtggatatct cgcggcgaag
     1201 agcgacgccg agcactacgc gaaggaacgc gagcgcgaga agcgcgaagt tgtagagatt
     1261 cccgacgaag agatgcgcga agtcgcacag gtattcaaat cctacggctt gagtgacaaa
     1321 gacagcgccc cgatcgtcga agcgctctcg aaaaatccga agaagtgggt cgatttcatg
     1381 atgcgtttcg agctgggcct ggagaagccc gatccgaaac gtgccctcgc cagcgccctg
     1441 acgatcggcg gtgcgtatgc ggtgggaggc ttgattccac tctctcctta cgtcgttgcg
     1501 tccgtttccg acaacattac tgtgacgacg gccctgttaa tttccgtgac tctgacgctg
     1561 atcgcgctgt ttgtcttcgg cttcatcaag ggtcgctaca ccgggacccg gccactccga
     1621 agcgcgttgc aaacgacgct gatcggaagc gttgcggcgg gtgcggcgtt cggaattgcg
     1681 agattgattg ggggatagtc taaaggcgca aaatgagaga cagaatcgtg cagatagtct
     1741 tgcaactgcc gaggcgaact tcagcgggtg cgcttctgtt gttcgtttgt tcgctcactc
     1801 tccagacaac ctcggggcaa caaagaaact ctgaacttcc tgaagcttta attcgcgcct
     1861 ctcaaaattt ctctcaaagg aagtttgccg aagccgcagc ggcttacgag accgttatta
     1921 ggatcagccc tgaaaatgtt cctgcgcgta acaaccttgg tatctgttat ggaatgctcg
     1981 agcgctacga aaaagcagcg gctgaattcc ggggagcggt cggtctgagt ccgggcacac
     2041 ctgagctgca tctcaatttg ggaatttcct atctcctcct ggctcgaaat caggatgcgc
     2101 tgaaaagctt tgaggaggcc ctcaagctaa agccgaactg gatggcggcc gaggtcaaca
     2161 tcggcctcgc tcgcacacgt ctcggtcaat atgatgctgc gatcgaaatc ttcaatcagg
     2221 cgctaaagcg cgcgccgaac aatgttgctc tgatgagtct tatcgccagc gcgcactctt
     2281 tagccgacaa cgatttggcg tccgttcaag tattgaccca ggtggcgcta atcaagccag
     2341 actcggcaga agcatatttc aacttgggac tggcgtatta ccgcgccgcg cgccatgccg
     2401 acgcaattga ggcttttcag aagggcgttc ggctgcgcgc ggatgagcca gtcgtcaagt
     2461 actttctggg aatgttgtat gccgaccaag gtgatcacgc taaagccatc gggtcgttac
     2521 gggaagcgat tgctctagca ccgcagattg aagcggcgca tttcgcgctc ggaatgtcgt
     2581 atgcgcggac cggtcagtgg gaaaaatcgc tcgctgcatt tgaggaagta attcgcctac
     2641 agccggatct ggctgaggcc cacatgaaaa aagccgtcgc gctgggtgct ctgggccgcc
     2701 gccgggaaat gatcgaggcg ctgaagatat atgtccggct cgagccgaac gatcccgaag
     2761 gacactttca gctcggaaac gaatacatga tcaccggcga atttcggaag gctgtcgagt
     2821 cgctcgaaga agcgttgcgc ctcaaaccgg atcaccaaat ggcgcaaaac cggctgggga
     2881 ttacgcgcgc gcgaattgaa ctggaaccta aactcaacgg attagaacgt caggccgaat
     2941 cacggccaaa cgatccagcc gcgatcgggc aactcgcgca cgcttattac gtgctgggca
     3001 gattcgacga agccgaaaag tattacaaaa agctgattga actcatgccg gatgacttcc
     3061 agccgcacaa cctgctcgca attaattatt ccgaagccgg tcgttacagc gacgcaattg
     3121 ggcagtacaa gaaagctatc tcgatcaaac ctcaccatgt cctctacttc agtctcgcgc
     3181 gctcctatgc cgtgctcgga aaacaagaag aggtgatcgc cgcgttgaaa aaggctttag
     3241 agatgaaacc aacctttacg ttagcactct atgatatcgg cgttgcgtat tcggttctgg
     3301 gtaagcatca agactcgctg gacgcgttca aacgactggt tgagatagag cctcgcaatg
     3361 ccgaggcaca cctgaaggtc ggacttgaat acttaagcct ggggaacaaa gaagcggcta
     3421 ttcagcaata ccatatcttg aaggagttcg ctccgggacc ggcgcaggaa ctctatagcg
     3481 ttattcacag atgatcggcc tgctatgaat ctccacgtcg gcaccagcgg ttacagctac
     3541 aaagaatgga agggcaattt ctatcccgag gatttgcccg cgaaagagat gctcgcctac
     3601 tactcgcggc gtctacccgc cgttgagatc aacaacacct tctatcggtt gccgcagccc
     3661 ggcatggttg agaattggag agatcaggtc cctgaaactt ttcgcttctc aatcaaagcc
     3721 acgcagcgca tcacccacat taagcggctg aagaactgcg ctgaggaaac gaagtatctg
     3781 atcgagacgg cgtcactgct gcgtgaaaga ttaggcgtcg tgttgtttca gcttccgccg
     3841 aattcgaaaa aggatctgga acggttgcgc gagtttctcg actgcctgcc ggaacagacg
     3901 cgcgccgcgt tcgagtttcg caacgaatcg tggctcgacg acgaaacact tgagcttctg
     3961 agacagaaga attttgcgct cgtcgtgtcg gacacggacg agaagccgct cacgtcaatc
     4021 acaaacacgg ctgactgggg ttatttgcgt ctgcgcaaga ctgcgtattc cgaccaggag
     4081 ttgtcggact ggatgaagcg tgtacacgag cagaaatgga aagacgccta cgtctttttc
     4141 aagcatgaag acgaaggcgt cggaccgaag ttagcggcaa agttcctggc gttgtcagaa
     4201 ccacctgcgg cgcggggtcc ccgcgcgggc atcccgcgcg gggtgcagga tgcgggtggt
     4261 tgaactttgc ccaatctaca accgcccgct accgcaggcg gttctgactt ccttttacaa
     4321 cgagcttact taatcttaac gcccgcgccg acgcggaagt tatcctgccg cttgccgtta
     4381 aagaacgtcg gcacccaatc gaccatgatc ggccggatgt cgatgtggtc gcccgcgtga
     4441 atgtccacgc cgccgccgaa cgccatcgcg aatgccgtat cggatctctt gtgcgatgac
     4501 agacgatcgt cgaagtttcc gcgcatgtgc gtaatgccga acaaggcgtg cgcaaacggt
     4561 gtggcgacgc ggtttcgcgc attgaagcgc ggtccgatca tcacatcgta acgctgcacg
     4621 ctcgcattga agacgcggcc actattgaga tcaacgtaac ccgtgtcgtc aaag
//
